Query psy316
Match_columns 341
No_of_seqs 225 out of 2433
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 17:55:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy316.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/316hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tri_A Pyrroline-5-carboxylate 100.0 1.5E-49 5.3E-54 371.4 28.7 257 64-341 3-262 (280)
2 3gt0_A Pyrroline-5-carboxylate 100.0 6.3E-46 2.2E-50 340.3 23.1 246 63-328 1-247 (247)
3 2izz_A Pyrroline-5-carboxylate 100.0 2.7E-39 9.3E-44 307.6 29.0 259 64-340 22-283 (322)
4 2ahr_A Putative pyrroline carb 100.0 3.7E-37 1.3E-41 283.3 27.8 250 64-341 3-253 (259)
5 2rcy_A Pyrroline carboxylate r 100.0 2.6E-36 9.1E-41 277.7 29.3 248 65-340 5-253 (262)
6 1yqg_A Pyrroline-5-carboxylate 100.0 1.9E-35 6.4E-40 272.1 27.1 249 65-340 1-251 (263)
7 2f1k_A Prephenate dehydrogenas 100.0 1.4E-29 4.7E-34 235.0 17.5 243 65-340 1-266 (279)
8 3c24_A Putative oxidoreductase 100.0 2.4E-28 8E-33 228.0 17.6 241 63-334 10-272 (286)
9 2g5c_A Prephenate dehydrogenas 99.9 4.4E-27 1.5E-31 218.5 11.1 238 65-334 2-260 (281)
10 3b1f_A Putative prephenate deh 99.9 1.7E-26 5.7E-31 215.5 14.5 238 64-334 6-268 (290)
11 2pv7_A T-protein [includes: ch 99.9 8E-26 2.7E-30 212.4 19.2 225 63-334 20-256 (298)
12 3ggo_A Prephenate dehydrogenas 99.9 6.1E-26 2.1E-30 215.0 14.3 233 62-326 31-282 (314)
13 3fr7_A Putative ketol-acid red 99.9 1.8E-25 6E-30 219.3 16.1 205 65-290 55-295 (525)
14 3ktd_A Prephenate dehydrogenas 99.9 2.1E-24 7.2E-29 206.3 15.5 225 62-326 6-261 (341)
15 2i76_A Hypothetical protein; N 99.9 2.1E-24 7.1E-29 200.5 10.3 223 63-326 1-235 (276)
16 1np3_A Ketol-acid reductoisome 99.9 3.8E-23 1.3E-27 197.6 17.5 220 64-314 16-264 (338)
17 4gbj_A 6-phosphogluconate dehy 99.9 1.3E-21 4.5E-26 183.7 19.3 228 63-324 4-245 (297)
18 3obb_A Probable 3-hydroxyisobu 99.9 1.5E-21 5.1E-26 183.6 19.0 233 65-324 4-250 (300)
19 1vpd_A Tartronate semialdehyde 99.9 1.6E-21 5.4E-26 182.3 18.8 242 63-337 4-265 (299)
20 2uyy_A N-PAC protein; long-cha 99.9 3.6E-21 1.2E-25 181.6 18.6 241 64-339 30-292 (316)
21 3l6d_A Putative oxidoreductase 99.9 2.8E-20 9.7E-25 175.2 23.5 240 63-339 8-271 (306)
22 3d1l_A Putative NADP oxidoredu 99.9 1.6E-21 5.6E-26 179.4 14.6 200 64-287 10-220 (266)
23 1yb4_A Tartronic semialdehyde 99.9 4.2E-21 1.4E-25 178.9 15.9 238 65-339 4-264 (295)
24 2cvz_A Dehydrogenase, 3-hydrox 99.8 3.1E-21 1.1E-25 179.1 11.4 238 65-339 2-258 (289)
25 3cky_A 2-hydroxymethyl glutara 99.8 1E-20 3.5E-25 176.9 14.9 242 64-339 4-267 (301)
26 3qsg_A NAD-binding phosphogluc 99.8 9.5E-20 3.2E-24 172.1 20.4 241 64-339 24-280 (312)
27 2ew2_A 2-dehydropantoate 2-red 99.8 5.4E-20 1.8E-24 172.3 18.5 190 63-270 2-240 (316)
28 3g0o_A 3-hydroxyisobutyrate de 99.8 1.8E-19 6.1E-24 169.3 19.2 197 63-282 6-219 (303)
29 1i36_A Conserved hypothetical 99.8 1.1E-19 3.8E-24 166.8 17.1 231 65-339 1-244 (264)
30 3pdu_A 3-hydroxyisobutyrate de 99.8 1.5E-19 5.2E-24 168.4 17.7 238 65-337 2-261 (287)
31 3doj_A AT3G25530, dehydrogenas 99.8 1.1E-18 3.6E-23 164.7 23.1 195 64-281 21-230 (310)
32 1z82_A Glycerol-3-phosphate de 99.8 5.3E-19 1.8E-23 168.3 20.3 196 60-276 10-239 (335)
33 4huj_A Uncharacterized protein 99.8 7.5E-20 2.6E-24 164.3 12.8 148 64-232 23-194 (220)
34 3pef_A 6-phosphogluconate dehy 99.8 1E-18 3.6E-23 162.7 21.0 194 65-281 2-210 (287)
35 2h78_A Hibadh, 3-hydroxyisobut 99.8 2.1E-19 7.1E-24 168.4 15.1 198 65-284 4-215 (302)
36 2p4q_A 6-phosphogluconate dehy 99.8 1.1E-18 3.9E-23 174.5 21.3 200 59-279 5-228 (497)
37 2gf2_A Hibadh, 3-hydroxyisobut 99.8 1.5E-19 5E-24 168.6 13.7 190 65-279 1-207 (296)
38 2qyt_A 2-dehydropantoate 2-red 99.8 1.8E-19 6.3E-24 169.2 14.2 198 63-279 7-259 (317)
39 3k96_A Glycerol-3-phosphate de 99.8 5.5E-18 1.9E-22 162.9 24.7 248 64-338 29-332 (356)
40 4dll_A 2-hydroxy-3-oxopropiona 99.8 1.3E-18 4.5E-23 164.8 19.8 195 63-281 30-238 (320)
41 2dpo_A L-gulonate 3-dehydrogen 99.8 3.9E-18 1.3E-22 161.6 19.6 194 65-281 7-228 (319)
42 2zyd_A 6-phosphogluconate dehy 99.8 2.1E-18 7.1E-23 172.0 18.5 195 64-279 15-233 (480)
43 3qha_A Putative oxidoreductase 99.8 6.3E-18 2.2E-22 158.3 19.1 194 63-280 14-225 (296)
44 1jay_A Coenzyme F420H2:NADP+ o 99.8 2E-18 6.7E-23 153.3 14.2 170 65-256 1-200 (212)
45 3dtt_A NADP oxidoreductase; st 99.8 4.8E-18 1.6E-22 154.9 15.4 154 63-235 18-213 (245)
46 4e12_A Diketoreductase; oxidor 99.8 2E-17 7E-22 153.9 19.8 193 65-280 5-225 (283)
47 1ks9_A KPA reductase;, 2-dehyd 99.8 3.8E-18 1.3E-22 158.0 14.1 203 65-279 1-233 (291)
48 3hn2_A 2-dehydropantoate 2-red 99.8 1.7E-17 5.7E-22 156.5 17.9 166 63-249 1-204 (312)
49 1f0y_A HCDH, L-3-hydroxyacyl-C 99.8 4.1E-17 1.4E-21 153.0 20.1 154 65-235 16-201 (302)
50 2iz1_A 6-phosphogluconate dehy 99.8 3.4E-17 1.2E-21 163.1 19.8 195 64-279 5-224 (474)
51 1yj8_A Glycerol-3-phosphate de 99.8 4.2E-17 1.4E-21 157.5 19.9 164 63-236 20-215 (375)
52 1evy_A Glycerol-3-phosphate de 99.7 1.7E-17 5.9E-22 159.5 15.6 161 63-236 13-199 (366)
53 4e21_A 6-phosphogluconate dehy 99.7 1.2E-16 4.2E-21 153.6 21.1 196 64-280 22-272 (358)
54 4ezb_A Uncharacterized conserv 99.7 2.6E-16 8.7E-21 148.9 20.8 190 63-279 23-231 (317)
55 1x0v_A GPD-C, GPDH-C, glycerol 99.7 2.5E-16 8.4E-21 150.5 20.6 158 65-236 9-198 (354)
56 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.7 1.1E-16 3.7E-21 159.6 18.2 194 65-279 2-222 (478)
57 2pgd_A 6-phosphogluconate dehy 99.7 1.2E-16 4E-21 159.5 17.7 194 65-279 3-221 (482)
58 4gwg_A 6-phosphogluconate dehy 99.7 5.7E-16 1.9E-20 154.1 22.2 195 64-278 4-222 (484)
59 2yjz_A Metalloreductase steap4 99.6 5.1E-19 1.8E-23 157.0 0.0 146 62-231 17-177 (201)
60 1txg_A Glycerol-3-phosphate de 99.7 2.4E-16 8E-21 149.1 16.6 158 65-236 1-181 (335)
61 3mog_A Probable 3-hydroxybutyr 99.7 8E-16 2.7E-20 153.4 17.5 152 65-234 6-184 (483)
62 1zej_A HBD-9, 3-hydroxyacyl-CO 99.7 3E-15 1E-19 140.0 18.6 188 63-281 11-208 (293)
63 3k6j_A Protein F01G10.3, confi 99.7 1.4E-14 4.7E-19 143.0 23.8 189 64-278 54-267 (460)
64 3hwr_A 2-dehydropantoate 2-red 99.7 8.8E-16 3E-20 145.2 14.1 169 63-249 18-215 (318)
65 3i83_A 2-dehydropantoate 2-red 99.7 2.1E-15 7.3E-20 142.5 16.5 166 63-247 1-204 (320)
66 3ghy_A Ketopantoate reductase 99.6 7.8E-15 2.7E-19 139.5 18.8 165 64-248 3-223 (335)
67 2vns_A Metalloreductase steap3 99.6 5.8E-15 2E-19 131.9 13.0 150 63-235 27-194 (215)
68 3gg2_A Sugar dehydrogenase, UD 99.6 1.3E-14 4.6E-19 143.4 16.9 199 63-278 1-248 (450)
69 3dfu_A Uncharacterized protein 99.6 5.2E-15 1.8E-19 133.6 12.4 151 63-258 5-156 (232)
70 2raf_A Putative dinucleotide-b 99.6 9.4E-15 3.2E-19 130.0 13.9 135 63-235 18-176 (209)
71 3ego_A Probable 2-dehydropanto 99.6 1.3E-14 4.6E-19 136.4 14.8 164 63-248 1-198 (307)
72 1wdk_A Fatty oxidation complex 99.6 6.1E-14 2.1E-18 146.0 20.9 187 64-277 314-528 (715)
73 3g17_A Similar to 2-dehydropan 99.6 1.5E-14 5E-19 135.2 12.5 150 63-236 1-161 (294)
74 1zcj_A Peroxisomal bifunctiona 99.6 2.8E-13 9.7E-18 134.4 21.4 154 64-235 37-215 (463)
75 4a7p_A UDP-glucose dehydrogena 99.5 6.2E-13 2.1E-17 131.2 20.9 197 63-279 7-253 (446)
76 3pid_A UDP-glucose 6-dehydroge 99.5 8.8E-13 3E-17 129.3 21.7 186 64-278 36-269 (432)
77 2wtb_A MFP2, fatty acid multif 99.5 7.1E-13 2.4E-17 138.1 21.9 186 65-277 313-526 (725)
78 1mv8_A GMD, GDP-mannose 6-dehy 99.5 9.5E-14 3.2E-18 136.8 14.1 197 65-278 1-246 (436)
79 2q3e_A UDP-glucose 6-dehydroge 99.5 1E-12 3.5E-17 130.5 17.9 201 64-279 5-258 (467)
80 2o3j_A UDP-glucose 6-dehydroge 99.4 2.1E-12 7.1E-17 128.8 17.2 206 63-279 8-264 (481)
81 2y0c_A BCEC, UDP-glucose dehyd 99.4 4.9E-12 1.7E-16 125.9 18.7 200 63-277 7-257 (478)
82 3ado_A Lambda-crystallin; L-gu 99.4 1.1E-11 3.8E-16 116.9 18.6 153 64-233 6-186 (319)
83 1dlj_A UDP-glucose dehydrogena 99.4 9.1E-12 3.1E-16 121.4 18.1 194 65-278 1-240 (402)
84 3g79_A NDP-N-acetyl-D-galactos 99.4 8.6E-12 2.9E-16 123.9 17.5 195 64-278 18-271 (478)
85 4fgw_A Glycerol-3-phosphate de 99.4 2.8E-11 9.7E-16 117.0 18.4 160 64-236 34-234 (391)
86 3ojo_A CAP5O; rossmann fold, c 99.3 7.1E-11 2.4E-15 115.8 17.7 197 63-278 10-251 (431)
87 3c7a_A Octopine dehydrogenase; 99.2 1.4E-11 4.7E-16 119.8 9.7 98 63-167 1-122 (404)
88 1bg6_A N-(1-D-carboxylethyl)-L 99.2 2.2E-11 7.4E-16 115.9 10.6 103 64-173 4-122 (359)
89 3zwc_A Peroxisomal bifunctiona 99.1 2.1E-09 7.2E-14 111.9 20.5 153 64-233 316-491 (742)
90 2hk9_A Shikimate dehydrogenase 99.1 8.5E-11 2.9E-15 108.7 5.0 121 64-201 129-250 (275)
91 3ulk_A Ketol-acid reductoisome 99.0 2.3E-08 7.7E-13 96.9 18.9 232 60-314 33-291 (491)
92 3u62_A Shikimate dehydrogenase 99.0 2E-10 6.8E-15 105.1 4.4 123 66-204 110-233 (253)
93 2gcg_A Glyoxylate reductase/hy 99.0 3.4E-10 1.2E-14 107.5 5.7 102 64-174 155-261 (330)
94 2w2k_A D-mandelate dehydrogena 99.0 4.8E-10 1.6E-14 107.2 5.7 103 64-174 163-271 (348)
95 2dbq_A Glyoxylate reductase; D 98.9 7.4E-10 2.5E-14 105.3 4.2 102 64-174 150-255 (334)
96 1hyh_A L-hicdh, L-2-hydroxyiso 98.9 1.7E-09 5.7E-14 101.6 6.6 95 65-166 2-127 (309)
97 3ba1_A HPPR, hydroxyphenylpyru 98.9 1.3E-09 4.3E-14 103.6 5.6 98 64-174 164-266 (333)
98 1gdh_A D-glycerate dehydrogena 98.9 1.6E-09 5.4E-14 102.4 5.9 103 63-174 145-253 (320)
99 1ygy_A PGDH, D-3-phosphoglycer 98.9 2.7E-09 9.1E-14 107.5 7.9 101 64-174 142-247 (529)
100 4dgs_A Dehydrogenase; structur 98.9 5.2E-09 1.8E-13 99.6 9.2 99 63-174 170-273 (340)
101 3vtf_A UDP-glucose 6-dehydroge 98.8 1E-07 3.4E-12 93.6 17.2 199 65-278 22-264 (444)
102 2i99_A MU-crystallin homolog; 98.8 2.8E-09 9.7E-14 100.2 5.7 88 64-161 135-226 (312)
103 1mx3_A CTBP1, C-terminal bindi 98.8 2.8E-09 9.6E-14 101.8 5.5 102 64-174 168-274 (347)
104 1lss_A TRK system potassium up 98.8 1.5E-08 5.2E-13 82.5 9.2 94 65-166 5-107 (140)
105 3gvx_A Glycerate dehydrogenase 98.8 4.2E-09 1.4E-13 98.1 5.9 99 63-174 121-224 (290)
106 2j6i_A Formate dehydrogenase; 98.8 4.1E-09 1.4E-13 101.3 5.8 103 64-174 164-272 (364)
107 1wwk_A Phosphoglycerate dehydr 98.8 6.5E-09 2.2E-13 97.6 6.4 103 63-174 141-247 (307)
108 2d5c_A AROE, shikimate 5-dehyd 98.8 2E-09 6.7E-14 98.6 2.7 116 66-200 118-236 (263)
109 3jtm_A Formate dehydrogenase, 98.8 3.5E-09 1.2E-13 101.2 4.5 103 64-174 164-271 (351)
110 2d0i_A Dehydrogenase; structur 98.8 2.5E-09 8.5E-14 101.6 3.3 101 64-174 146-250 (333)
111 2ekl_A D-3-phosphoglycerate de 98.7 4.6E-09 1.6E-13 98.9 4.7 103 63-174 141-247 (313)
112 3ezy_A Dehydrogenase; structur 98.7 2.4E-08 8.3E-13 94.7 9.2 79 63-144 1-84 (344)
113 2nac_A NAD-dependent formate d 98.7 5.4E-09 1.9E-13 101.2 4.6 103 64-174 191-298 (393)
114 3oj0_A Glutr, glutamyl-tRNA re 98.7 4.9E-09 1.7E-13 87.0 3.7 88 64-162 21-111 (144)
115 2g1u_A Hypothetical protein TM 98.7 1.2E-07 4.1E-12 79.5 12.1 96 63-165 18-122 (155)
116 3euw_A MYO-inositol dehydrogen 98.7 5.4E-08 1.8E-12 92.3 10.9 78 64-144 4-85 (344)
117 3gg9_A D-3-phosphoglycerate de 98.7 1E-08 3.4E-13 98.1 5.8 102 64-174 160-266 (352)
118 4g2n_A D-isomer specific 2-hyd 98.7 1.3E-08 4.3E-13 97.1 6.4 102 63-174 172-278 (345)
119 4hkt_A Inositol 2-dehydrogenas 98.7 4.1E-08 1.4E-12 92.6 9.9 79 63-144 2-83 (331)
120 1qp8_A Formate dehydrogenase; 98.7 9.9E-09 3.4E-13 96.2 5.6 98 63-174 123-225 (303)
121 4e5n_A Thermostable phosphite 98.7 5.1E-09 1.8E-13 99.3 3.5 103 64-174 145-251 (330)
122 3evt_A Phosphoglycerate dehydr 98.7 1E-08 3.5E-13 96.9 5.4 103 63-174 136-242 (324)
123 2cuk_A Glycerate dehydrogenase 98.7 1.2E-08 3.9E-13 96.1 5.5 98 63-174 143-244 (311)
124 3hg7_A D-isomer specific 2-hyd 98.7 9.5E-09 3.2E-13 97.1 4.9 102 64-174 140-245 (324)
125 3pp8_A Glyoxylate/hydroxypyruv 98.7 7.1E-09 2.4E-13 97.7 4.0 102 64-174 139-244 (315)
126 2g76_A 3-PGDH, D-3-phosphoglyc 98.7 1.5E-08 5.3E-13 96.2 6.3 102 64-174 165-270 (335)
127 1a5z_A L-lactate dehydrogenase 98.7 1.3E-08 4.6E-13 95.9 5.8 95 65-166 1-121 (319)
128 1xea_A Oxidoreductase, GFO/IDH 98.7 3.9E-08 1.3E-12 92.4 8.9 79 63-144 1-83 (323)
129 1f06_A MESO-diaminopimelate D- 98.7 3.7E-10 1.3E-14 106.7 -5.1 93 64-169 3-98 (320)
130 3d4o_A Dipicolinate synthase s 98.7 2.8E-08 9.7E-13 92.4 7.6 111 64-197 155-272 (293)
131 3mz0_A Inositol 2-dehydrogenas 98.7 6E-08 2E-12 92.0 9.7 79 63-144 1-86 (344)
132 3uuw_A Putative oxidoreductase 98.7 5.2E-08 1.8E-12 90.9 9.1 78 64-144 6-86 (308)
133 2rir_A Dipicolinate synthase, 98.7 6.2E-08 2.1E-12 90.4 9.6 89 64-163 157-248 (300)
134 3db2_A Putative NADPH-dependen 98.7 4.8E-08 1.6E-12 93.0 8.7 100 63-171 4-108 (354)
135 2pi1_A D-lactate dehydrogenase 98.7 2.2E-08 7.5E-13 95.1 6.1 101 64-174 141-245 (334)
136 1lld_A L-lactate dehydrogenase 98.6 2.2E-08 7.7E-13 93.8 5.4 99 63-167 6-130 (319)
137 3fwz_A Inner membrane protein 98.6 1.5E-07 5.2E-12 77.6 9.8 93 61-162 4-106 (140)
138 2ho3_A Oxidoreductase, GFO/IDH 98.6 1.9E-07 6.5E-12 87.7 11.6 98 65-171 2-104 (325)
139 3ic5_A Putative saccharopine d 98.6 8.1E-08 2.8E-12 75.7 7.7 90 63-162 4-101 (118)
140 1y81_A Conserved hypothetical 98.6 9.5E-08 3.3E-12 79.2 8.4 95 63-173 13-112 (138)
141 2ewd_A Lactate dehydrogenase,; 98.6 7.7E-08 2.6E-12 90.5 8.6 95 64-166 4-126 (317)
142 4hy3_A Phosphoglycerate oxidor 98.6 3.4E-08 1.2E-12 94.8 6.0 103 63-174 175-281 (365)
143 1j4a_A D-LDH, D-lactate dehydr 98.6 3.9E-08 1.3E-12 93.4 6.0 100 64-174 146-250 (333)
144 3ohs_X Trans-1,2-dihydrobenzen 98.6 1.1E-07 3.9E-12 89.7 9.2 81 63-144 1-86 (334)
145 2dc1_A L-aspartate dehydrogena 98.6 1.2E-07 4E-12 85.3 8.8 80 65-162 1-82 (236)
146 3q2i_A Dehydrogenase; rossmann 98.6 1E-07 3.5E-12 90.7 8.7 79 64-144 13-95 (354)
147 3e9m_A Oxidoreductase, GFO/IDH 98.6 1.2E-07 4.1E-12 89.4 9.0 78 64-144 5-87 (330)
148 2duw_A Putative COA-binding pr 98.6 1.1E-07 3.6E-12 79.5 7.5 97 64-174 13-114 (145)
149 2yq5_A D-isomer specific 2-hyd 98.5 7.4E-08 2.5E-12 91.7 6.5 100 64-174 148-251 (343)
150 1sc6_A PGDH, D-3-phosphoglycer 98.5 8.6E-08 2.9E-12 93.3 6.7 100 63-174 144-248 (404)
151 3oet_A Erythronate-4-phosphate 98.5 1.3E-07 4.5E-12 91.0 7.8 99 64-174 119-225 (381)
152 3evn_A Oxidoreductase, GFO/IDH 98.5 2.9E-07 1E-11 86.7 10.0 77 65-144 6-87 (329)
153 2glx_A 1,5-anhydro-D-fructose 98.5 3.1E-07 1.1E-11 86.3 10.2 76 65-144 1-82 (332)
154 2o4c_A Erythronate-4-phosphate 98.5 1.4E-07 4.9E-12 90.8 7.9 99 64-174 116-222 (380)
155 3rc1_A Sugar 3-ketoreductase; 98.5 2.2E-07 7.6E-12 88.4 8.7 77 65-144 28-109 (350)
156 1dxy_A D-2-hydroxyisocaproate 98.5 1.4E-07 4.9E-12 89.4 7.0 100 64-174 145-248 (333)
157 3llv_A Exopolyphosphatase-rela 98.5 4.2E-07 1.4E-11 74.6 8.9 98 64-169 6-112 (141)
158 3c1a_A Putative oxidoreductase 98.5 3.9E-07 1.3E-11 85.3 9.7 98 63-171 9-111 (315)
159 3k5p_A D-3-phosphoglycerate de 98.5 2.1E-07 7E-12 90.6 8.0 99 64-174 156-259 (416)
160 3ec7_A Putative dehydrogenase; 98.5 4E-07 1.4E-11 86.9 9.7 78 64-144 23-107 (357)
161 1xdw_A NAD+-dependent (R)-2-hy 98.5 1.4E-07 4.6E-12 89.5 5.8 100 64-174 146-249 (331)
162 1x7d_A Ornithine cyclodeaminas 98.5 5E-08 1.7E-12 93.2 2.8 89 65-160 130-225 (350)
163 3cea_A MYO-inositol 2-dehydrog 98.5 5.6E-07 1.9E-11 85.0 10.1 78 64-144 8-91 (346)
164 2hjr_A Malate dehydrogenase; m 98.4 2.9E-07 9.8E-12 87.1 7.4 96 62-165 12-135 (328)
165 3l4b_C TRKA K+ channel protien 98.4 4.5E-07 1.5E-11 80.2 8.2 91 65-162 1-100 (218)
166 1pzg_A LDH, lactate dehydrogen 98.4 5.9E-07 2E-11 85.1 9.4 96 63-165 8-136 (331)
167 3m2t_A Probable dehydrogenase; 98.4 1.1E-06 3.9E-11 83.8 11.3 77 65-144 6-88 (359)
168 1tlt_A Putative oxidoreductase 98.4 6.4E-07 2.2E-11 83.9 9.0 97 65-170 6-106 (319)
169 2z2v_A Hypothetical protein PH 98.4 3.6E-07 1.2E-11 87.8 7.3 87 64-161 16-108 (365)
170 3c85_A Putative glutathione-re 98.4 8.7E-07 3E-11 76.1 8.7 90 64-162 39-140 (183)
171 3e18_A Oxidoreductase; dehydro 98.4 1.8E-06 6E-11 82.5 11.2 76 65-144 6-85 (359)
172 2v6b_A L-LDH, L-lactate dehydr 98.4 7.2E-07 2.5E-11 83.4 8.1 96 65-166 1-121 (304)
173 3moi_A Probable dehydrogenase; 98.4 7.7E-07 2.6E-11 85.8 8.2 79 63-144 1-84 (387)
174 1guz_A Malate dehydrogenase; o 98.4 1.1E-06 3.8E-11 82.4 9.1 94 65-165 1-122 (310)
175 2hmt_A YUAA protein; RCK, KTN, 98.3 1.5E-06 5E-11 70.8 8.7 66 65-135 7-81 (144)
176 1ydw_A AX110P-like protein; st 98.3 1.2E-06 4E-11 83.6 9.3 78 64-144 6-91 (362)
177 3qy9_A DHPR, dihydrodipicolina 98.3 1.6E-06 5.5E-11 78.5 9.1 89 64-171 3-93 (243)
178 3don_A Shikimate dehydrogenase 98.3 6.8E-07 2.3E-11 82.6 6.6 94 64-162 117-211 (277)
179 3f4l_A Putative oxidoreductase 98.3 1E-06 3.6E-11 83.4 7.5 80 63-144 1-85 (345)
180 1v8b_A Adenosylhomocysteinase; 98.3 1.3E-06 4.5E-11 86.4 8.1 98 64-171 257-357 (479)
181 4had_A Probable oxidoreductase 98.3 1.3E-06 4.5E-11 82.7 7.8 77 64-143 23-105 (350)
182 1h6d_A Precursor form of gluco 98.3 2.1E-06 7.3E-11 84.1 9.6 78 64-144 83-170 (433)
183 1ur5_A Malate dehydrogenase; o 98.3 3.2E-06 1.1E-10 79.2 9.8 95 63-165 1-123 (309)
184 1iuk_A Hypothetical protein TT 98.2 2.5E-06 8.5E-11 70.7 7.0 96 64-174 13-114 (140)
185 3d64_A Adenosylhomocysteinase; 98.2 2.4E-06 8.1E-11 84.9 8.0 97 64-173 277-378 (494)
186 2p2s_A Putative oxidoreductase 98.2 4.2E-06 1.4E-10 78.9 9.4 77 64-144 4-86 (336)
187 1omo_A Alanine dehydrogenase; 98.2 8.7E-07 3E-11 83.6 4.5 87 64-160 125-216 (322)
188 1u8x_X Maltose-6'-phosphate gl 98.2 3.4E-06 1.2E-10 83.5 8.8 105 65-174 29-186 (472)
189 3fef_A Putative glucosidase LP 98.2 2.6E-06 9.1E-11 83.7 7.9 70 64-134 5-85 (450)
190 3bio_A Oxidoreductase, GFO/IDH 98.2 5E-06 1.7E-10 77.6 9.4 82 64-159 9-94 (304)
191 2d59_A Hypothetical protein PH 98.2 3.5E-06 1.2E-10 70.1 7.4 95 64-174 22-121 (144)
192 1t2d_A LDH-P, L-lactate dehydr 98.2 2.2E-06 7.4E-11 80.9 6.7 93 65-165 5-130 (322)
193 3h9u_A Adenosylhomocysteinase; 98.2 2E-06 7E-11 83.8 6.6 98 64-171 211-311 (436)
194 3hdj_A Probable ornithine cycl 98.2 1E-06 3.5E-11 82.8 4.2 84 65-160 122-212 (313)
195 1obb_A Maltase, alpha-glucosid 98.1 1.2E-05 4.1E-10 79.7 11.6 71 64-134 3-87 (480)
196 3v5n_A Oxidoreductase; structu 98.1 7E-06 2.4E-10 79.9 9.2 78 64-144 37-130 (417)
197 3p2y_A Alanine dehydrogenase/p 98.1 1.7E-06 5.9E-11 83.1 4.7 85 65-161 185-302 (381)
198 1oju_A MDH, malate dehydrogena 98.1 7.7E-06 2.6E-10 76.1 8.8 95 65-166 1-123 (294)
199 1ldn_A L-lactate dehydrogenase 98.1 3.3E-06 1.1E-10 79.4 6.2 97 63-165 5-127 (316)
200 3pqe_A L-LDH, L-lactate dehydr 98.1 6.1E-06 2.1E-10 77.9 8.1 97 64-166 5-127 (326)
201 4h3v_A Oxidoreductase domain p 98.1 3.5E-06 1.2E-10 80.3 6.5 81 63-143 4-94 (390)
202 4gqa_A NAD binding oxidoreduct 98.1 6.5E-06 2.2E-10 79.8 8.4 80 64-143 26-115 (412)
203 3abi_A Putative uncharacterize 98.1 5.7E-06 1.9E-10 79.1 7.7 75 64-143 16-96 (365)
204 1zh8_A Oxidoreductase; TM0312, 98.1 9.3E-06 3.2E-10 76.8 8.8 79 64-144 18-102 (340)
205 1s6y_A 6-phospho-beta-glucosid 98.1 1.7E-05 5.7E-10 78.1 10.6 106 64-174 7-167 (450)
206 3u3x_A Oxidoreductase; structu 98.1 1.5E-05 5E-10 76.1 10.0 77 64-144 26-108 (361)
207 4fb5_A Probable oxidoreductase 98.0 5.2E-06 1.8E-10 79.2 6.6 81 63-143 23-113 (393)
208 3kux_A Putative oxidoreductase 98.0 3E-05 1E-09 73.6 11.4 76 64-144 7-87 (352)
209 3ce6_A Adenosylhomocysteinase; 98.0 9.4E-06 3.2E-10 80.7 8.1 97 63-171 273-374 (494)
210 3n58_A Adenosylhomocysteinase; 98.0 1.3E-05 4.6E-10 78.1 8.9 88 64-163 247-336 (464)
211 2nu8_A Succinyl-COA ligase [AD 98.0 2.9E-05 9.8E-10 72.0 10.8 93 63-168 6-103 (288)
212 2vt3_A REX, redox-sensing tran 98.0 7.7E-06 2.6E-10 72.7 6.5 78 64-144 85-165 (215)
213 2egg_A AROE, shikimate 5-dehyd 98.0 4.9E-06 1.7E-10 77.5 5.5 69 64-135 141-215 (297)
214 2vhw_A Alanine dehydrogenase; 98.0 6.4E-06 2.2E-10 79.3 6.4 87 64-161 168-268 (377)
215 4dio_A NAD(P) transhydrogenase 98.0 8.3E-06 2.8E-10 79.0 7.1 85 65-161 191-312 (405)
216 2nvw_A Galactose/lactose metab 98.0 1.6E-05 5.5E-10 78.9 9.4 95 40-143 20-127 (479)
217 3ijp_A DHPR, dihydrodipicolina 98.0 2.7E-05 9.4E-10 72.1 10.3 99 63-170 20-128 (288)
218 3i23_A Oxidoreductase, GFO/IDH 98.0 1.2E-05 3.9E-10 76.4 7.4 77 63-144 1-85 (349)
219 1ez4_A Lactate dehydrogenase; 98.0 1.3E-05 4.6E-10 75.3 7.6 98 63-166 4-126 (318)
220 2ixa_A Alpha-N-acetylgalactosa 98.0 2.4E-05 8.4E-10 76.7 9.7 77 64-143 20-110 (444)
221 1id1_A Putative potassium chan 97.9 3.6E-05 1.2E-09 64.0 9.2 95 64-165 3-109 (153)
222 3nep_X Malate dehydrogenase; h 97.9 1.1E-05 3.8E-10 75.8 6.7 95 65-165 1-122 (314)
223 3oqb_A Oxidoreductase; structu 97.9 1.1E-05 3.7E-10 77.4 6.7 81 64-144 6-103 (383)
224 4f3y_A DHPR, dihydrodipicolina 97.9 3.8E-05 1.3E-09 70.6 9.9 98 65-171 8-114 (272)
225 3dty_A Oxidoreductase, GFO/IDH 97.9 2.3E-05 7.8E-10 75.7 8.8 78 64-144 12-105 (398)
226 1gpj_A Glutamyl-tRNA reductase 97.9 8.6E-06 3E-10 79.1 5.9 68 64-134 167-237 (404)
227 3gvp_A Adenosylhomocysteinase 97.9 1.7E-05 5.7E-10 77.2 7.8 88 64-163 220-309 (435)
228 3e82_A Putative oxidoreductase 97.9 2.5E-05 8.5E-10 74.6 8.7 75 64-144 7-87 (364)
229 3kb6_A D-lactate dehydrogenase 97.9 9E-06 3.1E-10 77.0 5.5 101 64-174 141-245 (334)
230 1y6j_A L-lactate dehydrogenase 97.9 1.3E-05 4.5E-10 75.3 6.4 96 64-165 7-127 (318)
231 3d0o_A L-LDH 1, L-lactate dehy 97.9 2.5E-05 8.4E-10 73.4 8.2 96 64-165 6-127 (317)
232 3gvi_A Malate dehydrogenase; N 97.9 1.6E-05 5.6E-10 74.9 6.5 94 64-165 7-128 (324)
233 2d4a_B Malate dehydrogenase; a 97.9 2.6E-05 9E-10 72.9 7.8 92 66-165 1-120 (308)
234 3fhl_A Putative oxidoreductase 97.9 4.7E-05 1.6E-09 72.5 9.7 74 65-144 6-85 (362)
235 2i6t_A Ubiquitin-conjugating e 97.8 2.2E-05 7.5E-10 73.3 6.9 93 65-165 15-129 (303)
236 2czc_A Glyceraldehyde-3-phosph 97.8 2E-05 6.9E-10 74.6 6.7 76 63-141 1-96 (334)
237 2zqz_A L-LDH, L-lactate dehydr 97.8 4.7E-05 1.6E-09 71.8 9.1 98 63-166 8-130 (326)
238 3p7m_A Malate dehydrogenase; p 97.8 1.9E-05 6.7E-10 74.3 6.4 94 65-165 6-126 (321)
239 4gmf_A Yersiniabactin biosynth 97.8 9.3E-06 3.2E-10 78.1 4.2 70 64-136 7-78 (372)
240 3vku_A L-LDH, L-lactate dehydr 97.8 2.5E-05 8.5E-10 73.7 6.9 96 64-165 9-129 (326)
241 2eez_A Alanine dehydrogenase; 97.8 2.5E-05 8.6E-10 74.8 6.7 91 64-161 166-266 (369)
242 1nvm_B Acetaldehyde dehydrogen 97.8 2.1E-05 7.1E-10 73.8 5.9 91 64-160 4-103 (312)
243 1dih_A Dihydrodipicolinate red 97.8 5.5E-05 1.9E-09 69.6 8.6 99 65-172 6-114 (273)
244 3tl2_A Malate dehydrogenase; c 97.8 2.7E-05 9.4E-10 73.1 6.6 94 65-165 9-131 (315)
245 3phh_A Shikimate dehydrogenase 97.8 1.1E-05 3.9E-10 74.0 3.8 89 64-162 118-210 (269)
246 3ldh_A Lactate dehydrogenase; 97.8 2.2E-05 7.5E-10 74.1 5.8 96 64-166 21-143 (330)
247 3btv_A Galactose/lactose metab 97.8 2.5E-05 8.4E-10 76.6 6.4 76 65-143 21-108 (438)
248 3ip3_A Oxidoreductase, putativ 97.8 3.6E-05 1.2E-09 72.5 6.9 77 63-144 1-87 (337)
249 1x13_A NAD(P) transhydrogenase 97.8 4.1E-05 1.4E-09 74.3 7.5 86 64-161 172-292 (401)
250 3o9z_A Lipopolysaccaride biosy 97.8 0.00013 4.4E-09 68.1 10.7 76 65-144 4-92 (312)
251 3oa2_A WBPB; oxidoreductase, s 97.8 0.00014 4.7E-09 68.2 10.7 77 64-144 3-93 (318)
252 1leh_A Leucine dehydrogenase; 97.7 2.4E-05 8.1E-10 74.9 5.4 67 64-135 173-241 (364)
253 3gdo_A Uncharacterized oxidore 97.7 0.0001 3.6E-09 70.0 9.7 74 65-144 6-85 (358)
254 2xxj_A L-LDH, L-lactate dehydr 97.7 4.1E-05 1.4E-09 71.7 6.7 95 65-165 1-120 (310)
255 2aef_A Calcium-gated potassium 97.7 5.1E-05 1.7E-09 67.5 7.0 89 62-160 7-105 (234)
256 3l9w_A Glutathione-regulated p 97.7 7.6E-05 2.6E-09 72.7 8.7 70 64-138 4-82 (413)
257 3fi9_A Malate dehydrogenase; s 97.7 8.9E-05 3E-09 70.4 9.0 70 61-132 5-84 (343)
258 2x0j_A Malate dehydrogenase; o 97.7 4E-05 1.4E-09 71.2 6.4 96 65-166 1-123 (294)
259 1oi7_A Succinyl-COA synthetase 97.7 0.0002 6.9E-09 66.3 11.1 92 64-168 7-103 (288)
260 1npy_A Hypothetical shikimate 97.7 2.2E-05 7.6E-10 72.2 4.4 67 64-135 119-186 (271)
261 2fp4_A Succinyl-COA ligase [GD 97.7 0.00033 1.1E-08 65.4 12.2 93 64-168 13-110 (305)
262 3pwz_A Shikimate dehydrogenase 97.7 2.5E-05 8.4E-10 71.9 4.2 92 64-161 120-215 (272)
263 4ew6_A D-galactose-1-dehydroge 97.7 0.00018 6.2E-09 67.6 10.1 70 65-144 26-101 (330)
264 4aj2_A L-lactate dehydrogenase 97.7 0.00013 4.6E-09 68.8 9.0 95 64-165 19-140 (331)
265 3o8q_A Shikimate 5-dehydrogena 97.6 2.1E-05 7E-10 72.8 3.0 92 64-161 126-221 (281)
266 3fbt_A Chorismate mutase and s 97.6 4E-05 1.4E-09 70.8 4.9 66 64-134 122-188 (282)
267 2b0j_A 5,10-methenyltetrahydro 97.6 0.00091 3.1E-08 61.1 13.4 164 112-290 128-299 (358)
268 2yv1_A Succinyl-COA ligase [AD 97.6 0.00041 1.4E-08 64.3 11.5 93 64-168 13-109 (294)
269 1l7d_A Nicotinamide nucleotide 97.6 0.0001 3.4E-09 71.0 7.3 86 64-161 172-294 (384)
270 1p77_A Shikimate 5-dehydrogena 97.6 2.8E-05 9.4E-10 71.4 3.0 69 64-136 119-192 (272)
271 1nyt_A Shikimate 5-dehydrogena 97.5 8.5E-05 2.9E-09 68.0 5.8 68 64-135 119-191 (271)
272 1mld_A Malate dehydrogenase; o 97.5 0.00021 7.2E-09 66.9 8.5 96 65-166 1-122 (314)
273 3jyo_A Quinate/shikimate dehyd 97.5 8.1E-05 2.8E-09 68.8 5.5 68 64-134 127-204 (283)
274 2axq_A Saccharopine dehydrogen 97.5 0.00011 3.6E-09 72.8 6.4 75 64-141 23-105 (467)
275 1j5p_A Aspartate dehydrogenase 97.5 0.0002 6.7E-09 65.0 7.4 82 63-163 11-93 (253)
276 1ys4_A Aspartate-semialdehyde 97.5 0.00015 5.3E-09 69.0 7.0 92 63-163 7-116 (354)
277 2dt5_A AT-rich DNA-binding pro 97.5 7.7E-05 2.6E-09 66.0 4.5 78 64-144 80-160 (211)
278 1b7g_O Protein (glyceraldehyde 97.5 0.0002 6.8E-09 67.9 7.3 76 65-143 2-96 (340)
279 1ff9_A Saccharopine reductase; 97.4 0.00021 7.1E-09 70.3 7.6 68 65-136 4-80 (450)
280 3upl_A Oxidoreductase; rossman 97.4 0.00011 3.7E-09 72.0 5.4 78 64-144 23-129 (446)
281 4g65_A TRK system potassium up 97.4 9E-05 3.1E-09 73.1 4.9 70 64-137 3-81 (461)
282 1lc0_A Biliverdin reductase A; 97.4 0.00041 1.4E-08 64.1 9.1 76 64-144 7-85 (294)
283 4ina_A Saccharopine dehydrogen 97.4 0.00018 6E-09 69.8 6.6 78 65-143 2-95 (405)
284 1pjc_A Protein (L-alanine dehy 97.4 0.00017 6E-09 68.7 5.9 86 65-161 168-267 (361)
285 2yv2_A Succinyl-COA synthetase 97.4 0.0011 3.8E-08 61.5 10.9 92 64-167 13-109 (297)
286 1edz_A 5,10-methylenetetrahydr 97.3 0.00015 5.2E-09 68.0 4.8 88 64-162 177-276 (320)
287 3keo_A Redox-sensing transcrip 97.3 0.00018 6.2E-09 63.6 5.0 78 64-144 84-168 (212)
288 1smk_A Malate dehydrogenase, g 97.3 0.00029 1E-08 66.3 6.4 98 63-166 7-130 (326)
289 1p9l_A Dihydrodipicolinate red 97.2 0.0018 6.2E-08 58.4 10.5 81 65-170 1-85 (245)
290 3ius_A Uncharacterized conserv 97.2 0.00024 8.2E-09 64.4 4.6 65 62-133 3-72 (286)
291 3hhp_A Malate dehydrogenase; M 97.2 0.0011 3.9E-08 61.9 9.2 96 65-166 1-123 (312)
292 1cf2_P Protein (glyceraldehyde 97.2 0.00029 1E-08 66.6 5.2 77 65-144 2-98 (337)
293 3qvo_A NMRA family protein; st 97.2 0.0009 3.1E-08 59.2 8.0 67 64-134 23-98 (236)
294 3ond_A Adenosylhomocysteinase; 97.2 0.00062 2.1E-08 67.3 7.4 88 64-163 265-354 (488)
295 2hjs_A USG-1 protein homolog; 97.2 0.00063 2.2E-08 64.4 7.1 93 63-164 5-102 (340)
296 2ozp_A N-acetyl-gamma-glutamyl 97.2 0.0011 3.8E-08 62.9 8.8 101 64-174 4-115 (345)
297 1o6z_A MDH, malate dehydrogena 97.1 0.00082 2.8E-08 62.5 7.5 95 65-165 1-123 (303)
298 1vl6_A Malate oxidoreductase; 97.1 0.00092 3.1E-08 64.1 7.8 92 64-165 192-298 (388)
299 3t4e_A Quinate/shikimate dehyd 97.1 0.00049 1.7E-08 64.4 5.2 68 64-134 148-230 (312)
300 3mtj_A Homoserine dehydrogenas 97.0 0.0015 5.1E-08 64.0 8.6 86 65-160 11-109 (444)
301 3ew7_A LMO0794 protein; Q8Y8U8 97.0 0.0026 8.9E-08 54.9 9.4 65 65-133 1-70 (221)
302 3dr3_A N-acetyl-gamma-glutamyl 97.0 0.0013 4.6E-08 62.1 8.0 102 63-174 4-122 (337)
303 1b8p_A Protein (malate dehydro 97.0 0.00077 2.6E-08 63.4 6.1 99 64-165 5-137 (329)
304 3u95_A Glycoside hydrolase, fa 97.0 0.0019 6.6E-08 63.8 9.1 68 65-132 1-84 (477)
305 2ejw_A HDH, homoserine dehydro 97.0 0.00055 1.9E-08 64.6 4.9 76 64-142 3-85 (332)
306 3do5_A HOM, homoserine dehydro 97.0 0.00055 1.9E-08 64.5 4.9 70 65-136 3-92 (327)
307 1jw9_B Molybdopterin biosynthe 97.0 0.0018 6.2E-08 58.4 8.1 35 64-101 31-65 (249)
308 3ff4_A Uncharacterized protein 97.0 0.00077 2.6E-08 54.3 5.0 94 64-174 4-102 (122)
309 1u8f_O GAPDH, glyceraldehyde-3 97.0 0.0007 2.4E-08 64.0 5.3 79 63-144 2-111 (335)
310 3tnl_A Shikimate dehydrogenase 96.9 0.001 3.4E-08 62.4 5.8 68 64-134 154-236 (315)
311 3pwk_A Aspartate-semialdehyde 96.9 0.0014 4.8E-08 62.6 6.9 93 63-163 1-97 (366)
312 1up7_A 6-phospho-beta-glucosid 96.9 0.0038 1.3E-07 60.7 10.0 68 64-132 2-81 (417)
313 2yyy_A Glyceraldehyde-3-phosph 96.9 0.0018 6.1E-08 61.4 7.4 89 63-159 1-111 (343)
314 3dhn_A NAD-dependent epimerase 96.8 0.0036 1.2E-07 54.5 8.7 67 64-134 4-77 (227)
315 3r6d_A NAD-dependent epimerase 96.8 0.0035 1.2E-07 54.6 8.2 68 63-134 4-83 (221)
316 3c8m_A Homoserine dehydrogenas 96.8 0.002 7E-08 60.6 6.8 90 65-160 7-120 (331)
317 2r00_A Aspartate-semialdehyde 96.8 0.0018 6.2E-08 61.1 6.4 92 64-163 3-98 (336)
318 1xyg_A Putative N-acetyl-gamma 96.8 0.002 6.9E-08 61.4 6.7 99 65-174 17-128 (359)
319 1c1d_A L-phenylalanine dehydro 96.8 0.0019 6.3E-08 61.5 6.4 87 64-163 175-263 (355)
320 2ep5_A 350AA long hypothetical 96.7 0.0022 7.4E-08 60.9 6.3 90 64-163 4-110 (350)
321 3e5r_O PP38, glyceraldehyde-3- 96.7 0.002 6.9E-08 60.9 6.0 90 63-161 2-126 (337)
322 3h2s_A Putative NADH-flavin re 96.6 0.0049 1.7E-07 53.4 7.7 64 65-133 1-71 (224)
323 1hdo_A Biliverdin IX beta redu 96.6 0.0061 2.1E-07 51.8 8.1 64 65-133 4-76 (206)
324 2nqt_A N-acetyl-gamma-glutamyl 96.6 0.0048 1.6E-07 58.6 7.9 150 65-230 10-177 (352)
325 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.004 1.4E-07 55.3 6.8 77 64-144 31-111 (223)
326 3e8x_A Putative NAD-dependent 96.6 0.0027 9.2E-08 55.9 5.7 67 63-133 20-93 (236)
327 1nvt_A Shikimate 5'-dehydrogen 96.5 0.00083 2.8E-08 61.8 2.3 41 64-109 128-168 (287)
328 2dvm_A Malic enzyme, 439AA lon 96.5 0.0097 3.3E-07 58.1 9.9 94 65-165 187-300 (439)
329 1lnq_A MTHK channels, potassiu 96.5 0.0039 1.3E-07 58.3 6.5 66 64-136 115-189 (336)
330 3tum_A Shikimate dehydrogenase 96.5 0.0014 4.8E-08 60.0 3.2 68 64-134 125-197 (269)
331 2a9f_A Putative malic enzyme ( 96.5 0.0023 7.7E-08 61.5 4.8 91 65-165 189-293 (398)
332 1ebf_A Homoserine dehydrogenas 96.4 0.0041 1.4E-07 59.2 6.5 70 64-136 4-96 (358)
333 3ing_A Homoserine dehydrogenas 96.3 0.0019 6.5E-08 60.7 3.2 91 65-160 5-116 (325)
334 3ngx_A Bifunctional protein fo 96.3 0.0062 2.1E-07 55.7 6.4 73 62-160 148-221 (276)
335 1zud_1 Adenylyltransferase THI 96.3 0.013 4.3E-07 52.9 8.4 35 64-101 28-62 (251)
336 4h7p_A Malate dehydrogenase; s 96.2 0.0099 3.4E-07 56.2 7.9 99 65-166 25-155 (345)
337 1t4b_A Aspartate-semialdehyde 96.2 0.015 5.2E-07 55.4 9.2 91 65-163 2-100 (367)
338 3e48_A Putative nucleoside-dip 96.2 0.023 7.9E-07 51.2 9.9 64 65-133 1-74 (289)
339 3eag_A UDP-N-acetylmuramate:L- 96.1 0.0067 2.3E-07 56.7 6.1 66 65-135 5-79 (326)
340 4a26_A Putative C-1-tetrahydro 96.1 0.0068 2.3E-07 56.1 5.6 71 64-160 165-238 (300)
341 2c2x_A Methylenetetrahydrofola 96.1 0.0068 2.3E-07 55.6 5.6 71 64-160 158-231 (281)
342 3dqp_A Oxidoreductase YLBE; al 96.1 0.0056 1.9E-07 53.1 4.8 64 65-133 1-72 (219)
343 4gx0_A TRKA domain protein; me 96.0 0.021 7E-07 57.3 9.4 98 65-169 349-451 (565)
344 3l07_A Bifunctional protein fo 96.0 0.011 3.7E-07 54.4 6.6 71 64-160 161-232 (285)
345 1y7t_A Malate dehydrogenase; N 96.0 0.0057 2E-07 57.1 4.9 70 63-132 3-88 (327)
346 1vkn_A N-acetyl-gamma-glutamyl 96.0 0.021 7.3E-07 54.0 8.8 101 63-174 12-123 (351)
347 3o38_A Short chain dehydrogena 96.0 0.035 1.2E-06 49.6 10.0 83 65-162 23-110 (266)
348 1a4i_A Methylenetetrahydrofola 95.9 0.012 4.1E-07 54.5 6.6 71 64-160 165-236 (301)
349 4dpl_A Malonyl-COA/succinyl-CO 95.9 0.0047 1.6E-07 58.8 4.0 92 63-164 6-113 (359)
350 4dpk_A Malonyl-COA/succinyl-CO 95.9 0.0047 1.6E-07 58.8 4.0 92 63-164 6-113 (359)
351 2x4g_A Nucleoside-diphosphate- 95.9 0.011 3.9E-07 54.5 6.4 66 63-133 12-86 (342)
352 5mdh_A Malate dehydrogenase; o 95.9 0.0063 2.1E-07 57.4 4.6 69 64-132 3-87 (333)
353 1b0a_A Protein (fold bifunctio 95.8 0.0099 3.4E-07 54.7 5.6 71 64-160 159-230 (288)
354 3hsk_A Aspartate-semialdehyde 95.8 0.015 5E-07 55.9 6.8 92 64-164 19-127 (381)
355 3p2o_A Bifunctional protein fo 95.8 0.014 4.8E-07 53.6 6.4 71 64-160 160-231 (285)
356 2ph5_A Homospermidine synthase 95.8 0.0068 2.3E-07 59.6 4.4 43 61-103 10-52 (480)
357 3rui_A Ubiquitin-like modifier 95.7 0.032 1.1E-06 52.6 8.7 35 64-101 34-68 (340)
358 2x5j_O E4PDH, D-erythrose-4-ph 95.7 0.01 3.5E-07 56.0 5.3 93 63-162 1-126 (339)
359 3gpi_A NAD-dependent epimerase 95.7 0.01 3.5E-07 53.6 5.1 62 65-133 4-72 (286)
360 3m2p_A UDP-N-acetylglucosamine 95.7 0.018 6.3E-07 52.5 6.9 64 63-132 1-70 (311)
361 7mdh_A Protein (malate dehydro 95.7 0.022 7.6E-07 54.4 7.6 100 64-166 32-163 (375)
362 3slg_A PBGP3 protein; structur 95.6 0.019 6.4E-07 53.9 6.9 65 64-132 24-99 (372)
363 1hye_A L-lactate/malate dehydr 95.6 0.019 6.4E-07 53.4 6.8 66 65-132 1-82 (313)
364 1xq6_A Unknown protein; struct 95.6 0.03 1E-06 49.0 7.7 66 63-132 3-77 (253)
365 2csu_A 457AA long hypothetical 95.6 0.031 1.1E-06 54.8 8.4 89 63-165 7-100 (457)
366 2r6j_A Eugenol synthase 1; phe 95.5 0.019 6.7E-07 52.6 6.4 77 63-144 10-102 (318)
367 3uw3_A Aspartate-semialdehyde 95.5 0.043 1.5E-06 52.5 8.8 92 64-163 4-103 (377)
368 4gsl_A Ubiquitin-like modifier 95.5 0.032 1.1E-06 56.4 8.2 35 64-101 326-360 (615)
369 2wm3_A NMRA-like family domain 95.5 0.018 6.2E-07 52.3 6.0 68 63-134 4-82 (299)
370 3tz6_A Aspartate-semialdehyde 95.4 0.02 6.9E-07 54.1 6.3 91 65-163 2-96 (344)
371 3b1j_A Glyceraldehyde 3-phosph 95.4 0.019 6.5E-07 54.2 6.0 24 63-86 1-24 (339)
372 3pzr_A Aspartate-semialdehyde 95.4 0.052 1.8E-06 51.8 8.9 91 65-163 1-99 (370)
373 1lu9_A Methylene tetrahydromet 95.3 0.013 4.4E-07 53.6 4.5 42 64-109 119-161 (287)
374 3cps_A Glyceraldehyde 3-phosph 95.3 0.022 7.6E-07 54.0 6.2 90 64-162 17-139 (354)
375 3i1j_A Oxidoreductase, short c 95.3 0.091 3.1E-06 46.1 10.0 85 63-162 12-103 (247)
376 1iy8_A Levodione reductase; ox 95.3 0.069 2.4E-06 47.8 9.2 84 65-162 14-101 (267)
377 4ibo_A Gluconate dehydrogenase 95.3 0.069 2.4E-06 48.2 9.3 99 44-162 9-112 (271)
378 4gx0_A TRKA domain protein; me 95.3 0.048 1.7E-06 54.6 8.9 68 63-135 126-202 (565)
379 1qyc_A Phenylcoumaran benzylic 95.3 0.032 1.1E-06 50.7 7.0 66 64-134 4-87 (308)
380 2d2i_A Glyceraldehyde 3-phosph 95.3 0.015 5.1E-07 55.7 4.7 24 63-86 1-24 (380)
381 4a5o_A Bifunctional protein fo 95.3 0.027 9.4E-07 51.7 6.3 71 64-160 161-232 (286)
382 3lf2_A Short chain oxidoreduct 95.2 0.088 3E-06 47.1 9.6 86 63-162 6-96 (265)
383 3i6i_A Putative leucoanthocyan 95.2 0.021 7.2E-07 53.1 5.5 75 65-144 11-106 (346)
384 1y1p_A ARII, aldehyde reductas 95.2 0.034 1.2E-06 51.0 6.8 67 62-132 9-91 (342)
385 3l6e_A Oxidoreductase, short-c 95.1 0.071 2.4E-06 46.9 8.6 78 66-162 5-86 (235)
386 1vl8_A Gluconate 5-dehydrogena 95.1 0.093 3.2E-06 47.1 9.5 83 65-162 22-108 (267)
387 3h8v_A Ubiquitin-like modifier 95.1 0.026 8.9E-07 52.1 5.8 35 64-101 36-70 (292)
388 3gaf_A 7-alpha-hydroxysteroid 95.1 0.13 4.5E-06 45.8 10.3 85 62-162 9-98 (256)
389 3dii_A Short-chain dehydrogena 95.1 0.055 1.9E-06 47.9 7.8 83 63-162 1-84 (247)
390 3qiv_A Short-chain dehydrogena 95.1 0.17 5.8E-06 44.6 11.0 82 65-162 10-95 (253)
391 1qyd_A Pinoresinol-lariciresin 95.1 0.034 1.2E-06 50.5 6.5 65 64-133 4-85 (313)
392 3h2z_A Mannitol-1-phosphate 5- 95.1 0.057 1.9E-06 51.7 8.2 96 65-165 1-125 (382)
393 3f1l_A Uncharacterized oxidore 95.1 0.13 4.3E-06 45.7 10.1 84 65-162 13-101 (252)
394 1xgk_A Nitrogen metabolite rep 95.1 0.033 1.1E-06 52.3 6.6 66 64-133 5-82 (352)
395 3vh1_A Ubiquitin-like modifier 95.1 0.057 1.9E-06 54.5 8.5 34 64-100 327-360 (598)
396 3c1o_A Eugenol synthase; pheny 95.1 0.024 8.1E-07 52.0 5.4 77 63-144 3-100 (321)
397 2ydy_A Methionine adenosyltran 95.0 0.037 1.3E-06 50.5 6.5 64 63-132 1-68 (315)
398 3ged_A Short-chain dehydrogena 95.0 0.12 4E-06 46.4 9.6 79 63-161 1-83 (247)
399 3ijr_A Oxidoreductase, short c 95.0 0.23 7.9E-06 45.1 11.8 82 65-162 48-134 (291)
400 3kkj_A Amine oxidase, flavin-c 94.9 0.023 7.9E-07 48.6 4.7 35 63-101 1-35 (336)
401 3lk7_A UDP-N-acetylmuramoylala 94.9 0.021 7.2E-07 55.8 4.9 67 64-135 9-85 (451)
402 4g65_A TRK system potassium up 94.9 0.052 1.8E-06 53.3 7.6 69 64-137 235-313 (461)
403 3e03_A Short chain dehydrogena 94.8 0.16 5.3E-06 45.8 10.1 89 63-162 4-99 (274)
404 4fc7_A Peroxisomal 2,4-dienoyl 94.8 0.3 1E-05 43.9 12.1 83 65-162 28-114 (277)
405 3vps_A TUNA, NAD-dependent epi 94.8 0.032 1.1E-06 50.7 5.5 36 63-102 6-42 (321)
406 3two_A Mannitol dehydrogenase; 94.8 0.03 1E-06 52.4 5.3 76 64-144 177-255 (348)
407 2ehd_A Oxidoreductase, oxidore 94.7 0.083 2.8E-06 46.0 7.8 80 63-162 4-87 (234)
408 3r1i_A Short-chain type dehydr 94.7 0.088 3E-06 47.6 8.3 84 63-162 30-118 (276)
409 2gas_A Isoflavone reductase; N 94.7 0.031 1E-06 50.7 5.2 76 64-144 2-99 (307)
410 2yv3_A Aspartate-semialdehyde 94.7 0.034 1.2E-06 52.2 5.6 89 65-163 1-94 (331)
411 3rih_A Short chain dehydrogena 94.7 0.13 4.6E-06 46.9 9.4 85 63-162 39-128 (293)
412 3pk0_A Short-chain dehydrogena 94.7 0.14 4.9E-06 45.7 9.4 85 63-162 8-97 (262)
413 3t7c_A Carveol dehydrogenase; 94.7 0.21 7.3E-06 45.5 10.7 90 65-162 29-126 (299)
414 1y8q_A Ubiquitin-like 1 activa 94.7 0.14 4.9E-06 48.2 9.7 34 64-100 36-69 (346)
415 4fs3_A Enoyl-[acyl-carrier-pro 94.6 0.15 5.2E-06 45.5 9.5 85 63-162 4-95 (256)
416 3sju_A Keto reductase; short-c 94.6 0.18 6E-06 45.6 10.0 83 64-162 24-110 (279)
417 1rm4_O Glyceraldehyde 3-phosph 94.6 0.029 9.9E-07 52.9 4.8 31 65-96 2-32 (337)
418 3lyl_A 3-oxoacyl-(acyl-carrier 94.6 0.21 7.2E-06 43.8 10.3 82 65-162 6-91 (247)
419 3tjr_A Short chain dehydrogena 94.6 0.21 7E-06 45.7 10.5 82 65-162 32-117 (301)
420 3gem_A Short chain dehydrogena 94.5 0.11 3.6E-06 46.6 8.2 77 65-162 28-108 (260)
421 4b4o_A Epimerase family protei 94.5 0.021 7.1E-07 51.9 3.5 57 65-131 1-58 (298)
422 3v2h_A D-beta-hydroxybutyrate 94.5 0.13 4.6E-06 46.4 9.0 84 64-162 25-113 (281)
423 3n74_A 3-ketoacyl-(acyl-carrie 94.5 0.14 4.7E-06 45.4 8.9 79 65-162 10-92 (261)
424 3nyw_A Putative oxidoreductase 94.5 0.1 3.5E-06 46.3 8.0 84 65-162 8-96 (250)
425 3nkl_A UDP-D-quinovosamine 4-d 94.5 0.12 4.2E-06 41.3 7.8 76 64-144 4-88 (141)
426 2o7s_A DHQ-SDH PR, bifunctiona 94.5 0.023 7.8E-07 56.7 4.0 44 64-111 364-407 (523)
427 3ai3_A NADPH-sorbose reductase 94.5 0.18 6.1E-06 44.8 9.6 83 65-162 8-94 (263)
428 2bka_A CC3, TAT-interacting pr 94.5 0.047 1.6E-06 47.7 5.6 66 65-133 19-93 (242)
429 2bll_A Protein YFBG; decarboxy 94.4 0.078 2.7E-06 48.7 7.3 64 65-132 1-75 (345)
430 3sc4_A Short chain dehydrogena 94.4 0.17 5.9E-06 45.8 9.4 91 63-162 7-102 (285)
431 2b4q_A Rhamnolipids biosynthes 94.4 0.2 6.7E-06 45.2 9.7 81 65-162 30-114 (276)
432 3zv4_A CIS-2,3-dihydrobiphenyl 94.3 0.14 4.8E-06 46.3 8.6 78 66-162 7-88 (281)
433 3rkr_A Short chain oxidoreduct 94.3 0.15 5E-06 45.5 8.6 82 65-162 30-115 (262)
434 4dqx_A Probable oxidoreductase 94.3 0.16 5.6E-06 45.8 9.0 81 63-162 25-110 (277)
435 4egf_A L-xylulose reductase; s 94.3 0.2 6.8E-06 44.8 9.5 85 63-162 18-107 (266)
436 3tfo_A Putative 3-oxoacyl-(acy 94.3 0.18 6.1E-06 45.3 9.2 84 63-162 3-90 (264)
437 4e3z_A Putative oxidoreductase 94.3 0.25 8.5E-06 44.2 10.1 81 66-162 28-113 (272)
438 2gdz_A NAD+-dependent 15-hydro 94.3 0.12 4E-06 46.2 7.9 85 65-163 8-96 (267)
439 4fn4_A Short chain dehydrogena 94.3 0.19 6.6E-06 45.2 9.3 84 63-162 5-93 (254)
440 3l77_A Short-chain alcohol deh 94.3 0.12 4E-06 45.1 7.7 83 65-162 3-89 (235)
441 1geg_A Acetoin reductase; SDR 94.2 0.18 6.3E-06 44.6 9.1 84 63-162 1-88 (256)
442 3sc6_A DTDP-4-dehydrorhamnose 94.2 0.036 1.2E-06 49.8 4.3 58 63-132 4-64 (287)
443 3h5n_A MCCB protein; ubiquitin 94.2 0.11 3.7E-06 49.2 7.8 35 64-101 118-152 (353)
444 1pqw_A Polyketide synthase; ro 94.2 0.11 3.7E-06 44.2 7.2 45 64-113 39-84 (198)
445 2pnf_A 3-oxoacyl-[acyl-carrier 94.2 0.25 8.6E-06 43.1 9.8 83 65-162 8-94 (248)
446 1uls_A Putative 3-oxoacyl-acyl 94.2 0.13 4.4E-06 45.5 7.8 77 65-162 6-86 (245)
447 3ucx_A Short chain dehydrogena 94.2 0.29 9.8E-06 43.6 10.2 83 65-163 12-98 (264)
448 3k31_A Enoyl-(acyl-carrier-pro 94.2 0.22 7.4E-06 45.4 9.6 81 65-162 31-117 (296)
449 3imf_A Short chain dehydrogena 94.1 0.22 7.7E-06 44.2 9.5 84 63-162 4-92 (257)
450 4fgs_A Probable dehydrogenase 94.1 0.11 3.9E-06 47.3 7.5 78 66-162 30-112 (273)
451 3o26_A Salutaridine reductase; 94.1 0.13 4.5E-06 46.5 8.0 84 65-163 13-101 (311)
452 1tt5_B Ubiquitin-activating en 94.1 0.17 6E-06 49.1 9.2 34 64-100 40-73 (434)
453 3ioy_A Short-chain dehydrogena 94.1 0.16 5.6E-06 46.9 8.7 84 65-162 9-96 (319)
454 4g81_D Putative hexonate dehyd 94.1 0.21 7.3E-06 44.9 9.2 84 63-162 7-95 (255)
455 4hb9_A Similarities with proba 94.1 0.046 1.6E-06 51.3 5.0 35 64-102 1-35 (412)
456 2rh8_A Anthocyanidin reductase 94.1 0.11 3.6E-06 47.9 7.3 66 62-131 7-87 (338)
457 2a4k_A 3-oxoacyl-[acyl carrier 94.1 0.22 7.4E-06 44.6 9.2 79 65-162 7-89 (263)
458 1xu9_A Corticosteroid 11-beta- 94.1 0.2 6.9E-06 45.1 9.1 85 65-164 29-117 (286)
459 3kvo_A Hydroxysteroid dehydrog 94.0 0.32 1.1E-05 45.6 10.6 87 65-162 46-138 (346)
460 3tpc_A Short chain alcohol deh 94.0 0.19 6.4E-06 44.6 8.6 78 66-162 9-90 (257)
461 4hv4_A UDP-N-acetylmuramate--L 94.0 0.041 1.4E-06 54.4 4.5 66 64-134 22-93 (494)
462 4dmm_A 3-oxoacyl-[acyl-carrier 94.0 0.35 1.2E-05 43.4 10.4 84 63-162 26-115 (269)
463 2cfc_A 2-(R)-hydroxypropyl-COM 94.0 0.16 5.6E-06 44.4 8.1 85 63-162 1-89 (250)
464 2zat_A Dehydrogenase/reductase 94.0 0.32 1.1E-05 43.1 10.0 84 63-162 12-100 (260)
465 3uko_A Alcohol dehydrogenase c 93.9 0.23 8E-06 46.8 9.6 77 64-144 194-284 (378)
466 1pl8_A Human sorbitol dehydrog 93.9 0.21 7.2E-06 46.8 9.2 77 64-144 172-263 (356)
467 3oh8_A Nucleoside-diphosphate 93.9 0.057 1.9E-06 53.5 5.5 62 64-132 147-209 (516)
468 2pzm_A Putative nucleotide sug 93.9 0.11 3.6E-06 47.9 6.9 65 64-132 20-96 (330)
469 1w6u_A 2,4-dienoyl-COA reducta 93.9 0.43 1.5E-05 43.1 11.0 83 65-162 27-113 (302)
470 3m1a_A Putative dehydrogenase; 93.9 0.21 7.3E-06 44.7 8.8 79 65-162 6-88 (281)
471 4eso_A Putative oxidoreductase 93.9 0.23 7.7E-06 44.2 8.9 79 65-162 9-91 (255)
472 2c5a_A GDP-mannose-3', 5'-epim 93.8 0.1 3.5E-06 49.1 6.9 64 64-132 29-101 (379)
473 2gn4_A FLAA1 protein, UDP-GLCN 93.8 0.076 2.6E-06 49.6 5.9 66 64-132 21-99 (344)
474 2yy7_A L-threonine dehydrogena 93.8 0.044 1.5E-06 49.7 4.2 65 63-132 1-76 (312)
475 2jl1_A Triphenylmethane reduct 93.8 0.042 1.4E-06 49.3 3.9 64 65-133 1-75 (287)
476 3ay3_A NAD-dependent epimerase 93.8 0.02 6.9E-07 51.1 1.8 62 63-132 1-71 (267)
477 1fmc_A 7 alpha-hydroxysteroid 93.8 0.4 1.4E-05 41.9 10.4 82 65-162 12-97 (255)
478 3cmc_O GAPDH, glyceraldehyde-3 93.8 0.037 1.3E-06 52.1 3.6 89 65-162 2-122 (334)
479 2wsb_A Galactitol dehydrogenas 93.7 0.23 7.8E-06 43.6 8.6 78 65-162 12-94 (254)
480 1yo6_A Putative carbonyl reduc 93.7 0.31 1.1E-05 42.3 9.4 81 65-162 4-90 (250)
481 2jhf_A Alcohol dehydrogenase E 93.7 0.28 9.5E-06 46.2 9.6 77 64-144 192-282 (374)
482 3uog_A Alcohol dehydrogenase; 93.7 0.11 3.9E-06 48.8 6.8 45 64-113 190-234 (363)
483 1ja9_A 4HNR, 1,3,6,8-tetrahydr 93.7 0.23 8E-06 44.0 8.6 82 65-162 22-108 (274)
484 4id9_A Short-chain dehydrogena 93.6 0.059 2E-06 49.8 4.7 65 63-132 18-85 (347)
485 1gad_O D-glyceraldehyde-3-phos 93.6 0.11 3.8E-06 48.7 6.6 76 65-143 2-107 (330)
486 2z1n_A Dehydrogenase; reductas 93.6 0.34 1.1E-05 43.0 9.6 83 65-162 8-94 (260)
487 1hdg_O Holo-D-glyceraldehyde-3 93.6 0.06 2.1E-06 50.6 4.7 91 65-162 1-123 (332)
488 3p19_A BFPVVD8, putative blue 93.6 0.36 1.2E-05 43.2 9.8 78 63-162 15-96 (266)
489 1e3i_A Alcohol dehydrogenase, 93.6 0.27 9.1E-06 46.3 9.3 76 65-144 197-286 (376)
490 4dyv_A Short-chain dehydrogena 93.6 0.16 5.5E-06 45.8 7.5 80 64-162 27-111 (272)
491 3grp_A 3-oxoacyl-(acyl carrier 93.6 0.29 9.9E-06 43.9 9.1 81 63-162 25-110 (266)
492 3v8b_A Putative dehydrogenase, 93.6 0.29 1E-05 44.3 9.2 81 66-162 30-114 (283)
493 4b7c_A Probable oxidoreductase 93.6 0.14 4.7E-06 47.5 7.1 75 64-142 150-236 (336)
494 3ctm_A Carbonyl reductase; alc 93.5 0.35 1.2E-05 43.2 9.6 85 62-162 31-120 (279)
495 2jah_A Clavulanic acid dehydro 93.5 0.29 9.8E-06 43.2 8.9 82 65-162 8-93 (247)
496 3sx2_A Putative 3-ketoacyl-(ac 93.5 0.41 1.4E-05 42.8 10.1 84 63-162 11-111 (278)
497 3ip1_A Alcohol dehydrogenase, 93.5 0.19 6.7E-06 47.9 8.3 68 64-135 214-293 (404)
498 2zcu_A Uncharacterized oxidore 93.5 0.14 4.6E-06 45.8 6.8 63 66-133 1-74 (286)
499 1p0f_A NADP-dependent alcohol 93.5 0.27 9.1E-06 46.3 9.2 76 65-144 193-282 (373)
500 3ak4_A NADH-dependent quinucli 93.5 0.32 1.1E-05 43.1 9.3 79 65-162 13-95 (263)
No 1
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=100.00 E-value=1.5e-49 Score=371.40 Aligned_cols=257 Identities=29% Similarity=0.455 Sum_probs=241.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
+|||+|||+|+||++|+++|.++|+ ++.+|++|+|++++++.+.+++|+ .+.++.++++++|+||+||||+.+.++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~-~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p~~~~~vl~ 81 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGY-DPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPHQIKMVCE 81 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTC-CGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCGGGHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCC-CCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCHHHHHHHHH
Confidence 4789999999999999999999993 556899999999999999887788 77788999999999999999999999999
Q ss_pred Hhhhcc-cccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCceEEEEeCCCCCccHHHHHHHH
Q psy316 143 GLVNDK-VTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGITGMCHDVHLDKESEHLNMAI 221 (341)
Q Consensus 143 ~i~~~~-l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l~~~~~~~~~~~~~~~v~ 221 (341)
++ .++ + +++++|||+++|++++.++++++ .+.+ ++|+|||+|..+++|++.+++++..++ ++.+.++
T Consensus 82 ~l-~~~~l--~~~~iiiS~~agi~~~~l~~~l~------~~~~-vvr~mPn~p~~v~~g~~~l~~~~~~~~--~~~~~v~ 149 (280)
T 3tri_A 82 EL-KDILS--ETKILVISLAVGVTTPLIEKWLG------KASR-IVRAMPNTPSSVRAGATGLFANETVDK--DQKNLAE 149 (280)
T ss_dssp HH-HHHHH--TTTCEEEECCTTCCHHHHHHHHT------CCSS-EEEEECCGGGGGTCEEEEEECCTTSCH--HHHHHHH
T ss_pred HH-Hhhcc--CCCeEEEEecCCCCHHHHHHHcC------CCCe-EEEEecCChHHhcCccEEEEeCCCCCH--HHHHHHH
Confidence 99 988 8 77889999999999999999998 4678 999999999999999999998887777 9999999
Q ss_pred HHHHhcCCeEEc-CCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q psy316 222 KIMEQGGIVEII-PESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQLLKGSGQLVHKDLLRMDHAAQ 300 (341)
Q Consensus 222 ~ll~~lG~~~~v-~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~~~gs~~l~~~~~~~~~~~~~ 300 (341)
++|+.+|.++++ +|+.+|.+++++||+|+|++.++++|.+++++.|++++++++++.+++.|+++++.+ ++
T Consensus 150 ~l~~~iG~~~~v~~E~~~d~~talsgsgpa~~~~~~eal~~a~v~~Gl~~~~a~~l~~~t~~G~a~~~~~--------~~ 221 (280)
T 3tri_A 150 SIMRAVGLVIWVSSEDQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTVLGAARMALE--------TE 221 (280)
T ss_dssp HHHGGGEEEEECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHT--------CS
T ss_pred HHHHHCCCeEEECCHHHhhHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh--------cC
Confidence 999999998888 788999999999999999999999999999999999999999999999999999988 89
Q ss_pred CChHHHHHhcCCCchHHHHHHHHHHhCCchHHHHHHHHhhC
Q psy316 301 AHPAVIKDQICSPGGSTIAGIHALEKAGVRTPFSSAARRTK 341 (341)
Q Consensus 301 ~~p~~l~~~v~tpgG~t~~~l~~l~~~~~~~~~~~a~~~a~ 341 (341)
.+|.+|+++|+||||+|++||+.||++||+..+.+|+++|+
T Consensus 222 ~~p~~l~~~v~spgGtT~~~l~~le~~g~~~~~~~av~aa~ 262 (280)
T 3tri_A 222 QSVVQLRQFVTSPGGTTEQAIKVLESGNLRELFIKALTAAV 262 (280)
T ss_dssp SCHHHHHHHHCCTTSHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHhccCCChHHHHHHHHHHHCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999873
No 2
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=100.00 E-value=6.3e-46 Score=340.28 Aligned_cols=246 Identities=31% Similarity=0.589 Sum_probs=200.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
|+|||+|||+|+||.+|+++|.++|++++.+|++|+|++++++.+.+++|+ ...++.++++++|+||+||||+++.+++
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~~~~~v~ 80 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPDLYASII 80 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTTTHHHHC
T ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHHHHHHHH
Confidence 568999999999999999999999965666999999999999988765688 7788899999999999999999999999
Q ss_pred HHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCceEEEEeCCCCCccHHHHHHHH
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGITGMCHDVHLDKESEHLNMAI 221 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l~~~~~~~~~~~~~~~v~ 221 (341)
+++ .+++ +++++|||+++|++.+.+++.++ .+.+ ++|+|||+|...+.|.+.+++++..++ ++++.++
T Consensus 81 ~~l-~~~l--~~~~~vvs~~~gi~~~~l~~~~~------~~~~-~v~~~p~~p~~~~~g~~~~~~~~~~~~--~~~~~~~ 148 (247)
T 3gt0_A 81 NEI-KEII--KNDAIIVTIAAGKSIESTENAFN------KKVK-VVRVMPNTPALVGEGMSALCPNEMVTE--KDLEDVL 148 (247)
T ss_dssp ----CCSS--CTTCEEEECSCCSCHHHHHHHHC------SCCE-EEEEECCGGGGGTCEEEEEEECTTCCH--HHHHHHH
T ss_pred HHH-Hhhc--CCCCEEEEecCCCCHHHHHHHhC------CCCc-EEEEeCChHHHHcCceEEEEeCCCCCH--HHHHHHH
Confidence 999 8888 88999999999999999999887 4567 999999999999999999988776777 8999999
Q ss_pred HHHHhcCCeEEcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccCCC
Q psy316 222 KIMEQGGIVEIIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQLLKGSGQLVHKDLLRMDHAAQA 301 (341)
Q Consensus 222 ~ll~~lG~~~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~~~gs~~l~~~~~~~~~~~~~~ 301 (341)
++|+.+|.+++++|+.+|.+++++||+|+|++.++++|.+++++.|++++++++++.+++.|+..++.+ ++.
T Consensus 149 ~l~~~~G~~~~~~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~~gs~~~~~~--------~~~ 220 (247)
T 3gt0_A 149 NIFNSFGQTEIVSEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAVLGSAKMVLE--------TGI 220 (247)
T ss_dssp HHHGGGEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH--------SCC
T ss_pred HHHHhCCCEEEeCHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH--------cCC
Confidence 999999998888999999999999999999999999999999999999999999999999999999988 899
Q ss_pred ChHHHHHhcCCCchHHHHHHHHHHhCC
Q psy316 302 HPAVIKDQICSPGGSTIAGIHALEKAG 328 (341)
Q Consensus 302 ~p~~l~~~v~tpgG~t~~~l~~l~~~~ 328 (341)
+|.+|+++|+||||+|++||+.||++|
T Consensus 221 ~p~~l~~~v~spgG~t~~gl~~le~~~ 247 (247)
T 3gt0_A 221 HPGELKDMVCSPGGTTIEAVATLEEKG 247 (247)
T ss_dssp ---------------------------
T ss_pred CHHHHHHhcCCCCchHHHHHHHHHhCc
Confidence 999999999999999999999999865
No 3
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=100.00 E-value=2.7e-39 Score=307.60 Aligned_cols=259 Identities=31% Similarity=0.541 Sum_probs=232.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChh--hhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSER--FKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e--~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~v 140 (341)
+|||+|||+|+||++|+.+|.++|..++++|++|+|+++ +++.+.+ +|+ ...++.+++.++|+||+||||+++.++
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~-~G~~~~~~~~e~~~~aDvVilav~~~~~~~v 100 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRK-MGVKLTPHNKETVQHSDVLFLAVKPHIIPFI 100 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHH-HTCEEESCHHHHHHHCSEEEECSCGGGHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHH-cCCEEeCChHHHhccCCEEEEEeCHHHHHHH
Confidence 468999999999999999999998444469999999986 7777765 588 667888899999999999999999999
Q ss_pred HHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCceEEEEeCCCCCccHHHHHHH
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGITGMCHDVHLDKESEHLNMA 220 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l~~~~~~~~~~~~~~~v 220 (341)
+.++ .+.+ +++++||++++|++.+.++++++... ...+ +++.||+.|..+++|.+++++++..++ +..+.+
T Consensus 101 l~~l-~~~l--~~~~ivvs~s~gi~~~~l~~~l~~~~---~~~~-vv~~~p~~p~~~~~g~~v~~~g~~~~~--~~~~~v 171 (322)
T 2izz_A 101 LDEI-GADI--EDRHIVVSCAAGVTISSIEKKLSAFR---PAPR-VIRCMTNTPVVVREGATVYATGTHAQV--EDGRLM 171 (322)
T ss_dssp HHHH-GGGC--CTTCEEEECCTTCCHHHHHHHHHTTS---SCCE-EEEEECCGGGGGTCEEEEEEECTTCCH--HHHHHH
T ss_pred HHHH-Hhhc--CCCCEEEEeCCCCCHHHHHHHHhhcC---CCCe-EEEEeCCcHHHHcCCeEEEEeCCCCCH--HHHHHH
Confidence 9999 8888 78999999999999988887775211 1357 899999999999999888888776666 889999
Q ss_pred HHHHHhcCCeEEcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q psy316 221 IKIMEQGGIVEIIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQLLKGSGQLVHKDLLRMDHAAQ 300 (341)
Q Consensus 221 ~~ll~~lG~~~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~~~gs~~l~~~~~~~~~~~~~ 300 (341)
+++|+.+|..++++++.++.+++++|++|+|++.+++++.+++++.|++++++++++.+++.|+.+++.+ .+
T Consensus 172 ~~ll~~~G~~~~~~e~~~~~~~a~~g~gpa~~~~~~eala~a~~~~Gl~~~~a~~l~~~~~~g~~~~~~~--------~~ 243 (322)
T 2izz_A 172 EQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLH--------SE 243 (322)
T ss_dssp HHHHHTTEEEEECCGGGHHHHHHHTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH--------CS
T ss_pred HHHHHhCCCEEEeCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh--------cC
Confidence 9999999998888999999999999999999999999999999999999999999999999999998876 67
Q ss_pred CChHHHHHhcCCCchHHHHHHHHHHhCCchHHHHHHHHhh
Q psy316 301 AHPAVIKDQICSPGGSTIAGIHALEKAGVRTPFSSAARRT 340 (341)
Q Consensus 301 ~~p~~l~~~v~tpgG~t~~~l~~l~~~~~~~~~~~a~~~a 340 (341)
.+|..|++.+++|||+|+++++.|++.+|+..+.+|+.++
T Consensus 244 ~~p~~l~~~v~sp~g~t~~~l~~l~~~g~~~~~~~av~~~ 283 (322)
T 2izz_A 244 QHPGQLKDNVSSPGGATIHALHVLESGGFRSLLINAVEAS 283 (322)
T ss_dssp SCHHHHHHHHCCTTSHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCHHHHHHhCCCCCcHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999875
No 4
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=100.00 E-value=3.7e-37 Score=283.30 Aligned_cols=250 Identities=31% Similarity=0.488 Sum_probs=225.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
+|||+|||+|+||.++++.|.+.| ++|.+|+|++++++.+.+++|+ ...++.++++++|+||+|+|++.+.+++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g----~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~~~~~~~v~~ 78 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTP----HELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLK 78 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSS----CEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCGGGHHHHHT
T ss_pred ccEEEEECCCHHHHHHHHHHHhCC----CeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeCcHhHHHHHH
Confidence 369999999999999999999888 4899999999999888765677 67788888999999999999999888887
Q ss_pred HhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCceEEEEeCCCCCccHHHHHHHHH
Q psy316 143 GLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGITGMCHDVHLDKESEHLNMAIK 222 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l~~~~~~~~~~~~~~~v~~ 222 (341)
++ .++++||++.+|++.+.+++.++ .+.+ +++.+|++|...++|.+.++++...++ +..+.+++
T Consensus 79 ~l-------~~~~~vv~~~~~~~~~~l~~~~~------~~~~-~v~~~p~~~~~~~~g~~~i~~~~~~~~--~~~~~~~~ 142 (259)
T 2ahr_A 79 PL-------HFKQPIISMAAGISLQRLATFVG------QDLP-LLRIMPNMNAQILQSSTALTGNALVSQ--ELQARVRD 142 (259)
T ss_dssp TS-------CCCSCEEECCTTCCHHHHHHHHC------TTSC-EEEEECCGGGGGTCEEEEEEECTTCCH--HHHHHHHH
T ss_pred Hh-------ccCCEEEEeCCCCCHHHHHHhcC------CCCC-EEEEcCCchHHHcCceEEEEcCCCCCH--HHHHHHHH
Confidence 66 46779999999999999988887 4457 899999999999999887877765566 88999999
Q ss_pred HHHhcCCeEEcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCC
Q psy316 223 IMEQGGIVEIIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQLLKGSGQLVHKDLLRMDHAAQAH 302 (341)
Q Consensus 223 ll~~lG~~~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~~~gs~~l~~~~~~~~~~~~~~~ 302 (341)
+|+.+|..++++++.+|.+++++|++|+|++.+++++.+++++.|++++++++++.+++.|+.+++.+ .+.+
T Consensus 143 ll~~~G~~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 214 (259)
T 2ahr_A 143 LTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKT--------SSQS 214 (259)
T ss_dssp HHHTTEEEEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH--------SSSC
T ss_pred HHHhCCCEEEecHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh--------cCCC
Confidence 99999976778988999999999999999999999999999999999999999999999999998877 6778
Q ss_pred hHHHHHhcCCCchHHHHHHHHHHhCCchHHHHHHHHhhC
Q psy316 303 PAVIKDQICSPGGSTIAGIHALEKAGVRTPFSSAARRTK 341 (341)
Q Consensus 303 p~~l~~~v~tpgG~t~~~l~~l~~~~~~~~~~~a~~~a~ 341 (341)
|..|++.+++|||+|+.+++.|++.||+..+.+|+++++
T Consensus 215 p~~l~~~~~~p~~~~~~~~~~l~~~g~~~~~~~a~~~~~ 253 (259)
T 2ahr_A 215 PHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTI 253 (259)
T ss_dssp HHHHHHHHCCTTSHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCChhHHHHHHHHHHCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998863
No 5
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=100.00 E-value=2.6e-36 Score=277.67 Aligned_cols=248 Identities=27% Similarity=0.483 Sum_probs=222.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAIQG 143 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl~~ 143 (341)
|||+|||+|+||++|+++|.++|+.++++|++|+|++++ +|+ ...++.++++++|+||+|||++++.+++.+
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-------~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~ 77 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-------TTLNYMSSNEELARHCDIIVCAVKPDIAGSVLNN 77 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-------SSSEECSCHHHHHHHCSEEEECSCTTTHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-------CceEEeCCHHHHHhcCCEEEEEeCHHHHHHHHHH
Confidence 689999999999999999999984333589999998765 367 666788889999999999999999999999
Q ss_pred hhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCceEEEEeCCCCCccHHHHHHHHHH
Q psy316 144 LVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGITGMCHDVHLDKESEHLNMAIKI 223 (341)
Q Consensus 144 i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l~~~~~~~~~~~~~~~v~~l 223 (341)
+ .+.+ ++++||++++|++.+.++++++ .+.+ +++++|++|...+.|.+++++++..++ +..+.++++
T Consensus 78 l-~~~l---~~~~vv~~~~gi~~~~l~~~~~------~~~~-~v~~~p~~p~~~~~g~~~~~~~~~~~~--~~~~~~~~l 144 (262)
T 2rcy_A 78 I-KPYL---SSKLLISICGGLNIGKLEEMVG------SENK-IVWVMPNTPCLVGEGSFIYCSNKNVNS--TDKKYVNDI 144 (262)
T ss_dssp S-GGGC---TTCEEEECCSSCCHHHHHHHHC------TTSE-EEEEECCGGGGGTCEEEEEEECTTCCH--HHHHHHHHH
T ss_pred H-HHhc---CCCEEEEECCCCCHHHHHHHhC------CCCc-EEEECCChHHHHcCCeEEEEeCCCCCH--HHHHHHHHH
Confidence 9 8877 4678999999999999998887 3447 889999999999999777887765566 889999999
Q ss_pred HHhcCCeEEcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCh
Q psy316 224 MEQGGIVEIIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQLLKGSGQLVHKDLLRMDHAAQAHP 303 (341)
Q Consensus 224 l~~lG~~~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~~~gs~~l~~~~~~~~~~~~~~~p 303 (341)
|+.+|..++++++.+|.++++++++|+|++.+++++.+++++.|++++.+++++.+++.++.++..+ ++.+|
T Consensus 145 l~~~G~~~~~~~~~~~~~~a~~~~~~~~~~~~~~al~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 216 (262)
T 2rcy_A 145 FNSCGIIHEIKEKDMDIATAISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIKGSVEMVKK--------SDQPV 216 (262)
T ss_dssp HHTSEEEEECCGGGHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH--------CSSCH
T ss_pred HHhCCCEEEeCHHHccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh--------cCCCH
Confidence 9999987778988999999999999999999999999999999999999999999999999988865 56789
Q ss_pred HHHHHhcCCCchHHHHHHHHHHhCCchHHHHHHHHhh
Q psy316 304 AVIKDQICSPGGSTIAGIHALEKAGVRTPFSSAARRT 340 (341)
Q Consensus 304 ~~l~~~v~tpgG~t~~~l~~l~~~~~~~~~~~a~~~a 340 (341)
..|.+.+++|+|+++.+|+.|++.+|+..+.+|++++
T Consensus 217 ~~l~d~~~~~~~t~~~~l~~l~~~~~~~~~~~a~~~~ 253 (262)
T 2rcy_A 217 QQLKDNIVSPGGITAVGLYSLEKNSFKYTVMNAVEAA 253 (262)
T ss_dssp HHHHHHHCCTTSHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHHHHHCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999876
No 6
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=100.00 E-value=1.9e-35 Score=272.14 Aligned_cols=249 Identities=27% Similarity=0.433 Sum_probs=222.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAIQG 143 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl~~ 143 (341)
|||+|||+|+||++++.+|.++|. ++|++|+|++++++.+.+++|+ ...++.+++ ++|+||+|||++++.+++.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~---~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~~~~~~~v~~~ 76 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGG---YRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVKPQDMEAACKN 76 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS---CEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSCHHHHHHHHTT
T ss_pred CEEEEECchHHHHHHHHHHHHCCC---CeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeCchhHHHHHHH
Confidence 589999999999999999999882 3999999999999988775687 666777778 99999999999999999887
Q ss_pred hhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCceEEEEeCCCCCccHHHHHHHHHH
Q psy316 144 LVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGITGMCHDVHLDKESEHLNMAIKI 223 (341)
Q Consensus 144 i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l~~~~~~~~~~~~~~~v~~l 223 (341)
+ .+ + +++||++++|++.+.+++.++ .+.+ +++++||+|...+.|.+.++.+...++ +..+.++++
T Consensus 77 l-~~----~-~~ivv~~~~g~~~~~l~~~~~------~~~~-~v~~~~~~~~~~~~g~~~i~~~~~~~~--~~~~~~~~l 141 (263)
T 1yqg_A 77 I-RT----N-GALVLSVAAGLSVGTLSRYLG------GTRR-IVRVMPNTPGKIGLGVSGMYAEAEVSE--TDRRIADRI 141 (263)
T ss_dssp C-CC----T-TCEEEECCTTCCHHHHHHHTT------SCCC-EEEEECCGGGGGTCEEEEEECCTTSCH--HHHHHHHHH
T ss_pred h-cc----C-CCEEEEecCCCCHHHHHHHcC------CCCc-EEEEcCCHHHHHcCceEEEEcCCCCCH--HHHHHHHHH
Confidence 7 43 2 789999999999999988887 4457 889999999999888887777655556 888999999
Q ss_pred HHhcCCeEEcC-CCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCC
Q psy316 224 MEQGGIVEIIP-ESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQLLKGSGQLVHKDLLRMDHAAQAH 302 (341)
Q Consensus 224 l~~lG~~~~v~-e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~~~gs~~l~~~~~~~~~~~~~~~ 302 (341)
|+.+|..++++ ++.+|.+++++|++|+|++.+++++.+++.+.|++++++.+++.+++.|+.+++.. .+.+
T Consensus 142 ~~~~g~~~~~~~~~~~~~~~al~g~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 213 (263)
T 1yqg_A 142 MKSVGLTVWLDDEEKMHGITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQ--------TGED 213 (263)
T ss_dssp HHTTEEEEECSSTTHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH--------HCCC
T ss_pred HHhCCCEEEeCChhhccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh--------cCCC
Confidence 99999888887 89999999999999999999999999999999999999999999999999988876 6778
Q ss_pred hHHHHHhcCCCchHHHHHHHHHHhCCchHHHHHHHHhh
Q psy316 303 PAVIKDQICSPGGSTIAGIHALEKAGVRTPFSSAARRT 340 (341)
Q Consensus 303 p~~l~~~v~tpgG~t~~~l~~l~~~~~~~~~~~a~~~a 340 (341)
|..|.+.+++|||+|..+++.|++.+++..+.+++.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~a~~~~ 251 (263)
T 1yqg_A 214 FEKLQKNVTSKGGTTHEAVEAFRRHRVAEAISEGVCAC 251 (263)
T ss_dssp HHHHHHHTCCTTSHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCChhHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998875
No 7
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.97 E-value=1.4e-29 Score=235.03 Aligned_cols=243 Identities=13% Similarity=0.099 Sum_probs=195.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc---cccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF---ALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~---~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
|||+|||+|+||+++++.|.++|+ +|++|+|++++++.+.+ .|+ ...++.++ .++|+||+|||++.+.+++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~ 74 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGH----YLIGVSRQQSTCEKAVE-RQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTL 74 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHH-TTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHh-CCCCccccCCHHHh-CCCCEEEEECCHHHHHHHH
Confidence 589999999999999999999984 89999999999888765 565 34567777 8999999999999999999
Q ss_pred HHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCc------hhh----hcCc-eEEEEeCCCC
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNT------AMK----YGKG-ITGMCHDVHL 210 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~------p~~----v~~g-~~~l~~~~~~ 210 (341)
.++ .+.+ +++++|+++ ++++...++..... ..+ ++..+|.. |.. ...| .+.+++.+..
T Consensus 75 ~~l-~~~~--~~~~~vv~~-~~~~~~~~~~~~~~------~~~-~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~ 143 (279)
T 2f1k_A 75 EKL-IPHL--SPTAIVTDV-ASVKTAIAEPASQL------WSG-FIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYT 143 (279)
T ss_dssp HHH-GGGS--CTTCEEEEC-CSCCHHHHHHHHHH------STT-CEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTC
T ss_pred HHH-HhhC--CCCCEEEEC-CCCcHHHHHHHHHH------hCC-EeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCC
Confidence 999 8888 788999987 66776555544331 113 33333321 111 1133 5667765545
Q ss_pred CccHHHHHHHHHHHHhcCCe-EEcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCC--HHHHHHHHHHHHHHHHHH
Q psy316 211 DKESEHLNMAIKIMEQGGIV-EIIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIP--RDMALRIGAQLLKGSGQL 287 (341)
Q Consensus 211 ~~~~~~~~~v~~ll~~lG~~-~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~--~~~a~~lv~~~~~gs~~l 287 (341)
++ +..+.++++|+.+|.. +++++..++.++++++++|+|++. ++.+++...|++ ++.+..++.+++.++.++
T Consensus 144 ~~--~~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~---al~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~ 218 (279)
T 2f1k_A 144 DP--EQLACLRSVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSA---ALIQACAGEKDGDILKLAQNLASSGFRDTSRV 218 (279)
T ss_dssp CH--HHHHHHHHHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHH---HHHHHHHTCSCHHHHHHHHHHCCHHHHHHHTG
T ss_pred CH--HHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHH---HHHHHHHhcccccchhHHHhhcCCcccchhcc
Confidence 56 8889999999999975 556888899999999999998776 788888888887 789999999999998877
Q ss_pred HHhhhhhccccCCCChHHHHHhcCCCchHHHHHHHHHHh--CCchHHHH----HHHHhh
Q psy316 288 VHKDLLRMDHAAQAHPAVIKDQICSPGGSTIAGIHALEK--AGVRTPFS----SAARRT 340 (341)
Q Consensus 288 ~~~~~~~~~~~~~~~p~~l~~~v~tpgG~t~~~l~~l~~--~~~~~~~~----~a~~~a 340 (341)
.. .+|..|++.+++|+|+|+++|+.|++ ++|+..+. +++.++
T Consensus 219 ~~-----------~~p~~~~~~~~s~~~~~~~~l~~~~~~l~~~~~~i~~~d~~a~~~~ 266 (279)
T 2f1k_A 219 GG-----------GNPELGTMMATYNQRALLKSLQDYRQHLDQLITLISNQQWPELHRL 266 (279)
T ss_dssp GG-----------SCHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cC-----------CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 63 48999999999999999999999999 89999999 888764
No 8
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.96 E-value=2.4e-28 Score=228.02 Aligned_cols=241 Identities=15% Similarity=0.146 Sum_probs=189.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
|+|||+|||+ |+||++++++|.++|+ +|++|+|++++++.+.+ +|+...++.++++++|+||+|||++.+.+++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~----~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~aDvVi~av~~~~~~~v~ 84 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAH----HLAAIEIAPEGRDRLQG-MGIPLTDGDGWIDEADVVVLALPDNIIEKVA 84 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSS----EEEEECCSHHHHHHHHH-TTCCCCCSSGGGGTCSEEEECSCHHHHHHHH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCC----EEEEEECCHHHHHHHHh-cCCCcCCHHHHhcCCCEEEEcCCchHHHHHH
Confidence 5689999999 9999999999999984 99999999999888776 5772236677889999999999999999999
Q ss_pred HHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhh--------hcCc-------eEEEEe
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMK--------YGKG-------ITGMCH 206 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~--------v~~g-------~~~l~~ 206 (341)
+++ .+.+ +++++||+++++.+.+.+++. . .+.+ +++.+|+.|.. ...| .+.++.
T Consensus 85 ~~l-~~~l--~~~~ivv~~s~~~~~~~l~~~-~------~~~~-~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~ 153 (286)
T 3c24_A 85 EDI-VPRV--RPGTIVLILDAAAPYAGVMPE-R------ADIT-YFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCA 153 (286)
T ss_dssp HHH-GGGS--CTTCEEEESCSHHHHHTCSCC-C------TTSE-EEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEE
T ss_pred HHH-HHhC--CCCCEEEECCCCchhHHHHhh-h------CCCe-EEecCCCCccccccccchhhccCcccccccceeeee
Confidence 999 8888 789999998887765555432 2 3457 88999998765 5666 344433
Q ss_pred CCCCCccHHHHHHHHHHHHhcCC----eEEcCCCchhHH-HHHh-cchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q psy316 207 DVHLDKESEHLNMAIKIMEQGGI----VEIIPESMMNSF-GAIA-GSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQL 280 (341)
Q Consensus 207 ~~~~~~~~~~~~~v~~ll~~lG~----~~~v~e~~~d~~-~al~-g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~ 280 (341)
....++ +..+.++++|+.+|. +++++++.++.+ .+++ +++++|++.++|++.+++.+.|++++++++++.++
T Consensus 154 ~~~~~~--~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~~~~~~~~~ 231 (286)
T 3c24_A 154 LMQGPE--EHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDFMIGH 231 (286)
T ss_dssp EEESCT--HHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred ccCCCH--HHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 222345 889999999999998 566788888888 7766 68899999999999999988999999999999999
Q ss_pred HHHHHHHHHhhhhhccccCCCChHHHHHhcCCCchHHHHHHHHHHhCCchHHHH
Q psy316 281 LKGSGQLVHKDLLRMDHAAQAHPAVIKDQICSPGGSTIAGIHALEKAGVRTPFS 334 (341)
Q Consensus 281 ~~gs~~l~~~~~~~~~~~~~~~p~~l~~~v~tpgG~t~~~l~~l~~~~~~~~~~ 334 (341)
+.|++.++.+ .+|..|.+...++ .......+++.+++..+.
T Consensus 232 ~~~~~~~~~~----------~~p~~~~di~~~~---i~~~~~~l~~~~~~~~~~ 272 (286)
T 3c24_A 232 LNVEIAMWFG----------YSPKVPSDAALRL---MEFAKDIVVKEDWREALN 272 (286)
T ss_dssp HHHHHHHHTT----------SSCCC---CCSTT---HHHHHHHHBCTTGGGGGC
T ss_pred HHHHHHHHHh----------hCCchhHHHHHHH---HHHHHHHHhccCHHHhcC
Confidence 9999887743 5788888877776 334444466666665544
No 9
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.94 E-value=4.4e-27 Score=218.51 Aligned_cols=238 Identities=13% Similarity=0.170 Sum_probs=180.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc---cccChHHHhh-cCCEEEEeeChHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF---ALNDNHRIIK-EAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~---~~~s~~e~~~-~aDvIilaV~~~~v~~v 140 (341)
+||+|||+|+||.++++.|.++|+ ..+|++|+|++++++.+.+ +|+ ...++.+++. ++|+||+|||++.+.++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~--~~~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v 78 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGF--KGKIYGYDINPESISKAVD-LGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREI 78 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC--CSEEEEECSCHHHHHHHHH-TTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCC--CcEEEEEeCCHHHHHHHHH-CCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHH
Confidence 689999999999999999999883 2389999999998887765 565 2457778888 99999999999999999
Q ss_pred HHHhhhcccccCCCcEEEEecCCCC--HHHHHHhccccCCCCCCCCeEEEEcCCc------hhh----hcCce-EEEEeC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVGVD--LETLKKKLSVLVPNPNDAPTIIRVMPNT------AMK----YGKGI-TGMCHD 207 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~agi~--~~~l~~~l~~~~~~~~~~~~vvr~mpn~------p~~----v~~g~-~~l~~~ 207 (341)
+.++ .+.+ +++++|+++.++.. .+.+++.++ . . ++..+|.. |.. ...|. +++++.
T Consensus 79 ~~~l-~~~l--~~~~iv~~~~~~~~~~~~~l~~~l~------~--~-~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~ 146 (281)
T 2g5c_A 79 AKKL-SYIL--SEDATVTDQGSVKGKLVYDLENILG------K--R-FVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPT 146 (281)
T ss_dssp HHHH-HHHS--CTTCEEEECCSCCTHHHHHHHHHHG------G--G-EECEEEECCCSCCSGGGCCSSTTTTCEEEECCC
T ss_pred HHHH-HhhC--CCCcEEEECCCCcHHHHHHHHHhcc------c--c-ceeeccccCCccCChhhhhhHHhCCCCEEEecC
Confidence 9998 8888 78888777644332 245666665 1 2 22222211 111 12454 666665
Q ss_pred CCCCccHHHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHH-HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q psy316 208 VHLDKESEHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYL-FLVMDAMADGAVKQGIPRDMALRIGAQLLKGSG 285 (341)
Q Consensus 208 ~~~~~~~~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~-~~~~eal~ea~~~~Gl~~~~a~~lv~~~~~gs~ 285 (341)
...++ +..+.++++|+.+|..+ ++++..+|.++++++++|+|+ +.+++++ ...|++++.+..++.+++.+++
T Consensus 147 ~~~~~--~~~~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~ 220 (281)
T 2g5c_A 147 KKTDK--KRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTL----IHMSTPEVDLFKYPGGGFKDFT 220 (281)
T ss_dssp SSSCH--HHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHH----HHHCBTTBCGGGCCTTTGGGC-
T ss_pred CCCCH--HHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHH----HhcccchHHHHhhccccHHHHh
Confidence 44556 88999999999999865 567778899999999999986 4444444 4467888888899999999987
Q ss_pred HHHHhhhhhccccCCCChHHHHHhcCCCchHHHHHHHHHHh--CCchHHHH
Q psy316 286 QLVHKDLLRMDHAAQAHPAVIKDQICSPGGSTIAGIHALEK--AGVRTPFS 334 (341)
Q Consensus 286 ~l~~~~~~~~~~~~~~~p~~l~~~v~tpgG~t~~~l~~l~~--~~~~~~~~ 334 (341)
++.. .+|..|++.+++|+|+|+++|+.|++ .+++..+.
T Consensus 221 r~~~-----------~~p~~~~~~~~sn~~~~~~~l~~~~~~l~~~~~~i~ 260 (281)
T 2g5c_A 221 RIAK-----------SDPIMWRDIFLENKENVMKAIEGFEKSLNHLKELIV 260 (281)
T ss_dssp --CC-----------SCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhc-----------CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7653 48999999999999999999999999 77777664
No 10
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.94 E-value=1.7e-26 Score=215.52 Aligned_cols=238 Identities=11% Similarity=0.061 Sum_probs=181.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc---cccChHHHhhcCCEEEEeeChHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF---ALNDNHRIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~---~~~s~~e~~~~aDvIilaV~~~~v~~v 140 (341)
+|||+|||+|+||++++++|.++|+ .++|++|+|++++++.+.+ .|. .+.++.+++.++|+||+|||++.+.++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~--~~~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v 82 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHP--HYKIVGYNRSDRSRDIALE-RGIVDEATADFKVFAALADVIILAVPIKKTIDF 82 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT--TSEEEEECSSHHHHHHHHH-TTSCSEEESCTTTTGGGCSEEEECSCHHHHHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCC--CcEEEEEcCCHHHHHHHHH-cCCcccccCCHHHhhcCCCEEEEcCCHHHHHHH
Confidence 3689999999999999999998852 3589999999998887765 464 345677788999999999999999999
Q ss_pred HHHhhhcc-cccCCCcEEEEecCCCCH---HHHHHhccccCCCCCCCCeEEEEcCCchhh------hc-------Cce-E
Q psy316 141 IQGLVNDK-VTLNSSRCIISMLVGVDL---ETLKKKLSVLVPNPNDAPTIIRVMPNTAMK------YG-------KGI-T 202 (341)
Q Consensus 141 l~~i~~~~-l~~~~~~iIVs~~agi~~---~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~------v~-------~g~-~ 202 (341)
+.++ .+. + +++++|+++ ++++. +.+++.++ . . .++++|++|.. .+ .|. +
T Consensus 83 ~~~l-~~~~l--~~~~ivi~~-~~~~~~~~~~l~~~l~------~--~-~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~ 149 (290)
T 3b1f_A 83 IKIL-ADLDL--KEDVIITDA-GSTKYEIVRAAEYYLK------D--K-PVQFVGSHPMAGSHKSGAVAANVNLFENAYY 149 (290)
T ss_dssp HHHH-HTSCC--CTTCEEECC-CSCHHHHHHHHHHHHT------T--S-SCEEEEEEEC-----CCTTSCCTTTTTTSEE
T ss_pred HHHH-HhcCC--CCCCEEEEC-CCCchHHHHHHHHhcc------c--c-CCEEEEeCCcCCCCcchHHHhhHHHhCCCeE
Confidence 9999 888 8 788888866 44443 56667666 2 1 23455554441 11 343 5
Q ss_pred EEEeCCCCCccHHHHHHHHHHHHhcCCeE-EcCCCchhHHHHH-hcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q psy316 203 GMCHDVHLDKESEHLNMAIKIMEQGGIVE-IIPESMMNSFGAI-AGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQL 280 (341)
Q Consensus 203 ~l~~~~~~~~~~~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al-~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~ 280 (341)
++++....++ +..+.++++|+.+|..+ +++++.+|.+++. ++++|.+.+.+++++.+ .|++.+.+..++.++
T Consensus 150 ~~~~~~~~~~--~~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~s~~~~~~a~~~~~~~~~----~g~~~~~~~~la~~~ 223 (290)
T 3b1f_A 150 IFSPSCLTKP--NTIPALQDLLSGLHARYVEIDAAEHDCVTSQISHFPHIIASSLMKQAGD----FSESHEMTKHFAAGG 223 (290)
T ss_dssp EEEECTTCCT--THHHHHHHHTGGGCCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----HHHHCTHHHHHCCHH
T ss_pred EEecCCCCCH--HHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHh----cccchhhHHhhcccc
Confidence 6666554556 78899999999999876 5688888877444 55555555566666654 466667889999999
Q ss_pred HHHHHHHHHhhhhhccccCCCChHHHHHhcCCCchHHHHHHHHHHh--CCchHHHH
Q psy316 281 LKGSGQLVHKDLLRMDHAAQAHPAVIKDQICSPGGSTIAGIHALEK--AGVRTPFS 334 (341)
Q Consensus 281 ~~gs~~l~~~~~~~~~~~~~~~p~~l~~~v~tpgG~t~~~l~~l~~--~~~~~~~~ 334 (341)
+.++.+++. .+|..|++.+++|+|+|+++|+.|++ ..++..+.
T Consensus 224 ~~~~~rla~-----------~~p~~~~~~~~~n~~~~~~~l~~~~~~l~~~~~~l~ 268 (290)
T 3b1f_A 224 FRDMTRIAE-----------SEPGMWTSILLTNQEAVLDRIENFKQRLDEVSNLIK 268 (290)
T ss_dssp HHHTTGGGG-----------SCHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhhc-----------CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999877663 48999999999999999999999998 56766665
No 11
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.94 E-value=8e-26 Score=212.45 Aligned_cols=225 Identities=15% Similarity=0.125 Sum_probs=167.6
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 63 MWTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
|.+||+||| +|+||++++++|.++|+ +|++|+|+++. ++.+++.++|+||+|||++.+.+++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~----~V~~~~~~~~~-------------~~~~~~~~aDvVilavp~~~~~~vl 82 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGY----PISILDREDWA-------------VAESILANADVVIVSVPINLTLETI 82 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTC----CEEEECTTCGG-------------GHHHHHTTCSEEEECSCGGGHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCC----eEEEEECCccc-------------CHHHHhcCCCEEEEeCCHHHHHHHH
Confidence 557899999 99999999999999984 89999998642 4567788999999999999999999
Q ss_pred HHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchh--hhcCc-eEEEEeCCCCCccHHHHH
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAM--KYGKG-ITGMCHDVHLDKESEHLN 218 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~--~v~~g-~~~l~~~~~~~~~~~~~~ 218 (341)
.++ .+.+ +++++|+++ ++++...++..... ...+ ++..+|.... ....| .++++++. ++ +..+
T Consensus 83 ~~l-~~~l--~~~~iv~~~-~svk~~~~~~~~~~-----~~~~-~v~~hP~~g~~~~~~~g~~~~l~~~~--~~--~~~~ 148 (298)
T 2pv7_A 83 ERL-KPYL--TENMLLADL-TSVKREPLAKMLEV-----HTGA-VLGLHPMFGADIASMAKQVVVRCDGR--FP--ERYE 148 (298)
T ss_dssp HHH-GGGC--CTTSEEEEC-CSCCHHHHHHHHHH-----CSSE-EEEEEECSCTTCSCCTTCEEEEEEEE--CG--GGTH
T ss_pred HHH-Hhhc--CCCcEEEEC-CCCCcHHHHHHHHh-----cCCC-EEeeCCCCCCCchhhcCCeEEEecCC--CH--HHHH
Confidence 999 8888 778766655 67776555544331 1123 4433332111 11223 45566543 45 7788
Q ss_pred HHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHH-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHH----HHHHHHhhh
Q psy316 219 MAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLF-LVMDAMADGAVKQGIPRDMALRIGAQLLKG----SGQLVHKDL 292 (341)
Q Consensus 219 ~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~-~~~eal~ea~~~~Gl~~~~a~~lv~~~~~g----s~~l~~~~~ 292 (341)
.++++|+.+|..+ +++++.+|.++++++++|+|++ .+++++ .+.|++.+.+.+++.+++.+ +.++.
T Consensus 149 ~v~~l~~~~G~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l----~~~g~~~~~~~~la~~~f~~~~~~~~ria---- 220 (298)
T 2pv7_A 149 WLLEQIQIWGAKIYQTNATEHDHNMTYIQALRHFSTFANGLHL----SKQPINLANLLALSSPIYRLELAMIGRLF---- 220 (298)
T ss_dssp HHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHH----TTSSCCHHHHHHTCCHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHcCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH----HhcCCCHHHHHhhcCHHHHHHHHHHHHHh----
Confidence 9999999999865 5688889999999999999864 444444 35899999999999999999 55544
Q ss_pred hhccccCCCChHHHHHhcCCCchHHHHHHHHHHh--CCchHHHH
Q psy316 293 LRMDHAAQAHPAVIKDQICSPGGSTIAGIHALEK--AGVRTPFS 334 (341)
Q Consensus 293 ~~~~~~~~~~p~~l~~~v~tpgG~t~~~l~~l~~--~~~~~~~~ 334 (341)
+.+|..|++.+++|+|+|+ +|+.|++ ..++..+.
T Consensus 221 -------~~~p~~~~di~~sn~~~~~-~l~~~~~~l~~~~~~l~ 256 (298)
T 2pv7_A 221 -------AQDAELYADIIMDKSENLA-VIETLKQTYDEALTFFE 256 (298)
T ss_dssp -------TSCHHHHHHHHC----CHH-HHHHHHHHHHHHHHHHH
T ss_pred -------cCCHHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHH
Confidence 2489999999999999999 9999988 45655554
No 12
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.93 E-value=6.1e-26 Score=214.96 Aligned_cols=233 Identities=14% Similarity=0.160 Sum_probs=184.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc---cccChHH-HhhcCCEEEEeeChHHH
Q psy316 62 PMWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF---ALNDNHR-IIKEAEYVFLAMKPQYL 137 (341)
Q Consensus 62 ~m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~---~~~s~~e-~~~~aDvIilaV~~~~v 137 (341)
+|.|||+|||+|+||.+|+++|.++|+ ..+|++|||++++++.+.+ .|+ ...++.+ ++.+||+||+|||++.+
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~--~~~V~~~dr~~~~~~~a~~-~G~~~~~~~~~~~~~~~~aDvVilavp~~~~ 107 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGF--KGKIYGYDINPESISKAVD-LGIIDEGTTSIAKVEDFSPDFVMLSSPVRTF 107 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTC--CSEEEEECSCHHHHHHHHH-TTSCSEEESCTTGGGGGCCSEEEECSCGGGH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC--CCEEEEEECCHHHHHHHHH-CCCcchhcCCHHHHhhccCCEEEEeCCHHHH
Confidence 366899999999999999999999994 2389999999998887766 565 3567778 89999999999999999
Q ss_pred HHHHHHhhhcccccCCCcEEEEecCCCC---HHHHHHhccccCCCCCCCCeEEEEcCCchhhh----------cCc-eEE
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLVGVD---LETLKKKLSVLVPNPNDAPTIIRVMPNTAMKY----------GKG-ITG 203 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~agi~---~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v----------~~g-~~~ 203 (341)
.++++++ .+.+ +++++|+++. +++ .+.+++.++ . + ++..+|...... -.| .++
T Consensus 108 ~~vl~~l-~~~l--~~~~iv~d~~-Svk~~~~~~~~~~l~------~--~-~v~~hPm~G~e~sG~~~A~~~Lf~g~~~i 174 (314)
T 3ggo_A 108 REIAKKL-SYIL--SEDATVTDQG-SVKGKLVYDLENILG------K--R-FVGGHPIAGTEKSGVEYSLDNLYEGKKVI 174 (314)
T ss_dssp HHHHHHH-HHHS--CTTCEEEECC-SCCTHHHHHHHHHHG------G--G-EECEEECCCCCCCSGGGCCTTTTTTCEEE
T ss_pred HHHHHHH-hhcc--CCCcEEEECC-CCcHHHHHHHHHhcC------C--C-EEecCcccCCcccchhhhhhhhhcCCEEE
Confidence 9999999 8888 8898888874 444 455666665 2 5 666666433211 134 566
Q ss_pred EEeCCCCCccHHHHHHHHHHHHhcCCe-EEcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy316 204 MCHDVHLDKESEHLNMAIKIMEQGGIV-EIIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQLLK 282 (341)
Q Consensus 204 l~~~~~~~~~~~~~~~v~~ll~~lG~~-~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~~~ 282 (341)
+++++..++ +.++.++++|+.+|.. ++++++.+|.++++++++|++++.. |.....+.+.+.+.+.++..++|+
T Consensus 175 l~~~~~~~~--~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph~~a~~---l~~~~~~~~~~~~~~~~~a~~~fr 249 (314)
T 3ggo_A 175 LTPTKKTDK--KRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFA---LVDTLIHMSTPEVDLFKYPGGGFK 249 (314)
T ss_dssp ECCCTTSCH--HHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHH---HHHHHHHHCCSSCCGGGCCTTTTT
T ss_pred EEeCCCCCH--HHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHH---HHHHHHhcCcchHHHHhhccccHH
Confidence 777665666 8999999999999986 4579999999999999999988653 444444556666677788889999
Q ss_pred HHHHHHHhhhhhccccCCCChHHHHHhcCCCchHHHHHHHHHHh
Q psy316 283 GSGQLVHKDLLRMDHAAQAHPAVIKDQICSPGGSTIAGIHALEK 326 (341)
Q Consensus 283 gs~~l~~~~~~~~~~~~~~~p~~l~~~v~tpgG~t~~~l~~l~~ 326 (341)
+..++.. .+|..|.+.+.++.+.+.+.|+.+++
T Consensus 250 d~tRia~-----------~~p~~w~di~~~N~~~~~~~l~~~~~ 282 (314)
T 3ggo_A 250 DFTRIAK-----------SDPIMWRDIFLENKENVMKAIEGFEK 282 (314)
T ss_dssp THHHHTT-----------SCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHhc-----------CCHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 8877653 38999999999999988888888876
No 13
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.93 E-value=1.8e-25 Score=219.27 Aligned_cols=205 Identities=16% Similarity=0.227 Sum_probs=167.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhc------CCCCCCeEEEEcCChhhhhhcCcCCCc-c----ccChHHHhhcCCEEEEeeC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRT------GLCIPAQIIASAPSERFKLHWPEPMDF-A----LNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~------G~~~~~~V~v~~r~~e~~~~l~~~~g~-~----~~s~~e~~~~aDvIilaV~ 133 (341)
+||+|||+|+||.+++++|.++ |+ +|+++.|+..+....+.+.|+ . ..++.+++++||+||++||
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~----~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP 130 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDI----VVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLIS 130 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCC----EEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECSC
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCC----EEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECCC
Confidence 7999999999999999999999 85 888776654333222223576 3 2688999999999999999
Q ss_pred hHHHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHH---hccccCCCCCCCCeEEEEcCCchhhh-------c-----
Q psy316 134 PQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKK---KLSVLVPNPNDAPTIIRVMPNTAMKY-------G----- 198 (341)
Q Consensus 134 ~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~---~l~~~~~~~~~~~~vvr~mpn~p~~v-------~----- 198 (341)
++...+++.++ .+.+ +++++ |++++|+++..+++ .++ .+.+ |+|+|||+|... +
T Consensus 131 ~~~~~eVl~eI-~p~L--K~GaI-Ls~AaGf~I~~le~~~i~~p------~dv~-VVrVmPNtPg~~VR~~y~~G~~~~g 199 (525)
T 3fr7_A 131 DAAQADNYEKI-FSHM--KPNSI-LGLSHGFLLGHLQSAGLDFP------KNIS-VIAVCPKGMGPSVRRLYVQGKEING 199 (525)
T ss_dssp HHHHHHHHHHH-HHHS--CTTCE-EEESSSHHHHHHHHTTCCCC------TTSE-EEEEEESSCHHHHHHHHHHHTTSTT
T ss_pred hHHHHHHHHHH-HHhc--CCCCe-EEEeCCCCHHHHhhhcccCC------CCCc-EEEEecCCCchhHHHHHhccccccc
Confidence 99888999999 9999 88887 68889999988876 444 4678 999999999986 5
Q ss_pred CceE-EEEeCCCCCccHHHHHHHHHHHHhcCCeEEc--------CCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCC
Q psy316 199 KGIT-GMCHDVHLDKESEHLNMAIKIMEQGGIVEII--------PESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIP 269 (341)
Q Consensus 199 ~g~~-~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v--------~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~ 269 (341)
+|++ .++...+.+. +..+.+..++..+|....+ .+++++..++++|++|+|+ +++.+++++.|++
T Consensus 200 ~Gv~~liAv~qd~tg--ea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqtvLsG~~pAli----eA~~d~lVe~G~~ 273 (525)
T 3fr7_A 200 AGINSSFAVHQDVDG--RATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIV----EALFRRYTEQGMD 273 (525)
T ss_dssp CSCCEEEEEEECSSS--CHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHTTTTHHHHHHH----HHHHHHHHHTTCC
T ss_pred CCccEEEEcCCCCCH--HHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHhhhcCcHHHHH----HHHHHHHHHcCCC
Confidence 7877 5555455666 7889999999999986432 1347778889999999965 7888888999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHh
Q psy316 270 RDMALRIGAQLLK-GSGQLVHK 290 (341)
Q Consensus 270 ~~~a~~lv~~~~~-gs~~l~~~ 290 (341)
++.|+.+..+++. +.+.|+.+
T Consensus 274 pe~Ay~~~~qel~~~i~~li~e 295 (525)
T 3fr7_A 274 EEMAYKNTVEGITGIISKTISK 295 (525)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 99999877
No 14
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.92 E-value=2.1e-24 Score=206.32 Aligned_cols=225 Identities=13% Similarity=0.109 Sum_probs=173.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhc----CCEEEEeeChHH
Q psy316 62 PMWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKE----AEYVFLAMKPQY 136 (341)
Q Consensus 62 ~m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~----aDvIilaV~~~~ 136 (341)
++.+||+|||+|+||++|+++|.++|+ +|++|||++++++.+.+ +|+ ...++.+++.+ +|+||+|||++.
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~~G~----~V~~~dr~~~~~~~a~~-~G~~~~~~~~e~~~~a~~~aDlVilavP~~~ 80 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHAANH----SVFGYNRSRSGAKSAVD-EGFDVSADLEATLQRAAAEDALIVLAVPMTA 80 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTTC----CEEEECSCHHHHHHHHH-TTCCEESCHHHHHHHHHHTTCEEEECSCHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHH-cCCeeeCCHHHHHHhcccCCCEEEEeCCHHH
Confidence 356799999999999999999999984 99999999998887766 687 66777777664 799999999999
Q ss_pred HHHHHHHhhhcccccCCCcEEEEecCCCCHHHH---HHhccccCCCCCCCCeEEEEcCCchhhhc-------------Cc
Q psy316 137 LDSAIQGLVNDKVTLNSSRCIISMLVGVDLETL---KKKLSVLVPNPNDAPTIIRVMPNTAMKYG-------------KG 200 (341)
Q Consensus 137 v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l---~~~l~~~~~~~~~~~~vvr~mpn~p~~v~-------------~g 200 (341)
+.++++++ .+. +++++|+++ ++++...+ ++.++ +.+ ++ |++|.... .|
T Consensus 81 ~~~vl~~l-~~~---~~~~iv~Dv-~Svk~~i~~~~~~~~~-------~~~-~v---~~HPmaG~e~sG~~aa~~~Lf~g 144 (341)
T 3ktd_A 81 IDSLLDAV-HTH---APNNGFTDV-VSVKTAVYDAVKARNM-------QHR-YV---GSHPMAGTANSGWSASMDGLFKR 144 (341)
T ss_dssp HHHHHHHH-HHH---CTTCCEEEC-CSCSHHHHHHHHHTTC-------GGG-EE---CEEECCSCC-CCGGGCCSSTTTT
T ss_pred HHHHHHHH-Hcc---CCCCEEEEc-CCCChHHHHHHHHhCC-------CCc-Ee---cCCccccccccchhhhhhHHhcC
Confidence 99999998 774 577777765 66765543 33332 123 33 44443321 12
Q ss_pred -eEEEEeCCCCCccHH--------HHHHHHHHHHhcCC-eEEcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCH
Q psy316 201 -ITGMCHDVHLDKESE--------HLNMAIKIMEQGGI-VEIIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPR 270 (341)
Q Consensus 201 -~~~l~~~~~~~~~~~--------~~~~v~~ll~~lG~-~~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~ 270 (341)
.+++++++..++ + .++.++++|+.+|. +++++++.||.++++++++|++++.. |+..... +.
T Consensus 145 ~~~iltp~~~~~~--e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia~a---L~~~~~~---~~ 216 (341)
T 3ktd_A 145 AVWVVTFDQLFDG--TDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAET---LAIVGDN---GG 216 (341)
T ss_dssp CEEEECCGGGTSS--CCCCHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHH---HHHHHHH---TH
T ss_pred CeEEEEeCCCCCh--hhhccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHHHH---HHHHhhc---ch
Confidence 467777655555 6 78999999999995 45679999999999999999988774 3443322 24
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccCCCChHHHHHhcCCCchHHHHHHHHHHh
Q psy316 271 DMALRIGAQLLKGSGQLVHKDLLRMDHAAQAHPAVIKDQICSPGGSTIAGIHALEK 326 (341)
Q Consensus 271 ~~a~~lv~~~~~gs~~l~~~~~~~~~~~~~~~p~~l~~~v~tpgG~t~~~l~~l~~ 326 (341)
+.+..+..++|++..++.. .+|..|.+.+.+|.+.+.+.|+.|++
T Consensus 217 ~~~~~laa~gfrd~tRia~-----------s~p~lw~di~~~N~~~~~~~l~~~~~ 261 (341)
T 3ktd_A 217 ALSLSLAAGSYRDSTRVAG-----------TDPGLVRAMCESNAGPLVKALDEALA 261 (341)
T ss_dssp HHHHHHCCHHHHHHTGGGG-----------SCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHccccHHHHHHHhc-----------CCHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 6778888889988777543 48999999999999999999988877
No 15
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.91 E-value=2.1e-24 Score=200.51 Aligned_cols=223 Identities=16% Similarity=0.085 Sum_probs=158.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
|+|||+|||+|+||.+|+++|.++ + +| .+|+|++++++.+.+++|..+.++.++++++|+||+|||++.+.+++
T Consensus 1 M~m~I~iIG~G~mG~~la~~l~~~-~----~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~~~~v~ 75 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRFFLECLKDR-Y----EIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRYIKTVA 75 (276)
T ss_dssp ---CCEEESCCHHHHHHHHTTC---------CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTTHHHHH
T ss_pred CCceEEEEeCCHHHHHHHHHHHHc-C----cEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHHHHHHH
Confidence 567999999999999999999776 4 78 59999999988876545543345666778899999999999999998
Q ss_pred HHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhc--CceEEEEeCCCCCccHHHHHH
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYG--KGITGMCHDVHLDKESEHLNM 219 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~--~g~~~l~~~~~~~~~~~~~~~ 219 (341)
.++ . . ++++||+++++++.+.++.... .... .++.+||.|..++ .+......++ + +.++.
T Consensus 76 ~~l-~--~---~~~ivi~~s~~~~~~~l~~~~~------~~~~-p~~~~~g~~~~~~~~~~~~~~~~~~---~--~~~~~ 137 (276)
T 2i76_A 76 NHL-N--L---GDAVLVHCSGFLSSEIFKKSGR------ASIH-PNFSFSSLEKALEMKDQIVFGLEGD---E--RGLPI 137 (276)
T ss_dssp TTT-C--C---SSCCEEECCSSSCGGGGCSSSE------EEEE-ECSCC--CTTGGGCGGGCCEEECCC---T--TTHHH
T ss_pred HHh-c--c---CCCEEEECCCCCcHHHHHHhhc------cccc-hhhhcCCCchhHHHhCCCeEEEEeC---h--HHHHH
Confidence 887 4 2 6789999988888776554321 0001 1224566555443 3443444332 3 56889
Q ss_pred HHHHHHhcCC-eEEcCCC---chhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy316 220 AIKIMEQGGI-VEIIPES---MMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQLLKGSGQLVHKDLLRM 295 (341)
Q Consensus 220 v~~ll~~lG~-~~~v~e~---~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~~~gs~~l~~~~~~~~ 295 (341)
++++|+.+|. +++++++ .++..++++++++.+++..+. ..+.+.|++++++. +.+++.++..++.+
T Consensus 138 ~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n~~~~~~~~a~---~~~~~~Gl~~~~a~--~~~l~~~~~~~~~~----- 207 (276)
T 2i76_A 138 VKKIAEEISGKYFVIPSEKKKAYHLAAVIASNFPVALAYLSK---RIYTLLGLDEPELL--IHTLMKGVADNIKK----- 207 (276)
T ss_dssp HHHHHHHHCSCEEECCGGGHHHHHHHHHHHHTTHHHHHHHHH---HHHHTTTCSCHHHH--HHHHHHHHHHHHHH-----
T ss_pred HHHHHHHhCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHcCCChHHHH--HHHHHHHHHHHHHh-----
Confidence 9999999995 6778765 467788888888876655443 34567999999875 88899999999887
Q ss_pred cccCCCChHHHHHhcCCCc-----hHHHHHHHHHHh
Q psy316 296 DHAAQAHPAVIKDQICSPG-----GSTIAGIHALEK 326 (341)
Q Consensus 296 ~~~~~~~p~~l~~~v~tpg-----G~t~~~l~~l~~ 326 (341)
.+ | .+.+++|+ |+|+.+|+.|++
T Consensus 208 ---~g--p---~~~~tgP~~r~D~~t~~~~l~~l~~ 235 (276)
T 2i76_A 208 ---MR--V---ECSLTGPVKRGDWQVVEEERREYEK 235 (276)
T ss_dssp ---SC--G---GGGCCSHHHHTCHHHHHHHHHHHHH
T ss_pred ---cC--h---HhhCCCCcccCCHHHHHHHHHHHhc
Confidence 55 4 78899998 999999999998
No 16
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.90 E-value=3.8e-23 Score=197.62 Aligned_cols=220 Identities=15% Similarity=0.220 Sum_probs=167.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhh-hhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERF-KLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~-~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
.|||+|||+|+||++++++|.++|+ +|++++|++++ .+...+ .|+ .. ++.++++++|+||+|||++...+++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~----~V~~~~~~~~~~~~~a~~-~G~~~~-~~~e~~~~aDvVilavp~~~~~~v~ 89 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGV----DVTVGLRSGSATVAKAEA-HGLKVA-DVKTAVAAADVVMILTPDEFQGRLY 89 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTC----CEEEECCTTCHHHHHHHH-TTCEEE-CHHHHHHTCSEEEECSCHHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCcC----EEEEEECChHHHHHHHHH-CCCEEc-cHHHHHhcCCEEEEeCCcHHHHHHH
Confidence 4689999999999999999999985 89999998765 444433 577 54 7888899999999999999999999
Q ss_pred H-HhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhh-------hcCceEEE-EeCCCCCc
Q psy316 142 Q-GLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMK-------YGKGITGM-CHDVHLDK 212 (341)
Q Consensus 142 ~-~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~-------v~~g~~~l-~~~~~~~~ 212 (341)
. ++ .+.+ +++++|+++ +|++. .+..... +.+.. +++.+|+.|.. .|.|...+ ++....+.
T Consensus 90 ~~~i-~~~l--~~~~ivi~~-~gv~~-~~~~~~~-----~~~~~-vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~~~ 158 (338)
T 1np3_A 90 KEEI-EPNL--KKGATLAFA-HGFSI-HYNQVVP-----RADLD-VIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDASG 158 (338)
T ss_dssp HHHT-GGGC--CTTCEEEES-CCHHH-HTTSSCC-----CTTCE-EEEEEESSCSHHHHHHHHTTCCCCEEEEEEECSSS
T ss_pred HHHH-HhhC--CCCCEEEEc-CCchh-HHHhhcC-----CCCcE-EEeccCCCCchhHHHHHhccCCCeEEEEecCCCCH
Confidence 8 99 8888 888898875 66554 3333221 03456 88999988764 45565544 55444455
Q ss_pred cHHHHHHHHHHHHhcCC----eEEcC---CCchhHH---HHHhcchHHHHHHHHHHHHHHHHHcCCCHHHH-------HH
Q psy316 213 ESEHLNMAIKIMEQGGI----VEIIP---ESMMNSF---GAIAGSGCAYLFLVMDAMADGAVKQGIPRDMA-------LR 275 (341)
Q Consensus 213 ~~~~~~~v~~ll~~lG~----~~~v~---e~~~d~~---~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a-------~~ 275 (341)
+..+.+..+++.+|. +++++ ++.++.+ ++++|++|++++..++.|. +.|++++.+ .+
T Consensus 159 --~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~----~~Gl~~~~a~~e~~~~~~ 232 (338)
T 1np3_A 159 --NAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLV----EAGYAPEMAYFECLHELK 232 (338)
T ss_dssp --CHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHH----HTTCCHHHHHHHHTTTHH
T ss_pred --HHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHH----HcCCCHHHHHHHhhhHHH
Confidence 778899999999998 45554 3445555 3677889999888776654 689999988 78
Q ss_pred HHHHH-HHHHHHHHHhhhhhccccCCCChHHHHHhcCCCc
Q psy316 276 IGAQL-LKGSGQLVHKDLLRMDHAAQAHPAVIKDQICSPG 314 (341)
Q Consensus 276 lv~~~-~~gs~~l~~~~~~~~~~~~~~~p~~l~~~v~tpg 314 (341)
++.++ ..|+...++. .+.+|.+|.+.+++|+
T Consensus 233 ~~~~~~~~gg~~~~r~--------a~s~p~~~~d~~~~~~ 264 (338)
T 1np3_A 233 LIVDLMYEGGIANMNY--------SISNNAEYGEYVTGPE 264 (338)
T ss_dssp HHHHHHHHHHHHHHHH--------HSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHH--------hcCCHHHHhhhhcCCc
Confidence 88888 5676333355 6779999999999996
No 17
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.88 E-value=1.3e-21 Score=183.74 Aligned_cols=228 Identities=14% Similarity=0.125 Sum_probs=152.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeCh-HHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKP-QYLDSA 140 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~-~~v~~v 140 (341)
|.+||||||+|+||.+|+++|+++|+ +|++|||++++.+.+.+ .|. ...++.|+++.+|+||+|+|+ .+++++
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~----~V~v~dr~~~~~~~l~~-~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v 78 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGY----ELVVWNRTASKAEPLTK-LGATVVENAIDAITPGGIVFSVLADDAAVEEL 78 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTC----EEEEC-------CTTTT-TTCEECSSGGGGCCTTCEEEECCSSHHHHHHH
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHH-cCCeEeCCHHHHHhcCCceeeeccchhhHHHH
Confidence 88899999999999999999999995 99999999999999988 588 888999999999999999986 456666
Q ss_pred H-HHhhhcccccCCCcEEEEecCCCCHHHH---HHhccccCCCCCCCCeEEEE-cCCchhhhcCc-eEEEEeCCCCCccH
Q psy316 141 I-QGLVNDKVTLNSSRCIISMLVGVDLETL---KKKLSVLVPNPNDAPTIIRV-MPNTAMKYGKG-ITGMCHDVHLDKES 214 (341)
Q Consensus 141 l-~~i~~~~l~~~~~~iIVs~~agi~~~~l---~~~l~~~~~~~~~~~~vvr~-mpn~p~~v~~g-~~~l~~~~~~~~~~ 214 (341)
+ .++ .+.+ .+++++|+++ .++++.. .+.+.. .+.. ++.+ +...|.....| .++++.++ +
T Consensus 79 ~~~~~-~~~~--~~~~iiid~s-T~~p~~~~~~~~~~~~-----~g~~-~ldapVsGg~~~a~~g~l~im~gG~---~-- 143 (297)
T 4gbj_A 79 FSMEL-VEKL--GKDGVHVSMS-TISPETSRQLAQVHEW-----YGAH-YVGAPIFARPEAVRAKVGNICLSGN---A-- 143 (297)
T ss_dssp SCHHH-HHHH--CTTCEEEECS-CCCHHHHHHHHHHHHH-----TTCE-EEECCEECCHHHHHHTCCEEEEEEC---H--
T ss_pred HHHHH-Hhhc--CCCeEEEECC-CCChHHHHHHHHHHHh-----cCCc-eecCCcCCCccccccccceeecccc---h--
Confidence 5 345 6667 7889999874 5565443 333331 2333 3321 11233333344 35666664 3
Q ss_pred HHHHHHHHHHHhcCCeE-EcCC-CchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHH
Q psy316 215 EHLNMAIKIMEQGGIVE-IIPE-SMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLLKGSGQLVH 289 (341)
Q Consensus 215 ~~~~~v~~ll~~lG~~~-~v~e-~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~~gs~~l~~ 289 (341)
+.++.++++|+.+|..+ ++.+ ......+.+. .+.+.+..+.++.|+ +.+.|++++++++++..+..++.. +.
T Consensus 144 ~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~--~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~s~~-~~ 220 (297)
T 4gbj_A 144 GAKERIKPIVENFVKGVFDFGDDPGAANVIKLA--GNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFAAPI-FQ 220 (297)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTCSHH-HH
T ss_pred hHHHHHHHHHHHhhCCeEEecCCccHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccCch-hh
Confidence 88999999999999865 4554 3444445543 345666666667665 569999999999999887766533 33
Q ss_pred hhhhhccccCCCChHHHHHhcCCC-chHHHHHHHHH
Q psy316 290 KDLLRMDHAAQAHPAVIKDQICSP-GGSTIAGIHAL 324 (341)
Q Consensus 290 ~~~~~~~~~~~~~p~~l~~~v~tp-gG~t~~~l~~l 324 (341)
. ....+.+.-+.| +++....++.|
T Consensus 221 ~-----------~~~~~~~~~~~p~~f~~~l~~KDl 245 (297)
T 4gbj_A 221 N-----------YGKLVASNTYEPVAFRFPLGLKDI 245 (297)
T ss_dssp H-----------HHHHHHHTCCCSCSSBHHHHHHHH
T ss_pred c-----------cCccccCCCCCCccchhHHHHHHH
Confidence 3 344455555565 44555555544
No 18
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.88 E-value=1.5e-21 Score=183.62 Aligned_cols=233 Identities=14% Similarity=0.110 Sum_probs=160.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeCh-HHHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKP-QYLDSAIQ 142 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~-~~v~~vl~ 142 (341)
+||||||+|+||.+|+++|+++|+ +|++|||++++++.+.+ .|. ...++.|+++.+|+||+|+|. .++++|+.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~----~v~v~dr~~~~~~~l~~-~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~ 78 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY----LLNVFDLVQSAVDGLVA-AGASAARSARDAVQGADVVISMLPASQHVEGLYL 78 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC----EEEEECSSHHHHHHHHH-TTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC----eEEEEcCCHHHHHHHHH-cCCEEcCCHHHHHhcCCceeecCCchHHHHHHHh
Confidence 589999999999999999999995 99999999999999988 488 888999999999999999984 67889986
Q ss_pred H---hhhcccccCCCcEEEEecCCCCHHH---HHHhccccCCCCCCCCeEEEE-cCCchhhhcCc-eEEEEeCCCCCccH
Q psy316 143 G---LVNDKVTLNSSRCIISMLVGVDLET---LKKKLSVLVPNPNDAPTIIRV-MPNTAMKYGKG-ITGMCHDVHLDKES 214 (341)
Q Consensus 143 ~---i~~~~l~~~~~~iIVs~~agi~~~~---l~~~l~~~~~~~~~~~~vvr~-mpn~p~~v~~g-~~~l~~~~~~~~~~ 214 (341)
. + .+.+ +++++||+++ .++++. +.+++.. .+.. ++.+ +...|.....| .++++.|+ +
T Consensus 79 ~~~g~-~~~~--~~g~iiId~s-T~~p~~~~~~a~~~~~-----~G~~-~lDaPVsGg~~~A~~G~L~imvGG~---~-- 143 (300)
T 3obb_A 79 DDDGL-LAHI--APGTLVLECS-TIAPTSARKIHAAARE-----RGLA-MLDAPVSGGTAGAAAGTLTFMVGGD---A-- 143 (300)
T ss_dssp SSSSS-TTSC--CC-CEEEECS-CCCHHHHHHHHHHHHT-----TTCE-EEECCEESCHHHHHHTCEEEEEESC---H--
T ss_pred chhhh-hhcC--CCCCEEEECC-CCCHHHHHHHHHHHHH-----cCCE-EEecCCCCCHHHHHhCCEEEEEeCC---H--
Confidence 5 4 5556 7899999884 456543 3444432 2333 3332 11233333445 56777775 4
Q ss_pred HHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHh
Q psy316 215 EHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLLKGSGQLVHK 290 (341)
Q Consensus 215 ~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~~gs~~l~~~ 290 (341)
+.++.++++|+.+|..+ ++++..-...+.++. +.+++..+.++.|+ +.+.|++++...+++..+..++..+-..
T Consensus 144 ~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~--N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~~~~~s~~~~~~ 221 (300)
T 3obb_A 144 EALEKARPLFEAMGRNIFHAGPDGAGQVAKVCN--NQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVY 221 (300)
T ss_dssp HHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhCcccchHHHhh
Confidence 88999999999999864 567654445555433 45555556666665 5699999999999998876665443322
Q ss_pred hhhhccccCCCChHHHHHhcCCCchHHHHHHHHH
Q psy316 291 DLLRMDHAAQAHPAVIKDQICSPGGSTIAGIHAL 324 (341)
Q Consensus 291 ~~~~~~~~~~~~p~~l~~~v~tpgG~t~~~l~~l 324 (341)
.+. .......+.....+|+++....++.+
T Consensus 222 -~p~----~~~~~~~~~~~~~~~~f~~~l~~KDl 250 (300)
T 3obb_A 222 -NPW----PGVMENAPASRDYSGGFMAQLMAKDL 250 (300)
T ss_dssp -CCS----TTTSTTSGGGGTTCSSSBHHHHHHHH
T ss_pred -ccc----cchhhhccccccCCccchHHHHHHHH
Confidence 000 00111233445566766665555544
No 19
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.88 E-value=1.6e-21 Score=182.25 Aligned_cols=242 Identities=17% Similarity=0.236 Sum_probs=170.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeC-hHHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMK-PQYLDSA 140 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~-~~~v~~v 140 (341)
|+|||+|||+|+||..++..|.++|+ +|++|+|++++++.+.+. |+ ...++.+++.++|+||+||| +.+++.+
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~ 78 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAGY----SLVVSDRNPEAIADVIAA-GAETASTAKAIAEQCDVIITMLPNSPHVKEV 78 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTC----EEEEECSCHHHHHHHHHT-TCEECSSHHHHHHHCSEEEECCSSHHHHHHH
T ss_pred ccceEEEECchHHHHHHHHHHHhCCC----EEEEEeCCHHHHHHHHHC-CCeecCCHHHHHhCCCEEEEECCCHHHHHHH
Confidence 67899999999999999999999984 899999999999888774 77 67788888999999999999 7788999
Q ss_pred H---HHhhhcccccCCCcEEEEecCCCC--HHHHHHhccccCCCCCCCCeEEEE--cCCchhhhcCceEEEEeCCCCCcc
Q psy316 141 I---QGLVNDKVTLNSSRCIISMLVGVD--LETLKKKLSVLVPNPNDAPTIIRV--MPNTAMKYGKGITGMCHDVHLDKE 213 (341)
Q Consensus 141 l---~~i~~~~l~~~~~~iIVs~~agi~--~~~l~~~l~~~~~~~~~~~~vvr~--mpn~p~~v~~g~~~l~~~~~~~~~ 213 (341)
+ +++ .+.+ +++++||+++++.+ .+.+.+.++. .+.. ++.. +++.+.....+.++++.+ ++
T Consensus 79 ~~~~~~l-~~~l--~~~~~vv~~s~~~~~~~~~l~~~~~~-----~g~~-~~~~pv~~~~~~~~~~~~~~~~~~---~~- 145 (299)
T 1vpd_A 79 ALGENGI-IEGA--KPGTVLIDMSSIAPLASREISDALKA-----KGVE-MLDAPVSGGEPKAIDGTLSVMVGG---DK- 145 (299)
T ss_dssp HHSTTCH-HHHC--CTTCEEEECSCCCHHHHHHHHHHHHT-----TTCE-EEECCEESHHHHHHHTCEEEEEES---CH-
T ss_pred HhCcchH-hhcC--CCCCEEEECCCCCHHHHHHHHHHHHH-----cCCe-EEEecCCCCHhHHhcCCEEEEeCC---CH-
Confidence 8 677 7778 78999999987764 3566666652 2233 3332 444555555556666665 34
Q ss_pred HHHHHHHHHHHHhcCCeEE-cCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHH
Q psy316 214 SEHLNMAIKIMEQGGIVEI-IPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLLKGSGQLVH 289 (341)
Q Consensus 214 ~~~~~~v~~ll~~lG~~~~-v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~~gs~~l~~ 289 (341)
+..+.++++|+.+|..++ +++.....+..+.. +.+.+.++..+.|+ +.+.|++++++.+++.++..++..+..
T Consensus 146 -~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~--n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~ 222 (299)
T 1vpd_A 146 -AIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLAN--QVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDA 222 (299)
T ss_dssp -HHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHH
T ss_pred -HHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCCCCHHHHH
Confidence 788999999999998655 46655555555533 45666677777776 679999999999988877655443321
Q ss_pred hhhhhccccCCCChHHHHHhcCCCchHHHHH-------HHHHHhCCchHHHHHHH
Q psy316 290 KDLLRMDHAAQAHPAVIKDQICSPGGSTIAG-------IHALEKAGVRTPFSSAA 337 (341)
Q Consensus 290 ~~~~~~~~~~~~~p~~l~~~v~tpgG~t~~~-------l~~l~~~~~~~~~~~a~ 337 (341)
. .|..+.+. .+||+.+... ++..++.|+..-+.+++
T Consensus 223 ~-----------~~~~l~~~-~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~ 265 (299)
T 1vpd_A 223 K-----------APMVMDRN-FKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAV 265 (299)
T ss_dssp H-----------HHHHHTTC-CCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHH
T ss_pred h-----------hhHhhcCC-CCCCCChHHHHHHHHHHHHHHHHcCCCChHHHHH
Confidence 1 34444444 3566544332 33345556555444443
No 20
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.87 E-value=3.6e-21 Score=181.60 Aligned_cols=241 Identities=14% Similarity=0.187 Sum_probs=173.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeC-hHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMK-PQYLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~-~~~v~~vl 141 (341)
.|||+|||+|+||+.+++.|.+.|+ +|++|+|++++++.+.+ .|+ ...++.+++.++|+||+||| +.++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~----~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~ 104 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGH----TVTVWNRTAEKCDLFIQ-EGARLGRTPAEVVSTCDITFACVSDPKAAKDLV 104 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTC----CEEEECSSGGGGHHHHH-TTCEECSCHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCC----EEEEEeCCHHHHHHHHH-cCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHH
Confidence 4789999999999999999999984 89999999999888876 577 66788888999999999999 89999998
Q ss_pred HHhhh---cccccCCCcEEEEecCCCC--HHHHHHhccccCCCCCCCCeEEE-EcCCchhhhcCceEEEE-eCCCCCccH
Q psy316 142 QGLVN---DKVTLNSSRCIISMLVGVD--LETLKKKLSVLVPNPNDAPTIIR-VMPNTAMKYGKGITGMC-HDVHLDKES 214 (341)
Q Consensus 142 ~~i~~---~~l~~~~~~iIVs~~agi~--~~~l~~~l~~~~~~~~~~~~vvr-~mpn~p~~v~~g~~~l~-~~~~~~~~~ 214 (341)
.++ . +.+ .++++||+++++.+ .+.+.+.++. .+.. ++. .+++.+...+.|.+.++ .+ ++
T Consensus 105 ~~~-~~~~~~l--~~~~~vv~~s~~~~~~~~~l~~~~~~-----~~~~-~v~~p~~g~~~~~~~g~~~~~~~g---~~-- 170 (316)
T 2uyy_A 105 LGP-SGVLQGI--RPGKCYVDMSTVDADTVTELAQVIVS-----RGGR-FLEAPVSGNQQLSNDGMLVILAAG---DR-- 170 (316)
T ss_dssp HST-TCGGGGC--CTTCEEEECSCCCHHHHHHHHHHHHH-----TTCE-EEECCEESCHHHHHHTCEEEEEEE---CH--
T ss_pred cCc-hhHhhcC--CCCCEEEECCCCCHHHHHHHHHHHHH-----cCCE-EEEcCccCChhHHhhCCEEEEeCC---CH--
Confidence 765 4 566 78899998866432 3445555541 2334 443 34455555566654443 44 24
Q ss_pred HHHHHHHHHHHhcCCeEEc-CCCc-----hhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Q psy316 215 EHLNMAIKIMEQGGIVEII-PESM-----MNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQLLKGSGQLV 288 (341)
Q Consensus 215 ~~~~~v~~ll~~lG~~~~v-~e~~-----~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~~~gs~~l~ 288 (341)
+..+.++++|+.+|..+++ ++.. .....++.+ .+++.+.|++.. +.+.|++++++.+++.++..++..+.
T Consensus 171 ~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~~---~~~~~~~Ea~~l-a~~~G~~~~~~~~~~~~~~~~s~~~~ 246 (316)
T 2uyy_A 171 GLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQG---SFMATIAEGLTL-AQVTGQSQQTLLDILNQGQLASIFLD 246 (316)
T ss_dssp HHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHH---HHHHHHHHHHHH-HHHTTCCHHHHHHHHHHSTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHH-HHHcCCCHHHHHHHHHcCCCCCHHHH
Confidence 7888999999999987654 4422 122222222 356677777776 78999999999999988776665544
Q ss_pred HhhhhhccccCCCChHHHHHhcCCCchHHHH-------HHHHHHhCCchHHHHHHHHh
Q psy316 289 HKDLLRMDHAAQAHPAVIKDQICSPGGSTIA-------GIHALEKAGVRTPFSSAARR 339 (341)
Q Consensus 289 ~~~~~~~~~~~~~~p~~l~~~v~tpgG~t~~-------~l~~l~~~~~~~~~~~a~~~ 339 (341)
.. .|..+.+. .+||++++. .++..++.|+...+.+++.+
T Consensus 247 ~~-----------~~~~l~~~-~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~ 292 (316)
T 2uyy_A 247 QK-----------CQNILQGN-FKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANE 292 (316)
T ss_dssp HH-----------HHHHHHTC-CCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred Hh-----------hHHhhcCC-CCCCCcHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 33 35555554 578888877 56667888888877777654
No 21
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.86 E-value=2.8e-20 Score=175.21 Aligned_cols=240 Identities=12% Similarity=0.104 Sum_probs=162.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSA 140 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~v 140 (341)
+.+||+|||+|+||.+|+++|.++|+ +|++|||++++++.+.+ .|+ ...++.++++++|+||+|||+. +++++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~----~V~~~dr~~~~~~~~~~-~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v 82 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK----RVAIWNRSPGKAAALVA-AGAHLCESVKAALSASPATIFVLLDNHATHEV 82 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC----CEEEECSSHHHHHHHHH-HTCEECSSHHHHHHHSSEEEECCSSHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHH-CCCeecCCHHHHHhcCCEEEEEeCCHHHHHHH
Confidence 56799999999999999999999995 99999999999998877 477 7788999999999999999954 68888
Q ss_pred HH--HhhhcccccCCCcEEEEecCCCCH--HHHHHhccccCCCCCCCCeEEEE--cCCchhhhcCceEEEEeCCCCCccH
Q psy316 141 IQ--GLVNDKVTLNSSRCIISMLVGVDL--ETLKKKLSVLVPNPNDAPTIIRV--MPNTAMKYGKGITGMCHDVHLDKES 214 (341)
Q Consensus 141 l~--~i~~~~l~~~~~~iIVs~~agi~~--~~l~~~l~~~~~~~~~~~~vvr~--mpn~p~~v~~g~~~l~~~~~~~~~~ 214 (341)
+. .+ .+ + .++++||++++..+. ..+.+.+.. .+.. ++.. +...|.....+.++++.++ +
T Consensus 83 ~~~~~l-~~-~--~~g~ivid~st~~~~~~~~l~~~~~~-----~g~~-~vdapv~g~~~~~~~~~~~i~~gg~---~-- 147 (306)
T 3l6d_A 83 LGMPGV-AR-A--LAHRTIVDYTTNAQDEGLALQGLVNQ-----AGGH-YVKGMIVAYPRNVGHRESHSIHTGD---R-- 147 (306)
T ss_dssp HTSTTH-HH-H--TTTCEEEECCCCCTTHHHHHHHHHHH-----TTCE-EEEEEEESCGGGTTCTTCEEEEEEC---H--
T ss_pred hcccch-hh-c--cCCCEEEECCCCCHHHHHHHHHHHHH-----cCCe-EEecccccCcccccCCceEEEEcCC---H--
Confidence 86 56 55 4 588899988554332 344444431 2334 4443 1112222222456666664 4
Q ss_pred HHHHHHHHHHHhcCC-eEEc--CCC-chhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHH-HHHH
Q psy316 215 EHLNMAIKIMEQGGI-VEII--PES-MMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLLK-GSGQ 286 (341)
Q Consensus 215 ~~~~~v~~ll~~lG~-~~~v--~e~-~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~~-gs~~ 286 (341)
+.++.++++|+.+|. ++++ +++ .-..... .+++..+.++.|+ +.+.|++++++.+++.++.. +...
T Consensus 148 ~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k------~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~~~~~~s~ 221 (306)
T 3l6d_A 148 EAFEQHRALLEGLAGHTVFLPWDEALAFATVLH------AHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLETSRFFVAD 221 (306)
T ss_dssp HHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEecCCCCccHHHHHH------HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhhhcccH
Confidence 889999999999954 5667 542 1111111 2233334444443 57899999999999998864 5556
Q ss_pred HHHhhhhhccccCCCChHHHHHhcCCCchHHHH--------HHHHHHhCCchHHHHHHHHh
Q psy316 287 LVHKDLLRMDHAAQAHPAVIKDQICSPGGSTIA--------GIHALEKAGVRTPFSSAARR 339 (341)
Q Consensus 287 l~~~~~~~~~~~~~~~p~~l~~~v~tpgG~t~~--------~l~~l~~~~~~~~~~~a~~~ 339 (341)
++.. ....+.+..++|+|++.. .++..++.|+...+.+++..
T Consensus 222 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~ 271 (306)
T 3l6d_A 222 ALEE-----------AVRRLETQDFKGDQARLDVHADAFAHIAQSLHAQGVWTPVFDAVCQ 271 (306)
T ss_dssp HHHH-----------HHHHHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHH-----------HHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCCchHHHHHHH
Confidence 6644 234566667788765432 34566667776666555543
No 22
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.86 E-value=1.6e-21 Score=179.44 Aligned_cols=200 Identities=14% Similarity=0.145 Sum_probs=155.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCe-EEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQ-IIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~-V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
.|||+|||+|+||+.++..|.++|+ + |++|+|++++++.+.+++|+ ...+..++++++|+||+|||++.+.+++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~----~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~ 85 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGF----RIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAELL 85 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTC----CEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCC----eEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHHH
Confidence 3689999999999999999999985 6 89999999999888776677 6677888888999999999999999999
Q ss_pred HHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCch-----hhhcCceEEEEeCCCCCccHHH
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTA-----MKYGKGITGMCHDVHLDKESEH 216 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p-----~~v~~g~~~l~~~~~~~~~~~~ 216 (341)
.++ .+.+ +++++||++++|++.+.+++.++ . .. + .+|..| .....+..++..+ .++ +.
T Consensus 86 ~~l-~~~~--~~~~ivv~~s~~~~~~~l~~~~~------~-~~-~--~~~~~~~~g~~~~~~~~~~~~v~~--~~~--~~ 148 (266)
T 3d1l_A 86 QGI-VEGK--REEALMVHTAGSIPMNVWEGHVP------H-YG-V--FYPMQTFSKQREVDFKEIPFFIEA--SST--ED 148 (266)
T ss_dssp HHH-HTTC--CTTCEEEECCTTSCGGGSTTTCS------S-EE-E--EEECCCC---CCCCCTTCCEEEEE--SSH--HH
T ss_pred HHH-Hhhc--CCCcEEEECCCCCchHHHHHHHH------h-cc-C--cCCceecCCCchhhcCCCeEEEec--CCH--HH
Confidence 998 8878 78999999999999877665554 1 11 1 111111 1111222233322 234 78
Q ss_pred HHHHHHHHHhcCC-eEEcCCCc---hhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q psy316 217 LNMAIKIMEQGGI-VEIIPESM---MNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQLLKGSGQL 287 (341)
Q Consensus 217 ~~~v~~ll~~lG~-~~~v~e~~---~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~~~gs~~l 287 (341)
.+.++++|+.+|. ++++++.. ++.+++++++++++++.+.+++. .+.|++++.+.+++.+++.++.++
T Consensus 149 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~---~~~Gl~~~~~~~l~~~~~~~~~~~ 220 (266)
T 3d1l_A 149 AAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAELL---KKYNLPFDVMLPLIDETARKVHEL 220 (266)
T ss_dssp HHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHTTCCGGGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHcCCCHHHHHHHHHHHHHHHHhc
Confidence 8999999999995 55676553 78899999999988888888864 489999999999999999887654
No 23
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.86 E-value=4.2e-21 Score=178.93 Aligned_cols=238 Identities=13% Similarity=0.186 Sum_probs=174.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeCh-HHHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKP-QYLDSAIQ 142 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~-~~v~~vl~ 142 (341)
|||+|||+|+||+.+++.|.+.|+ +|++|+ ++++++.+.+. |+ ...++.+++.++|+||+|||. .++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~~-~~~~~~~~~~~-g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~ 77 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH----QLHVTT-IGPVADELLSL-GAVNVETARQVTEFADIIFIMVPDTPQVEDVLF 77 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC----EEEECC-SSCCCHHHHTT-TCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC----EEEEEc-CHHHHHHHHHc-CCcccCCHHHHHhcCCEEEEECCCHHHHHHHHh
Confidence 699999999999999999999984 999999 98888888764 77 677888889999999999965 56889987
Q ss_pred ---HhhhcccccCCCcEEEEecCCCC--HHHHHHhccccCCCCCCCCeEEEEc--CCc--hhhhcCce-EEEEeCCCCCc
Q psy316 143 ---GLVNDKVTLNSSRCIISMLVGVD--LETLKKKLSVLVPNPNDAPTIIRVM--PNT--AMKYGKGI-TGMCHDVHLDK 212 (341)
Q Consensus 143 ---~i~~~~l~~~~~~iIVs~~agi~--~~~l~~~l~~~~~~~~~~~~vvr~m--pn~--p~~v~~g~-~~l~~~~~~~~ 212 (341)
++ .+.+ +++++||+++++.+ .+.+.+.++ . .. ++++ |.. +.....|. ++++.+ ++
T Consensus 78 ~~~~l-~~~l--~~~~~vv~~s~~~~~~~~~l~~~~~------~-~g--~~~~~~p~~~~~~~a~~g~~~~~~~~---~~ 142 (295)
T 1yb4_A 78 GEHGC-AKTS--LQGKTIVDMSSISPIETKRFAQRVN------E-MG--ADYLDAPVSGGEIGAREGTLSIMVGG---EQ 142 (295)
T ss_dssp STTSS-TTSC--CTTEEEEECSCCCHHHHHHHHHHHH------T-TT--EEEEECCEESHHHHHHHTCEEEEEES---CH
T ss_pred CchhH-hhcC--CCCCEEEECCCCCHHHHHHHHHHHH------H-cC--CeEEEccCCCCHHHHHcCCeEEEECC---CH
Confidence 77 7777 78999999887743 355666665 1 11 2322 211 11122344 444444 35
Q ss_pred cHHHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHH
Q psy316 213 ESEHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLLKGSGQLV 288 (341)
Q Consensus 213 ~~~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~~gs~~l~ 288 (341)
+..+.++++|+.+|..+ ++++........+.. +.+.+.++..+.|+ +.+.|++.+++.+++..+..++.. +
T Consensus 143 --~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~--n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~~~s~~-~ 217 (295)
T 1yb4_A 143 --KVFDRVKPLFDILGKNITLVGGNGDGQTCKVAN--QIIVALNIEAVSEALVFASKAGADPVRVRQALMGGFASSRI-L 217 (295)
T ss_dssp --HHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSSSCBHH-H
T ss_pred --HHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHH-H
Confidence 78899999999999864 456655555555443 34556666667776 779999999999888877655433 3
Q ss_pred HhhhhhccccCCCChHHHHHhcCCCchHHHH-------HHHHHHhCCchHHHHHHHHh
Q psy316 289 HKDLLRMDHAAQAHPAVIKDQICSPGGSTIA-------GIHALEKAGVRTPFSSAARR 339 (341)
Q Consensus 289 ~~~~~~~~~~~~~~p~~l~~~v~tpgG~t~~-------~l~~l~~~~~~~~~~~a~~~ 339 (341)
.. ++..+.++.++||++|+. +++.+++.|+...+.+++.+
T Consensus 218 ~~-----------~~~~~~~~~~~~g~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~ 264 (295)
T 1yb4_A 218 EV-----------HGERMINRTFEPGFKIALHQKDLNLALQSAKALALNLPNTATCQE 264 (295)
T ss_dssp HH-----------HHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HH-----------hhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 22 456677788899999988 78888999988888877654
No 24
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.85 E-value=3.1e-21 Score=179.12 Aligned_cols=238 Identities=18% Similarity=0.147 Sum_probs=171.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSAIQ 142 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~vl~ 142 (341)
|||+|||+|+||..+++.|.+ |+ +|++|+|++++++.+.+. |+ ... +.+++.++|+||+|||+. +++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~----~V~~~~~~~~~~~~~~~~-g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~~ 74 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF----PTLVWNRTFEKALRHQEE-FGSEAV-PLERVAEARVIFTCLPTTREVYEVAE 74 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS----CEEEECSSTHHHHHHHHH-HCCEEC-CGGGGGGCSEEEECCSSHHHHHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC----eEEEEeCCHHHHHHHHHC-CCcccC-HHHHHhCCCEEEEeCCChHHHHHHHH
Confidence 689999999999999999999 85 899999999998887763 66 444 677788999999999965 5899998
Q ss_pred HhhhcccccCCCcEEEEecCCCC--HHHHHHhccccCCCCCCCCeEEEEcCCc--hhhhcCce-EEEEeCCCCCccHHHH
Q psy316 143 GLVNDKVTLNSSRCIISMLVGVD--LETLKKKLSVLVPNPNDAPTIIRVMPNT--AMKYGKGI-TGMCHDVHLDKESEHL 217 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~~agi~--~~~l~~~l~~~~~~~~~~~~vvr~mpn~--p~~v~~g~-~~l~~~~~~~~~~~~~ 217 (341)
++ .+.+ +++++||+++++.. .+.+.+.++. .+.. +++. |.. +...+.|. ++++.+ ++ +..
T Consensus 75 ~l-~~~l--~~~~~vv~~s~~~~~~~~~l~~~~~~-----~g~~-~~~~-p~~~~~~~~~~g~~~~~~~~---~~--~~~ 139 (289)
T 2cvz_A 75 AL-YPYL--REGTYWVDATSGEPEASRRLAERLRE-----KGVT-YLDA-PVSGGTSGAEAGTLTVMLGG---PE--EAV 139 (289)
T ss_dssp HH-TTTC--CTTEEEEECSCCCHHHHHHHHHHHHT-----TTEE-EEEC-CEESHHHHHHHTCEEEEEES---CH--HHH
T ss_pred HH-HhhC--CCCCEEEECCCCCHHHHHHHHHHHHH-----cCCE-EEEe-cCCCChhHHhhCCeEEEECC---CH--HHH
Confidence 88 8888 78899998765432 3456666652 1234 5554 532 33344454 344443 34 788
Q ss_pred HHHHHHHHhcCCe-EEcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhhhh
Q psy316 218 NMAIKIMEQGGIV-EIIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLLKGSGQLVHKDLL 293 (341)
Q Consensus 218 ~~v~~ll~~lG~~-~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~~gs~~l~~~~~~ 293 (341)
+.++++| .+|.. +++++... ...+..+.+++.+.+...+.|+ +.+.|++++++.+++.++..++ .++..
T Consensus 140 ~~~~~ll-~~g~~~~~~~~~~~--~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s-~~~~~--- 212 (289)
T 2cvz_A 140 ERVRPFL-AYAKKVVHVGPVGA--GHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRS-NATEN--- 212 (289)
T ss_dssp HHHGGGC-TTEEEEEEEESTTH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCB-HHHHH---
T ss_pred HHHHHHH-hhcCCeEEcCCCcH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCCC-HHHHH---
Confidence 8999999 99985 45665433 3333445678888888888887 7799999999999888776655 44433
Q ss_pred hccccCCCCh-HHHHHhcCCCchHHHH-------HHHHHHhCCchHHHHHHHHh
Q psy316 294 RMDHAAQAHP-AVIKDQICSPGGSTIA-------GIHALEKAGVRTPFSSAARR 339 (341)
Q Consensus 294 ~~~~~~~~~p-~~l~~~v~tpgG~t~~-------~l~~l~~~~~~~~~~~a~~~ 339 (341)
..| ..+.+.+ +||++++. .++..++.|+...+.+++.+
T Consensus 213 -------~~~~~~l~~~~-~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~ 258 (289)
T 2cvz_A 213 -------LIPQRVLTRAF-PKTFALGLLVKDLGIAMGVLDGEKAPSPLLRLARE 258 (289)
T ss_dssp -------THHHHTTTSCC-CCSSBHHHHHHHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred -------hccchhhcCCC-CCCcChHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 234 4555555 78877763 55677778888888777654
No 25
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.85 E-value=1e-20 Score=176.90 Aligned_cols=242 Identities=16% Similarity=0.188 Sum_probs=167.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeC-hHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMK-PQYLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~-~~~v~~vl 141 (341)
+|||+|||+|+||..+++.|.+.|+ +|++|+|++++++.+.++ |+ ...++.+++.++|+||+||| +.+++.++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~----~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~ 78 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGV----TVYAFDLMEANVAAVVAQ-GAQACENNQKVAAASDIIFTSLPNAGIVETVM 78 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTC----EEEEECSSHHHHHHHHTT-TCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHHC-CCeecCCHHHHHhCCCEEEEECCCHHHHHHHH
Confidence 4789999999999999999999984 899999999999888774 77 67788888999999999996 67889998
Q ss_pred H---HhhhcccccCCCcEEEEecCCC--CHHHHHHhccccCCCCCCCCeEEEEcCCchh--hhcCce-EEEEeCCCCCcc
Q psy316 142 Q---GLVNDKVTLNSSRCIISMLVGV--DLETLKKKLSVLVPNPNDAPTIIRVMPNTAM--KYGKGI-TGMCHDVHLDKE 213 (341)
Q Consensus 142 ~---~i~~~~l~~~~~~iIVs~~agi--~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~--~v~~g~-~~l~~~~~~~~~ 213 (341)
. ++ .+.+ +++++||+++++. +.+.+.+.++. .+.. ++. .|..+. ....|. ++++.+ ++
T Consensus 79 ~~~~~l-~~~l--~~~~~vv~~~~~~~~~~~~l~~~~~~-----~g~~-~~~-~p~~~~~~~a~~g~~~~~~~g---~~- 144 (301)
T 3cky_A 79 NGPGGV-LSAC--KAGTVIVDMSSVSPSSTLKMAKVAAE-----KGID-YVD-APVSGGTKGAEAGTLTIMVGA---SE- 144 (301)
T ss_dssp HSTTCH-HHHS--CTTCEEEECCCCCHHHHHHHHHHHHH-----TTCE-EEE-CCEESHHHHHHHTCEEEEEES---CH-
T ss_pred cCcchH-hhcC--CCCCEEEECCCCCHHHHHHHHHHHHH-----cCCe-EEE-ccCCCCHHHHHcCCeEEEECC---CH-
Confidence 5 77 7778 7899999998887 34667666652 1223 332 232111 122353 555554 35
Q ss_pred HHHHHHHHHHHHhcCCeEE-cCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHH
Q psy316 214 SEHLNMAIKIMEQGGIVEI-IPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLLKGSGQLVH 289 (341)
Q Consensus 214 ~~~~~~v~~ll~~lG~~~~-v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~~gs~~l~~ 289 (341)
+..+.++++|+.+|..++ +++.....+..+.. +.+.+.+...+.|+ +.+.|++++++.+++.++..++..+..
T Consensus 145 -~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~--N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~~~ 221 (301)
T 3cky_A 145 -AVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVN--NLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEA 221 (301)
T ss_dssp -HHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHH
T ss_pred -HHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHH
Confidence 788999999999998754 55544444444432 23444444445554 678999999999999888766655543
Q ss_pred hhhhhccccCCCCh-HHHHHhcCCCchHHHH-------HHHHHHhCCchHHHHHHHHh
Q psy316 290 KDLLRMDHAAQAHP-AVIKDQICSPGGSTIA-------GIHALEKAGVRTPFSSAARR 339 (341)
Q Consensus 290 ~~~~~~~~~~~~~p-~~l~~~v~tpgG~t~~-------~l~~l~~~~~~~~~~~a~~~ 339 (341)
. .| ..+.+.+ +||+.+.. .++..++.|+...+.+++.+
T Consensus 222 ~-----------~~~~~l~~~~-~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~ 267 (301)
T 3cky_A 222 K-----------MEKFIMSGDF-AGGFAMDLQHKDLGLALEAGKEGNVPLPMTAMATQ 267 (301)
T ss_dssp H-----------CCCCCCTCCC-SSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred h-----------hhhhhhcCCC-CCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 3 22 2333333 56666653 34566667777666666543
No 26
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.84 E-value=9.5e-20 Score=172.11 Aligned_cols=241 Identities=15% Similarity=0.102 Sum_probs=162.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCC--hhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPS--ERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~--~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~v 140 (341)
+|||+|||+|+||.+|+++|.++|+ .+|++|||+ +++.+.+.+ .|+ ...++.++++++|+||+|||++...++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~---~~V~~~dr~~~~~~~~~~~~-~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~ 99 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGA---IDMAAYDAASAESWRPRAEE-LGVSCKASVAEVAGECDVIFSLVTAQAALEV 99 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSC---CEEEEECSSCHHHHHHHHHH-TTCEECSCHHHHHHHCSEEEECSCTTTHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC---CeEEEEcCCCCHHHHHHHHH-CCCEEeCCHHHHHhcCCEEEEecCchhHHHH
Confidence 4799999999999999999999983 389999997 577777766 588 778889999999999999999888888
Q ss_pred HHHhhhcccccCCCcEEEEecCCCCHHH---HHHhccccCCCCCCCCeEEE--EcCCchhhhcCceEEEEeCCCCCccHH
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVGVDLET---LKKKLSVLVPNPNDAPTIIR--VMPNTAMKYGKGITGMCHDVHLDKESE 215 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~agi~~~~---l~~~l~~~~~~~~~~~~vvr--~mpn~p~~v~~g~~~l~~~~~~~~~~~ 215 (341)
+.++ .+.+ +++++||+++ ++.... +.+.+.... .+.. ++. ++.+.+.. ....+++++++. +
T Consensus 100 ~~~l-~~~l--~~~~ivvd~s-t~~~~~~~~~~~~~~~~~---~g~~-~vd~pv~g~~~~~-~g~l~i~vgg~~-----~ 165 (312)
T 3qsg_A 100 AQQA-GPHL--CEGALYADFT-SCSPAVKRAIGDVISRHR---PSAQ-YAAVAVMSAVKPH-GHRVPLVVDGDG-----A 165 (312)
T ss_dssp HHHH-GGGC--CTTCEEEECC-CCCHHHHHHHHHHHHHHC---TTCE-EEEEEECSCSTTT-GGGSEEEEESTT-----H
T ss_pred HHhh-Hhhc--CCCCEEEEcC-CCCHHHHHHHHHHHHhhc---CCCe-EEeccccCCchhh-cCCEEEEecCCh-----H
Confidence 9998 8888 8899999875 445432 233332100 0233 332 23333333 334667777652 4
Q ss_pred HHHHHHHHHHhcCCeEE-cCCCchhHHHHHhcchHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHHHHHHHHhh
Q psy316 216 HLNMAIKIMEQGGIVEI-IPESMMNSFGAIAGSGCAYLFLVMDAMAD---GAVKQGIPRDMALRIGAQLLKGSGQLVHKD 291 (341)
Q Consensus 216 ~~~~v~~ll~~lG~~~~-v~e~~~d~~~al~g~gpa~~~~~~eal~e---a~~~~Gl~~~~a~~lv~~~~~gs~~l~~~~ 291 (341)
+.++++|+.+|..++ +++ ......++..+.++|++..+..+.| .+.+.|+++ +..+.+..+. ++ ..+..
T Consensus 166 --~~~~~ll~~~g~~~~~~g~-~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~-~~~~~l~~~~-~~-~~~~~- 238 (312)
T 3qsg_A 166 --RRFQAAFTLYGCRIEVLDG-EVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLAD-RVLASLDASF-PE-HHLRD- 238 (312)
T ss_dssp --HHHHHHHHTTTCEEEECCS-STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH-HHHHHHHHHS-GG-GTHHH-
T ss_pred --HHHHHHHHHhCCCeEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHHHHHhcC-Cc-hhHHH-
Confidence 789999999998765 454 3556666666778888666656555 467899998 4666666554 22 11222
Q ss_pred hhhccccCCCChHHHHHhcCCCchHH----HHHHHHHHhCCchHHHHHHHHh
Q psy316 292 LLRMDHAAQAHPAVIKDQICSPGGST----IAGIHALEKAGVRTPFSSAARR 339 (341)
Q Consensus 292 ~~~~~~~~~~~p~~l~~~v~tpgG~t----~~~l~~l~~~~~~~~~~~a~~~ 339 (341)
....+.+..++||+.. ...++..++.|+...+.+++..
T Consensus 239 ----------~~~~~~~~~~~~g~~~~KDl~~~~~~a~~~g~~~pl~~~~~~ 280 (312)
T 3qsg_A 239 ----------LALYLVERNLEHADRRAHELGEVAATLCSVGVEPLVAEAGYR 280 (312)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred ----------hhhHhhcCCCCcccchHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 2334455555676663 3344455667777666665543
No 27
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.84 E-value=5.4e-20 Score=172.26 Aligned_cols=190 Identities=16% Similarity=0.184 Sum_probs=143.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cc------------cChHHHhh---cCC
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-AL------------NDNHRIIK---EAE 126 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~------------~s~~e~~~---~aD 126 (341)
|+|||+|||+|+||++++..|.++|+ +|++|+|++++++.+.+. |+ .. .+..++.. ++|
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 76 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGN----DVTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNEQVD 76 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSCCCS
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCC----cEEEEECCHHHHHHHHhC-CEEEEeCCCeeEecceeecchhhcccCCCCC
Confidence 45799999999999999999999984 999999999988877653 43 11 13344444 899
Q ss_pred EEEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCCCH-HHHHHhccccCCCCCCCCeEE---------EEcCCchhh
Q psy316 127 YVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL-ETLKKKLSVLVPNPNDAPTII---------RVMPNTAMK 196 (341)
Q Consensus 127 vIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~-~~l~~~l~~~~~~~~~~~~vv---------r~mpn~p~~ 196 (341)
+||+|||++.+.++++++ .+.+ +++++||++.+|++. +.+++.++. .+ ++ +.+|+.+..
T Consensus 77 ~vi~~v~~~~~~~v~~~l-~~~l--~~~~~iv~~~~g~~~~~~l~~~~~~-------~~-vi~g~~~~~~~~~~p~~~~~ 145 (316)
T 2ew2_A 77 LIIALTKAQQLDAMFKAI-QPMI--TEKTYVLCLLNGLGHEDVLEKYVPK-------EN-ILVGITMWTAGLEGPGRVKL 145 (316)
T ss_dssp EEEECSCHHHHHHHHHHH-GGGC--CTTCEEEECCSSSCTHHHHTTTSCG-------GG-EEEEEECCCCEEEETTEEEE
T ss_pred EEEEEeccccHHHHHHHH-HHhc--CCCCEEEEecCCCCcHHHHHHHcCC-------cc-EEEEEeeeeeEEcCCCEEEE
Confidence 999999999999999999 9988 889999999999886 667666652 12 32 567877766
Q ss_pred hcCceEEEEeCCCCCccHHHHHHHHHHHHhcCCeEEcCCCc-------------hhHHHHHhcchHHHHH-------HHH
Q psy316 197 YGKGITGMCHDVHLDKESEHLNMAIKIMEQGGIVEIIPESM-------------MNSFGAIAGSGCAYLF-------LVM 256 (341)
Q Consensus 197 v~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~~-------------~d~~~al~g~gpa~~~-------~~~ 256 (341)
.+.|...+......++ +..+.+.++|+.+|..+++.++. ++.++++.+++|++++ .+.
T Consensus 146 ~~~g~~~i~~~~~~~~--~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~ 223 (316)
T 2ew2_A 146 LGDGEIELENIDPSGK--KFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVK 223 (316)
T ss_dssp CSCCCEEEEESSGGGH--HHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHH
T ss_pred ecCCcEEEeecCCCcc--HHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHH
Confidence 7777666654333344 77889999999999887765553 6788999999888753 233
Q ss_pred HHHHHH---HHHcCCCH
Q psy316 257 DAMADG---AVKQGIPR 270 (341)
Q Consensus 257 eal~ea---~~~~Gl~~ 270 (341)
..+.|. +.+.|++.
T Consensus 224 ~~~~E~~~la~~~G~~~ 240 (316)
T 2ew2_A 224 TLISEFAAVAEKEAIYL 240 (316)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 344443 45789886
No 28
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.83 E-value=1.8e-19 Score=169.30 Aligned_cols=197 Identities=14% Similarity=0.168 Sum_probs=140.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-c-ccChHHHhhcCCEEEEeeCh-HHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-A-LNDNHRIIKEAEYVFLAMKP-QYLDS 139 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~-~~s~~e~~~~aDvIilaV~~-~~v~~ 139 (341)
|+|||+|||+|+||++|+++|.++|+ +|++|||++++++.+.+ .|. . ..++.++++++|+||+|||+ ..++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~----~V~~~dr~~~~~~~~~~-~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~ 80 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGL----STWGADLNPQACANLLA-EGACGAAASAREFAGVVDALVILVVNAAQVRQ 80 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHH-TTCSEEESSSTTTTTTCSEEEECCSSHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC----eEEEEECCHHHHHHHHH-cCCccccCCHHHHHhcCCEEEEECCCHHHHHH
Confidence 56899999999999999999999995 99999999999998887 477 5 78889999999999999996 57888
Q ss_pred HH---HHhhhcccccCCCcEEEEecCCCCHH---HHHHhccccCCCCCCCCeEEEEcC--CchhhhcCce-EEEEeCCCC
Q psy316 140 AI---QGLVNDKVTLNSSRCIISMLVGVDLE---TLKKKLSVLVPNPNDAPTIIRVMP--NTAMKYGKGI-TGMCHDVHL 210 (341)
Q Consensus 140 vl---~~i~~~~l~~~~~~iIVs~~agi~~~---~l~~~l~~~~~~~~~~~~vvr~mp--n~p~~v~~g~-~~l~~~~~~ 210 (341)
++ +++ .+.+ +++++||++++ +++. .+.+.+.. .+.. ++. .| ..+.....|. ++++.++
T Consensus 81 v~~~~~~l-~~~l--~~g~ivv~~st-~~~~~~~~~~~~~~~-----~g~~-~~~-~pv~g~~~~a~~g~l~~~~gg~-- 147 (303)
T 3g0o_A 81 VLFGEDGV-AHLM--KPGSAVMVSST-ISSADAQEIAAALTA-----LNLN-MLD-APVSGGAVKAAQGEMTVMASGS-- 147 (303)
T ss_dssp HHC--CCC-GGGS--CTTCEEEECSC-CCHHHHHHHHHHHHT-----TTCE-EEE-CCEESCHHHHHTTCEEEEEECC--
T ss_pred HHhChhhH-HhhC--CCCCEEEecCC-CCHHHHHHHHHHHHH-----cCCe-EEe-CCCCCChhhhhcCCeEEEeCCC--
Confidence 88 778 7888 88999998754 4543 34444441 2233 333 33 2333344554 4555543
Q ss_pred CccHHHHHHHHHHHHhcCCeE-EcCC-CchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHH
Q psy316 211 DKESEHLNMAIKIMEQGGIVE-IIPE-SMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLLK 282 (341)
Q Consensus 211 ~~~~~~~~~v~~ll~~lG~~~-~v~e-~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~~ 282 (341)
+ +.++.++++|+.+|..+ ++++ ........+.. +.+.+..+..+.|+ +.+.|+++++..+++..+..
T Consensus 148 -~--~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~--N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~ 219 (303)
T 3g0o_A 148 -E--AAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIH--QLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAG 219 (303)
T ss_dssp -H--HHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTT
T ss_pred -H--HHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccc
Confidence 4 88999999999999864 5654 33334444432 33444444444443 57899999999998877543
No 29
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.83 E-value=1.1e-19 Score=166.83 Aligned_cols=231 Identities=15% Similarity=0.161 Sum_probs=160.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcC--ChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAP--SERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r--~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
|||+|||+|+||++|+++|.++|+ +|++|+| ++++++.+.+ .|+. .++.+++.++|+||+|||++...+.+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~----~V~~~~~~~~~~~~~~~~~-~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~~ 74 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGV----EVVTSLEGRSPSTIERART-VGVT-ETSEEDVYSCPVVISAVTPGVALGAAR 74 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC----EEEECCTTCCHHHHHHHHH-HTCE-ECCHHHHHTSSEEEECSCGGGHHHHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCC----eEEEeCCccCHHHHHHHHH-CCCc-CCHHHHHhcCCEEEEECCCHHHHHHHH
Confidence 589999999999999999999985 8999999 7777777665 3555 677888899999999999976555567
Q ss_pred HhhhcccccCCCcEEEEecCCCCH---HHHHHhccccCCCCCCCCeEEEEcCCchhhhcCceEEEEeCCCCCccHHHHHH
Q psy316 143 GLVNDKVTLNSSRCIISMLVGVDL---ETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGITGMCHDVHLDKESEHLNM 219 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~~agi~~---~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l~~~~~~~~~~~~~~~ 219 (341)
++ .+.+ ++ +||++ ++++. +.+.+.++. .+ . +-..+-..|...+.|..+++.++ . . +.
T Consensus 75 ~~-~~~~--~~--~vi~~-s~~~~~~~~~l~~~~~~-----~g-~-~~~~v~~~~~~~~~g~~~~~~g~---~--~--~~ 134 (264)
T 1i36_A 75 RA-GRHV--RG--IYVDI-NNISPETVRMASSLIEK-----GG-F-VDAAIMGSVRRKGADIRIIASGR---D--A--EE 134 (264)
T ss_dssp HH-HTTC--CS--EEEEC-SCCCHHHHHHHHHHCSS-----SE-E-EEEEECSCHHHHGGGCEEEEEST---T--H--HH
T ss_pred HH-HHhc--Cc--EEEEc-cCCCHHHHHHHHHHHhh-----CC-e-eeeeeeCCccccccCCeEEecCC---c--H--HH
Confidence 77 7777 54 88887 55654 356666662 11 1 21112234555556666555553 2 3 67
Q ss_pred HHHHHHhcCCe-EEcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy316 220 AIKIMEQGGIV-EIIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLLKGSGQLVHKDLLRM 295 (341)
Q Consensus 220 v~~ll~~lG~~-~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~~gs~~l~~~~~~~~ 295 (341)
+++ |+.+|.. ++++++ .....++..+.++|++.++..+.|+ +.+.|++++ +.+++.+++ |+..+. .
T Consensus 135 ~~~-l~~~g~~~~~~~~~-~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~~~-g~~~~~-~----- 204 (264)
T 1i36_A 135 FMK-LNRYGLNIEVRGRE-PGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEYTE-GNDFRE-S----- 204 (264)
T ss_dssp HHG-GGGGTCEEEECSSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTS-CSSTHH-H-----
T ss_pred hhh-HHHcCCeeEECCCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHhc-CccHHH-H-----
Confidence 888 9999986 466754 4555555556678877777777777 789999987 777776654 322221 1
Q ss_pred cccCCCChHHHHHhcCCCchHHHHHH----HHHHhCCchHHHHHHHHh
Q psy316 296 DHAAQAHPAVIKDQICSPGGSTIAGI----HALEKAGVRTPFSSAARR 339 (341)
Q Consensus 296 ~~~~~~~p~~l~~~v~tpgG~t~~~l----~~l~~~~~~~~~~~a~~~ 339 (341)
.+ .+.++.++||+++.+.+ +.+++. +...+.+++.+
T Consensus 205 ------~~-~~~~~~~~~g~~~~~~~~~~~~~a~~~-v~~p~~~~v~~ 244 (264)
T 1i36_A 205 ------AI-SRLKSSCIHARRRYEEMKEVQDMLAEV-IDPVMPTCIIR 244 (264)
T ss_dssp ------HH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-SCCSHHHHHHH
T ss_pred ------HH-HHhcCCCCcchhhHHHHHHHHHHHHHh-cCchHHHHHHH
Confidence 23 35567788998888887 666667 77666666544
No 30
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.83 E-value=1.5e-19 Score=168.36 Aligned_cols=238 Identities=13% Similarity=0.117 Sum_probs=161.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeCh-HHHHHHH-
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKP-QYLDSAI- 141 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~-~~v~~vl- 141 (341)
|||+|||+|+||.+++++|.++|+ +|++|||++++++.+.+ .|+ ...++.++++++|+||+|||+ .++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~----~V~~~dr~~~~~~~~~~-~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~ 76 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF----DVTVWNRNPAKCAPLVA-LGARQASSPAEVCAACDITIAMLADPAAAREVCF 76 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC----CEEEECSSGGGGHHHHH-HTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC----eEEEEcCCHHHHHHHHH-CCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHc
Confidence 689999999999999999999995 99999999999998877 477 778899999999999999996 4899999
Q ss_pred --HHhhhcccccCCCcEEEEecCCCCHH---HHHHhccccCCCCCCCCeEEEEcC--CchhhhcCce-EEEEeCCCCCcc
Q psy316 142 --QGLVNDKVTLNSSRCIISMLVGVDLE---TLKKKLSVLVPNPNDAPTIIRVMP--NTAMKYGKGI-TGMCHDVHLDKE 213 (341)
Q Consensus 142 --~~i~~~~l~~~~~~iIVs~~agi~~~---~l~~~l~~~~~~~~~~~~vvr~mp--n~p~~v~~g~-~~l~~~~~~~~~ 213 (341)
+++ .+.+ +++++||++++ +++. .+.+.+.. .+.. ++.. | ..|.....|. ++++.++ +
T Consensus 77 ~~~~l-~~~l--~~g~~vv~~st-~~~~~~~~~~~~~~~-----~g~~-~~~~-pv~g~~~~a~~g~l~~~~gg~---~- 141 (287)
T 3pdu_A 77 GANGV-LEGI--GGGRGYIDMST-VDDETSTAIGAAVTA-----RGGR-FLEA-PVSGTKKPAEDGTLIILAAGD---Q- 141 (287)
T ss_dssp STTCG-GGTC--CTTCEEEECSC-CCHHHHHHHHHHHHH-----TTCE-EEEC-CEECCHHHHHHTCEEEEEEEC---H-
T ss_pred Cchhh-hhcc--cCCCEEEECCC-CCHHHHHHHHHHHHH-----cCCE-EEEC-CccCCHHHHhcCCEEEEEeCC---H-
Confidence 778 7778 78999998855 4443 33344431 2223 3332 2 2233334454 4555553 4
Q ss_pred HHHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHH
Q psy316 214 SEHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLLKGSGQLVH 289 (341)
Q Consensus 214 ~~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~~gs~~l~~ 289 (341)
+.++.++++|+.+|..+ ++++........+. .+.+++..+..+.|+ +.+.|+++++..+++..+..++ .++.
T Consensus 142 -~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~--~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s-~~~~ 217 (287)
T 3pdu_A 142 -SLFTDAGPAFAALGKKCLHLGEVGQGARMKLV--VNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMAN-PMFK 217 (287)
T ss_dssp -HHHHHTHHHHHHHEEEEEECSSTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCC-HHHH
T ss_pred -HHHHHHHHHHHHhCCCEEEcCCCChHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccccC-hHHH
Confidence 88899999999999864 56654434444443 245555555555554 5689999999999988764333 2332
Q ss_pred hhhhhccccCCCChHHHHHhcCCCchHHHHHHHHH-------HhCCchHHHHHHH
Q psy316 290 KDLLRMDHAAQAHPAVIKDQICSPGGSTIAGIHAL-------EKAGVRTPFSSAA 337 (341)
Q Consensus 290 ~~~~~~~~~~~~~p~~l~~~v~tpgG~t~~~l~~l-------~~~~~~~~~~~a~ 337 (341)
. ....+.+....|++....+.+.+ ++.|+..-+.+++
T Consensus 218 ~-----------~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~ 261 (287)
T 3pdu_A 218 G-----------KGQMLLSGEFPTSFPLKHMQKDLRLAVELGDRLGQPLHGAATA 261 (287)
T ss_dssp H-----------HHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHH
T ss_pred h-----------hccccccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHH
Confidence 2 12234444456776665544443 4455554444444
No 31
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.82 E-value=1.1e-18 Score=164.66 Aligned_cols=195 Identities=18% Similarity=0.226 Sum_probs=140.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeC-hHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMK-PQYLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~-~~~v~~vl 141 (341)
+|||+|||+|+||.+|+++|.++|+ +|++|||++++++.+.+ .|+ ...++.++++++|+||+||| +.++++++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~----~V~~~dr~~~~~~~l~~-~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGF----KVTVWNRTLSKCDELVE-HGASVCESPAEVIKKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSGGGGHHHHH-TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHH-CCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence 3799999999999999999999995 99999999999998886 588 77889999999999999998 46899999
Q ss_pred ---HHhhhcccccCCCcEEEEecCCCCHHH---HHHhccccCCCCCCCCeEEEEcC--CchhhhcCce-EEEEeCCCCCc
Q psy316 142 ---QGLVNDKVTLNSSRCIISMLVGVDLET---LKKKLSVLVPNPNDAPTIIRVMP--NTAMKYGKGI-TGMCHDVHLDK 212 (341)
Q Consensus 142 ---~~i~~~~l~~~~~~iIVs~~agi~~~~---l~~~l~~~~~~~~~~~~vvr~mp--n~p~~v~~g~-~~l~~~~~~~~ 212 (341)
.++ .+.+ .++++||+++ ++++.. +.+.+.. .+.. ++. .| ..+.....|. ++++.++ +
T Consensus 96 ~~~~~l-~~~l--~~g~~vv~~s-t~~~~~~~~~~~~~~~-----~g~~-~v~-~pv~g~~~~a~~g~l~i~~gg~---~ 161 (310)
T 3doj_A 96 FDKGGV-LEQI--CEGKGYIDMS-TVDAETSLKINEAITG-----KGGR-FVE-GPVSGSKKPAEDGQLIILAAGD---K 161 (310)
T ss_dssp HSTTCG-GGGC--CTTCEEEECS-CCCHHHHHHHHHHHHH-----TTCE-EEE-CCEECCHHHHHHTCEEEEEEEC---H
T ss_pred hCchhh-hhcc--CCCCEEEECC-CCCHHHHHHHHHHHHH-----cCCE-EEe-CCCCCChhHHhcCCeEEEEcCC---H
Confidence 777 7778 8899999875 455443 3334431 1222 332 22 2222223343 4555553 4
Q ss_pred cHHHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHH
Q psy316 213 ESEHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLL 281 (341)
Q Consensus 213 ~~~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~ 281 (341)
+.++.++++|+.+|..+ ++++........+.. +.+++..+..+.|+ +.+.|++.++..+++..+.
T Consensus 162 --~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~--N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~ 230 (310)
T 3doj_A 162 --ALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIV--NMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGA 230 (310)
T ss_dssp --HHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHST
T ss_pred --HHHHHHHHHHHHhCCCEEEeCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 88999999999999764 566544444444433 44554444455554 5689999999999887643
No 32
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.82 E-value=5.3e-19 Score=168.27 Aligned_cols=196 Identities=16% Similarity=0.143 Sum_probs=135.0
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC----------Cc-cccChHHHhhcCCEE
Q psy316 60 HVPMWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM----------DF-ALNDNHRIIKEAEYV 128 (341)
Q Consensus 60 ~~~m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~----------g~-~~~s~~e~~~~aDvI 128 (341)
|--|.|||+|||+|+||++|+.+|.++|+ +|++|+|++++++.++++. ++ .+.++.+ +..+|+|
T Consensus 10 ~~~~~~kI~iIG~G~mG~ala~~L~~~G~----~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvV 84 (335)
T 1z82_A 10 HHHMEMRFFVLGAGSWGTVFAQMLHENGE----EVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDIL 84 (335)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEE
T ss_pred ccccCCcEEEECcCHHHHHHHHHHHhCCC----eEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEE
Confidence 33588899999999999999999999994 9999999999888876531 24 4567777 8899999
Q ss_pred EEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCCCHH---HHHHhccccCCCCCCCCeEEEEcCCchhhhcCce-EEE
Q psy316 129 FLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLE---TLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGI-TGM 204 (341)
Q Consensus 129 ilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~---~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~-~~l 204 (341)
|+|||++++++++.++ .+ ++++||++++|++.+ .+.+.++...+ ... .++.+|+.+..++.|. +.+
T Consensus 85 il~vk~~~~~~v~~~l-~~-----~~~~vv~~~nGi~~~~~~~l~~~~~~~~~---~~~-~~~~~P~~~~~~~~g~~~~~ 154 (335)
T 1z82_A 85 VIAIPVQYIREHLLRL-PV-----KPSMVLNLSKGIEIKTGKRVSEIVEEILG---CPY-AVLSGPSHAEEVAKKLPTAV 154 (335)
T ss_dssp EECSCGGGHHHHHTTC-SS-----CCSEEEECCCCCCTTTCCCHHHHHHHHTC---CCE-EEEESSCCHHHHHTTCCEEE
T ss_pred EEECCHHHHHHHHHHh-Cc-----CCCEEEEEeCCCCCCccCcHHHHHHHHcC---Cce-EEEECCccHHHHhCCCceEE
Confidence 9999999999999887 43 578999999998753 34444332111 123 6789999998877775 444
Q ss_pred EeCCCCCccHHHHHHHHHHHHhcCCeEEcCCCchh---------H----HHHHhc--chH----HHHHHHHHHHHHHHHH
Q psy316 205 CHDVHLDKESEHLNMAIKIMEQGGIVEIIPESMMN---------S----FGAIAG--SGC----AYLFLVMDAMADGAVK 265 (341)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~~~d---------~----~~al~g--~gp----a~~~~~~eal~ea~~~ 265 (341)
+.+. . + .+.++++|+..|..+++.++... . ..++.+ .++ +++...+..+...+.+
T Consensus 155 ~~g~---~--~-~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a 228 (335)
T 1z82_A 155 TLAG---E--N-SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMF 228 (335)
T ss_dssp EEEE---T--T-HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe---h--h-HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 4432 2 3 67889999999988777655321 1 111111 122 2333334444445678
Q ss_pred cCCCHHHHHHH
Q psy316 266 QGIPRDMALRI 276 (341)
Q Consensus 266 ~Gl~~~~a~~l 276 (341)
.|++.+++.++
T Consensus 229 ~G~~~~~~~~l 239 (335)
T 1z82_A 229 FGADQKTFMGL 239 (335)
T ss_dssp TTCCHHHHTST
T ss_pred hCCChhhhccc
Confidence 99999877553
No 33
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.82 E-value=7.5e-20 Score=164.30 Aligned_cols=148 Identities=11% Similarity=0.133 Sum_probs=122.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEE-EcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIA-SAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v-~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
+|||+|||+|+||++++++|.++|+ +|++ |+|++++++.+.+++|+ ...+..+.+.++|+||+|||++.+.+++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~----~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~~~~~v~ 98 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQI----PAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYDSIADIV 98 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTC----CEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGGGHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----EEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChHHHHHHH
Confidence 4799999999999999999999985 8888 99999999988766676 5556677789999999999999999999
Q ss_pred HHhhhcccccCCCcEEEEecCCC--------------CHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcC-c------
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGV--------------DLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGK-G------ 200 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi--------------~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~-g------ 200 (341)
.++ .+ + ++++||++++|+ +.+.+++.++ +.+ +++.|||.+..+.. |
T Consensus 99 ~~l-~~-~---~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-------~~~-vv~~~~~~~~~v~~~g~~~~~~ 165 (220)
T 4huj_A 99 TQV-SD-W---GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-------GAK-VVKAFNTLPAAVLAADPDKGTG 165 (220)
T ss_dssp TTC-SC-C---TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-------TCE-EEEESCSSCHHHHTSCSBCSSC
T ss_pred HHh-hc-c---CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-------CCC-EEECCCCCCHHHhhhCcccCCC
Confidence 998 77 7 478999999998 4677888887 467 99999998877654 2
Q ss_pred -eEEEEeCCCCCccHHHHHHHHHHHHhcCCeEE
Q psy316 201 -ITGMCHDVHLDKESEHLNMAIKIMEQGGIVEI 232 (341)
Q Consensus 201 -~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~ 232 (341)
..+++.+. ++ +..+.++++|+.+|..++
T Consensus 166 ~~~v~~~g~--~~--~~~~~v~~l~~~~G~~~~ 194 (220)
T 4huj_A 166 SRVLFLSGN--HS--DANRQVAELISSLGFAPV 194 (220)
T ss_dssp EEEEEEEES--CH--HHHHHHHHHHHHTTCEEE
T ss_pred CeeEEEeCC--CH--HHHHHHHHHHHHhCCCeE
Confidence 34444443 25 889999999999998754
No 34
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.82 E-value=1e-18 Score=162.67 Aligned_cols=194 Identities=16% Similarity=0.205 Sum_probs=140.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeC-hHHHHHHH-
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMK-PQYLDSAI- 141 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~-~~~v~~vl- 141 (341)
|||+|||+|+||.+++++|.++|+ +|++|+|++++++.+.+ .|+ ...++.+++.++|+||+||| +.++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~----~V~~~dr~~~~~~~~~~-~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~ 76 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC----SVTIWNRSPEKAEELAA-LGAERAATPCEVVESCPVTFAMLADPAAAEEVCF 76 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSGGGGHHHHH-TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC----eEEEEcCCHHHHHHHHH-CCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHc
Confidence 689999999999999999999995 99999999999998887 488 77889999999999999999 68999999
Q ss_pred --HHhhhcccccCCCcEEEEecCCCCHHH---HHHhccccCCCCCCCCeEEEEcC--CchhhhcCce-EEEEeCCCCCcc
Q psy316 142 --QGLVNDKVTLNSSRCIISMLVGVDLET---LKKKLSVLVPNPNDAPTIIRVMP--NTAMKYGKGI-TGMCHDVHLDKE 213 (341)
Q Consensus 142 --~~i~~~~l~~~~~~iIVs~~agi~~~~---l~~~l~~~~~~~~~~~~vvr~mp--n~p~~v~~g~-~~l~~~~~~~~~ 213 (341)
.++ .+.+ +++++||++ +++++.. +.+.+.. .+.. ++. .| ..+.....|. ++++.++ +
T Consensus 77 ~~~~l-~~~l--~~~~~vi~~-st~~~~~~~~~~~~~~~-----~g~~-~~~-~pv~g~~~~a~~g~l~~~~gg~---~- 141 (287)
T 3pef_A 77 GKHGV-LEGI--GEGRGYVDM-STVDPATSQRIGVAVVA-----KGGR-FLE-APVSGSKKPAEDGTLIILAAGD---R- 141 (287)
T ss_dssp STTCH-HHHC--CTTCEEEEC-SCCCHHHHHHHHHHHHH-----TTCE-EEE-CCEECCHHHHHHTCEEEEEEEC---H-
T ss_pred CcchH-hhcC--CCCCEEEeC-CCCCHHHHHHHHHHHHH-----hCCE-EEE-CCCcCCHHHHhcCCEEEEEeCC---H-
Confidence 788 7788 889999988 4555543 3333331 1222 332 23 1222223343 4555553 4
Q ss_pred HHHHHHHHHHHHhcCCe-EEcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHH
Q psy316 214 SEHLNMAIKIMEQGGIV-EIIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLL 281 (341)
Q Consensus 214 ~~~~~~v~~ll~~lG~~-~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~ 281 (341)
+.++.++++|+.+|.. +++++........+.. +.+.+..+..+.|+ +.+.|+++++..+++..+.
T Consensus 142 -~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~--N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~ 210 (287)
T 3pef_A 142 -NLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVV--NMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGA 210 (287)
T ss_dssp -HHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST
T ss_pred -HHHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 7889999999999975 4566655555555543 34444444444443 5689999999999888754
No 35
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.81 E-value=2.1e-19 Score=168.43 Aligned_cols=198 Identities=16% Similarity=0.189 Sum_probs=144.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeC-hHHHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMK-PQYLDSAIQ 142 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~-~~~v~~vl~ 142 (341)
|||+|||+|+||.+|+++|.++|+ +|++|+|++++++.+.+. |+ ...++.++++++|+||+||| +.++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~----~V~~~d~~~~~~~~~~~~-g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~ 78 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY----LLNVFDLVQSAVDGLVAA-GASAARSARDAVQGADVVISMLPASQHVEGLYL 78 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC----EEEEECSSHHHHHHHHHT-TCEECSSHHHHHTTCSEEEECCSCHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC----eEEEEcCCHHHHHHHHHC-CCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHc
Confidence 689999999999999999999995 999999999999988874 88 77889999999999999997 678999998
Q ss_pred ---HhhhcccccCCCcEEEEecCCCCH--HHHHHhccccCCCCCCCCeEEEEcCCchhhh--cCc-eEEEEeCCCCCccH
Q psy316 143 ---GLVNDKVTLNSSRCIISMLVGVDL--ETLKKKLSVLVPNPNDAPTIIRVMPNTAMKY--GKG-ITGMCHDVHLDKES 214 (341)
Q Consensus 143 ---~i~~~~l~~~~~~iIVs~~agi~~--~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v--~~g-~~~l~~~~~~~~~~ 214 (341)
++ .+.+ .++++||++++.... +.+.+.++. .+.. ++.. |..+... ..| .+.+..+ ++
T Consensus 79 ~~~~~-~~~l--~~~~~vi~~st~~~~~~~~l~~~~~~-----~g~~-~~~~-pv~~~~~~~~~g~l~~~~~g---~~-- 143 (302)
T 2h78_A 79 DDDGL-LAHI--APGTLVLECSTIAPTSARKIHAAARE-----RGLA-MLDA-PVSGGTAGAAAGTLTFMVGG---DA-- 143 (302)
T ss_dssp SSSCG-GGSS--CSSCEEEECSCCCHHHHHHHHHHHHH-----TTCC-EEEC-CEESCHHHHHHTCEEEEEES---CH--
T ss_pred CchhH-HhcC--CCCcEEEECCCCCHHHHHHHHHHHHH-----cCCE-EEEE-EccCChhhHhcCCceEEeCC---CH--
Confidence 78 7778 789999987544332 345555542 2345 5653 5433222 233 3445554 35
Q ss_pred HHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHH
Q psy316 215 EHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLLKGS 284 (341)
Q Consensus 215 ~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~~gs 284 (341)
+.++.++++|+.+|..+ ++++.....+..+.. +.+++..+..+.|+ +.+.|++.++..+++..+...+
T Consensus 144 ~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~--n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s 215 (302)
T 2h78_A 144 EALEKARPLFEAMGRNIFHAGPDGAGQVAKVCN--NQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGN 215 (302)
T ss_dssp HHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCC
T ss_pred HHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCC
Confidence 88999999999999764 566655555555543 34444344444443 5789999999999888765443
No 36
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1.1e-18 Score=174.52 Aligned_cols=200 Identities=14% Similarity=0.093 Sum_probs=149.2
Q ss_pred CCCCCCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCc-C---CCc-cccChHHHhhc---CCEEEE
Q psy316 59 HHVPMWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPE-P---MDF-ALNDNHRIIKE---AEYVFL 130 (341)
Q Consensus 59 ~~~~m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~-~---~g~-~~~s~~e~~~~---aDvIil 130 (341)
||--|..+|||||+|+||++|+++|.++|+ +|++|||++++++.+.+ + .|+ .+.++.++++. +|+||+
T Consensus 5 ~~~~~~~~IgvIGlG~MG~~lA~~La~~G~----~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil 80 (497)
T 2p4q_A 5 HHHHMSADFGLIGLAVMGQNLILNAADHGF----TVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVML 80 (497)
T ss_dssp ----CCCSEEEECCSHHHHHHHHHHHHTTC----CEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEE
T ss_pred ccccCCCCEEEEeeHHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEE
Confidence 344599999999999999999999999995 99999999999988876 3 367 67788888876 999999
Q ss_pred eeCh-HHHHHHHHHhhhcccccCCCcEEEEecCCCCH--HHHHHhccccCCCCCCCCeEEEEcC--CchhhhcCceEEEE
Q psy316 131 AMKP-QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL--ETLKKKLSVLVPNPNDAPTIIRVMP--NTAMKYGKGITGMC 205 (341)
Q Consensus 131 aV~~-~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~--~~l~~~l~~~~~~~~~~~~vvr~mp--n~p~~v~~g~~~l~ 205 (341)
|||+ +.++++++++ .+.+ +++++||++.++.+. ..+.+.+.. .+.. ++. +| +.|.....|.+++.
T Consensus 81 ~Vp~~~~v~~vl~~l-~~~l--~~g~iIId~s~~~~~~~~~l~~~l~~-----~g~~-~v~-~pVsgg~~~a~~G~~im~ 150 (497)
T 2p4q_A 81 LVKAGAPVDALINQI-VPLL--EKGDIIIDGGNSHFPDSNRRYEELKK-----KGIL-FVG-SGVSGGEEGARYGPSLMP 150 (497)
T ss_dssp CCCSSHHHHHHHHHH-GGGC--CTTCEEEECSCCCHHHHHHHHHHHHH-----TTCE-EEE-EEEESHHHHHHHCCEEEE
T ss_pred EcCChHHHHHHHHHH-HHhC--CCCCEEEECCCCChhHHHHHHHHHHH-----cCCc-eeC-CCcccChhHhhcCCeEEe
Confidence 9998 6899999999 9988 889999999877653 345555541 2333 332 34 45555566666666
Q ss_pred eCCCCCccHHHHHHHHHHHHhcCCe-------EEcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHH-cCCCHHHHH
Q psy316 206 HDVHLDKESEHLNMAIKIMEQGGIV-------EIIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVK-QGIPRDMAL 274 (341)
Q Consensus 206 ~~~~~~~~~~~~~~v~~ll~~lG~~-------~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~-~Gl~~~~a~ 274 (341)
.++ + +.++.++++|+.+|.. .++++........+.. +.+.+.++..+.|+ +.+ +|++.+++.
T Consensus 151 gg~---~--e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~--N~~~~~~~~~laEa~~l~~~~lGl~~~~~~ 223 (497)
T 2p4q_A 151 GGS---E--EAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVH--NGIEYGDMQLICEAYDIMKRLGGFTDKEIS 223 (497)
T ss_dssp EEC---G--GGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred cCC---H--HHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHccCCCHHHHH
Confidence 553 4 7889999999999976 3455544444444432 45667777888887 567 599999999
Q ss_pred HHHHH
Q psy316 275 RIGAQ 279 (341)
Q Consensus 275 ~lv~~ 279 (341)
+++..
T Consensus 224 ~~~~~ 228 (497)
T 2p4q_A 224 DVFAK 228 (497)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88854
No 37
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.81 E-value=1.5e-19 Score=168.63 Aligned_cols=190 Identities=16% Similarity=0.188 Sum_probs=132.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeC-hHHHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMK-PQYLDSAIQ 142 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~-~~~v~~vl~ 142 (341)
|||+|||+|+||++++++|.++|+ +|++|+|++++++.+.+ .|+ ...++.+++.++|+||+||| ++++++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~----~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~ 75 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGY----PLIIYDVFPDACKEFQD-AGEQVVSSPADVAEKADRIITMLPTSINAIEAYS 75 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTC----CEEEECSSTHHHHHHHT-TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHH-cCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHh
Confidence 589999999999999999999984 89999999999988877 487 67788888999999999995 778999987
Q ss_pred Hhh--hcccccCCCcEEEEecCCCCHHHHHH---hccccCCCCCCCCeEEEEcCCchhhhc-----CceEEEEeCCCCCc
Q psy316 143 GLV--NDKVTLNSSRCIISMLVGVDLETLKK---KLSVLVPNPNDAPTIIRVMPNTAMKYG-----KGITGMCHDVHLDK 212 (341)
Q Consensus 143 ~i~--~~~l~~~~~~iIVs~~agi~~~~l~~---~l~~~~~~~~~~~~vvr~mpn~p~~v~-----~g~~~l~~~~~~~~ 212 (341)
++. .+.+ +++++||+ +++++.+.+++ .++. .+ . .+|+.|...+ .|...++.+. ++
T Consensus 76 ~~~~~~~~l--~~~~~vv~-~s~~~~~~~~~~~~~~~~-----~g-~----~~~~~p~~~g~~~a~~~~~~~~~~~--~~ 140 (296)
T 2gf2_A 76 GANGILKKV--KKGSLLID-SSTIDPAVSKELAKEVEK-----MG-A----VFMDAPVSGGVGAARSGNLTFMVGG--VE 140 (296)
T ss_dssp STTSGGGTC--CTTCEEEE-CSCCCHHHHHHHHHHHHH-----TT-C----EEEECCEESHHHHHHHTCEEEEEES--CG
T ss_pred CchhHHhcC--CCCCEEEE-CCCCCHHHHHHHHHHHHH-----cC-C----EEEEcCCCCChhHHhcCcEEEEeCC--CH
Confidence 640 3456 68889999 78888866553 3331 11 1 2233343322 4444444332 34
Q ss_pred cHHHHHHHHHHHHhcCCeEE-cCCCchhHHHHHhcchHHHH----HHHHHHHHHHHHHcCCCHHHHHHHHHH
Q psy316 213 ESEHLNMAIKIMEQGGIVEI-IPESMMNSFGAIAGSGCAYL----FLVMDAMADGAVKQGIPRDMALRIGAQ 279 (341)
Q Consensus 213 ~~~~~~~v~~ll~~lG~~~~-v~e~~~d~~~al~g~gpa~~----~~~~eal~ea~~~~Gl~~~~a~~lv~~ 279 (341)
+..+.++++|+.+|..++ ++.........+.. +.+. ..+.|++. .+.+.|++++++.+++..
T Consensus 141 --~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~--n~~~~~~~~~~~Ea~~-~~~~~G~~~~~~~~~~~~ 207 (296)
T 2gf2_A 141 --DEFAAAQELLGCMGSNVVYCGAVGTGQAAKICN--NMLLAISMIGTAEAMN-LGIRLGLDPKLLAKILNM 207 (296)
T ss_dssp --GGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHH--HHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHh
Confidence 788999999999998654 44322222222221 1122 24455554 577999999999988776
No 38
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.81 E-value=1.8e-19 Score=169.16 Aligned_cols=198 Identities=11% Similarity=0.134 Sum_probs=142.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhc-----C-CCCCCeEEEEcCChhhhhhcCcCCCc-ccc-------------ChHHHh
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRT-----G-LCIPAQIIASAPSERFKLHWPEPMDF-ALN-------------DNHRII 122 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~-----G-~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~-------------s~~e~~ 122 (341)
|+|||+|||+|+||++++..|.++ | + +|++|+| +++++.+.++.|+ ... +..+.+
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~----~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 81 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLL----EVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEV 81 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSE----EEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCC----CEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCcccc
Confidence 457999999999999999999998 7 5 9999999 7888877652255 221 345567
Q ss_pred hcCCEEEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCCCH-HHHHHhccccCCCCCCCCeEEEEcCCchhhh----
Q psy316 123 KEAEYVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL-ETLKKKLSVLVPNPNDAPTIIRVMPNTAMKY---- 197 (341)
Q Consensus 123 ~~aDvIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~-~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v---- 197 (341)
..+|+||+|||++++.++++++ .+.+ +++++||++.+|+.. +.+++.++ . .+ +++.+++.++..
T Consensus 82 ~~~D~vil~vk~~~~~~v~~~i-~~~l--~~~~~iv~~~nG~~~~~~l~~~l~------~-~~-v~~g~~~~~a~~~~pg 150 (317)
T 2qyt_A 82 GTVDYILFCTKDYDMERGVAEI-RPMI--GQNTKILPLLNGADIAERMRTYLP------D-TV-VWKGCVYISARKSAPG 150 (317)
T ss_dssp CCEEEEEECCSSSCHHHHHHHH-GGGE--EEEEEEEECSCSSSHHHHHTTTSC------T-TT-BCEEEEEEEEEEEETT
T ss_pred CCCCEEEEecCcccHHHHHHHH-Hhhc--CCCCEEEEccCCCCcHHHHHHHCC------C-Cc-EEEEEEEEEEEEcCCC
Confidence 8999999999999999999999 8888 778899999999987 56777776 2 35 566665544332
Q ss_pred -----cCceEE-EEeC-CCCCccHHHHHHHHHHHHhcCCeEEcCCC-------------chhHHHHHhcchHHHHH----
Q psy316 198 -----GKGITG-MCHD-VHLDKESEHLNMAIKIMEQGGIVEIIPES-------------MMNSFGAIAGSGCAYLF---- 253 (341)
Q Consensus 198 -----~~g~~~-l~~~-~~~~~~~~~~~~v~~ll~~lG~~~~v~e~-------------~~d~~~al~g~gpa~~~---- 253 (341)
+.|... +... +..+. +.. .+.++|+..|..+++.++ .++.++++.+++++++.
T Consensus 151 ~~~~~~~g~~~~ig~~~~~~~~--~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~ 227 (317)
T 2qyt_A 151 LITLEADRELFYFGSGLPEQTD--DEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHE 227 (317)
T ss_dssp EEEEEEEEEEEEEECCSSSCCH--HHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCH
T ss_pred EEEEcCCCceEEEcCCCCCCcC--HHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHH
Confidence 334333 2221 22234 666 899999999988777665 67888999999998874
Q ss_pred -HHHHHHHHH---HHHcCCCHH--HHHHHHHH
Q psy316 254 -LVMDAMADG---AVKQGIPRD--MALRIGAQ 279 (341)
Q Consensus 254 -~~~eal~ea---~~~~Gl~~~--~a~~lv~~ 279 (341)
.+...+.|. +.+.|++.+ ...+++..
T Consensus 228 ~~~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~ 259 (317)
T 2qyt_A 228 PELLSLLEEVAELFRAKYGQVPDDVVQQLLDK 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCChHHHHHHHHH
Confidence 222333332 457898853 44555443
No 39
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.81 E-value=5.5e-18 Score=162.93 Aligned_cols=248 Identities=15% Similarity=0.152 Sum_probs=166.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC-------------Cc-cccChHHHhhcCCEEE
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM-------------DF-ALNDNHRIIKEAEYVF 129 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~-------------g~-~~~s~~e~~~~aDvIi 129 (341)
+|||+|||+|+||++++..|.++|+ +|++|+|++++++.+++.. ++ .+.++.++++++|+||
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~----~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVi 104 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ----KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDIL 104 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC----CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEE
Confidence 4799999999999999999999994 9999999998887765421 13 3467788899999999
Q ss_pred EeeChHHHHHHHHHhhhcccccCCCcEEEEecCCCCHH------HHHHhccccCCCCCCCCeEEEEcCCchhhhcCce-E
Q psy316 130 LAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLE------TLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGI-T 202 (341)
Q Consensus 130 laV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~------~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~-~ 202 (341)
+|||++.++++++++ .+++ +++++||++++|+..+ .+++.++ . .++.+...|+...++..+. +
T Consensus 105 laVp~~~~~~vl~~i-~~~l--~~~~ivvs~~kGi~~~t~~~se~i~~~l~------~-~~~~vlsgP~~a~ev~~g~pt 174 (356)
T 3k96_A 105 IVVPSFAFHEVITRM-KPLI--DAKTRIAWGTKGLAKGSRLLHEVVATELG------Q-VPMAVISGPSLATEVAANLPT 174 (356)
T ss_dssp ECCCHHHHHHHHHHH-GGGC--CTTCEEEECCCSCBTTTBCHHHHHHHHHC------S-CCEEEEESSCCHHHHHTTCCE
T ss_pred ECCCHHHHHHHHHHH-HHhc--CCCCEEEEEeCCCCcCccCHHHHHHHHcC------C-CCEEEEECccHHHHHHcCCCe
Confidence 999999999999999 9999 8899999999999874 4666666 2 2325678899888776653 3
Q ss_pred EEEeCCCCCccHHHHHHHHHHHHhcCCeEEcCCCchh--------HHHHHh-c-------chHHHHHHHHHHHHHH---H
Q psy316 203 GMCHDVHLDKESEHLNMAIKIMEQGGIVEIIPESMMN--------SFGAIA-G-------SGCAYLFLVMDAMADG---A 263 (341)
Q Consensus 203 ~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~~~d--------~~~al~-g-------~gpa~~~~~~eal~ea---~ 263 (341)
.++.+. .+. +..+.++++|+..|..++++++... .+.++. | ..+++.+.+..++.|. +
T Consensus 175 ~~via~-~~~--~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~ 251 (356)
T 3k96_A 175 AVSLAS-NNS--QFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLV 251 (356)
T ss_dssp EEEEEE-SCH--HHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEec-CCH--HHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHH
Confidence 222221 234 7888999999999988877655322 111211 1 1234445555555554 5
Q ss_pred HHcCCCHHHHHH------HHHHHHHH--H-----HHHHHhhhhhccccCCCChHHHHHhc-CCC-chHHHHHHHHH-HhC
Q psy316 264 VKQGIPRDMALR------IGAQLLKG--S-----GQLVHKDLLRMDHAAQAHPAVIKDQI-CSP-GGSTIAGIHAL-EKA 327 (341)
Q Consensus 264 ~~~Gl~~~~a~~------lv~~~~~g--s-----~~l~~~~~~~~~~~~~~~p~~l~~~v-~tp-gG~t~~~l~~l-~~~ 327 (341)
.+.|.+++++.. ++.. +.+ + ..++- .|.++++..+.. .+. |=.|.+.+..| ++.
T Consensus 252 ~a~G~~~~t~~gl~g~gDl~~t-c~s~~sRN~~~G~~l~---------~g~~~~~~~~~~~~~~eG~~t~~~~~~la~~~ 321 (356)
T 3k96_A 252 SVFGGKQETLTGLAGLGDLVLT-CTDNQSRNRRFGLALG---------EGVDKKEAQQAIGQAIEGLYNTDQVHALAQKH 321 (356)
T ss_dssp HHTTCCHHHHTSTTTHHHHHHH-HHCTTCHHHHHHHHHH---------HTCCHHHHHHHHCSCCSHHHHHHHHHHHHHHT
T ss_pred HHhCCChHhhcccchhhHHHHh-ccCCCCccHHHHHHHH---------CCCCHHHHHHHcCCccchHHHHHHHHHHHHHc
Confidence 689999998763 2221 111 0 11121 356777655443 233 33344444444 446
Q ss_pred CchHHHHHHHH
Q psy316 328 GVRTPFSSAAR 338 (341)
Q Consensus 328 ~~~~~~~~a~~ 338 (341)
++.--+.+++.
T Consensus 322 ~v~~Pi~~~v~ 332 (356)
T 3k96_A 322 AIEMPLTFQVH 332 (356)
T ss_dssp TCCCHHHHHHH
T ss_pred CCCCcHHHHHH
Confidence 77666666554
No 40
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.81 E-value=1.3e-18 Score=164.76 Aligned_cols=195 Identities=11% Similarity=0.122 Sum_probs=139.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeC-hHHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMK-PQYLDSA 140 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~-~~~v~~v 140 (341)
..|||+|||+|+||..|+++|.++|+ +|++|||++++++.+.+. |+ ...++.++++++|+||+||| +..++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~----~V~~~dr~~~~~~~l~~~-g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v 104 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGY----ALQVWNRTPARAASLAAL-GATIHEQARAAARDADIVVSMLENGAVVQDV 104 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTC----EEEEECSCHHHHHHHHTT-TCEEESSHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCC----eEEEEcCCHHHHHHHHHC-CCEeeCCHHHHHhcCCEEEEECCCHHHHHHH
Confidence 45799999999999999999999995 999999999999998874 88 77899999999999999999 5788999
Q ss_pred HH--HhhhcccccCCCcEEEEecCCCCHH---HHHHhccccCCCCCCCCeEEEEcCC--chhhhcCce-EEEEeCCCCCc
Q psy316 141 IQ--GLVNDKVTLNSSRCIISMLVGVDLE---TLKKKLSVLVPNPNDAPTIIRVMPN--TAMKYGKGI-TGMCHDVHLDK 212 (341)
Q Consensus 141 l~--~i~~~~l~~~~~~iIVs~~agi~~~---~l~~~l~~~~~~~~~~~~vvr~mpn--~p~~v~~g~-~~l~~~~~~~~ 212 (341)
+. ++ .+.+ .++++||++++ +++. .+.+.+.. .+.. ++.. |- .+.....|. ++++.++ +
T Consensus 105 ~~~~~~-~~~l--~~~~~vi~~st-~~~~~~~~~~~~~~~-----~g~~-~~~~-pv~g~~~~a~~g~l~i~~gg~---~ 170 (320)
T 4dll_A 105 LFAQGV-AAAM--KPGSLFLDMAS-ITPREARDHAARLGA-----LGIA-HLDT-PVSGGTVGAEQGTLVIMAGGK---P 170 (320)
T ss_dssp HTTTCH-HHHC--CTTCEEEECSC-CCHHHHHHHHHHHHH-----TTCE-EEEC-CEECHHHHHHHTCEEEEEESC---H
T ss_pred HcchhH-HhhC--CCCCEEEecCC-CCHHHHHHHHHHHHH-----cCCE-EEeC-CCcCCHhHHhcCCeeEEeCCC---H
Confidence 87 77 7777 78999998854 4443 33343431 1223 3321 21 122222343 5555553 4
Q ss_pred cHHHHHHHHHHHHhcCCe-EEcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHH
Q psy316 213 ESEHLNMAIKIMEQGGIV-EIIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQLL 281 (341)
Q Consensus 213 ~~~~~~~v~~ll~~lG~~-~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~~~ 281 (341)
+.++.++++|+.+ .. +++++......+.+.. +.+.+..+..+.|+ +.+.|++.++..+++..+.
T Consensus 171 --~~~~~~~~ll~~~-~~~~~~g~~g~a~~~Kl~~--N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~ 238 (320)
T 4dll_A 171 --ADFERSLPLLKVF-GRATHVGPHGSGQLTKLAN--QMIVGITIGAVAEALLFATKGGADMAKVKEAITGGF 238 (320)
T ss_dssp --HHHHHHHHHHHHH-EEEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTST
T ss_pred --HHHHHHHHHHHhc-CCEEEeCCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccc
Confidence 8889999999999 54 4565544444444433 44555555555554 5689999999999887664
No 41
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.79 E-value=3.9e-18 Score=161.59 Aligned_cols=194 Identities=10% Similarity=0.006 Sum_probs=145.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC----------CC--------------c-cccChH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP----------MD--------------F-ALNDNH 119 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~----------~g--------------~-~~~s~~ 119 (341)
+||+|||+|.||.+||..|+++|+ +|++|||++++++.+.+. .| + .+.++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~----~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ 82 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF----RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHH
Confidence 689999999999999999999995 999999999887765321 12 3 456788
Q ss_pred HHhhcCCEEEEeeCh--HHHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhh
Q psy316 120 RIIKEAEYVFLAMKP--QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKY 197 (341)
Q Consensus 120 e~~~~aDvIilaV~~--~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v 197 (341)
+++++||+||+|||. +..+.++.++ .+++ +++++|+|.+++++++.+.+.++ ...+ +++.||+.|...
T Consensus 83 eav~~aDlVieavpe~~~~k~~v~~~l-~~~~--~~~~Ii~s~tS~i~~~~la~~~~------~~~r-~ig~Hp~~P~~~ 152 (319)
T 2dpo_A 83 EAVEGVVHIQECVPENLDLKRKIFAQL-DSIV--DDRVVLSSSSSCLLPSKLFTGLA------HVKQ-CIVAHPVNPPYY 152 (319)
T ss_dssp HHTTTEEEEEECCCSCHHHHHHHHHHH-HTTC--CSSSEEEECCSSCCHHHHHTTCT------TGGG-EEEEEECSSTTT
T ss_pred HHHhcCCEEEEeccCCHHHHHHHHHHH-HhhC--CCCeEEEEeCCChHHHHHHHhcC------CCCC-eEEeecCCchhh
Confidence 889999999999996 3456788888 8888 88999999999999999988876 3467 899999888765
Q ss_pred cCceEEEEeCCCCCccHHHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q psy316 198 GKGITGMCHDVHLDKESEHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRI 276 (341)
Q Consensus 198 ~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~l 276 (341)
.. ...+++++..++ +.++.++++++.+|+.. ++..+.-..+. ..-.++.+.|++.- +.+.|+++++..++
T Consensus 153 ~~-lveiv~g~~t~~--e~~~~~~~l~~~lGk~~v~v~~~~~Gfi~-----Nrll~a~~~EA~~l-~~~g~~~~~~id~a 223 (319)
T 2dpo_A 153 IP-LVELVPHPETSP--ATVDRTHALMRKIGQSPVRVLKEIDGFVL-----NRLQYAIISEAWRL-VEEGIVSPSDLDLV 223 (319)
T ss_dssp CC-EEEEEECTTCCH--HHHHHHHHHHHHTTCEEEECSSCCTTTTH-----HHHHHHHHHHHHHH-HHTTSSCHHHHHHH
T ss_pred cc-eEEEeCCCCCCH--HHHHHHHHHHHHcCCEEEEECCCcCCchH-----HHHHHHHHHHHHHH-HHhCCCCHHHHHHH
Confidence 54 445677776777 99999999999999865 45433211110 01122334455443 34566799988887
Q ss_pred HHHHH
Q psy316 277 GAQLL 281 (341)
Q Consensus 277 v~~~~ 281 (341)
+..++
T Consensus 224 ~~~g~ 228 (319)
T 2dpo_A 224 MSDGL 228 (319)
T ss_dssp HHTTH
T ss_pred HHhCC
Confidence 76543
No 42
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.79 E-value=2.1e-18 Score=172.03 Aligned_cols=195 Identities=14% Similarity=0.088 Sum_probs=148.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC---Cc-cccChHHHhhc---CCEEEEeeCh-H
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM---DF-ALNDNHRIIKE---AEYVFLAMKP-Q 135 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~---g~-~~~s~~e~~~~---aDvIilaV~~-~ 135 (341)
+++|+|||+|+||++|+++|.++|+ +|++|+|++++++.+.++. |+ .+.++.++++. +|+||+|||+ +
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~----~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~ 90 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGY----TVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGA 90 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTC----CEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCC----eEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHH
Confidence 5789999999999999999999995 8999999999988887643 67 67788888876 9999999998 6
Q ss_pred HHHHHHHHhhhcccccCCCcEEEEecCCCCH--HHHHHhccccCCCCCCCCeEEEEcCC--chhhhcCceEEEEeCCCCC
Q psy316 136 YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL--ETLKKKLSVLVPNPNDAPTIIRVMPN--TAMKYGKGITGMCHDVHLD 211 (341)
Q Consensus 136 ~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~--~~l~~~l~~~~~~~~~~~~vvr~mpn--~p~~v~~g~~~l~~~~~~~ 211 (341)
.++++++++ .+.+ +++++||++.++... ..+.+.+.. .+.. ++. +|. .|.....|.++++.++
T Consensus 91 ~v~~vl~~l-~~~l--~~g~iIId~s~g~~~~t~~l~~~l~~-----~g~~-~v~-~pv~gg~~~a~~g~~i~~gg~--- 157 (480)
T 2zyd_A 91 GTDAAIDSL-KPYL--DKGDIIIDGGNTFFQDTIRRNRELSA-----EGFN-FIG-TGVSGGEEGALKGPSIMPGGQ--- 157 (480)
T ss_dssp HHHHHHHHH-GGGC--CTTCEEEECSCCCHHHHHHHHHHHHH-----TTCE-EEE-EEEESHHHHHHHCCEEEEESC---
T ss_pred HHHHHHHHH-Hhhc--CCCCEEEECCCCCHHHHHHHHHHHHH-----CCCC-eeC-CccccCHhHHhcCCeEEecCC---
Confidence 899999999 9988 889999999888754 445555542 2233 332 343 3444455666665553
Q ss_pred ccHHHHHHHHHHHHhcCCe--------EEcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHH-cCCCHHHHHHHHHH
Q psy316 212 KESEHLNMAIKIMEQGGIV--------EIIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVK-QGIPRDMALRIGAQ 279 (341)
Q Consensus 212 ~~~~~~~~v~~ll~~lG~~--------~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~-~Gl~~~~a~~lv~~ 279 (341)
+ +..+.++++|+.+|.. .++++........+.. +.+.+.++.++.|+ +.+ .|++++++.+++..
T Consensus 158 ~--~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~--N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~ 233 (480)
T 2zyd_A 158 K--EAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVH--NGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTE 233 (480)
T ss_dssp H--HHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred H--HHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 5 8899999999999975 3456655555555543 45566777788887 567 69999999988854
No 43
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.78 E-value=6.3e-18 Score=158.34 Aligned_cols=194 Identities=15% Similarity=0.112 Sum_probs=138.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeC-hHHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMK-PQYLDSA 140 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~-~~~v~~v 140 (341)
|+|||+|||+|+||..|+++|.++|+ +|++|||++++++.+.+ .|+ ...+++++++ +|+||+||| +.+++++
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~G~----~V~~~dr~~~~~~~~~~-~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v 87 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEWPG----GVTVYDIRIEAMTPLAE-AGATLADSVADVAA-ADLIHITVLDDAQVREV 87 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTSTT----CEEEECSSTTTSHHHHH-TTCEECSSHHHHTT-SSEEEECCSSHHHHHHH
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHH-CCCEEcCCHHHHHh-CCEEEEECCChHHHHHH
Confidence 56799999999999999999999995 99999999999998887 488 7788999999 999999999 5789999
Q ss_pred HHHhhhcccccCCCcEEEEecCCCCHH---HHHHhccccCCCCCCCCeEEEEcC--CchhhhcCce-EEEEeCCCCCccH
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVGVDLE---TLKKKLSVLVPNPNDAPTIIRVMP--NTAMKYGKGI-TGMCHDVHLDKES 214 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~agi~~~---~l~~~l~~~~~~~~~~~~vvr~mp--n~p~~v~~g~-~~l~~~~~~~~~~ 214 (341)
++++ .+.+ +++++||++++ +++. .+.+.+.. .+.. ++. .| ..+.....|. ++++.++ +
T Consensus 88 ~~~l-~~~l--~~g~ivv~~st-~~~~~~~~~~~~~~~-----~g~~-~~~-~pv~g~~~~a~~g~l~~~~gg~---~-- 151 (296)
T 3qha_A 88 VGEL-AGHA--KPGTVIAIHST-ISDTTAVELARDLKA-----RDIH-IVD-APVSGGAAAAARGELATMVGAD---R-- 151 (296)
T ss_dssp HHHH-HTTC--CTTCEEEECSC-CCHHHHHHHHHHHGG-----GTCE-EEE-CCEESCHHHHHHTCEEEEEECC---H--
T ss_pred HHHH-HHhc--CCCCEEEEeCC-CCHHHHHHHHHHHHH-----cCCE-EEe-CCCcCCHHHHhcCCccEEecCC---H--
Confidence 9998 8888 88999998754 4443 34444431 1222 332 12 1222233443 4555553 4
Q ss_pred HHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHH------HHHHHHH
Q psy316 215 EHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMA------LRIGAQL 280 (341)
Q Consensus 215 ~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a------~~lv~~~ 280 (341)
+.++.++++|+.+|..+ ++++........+. .+.+.+..+..+.|+ +.+.|++.++. .+++..+
T Consensus 152 ~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~--~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~ 225 (296)
T 3qha_A 152 EVYERIKPAFKHWAAVVIHAGEPGAGTRMKLA--RNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGG 225 (296)
T ss_dssp HHHHHHHHHHHHHEEEEEEEESTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHcCCeEEcCChhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcC
Confidence 88899999999999854 56554333444443 345555555555554 56899999998 6555543
No 44
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.78 E-value=2e-18 Score=153.29 Aligned_cols=170 Identities=13% Similarity=0.153 Sum_probs=136.2
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC-------ccccChHHHhhcCCEEEEeeChHH
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD-------FALNDNHRIIKEAEYVFLAMKPQY 136 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g-------~~~~s~~e~~~~aDvIilaV~~~~ 136 (341)
|||+||| +|+||+++++.|.++|+ +|++++|++++.+.+.++++ +...+..++++++|+||+|+|++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~~~ 76 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGH----EIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEH 76 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC----EEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCChhh
Confidence 5899999 99999999999999984 99999999988877655333 223466778889999999999999
Q ss_pred HHHHHHHhhhcccccCCCcEEEEecCCCC--------------HHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCc--
Q psy316 137 LDSAIQGLVNDKVTLNSSRCIISMLVGVD--------------LETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKG-- 200 (341)
Q Consensus 137 v~~vl~~i~~~~l~~~~~~iIVs~~agi~--------------~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g-- 200 (341)
+.+++.++ .+.+ + +++|+++++|++ .+.+++.++ +.+ ++++||+.+.....+
T Consensus 77 ~~~~~~~l-~~~~--~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~-------~~~-~v~~~~~~~~~~~~~~~ 144 (212)
T 1jay_A 77 AIDTARDL-KNIL--R-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE-------SEK-VVSALHTIPAARFANLD 144 (212)
T ss_dssp HHHHHHHT-HHHH--T-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT-------CSC-EEECCTTCCHHHHHCTT
T ss_pred HHHHHHHH-HHHc--C-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC-------CCe-EEEEccchHHHHhhCcC
Confidence 99999988 8777 4 889999999887 578888777 367 899998877655433
Q ss_pred ----eEEEEeCCCCCccHHHHHHHHHHHHhc-CCeE-EcCCCchhHHHHHhcchHHHHHHHH
Q psy316 201 ----ITGMCHDVHLDKESEHLNMAIKIMEQG-GIVE-IIPESMMNSFGAIAGSGCAYLFLVM 256 (341)
Q Consensus 201 ----~~~l~~~~~~~~~~~~~~~v~~ll~~l-G~~~-~v~e~~~d~~~al~g~gpa~~~~~~ 256 (341)
.+.+++++ ++ +..+.++++|+.+ |..+ ++++ .+....+.+++|+|++...
T Consensus 145 ~~~~~~~~~~g~--~~--~~~~~v~~l~~~~~G~~~~~~~~--~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 145 EKFDWDVPVCGD--DD--ESKKVVMSLISEIDGLRPLDAGP--LSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp CCCCEEEEEEES--CH--HHHHHHHHHHHHSTTEEEEEEES--GGGHHHHHTHHHHHHHHHH
T ss_pred CCCCccEEEECC--cH--HHHHHHHHHHHHcCCCCceeccc--hhHHHHhcchHHHHHHHHH
Confidence 56677664 35 8889999999999 9864 5565 5777778888898887643
No 45
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.77 E-value=4.8e-18 Score=154.91 Aligned_cols=154 Identities=11% Similarity=0.155 Sum_probs=118.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhh--------------hhhcCcCCCc-cccChHHHhhcCCE
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERF--------------KLHWPEPMDF-ALNDNHRIIKEAEY 127 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~--------------~~~l~~~~g~-~~~s~~e~~~~aDv 127 (341)
+.+||+|||+|+||++|+++|.++|+ +|++|+|++++ ++.+.++++. ...++.+++++||+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDv 93 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGH----EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAEL 93 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC----EEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC----EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCE
Confidence 46899999999999999999999995 99999999987 4555544555 66788899999999
Q ss_pred EEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCC----------------C-HHHHHHhccccCCCCCCCCeEEEEc
Q psy316 128 VFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGV----------------D-LETLKKKLSVLVPNPNDAPTIIRVM 190 (341)
Q Consensus 128 IilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi----------------~-~~~l~~~l~~~~~~~~~~~~vvr~m 190 (341)
||+|||++.+.+++.++..+.+ ++++||++++++ . .+.+++.++ +.+ +++.+
T Consensus 94 Vilavp~~~~~~~~~~i~~~~l---~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~-------~~~-vv~~~ 162 (245)
T 3dtt_A 94 VVNATEGASSIAALTAAGAENL---AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFP-------EAK-VVKTL 162 (245)
T ss_dssp EEECSCGGGHHHHHHHHCHHHH---TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHST-------TSE-EEECS
T ss_pred EEEccCcHHHHHHHHHhhhhhc---CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCC-------CCe-EEEee
Confidence 9999999998888877512344 688999998654 2 356777777 467 99999
Q ss_pred CCchhhhcCc--------eEEEEeCCCCCccHHHHHHHHHHHHhcCC-e-EEcCC
Q psy316 191 PNTAMKYGKG--------ITGMCHDVHLDKESEHLNMAIKIMEQGGI-V-EIIPE 235 (341)
Q Consensus 191 pn~p~~v~~g--------~~~l~~~~~~~~~~~~~~~v~~ll~~lG~-~-~~v~e 235 (341)
++.++.+..| .+++++++ ++ +.++.++++|+.+|. . +++++
T Consensus 163 ~~~~a~v~~~~~~a~~g~~~~~v~g~--d~--~~~~~v~~ll~~~g~~~~~~~G~ 213 (245)
T 3dtt_A 163 NTMNASLMVDPGRAAGGDHSVFVSGN--DA--AAKAEVATLLKSLGHQDVIDLGD 213 (245)
T ss_dssp TTSCHHHHHCGGGTGGGCCCEEEECS--CH--HHHHHHHHHHHHTTCCCEEEEES
T ss_pred cccCHHHhcCccccCCCCeeEEEECC--CH--HHHHHHHHHHHHcCCCceeccCc
Confidence 9877655322 23455553 35 889999999999996 3 45654
No 46
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.77 E-value=2e-17 Score=153.89 Aligned_cols=193 Identities=11% Similarity=0.016 Sum_probs=143.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC----------C--------------c-cccChH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM----------D--------------F-ALNDNH 119 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~----------g--------------~-~~~s~~ 119 (341)
+||+|||+|+||++||..|.++|+ +|++|||++++++.+.+.. | + .+.++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~----~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~ 80 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF----AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA 80 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC----eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHH
Confidence 689999999999999999999995 9999999998877654320 1 2 456777
Q ss_pred HHhhcCCEEEEeeChH--HHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhh
Q psy316 120 RIIKEAEYVFLAMKPQ--YLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKY 197 (341)
Q Consensus 120 e~~~~aDvIilaV~~~--~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v 197 (341)
+++++||+||+|||++ ...+++.++ .+.+ +++++++|.+++++++.+.+.+. ...+ ++..+|..|...
T Consensus 81 ~~~~~aDlVi~av~~~~~~~~~v~~~l-~~~~--~~~~il~s~tS~~~~~~la~~~~------~~~~-~ig~h~~~p~~~ 150 (283)
T 4e12_A 81 QAVKDADLVIEAVPESLDLKRDIYTKL-GELA--PAKTIFATNSSTLLPSDLVGYTG------RGDK-FLALHFANHVWV 150 (283)
T ss_dssp HHTTTCSEEEECCCSCHHHHHHHHHHH-HHHS--CTTCEEEECCSSSCHHHHHHHHS------CGGG-EEEEEECSSTTT
T ss_pred HHhccCCEEEEeccCcHHHHHHHHHHH-HhhC--CCCcEEEECCCCCCHHHHHhhcC------CCcc-eEEEccCCCccc
Confidence 8889999999999976 777888888 8888 88999999999999998888776 3457 889998878766
Q ss_pred cCceEEEEeCCCCCccHHHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q psy316 198 GKGITGMCHDVHLDKESEHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRI 276 (341)
Q Consensus 198 ~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~l 276 (341)
...+ .++++...++ +..+.++++++.+|+.. +++.+....+.. ..+...+.|++.. ..+.|.++++..++
T Consensus 151 ~~lv-evv~~~~t~~--~~~~~~~~l~~~~g~~~v~v~~~~~g~i~n-----r~~~~~~~ea~~l-~~~g~~~~~~id~~ 221 (283)
T 4e12_A 151 NNTA-EVMGTTKTDP--EVYQQVVEFASAIGMVPIELKKEKAGYVLN-----SLLVPLLDAAAEL-LVDGIADPETIDKT 221 (283)
T ss_dssp SCEE-EEEECTTSCH--HHHHHHHHHHHHTTCEEEECSSCCTTTTHH-----HHHHHHHHHHHHH-HHTTSCCHHHHHHH
T ss_pred CceE-EEEeCCCCCH--HHHHHHHHHHHHcCCEEEEEecCCCCEEeh-----HHHHHHHHHHHHH-HHhCCCCHHHHHHH
Confidence 6554 5566666667 89999999999999864 454332222110 1122334444433 34556799887776
Q ss_pred HHHH
Q psy316 277 GAQL 280 (341)
Q Consensus 277 v~~~ 280 (341)
+...
T Consensus 222 ~~~~ 225 (283)
T 4e12_A 222 WRIG 225 (283)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6543
No 47
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.76 E-value=3.8e-18 Score=157.97 Aligned_cols=203 Identities=13% Similarity=0.119 Sum_probs=139.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC--C----c-cccChHHHhhcCCEEEEeeChHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM--D----F-ALNDNHRIIKEAEYVFLAMKPQYL 137 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~--g----~-~~~s~~e~~~~aDvIilaV~~~~v 137 (341)
|||+|||+|+||++++..|.++|+ +|++|+|++++++.+.... | . ...+..+.+.++|+||+|||++.+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~ 76 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGH----EVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQV 76 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC----CEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHhH
Confidence 589999999999999999999984 9999999988777664421 2 1 122335677899999999999999
Q ss_pred HHHHHHhhhcccccCCCcEEEEecCCCCH-HHHHHhccccCCCCCCCCeEEEEcCCchhhhcCceEEEEeCCCCCccHHH
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLVGVDL-ETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGITGMCHDVHLDKESEH 216 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~agi~~-~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l~~~~~~~~~~~~ 216 (341)
.++++++ .+.+ +++++||++.+|+.. +.+++.++.++....... ..+.+| .+...+.|.+.+...+. ++ +.
T Consensus 77 ~~v~~~l-~~~l--~~~~~vv~~~~g~~~~~~l~~~~~~~~~g~~~~~-~~~~~p-~~~~~~~g~~~i~~~~~-~~--~~ 148 (291)
T 1ks9_A 77 SDAVKSL-ASTL--PVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHA-ARRDGN-VIIHVANGITHIGPARQ-QD--GD 148 (291)
T ss_dssp HHHHHHH-HTTS--CTTSCEEEECSSSCTTGGGTTCCSCEEEEEECCE-EEEETT-EEEEEECCCEEEEESSG-GG--TT
T ss_pred HHHHHHH-HhhC--CCCCEEEEecCCCCcHHHHHHhcCCeEEEEEeEc-cEEcCC-EEEEecccceEEccCCC-Cc--ch
Confidence 9999999 9888 889999999999875 455555552100000012 346677 56666777666654321 23 56
Q ss_pred HHHHHHHHHhcCCeEEcCCC-------------chhHHHHHhcchHHH-------HHHHHHHHHHHHHHcCCCH--HHHH
Q psy316 217 LNMAIKIMEQGGIVEIIPES-------------MMNSFGAIAGSGCAY-------LFLVMDAMADGAVKQGIPR--DMAL 274 (341)
Q Consensus 217 ~~~v~~ll~~lG~~~~v~e~-------------~~d~~~al~g~gpa~-------~~~~~eal~ea~~~~Gl~~--~~a~ 274 (341)
.+.++++|+.+|..+++.++ .++.++++.++.... +...+..+...+.+.|++. +...
T Consensus 149 ~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~ 228 (291)
T 1ks9_A 149 YSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLR 228 (291)
T ss_dssp CTHHHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence 67899999999988776555 567888888875332 2222222233356889985 4444
Q ss_pred HHHHH
Q psy316 275 RIGAQ 279 (341)
Q Consensus 275 ~lv~~ 279 (341)
+.+.+
T Consensus 229 ~~~~~ 233 (291)
T 1ks9_A 229 DYVMQ 233 (291)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 48
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.76 E-value=1.7e-17 Score=156.53 Aligned_cols=166 Identities=15% Similarity=0.175 Sum_probs=124.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc---------------cccChHHHhhcCCE
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF---------------ALNDNHRIIKEAEY 127 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~---------------~~~s~~e~~~~aDv 127 (341)
|+|||+|||+|+||++++..|.++|+ +|++|+|++ .+.+++ .|+ .+.+ .+.+..+|+
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~----~V~~~~r~~--~~~i~~-~g~~~~~~~g~~~~~~~~~~~~-~~~~~~~D~ 72 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSGE----DVHFLLRRD--YEAIAG-NGLKVFSINGDFTLPHVKGYRA-PEEIGPMDL 72 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTSC----CEEEECSTT--HHHHHH-TCEEEEETTCCEEESCCCEESC-HHHHCCCSE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC----eEEEEEcCc--HHHHHh-CCCEEEcCCCeEEEeeceeecC-HHHcCCCCE
Confidence 67899999999999999999999984 999999986 355543 232 1233 344778999
Q ss_pred EEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCCC-HHHHHHhccccCCCCCCCCeEEEEc---------CCchhhh
Q psy316 128 VFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVD-LETLKKKLSVLVPNPNDAPTIIRVM---------PNTAMKY 197 (341)
Q Consensus 128 IilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~-~~~l~~~l~~~~~~~~~~~~vvr~m---------pn~p~~v 197 (341)
||+|||++++.++++++ ++.+ .++++||++.+|+. .+.+++.++ ..+ +++.+ |+.....
T Consensus 73 vilavk~~~~~~~l~~l-~~~l--~~~~~iv~l~nGi~~~~~l~~~~~-------~~~-v~~~~~~~~a~~~~p~~v~~~ 141 (312)
T 3hn2_A 73 VLVGLKTFANSRYEELI-RPLV--EEGTQILTLQNGLGNEEALATLFG-------AER-IIGGVAFLCSNRGEPGEVHHL 141 (312)
T ss_dssp EEECCCGGGGGGHHHHH-GGGC--CTTCEEEECCSSSSHHHHHHHHTC-------GGG-EEEEEEEEECCBCSSSEEEEC
T ss_pred EEEecCCCCcHHHHHHH-Hhhc--CCCCEEEEecCCCCcHHHHHHHCC-------CCc-EEEEEEEeeeEEcCCcEEEEC
Confidence 99999999999999999 9999 88999999999998 567888887 235 55544 4544444
Q ss_pred cCceEEEEeCCCCCccHHHHHHHHHHHHhcCCeEEcCCCc-------------hhHHHHHhcchH
Q psy316 198 GKGITGMCHDVHLDKESEHLNMAIKIMEQGGIVEIIPESM-------------MNSFGAIAGSGC 249 (341)
Q Consensus 198 ~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~~-------------~d~~~al~g~gp 249 (341)
+.|.+.+...+..+. +..+.+.++|+..|..++++++. ++.++++.++..
T Consensus 142 ~~g~~~ig~~~~~~~--~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~ 204 (312)
T 3hn2_A 142 GAGRIILGEFLPRDT--GRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPV 204 (312)
T ss_dssp EEEEEEEEESSCCCS--HHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCH
T ss_pred CCCeEEEecCCCCcc--HHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCH
Confidence 555555544333334 77888999999999888887764 677788887644
No 49
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.76 E-value=4.1e-17 Score=152.98 Aligned_cols=154 Identities=10% Similarity=0.122 Sum_probs=122.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCc----------CCC------------------c-cc
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPE----------PMD------------------F-AL 115 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~----------~~g------------------~-~~ 115 (341)
+||+|||+|+||.+||..|.++|+ +|++|||++++++.+.+ +.| + .+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~----~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 91 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH----TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS 91 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC----eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe
Confidence 589999999999999999999995 99999999987765311 011 3 35
Q ss_pred cChHHHhhcCCEEEEeeChHH--HHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCc
Q psy316 116 NDNHRIIKEAEYVFLAMKPQY--LDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNT 193 (341)
Q Consensus 116 ~s~~e~~~~aDvIilaV~~~~--v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~ 193 (341)
.++.+.+++||+||+|||++. ..+++.++ .+.+ +++++|+|.+++++++.+.+.+. ...+ +++.+|+.
T Consensus 92 ~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l-~~~~--~~~~iv~s~ts~i~~~~l~~~~~------~~~~-~~g~h~~~ 161 (302)
T 1f0y_A 92 TDAASVVHSTDLVVEAIVENLKVKNELFKRL-DKFA--AEHTIFASNTSSLQITSIANATT------RQDR-FAGLHFFN 161 (302)
T ss_dssp SCHHHHTTSCSEEEECCCSCHHHHHHHHHHH-TTTS--CTTCEEEECCSSSCHHHHHTTSS------CGGG-EEEEEECS
T ss_pred cCHHHhhcCCCEEEEcCcCcHHHHHHHHHHH-HhhC--CCCeEEEECCCCCCHHHHHHhcC------Cccc-EEEEecCC
Confidence 677778899999999998743 56788888 8888 78899999999999998887776 3457 88999988
Q ss_pred hhhhcCceEEEEeCCCCCccHHHHHHHHHHHHhcCCeE-EcCC
Q psy316 194 AMKYGKGITGMCHDVHLDKESEHLNMAIKIMEQGGIVE-IIPE 235 (341)
Q Consensus 194 p~~v~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~-~v~e 235 (341)
|...+..+. ++.++..++ +..+.+.++++.+|... ++.+
T Consensus 162 P~~~~~~~~-i~~g~~~~~--e~~~~~~~l~~~~G~~~v~~~~ 201 (302)
T 1f0y_A 162 PVPVMKLVE-VIKTPMTSQ--KTFESLVDFSKALGKHPVSCKD 201 (302)
T ss_dssp STTTCCEEE-EECCTTCCH--HHHHHHHHHHHHTTCEEEEECS
T ss_pred CcccCceEE-EeCCCCCCH--HHHHHHHHHHHHcCCceEEecC
Confidence 877666554 566666677 89999999999999864 4443
No 50
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.75 E-value=3.4e-17 Score=163.13 Aligned_cols=195 Identities=12% Similarity=0.058 Sum_probs=144.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC---Cc-cccChHHHhhc---CCEEEEeeCh-H
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM---DF-ALNDNHRIIKE---AEYVFLAMKP-Q 135 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~---g~-~~~s~~e~~~~---aDvIilaV~~-~ 135 (341)
++||+|||+|+||++|+++|.++|+ +|++|+|++++++.+.+++ |+ .+.++++++.. +|+||+|||+ +
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~----~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~ 80 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY----TVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGA 80 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC----CEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC----EEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCch
Confidence 3689999999999999999999995 8999999999988887644 66 67788888876 9999999998 6
Q ss_pred HHHHHHHHhhhcccccCCCcEEEEecCCCCH--HHHHHhccccCCCCCCCCeEEEEcCC--chhhhcCceEEEEeCCCCC
Q psy316 136 YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL--ETLKKKLSVLVPNPNDAPTIIRVMPN--TAMKYGKGITGMCHDVHLD 211 (341)
Q Consensus 136 ~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~--~~l~~~l~~~~~~~~~~~~vvr~mpn--~p~~v~~g~~~l~~~~~~~ 211 (341)
.++++++++ .+.+ +++++||++.++... ..+.+.+.. .+.. ++ .+|. .+.....|.+++..+ +
T Consensus 81 ~v~~vl~~l-~~~l--~~g~iiId~s~~~~~~~~~l~~~l~~-----~g~~-~v-~~pv~gg~~~a~~g~~i~~gg---~ 147 (474)
T 2iz1_A 81 ATDATIKSL-LPLL--DIGDILIDGGNTHFPDTMRRNAELAD-----SGIN-FI-GTGVSGGEKGALLGPSMMPGG---Q 147 (474)
T ss_dssp HHHHHHHHH-GGGC--CTTCEEEECSCCCHHHHHHHHHHTTT-----SSCE-EE-EEEECSHHHHHHHCCCEEEEE---C
T ss_pred HHHHHHHHH-HhhC--CCCCEEEECCCCCHHHHHHHHHHHHH-----CCCe-EE-CCCCCCChhhhccCCeEEecC---C
Confidence 899999999 8888 889999999888743 455565652 2223 33 2343 233345566555554 3
Q ss_pred ccHHHHHHHHHHHHhcCCe---------EEcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHH-cCCCHHHHHHHHH
Q psy316 212 KESEHLNMAIKIMEQGGIV---------EIIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVK-QGIPRDMALRIGA 278 (341)
Q Consensus 212 ~~~~~~~~v~~ll~~lG~~---------~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~-~Gl~~~~a~~lv~ 278 (341)
+ +..+.++++|+.+|.. .++++........+.. +.+.+.++..+.|+ +.+ .|++.+++.+++.
T Consensus 148 ~--~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~--N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~ 223 (474)
T 2iz1_A 148 K--EAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVH--NGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFE 223 (474)
T ss_dssp H--HHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred H--HHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 5 8889999999999976 2345544444444433 34556666777776 567 7999999888885
Q ss_pred H
Q psy316 279 Q 279 (341)
Q Consensus 279 ~ 279 (341)
.
T Consensus 224 ~ 224 (474)
T 2iz1_A 224 E 224 (474)
T ss_dssp H
T ss_pred H
Confidence 4
No 51
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.75 E-value=4.2e-17 Score=157.50 Aligned_cols=164 Identities=16% Similarity=0.107 Sum_probs=120.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCC---CeEEEEcCChh-----hhhhcCcC-------------CCc-cccChHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIP---AQIIASAPSER-----FKLHWPEP-------------MDF-ALNDNHR 120 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~---~~V~v~~r~~e-----~~~~l~~~-------------~g~-~~~s~~e 120 (341)
|+|||+|||+|+||++|+..|.++|..++ ++|++|+|+++ +++.+.+. .++ .+.++.+
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~e 99 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLAS 99 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHH
Confidence 56799999999999999999999881111 48999999987 76655431 134 4567788
Q ss_pred HhhcCCEEEEeeChHHHHHHHHHhhhc----ccccCCCcEEEEecCCCCH-----HHHHHhccccCCCCCCCCeEEEEcC
Q psy316 121 IIKEAEYVFLAMKPQYLDSAIQGLVND----KVTLNSSRCIISMLVGVDL-----ETLKKKLSVLVPNPNDAPTIIRVMP 191 (341)
Q Consensus 121 ~~~~aDvIilaV~~~~v~~vl~~i~~~----~l~~~~~~iIVs~~agi~~-----~~l~~~l~~~~~~~~~~~~vvr~mp 191 (341)
++.++|+||+|||++++++++.++ .+ .+ +++++||++++|++. +.+.+.+....+ . .. .++.+|
T Consensus 100 a~~~aDvVilav~~~~~~~vl~~i-~~~~~~~l--~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~--~-~~-~v~~gp 172 (375)
T 1yj8_A 100 VINDADLLIFIVPCQYLESVLASI-KESESIKI--ASHAKAISLTKGFIVKKNQMKLCSNYISDFLN--I-PC-SALSGA 172 (375)
T ss_dssp HHTTCSEEEECCCHHHHHHHHHHH-TC---CCC--CTTCEEEECCCSCEEETTEEECHHHHHHHHSS--S-CE-EEEECS
T ss_pred HHcCCCEEEEcCCHHHHHHHHHHH-hhhhhccC--CCCCEEEEeCCccccCCccccCHHHHHHHHcC--C-CE-EEEeCC
Confidence 889999999999999999999999 88 88 889999999988765 233333221111 1 13 678899
Q ss_pred CchhhhcCceE-EEEeCCCCCccHHHHHHHHHHHHhcCCeEEcCCC
Q psy316 192 NTAMKYGKGIT-GMCHDVHLDKESEHLNMAIKIMEQGGIVEIIPES 236 (341)
Q Consensus 192 n~p~~v~~g~~-~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~ 236 (341)
+.+..++.|.. .+..+. .++ +..+.++++|+..|..+++.++
T Consensus 173 ~~a~~v~~g~~~~~~~~~-~~~--~~~~~v~~ll~~~g~~~~~~~d 215 (375)
T 1yj8_A 173 NIAMDVAMENFSEATIGG-NDK--DSLVIWQRVFDLPYFKINCVNE 215 (375)
T ss_dssp CCHHHHHTTCCEEEEEEC-SCH--HHHHHHHHHHCBTTEEEEEESC
T ss_pred chHHHHHhCCCeEEEEec-CCH--HHHHHHHHHhCCCCeEEEEeCC
Confidence 98887766643 222221 234 7788999999999987766444
No 52
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.74 E-value=1.7e-17 Score=159.47 Aligned_cols=161 Identities=16% Similarity=0.186 Sum_probs=119.1
Q ss_pred CCC-eEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC-------------Cc-cccChHHHhhcCCE
Q psy316 63 MWT-KVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM-------------DF-ALNDNHRIIKEAEY 127 (341)
Q Consensus 63 m~~-kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~-------------g~-~~~s~~e~~~~aDv 127 (341)
|+| ||+|||+|+||++|+.+|.++| ++|++|+|++++++.+.+.. ++ .+.++.+++.++|+
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~G----~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDv 88 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKKC----REVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEI 88 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTTE----EEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSS
T ss_pred hccCeEEEECCCHHHHHHHHHHHhCC----CEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCE
Confidence 444 8999999999999999999988 49999999998887765421 23 44677788899999
Q ss_pred EEEeeChHHHHHHHHH----hhhcccccCC-CcEEEEecCCCCHH---HHHHhccccCCCCCCCCeEEEEcCCchhhhcC
Q psy316 128 VFLAMKPQYLDSAIQG----LVNDKVTLNS-SRCIISMLVGVDLE---TLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGK 199 (341)
Q Consensus 128 IilaV~~~~v~~vl~~----i~~~~l~~~~-~~iIVs~~agi~~~---~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~ 199 (341)
||+|||++++.+++.+ + .+.+ ++ +++||++++|++.+ .+.+.+....+ .... .++.+|+.+..++.
T Consensus 89 Vilav~~~~~~~v~~~~~~gl-~~~l--~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~--~~~~-~v~~gp~~~~~~~~ 162 (366)
T 1evy_A 89 ILFVIPTQFLRGFFEKSGGNL-IAYA--KEKQVPVLVCTKGIERSTLKFPAEIIGEFLP--SPLL-SVLAGPSFAIEVAT 162 (366)
T ss_dssp EEECCCHHHHHHHHHHHCHHH-HHHH--HHHTCCEEECCCSCCTTTCCCHHHHHTTTSC--GGGE-EEEESSCCHHHHHT
T ss_pred EEECCChHHHHHHHHHhHHHH-HHhc--CccCCEEEEECCcCCCccccCHHHHHHHHCC--CCcE-EEEeCCChHHHHHh
Confidence 9999999999999998 9 8888 77 88999999898764 23333332111 1113 67888998877666
Q ss_pred ce-EEEEeCCCCCccHHHHHHHHHHHHhc--CCeEEcCCC
Q psy316 200 GI-TGMCHDVHLDKESEHLNMAIKIMEQG--GIVEIIPES 236 (341)
Q Consensus 200 g~-~~l~~~~~~~~~~~~~~~v~~ll~~l--G~~~~v~e~ 236 (341)
|. +.+..+. .++ +..+.++++|+.+ |..+++.++
T Consensus 163 g~~~~~~~~~-~~~--~~~~~v~~ll~~~g~g~~~~~~~d 199 (366)
T 1evy_A 163 GVFTCVSIAS-ADI--NVARRLQRIMSTGDRSFVCWATTD 199 (366)
T ss_dssp TCCEEEEEEC-SSH--HHHHHHHHHHSCTTSSEEEEEESC
T ss_pred CCceEEEEec-CCH--HHHHHHHHHhcCCCCeEEEEEcCC
Confidence 64 2223222 234 7788999999999 776655443
No 53
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.74 E-value=1.2e-16 Score=153.56 Aligned_cols=196 Identities=12% Similarity=0.087 Sum_probs=139.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcC---CEEEEeeChHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEA---EYVFLAMKPQYLDS 139 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~a---DvIilaV~~~~v~~ 139 (341)
.|||+|||+|+||..|+++|.++|+ +|++|||++++++.+.+ .|+ .+.++.++++.+ |+||+|||+.++++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~----~V~v~dr~~~~~~~l~~-~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~ 96 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH----ECVVYDLNVNAVQALER-EGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDS 96 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHT-TTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC----EEEEEeCCHHHHHHHHH-CCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHH
Confidence 3799999999999999999999995 99999999999999887 487 778899999988 99999999989999
Q ss_pred HHHHhhhcccccCCCcEEEEecCCCCH--HHHHHhccccCCCCCCCCeEEEE-cCCchhhhcCceEEEEeCCCCCccHHH
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLVGVDL--ETLKKKLSVLVPNPNDAPTIIRV-MPNTAMKYGKGITGMCHDVHLDKESEH 216 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~agi~~--~~l~~~l~~~~~~~~~~~~vvr~-mpn~p~~v~~g~~~l~~~~~~~~~~~~ 216 (341)
++.++ .+.+ +++++||++.++.+. ..+.+.+.. .+.. ++.+ +...+.....|.++++.++ + +.
T Consensus 97 vl~~l-~~~l--~~g~iiId~st~~~~~~~~~~~~l~~-----~g~~-~vdapVsGg~~~a~~G~~im~GG~---~--~a 162 (358)
T 4e21_A 97 MLQRM-TPLL--AANDIVIDGGNSHYQDDIRRADQMRA-----QGIT-YVDVGTSGGIFGLERGYCLMIGGE---K--QA 162 (358)
T ss_dssp HHHHH-GGGC--CTTCEEEECSSCCHHHHHHHHHHHHT-----TTCE-EEEEEEECGGGHHHHCCEEEEESC---H--HH
T ss_pred HHHHH-HhhC--CCCCEEEeCCCCChHHHHHHHHHHHH-----CCCE-EEeCCCCCCHHHHhcCCeeeecCC---H--HH
Confidence 99999 8888 889999998665432 233344431 2333 3332 1122333334556666664 4 88
Q ss_pred HHHHHHHHHhcC--------------------C-eEEcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHc------
Q psy316 217 LNMAIKIMEQGG--------------------I-VEIIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQ------ 266 (341)
Q Consensus 217 ~~~v~~ll~~lG--------------------~-~~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~------ 266 (341)
++.++++|+.+| . .+++++..-..++.+.. .++++..+.++.|+ +.+.
T Consensus 163 ~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~--n~l~~~~i~~~aE~~~la~~a~~~~~~ 240 (358)
T 4e21_A 163 VERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVH--NGIEYGLMAAYAEGLNILHHANAGKEG 240 (358)
T ss_dssp HHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTTTCC---
T ss_pred HHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhccccccc
Confidence 999999999999 3 45565543334444332 34444444455553 2344
Q ss_pred ------------------CCCHHHHHHHHHHH
Q psy316 267 ------------------GIPRDMALRIGAQL 280 (341)
Q Consensus 267 ------------------Gl~~~~a~~lv~~~ 280 (341)
|++.++..++...+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g 272 (358)
T 4e21_A 241 QGADAETAPLRNPDFYRYDLDLADITEVWRRG 272 (358)
T ss_dssp -----------CGGGCCCCCCHHHHHHHHTTT
T ss_pred ccccccccccccchhcccCCCHHHHHHHHhCc
Confidence 88988888776543
No 54
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.73 E-value=2.6e-16 Score=148.93 Aligned_cols=190 Identities=13% Similarity=0.099 Sum_probs=129.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcC-CCCCCeEEEEcCCh-------hhhhhcCcCCCcccc-ChHHHhhcCCEEEEeeC
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTG-LCIPAQIIASAPSE-------RFKLHWPEPMDFALN-DNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G-~~~~~~V~v~~r~~-------e~~~~l~~~~g~~~~-s~~e~~~~aDvIilaV~ 133 (341)
|.|||+|||+|+||.+|+++|.++| + +|++|||++ +..+.+.+ .|+ .. ++.+++++||+||+|||
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~----~V~~~dr~~~~~~~~~~~~~~~~~-~g~-~~~s~~e~~~~aDvVi~avp 96 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAA----RLAAYDLRFNDPAASGALRARAAE-LGV-EPLDDVAGIACADVVLSLVV 96 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCS----EEEEECGGGGCTTTHHHHHHHHHH-TTC-EEESSGGGGGGCSEEEECCC
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCC----eEEEEeCCCccccchHHHHHHHHH-CCC-CCCCHHHHHhcCCEEEEecC
Confidence 7789999999999999999999998 5 999999997 44555544 355 56 78889999999999999
Q ss_pred hHHHHHHHHHhhhcccccCCCcEEEEecCCCCHH---HHHHhccccCCCCCCCCeEEEE-cCC-chhhhcCceEEEEeCC
Q psy316 134 PQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLE---TLKKKLSVLVPNPNDAPTIIRV-MPN-TAMKYGKGITGMCHDV 208 (341)
Q Consensus 134 ~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~---~l~~~l~~~~~~~~~~~~vvr~-mpn-~p~~v~~g~~~l~~~~ 208 (341)
++...+++.++ .+.+ +++++||+++ ++++. .+.+.+.. .+.. ++.. +.+ .+.. ....+++++++
T Consensus 97 ~~~~~~~~~~i-~~~l--~~~~ivv~~s-t~~p~~~~~~~~~l~~-----~g~~-~~d~pv~g~~~a~-~g~l~i~vgg~ 165 (317)
T 4ezb_A 97 GAATKAVAASA-APHL--SDEAVFIDLN-SVGPDTKALAAGAIAT-----GKGS-FVEGAVMARVPPY-AEKVPILVAGR 165 (317)
T ss_dssp GGGHHHHHHHH-GGGC--CTTCEEEECC-SCCHHHHHHHHHHHHT-----SSCE-EEEEEECSCSTTT-GGGSEEEEEST
T ss_pred CHHHHHHHHHH-Hhhc--CCCCEEEECC-CCCHHHHHHHHHHHHH-----cCCe-EEeccCCCCchhh-cCCEEEEEeCC
Confidence 98888888888 8888 8899999885 55544 34444431 1223 3221 111 2222 22356677764
Q ss_pred CCCccHHHHHHHHHHHHhcCCeE-EcCC-CchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHH
Q psy316 209 HLDKESEHLNMAIKIMEQGGIVE-IIPE-SMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIGAQ 279 (341)
Q Consensus 209 ~~~~~~~~~~~v~~ll~~lG~~~-~v~e-~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv~~ 279 (341)
. + +.++++|+.+|..+ ++++ ........+.. +.+.+..+..+.|+ +.+.|++.+ ..+.+..
T Consensus 166 ~-----~--~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~--N~~~~~~~~~~~E~~~la~~~Gid~~-~~~~l~~ 231 (317)
T 4ezb_A 166 R-----A--VEVAERLNALGMNLEAVGETPGQASSLKMIR--SVMIKGVEALLIEALSSAERAGVTER-ILDSVQE 231 (317)
T ss_dssp T-----H--HHHHHHHHTTTCEEEEEESSTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHH
T ss_pred h-----H--HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHh
Confidence 2 4 78999999999865 5664 34444444433 34555555555554 568999995 4444443
No 55
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.73 E-value=2.5e-16 Score=150.45 Aligned_cols=158 Identities=15% Similarity=0.177 Sum_probs=118.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCC---CeEEEEcCChh-----hhhhcCcC-------------CCc-cccChHHHh
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIP---AQIIASAPSER-----FKLHWPEP-------------MDF-ALNDNHRII 122 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~---~~V~v~~r~~e-----~~~~l~~~-------------~g~-~~~s~~e~~ 122 (341)
|||+|||+|+||++++..|.++|..++ ++|++|+|+++ +.+.+.+. .++ .+.++.+++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAA 88 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHHH
Confidence 689999999999999999999882111 48999999987 66655421 123 446777888
Q ss_pred hcCCEEEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCCCH-----HHH----HHhccccCCCCCCCCeEEEEcCCc
Q psy316 123 KEAEYVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL-----ETL----KKKLSVLVPNPNDAPTIIRVMPNT 193 (341)
Q Consensus 123 ~~aDvIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~-----~~l----~~~l~~~~~~~~~~~~vvr~mpn~ 193 (341)
.++|+||+|||++.+.++++++ .+.+ +++++||++++|++. +.+ .+.++ . .. .++.+|+.
T Consensus 89 ~~aD~Vilav~~~~~~~v~~~i-~~~l--~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~------~-~~-~v~~gp~~ 157 (354)
T 1x0v_A 89 EDADILIFVVPHQFIGKICDQL-KGHL--KANATGISLIKGVDEGPNGLKLISEVIGERLG------I-PM-SVLMGANI 157 (354)
T ss_dssp TTCSEEEECCCGGGHHHHHHHH-TTCS--CTTCEEEECCCCBCSSSSSCCBHHHHHHHHHT------C-CE-EEEECSCC
T ss_pred cCCCEEEEeCCHHHHHHHHHHH-HhhC--CCCCEEEEECCccCCCCCccccHHHHHHHHcC------C-CE-EEEECCCc
Confidence 9999999999999999999999 9888 889999999998863 223 33333 1 13 67899999
Q ss_pred hhhhcCce-EEEEeCCCCCccHHHHHHHHHHHHhcCCeEEcCCC
Q psy316 194 AMKYGKGI-TGMCHDVHLDKESEHLNMAIKIMEQGGIVEIIPES 236 (341)
Q Consensus 194 p~~v~~g~-~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~ 236 (341)
+..+..|. +.++.+. .++ +..+.++++|+..|..+++.++
T Consensus 158 a~~v~~g~~~~~~~~~-~~~--~~~~~v~~ll~~~g~~~~~~~d 198 (354)
T 1x0v_A 158 ASEVADEKFCETTIGC-KDP--AQGQLLKELMQTPNFRITVVQE 198 (354)
T ss_dssp HHHHHTTCCEEEEEEC-SSH--HHHHHHHHHHCBTTEEEEEESC
T ss_pred HHHHHhcCCceEEEEE-CCH--HHHHHHHHHhCCCCEEEEEcCC
Confidence 88776664 3333332 334 7788999999999987776554
No 56
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.72 E-value=1.1e-16 Score=159.65 Aligned_cols=194 Identities=11% Similarity=0.073 Sum_probs=140.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC-------c-cccChHHHhhc---CCEEEEeeC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD-------F-ALNDNHRIIKE---AEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g-------~-~~~s~~e~~~~---aDvIilaV~ 133 (341)
|||+|||+|+||++++.+|.++|+ +|++|+|++++++.+.++.| + .+.++++++.. +|+||+|||
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~----~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp 77 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGF----KVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQ 77 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC----CEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecC
Confidence 589999999999999999999995 89999999999888776445 5 56788888774 999999999
Q ss_pred h-HHHHHHHHHhhhcccccCCCcEEEEecCCCCH--HHHHHhccccCCCCCCCCeEEEEcCC--chhhhcCceEEEEeCC
Q psy316 134 P-QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL--ETLKKKLSVLVPNPNDAPTIIRVMPN--TAMKYGKGITGMCHDV 208 (341)
Q Consensus 134 ~-~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~--~~l~~~l~~~~~~~~~~~~vvr~mpn--~p~~v~~g~~~l~~~~ 208 (341)
+ +.++++++++ .+.+ .++++||++.++... ..+.+.++. .+.. ++. +|. .+.....|.+++..+
T Consensus 78 ~~~~v~~vl~~l-~~~l--~~g~iIId~sng~~~~~~~l~~~l~~-----~g~~-~v~-~pv~gg~~~a~~g~~i~~gg- 146 (478)
T 1pgj_A 78 AGAATDSTIEQL-KKVF--EKGDILVDTGNAHFKDQGRRAQQLEA-----AGLR-FLG-MGISGGEEGARKGPAFFPGG- 146 (478)
T ss_dssp CSHHHHHHHHHH-HHHC--CTTCEEEECCCCCHHHHHHHHHHHHT-----TTCE-EEE-EEEESHHHHHHHCCEEEEEE-
T ss_pred ChHHHHHHHHHH-HhhC--CCCCEEEECCCCChHHHHHHHHHHHH-----CCCe-EEE-eeccCCHHHHhcCCeEeccC-
Confidence 8 5899999999 8888 889999999888753 455555652 2223 332 232 233334555555544
Q ss_pred CCCccHHHHHHHHHHHHhcCCe--------EEcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHH
Q psy316 209 HLDKESEHLNMAIKIMEQGGIV--------EIIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQGIPRDMALRIG 277 (341)
Q Consensus 209 ~~~~~~~~~~~v~~ll~~lG~~--------~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~Gl~~~~a~~lv 277 (341)
++ +..+.++++|+.+|.. .++++........+.. +.+.+.++..+.|+ +.+.|++.+++.+++
T Consensus 147 --~~--~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~--N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~ 220 (478)
T 1pgj_A 147 --TL--SVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYH--NSGEYAILQIWGEVFDILRAMGLNNDEVAAVL 220 (478)
T ss_dssp --CH--HHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred --CH--HHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 24 7889999999999975 3445544444444433 34445555555554 458999999988887
Q ss_pred HH
Q psy316 278 AQ 279 (341)
Q Consensus 278 ~~ 279 (341)
..
T Consensus 221 ~~ 222 (478)
T 1pgj_A 221 ED 222 (478)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 57
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.72 E-value=1.2e-16 Score=159.52 Aligned_cols=194 Identities=12% Similarity=0.042 Sum_probs=142.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCc-C---CCc-cccChHHHhh---cCCEEEEeeCh-H
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPE-P---MDF-ALNDNHRIIK---EAEYVFLAMKP-Q 135 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~-~---~g~-~~~s~~e~~~---~aDvIilaV~~-~ 135 (341)
|||+|||+|+||++|+.+|.++|+ +|++|+|++++++.+.+ + .|+ .+.+++++++ ++|+||+|||+ +
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~----~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~ 78 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF----VVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQ 78 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC----CEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChH
Confidence 689999999999999999999995 89999999999888765 2 366 6778888774 89999999998 4
Q ss_pred HHHHHHHHhhhcccccCCCcEEEEecCCCCH--HHHHHhccccCCCCCCCCeEEEEcCC--chhhhcCceEEEEeCCCCC
Q psy316 136 YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL--ETLKKKLSVLVPNPNDAPTIIRVMPN--TAMKYGKGITGMCHDVHLD 211 (341)
Q Consensus 136 ~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~--~~l~~~l~~~~~~~~~~~~vvr~mpn--~p~~v~~g~~~l~~~~~~~ 211 (341)
.+++++.++ .+.+ .++++||++.++... ..+.+.+.. .+.. ++ .+|. .+...+.|.+++..++
T Consensus 79 ~v~~vl~~l-~~~l--~~g~iII~~s~~~~~~~~~l~~~l~~-----~g~~-~v-~~pv~g~~~~a~~g~~i~~gg~--- 145 (482)
T 2pgd_A 79 AVDNFIEKL-VPLL--DIGDIIIDGGNSEYRDTMRRCRDLKD-----KGIL-FV-GSGVSGGEDGARYGPSLMPGGN--- 145 (482)
T ss_dssp HHHHHHHHH-HHHC--CTTCEEEECSCCCHHHHHHHHHHHHH-----TTCE-EE-EEEEESHHHHHHHCCEEEEEEC---
T ss_pred HHHHHHHHH-Hhhc--CCCCEEEECCCCCHHHHHHHHHHHHH-----cCCe-Ee-CCCCCCChhhhccCCeEEeCCC---
Confidence 899999999 8888 889999999888764 345555542 2233 33 3343 3444456666655553
Q ss_pred ccHHHHHHHHHHHHhcCCeE--------EcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHHc-CCCHHHHHHHHHH
Q psy316 212 KESEHLNMAIKIMEQGGIVE--------IIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVKQ-GIPRDMALRIGAQ 279 (341)
Q Consensus 212 ~~~~~~~~v~~ll~~lG~~~--------~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~~-Gl~~~~a~~lv~~ 279 (341)
+ +..+.++++|+.+|..+ ++++........+.. +.+.+.++..+.|+ +.+. |++.+++.+++..
T Consensus 146 ~--e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~--N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~~ 221 (482)
T 2pgd_A 146 K--EAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVH--NGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEE 221 (482)
T ss_dssp T--TTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred H--HHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHH
Confidence 4 67889999999999754 334444444444433 34556666777776 5677 9999998888753
No 58
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.72 E-value=5.7e-16 Score=154.12 Aligned_cols=195 Identities=12% Similarity=0.075 Sum_probs=138.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC--CC--c-cccChHHHhh---cCCEEEEeeCh-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP--MD--F-ALNDNHRIIK---EAEYVFLAMKP- 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~--~g--~-~~~s~~e~~~---~aDvIilaV~~- 134 (341)
+|+|||||+|+||.+|+++|.++|+ +|++|||++++++.+.++ .+ + .+.+++++++ .+|+||+|||+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~----~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~ 79 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF----VVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAG 79 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC----CEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCCh
Confidence 3689999999999999999999995 999999999999887653 12 2 3578888876 59999999998
Q ss_pred HHHHHHHHHhhhcccccCCCcEEEEecCCCCHH--HHHHhccccCCCCCCCCeEEEE-cCCchhhhcCceEEEEeCCCCC
Q psy316 135 QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLE--TLKKKLSVLVPNPNDAPTIIRV-MPNTAMKYGKGITGMCHDVHLD 211 (341)
Q Consensus 135 ~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~--~l~~~l~~~~~~~~~~~~vvr~-mpn~p~~v~~g~~~l~~~~~~~ 211 (341)
+.+++++.++ .+.+ .++++||++.++.... .+.+.+.. .+.. ++.+ +...+.....|.+++..++
T Consensus 80 ~~v~~vl~~l-~~~L--~~g~iIId~st~~~~~t~~~~~~l~~-----~Gi~-fvd~pVsGg~~gA~~G~~im~GG~--- 147 (484)
T 4gwg_A 80 QAVDDFIEKL-VPLL--DTGDIIIDGGNSEYRDTTRRCRDLKA-----KGIL-FVGSGVSGGEEGARYGPSLMPGGN--- 147 (484)
T ss_dssp HHHHHHHHHH-GGGC--CTTCEEEECSCCCHHHHHHHHHHHHH-----TTCE-EEEEEEESHHHHHHHCCEEEEEEC---
T ss_pred HHHHHHHHHH-HHhc--CCCCEEEEcCCCCchHHHHHHHHHHh-----hccc-cccCCccCCHHHHhcCCeeecCCC---
Confidence 5899999999 9999 8999999987665432 33333331 2333 3432 1122333334566666653
Q ss_pred ccHHHHHHHHHHHHhcCCeE--------EcCCCchhHHHHHhcchHHHHHHHHHHHHHH---HHH-cCCCHHHHHHHHH
Q psy316 212 KESEHLNMAIKIMEQGGIVE--------IIPESMMNSFGAIAGSGCAYLFLVMDAMADG---AVK-QGIPRDMALRIGA 278 (341)
Q Consensus 212 ~~~~~~~~v~~ll~~lG~~~--------~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~~~-~Gl~~~~a~~lv~ 278 (341)
+ +.++.++++|+.+|..+ ++++........+.. +.+.+..+.++.|+ +.+ .|++.++..+++.
T Consensus 148 ~--ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~--N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~ 222 (484)
T 4gwg_A 148 K--EAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVH--NGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFE 222 (484)
T ss_dssp G--GGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred H--HHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 4 78999999999998643 445544444455443 34555666666665 346 8999999888764
No 59
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.55 E-value=5.1e-19 Score=156.98 Aligned_cols=146 Identities=13% Similarity=0.185 Sum_probs=115.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHH
Q psy316 62 PMWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 62 ~m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~v 140 (341)
.+.|||+|||+|+||++++++|.+.|+ +|++|+|+++ .+.+.. .|+ .. ++.+++..+|+||+|||+++++++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~----~V~~~~r~~~-~~~~~~-~g~~~~-~~~~~~~~aDvVilav~~~~~~~v 89 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGY----SVVFGSRNPQ-VSSLLP-RGAEVL-CYSEAASRSDVIVLAVHREHYDFL 89 (201)
Confidence 366899999999999999999999884 8999999977 555554 466 44 777888999999999999988888
Q ss_pred HHHhhhcccccCCCcEEEEecCCCCH--------HHHHHhccccCCCCCCCCeEEEEcCCchhhhcC-ce-----EEEEe
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVGVDL--------ETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGK-GI-----TGMCH 206 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~agi~~--------~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~-g~-----~~l~~ 206 (341)
+ ++ .+. .++++||++++|++. +.+++.++ +.+ ++|.|||+++...+ |. +.++.
T Consensus 90 ~-~l-~~~---~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~-------~~~-vvra~~n~~a~~~~~g~l~g~~~~~~~ 156 (201)
T 2yjz_A 90 A-EL-ADS---LKGRVLIDVSNNQKMNQYPESNAEYLAQLVP-------GAH-VVKAFNTISAWALQSGTLDASRQVFVC 156 (201)
Confidence 7 56 554 468899999999963 56666666 357 99999999988765 54 13444
Q ss_pred CCCCCccHHHHHHHHHHHHhcCCeE
Q psy316 207 DVHLDKESEHLNMAIKIMEQGGIVE 231 (341)
Q Consensus 207 ~~~~~~~~~~~~~v~~ll~~lG~~~ 231 (341)
+. ++ ++++.++++|+.+|...
T Consensus 157 g~--~~--~~~~~v~~ll~~~G~~~ 177 (201)
T 2yjz_A 157 GN--DS--KAKDRVMDIARTLGLTP 177 (201)
Confidence 43 24 78899999999999864
No 60
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.70 E-value=2.4e-16 Score=149.14 Aligned_cols=158 Identities=14% Similarity=0.138 Sum_probs=120.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcC--ChhhhhhcCcCCC-----------c-ccc--ChHHHhhcCCEE
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAP--SERFKLHWPEPMD-----------F-ALN--DNHRIIKEAEYV 128 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r--~~e~~~~l~~~~g-----------~-~~~--s~~e~~~~aDvI 128 (341)
|||+|||+|+||++++..|.++|+ +|++|+| ++++++.+.+. + + ... ++.+++.++|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~----~V~~~~r~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~v 75 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGN----EVRIWGTEFDTEILKSISAG-REHPRLGVKLNGVEIFWPEQLEKCLENAEVV 75 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCC----EEEEECCGGGHHHHHHHHTT-CCBTTTTBCCCSEEEECGGGHHHHHTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC----eEEEEEccCCHHHHHHHHHh-CcCcccCccccceEEecHHhHHHHHhcCCEE
Confidence 589999999999999999999984 9999999 99888877663 3 1 233 566778899999
Q ss_pred EEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCC------CHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCce-
Q psy316 129 FLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGV------DLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGI- 201 (341)
Q Consensus 129 ilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi------~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~- 201 (341)
|+|||++.+.+++.++ .+ + +++++||++++|+ +.+.+.+.++..++. .... .++.+|+.+...+.|.
T Consensus 76 i~~v~~~~~~~v~~~i-~~-l--~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~-~~~~-~~~~~p~~~~~~~~g~~ 149 (335)
T 1txg_A 76 LLGVSTDGVLPVMSRI-LP-Y--LKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDL-RERT-VAITGPAIAREVAKRMP 149 (335)
T ss_dssp EECSCGGGHHHHHHHH-TT-T--CCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTC-GGGE-EEEESSCCHHHHHTTCC
T ss_pred EEcCChHHHHHHHHHH-hc-C--CCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCC-CCcE-EEEECCCcHHHHHccCC
Confidence 9999999999999999 88 8 8899999999898 346677776631110 0012 5688899887776554
Q ss_pred EEEEeCCCCCccHHHHHHHHHHHHhcCCeEEcCCC
Q psy316 202 TGMCHDVHLDKESEHLNMAIKIMEQGGIVEIIPES 236 (341)
Q Consensus 202 ~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~ 236 (341)
+.++.+. .++ +..+.++++|+..|..+++.++
T Consensus 150 ~~~~~~~-~~~--~~~~~~~~ll~~~g~~~~~~~d 181 (335)
T 1txg_A 150 TTVVFSS-PSE--SSANKMKEIFETEYFGVEVTTD 181 (335)
T ss_dssp EEEEEEC-SCH--HHHHHHHHHHCBTTEEEEEESC
T ss_pred cEEEEEe-CCH--HHHHHHHHHhCCCcEEEEecCc
Confidence 3333332 235 7788999999999987666444
No 61
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.68 E-value=8e-16 Score=153.36 Aligned_cols=152 Identities=12% Similarity=0.116 Sum_probs=122.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC----------CC-------------c-cccChHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP----------MD-------------F-ALNDNHR 120 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~----------~g-------------~-~~~s~~e 120 (341)
+||+|||+|+||.+||..|+++|+ +|++|||++++++.+.+. .| + .+.+. +
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~----~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 80 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGH----QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDI-H 80 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC----CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCG-G
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC----eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCH-H
Confidence 589999999999999999999995 999999999987764321 12 1 23444 4
Q ss_pred HhhcCCEEEEeeChH--HHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhc
Q psy316 121 IIKEAEYVFLAMKPQ--YLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYG 198 (341)
Q Consensus 121 ~~~~aDvIilaV~~~--~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~ 198 (341)
.+++||+||+|||++ ..++++.++ .+.+ +++++|+|.+++++++.+.+.+. ...+ ++..+|..|..+.
T Consensus 81 ~~~~aDlVIeAVpe~~~vk~~v~~~l-~~~~--~~~~IlasntSti~i~~ia~~~~------~p~~-~ig~hf~~Pa~v~ 150 (483)
T 3mog_A 81 ALAAADLVIEAASERLEVKKALFAQL-AEVC--PPQTLLTTNTSSISITAIAAEIK------NPER-VAGLHFFNPAPVM 150 (483)
T ss_dssp GGGGCSEEEECCCCCHHHHHHHHHHH-HHHS--CTTCEEEECCSSSCHHHHTTTSS------SGGG-EEEEEECSSTTTC
T ss_pred HhcCCCEEEEcCCCcHHHHHHHHHHH-HHhh--ccCcEEEecCCCCCHHHHHHHcc------Cccc-eEEeeecChhhhC
Confidence 688999999999975 446788888 8888 88999999999999998887776 3457 8999998887765
Q ss_pred CceEEEEeCCCCCccHHHHHHHHHHHHhcCCeE-EcC
Q psy316 199 KGITGMCHDVHLDKESEHLNMAIKIMEQGGIVE-IIP 234 (341)
Q Consensus 199 ~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~-~v~ 234 (341)
. .+.++.+...++ +..+.+.++++.+|+.. ++.
T Consensus 151 ~-Lvevv~g~~Ts~--e~~~~~~~l~~~lGk~~v~v~ 184 (483)
T 3mog_A 151 K-LVEVVSGLATAA--EVVEQLCELTLSWGKQPVRCH 184 (483)
T ss_dssp C-EEEEEECSSCCH--HHHHHHHHHHHHTTCEEEEEE
T ss_pred C-eEEEecCCCCCH--HHHHHHHHHHHHhCCEEEEEe
Confidence 4 556777776777 89999999999999864 454
No 62
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.66 E-value=3e-15 Score=140.02 Aligned_cols=188 Identities=12% Similarity=0.115 Sum_probs=133.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC------Cc-cccChHHHhhcCCEEEEeeChH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM------DF-ALNDNHRIIKEAEYVFLAMKPQ 135 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~------g~-~~~s~~e~~~~aDvIilaV~~~ 135 (341)
--+||+|||+|.||..||..|+ +|+ +|++|||++++++++.+.+ ++ .+.++.+ +++||+||.|+|.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~----~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~ 84 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH----EVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFED 84 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS----EEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC----EEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCC
Confidence 3579999999999999999999 995 9999999999888765521 45 4566665 88999999999964
Q ss_pred -HHHH-HHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCceEEEEeCCCCCcc
Q psy316 136 -YLDS-AIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGITGMCHDVHLDKE 213 (341)
Q Consensus 136 -~v~~-vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l~~~~~~~~~ 213 (341)
+++. ++.++ .+. +++++++.+++++++.+.+.+. ...+ ++..++-.|...+. ...++.+...++
T Consensus 85 ~~vk~~l~~~l-~~~----~~~IlasntSti~~~~~a~~~~------~~~r-~~G~Hf~~Pv~~~~-lveiv~g~~t~~- 150 (293)
T 1zej_A 85 LNTKVEVLREV-ERL----TNAPLCSNTSVISVDDIAERLD------SPSR-FLGVHWMNPPHVMP-LVEIVISRFTDS- 150 (293)
T ss_dssp HHHHHHHHHHH-HTT----CCSCEEECCSSSCHHHHHTTSS------CGGG-EEEEEECSSTTTCC-EEEEEECTTCCH-
T ss_pred HHHHHHHHHHH-hcC----CCCEEEEECCCcCHHHHHHHhh------cccc-eEeEEecCccccCC-EEEEECCCCCCH-
Confidence 4554 44556 432 6778888888899998887665 2345 66666544654433 455667766677
Q ss_pred HHHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q psy316 214 SEHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGAQLL 281 (341)
Q Consensus 214 ~~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~~~~ 281 (341)
+.++.+.++++.+|+.+ ++++. -.+. ..++..+.|++.- +.+ |+++++..+++..++
T Consensus 151 -~~~~~~~~l~~~lGk~~v~v~d~--fi~N------rll~~~~~EA~~l-~~~-Gv~~e~id~~~~~g~ 208 (293)
T 1zej_A 151 -KTVAFVEGFLRELGKEVVVCKGQ--SLVN------RFNAAVLSEASRM-IEE-GVRAEDVDRVWKHHL 208 (293)
T ss_dssp -HHHHHHHHHHHHTTCEEEEEESS--CHHH------HHHHHHHHHHHHH-HHH-TCCHHHHHHHHHTTH
T ss_pred -HHHHHHHHHHHHcCCeEEEeccc--ccHH------HHHHHHHHHHHHH-HHh-CCCHHHHHHHHHhcC
Confidence 99999999999999864 55543 1111 1223345556553 234 889998888876543
No 63
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.66 E-value=1.4e-14 Score=143.04 Aligned_cols=189 Identities=11% Similarity=0.068 Sum_probs=137.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhh--------hcCcCCC-------------c-cccChHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKL--------HWPEPMD-------------F-ALNDNHRI 121 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~--------~l~~~~g-------------~-~~~s~~e~ 121 (341)
.+||+|||+|.||..||..|+++|+ +|++||+++++.. .+.++ | + .+.+. +.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~----~V~l~D~~~e~a~~~i~~~l~~~~~~-G~l~~~~~~~~~~~i~~t~dl-~a 127 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGI----ETFLVVRNEQRCKQELEVMYAREKSF-KRLNDKRIEKINANLKITSDF-HK 127 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHHHHHHHHHHT-TSCCHHHHHHHHTTEEEESCG-GG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----eEEEEECcHHHHHHHHHHHHHHHHHc-CCCCHHHHHHHhcceEEeCCH-HH
Confidence 3689999999999999999999995 9999999988432 22221 2 2 24455 46
Q ss_pred hhcCCEEEEeeCh--HHHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcC
Q psy316 122 IKEAEYVFLAMKP--QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGK 199 (341)
Q Consensus 122 ~~~aDvIilaV~~--~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~ 199 (341)
+++||+||+|||. ...++++.++ .+.+ +++++|+|.++++++..+.+.+. ...+ ++..+|..|.....
T Consensus 128 l~~aDlVIeAVpe~~~vk~~v~~~l-~~~~--~~~aIlasnTSsl~i~~ia~~~~------~p~r-~iG~HffnPv~~m~ 197 (460)
T 3k6j_A 128 LSNCDLIVESVIEDMKLKKELFANL-ENIC--KSTCIFGTNTSSLDLNEISSVLR------DPSN-LVGIHFFNPANVIR 197 (460)
T ss_dssp CTTCSEEEECCCSCHHHHHHHHHHH-HTTS--CTTCEEEECCSSSCHHHHHTTSS------SGGG-EEEEECCSSTTTCC
T ss_pred HccCCEEEEcCCCCHHHHHHHHHHH-HhhC--CCCCEEEecCCChhHHHHHHhcc------CCcc-eEEEEecchhhhCC
Confidence 8899999999985 3456788888 8888 89999999999999999988776 3457 88999887877654
Q ss_pred ceEEEEeCCCCCccHHHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q psy316 200 GITGMCHDVHLDKESEHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRIGA 278 (341)
Q Consensus 200 g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~lv~ 278 (341)
. ..++.+...++ +.++.+.++++.+|+.. ++.+. -..+. . ..++.++.|++.. +.+.|+++++..+++.
T Consensus 198 L-vEIv~g~~Ts~--e~~~~~~~l~~~lGk~~v~v~d~-pGfi~--N---ril~~~~~EA~~l-~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 198 L-VEIIYGSHTSS--QAIATAFQACESIKKLPVLVGNC-KSFVF--N---RLLHVYFDQSQKL-MYEYGYLPHQIDKIIT 267 (460)
T ss_dssp E-EEEECCSSCCH--HHHHHHHHHHHHTTCEEEEESSC-CHHHH--H---HHHHHHHHHHHHH-HHTSCCCHHHHHHHHH
T ss_pred E-EEEEeCCCCCH--HHHHHHHHHHHHhCCEEEEEecc-cHHHH--H---HHHHHHHHHHHHH-HHHcCCCHHHHHHHHH
Confidence 3 44566666677 99999999999999975 45532 11110 0 1122234444432 3478999988877765
No 64
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.65 E-value=8.8e-16 Score=145.19 Aligned_cols=169 Identities=19% Similarity=0.220 Sum_probs=122.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--------------cccChHHHhhcCCEE
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--------------ALNDNHRIIKEAEYV 128 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--------------~~~s~~e~~~~aDvI 128 (341)
.+|||+|||+|+||++++..|.++|+ +|++| +++++++.++++ |. .+.+. +.+..+|+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~----~V~l~-~~~~~~~~i~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~v 90 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH----EVILI-ARPQHVQAIEAT-GLRLETQSFDEQVKVSASSDP-SAVQGADLV 90 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC----EEEEE-CCHHHHHHHHHH-CEEEECSSCEEEECCEEESCG-GGGTTCSEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC----eEEEE-EcHhHHHHHHhC-CeEEEcCCCcEEEeeeeeCCH-HHcCCCCEE
Confidence 46899999999999999999999994 99999 888888877652 32 23344 346889999
Q ss_pred EEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCCCH-HHHHHhcc-ccCCCCCCCCeEEEEcCCchhhhcCceEEEEe
Q psy316 129 FLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL-ETLKKKLS-VLVPNPNDAPTIIRVMPNTAMKYGKGITGMCH 206 (341)
Q Consensus 129 ilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~-~~l~~~l~-~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l~~ 206 (341)
|+|||+++++++++++ ++.+ .++++||++.+|+.. +.+.+.++ ..++...... ..+..|+....++.|...+
T Consensus 91 ilavk~~~~~~~l~~l-~~~l--~~~~~iv~~~nGi~~~~~l~~~~~~~vl~g~~~~~-a~~~gP~~~~~~~~g~~~i-- 164 (318)
T 3hwr_A 91 LFCVKSTDTQSAALAM-KPAL--AKSALVLSLQNGVENADTLRSLLEQEVAAAVVYVA-TEMAGPGHVRHHGRGELVI-- 164 (318)
T ss_dssp EECCCGGGHHHHHHHH-TTTS--CTTCEEEEECSSSSHHHHHHHHCCSEEEEEEEEEE-EEEEETTEEEEEEEEEEEE--
T ss_pred EEEcccccHHHHHHHH-HHhc--CCCCEEEEeCCCCCcHHHHHHHcCCcEEEEEEEEe-EEEcCCeEEEEcCCceEEE--
Confidence 9999999999999999 9999 889999999999997 66777774 1110000001 2345577766666665443
Q ss_pred CCCCCccHHHHHHHHHHHHhcCCeEEcCCC-------------chhHHHHHhcchH
Q psy316 207 DVHLDKESEHLNMAIKIMEQGGIVEIIPES-------------MMNSFGAIAGSGC 249 (341)
Q Consensus 207 ~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~-------------~~d~~~al~g~gp 249 (341)
+. . +..+.+.++|+..|..++++++ .++.++++.++..
T Consensus 165 g~---~--~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~ 215 (318)
T 3hwr_A 165 EP---T--SHGANLAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPY 215 (318)
T ss_dssp CC---C--TTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCH
T ss_pred cC---C--HHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCH
Confidence 32 2 4456789999999988777654 2456677776644
No 65
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.65 E-value=2.1e-15 Score=142.53 Aligned_cols=166 Identities=16% Similarity=0.179 Sum_probs=117.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC--------CC------c-cccChHHHhhcCCE
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP--------MD------F-ALNDNHRIIKEAEY 127 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~--------~g------~-~~~s~~e~~~~aDv 127 (341)
|+|||+|||+|+||++++..|.++|+ +|++|+|++. +.+++. +| + .+.+++++.+.+|+
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~----~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~Dl 74 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTGH----CVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDC 74 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTTC----EEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC----eEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCE
Confidence 67899999999999999999999984 9999999862 433321 12 2 23455555558999
Q ss_pred EEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCCC-HHHHHHhccccCCCCCCCCeEEEEcCCc------hhhh---
Q psy316 128 VFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVD-LETLKKKLSVLVPNPNDAPTIIRVMPNT------AMKY--- 197 (341)
Q Consensus 128 IilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~-~~~l~~~l~~~~~~~~~~~~vvr~mpn~------p~~v--- 197 (341)
||+|||++++.++++++ ++.+ .++++||++.+|+. .+.+++.++ . .+ ++...... |..+
T Consensus 75 VilavK~~~~~~~l~~l-~~~l--~~~t~Iv~~~nGi~~~~~l~~~~~------~-~~-vl~g~~~~~a~~~~pg~v~~~ 143 (320)
T 3i83_A 75 TLLCIKVVEGADRVGLL-RDAV--APDTGIVLISNGIDIEPEVAAAFP------D-NE-VISGLAFIGVTRTAPGEIWHQ 143 (320)
T ss_dssp EEECCCCCTTCCHHHHH-TTSC--CTTCEEEEECSSSSCSHHHHHHST------T-SC-EEEEEEEEEEEEEETTEEEEE
T ss_pred EEEecCCCChHHHHHHH-Hhhc--CCCCEEEEeCCCCChHHHHHHHCC------C-Cc-EEEEEEEeceEEcCCCEEEEC
Confidence 99999999999999999 9999 88899999999998 578888887 2 34 44432211 1222
Q ss_pred cCceEEEEeCCCCCccHHHHHHHHHHHHhcCCeEEcCCC-------------chhHHHHHhcc
Q psy316 198 GKGITGMCHDVHLDKESEHLNMAIKIMEQGGIVEIIPES-------------MMNSFGAIAGS 247 (341)
Q Consensus 198 ~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~-------------~~d~~~al~g~ 247 (341)
+.|.+.+..-+.... +..+.+.++|+..|..++++++ .++.++++.++
T Consensus 144 ~~~~~~ig~~~~~~~--~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~ 204 (320)
T 3i83_A 144 AYGRLMLGNYPGGVS--ERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGG 204 (320)
T ss_dssp EEEEEEEEESSSCCC--HHHHHHHHHHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEecCCCCcc--HHHHHHHHHHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCC
Confidence 223333332222234 7788899999999988777654 13456777765
No 66
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.64 E-value=7.8e-15 Score=139.54 Aligned_cols=165 Identities=16% Similarity=0.244 Sum_probs=118.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-c-------------ccChHHHhhcCCEEE
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-A-------------LNDNHRIIKEAEYVF 129 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~-------------~~s~~e~~~~aDvIi 129 (341)
.|||+|||+|+||++++..|.++|+ +|++|+|+ ++.+.+++ .|+ . ..+.++ +..+|+||
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~----~V~~~~r~-~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vi 75 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE----AINVLARG-ATLQALQT-AGLRLTEDGATHTLPVRATHDAAA-LGEQDVVI 75 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC----CEEEECCH-HHHHHHHH-TCEEEEETTEEEEECCEEESCHHH-HCCCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC----EEEEEECh-HHHHHHHH-CCCEEecCCCeEEEeeeEECCHHH-cCCCCEEE
Confidence 3789999999999999999999994 99999996 56666654 343 1 234444 68899999
Q ss_pred EeeChHHHHHHHHHhhhcccccCCCcEEEEecCCCC--------------------HHHHHHhccccCCCCCCCCeEE--
Q psy316 130 LAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVD--------------------LETLKKKLSVLVPNPNDAPTII-- 187 (341)
Q Consensus 130 laV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~--------------------~~~l~~~l~~~~~~~~~~~~vv-- 187 (341)
+|||++++.++++++ .+.+ .++++||++.+|++ .+.+.+.++. .+ ++
T Consensus 76 lavk~~~~~~~~~~l-~~~l--~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~-------~~-v~~g 144 (335)
T 3ghy_A 76 VAVKAPALESVAAGI-APLI--GPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPT-------RH-VLGC 144 (335)
T ss_dssp ECCCHHHHHHHHGGG-SSSC--CTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCG-------GG-EEEE
T ss_pred EeCCchhHHHHHHHH-HhhC--CCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCc-------cc-EEEE
Confidence 999999999999999 9999 88999999999963 2366777762 23 33
Q ss_pred -------EEcCCchhhhcCceEEEEeCCCCCccHHHHHHHHHHHHhcCCeEEcCCC-------------chhHHHHHhcc
Q psy316 188 -------RVMPNTAMKYGKGITGMCHDVHLDKESEHLNMAIKIMEQGGIVEIIPES-------------MMNSFGAIAGS 247 (341)
Q Consensus 188 -------r~mpn~p~~v~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~-------------~~d~~~al~g~ 247 (341)
+..|+.....+.|.+.+..-+.... +..+.+.++|+..|..++++++ .++.++++.++
T Consensus 145 v~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~--~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~ 222 (335)
T 3ghy_A 145 VVHLTCATVSPGHIRHGNGRRLILGEPAGGAS--PRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGA 222 (335)
T ss_dssp EECCCEEESSTTEEEECSCCEEEEECTTCSCC--HHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCC
T ss_pred EEEEEEEEcCCcEEEECCCCeEEEecCCCCcC--HHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCC
Confidence 2234443344455444432222234 6778899999999988776544 24566677665
Q ss_pred h
Q psy316 248 G 248 (341)
Q Consensus 248 g 248 (341)
.
T Consensus 223 ~ 223 (335)
T 3ghy_A 223 T 223 (335)
T ss_dssp C
T ss_pred C
Confidence 3
No 67
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.60 E-value=5.8e-15 Score=131.92 Aligned_cols=150 Identities=14% Similarity=0.212 Sum_probs=110.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
+.|||+|||+|+||+++++.|.+.|+ +|++++|++++++.+.+. |+ .. +..++++++|+||+|+|++.+.+++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~----~V~~~~r~~~~~~~~~~~-g~~~~-~~~~~~~~~DvVi~av~~~~~~~v~ 100 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGF----KVVVGSRNPKRTARLFPS-AAQVT-FQEEAVSSPEVIFVAVFREHYSSLC 100 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTC----CEEEEESSHHHHHHHSBT-TSEEE-EHHHHTTSCSEEEECSCGGGSGGGG
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHc-CCcee-cHHHHHhCCCEEEECCChHHHHHHH
Confidence 34789999999999999999999984 899999999998888774 77 44 7778889999999999998877776
Q ss_pred HHhhhcccccCCCcEEEEecCCCCHHHHH----------HhccccCCCCCCCCeEEEEcCCchhhh-cC----ce-EEEE
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGVDLETLK----------KKLSVLVPNPNDAPTIIRVMPNTAMKY-GK----GI-TGMC 205 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi~~~~l~----------~~l~~~~~~~~~~~~vvr~mpn~p~~v-~~----g~-~~l~ 205 (341)
. + .+.+ ++++||++++|++.+.++ +.++ +.+ +++.|....... .. |. ..+.
T Consensus 101 ~-l-~~~~---~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~-------~~~-vv~~~n~~~~~~~~~~~~~g~~~~~~ 167 (215)
T 2vns_A 101 S-L-SDQL---AGKILVDVSNPTEQEHLQHRESNAEYLASLFP-------TCT-VVKAFNVISAWTLQAGPRDGNRQVPI 167 (215)
T ss_dssp G-G-HHHH---TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT-------TSE-EEEECTTBCHHHHHTCSCSSCCEEEE
T ss_pred H-H-HHhc---CCCEEEEeCCCcccccccccccHHHHHHHHCC-------CCe-EEeccccccHhHhcccccCCceeEEE
Confidence 5 6 6655 688999999999876553 4444 356 888873221110 11 21 2233
Q ss_pred eCCCCCccHHHHHHHHHHHHhcCCeE-EcCC
Q psy316 206 HDVHLDKESEHLNMAIKIMEQGGIVE-IIPE 235 (341)
Q Consensus 206 ~~~~~~~~~~~~~~v~~ll~~lG~~~-~v~e 235 (341)
.+. ++ +..+.++++|+.+|..+ ++++
T Consensus 168 ~g~--~~--~~~~~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 168 CGD--QP--EAKRAVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp EES--CH--HHHHHHHHHHHHTTCEEEECCS
T ss_pred ecC--CH--HHHHHHHHHHHHcCCceEeecc
Confidence 332 34 88899999999999865 4554
No 68
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.60 E-value=1.3e-14 Score=143.39 Aligned_cols=199 Identities=13% Similarity=0.078 Sum_probs=130.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC-------------------CCc-cccChHHHh
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP-------------------MDF-ALNDNHRII 122 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~-------------------~g~-~~~s~~e~~ 122 (341)
|+|||+|||+|.||.++|..|.++|+ +|++|||++++++.+++. .++ .+++..+++
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G~----~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~ 76 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELGA----NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAV 76 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcCC----EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHH
Confidence 56899999999999999999999995 999999999988877541 123 456778889
Q ss_pred hcCCEEEEeeChH----------HHHHHHHHhhhcccccCCCcEEEEecCCCCHH---HHHHhccccC-CCCCCCCeEEE
Q psy316 123 KEAEYVFLAMKPQ----------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDLE---TLKKKLSVLV-PNPNDAPTIIR 188 (341)
Q Consensus 123 ~~aDvIilaV~~~----------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~---~l~~~l~~~~-~~~~~~~~vvr 188 (341)
++||+||+|||.. .++++++++ .+++ +++++||+.+ ++++. .+.+.+.... ..+....+.+.
T Consensus 77 ~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i-~~~l--~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v~ 152 (450)
T 3gg2_A 77 PEADIIFIAVGTPAGEDGSADMSYVLDAARSI-GRAM--SRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDIA 152 (450)
T ss_dssp GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHH-HHHC--CSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred hcCCEEEEEcCCCcccCCCcChHHHHHHHHHH-HhhC--CCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeEE
Confidence 9999999999865 899999999 8888 8898988775 45543 3333221100 00001121233
Q ss_pred EcCCchhhhcCce---------EEEEeCCCCCccHHHHHHHHHHHHhcCC---eEEcCCCchhHHHHHhcchHHHHHHHH
Q psy316 189 VMPNTAMKYGKGI---------TGMCHDVHLDKESEHLNMAIKIMEQGGI---VEIIPESMMNSFGAIAGSGCAYLFLVM 256 (341)
Q Consensus 189 ~mpn~p~~v~~g~---------~~l~~~~~~~~~~~~~~~v~~ll~~lG~---~~~v~e~~~d~~~al~g~gpa~~~~~~ 256 (341)
..|.. ...|. .++..+. ++ +..+.++++|+.++. .+.++...-..++.+.. +.+.+..+
T Consensus 153 ~~Pe~---a~eG~~~~~~~~p~~ivvG~~--~~--~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~--N~~~a~~i 223 (450)
T 3gg2_A 153 SNPEF---LKEGNAIDDFMKPDRVVVGVD--SD--RARELITSLYKPMLLNNFRVLFMDIASAEMTKYAA--NAMLATRI 223 (450)
T ss_dssp ECCCC---CCTTSHHHHHHSCSCEEEEES--SH--HHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHH--HHHHHHHH
T ss_pred echhh---hcccchhhhccCCCEEEEEcC--CH--HHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHH--HHHHHHHH
Confidence 33432 22221 3444442 24 788999999999986 45444322233344432 44555554
Q ss_pred HHHHH---HHHHcCCCHHHHHHHHH
Q psy316 257 DAMAD---GAVKQGIPRDMALRIGA 278 (341)
Q Consensus 257 eal~e---a~~~~Gl~~~~a~~lv~ 278 (341)
..+.| -+.+.|++.++..+++.
T Consensus 224 a~~nE~~~l~~~~Gid~~~v~~~~~ 248 (450)
T 3gg2_A 224 SFMNDVANLCERVGADVSMVRLGIG 248 (450)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHc
Confidence 44444 46789999998887765
No 69
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.60 E-value=5.2e-15 Score=133.56 Aligned_cols=151 Identities=12% Similarity=0.091 Sum_probs=113.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
..|||+|||+|+||++|++.|.++|+ +|++|+|. + + +.++| |+|||++.+.+++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~----~V~~~~~~--------~----------~-~~~aD--ilavP~~ai~~vl~ 59 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGH----YVTVLHAP--------E----------D-IRDFE--LVVIDAHGVEGYVE 59 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTC----EEEECSSG--------G----------G-GGGCS--EEEECSSCHHHHHH
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCC----EEEEecCH--------H----------H-hccCC--EEEEcHHHHHHHHH
Confidence 35799999999999999999999995 99999983 1 1 45789 99999999999999
Q ss_pred HhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCceEEEEeCCCCCccHHHHHHHHH
Q psy316 143 GLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGITGMCHDVHLDKESEHLNMAIK 222 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l~~~~~~~~~~~~~~~v~~ 222 (341)
++ .+.+ +++++|+++++.++.+.++...+ .+.. ++..+|.. ....++... ++ +..+.+++
T Consensus 60 ~l-~~~l--~~g~ivvd~sgs~~~~vl~~~~~------~g~~-fvg~HPm~-----g~~~~i~a~---d~--~a~~~l~~ 119 (232)
T 3dfu_A 60 KL-SAFA--RRGQMFLHTSLTHGITVMDPLET------SGGI-VMSAHPIG-----QDRWVASAL---DE--LGETIVGL 119 (232)
T ss_dssp HH-HTTC--CTTCEEEECCSSCCGGGGHHHHH------TTCE-EEEEEEEE-----TTEEEEEES---SH--HHHHHHHH
T ss_pred HH-HHhc--CCCCEEEEECCcCHHHHHHHHHh------CCCc-EEEeeeCC-----CCceeeeCC---CH--HHHHHHHH
Confidence 99 8888 89999999987777766665544 3445 66666652 123344443 24 68899999
Q ss_pred HHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHH
Q psy316 223 IMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDA 258 (341)
Q Consensus 223 ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~ea 258 (341)
|++.+|..+ +++++.++.+.|...+.|..+....++
T Consensus 120 L~~~lG~~vv~~~~~~hd~~~AAvsh~nhLv~L~~~A 156 (232)
T 3dfu_A 120 LVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDA 156 (232)
T ss_dssp HHHHTTCEECCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEEeCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999865 468888887766655656555444333
No 70
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.60 E-value=9.4e-15 Score=130.02 Aligned_cols=135 Identities=13% Similarity=0.205 Sum_probs=103.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
..|||+|||+|+||++++..|.++|+ +|++|+|+++ .++++|+||+|||++.++++++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~----~V~~~~~~~~------------------~~~~aD~vi~av~~~~~~~v~~ 75 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGH----EVTYYGSKDQ------------------ATTLGEIVIMAVPYPALAALAK 75 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC----EEEEECTTCC------------------CSSCCSEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC----EEEEEcCCHH------------------HhccCCEEEEcCCcHHHHHHHH
Confidence 35799999999999999999999984 9999999865 2457999999999999999999
Q ss_pred HhhhcccccCCCcEEEEecCCCC---------------HHHHHHhccccCCCCCCCCeEEEE-----cCCchhhhcCc--
Q psy316 143 GLVNDKVTLNSSRCIISMLVGVD---------------LETLKKKLSVLVPNPNDAPTIIRV-----MPNTAMKYGKG-- 200 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~~agi~---------------~~~l~~~l~~~~~~~~~~~~vvr~-----mpn~p~~v~~g-- 200 (341)
++ .+.+ + +++||++++|++ .+.+++.++ +.+ +++. +|+.+.....+
T Consensus 76 ~l-~~~~--~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-------~~~-vv~~~~~~~~p~~~~~~~~g~~ 143 (209)
T 2raf_A 76 QY-ATQL--K-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-------DSQ-VLKAFNTTFAATLQSGQVNGKE 143 (209)
T ss_dssp HT-HHHH--T-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-------TSE-EEECSTTSCHHHHHHSEETTTE
T ss_pred HH-HHhc--C-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-------CCc-EEEeeecccHhhccccccCCCC
Confidence 99 8888 6 899999999886 466777776 356 7774 56655544333
Q ss_pred e-EEEEeCCCCCccHHHHHHHHHHHHhcCCe-EEcCC
Q psy316 201 I-TGMCHDVHLDKESEHLNMAIKIMEQGGIV-EIIPE 235 (341)
Q Consensus 201 ~-~~l~~~~~~~~~~~~~~~v~~ll~~lG~~-~~v~e 235 (341)
. .+++.++ ++ +..+.++++|+.+|.. +++++
T Consensus 144 ~~~~~~~g~--~~--~~~~~v~~ll~~~G~~~~~~~~ 176 (209)
T 2raf_A 144 PTTVLVAGN--DD--SAKQRFTRALADSPLEVKDAGK 176 (209)
T ss_dssp ECEEEEEES--CH--HHHHHHHHHTTTSSCEEEEEES
T ss_pred CceeEEcCC--CH--HHHHHHHHHHHHcCCceEeCCC
Confidence 2 3334432 34 7889999999999965 44554
No 71
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.59 E-value=1.3e-14 Score=136.41 Aligned_cols=164 Identities=13% Similarity=0.109 Sum_probs=112.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccC----------hHHHhhcCCEEEEe
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALND----------NHRIIKEAEYVFLA 131 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s----------~~e~~~~aDvIila 131 (341)
|+|||+|||+|+||++++..|. +| ++|++|+|++++++.+++ .|+ ...+ ..+....+|+||+|
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g----~~V~~~~r~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~~~~D~vila 74 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LY----HDVTVVTRRQEQAAAIQS-EGIRLYKGGEEFRADCSADTSINSDFDLLVVT 74 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TT----SEEEEECSCHHHHHHHHH-HCEEEEETTEEEEECCEEESSCCSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cC----CceEEEECCHHHHHHHHh-CCceEecCCCeecccccccccccCCCCEEEEE
Confidence 6789999999999999999999 88 499999999988888766 365 2211 12346789999999
Q ss_pred eChHHHHHHHHHhhhcccccCCCcEEEEecCCCCHH-HHHHhccccCCCCCCCCeEEEEcCC---------chhhhcCce
Q psy316 132 MKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLE-TLKKKLSVLVPNPNDAPTIIRVMPN---------TAMKYGKGI 201 (341)
Q Consensus 132 V~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~-~l~~~l~~~~~~~~~~~~vvr~mpn---------~p~~v~~g~ 201 (341)
||++++.++++++ ++ + .+++ ||++.+|+..+ .++++++ ..+ ++..+.. .-...+.|.
T Consensus 75 vK~~~~~~~l~~l-~~-~--~~~~-ivs~~nGi~~~e~l~~~~~-------~~~-vl~g~~~~~a~~~~pg~v~~~~~g~ 141 (307)
T 3ego_A 75 VKQHQLQSVFSSL-ER-I--GKTN-ILFLQNGMGHIHDLKDWHV-------GHS-IYVGIVEHGAVRKSDTAVDHTGLGA 141 (307)
T ss_dssp CCGGGHHHHHHHT-TS-S--CCCE-EEECCSSSHHHHHHHTCCC-------SCE-EEEEEECCEEEECSSSEEEEEECCC
T ss_pred eCHHHHHHHHHHh-hc-C--CCCe-EEEecCCccHHHHHHHhCC-------CCc-EEEEEEeeceEECCCCEEEEeeeee
Confidence 9999999999998 76 4 4566 99999999974 6777766 234 4443322 212223444
Q ss_pred EEEEeCCCCCccHHHHHHHHHHHHhcCCeEEcCCC-------------chhHHHHHhcch
Q psy316 202 TGMCHDVHLDKESEHLNMAIKIMEQGGIVEIIPES-------------MMNSFGAIAGSG 248 (341)
Q Consensus 202 ~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~-------------~~d~~~al~g~g 248 (341)
+.+..-+.. . +....+..+|+..|..+.++++ .++.++++.++.
T Consensus 142 ~~iG~~~~~-~--~~~~~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~ 198 (307)
T 3ego_A 142 IKWSAFDDA-E--PDRLNILFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVK 198 (307)
T ss_dssp EEEEECTTC-C--GGGGTTTTSSCCTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCCCC-c--HHHHHHHHHhhhCCCCcEechhHHHHHHHHHHHhhhhhHHHHHhcCC
Confidence 444332221 2 4445566667777777777654 256677777653
No 72
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.59 E-value=6.1e-14 Score=145.99 Aligned_cols=187 Identities=10% Similarity=0.038 Sum_probs=134.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhc-----------CcCCC-------------c-cccCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHW-----------PEPMD-------------F-ALNDN 118 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l-----------~~~~g-------------~-~~~s~ 118 (341)
.+||+|||+|.||..||..|.++|+ +|++||+++++++.. .+ .| + .+.+.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~----~V~l~D~~~~~~~~~~~~i~~~l~~~~~-~G~~~~~~~~~~~~~i~~~~d~ 388 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGT----PILMKDINEHGIEQGLAEAAKLLVGRVD-KGRMTPAKMAEVLNGIRPTLSY 388 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTC----CEEEECSSHHHHHHHHHHHHHHHHHHHT-TTSSCHHHHHHHHHHEEEESSS
T ss_pred CCEEEEECCChhhHHHHHHHHhCCC----EEEEEECCHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHhcCeEEECCH
Confidence 4689999999999999999999995 999999999887652 12 12 2 33455
Q ss_pred HHHhhcCCEEEEeeChH--HHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhh
Q psy316 119 HRIIKEAEYVFLAMKPQ--YLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMK 196 (341)
Q Consensus 119 ~e~~~~aDvIilaV~~~--~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~ 196 (341)
+.+++||+||+|||.+ ..++++.++ .+++ +++++|+|.++++++..+.+.+. ...+ ++..++..|..
T Consensus 389 -~~~~~aDlVIeaV~e~~~vk~~v~~~l-~~~~--~~~~IlasntStl~i~~la~~~~------~~~~-~ig~hf~~P~~ 457 (715)
T 1wdk_A 389 -GDFGNVDLVVEAVVENPKVKQAVLAEV-ENHV--REDAILASNTSTISISLLAKALK------RPEN-FVGMHFFNPVH 457 (715)
T ss_dssp -TTGGGCSEEEECCCSCHHHHHHHHHHH-HTTS--CTTCEEEECCSSSCHHHHGGGCS------CGGG-EEEEECCSSTT
T ss_pred -HHHCCCCEEEEcCCCCHHHHHHHHHHH-HhhC--CCCeEEEeCCCCCCHHHHHHHhc------Cccc-eEEEEccCCcc
Confidence 6788999999999954 356788888 8888 88899999999999998887765 3456 78888877776
Q ss_pred hcCceEEEEeCCCCCccHHHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q psy316 197 YGKGITGMCHDVHLDKESEHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALR 275 (341)
Q Consensus 197 v~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~ 275 (341)
....+ .++.++..++ +.++.+.++++.+|+.. ++.+. -.. ..+ ..+..++.|++.- ...|++.++..+
T Consensus 458 ~~~lv-evv~g~~t~~--e~~~~~~~l~~~lGk~~v~v~d~-~Gf----i~N-ril~~~~~Ea~~l--~~~G~~~~~id~ 526 (715)
T 1wdk_A 458 MMPLV-EVIRGEKSSD--LAVATTVAYAKKMGKNPIVVNDC-PGF----LVN-RVLFPYFGGFAKL--VSAGVDFVRIDK 526 (715)
T ss_dssp TCCEE-EEEECSSCCH--HHHHHHHHHHHHTTCEEEEEESC-TTT----THH-HHHHHHHHHHHHH--HHTTCCHHHHHH
T ss_pred cCceE-EEEECCCCCH--HHHHHHHHHHHHhCCEeEEEcCC-CCh----hhh-HHHHHHHHHHHHH--HHCCCCHHHHHH
Confidence 55433 4456666667 89999999999999864 45432 111 110 1122334444322 245899887776
Q ss_pred HH
Q psy316 276 IG 277 (341)
Q Consensus 276 lv 277 (341)
++
T Consensus 527 ~~ 528 (715)
T 1wdk_A 527 VM 528 (715)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 73
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.56 E-value=1.5e-14 Score=135.16 Aligned_cols=150 Identities=11% Similarity=0.055 Sum_probs=105.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc----cccChHHHh-hcCCEEEEeeChHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF----ALNDNHRII-KEAEYVFLAMKPQYL 137 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~----~~~s~~e~~-~~aDvIilaV~~~~v 137 (341)
|+|||+|||+|+||++++..|.++|+ +|++|+|+++.++.... .|. ...++.+.+ ..+|+||+|||++++
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g~----~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~D~vilavk~~~~ 75 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSLP----HTTLIGRHAKTITYYTV-PHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQL 75 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHCT----TCEEEESSCEEEEEESS-TTSCCEEEEEEEGGGCCSCEEEEEECSCGGGH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCC----eEEEEEeccCcEEEEec-CCeeccceecCchHhcCCCCCEEEEeCCccCH
Confidence 67899999999999999999999984 89999999776654332 342 223444544 789999999999999
Q ss_pred HHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCC------chhhhcCceEEEEeCCCCC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPN------TAMKYGKGITGMCHDVHLD 211 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn------~p~~v~~g~~~l~~~~~~~ 211 (341)
.++++++ ++.+ .++++||++.+|+..++. ++ ..+ ++..... .|..+..+...+..+.
T Consensus 76 ~~~l~~l-~~~l--~~~~~iv~~~nGi~~~~~---~~-------~~~-v~~g~~~~~a~~~~pg~v~~~~~~~~~~~--- 138 (294)
T 3g17_A 76 DAVIPHL-TYLA--HEDTLIILAQNGYGQLEH---IP-------FKN-VCQAVVYISGQKKGDVVTHFRDYQLRIQD--- 138 (294)
T ss_dssp HHHGGGH-HHHE--EEEEEEEECCSSCCCGGG---CC-------CSC-EEECEEEEEEEEETTEEEEEEEEEEEEEC---
T ss_pred HHHHHHH-HHhh--CCCCEEEEeccCcccHhh---CC-------CCc-EEEEEEEEEEEEcCCCEEEECCCEEecCc---
Confidence 9999999 9988 788899999999997654 55 123 3322111 1111111111222222
Q ss_pred ccHHHHHHHHHHHHhcCCeEEcCCC
Q psy316 212 KESEHLNMAIKIMEQGGIVEIIPES 236 (341)
Q Consensus 212 ~~~~~~~~v~~ll~~lG~~~~v~e~ 236 (341)
. +..+.+.++|+..|..++++++
T Consensus 139 ~--~~~~~l~~~l~~~~~~~~~~~d 161 (294)
T 3g17_A 139 N--ALTRQFRDLVQDSQIDIVLEAN 161 (294)
T ss_dssp S--HHHHHHHHHTTTSSCEEEEESS
T ss_pred c--HHHHHHHHHHHhCCCceEEChH
Confidence 3 6678889999998988777654
No 74
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.55 E-value=2.8e-13 Score=134.39 Aligned_cols=154 Identities=10% Similarity=0.159 Sum_probs=116.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCc---------------------CCCc-cccChHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPE---------------------PMDF-ALNDNHRI 121 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~---------------------~~g~-~~~s~~e~ 121 (341)
.+||+|||+|.||..||..|.++|+ +|++|||++++++.+.+ .... .+.+. +.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~----~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~ 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI----SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KE 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC----EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GG
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC----eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HH
Confidence 3689999999999999999999995 99999999987665322 0011 33454 56
Q ss_pred hhcCCEEEEeeChH--HHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcC
Q psy316 122 IKEAEYVFLAMKPQ--YLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGK 199 (341)
Q Consensus 122 ~~~aDvIilaV~~~--~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~ 199 (341)
+.+||+||+|||.+ ...+++.++ .+.+ +++++|+|.++++++..+.+.+. ...+ ++..++..|.....
T Consensus 112 ~~~aDlVIeaVpe~~~~k~~v~~~l-~~~~--~~~~ii~snTs~~~~~~la~~~~------~~~~-~ig~hf~~P~~~~~ 181 (463)
T 1zcj_A 112 LSTVDLVVEAVFEDMNLKKKVFAEL-SALC--KPGAFLCTNTSALNVDDIASSTD------RPQL-VIGTHFFSPAHVMR 181 (463)
T ss_dssp GTTCSEEEECCCSCHHHHHHHHHHH-HHHS--CTTCEEEECCSSSCHHHHHTTSS------CGGG-EEEEEECSSTTTCC
T ss_pred HCCCCEEEEcCCCCHHHHHHHHHHH-HhhC--CCCeEEEeCCCCcCHHHHHHHhc------CCcc-eEEeecCCCcccce
Confidence 88999999999864 346788888 8888 88999999888888888887665 3456 77777655654433
Q ss_pred ceEEEEeCCCCCccHHHHHHHHHHHHhcCCeE-EcCC
Q psy316 200 GITGMCHDVHLDKESEHLNMAIKIMEQGGIVE-IIPE 235 (341)
Q Consensus 200 g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~-~v~e 235 (341)
...++.++..++ +.++.+.++++.+|+.. ++.+
T Consensus 182 -lvevv~g~~t~~--e~~~~~~~l~~~lGk~~v~v~~ 215 (463)
T 1zcj_A 182 -LLEVIPSRYSSP--TTIATVMSLSKKIGKIGVVVGN 215 (463)
T ss_dssp -EEEEEECSSCCH--HHHHHHHHHHHHTTCEEEEBCC
T ss_pred -eEEEeCCCCCCH--HHHHHHHHHHHHhCCEEEEECC
Confidence 344566666677 89999999999999864 4543
No 75
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.53 E-value=6.2e-13 Score=131.17 Aligned_cols=197 Identities=14% Similarity=0.171 Sum_probs=131.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC------------------C-c-cccChHHHh
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM------------------D-F-ALNDNHRII 122 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~------------------g-~-~~~s~~e~~ 122 (341)
-..+|+|||+|.||.++|..|.++|+ +|++|||++++.+.+++.. + + .+++..+++
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~----~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~ 82 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGH----EVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGV 82 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHH
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHH
Confidence 46789999999999999999999995 9999999999999887631 2 3 457788899
Q ss_pred hcCCEEEEeeChH-----------HHHHHHHHhhhcccccCCCcEEEEecCCCCHHH---HHHhccccCCCCCCCCeEEE
Q psy316 123 KEAEYVFLAMKPQ-----------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDLET---LKKKLSVLVPNPNDAPTIIR 188 (341)
Q Consensus 123 ~~aDvIilaV~~~-----------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~---l~~~l~~~~~~~~~~~~vvr 188 (341)
++||+||+|||.. .++++++++ .+++ +++++||..+ ++++.+ +.+.+....+. .+. .+.
T Consensus 83 ~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i-~~~l--~~g~iVV~~S-Tv~pgtt~~l~~~l~e~~~~-~d~--~v~ 155 (446)
T 4a7p_A 83 KDADAVFIAVGTPSRRGDGHADLSYVFAAAREI-AENL--TKPSVIVTKS-TVPVGTGDEVERIIAEVAPN-SGA--KVV 155 (446)
T ss_dssp TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHH-HHSC--CSCCEEEECS-CCCTTHHHHHHHHHHHHSTT-SCC--EEE
T ss_pred hcCCEEEEEcCCCCccccCCccHHHHHHHHHHH-HHhc--CCCCEEEEeC-CCCchHHHHHHHHHHHhCCC-CCc--eEE
Confidence 9999999998632 599999999 8888 8899999864 666533 33322210000 112 333
Q ss_pred EcCCchhhhcCce---------EEEEeCCCCCccHHHHHHHHHHHHhcCCe----EEcCCCchhHHHHHhcchHHHHHHH
Q psy316 189 VMPNTAMKYGKGI---------TGMCHDVHLDKESEHLNMAIKIMEQGGIV----EIIPESMMNSFGAIAGSGCAYLFLV 255 (341)
Q Consensus 189 ~mpn~p~~v~~g~---------~~l~~~~~~~~~~~~~~~v~~ll~~lG~~----~~v~e~~~d~~~al~g~gpa~~~~~ 255 (341)
..|.. ...|. .++..++ ++ +..+.++++|+.++.. +.++.-.-..++.+.. ++|.+..
T Consensus 156 ~~Pe~---a~eG~a~~d~~~p~~ivvG~~--~~--~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~--N~~~a~~ 226 (446)
T 4a7p_A 156 SNPEF---LREGAAIEDFKRPDRVVVGTE--DE--FARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAA--NAFLAVK 226 (446)
T ss_dssp ECCCC---CCTTSHHHHHHSCSCEEEECS--CH--HHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHH--HHHHHHH
T ss_pred eCccc---ccccchhhhccCCCEEEEeCC--cH--HHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHH--HHHHHHH
Confidence 44432 22222 3455543 24 7788999999998863 4444322233334332 4555555
Q ss_pred HHHHHHH---HHHcCCCHHHHHHHHHH
Q psy316 256 MDAMADG---AVKQGIPRDMALRIGAQ 279 (341)
Q Consensus 256 ~eal~ea---~~~~Gl~~~~a~~lv~~ 279 (341)
+..+.|. +.+.|++.++..+++..
T Consensus 227 ia~~nE~~~l~~~~GiD~~~v~~~~~~ 253 (446)
T 4a7p_A 227 ITFINEIADLCEQVGADVQEVSRGIGM 253 (446)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 5555443 57999999988877653
No 76
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.53 E-value=8.8e-13 Score=129.28 Aligned_cols=186 Identities=14% Similarity=0.206 Sum_probs=126.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC-----------------CCc-cccChHHHhhcC
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP-----------------MDF-ALNDNHRIIKEA 125 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~-----------------~g~-~~~s~~e~~~~a 125 (341)
.|||+|||+|.||.++|..|.+ |+ +|++|||++++++.+++. .++ .++++.+++++|
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~----~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~a 110 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NH----EVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNA 110 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TS----EEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CC----eEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCC
Confidence 4699999999999999999887 84 999999999998877652 134 567778899999
Q ss_pred CEEEEeeChH-----------HHHHHHHHhhhcccccCCCcEEEEecCCCCH---HHHHHhccccCCCCCCCCeEEEEcC
Q psy316 126 EYVFLAMKPQ-----------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL---ETLKKKLSVLVPNPNDAPTIIRVMP 191 (341)
Q Consensus 126 DvIilaV~~~-----------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~---~~l~~~l~~~~~~~~~~~~vvr~mp 191 (341)
|+||+|||.. .++++++++ .+ + +++++||.. +++++ +.+.+.+. . .. + ..-|
T Consensus 111 DvViiaVPt~~~~~~~~~Dl~~V~~v~~~i-~~-l--~~g~iVV~~-STv~pgtt~~l~~~l~------~-~~-v-~~sP 176 (432)
T 3pid_A 111 DYVIIATPTDYDPKTNYFNTSTVEAVIRDV-TE-I--NPNAVMIIK-STIPVGFTRDIKERLG------I-DN-V-IFSP 176 (432)
T ss_dssp SEEEECCCCEEETTTTEEECHHHHHHHHHH-HH-H--CTTSEEEEC-SCCCTTHHHHHHHHHT------C-CC-E-EECC
T ss_pred CEEEEeCCCccccccccccHHHHHHHHHHH-Hh-c--CCCcEEEEe-CCCChHHHHHHHHHHh------h-cc-E-eecC
Confidence 9999999854 688899998 88 8 889988865 55664 44555554 1 23 3 2233
Q ss_pred CchhhhcCc---------eEEEEeCCCCCccHHHHHHHHHHHHh--cCC--eEEcCCCchhHHHHHhcchHHHHHHHHHH
Q psy316 192 NTAMKYGKG---------ITGMCHDVHLDKESEHLNMAIKIMEQ--GGI--VEIIPESMMNSFGAIAGSGCAYLFLVMDA 258 (341)
Q Consensus 192 n~p~~v~~g---------~~~l~~~~~~~~~~~~~~~v~~ll~~--lG~--~~~v~e~~~d~~~al~g~gpa~~~~~~ea 258 (341)
...+.| ..++..++ + +..+.+.++|.. ++. .+.+....-...+.+.. +.|.+.-+..
T Consensus 177 ---e~~~~G~A~~~~l~p~rIvvG~~---~--~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~--N~~~a~~Ia~ 246 (432)
T 3pid_A 177 ---EFLREGRALYDNLHPSRIVIGER---S--ARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFA--NTYLALRVAY 246 (432)
T ss_dssp ---CCCCTTSHHHHHHSCSCEEESSC---S--HHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHH--HHHHHHHHHH
T ss_pred ---ccCCcchhhhcccCCceEEecCC---H--HHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHH--HHHHHHHHHH
Confidence 222222 13455543 3 777888999976 442 34444322233344432 4555554444
Q ss_pred HHH---HHHHcCCCHHHHHHHHH
Q psy316 259 MAD---GAVKQGIPRDMALRIGA 278 (341)
Q Consensus 259 l~e---a~~~~Gl~~~~a~~lv~ 278 (341)
+.| .+.+.|++.++..+.+.
T Consensus 247 ~nEl~~lae~~GiD~~~v~~~~~ 269 (432)
T 3pid_A 247 FNELDSYAESQGLNSKQIIEGVC 269 (432)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHc
Confidence 444 36799999998877664
No 77
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.52 E-value=7.1e-13 Score=138.13 Aligned_cols=186 Identities=15% Similarity=0.128 Sum_probs=129.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhc-----------CcCCC-------------c-cccChH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHW-----------PEPMD-------------F-ALNDNH 119 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l-----------~~~~g-------------~-~~~s~~ 119 (341)
+||+|||+|.||..||..|.++|+ +|++|||++++++.. .+ .| + .+.+.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~----~V~l~D~~~~~~~~~~~~i~~~l~~~~~-~G~~~~~~~~~~~~~i~~~~d~- 386 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNY----PVILKEVNEKFLEAGIGRVKANLQSRVR-KGSMSQEKFEKTMSLLKGSLDY- 386 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTC----CEEEECSSHHHHHHHHHHHHHHHHHTTC-----CTTHHHHTTTSEEEESSS-
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCC----EEEEEECCHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHhcceEEeCCH-
Confidence 689999999999999999999995 999999999877643 11 12 2 23455
Q ss_pred HHhhcCCEEEEeeChHH--HHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhh
Q psy316 120 RIIKEAEYVFLAMKPQY--LDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKY 197 (341)
Q Consensus 120 e~~~~aDvIilaV~~~~--v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v 197 (341)
+.+++||+||+|||.+. .+.++.++ .+++ +++++|++.+++++++.+.+.+. ...+ ++..++-.|...
T Consensus 387 ~~~~~aDlVIeaVpe~~~vk~~v~~~l-~~~~--~~~~IlasntStl~i~~la~~~~------~p~~-~iG~hf~~P~~~ 456 (725)
T 2wtb_A 387 ESFRDVDMVIEAVIENISLKQQIFADL-EKYC--PQHCILASNTSTIDLNKIGERTK------SQDR-IVGAHFFSPAHI 456 (725)
T ss_dssp GGGTTCSEEEECCCSCHHHHHHHHHHH-HHHS--CTTCEEEECCSSSCHHHHTTTCS------CTTT-EEEEEECSSTTT
T ss_pred HHHCCCCEEEEcCcCCHHHHHHHHHHH-HhhC--CCCcEEEeCCCCCCHHHHHHHhc------CCCC-EEEecCCCCccc
Confidence 57889999999999653 45677888 8888 88889989889999988877665 3346 666665445543
Q ss_pred cCceEEEEeCCCCCccHHHHHHHHHHHHhcCCeE-EcCCCchhHHHHHhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q psy316 198 GKGITGMCHDVHLDKESEHLNMAIKIMEQGGIVE-IIPESMMNSFGAIAGSGCAYLFLVMDAMADGAVKQGIPRDMALRI 276 (341)
Q Consensus 198 ~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~-~v~e~~~d~~~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a~~l 276 (341)
.. ...++.++..++ +.++.+.++++.+|+.. ++.+. ...+ .+ ..+..++.|++.- .+.|++.++..++
T Consensus 457 ~~-lvevv~g~~t~~--e~~~~~~~l~~~lGk~~v~v~d~-~Gfi----~N-ril~~~~~Ea~~l--~~~G~~~e~id~~ 525 (725)
T 2wtb_A 457 MP-LLEIVRTNHTSA--QVIVDLLDVGKKIKKTPVVVGNC-TGFA----VN-RMFFPYTQAAMFL--VECGADPYLIDRA 525 (725)
T ss_dssp CC-EEEEEECSSCCH--HHHHHHHHHHHHTTCEEEEEESS-TTTT----HH-HHHHHHHHHHHHH--HHTTCCHHHHHHH
T ss_pred Cc-eEEEEECCCCCH--HHHHHHHHHHHHhCCEEEEECCC-ccHH----HH-HHHHHHHHHHHHH--HHCCCCHHHHHHH
Confidence 33 345566766677 89999999999999864 45432 1111 00 1122234444322 2458998887776
Q ss_pred H
Q psy316 277 G 277 (341)
Q Consensus 277 v 277 (341)
+
T Consensus 526 ~ 526 (725)
T 2wtb_A 526 I 526 (725)
T ss_dssp H
T ss_pred H
Confidence 6
No 78
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.52 E-value=9.5e-14 Score=136.77 Aligned_cols=197 Identities=9% Similarity=0.077 Sum_probs=125.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC------------------CC-c-cccChHHHhhc
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP------------------MD-F-ALNDNHRIIKE 124 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~------------------~g-~-~~~s~~e~~~~ 124 (341)
|||+|||+|.||..++..|.++|+ +|++|+|++++++.+++. .| + .+.+..+++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~----~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~ 76 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGH----EVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLD 76 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC----EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhcc
Confidence 589999999999999999999995 999999999998887652 23 4 45677778899
Q ss_pred CCEEEEeeChH-H---------HHHHHHHhhhcccccCC---CcEEEEecCCCCH----HHHHHhccccCCCCCCCCeEE
Q psy316 125 AEYVFLAMKPQ-Y---------LDSAIQGLVNDKVTLNS---SRCIISMLVGVDL----ETLKKKLSVLVPNPNDAPTII 187 (341)
Q Consensus 125 aDvIilaV~~~-~---------v~~vl~~i~~~~l~~~~---~~iIVs~~agi~~----~~l~~~l~~~~~~~~~~~~vv 187 (341)
+|+||+|||.. . ++++++++ .+.+ ++ +++||..+ ++.+ +.+.+.+....+...+..+.+
T Consensus 77 aDvviiaVptp~~~~~~~dl~~v~~v~~~i-~~~l--~~~~~~~iVV~~S-tv~~g~t~~~l~~~l~~~~g~~~~~~~~v 152 (436)
T 1mv8_A 77 SDVSFICVGTPSKKNGDLDLGYIETVCREI-GFAI--REKSERHTVVVRS-TVLPGTVNNVVIPLIEDCSGKKAGVDFGV 152 (436)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHHHHH-HHHH--TTCCSCCEEEECS-CCCTTHHHHTHHHHHHHHHSCCBTTTBEE
T ss_pred CCEEEEEcCCCcccCCCcchHHHHHHHHHH-HHHh--cccCCCcEEEEeC-CcCCCchHHHHHHHHHHhcCcccCCcEEE
Confidence 99999999854 3 89999999 8888 77 88888653 3332 334444431000000011022
Q ss_pred EEcCCchhhhcCce---------EEEEeCCCCCccHHHHHHHHHHHHhcCCeEEcCCCchhHHHHHhcchHHHHHH---H
Q psy316 188 RVMPNTAMKYGKGI---------TGMCHDVHLDKESEHLNMAIKIMEQGGIVEIIPESMMNSFGAIAGSGCAYLFL---V 255 (341)
Q Consensus 188 r~mpn~p~~v~~g~---------~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~~~d~~~al~g~gpa~~~~---~ 255 (341)
...|. ....|. .++..+. ++ +..+.++++++.+|..+++++-.......+. .++|.+. +
T Consensus 153 ~~~Pe---~~~~G~~~~~~~~~~~iv~G~~--~~--~~~~~~~~l~~~~~~~v~~~~~~~ae~~Kl~--~N~~~a~~ia~ 223 (436)
T 1mv8_A 153 GTNPE---FLRESTAIKDYDFPPMTVIGEL--DK--QTGDLLEEIYRELDAPIIRKTVEVAEMIKYT--CNVWHAAKVTF 223 (436)
T ss_dssp EECCC---CCCTTSHHHHHHSCSCEEEEES--SH--HHHHHHHHHHTTSSSCEEEEEHHHHHHHHHH--HHHHHHHHHHH
T ss_pred EECcc---cccccccchhccCCCEEEEEcC--CH--HHHHHHHHHHhccCCCEEcCCHHHHHHHHHH--HHHHHHHHHHH
Confidence 22332 222222 2333332 34 7788899999999986655332222333333 2344433 3
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHH
Q psy316 256 MDAMADGAVKQGIPRDMALRIGA 278 (341)
Q Consensus 256 ~eal~ea~~~~Gl~~~~a~~lv~ 278 (341)
+..+...+.+.|++.++..+++.
T Consensus 224 ~nE~~~l~~~~Gid~~~v~~~~~ 246 (436)
T 1mv8_A 224 ANEIGNIAKAVGVDGREVMDVIC 246 (436)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCHHHHHHHhc
Confidence 44445556789999887766554
No 79
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.47 E-value=1e-12 Score=130.46 Aligned_cols=201 Identities=12% Similarity=0.166 Sum_probs=124.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC------------------CCc-cccChHHHhhc
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP------------------MDF-ALNDNHRIIKE 124 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~------------------~g~-~~~s~~e~~~~ 124 (341)
+|||+|||+|.||..++..|.++|. .++|++|||++++++.+++. .++ .+.+..+++++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~--G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~ 82 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCP--EIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKE 82 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCT--TSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhc
Confidence 3799999999999999999999831 25999999999998886531 134 45677788899
Q ss_pred CCEEEEeeCh-HH--------------HHHHHHHhhhcccccCCCcEEEEecCCCC---HHHHHHhccccCCCCCCCCeE
Q psy316 125 AEYVFLAMKP-QY--------------LDSAIQGLVNDKVTLNSSRCIISMLVGVD---LETLKKKLSVLVPNPNDAPTI 186 (341)
Q Consensus 125 aDvIilaV~~-~~--------------v~~vl~~i~~~~l~~~~~~iIVs~~agi~---~~~l~~~l~~~~~~~~~~~~v 186 (341)
+|+||+|||. .. +.++++++ .+.+ +++++||..+ +++ .+.+.+.+...-. ... -
T Consensus 83 aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i-~~~l--~~g~iVV~~S-Tv~~g~~~~l~~~l~~~~~--~~~--d 154 (467)
T 2q3e_A 83 ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRI-VQNS--NGYKIVTEKS-TVPVRAAESIRRIFDANTK--PNL--N 154 (467)
T ss_dssp CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHH-HHTC--CSEEEEEECS-CCCTTHHHHHHHHHHHTCC--TTC--E
T ss_pred CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHH-HhhC--CCCCEEEECC-cCCchHHHHHHHHHHHhCC--CCC--C
Confidence 9999999973 32 57788888 8888 7888888663 333 2345554442000 001 1
Q ss_pred EEEcCCchhhhcCceE---------EEEeCCC--CCccHHHHHHHHHHHHhc-CC-eEEcCCCchhHHHHHhcchHHHHH
Q psy316 187 IRVMPNTAMKYGKGIT---------GMCHDVH--LDKESEHLNMAIKIMEQG-GI-VEIIPESMMNSFGAIAGSGCAYLF 253 (341)
Q Consensus 187 vr~mpn~p~~v~~g~~---------~l~~~~~--~~~~~~~~~~v~~ll~~l-G~-~~~v~e~~~d~~~al~g~gpa~~~ 253 (341)
+.++ ..|.....|.. ++..++. .++ +..+.++++++.+ |. .+++++........+.. +.+.+
T Consensus 155 ~~V~-~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~--~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~--N~~~a 229 (467)
T 2q3e_A 155 LQVL-SNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQ--RAVQALCAVYEHWVPREKILTTNTWSSELSKLAA--NAFLA 229 (467)
T ss_dssp EEEE-ECCCCCCTTSHHHHHHSCSCEEEECCSSHHHH--HHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHH--HHHHH
T ss_pred eEEE-eCHHHhhcccchhhccCCCEEEECCCCCCCCH--HHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHH--HHHHH
Confidence 1222 12333333432 4444421 134 7788999999998 64 45554322223333332 33433
Q ss_pred HHHHHH---HHHHHHcCCCHHHHHHHHHH
Q psy316 254 LVMDAM---ADGAVKQGIPRDMALRIGAQ 279 (341)
Q Consensus 254 ~~~eal---~ea~~~~Gl~~~~a~~lv~~ 279 (341)
..+..+ ...+.+.|++.++..+++..
T Consensus 230 ~~ia~~nE~~~l~~~~Gid~~~v~~~~~~ 258 (467)
T 2q3e_A 230 QRISSINSISALCEATGADVEEVATAIGM 258 (467)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHHcC
Confidence 333333 33467899999988776653
No 80
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.44 E-value=2.1e-12 Score=128.75 Aligned_cols=206 Identities=12% Similarity=0.145 Sum_probs=125.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC------------------Cc-cccChHHHhh
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM------------------DF-ALNDNHRIIK 123 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~------------------g~-~~~s~~e~~~ 123 (341)
|+|||+|||+|.||..+|..|.++|. .++|++|||++++++.+++.. ++ .+++..+++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~--g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~ 85 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCP--HITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIA 85 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCT--TSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhh
Confidence 35799999999999999999999831 259999999999998887520 13 3456667889
Q ss_pred cCCEEEEeeChH---------------HHHHHHHHhhhcccccCCCcEEEEecCCCCH---HHHHHhccccCCCCCCCCe
Q psy316 124 EAEYVFLAMKPQ---------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL---ETLKKKLSVLVPNPNDAPT 185 (341)
Q Consensus 124 ~aDvIilaV~~~---------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~---~~l~~~l~~~~~~~~~~~~ 185 (341)
++|+||+|||.. .+.++++++ .+++ +++++||..+ +++. +.+.+.+....+......+
T Consensus 86 ~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i-~~~l--~~g~iVV~~S-Tv~~gt~~~l~~~l~~~~~~~~~~d~ 161 (481)
T 2o3j_A 86 EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTI-AQYA--GGPKIVVEKS-TVPVKAAESIGCILREAQKNNENLKF 161 (481)
T ss_dssp HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHH-HHHC--CSCEEEEECS-CCCTTHHHHHHHHHHHHTC----CCE
T ss_pred cCCEEEEecCCccccccccccCCCcHHHHHHHHHHH-HHhC--CCCCEEEECC-CCCCCHHHHHHHHHHHhhCcCcCCce
Confidence 999999998742 388899998 8888 8888888653 4443 3444444310000001110
Q ss_pred EEEEcCCchhhhcCce---------EEEEeCCCCCccHHHHHHHHHHHHhcCC--eEEcCCCchhHHHHHhcchHHHHHH
Q psy316 186 IIRVMPNTAMKYGKGI---------TGMCHDVHLDKESEHLNMAIKIMEQGGI--VEIIPESMMNSFGAIAGSGCAYLFL 254 (341)
Q Consensus 186 vvr~mpn~p~~v~~g~---------~~l~~~~~~~~~~~~~~~v~~ll~~lG~--~~~v~e~~~d~~~al~g~gpa~~~~ 254 (341)
.+...|. ....|. .++..+.......+..+.++++|+.++. .+.++.-.-..+..+.. +.+.+.
T Consensus 162 ~v~~~Pe---~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~--N~~~a~ 236 (481)
T 2o3j_A 162 QVLSNPE---FLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVA--NAFLAQ 236 (481)
T ss_dssp EEEECCC---CCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHH--HHHHHH
T ss_pred EEEeCcc---cccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHH--HHHHHH
Confidence 1333342 112221 3444443211001456788999999985 44444322233344332 233333
Q ss_pred HH---HHHHHHHHHcCCCHHHHHHHHHH
Q psy316 255 VM---DAMADGAVKQGIPRDMALRIGAQ 279 (341)
Q Consensus 255 ~~---eal~ea~~~~Gl~~~~a~~lv~~ 279 (341)
.+ ..+...+.+.|++.++..+.+..
T Consensus 237 ~ia~~nE~~~la~~~Gid~~~v~~~~~~ 264 (481)
T 2o3j_A 237 RISSINSISAVCEATGAEISEVAHAVGY 264 (481)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHcc
Confidence 33 33344467899999988776653
No 81
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.42 E-value=4.9e-12 Score=125.90 Aligned_cols=200 Identities=13% Similarity=0.081 Sum_probs=125.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC------C-------------c-cccChHHHh
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM------D-------------F-ALNDNHRII 122 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~------g-------------~-~~~s~~e~~ 122 (341)
-.|||+|||+|.||..+|..|.++|+ +|++|||++++++.+++.. | + .+++..+++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~----~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~ 82 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGH----DVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAV 82 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCC----EEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHh
Confidence 56899999999999999999999995 9999999999988876531 2 2 345666788
Q ss_pred hcCCEEEEeeCh----------HHHHHHHHHhhhcccccCCCcEEEEecCCCCH---HHHHHhccccCCCCCC---CCeE
Q psy316 123 KEAEYVFLAMKP----------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL---ETLKKKLSVLVPNPND---APTI 186 (341)
Q Consensus 123 ~~aDvIilaV~~----------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~---~~l~~~l~~~~~~~~~---~~~v 186 (341)
.+||+||+|||. +.++++++++ .+++ +++++||..+ ++++ +.+.+.+....+ .+ ..+.
T Consensus 83 ~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i-~~~l--~~~~iVV~~S-Tv~~gt~~~l~~~l~~~~~--~g~~~~~~~ 156 (478)
T 2y0c_A 83 AHGDVQFIAVGTPPDEDGSADLQYVLAAARNI-GRYM--TGFKVIVDKS-TVPVGTAERVRAAVAEELA--KRGGDQMFS 156 (478)
T ss_dssp HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHH-HHHC--CSCEEEEECS-CCCTTHHHHHHHHHHHHHH--HTTCCCCEE
T ss_pred hcCCEEEEEeCCCcccCCCccHHHHHHHHHHH-HHhc--CCCCEEEEeC-CcCCCchHHHHHHHHHHhc--CCCCCccEE
Confidence 999999999986 8999999999 8888 8888888764 6654 333333321000 01 2212
Q ss_pred EEEcCCchhhhcCce---------EEEEeCCCCCccHHHHHHHHHHHHhcCC---eEEcCCCchhHHHHHhcchHHHHHH
Q psy316 187 IRVMPNTAMKYGKGI---------TGMCHDVHLDKESEHLNMAIKIMEQGGI---VEIIPESMMNSFGAIAGSGCAYLFL 254 (341)
Q Consensus 187 vr~mpn~p~~v~~g~---------~~l~~~~~~~~~~~~~~~v~~ll~~lG~---~~~v~e~~~d~~~al~g~gpa~~~~ 254 (341)
+-..|. ....|. .++..+.+.....+..+.+.++|+.++. .+.++.-.-..+..+.. +++.+.
T Consensus 157 v~~~Pe---~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~--N~~~a~ 231 (478)
T 2y0c_A 157 VVSNPE---FLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAA--NAMLAT 231 (478)
T ss_dssp EEECCC---CCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHH--HHHHHH
T ss_pred EEEChh---hhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHH--HHHHHH
Confidence 233332 222222 3444432110000456788999998774 44444322223333332 334433
Q ss_pred ---HHHHHHHHHHHcCCCHHHHHHHH
Q psy316 255 ---VMDAMADGAVKQGIPRDMALRIG 277 (341)
Q Consensus 255 ---~~eal~ea~~~~Gl~~~~a~~lv 277 (341)
++..+...+.+.|++.++..+.+
T Consensus 232 ~ia~~nE~~~la~~~Gid~~~v~~~i 257 (478)
T 2y0c_A 232 RISFMNELANLADRFGADIEAVRRGI 257 (478)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 33334445679999998766544
No 82
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.40 E-value=1.1e-11 Score=116.95 Aligned_cols=153 Identities=10% Similarity=0.058 Sum_probs=120.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcC-----------c------CC------C-c-cccCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWP-----------E------PM------D-F-ALNDN 118 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~-----------~------~~------g-~-~~~s~ 118 (341)
..||+|||+|.||+.||..++.+|+ +|+++|++++.+++.. + .. + + .+++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~----~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l 81 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF----RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNL 81 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC----CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC----eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccch
Confidence 4689999999999999999999995 9999999987654321 1 00 0 1 34566
Q ss_pred HHHhhcCCEEEEeeCh--HHHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhh
Q psy316 119 HRIIKEAEYVFLAMKP--QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMK 196 (341)
Q Consensus 119 ~e~~~~aDvIilaV~~--~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~ 196 (341)
.+++++||+|+-||+- ..-++++.++ ..++ +++.||.|.++++++..|.+.+. ...+ ++..||-.|..
T Consensus 82 ~~a~~~ad~ViEav~E~l~iK~~lf~~l-~~~~--~~~aIlaSNTSsl~is~ia~~~~------~p~r-~ig~HffNP~~ 151 (319)
T 3ado_A 82 AEAVEGVVHIQECVPENLDLKRKIFAQL-DSIV--DDRVVLSSSSSCLLPSKLFTGLA------HVKQ-CIVAHPVNPPY 151 (319)
T ss_dssp HHHTTTEEEEEECCCSCHHHHHHHHHHH-HTTC--CSSSEEEECCSSCCHHHHHTTCT------TGGG-EEEEEECSSTT
T ss_pred HhHhccCcEEeeccccHHHHHHHHHHHH-HHHh--hhcceeehhhhhccchhhhhhcc------CCCc-EEEecCCCCcc
Confidence 7889999999999984 4456788999 8888 89999999999999999998776 3567 88888766665
Q ss_pred hcCceEEEEeCCCCCccHHHHHHHHHHHHhcCCeE-Ec
Q psy316 197 YGKGITGMCHDVHLDKESEHLNMAIKIMEQGGIVE-II 233 (341)
Q Consensus 197 v~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~-~v 233 (341)
.-. ..=++.++..++ +..+.+..+++.+|+.. .+
T Consensus 152 ~m~-LVEiv~g~~Ts~--~~~~~~~~~~~~~gk~pv~v 186 (319)
T 3ado_A 152 YIP-LVELVPHPETSP--ATVDRTHALMRKIGQSPVRV 186 (319)
T ss_dssp TCC-EEEEEECTTCCH--HHHHHHHHHHHHTTCEEEEC
T ss_pred ccc-hHHhcCCCCCcH--HHHHHHHHHHHHhCCccCCc
Confidence 543 333567777777 99999999999999764 45
No 83
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.40 E-value=9.1e-12 Score=121.37 Aligned_cols=194 Identities=16% Similarity=0.138 Sum_probs=119.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC-----------------Cc-cccChHHHhhcCC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM-----------------DF-ALNDNHRIIKEAE 126 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~-----------------g~-~~~s~~e~~~~aD 126 (341)
|||+|||+|.||..++..|.+ |+ +|++|+|++++++.+++.. .+ .+.+..+.+.++|
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~----~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aD 75 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QN----EVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAE 75 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TS----EEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCS
T ss_pred CEEEEECCCHHHHHHHHHHhC-CC----EEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCC
Confidence 589999999999999999998 84 9999999999988876531 12 2345667888999
Q ss_pred EEEEeeChH-----------HHHHHHHHhhhcccccCCCcEEEE-ecCCCC-HHHHHHhccccCCCCCCCCeEEEEcCCc
Q psy316 127 YVFLAMKPQ-----------YLDSAIQGLVNDKVTLNSSRCIIS-MLVGVD-LETLKKKLSVLVPNPNDAPTIIRVMPNT 193 (341)
Q Consensus 127 vIilaV~~~-----------~v~~vl~~i~~~~l~~~~~~iIVs-~~agi~-~~~l~~~l~~~~~~~~~~~~vvr~mpn~ 193 (341)
+||+|||+. .+.++++++ .+ + +++++||. .+.+.. .+.+.+.++ .. . ++ ..|..
T Consensus 76 vviiavpt~~~~~~~~~dl~~v~~v~~~i-~~-l--~~~~iVV~~ST~~~g~~~~l~~~~~------~~-~-v~-~~Pe~ 142 (402)
T 1dlj_A 76 LVIIATPTNYNSRINYFDTQHVETVIKEV-LS-V--NSHATLIIKSTIPIGFITEMRQKFQ------TD-R-II-FSPEF 142 (402)
T ss_dssp EEEECCCCCEETTTTEECCHHHHHHHHHH-HH-H--CSSCEEEECSCCCTTHHHHHHHHTT------CS-C-EE-ECCCC
T ss_pred EEEEecCCCcccCCCCccHHHHHHHHHHH-Hh-h--CCCCEEEEeCCCCccHHHHHHHHhC------CC-e-EE-ECCcc
Confidence 999999976 599999999 88 8 88888885 334443 456666666 22 4 43 22321
Q ss_pred --hhhh----cCceEEEEeCCCCC--ccHHHHHHHHHHHHhcC-C---eEEcCCCchhHHHHHhcchHHHHHH---HHHH
Q psy316 194 --AMKY----GKGITGMCHDVHLD--KESEHLNMAIKIMEQGG-I---VEIIPESMMNSFGAIAGSGCAYLFL---VMDA 258 (341)
Q Consensus 194 --p~~v----~~g~~~l~~~~~~~--~~~~~~~~v~~ll~~lG-~---~~~v~e~~~d~~~al~g~gpa~~~~---~~ea 258 (341)
+... ...-.++..+.... +..+..+.+.++|...+ . .++.+.-.-..+..+.. +++.+. ++..
T Consensus 143 ~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~--N~~~a~~ia~~nE 220 (402)
T 1dlj_A 143 LRESKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFA--NTYLALRVAYFNE 220 (402)
T ss_dssp CCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred ccCcchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 1100 01112344443211 00134566788886532 2 34443322222333322 233332 2333
Q ss_pred HHHHHHHcCCCHHHHHHHHH
Q psy316 259 MADGAVKQGIPRDMALRIGA 278 (341)
Q Consensus 259 l~ea~~~~Gl~~~~a~~lv~ 278 (341)
+...+.+.|++.++..+.+.
T Consensus 221 ~~~l~~~~Gid~~~v~~~~~ 240 (402)
T 1dlj_A 221 LDTYAESRKLNSHMIIQGIS 240 (402)
T ss_dssp HHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHhc
Confidence 44456799999998877664
No 84
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.39 E-value=8.6e-12 Score=123.87 Aligned_cols=195 Identities=11% Similarity=0.057 Sum_probs=123.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhc-CCCCCC-eEEEEcCChh----hhhhcCcC--------------------CC-c-cc
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRT-GLCIPA-QIIASAPSER----FKLHWPEP--------------------MD-F-AL 115 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~-G~~~~~-~V~v~~r~~e----~~~~l~~~--------------------~g-~-~~ 115 (341)
.|||+|||+|.||..+|..|.++ | + +|++|||+++ +++.+++. .| + .+
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G----~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~t 93 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPC----FEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECT 93 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTT----CCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCC----CCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEe
Confidence 47999999999999999999999 8 6 9999999999 88777641 12 2 33
Q ss_pred cChHHHhhcCCEEEEeeChH------------HHHHHHHHhhhcccccCCCcEEEEecCCCCHH---HHH-----Hhccc
Q psy316 116 NDNHRIIKEAEYVFLAMKPQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDLE---TLK-----KKLSV 175 (341)
Q Consensus 116 ~s~~e~~~~aDvIilaV~~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~---~l~-----~~l~~ 175 (341)
++ .+++++||+||+|||.. .+..+++++ .+++ +++++||.. +++++. .+. +..+.
T Consensus 94 td-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i-~~~l--~~g~iVV~~-STv~pgtt~~v~~~ile~~~g~ 168 (478)
T 3g79_A 94 PD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNV-GKYL--KPGMLVVLE-STITPGTTEGMAKQILEEESGL 168 (478)
T ss_dssp SC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHH-HHHC--CTTCEEEEC-SCCCTTTTTTHHHHHHHHHHCC
T ss_pred Cc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHH-Hhhc--CCCcEEEEe-CCCChHHHHHHHHHHHHHhcCC
Confidence 44 67889999999999743 367777888 8888 889888865 455542 222 22220
Q ss_pred cCCCCCCCCeEEEEcCCc--hhhh----cCceEEEEeCCCCCccHHHHHHHHHHHHhc-CC-eEEcCCCchhHHHHHhcc
Q psy316 176 LVPNPNDAPTIIRVMPNT--AMKY----GKGITGMCHDVHLDKESEHLNMAIKIMEQG-GI-VEIIPESMMNSFGAIAGS 247 (341)
Q Consensus 176 ~~~~~~~~~~vvr~mpn~--p~~v----~~g~~~l~~~~~~~~~~~~~~~v~~ll~~l-G~-~~~v~e~~~d~~~al~g~ 247 (341)
..+..+.+-.-|.. +... ..-..++..++ + +..+.++++|+.+ +. .+.+++..-..++.++.
T Consensus 169 ----~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~---~--~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~- 238 (478)
T 3g79_A 169 ----KAGEDFALAHAPERVMVGRLLKNIREHDRIVGGID---E--ASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAE- 238 (478)
T ss_dssp ----CBTTTBEEEECCCCCCTTSHHHHHHHSCEEEEESS---H--HHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHH-
T ss_pred ----CcCCceeEEeCCccCCccchhhhhcCCcEEEEeCC---H--HHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHH-
Confidence 00112012223321 1111 01114444442 4 7779999999999 65 44454333333444432
Q ss_pred hHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHH
Q psy316 248 GCAYLFLVMDAMAD---GAVKQGIPRDMALRIGA 278 (341)
Q Consensus 248 gpa~~~~~~eal~e---a~~~~Gl~~~~a~~lv~ 278 (341)
+.|.+.-+..+.| .+.+.|++.++..+.+.
T Consensus 239 -N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~ 271 (478)
T 3g79_A 239 -NTFRDLQIAAINQLALYCEAMGINVYDVRTGVD 271 (478)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHC
Confidence 4555554444444 35699999998887665
No 85
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.35 E-value=2.8e-11 Score=117.03 Aligned_cols=160 Identities=15% Similarity=0.106 Sum_probs=110.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCC----CCCCeEEEEcCChhh-----hhhcCcC-----C--------Cc-cccChHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGL----CIPAQIIASAPSERF-----KLHWPEP-----M--------DF-ALNDNHR 120 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~----~~~~~V~v~~r~~e~-----~~~l~~~-----~--------g~-~~~s~~e 120 (341)
+.||+|||+|.||++||..|.++|+ ...++|++|.|+++. .+.+.+. | ++ .+.|..+
T Consensus 34 p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~ 113 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLID 113 (391)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHH
Confidence 4599999999999999999998863 011359999998653 2222221 1 23 5678889
Q ss_pred HhhcCCEEEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCCCH---------HHHHHhccccCCCCCCCCeEEEEcC
Q psy316 121 IIKEAEYVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL---------ETLKKKLSVLVPNPNDAPTIIRVMP 191 (341)
Q Consensus 121 ~~~~aDvIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~---------~~l~~~l~~~~~~~~~~~~vvr~mp 191 (341)
+++++|+||++||.+.++++++++ ++++ .+++++|+++.|+.. +.+.+.++ .++.+-..|
T Consensus 114 al~~ad~ii~avPs~~~r~~l~~l-~~~~--~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~--------~~~~vLsGP 182 (391)
T 4fgw_A 114 SVKDVDIIVFNIPHQFLPRICSQL-KGHV--DSHVRAISCLKGFEVGAKGVQLLSSYITEELG--------IQCGALSGA 182 (391)
T ss_dssp HHTTCSEEEECSCGGGHHHHHHHH-TTTS--CTTCEEEECCCSCEEETTEEECHHHHHHHHHC--------CEEEEEECS
T ss_pred HHhcCCEEEEECChhhhHHHHHHh-cccc--CCCceeEEeccccccccccchhHHHHHHHHhC--------ccceeccCC
Confidence 999999999999999999999999 9999 888999999999752 33444444 231455679
Q ss_pred CchhhhcCce-EEEE-eCCCC-------CccHHHHHHHHHHHHhcCCeEEcCCC
Q psy316 192 NTAMKYGKGI-TGMC-HDVHL-------DKESEHLNMAIKIMEQGGIVEIIPES 236 (341)
Q Consensus 192 n~p~~v~~g~-~~l~-~~~~~-------~~~~~~~~~v~~ll~~lG~~~~v~e~ 236 (341)
+.+.++..|. +.++ ..... .+ ...+.++.+|..=-..++.+.+
T Consensus 183 s~A~EVa~~~pta~~iA~~~~~~~~~~~~~--~~a~~~~~lf~~~~frvy~s~D 234 (391)
T 4fgw_A 183 NIATEVAQEHWSETTVAYHIPKDFRGEGKD--VDHKVLKALFHRPYFHVSVIED 234 (391)
T ss_dssp CCHHHHHTTCCEEEEEECCCCTTCCCSSSS--CCHHHHHHHHCBTTEEEEEESC
T ss_pred chHHHhhcCCCceEEEEecChhhhhhhhHH--HHHHHHHHHhCCCCEEEEEeCC
Confidence 9998887763 3222 22111 11 2345678888765555666555
No 86
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.30 E-value=7.1e-11 Score=115.83 Aligned_cols=197 Identities=8% Similarity=0.042 Sum_probs=122.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cc-cChHHH---------------hhcC
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-AL-NDNHRI---------------IKEA 125 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~-~s~~e~---------------~~~a 125 (341)
-..|+.|||+|.||..+|..|.++|+ +|++|||++++.+.|++. .. .. ...+++ +++|
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~----~V~~~D~~~~kv~~L~~g-~~pi~epgl~~ll~~~~~~g~l~~ttd~~~a 84 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGV----DVLGVDINQQTIDKLQNG-QISIEEPGLQEVYEEVLSSGKLKVSTTPEAS 84 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTC----EEEEECSCHHHHHHHHTT-CCSSCCTTHHHHHHHHHHTTCEEEESSCCCC
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHCC-CCCcCCCCHHHHHHhhcccCceEEeCchhhC
Confidence 34689999999999999999999995 999999999999988762 11 10 011111 3579
Q ss_pred CEEEEeeChH------------HHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHh---ccccCCCCCCCCeEEEEc
Q psy316 126 EYVFLAMKPQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKK---LSVLVPNPNDAPTIIRVM 190 (341)
Q Consensus 126 DvIilaV~~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~---l~~~~~~~~~~~~vvr~m 190 (341)
|+||+|||.. .+..+.+++ .+++ +++++||.. +++++.+.++. +....+...+..+.+-.-
T Consensus 85 Dvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i-~~~l--~~g~iVV~~-STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~ 160 (431)
T 3ojo_A 85 DVFIIAVPTPNNDDQYRSCDISLVMRALDSI-LPFL--KKGNTIIVE-STIAPKTMDDFVKPVIENLGFTIGEDIYLVHC 160 (431)
T ss_dssp SEEEECCCCCBCSSSSCBBCCHHHHHHHHHH-GGGC--CTTEEEEEC-SCCCTTHHHHTHHHHHHTTTCCBTTTEEEEEC
T ss_pred CEEEEEeCCCccccccCCccHHHHHHHHHHH-HHhC--CCCCEEEEe-cCCChhHHHHHHHHHHHHcCCCcCCCeEEEEC
Confidence 9999999843 377888888 8888 889888865 57775443322 110000000122112222
Q ss_pred CCchhhhcCc---------eEEEEeCCCCCccHHHHHHHHHHHHhcCC-eEEcCCCchhHHHHHhcchHHHHHHHHHHHH
Q psy316 191 PNTAMKYGKG---------ITGMCHDVHLDKESEHLNMAIKIMEQGGI-VEIIPESMMNSFGAIAGSGCAYLFLVMDAMA 260 (341)
Q Consensus 191 pn~p~~v~~g---------~~~l~~~~~~~~~~~~~~~v~~ll~~lG~-~~~v~e~~~d~~~al~g~gpa~~~~~~eal~ 260 (341)
| .....| ..++..+ ++ +..+.++++|+.++. .+++++..-..++.++. +.|.+.-+..+.
T Consensus 161 P---e~~~~G~A~~~~~~p~~Iv~G~---~~--~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~--N~~~a~~Ia~~n 230 (431)
T 3ojo_A 161 P---ERVLPGKILEELVHNNRIIGGV---TK--ACIEAGKRVYRTFVQGEMIETDARTAEMSKLME--NTYRDVNIALAN 230 (431)
T ss_dssp C---CCCCTTSHHHHHHHSCEEEEES---SH--HHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred C---CcCCCcchhhcccCCCEEEEeC---CH--HHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 3 112222 1444443 35 788999999999986 44554333333444432 455555444444
Q ss_pred H---HHHHcCCCHHHHHHHHH
Q psy316 261 D---GAVKQGIPRDMALRIGA 278 (341)
Q Consensus 261 e---a~~~~Gl~~~~a~~lv~ 278 (341)
| .+.+.|+|.++..+.+.
T Consensus 231 E~~~l~e~~GiD~~~v~~~~~ 251 (431)
T 3ojo_A 231 ELTKICNNLNINVLDVIEMAN 251 (431)
T ss_dssp HHHHHHHHTTCCHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHHHHHHc
Confidence 4 46799999998877654
No 87
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.25 E-value=1.4e-11 Score=119.77 Aligned_cols=98 Identities=18% Similarity=0.152 Sum_probs=78.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHh-cCCCCCCeEEEEc---CChhhhhh-cCcC--------C-C--------c--cccCh
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIR-TGLCIPAQIIASA---PSERFKLH-WPEP--------M-D--------F--ALNDN 118 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~-~G~~~~~~V~v~~---r~~e~~~~-l~~~--------~-g--------~--~~~s~ 118 (341)
|+|||+|||+|+||++++..|.+ +| ++|++|+ |++++++. +++. . + + .+.++
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~G----~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRDG----VEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDP 76 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTT----EEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCH
T ss_pred CCceEEEECCCHHHHHHHHHHHhCCC----CEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCH
Confidence 45799999999999999999987 47 4999999 88777776 3321 0 1 1 23456
Q ss_pred HHHhhcCCEEEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCCCHH
Q psy316 119 HRIIKEAEYVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLE 167 (341)
Q Consensus 119 ~e~~~~aDvIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~ 167 (341)
.+++..+|+||+|||++.+.++++++ .+++ .++++|+++.++..++
T Consensus 77 ~~a~~~aD~Vilav~~~~~~~v~~~l-~~~l--~~~~ivv~~~~~~G~~ 122 (404)
T 3c7a_A 77 EIAISGADVVILTVPAFAHEGYFQAM-APYV--QDSALIVGLPSQAGFE 122 (404)
T ss_dssp HHHHTTCSEEEECSCGGGHHHHHHHH-TTTC--CTTCEEEETTCCTTHH
T ss_pred HHHhCCCCEEEEeCchHHHHHHHHHH-HhhC--CCCcEEEEcCCCccHH
Confidence 77888999999999999999999999 9998 8889999976666543
No 88
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.24 E-value=2.2e-11 Score=115.89 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=81.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc---------------cccChHHHhhcCCEE
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF---------------ALNDNHRIIKEAEYV 128 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~---------------~~~s~~e~~~~aDvI 128 (341)
+|||+|||+|.||+.++..|.++|+ +|++|+|++++++.+.+..++ ...+..+++.++|+|
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 79 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ----SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVI 79 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC----EEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEE
Confidence 3699999999999999999999984 899999999888877553221 234667778899999
Q ss_pred EEeeChHHHHHHHHHhhhcccccCCCcEEEEecC-CCCHHHHHHhc
Q psy316 129 FLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLV-GVDLETLKKKL 173 (341)
Q Consensus 129 ilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~a-gi~~~~l~~~l 173 (341)
|+|||+....++++++ .+.+ +++++||++.+ +.....+.+.+
T Consensus 80 i~~v~~~~~~~~~~~l-~~~l--~~~~~vv~~~~~~~~~~~~~~~l 122 (359)
T 1bg6_A 80 LIVVPAIHHASIAANI-ASYI--SEGQLIILNPGATGGALEFRKIL 122 (359)
T ss_dssp EECSCGGGHHHHHHHH-GGGC--CTTCEEEESSCCSSHHHHHHHHH
T ss_pred EEeCCchHHHHHHHHH-HHhC--CCCCEEEEcCCCchHHHHHHHHH
Confidence 9999999999999999 8888 88888998844 33333333433
No 89
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.14 E-value=2.1e-09 Score=111.92 Aligned_cols=153 Identities=10% Similarity=0.158 Sum_probs=117.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCc-----------------C---CC-ccccChHHHh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPE-----------------P---MD-FALNDNHRII 122 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~-----------------~---~g-~~~~s~~e~~ 122 (341)
..||+|||+|.||+.||..+..+|+ +|+++|++++.+++..+ + .. +...+..+.+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~----~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGI----SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKEL 391 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC----EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGG
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCC----chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHH
Confidence 4689999999999999999999995 99999999876553211 0 01 1222334558
Q ss_pred hcCCEEEEeeCh--HHHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCc
Q psy316 123 KEAEYVFLAMKP--QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKG 200 (341)
Q Consensus 123 ~~aDvIilaV~~--~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g 200 (341)
++||+||-||+- ..-++++.++ ..++ +++.|+.|.++++++..|.+.+. ...+ ++..|+-.|.....-
T Consensus 392 ~~aDlVIEAV~E~l~iK~~vf~~l-e~~~--~~~aIlASNTSsl~i~~ia~~~~------~p~r-~ig~HFfnP~~~m~L 461 (742)
T 3zwc_A 392 STVDLVVEAVFEDMNLKKKVFAEL-SALC--KPGAFLCTNTSALNVDDIASSTD------RPQL-VIGTHFFSPAHVMRL 461 (742)
T ss_dssp GSCSEEEECCCSCHHHHHHHHHHH-HHHS--CTTCEEEECCSSSCHHHHHTTSS------CGGG-EEEEECCSSTTTCCE
T ss_pred hhCCEEEEeccccHHHHHHHHHHH-hhcC--CCCceEEecCCcCChHHHHhhcC------Cccc-cccccccCCCCCCce
Confidence 899999999984 4456788998 8888 89999999999999999988776 3567 888887666655442
Q ss_pred eEEEEeCCCCCccHHHHHHHHHHHHhcCCeEEc
Q psy316 201 ITGMCHDVHLDKESEHLNMAIKIMEQGGIVEII 233 (341)
Q Consensus 201 ~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v 233 (341)
.=+..++..++ +..+.+..+.+.+|+..++
T Consensus 462 -VEvi~g~~Ts~--e~~~~~~~~~~~lgK~pV~ 491 (742)
T 3zwc_A 462 -LEVIPSRYSSP--TTIATVMSLSKKIGKIGVV 491 (742)
T ss_dssp -EEEEECSSCCH--HHHHHHHHHHHHTTCEEEE
T ss_pred -EEEecCCCCCH--HHHHHHHHHHHHhCCCCcc
Confidence 33556677777 9999999999999997543
No 90
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.06 E-value=8.5e-11 Score=108.70 Aligned_cols=121 Identities=14% Similarity=0.251 Sum_probs=89.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
.++|+|||+|.||.+++..|.+.|. +|++++|++++++.+.+++|+ ...+..+.+.++|+||.|+|+....++..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~----~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~ 204 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGA----KVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPE 204 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTC----EEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCC
T ss_pred CCEEEEECchHHHHHHHHHHHHcCC----EEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCC
Confidence 4789999999999999999999984 899999999999988877777 55577788899999999999875322111
Q ss_pred HhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCce
Q psy316 143 GLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGI 201 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~ 201 (341)
.+..+.+ +++++|+++.. .....++.... . . ++++|+.+..++++.
T Consensus 205 ~i~~~~l--~~g~~viDv~~-~~t~ll~~a~~------~--g--~~~v~g~~mlv~q~~ 250 (275)
T 2hk9_A 205 IFNYDLI--KKDHVVVDIIY-KETKLLKKAKE------K--G--AKLLDGLPMLLWQGI 250 (275)
T ss_dssp SSCGGGC--CTTSEEEESSS-SCCHHHHHHHH------T--T--CEEECSHHHHHHHHH
T ss_pred CCCHHHc--CCCCEEEEcCC-ChHHHHHHHHH------C--c--CEEECCHHHHHHHHH
Confidence 1201346 78889999877 44444444333 1 2 367788887776653
No 91
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.99 E-value=2.3e-08 Score=96.92 Aligned_cols=232 Identities=14% Similarity=0.086 Sum_probs=145.0
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCCh------hhhhhcCcCCCccccChHHHhhcCCEEEEeeC
Q psy316 60 HVPMWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSE------RFKLHWPEPMDFALNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 60 ~~~m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~------e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~ 133 (341)
++.-.+||+|||+|.-|.+-|.+|.++|+ +|.+--|.. .+.++..+ .|..+.+..|+++.+|+|++-+|
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv----~V~Vglr~~s~~e~~~S~~~A~~-~Gf~v~~~~eA~~~ADvV~~L~P 107 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGL----DISYALRKEAIAEKRASWRKATE-NGFKVGTYEELIPQADLVINLTP 107 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTC----EEEEEECHHHHHTTCHHHHHHHH-TTCEEEEHHHHGGGCSEEEECSC
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCC----cEEEEeCCCCcccccchHHHHHH-CCCEecCHHHHHHhCCEEEEeCC
Confidence 34456899999999999999999999996 888877722 22333444 47755578999999999999999
Q ss_pred hHHHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhh-------cCceEEEEe
Q psy316 134 PQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKY-------GKGITGMCH 206 (341)
Q Consensus 134 ~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v-------~~g~~~l~~ 206 (341)
+..-.++.+++ .|++ ++++++. .+-|..+- ...+.+ +.+.. |+-+-|-.|... |.|+..+..
T Consensus 108 D~~q~~vy~~I-~p~l--k~G~~L~-faHGFnI~-----~~~i~p-p~dvd-VimVAPKgpG~~VR~~y~~G~GvP~liA 176 (491)
T 3ulk_A 108 DKQHSDVVRTV-QPLM--KDGAALG-YSHGFNIV-----EVGEQI-RKDIT-VVMVAPKCPGTEVREEYKRGFGVPTLIA 176 (491)
T ss_dssp GGGHHHHHHHH-GGGS--CTTCEEE-ESSCHHHH-----TTCCCC-CTTSE-EEEEEESSCHHHHHHHHHTTCCCCEEEE
T ss_pred hhhHHHHHHHH-HhhC--CCCCEEE-ecCccccc-----cccccc-CCCcc-eEEeCCCCCcHHHHHHHHcCCCCceEEE
Confidence 99888999999 9999 8898876 45565432 111111 14556 777778777543 667655544
Q ss_pred C---CCCCccHHHHHHHHHHHHhcCCe----EEcC---CCchhHH---HHHhcchHHHHHHHHHHHHHHHHHcCCCHHHH
Q psy316 207 D---VHLDKESEHLNMAIKIMEQGGIV----EIIP---ESMMNSF---GAIAGSGCAYLFLVMDAMADGAVKQGIPRDMA 273 (341)
Q Consensus 207 ~---~~~~~~~~~~~~v~~ll~~lG~~----~~v~---e~~~d~~---~al~g~gpa~~~~~~eal~ea~~~~Gl~~~~a 273 (341)
- .+.+- ...+........+|.. +.-+ |...|.+ +.|+| .+..++.+.-+..++.|.+++.|
T Consensus 177 VhqeqD~sG--~a~~~AlayA~aiG~~raGvieTTF~eEtetDLfGEQaVLcG----gl~~li~agFetLveaGy~P~~a 250 (491)
T 3ulk_A 177 VHPENDPKG--EGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCG----MLQAGSLLCFDKLVEEGTDPAYA 250 (491)
T ss_dssp ECGGGCTTS--CHHHHHHHHHHHHTGGGTCEEECCHHHHHHHHHHHHHTTTTH----HHHHHHHHHHHHHHHTTCCHHHH
T ss_pred EEeCCCCch--hHHHHHHHHHHhcCCCcCceeeccHHHHHHHHHHhhHHHHHH----HHHHHHHHHHHHHHHcCCCHHHH
Confidence 3 22333 4566777777788742 3222 3233332 22322 33444555566678899999877
Q ss_pred HHHHHHHHHHHHHHHHh-hhhhccccCCCChHHHHHhcCCCc
Q psy316 274 LRIGAQLLKGSGQLVHK-DLLRMDHAAQAHPAVIKDQICSPG 314 (341)
Q Consensus 274 ~~lv~~~~~gs~~l~~~-~~~~~~~~~~~~p~~l~~~v~tpg 314 (341)
..+....+.-...++.+ ++..|-. +-+++.++.+-+.+|.
T Consensus 251 ~~~~~~e~klIvdli~egGi~~M~~-siS~TAe~G~~~~~~~ 291 (491)
T 3ulk_A 251 EKLIQFGWETITEALKQGGITLMMD-RLSNPAKLRAYALSEQ 291 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHhCCHHHHHH-hcCchhhccchhhhhh
Confidence 65554433333333333 1111111 4445666655555443
No 92
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.99 E-value=2e-10 Score=105.10 Aligned_cols=123 Identities=16% Similarity=0.225 Sum_probs=92.5
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHHHHh
Q psy316 66 KVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAIQGL 144 (341)
Q Consensus 66 kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl~~i 144 (341)
+++|||+|.||.+++..|.+.|. .+|++++|++++++.+.++++. ...+..+.+.++|+||.|+|.....+. ..+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~---~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~-~~i 185 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGV---KDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEE-LPV 185 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC---CCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCC-CSC
T ss_pred eEEEECcHHHHHHHHHHHHHcCC---CEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCC-CCC
Confidence 89999999999999999999984 5899999999999999887765 556677888999999999974211000 011
Q ss_pred hhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCceEEE
Q psy316 145 VNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKGITGM 204 (341)
Q Consensus 145 ~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g~~~l 204 (341)
....+ +++++|+++..+ +...+++... .+.+ |++|+.++.+++|...+
T Consensus 186 ~~~~l--~~~~~V~Divy~-~T~ll~~A~~------~G~~---~~~~Gl~MLv~Qa~~af 233 (253)
T 3u62_A 186 SDDSL--KNLSLVYDVIYF-DTPLVVKARK------LGVK---HIIKGNLMFYYQAMENL 233 (253)
T ss_dssp CHHHH--TTCSEEEECSSS-CCHHHHHHHH------HTCS---EEECTHHHHHHHHHHHH
T ss_pred CHHHh--CcCCEEEEeeCC-CcHHHHHHHH------CCCc---EEECCHHHHHHHHHHHH
Confidence 01235 678899999888 7666665544 2222 48999999998886443
No 93
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.98 E-value=3.4e-10 Score=107.46 Aligned_cols=102 Identities=19% Similarity=0.283 Sum_probs=78.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~vl 141 (341)
.++|||||+|+||+.+++.|...|+ +|++|+|++++.+.+.+ +|+ .. +..+++++||+|++++|+. ..+.++
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G~----~V~~~d~~~~~~~~~~~-~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i 228 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFGV----QRFLYTGRQPRPEEAAE-FQAEFV-STPELAAQSDFIVVACSLTPATEGLC 228 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTC----CEEEEESSSCCHHHHHT-TTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC----EEEEECCCCcchhHHHh-cCceeC-CHHHHHhhCCEEEEeCCCChHHHHhh
Confidence 4789999999999999999998885 89999998766555444 576 44 7888999999999999964 444444
Q ss_pred -HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.++ .+.+ +++.++|+++.| ++.+.+.+.+.
T Consensus 229 ~~~~-~~~m--k~gailIn~srg~~v~~~aL~~aL~ 261 (330)
T 2gcg_A 229 NKDF-FQKM--KETAVFINISRGDVVNQDDLYQALA 261 (330)
T ss_dssp SHHH-HHHS--CTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred CHHH-HhcC--CCCcEEEECCCCcccCHHHHHHHHH
Confidence 334 4456 788999998877 55677766665
No 94
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.95 E-value=4.8e-10 Score=107.16 Aligned_cols=103 Identities=11% Similarity=0.185 Sum_probs=79.8
Q ss_pred CCeEEEEcccHHHHHHHHHHH-hcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLI-RTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~-~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~v 140 (341)
.++|||||+|+||+++++.|. ..|. +|++|+|++++.+...+ +|+ ...+..+++++||+|++++|+. ..+.+
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~~G~----~V~~~d~~~~~~~~~~~-~g~~~~~~l~ell~~aDvVil~vp~~~~t~~l 237 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHGLGM----KLVYYDVAPADAETEKA-LGAERVDSLEELARRSDCVSVSVPYMKLTHHL 237 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCC----EEEEECSSCCCHHHHHH-HTCEECSSHHHHHHHCSEEEECCCCSGGGTTC
T ss_pred CCEEEEEEECHHHHHHHHHHHHhcCC----EEEEECCCCcchhhHhh-cCcEEeCCHHHHhccCCEEEEeCCCChHHHHH
Confidence 478999999999999999998 8884 99999998765554333 466 4457888999999999999974 45555
Q ss_pred H-HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 141 I-QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 141 l-~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
+ .++ .+.+ +++.+||+++.| ++.+.+.+.+.
T Consensus 238 i~~~~-l~~m--k~gailin~srg~~vd~~aL~~aL~ 271 (348)
T 2w2k_A 238 IDEAF-FAAM--KPGSRIVNTARGPVISQDALIAALK 271 (348)
T ss_dssp BCHHH-HHHS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hhHHH-HhcC--CCCCEEEECCCCchhCHHHHHHHHH
Confidence 4 234 4456 788999998877 56677877776
No 95
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.89 E-value=7.4e-10 Score=105.28 Aligned_cols=102 Identities=19% Similarity=0.246 Sum_probs=77.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHH-HHHHH-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQY-LDSAI- 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~-v~~vl- 141 (341)
.++|||||+|+||+.+++.|...|+ +|++|+|++++ +...+ +|+...+..+++++||+|++++|... .+.++
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~----~V~~~d~~~~~-~~~~~-~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~ 223 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNM----RILYYSRTRKE-EVERE-LNAEFKPLEDLLRESDFVVLAVPLTRETYHLIN 223 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCH-HHHHH-HCCEECCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCC----EEEEECCCcch-hhHhh-cCcccCCHHHHHhhCCEEEECCCCChHHHHhhC
Confidence 4789999999999999999999885 99999998766 43323 46623478888999999999999754 55555
Q ss_pred HHhhhcccccCCCcEEEEecCCCC--HHHHHHhcc
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGVD--LETLKKKLS 174 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi~--~~~l~~~l~ 174 (341)
.++ .+.+ +++.++|+++.|.. .+.+.+.+.
T Consensus 224 ~~~-~~~m--k~~ailIn~srg~~v~~~aL~~aL~ 255 (334)
T 2dbq_A 224 EER-LKLM--KKTAILINIARGKVVDTNALVKALK 255 (334)
T ss_dssp HHH-HHHS--CTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHH-HhcC--CCCcEEEECCCCcccCHHHHHHHHH
Confidence 344 4556 78899999877643 346666665
No 96
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.88 E-value=1.7e-09 Score=101.56 Aligned_cols=95 Identities=22% Similarity=0.246 Sum_probs=72.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC---------Cc-c-ccChHHHhhcCCEEEEeeC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM---------DF-A-LNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~---------g~-~-~~s~~e~~~~aDvIilaV~ 133 (341)
|||+|||+|+||++++..|.++|+ .++|+++||++++++.+..++ .+ . ..+. +.++++|+||+++|
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~--~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~ 78 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV--ADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLG 78 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--CSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--CCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecC
Confidence 689999999999999999999984 359999999998876554321 13 2 3455 77889999999998
Q ss_pred hHH--------------------HHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 134 PQY--------------------LDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 134 ~~~--------------------v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
+.. +.++++.+ .++. ++.+|+..++++..
T Consensus 79 ~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i-~~~~---~~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNL-KESG---FHGVLVVISNPVDV 127 (309)
T ss_dssp CGGGTC-------CTTHHHHHHHHHHHHHHH-HHTT---CCSEEEECSSSHHH
T ss_pred CcccCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHC---CCcEEEEEcCcHHH
Confidence 644 56777777 6654 56677767777664
No 97
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.88 E-value=1.3e-09 Score=103.63 Aligned_cols=98 Identities=17% Similarity=0.179 Sum_probs=75.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~vl 141 (341)
.++|||||+|+||+++++.|...|. +|++|+|+++..+ |. ...+..+++++||+|++++|+. ..+.++
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~----~V~~~dr~~~~~~------g~~~~~~l~ell~~aDvVil~vP~~~~t~~li 233 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDC----PISYFSRSKKPNT------NYTYYGSVVELASNSDILVVACPLTPETTHII 233 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTC----CEEEECSSCCTTC------CSEEESCHHHHHHTCSEEEECSCCCGGGTTCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEECCCchhcc------CceecCCHHHHHhcCCEEEEecCCChHHHHHh
Confidence 4689999999999999999998885 8999999876432 44 4567889999999999999974 455555
Q ss_pred -HHhhhcccccCCCcEEEEecCCCC--HHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVGVD--LETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~agi~--~~~l~~~l~ 174 (341)
++. .+.+ +++.+||+++.|.. .+.+.+.+.
T Consensus 234 ~~~~-l~~m--k~gailIn~srG~~vd~~aL~~aL~ 266 (333)
T 3ba1_A 234 NREV-IDAL--GPKGVLINIGRGPHVDEPELVSALV 266 (333)
T ss_dssp CHHH-HHHH--CTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred hHHH-HhcC--CCCCEEEECCCCchhCHHHHHHHHH
Confidence 234 4456 78899999887744 356666554
No 98
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.87 E-value=1.6e-09 Score=102.41 Aligned_cols=103 Identities=13% Similarity=0.099 Sum_probs=77.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcC-ChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAP-SERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDS 139 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r-~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~ 139 (341)
-.++|||||+|+||+++++.|...|. +|++|+| ++++. ...+ +|+ ...+..+++++||+|++++|.. ....
T Consensus 145 ~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~d~~~~~~~-~~~~-~g~~~~~~l~ell~~aDvVil~~p~~~~t~~ 218 (320)
T 1gdh_A 145 DNKTLGIYGFGSIGQALAKRAQGFDM----DIDYFDTHRASSS-DEAS-YQATFHDSLDSLLSVSQFFSLNAPSTPETRY 218 (320)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC----EEEEECSSCCCHH-HHHH-HTCEECSSHHHHHHHCSEEEECCCCCTTTTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC----EEEEECCCCcChh-hhhh-cCcEEcCCHHHHHhhCCEEEEeccCchHHHh
Confidence 35789999999999999999998884 9999999 87652 2222 466 5557889999999999999953 3444
Q ss_pred HH-HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 140 AI-QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 140 vl-~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
++ ++. .+.+ +++.++|++..| ++.+.+.+.+.
T Consensus 219 ~i~~~~-l~~m--k~gailIn~arg~~vd~~aL~~aL~ 253 (320)
T 1gdh_A 219 FFNKAT-IKSL--PQGAIVVNTARGDLVDNELVVAALE 253 (320)
T ss_dssp CBSHHH-HTTS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hcCHHH-HhhC--CCCcEEEECCCCcccCHHHHHHHHH
Confidence 44 233 4456 789999999877 55667776665
No 99
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.87 E-value=2.7e-09 Score=107.48 Aligned_cols=101 Identities=17% Similarity=0.237 Sum_probs=78.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~vl 141 (341)
.++|||||+|+||+++|+.|...|. +|++|||++.. +...+ .|+ .. ++.+++++||+|++|+|+. ....++
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~G~----~V~~~d~~~~~-~~a~~-~g~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i 214 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAFGA----YVVAYDPYVSP-ARAAQ-LGIELL-SLDDLLARADFISVHLPKTPETAGLI 214 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC----EEEEECTTSCH-HHHHH-HTCEEC-CHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCC----EEEEECCCCCh-hHHHh-cCcEEc-CHHHHHhcCCEEEECCCCchHHHHHh
Confidence 4789999999999999999999885 99999997632 33223 466 43 7889999999999999986 777776
Q ss_pred HH-hhhcccccCCCcEEEEecCCCCH--HHHHHhcc
Q psy316 142 QG-LVNDKVTLNSSRCIISMLVGVDL--ETLKKKLS 174 (341)
Q Consensus 142 ~~-i~~~~l~~~~~~iIVs~~agi~~--~~l~~~l~ 174 (341)
.+ + .+.+ +++.+||++..|-.. ..+.+.+.
T Consensus 215 ~~~~-~~~~--k~g~ilin~arg~iv~~~aL~~al~ 247 (529)
T 1ygy_A 215 DKEA-LAKT--KPGVIIVNAARGGLVDEAALADAIT 247 (529)
T ss_dssp CHHH-HTTS--CTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CHHH-HhCC--CCCCEEEECCCCchhhHHHHHHHHH
Confidence 54 5 5567 889999999876443 44556665
No 100
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.86 E-value=5.2e-09 Score=99.57 Aligned_cols=99 Identities=13% Similarity=0.242 Sum_probs=65.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeCh-HHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKP-QYLDSA 140 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~-~~v~~v 140 (341)
-.++|||||+|+||+++|+.+...|. +|++|+|++++. .+. ...++.+++++||+|++++|. ...+.+
T Consensus 170 ~gktiGIIGlG~IG~~vA~~l~~~G~----~V~~~dr~~~~~------~~~~~~~sl~ell~~aDvVil~vP~t~~t~~l 239 (340)
T 4dgs_A 170 KGKRIGVLGLGQIGRALASRAEAFGM----SVRYWNRSTLSG------VDWIAHQSPVDLARDSDVLAVCVAASAATQNI 239 (340)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC----EEEEECSSCCTT------SCCEECSSHHHHHHTCSEEEECC---------
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCC----EEEEEcCCcccc------cCceecCCHHHHHhcCCEEEEeCCCCHHHHHH
Confidence 35799999999999999999998885 999999987542 234 456889999999999999994 455666
Q ss_pred H-HHhhhcccccCCCcEEEEecCCCCH--HHHHHhcc
Q psy316 141 I-QGLVNDKVTLNSSRCIISMLVGVDL--ETLKKKLS 174 (341)
Q Consensus 141 l-~~i~~~~l~~~~~~iIVs~~agi~~--~~l~~~l~ 174 (341)
+ ++. ...+ +++.++|+++.|-.. +.+.+.+.
T Consensus 240 i~~~~-l~~m--k~gailIN~aRG~vvde~aL~~aL~ 273 (340)
T 4dgs_A 240 VDASL-LQAL--GPEGIVVNVARGNVVDEDALIEALK 273 (340)
T ss_dssp -CHHH-HHHT--TTTCEEEECSCC-------------
T ss_pred hhHHH-HhcC--CCCCEEEECCCCcccCHHHHHHHHH
Confidence 5 344 4456 789999999766433 34444443
No 101
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=98.83 E-value=1e-07 Score=93.59 Aligned_cols=199 Identities=9% Similarity=0.110 Sum_probs=117.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC------------------C-c-cccChHHHhhc
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM------------------D-F-ALNDNHRIIKE 124 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~------------------g-~-~~~s~~e~~~~ 124 (341)
.+|+|||+|-+|..+|..|.+.|+ +|+++|.++++.+.|++.. | + .+++..+++..
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~----~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ 97 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGH----RVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAA 97 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC----EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHT
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC----cEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhc
Confidence 589999999999999999999995 9999999999988875410 1 2 35567788999
Q ss_pred CCEEEEeeCh----------HHHHHHHHHhhhcccc-cCCCcEEEEecCCCCH----HHHHHhccccCCCCCCCCeEEEE
Q psy316 125 AEYVFLAMKP----------QYLDSAIQGLVNDKVT-LNSSRCIISMLVGVDL----ETLKKKLSVLVPNPNDAPTIIRV 189 (341)
Q Consensus 125 aDvIilaV~~----------~~v~~vl~~i~~~~l~-~~~~~iIVs~~agi~~----~~l~~~l~~~~~~~~~~~~vvr~ 189 (341)
+|++|+|||. ..+.++.+.+ .+++. ..++++||-- +++++ +.....+.+.. .+..+.+..
T Consensus 98 ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I-~~~l~~~~~g~lVV~e-STVppGtte~~~~~~l~~~~---~~~~f~v~~ 172 (444)
T 3vtf_A 98 TDATFIAVGTPPAPDGSADLRYVEAAARAV-GRGIRAKGRWHLVVVK-STVPPGTTEGLVARAVAEEA---GGVKFSVAS 172 (444)
T ss_dssp SSEEEECCCCCBCTTSSBCCHHHHHHHHHH-HHHHHHHCSCCEEEEC-SCCCTTTTTTHHHHHHHTTT---TTCCCEEEE
T ss_pred CCceEEEecCCCCCCCCCCcHHHHHHHHHH-HHHHhhcCCCeEEEEe-CCCCCchHHHHHHHHHHHhC---CCCCceeec
Confidence 9999999962 2477777777 76661 0245676632 33332 22223322100 112212222
Q ss_pred cC-----Cchhh-hcCceEEEEeCCCCCccHHHHHHHHHHHHhcCCeEEcCCCchhHHHHHhcchHHHHH---HHHHHHH
Q psy316 190 MP-----NTAMK-YGKGITGMCHDVHLDKESEHLNMAIKIMEQGGIVEIIPESMMNSFGAIAGSGCAYLF---LVMDAMA 260 (341)
Q Consensus 190 mp-----n~p~~-v~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~~~v~e~~~d~~~al~g~gpa~~~---~~~eal~ 260 (341)
-| ..... ...--.++..+. ++ ...+.+..+++.+...+.+....-..++.+.. ++|.+ .++..|.
T Consensus 173 ~PErl~eG~a~~d~~~~~riViG~~--~~--~a~~~~~~ly~~~~~~~~~~~~~~AE~~Kl~e--N~~ravnIa~~NEla 246 (444)
T 3vtf_A 173 NPEFLREGSALEDFFKPDRIVIGAG--DE--RAASFLLDVYKAVDAPKLVMKPREAELVKYAS--NVFLALKISFANEVG 246 (444)
T ss_dssp CCCCCCTTSHHHHHHSCSCEEEEES--SH--HHHHHHHHHTTTSCSCEEEECHHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred CcccccCCccccccccCCcEEEcCC--CH--HHHHHHHHHHhccCCCEEEechhHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 23 21111 011112333322 23 56677888988887765442211122333332 23333 3566667
Q ss_pred HHHHHcCCCHHHHHHHHH
Q psy316 261 DGAVKQGIPRDMALRIGA 278 (341)
Q Consensus 261 ea~~~~Gl~~~~a~~lv~ 278 (341)
..+.+.|++..+..+.+.
T Consensus 247 ~ice~~GiDv~eV~~a~~ 264 (444)
T 3vtf_A 247 LLAKRLGVDTYRVFEAVG 264 (444)
T ss_dssp HHHHHTTCCHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHhc
Confidence 778899999887766553
No 102
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.82 E-value=2.8e-09 Score=100.23 Aligned_cols=88 Identities=8% Similarity=0.093 Sum_probs=70.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhc-CCCCCCeEEEEcCChhhhhhcCcCCC--c-cccChHHHhhcCCEEEEeeChHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRT-GLCIPAQIIASAPSERFKLHWPEPMD--F-ALNDNHRIIKEAEYVFLAMKPQYLDS 139 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~-G~~~~~~V~v~~r~~e~~~~l~~~~g--~-~~~s~~e~~~~aDvIilaV~~~~v~~ 139 (341)
.++|+|||+|+||.+++++|.+. |+ ++|++|+|++++++.+.++++ + .+.+.+++++++|+||+|+|.. .+
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~g~---~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~--~~ 209 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQFSF---KEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT--EP 209 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCC---SEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS--SC
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCC---cEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC--Cc
Confidence 36899999999999999999886 63 589999999999998877666 6 6778889999999999999852 23
Q ss_pred HHHHhhhcccccCCCcEEEEec
Q psy316 140 AIQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~ 161 (341)
++. .+.+ +++++|+++.
T Consensus 210 v~~---~~~l--~~g~~vi~~g 226 (312)
T 2i99_A 210 ILF---GEWV--KPGAHINAVG 226 (312)
T ss_dssp CBC---GGGS--CTTCEEEECC
T ss_pred ccC---HHHc--CCCcEEEeCC
Confidence 332 1356 7888888763
No 103
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.81 E-value=2.8e-09 Score=101.77 Aligned_cols=102 Identities=17% Similarity=0.199 Sum_probs=76.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~vl 141 (341)
.++|||||+|+||+.+++.|...|. +|++|+|++++.. ..++|+ ...++++++++||+|++++|.. ..+.++
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~G~----~V~~~d~~~~~~~--~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li 241 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAFGF----NVLFYDPYLSDGV--ERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLI 241 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC----EEEEECTTSCTTH--HHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSB
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCC----EEEEECCCcchhh--HhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHh
Confidence 5789999999999999999998885 8999999765321 122466 5567889999999999999963 444444
Q ss_pred -HHhhhcccccCCCcEEEEecCCC--CHHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVGV--DLETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~agi--~~~~l~~~l~ 174 (341)
++. ...+ +++.++|+++.|- ..+.+.+.+.
T Consensus 242 ~~~~-l~~m--k~gailIN~arg~~vd~~aL~~aL~ 274 (347)
T 1mx3_A 242 NDFT-VKQM--RQGAFLVNTARGGLVDEKALAQALK 274 (347)
T ss_dssp SHHH-HTTS--CTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHHH-HhcC--CCCCEEEECCCChHHhHHHHHHHHH
Confidence 333 3456 7889999988763 3456666665
No 104
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.81 E-value=1.5e-08 Score=82.54 Aligned_cols=94 Identities=13% Similarity=0.120 Sum_probs=66.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cc---cChHH----HhhcCCEEEEeeChH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--AL---NDNHR----IIKEAEYVFLAMKPQ 135 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~---~s~~e----~~~~aDvIilaV~~~ 135 (341)
|+|.|||+|.+|..+++.|.+.|+ +|++++|++++++.+.+++++ .. .+... .+.++|+||+++|+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~----~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 80 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH----DIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE 80 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC----eEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc
Confidence 689999999999999999999884 899999999988877643454 11 12221 146899999999977
Q ss_pred HHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 136 YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 136 ~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
.....+..+ .+.+ +++++|+.. ++...
T Consensus 81 ~~~~~~~~~-~~~~--~~~~ii~~~-~~~~~ 107 (140)
T 1lss_A 81 EVNLMSSLL-AKSY--GINKTIARI-SEIEY 107 (140)
T ss_dssp HHHHHHHHH-HHHT--TCCCEEEEC-SSTTH
T ss_pred hHHHHHHHH-HHHc--CCCEEEEEe-cCHhH
Confidence 655555444 4445 566666644 44443
No 105
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.79 E-value=4.2e-09 Score=98.10 Aligned_cols=99 Identities=14% Similarity=0.177 Sum_probs=74.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeCh-HHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKP-QYLDSA 140 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~-~~v~~v 140 (341)
-.++|||||+|+||+++|+.|...|+ +|++|+|+++..+. . ...+.++++++||+|++++|. ...+.+
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~dr~~~~~~~------~~~~~~l~ell~~aDiV~l~~P~t~~t~~l 190 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGM----RVIAYTRSSVDQNV------DVISESPADLFRQSDFVLIAIPLTDKTRGM 190 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC----EEEEECSSCCCTTC------SEECSSHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred ecchheeeccCchhHHHHHHHHhhCc----EEEEEecccccccc------ccccCChHHHhhccCeEEEEeeccccchhh
Confidence 35799999999999999999999985 99999998765432 3 445889999999999999994 444444
Q ss_pred H-HHhhhcccccCCCcEEEEecCCC--CHHHHHHhcc
Q psy316 141 I-QGLVNDKVTLNSSRCIISMLVGV--DLETLKKKLS 174 (341)
Q Consensus 141 l-~~i~~~~l~~~~~~iIVs~~agi--~~~~l~~~l~ 174 (341)
+ .+. ...+ +++.+||++..|- ..+.+.+.+.
T Consensus 191 i~~~~-l~~m--k~gailIN~aRG~~vd~~aL~~aL~ 224 (290)
T 3gvx_A 191 VNSRL-LANA--RKNLTIVNVARADVVSKPDMIGFLK 224 (290)
T ss_dssp BSHHH-HTTC--CTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred hhHHH-Hhhh--hcCceEEEeehhcccCCcchhhhhh
Confidence 4 334 4556 7899999987553 3455655554
No 106
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.79 E-value=4.1e-09 Score=101.31 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=77.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCe-EEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQ-IIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~-V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~v 140 (341)
.++|||||+|+||+++++.|...|. + |++|+|++.+.+...+ .|+ ...+.++++++||+|++++|.. ..+.+
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~G~----~~V~~~d~~~~~~~~~~~-~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~l 238 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPFNP----KELLYYDYQALPKDAEEK-VGARRVENIEELVAQADIVTVNAPLHAGTKGL 238 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGCC----SEEEEECSSCCCHHHHHH-TTEEECSSHHHHHHTCSEEEECCCCSTTTTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC----cEEEEECCCccchhHHHh-cCcEecCCHHHHHhcCCEEEECCCCChHHHHH
Confidence 4789999999999999999998884 6 9999998755544433 577 5568899999999999999974 44444
Q ss_pred H-HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 141 I-QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 141 l-~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
+ ++. ...+ +++.+||++..| +..+.|.+.+.
T Consensus 239 i~~~~-l~~m--k~ga~lIn~arG~~vd~~aL~~aL~ 272 (364)
T 2j6i_A 239 INKEL-LSKF--KKGAWLVNTARGAICVAEDVAAALE 272 (364)
T ss_dssp BCHHH-HTTS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hCHHH-HhhC--CCCCEEEECCCCchhCHHHHHHHHH
Confidence 4 223 3456 788999998766 34566666665
No 107
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.77 E-value=6.5e-09 Score=97.62 Aligned_cols=103 Identities=21% Similarity=0.219 Sum_probs=75.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChH-HHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQ-YLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~-~v~~vl 141 (341)
..++|||||+|+||+.+++.|...|. +|++|+|++++ +...+ .|+...+.++++++||+|++++|.. ..+.++
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~d~~~~~-~~~~~-~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li 214 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGM----NILLYDPYPNE-ERAKE-VNGKFVDLETLLKESDVVTIHVPLVESTYHLI 214 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCH-HHHHH-TTCEECCHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCC----EEEEECCCCCh-hhHhh-cCccccCHHHHHhhCCEEEEecCCChHHhhhc
Confidence 34789999999999999999999885 99999998766 33333 5662237889999999999999953 234433
Q ss_pred -HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|++..| +..+.+.+.+.
T Consensus 215 ~~~~-l~~m--k~ga~lin~arg~~vd~~aL~~aL~ 247 (307)
T 1wwk_A 215 NEER-LKLM--KKTAILINTSRGPVVDTNALVKALK 247 (307)
T ss_dssp CHHH-HHHS--CTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred CHHH-HhcC--CCCeEEEECCCCcccCHHHHHHHHH
Confidence 223 3345 788999998766 33455655554
No 108
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.77 E-value=2e-09 Score=98.65 Aligned_cols=116 Identities=16% Similarity=0.185 Sum_probs=81.4
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHH---HHHH
Q psy316 66 KVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLD---SAIQ 142 (341)
Q Consensus 66 kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~---~vl~ 142 (341)
+|+|||+|.||.++++.|.+.|. +|++++|++++++.+.++++....+..++ .++|+||+|+|+.... .++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~----~v~v~~r~~~~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~ 192 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGL----EVWVWNRTPQRALALAEEFGLRAVPLEKA-REARLLVNATRVGLEDPSASPLP 192 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC----CEEEECSSHHHHHHHHHHHTCEECCGGGG-GGCSEEEECSSTTTTCTTCCSSC
T ss_pred eEEEECCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHhccchhhHhhc-cCCCEEEEccCCCCCCCCCCCCC
Confidence 89999999999999999999884 89999999998887766545423456677 8999999999987432 2221
Q ss_pred HhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEEcCCchhhhcCc
Q psy316 143 GLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKYGKG 200 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v~~g 200 (341)
.+.+ +++++|+++..+.....+.+... ... ++++++.+..++++
T Consensus 193 ---~~~l--~~g~~viD~~~~p~~t~l~~~a~-------~~g--~~~v~g~~mlv~q~ 236 (263)
T 2d5c_A 193 ---AELF--PEEGAAVDLVYRPLWTRFLREAK-------AKG--LKVQTGLPMLAWQG 236 (263)
T ss_dssp ---GGGS--CSSSEEEESCCSSSSCHHHHHHH-------HTT--CEEECSHHHHHHHH
T ss_pred ---HHHc--CCCCEEEEeecCCcccHHHHHHH-------HCc--CEEECcHHHHHHHH
Confidence 2345 67889998765422122444443 122 36778877766654
No 109
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.77 E-value=3.5e-09 Score=101.17 Aligned_cols=103 Identities=13% Similarity=0.187 Sum_probs=76.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeCh-HHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKP-QYLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~-~~v~~vl 141 (341)
.++|||||+|+||+.+++.|...|. +|++|+|++...+...+ .|+ ...+.++++++||+|++++|. .....++
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~G~----~V~~~dr~~~~~~~~~~-~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li 238 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPFGC----NLLYHDRLQMAPELEKE-TGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMF 238 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGCC----EEEEECSSCCCHHHHHH-HCCEECSCHHHHGGGCSEEEECSCCCTTTTTCB
T ss_pred CCEEeEEEeCHHHHHHHHHHHHCCC----EEEEeCCCccCHHHHHh-CCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhh
Confidence 5799999999999999999998885 89999998655444433 466 566899999999999999994 3333333
Q ss_pred -HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.+. ...+ +++.+||+++-| +..+.+.+.+.
T Consensus 239 ~~~~-l~~m--k~gailIN~aRG~~vde~aL~~aL~ 271 (351)
T 3jtm_A 239 NKEL-IGKL--KKGVLIVNNARGAIMERQAVVDAVE 271 (351)
T ss_dssp SHHH-HHHS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred cHHH-HhcC--CCCCEEEECcCchhhCHHHHHHHHH
Confidence 223 3345 789999998755 34566666554
No 110
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.76 E-value=2.5e-09 Score=101.60 Aligned_cols=101 Identities=18% Similarity=0.254 Sum_probs=75.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChH-HHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQ-YLDSAIQ 142 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~-~v~~vl~ 142 (341)
.++|||||+|+||+++++.|...|+ +|++|+|++++ +...+ +|+...+..+++++||+|++++|.. ..+.++.
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~G~----~V~~~d~~~~~-~~~~~-~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~ 219 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPFGV----KLYYWSRHRKV-NVEKE-LKARYMDIDELLEKSDIVILALPLTRDTYHIIN 219 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTC----EEEEECSSCCH-HHHHH-HTEEECCHHHHHHHCSEEEECCCCCTTTTTSBC
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCC----EEEEECCCcch-hhhhh-cCceecCHHHHHhhCCEEEEcCCCChHHHHHhC
Confidence 4789999999999999999998885 99999998765 33222 4662237888899999999999976 5555553
Q ss_pred -HhhhcccccCCCcEEEEecCCCC--HHHHHHhcc
Q psy316 143 -GLVNDKVTLNSSRCIISMLVGVD--LETLKKKLS 174 (341)
Q Consensus 143 -~i~~~~l~~~~~~iIVs~~agi~--~~~l~~~l~ 174 (341)
++ .+.+ +++ ++|+++.|.. .+.+.+.+.
T Consensus 220 ~~~-~~~m--k~g-ilin~srg~~vd~~aL~~aL~ 250 (333)
T 2d0i_A 220 EER-VKKL--EGK-YLVNIGRGALVDEKAVTEAIK 250 (333)
T ss_dssp HHH-HHHT--BTC-EEEECSCGGGBCHHHHHHHHH
T ss_pred HHH-HhhC--CCC-EEEECCCCcccCHHHHHHHHH
Confidence 33 3456 788 9998876644 344555554
No 111
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.75 E-value=4.6e-09 Score=98.89 Aligned_cols=103 Identities=12% Similarity=0.136 Sum_probs=75.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChH-HHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQ-YLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~-~v~~vl 141 (341)
..++|||||+|+||+++++.|...|. +|++|+|++++.. ..+ .|+...+..+++++||+|++++|.. ....++
T Consensus 141 ~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~d~~~~~~~-~~~-~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li 214 (313)
T 2ekl_A 141 AGKTIGIVGFGRIGTKVGIIANAMGM----KVLAYDILDIREK-AEK-INAKAVSLEELLKNSDVISLHVTVSKDAKPII 214 (313)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTC----EEEEECSSCCHHH-HHH-TTCEECCHHHHHHHCSEEEECCCCCTTSCCSB
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEECCCcchhH-HHh-cCceecCHHHHHhhCCEEEEeccCChHHHHhh
Confidence 35789999999999999999999885 9999999876642 223 5662247889999999999999953 243333
Q ss_pred -HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
++. .+.+ +++.++|++..| ++.+.+.+.+.
T Consensus 215 ~~~~-l~~m--k~ga~lIn~arg~~vd~~aL~~aL~ 247 (313)
T 2ekl_A 215 DYPQ-FELM--KDNVIIVNTSRAVAVNGKALLDYIK 247 (313)
T ss_dssp CHHH-HHHS--CTTEEEEESSCGGGBCHHHHHHHHH
T ss_pred CHHH-HhcC--CCCCEEEECCCCcccCHHHHHHHHH
Confidence 223 3345 788999998765 33456666665
No 112
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.73 E-value=2.4e-08 Score=94.70 Aligned_cols=79 Identities=20% Similarity=0.251 Sum_probs=64.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc--cccChHHHhh--cCCEEEEeeChHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF--ALNDNHRIIK--EAEYVFLAMKPQYL 137 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~--~aDvIilaV~~~~v 137 (341)
|++||||||+|+||..++..|.+.. ..++ .+++|++++++.+.+++|+ .+.+.++++. ++|+|++|+|+...
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~---~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 77 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMID---DAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTH 77 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGST---TEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCC---CcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcch
Confidence 6789999999999999999998753 2355 4899999999888776776 5788899887 79999999999876
Q ss_pred HHHHHHh
Q psy316 138 DSAIQGL 144 (341)
Q Consensus 138 ~~vl~~i 144 (341)
.+++...
T Consensus 78 ~~~~~~a 84 (344)
T 3ezy_A 78 SELVIAC 84 (344)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666544
No 113
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.73 E-value=5.4e-09 Score=101.25 Aligned_cols=103 Identities=15% Similarity=0.127 Sum_probs=76.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~vl 141 (341)
.++|||||+|+||+++++.|...|. +|++|+|++.+.+...+ +|+ ...+.++++++||+|++++|.. ..+.++
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~G~----~V~~~d~~~~~~~~~~~-~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li 265 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPFDV----HLHYTDRHRLPESVEKE-LNLTWHATREDMYPVCDVVTLNCPLHPETEHMI 265 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTC----EEEEECSSCCCHHHHHH-HTCEECSSHHHHGGGCSEEEECSCCCTTTTTCB
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCC----EEEEEcCCccchhhHhh-cCceecCCHHHHHhcCCEEEEecCCchHHHHHh
Confidence 4789999999999999999998885 89999998654443333 466 4467889999999999999942 344444
Q ss_pred -HHhhhcccccCCCcEEEEecCCC--CHHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVGV--DLETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~agi--~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|++..|- ..+.+.+.+.
T Consensus 266 ~~~~-l~~m--k~gailIN~aRG~~vde~aL~~aL~ 298 (393)
T 2nac_A 266 NDET-LKLF--KRGAYIVNTARGKLCDRDAVARALE 298 (393)
T ss_dssp SHHH-HTTS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hHHH-HhhC--CCCCEEEECCCchHhhHHHHHHHHH
Confidence 233 4456 7899999987663 3456766665
No 114
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.73 E-value=4.9e-09 Score=87.01 Aligned_cols=88 Identities=14% Similarity=0.224 Sum_probs=68.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc---cccChHHHhhcCCEEEEeeChHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF---ALNDNHRIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~---~~~s~~e~~~~aDvIilaV~~~~v~~v 140 (341)
.++|+|||+|.||..+++.|...|+ +|++++|++++++.+.++++. ...+..+.+.++|+||.|+|.... +
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~----~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~~--~ 94 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQY----KVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKTP--I 94 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTC----EEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSSC--S
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----EEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCCc--E
Confidence 5799999999999999999988874 699999999998887766665 456778888999999999986521 1
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
+ - ...+ +++.+++++..
T Consensus 95 ~--~-~~~l--~~g~~vid~~~ 111 (144)
T 3oj0_A 95 V--E-ERSL--MPGKLFIDLGN 111 (144)
T ss_dssp B--C-GGGC--CTTCEEEECCS
T ss_pred e--e-HHHc--CCCCEEEEccC
Confidence 1 1 2345 67788887643
No 115
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.72 E-value=1.2e-07 Score=79.53 Aligned_cols=96 Identities=10% Similarity=0.094 Sum_probs=67.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--ccc---ChH---HH-hhcCCEEEEeeC
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALN---DNH---RI-IKEAEYVFLAMK 133 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~---s~~---e~-~~~aDvIilaV~ 133 (341)
..++|.|||+|.+|..+++.|.+.|+ +|++++|++++++.+.++.|. ... +.. +. +..+|+||+|++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~----~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGH----SVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC----EEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC----eEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 35789999999999999999999984 999999999999888733564 212 222 12 567999999999
Q ss_pred hHHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 134 PQYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 134 ~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
+......+..+ ...+ .+...++...++..
T Consensus 94 ~~~~~~~~~~~-~~~~--~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 94 DDSTNFFISMN-ARYM--FNVENVIARVYDPE 122 (155)
T ss_dssp CHHHHHHHHHH-HHHT--SCCSEEEEECSSGG
T ss_pred CcHHHHHHHHH-HHHH--CCCCeEEEEECCHH
Confidence 76655544444 3333 34455555555543
No 116
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.72 E-value=5.4e-08 Score=92.25 Aligned_cols=78 Identities=10% Similarity=0.153 Sum_probs=65.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEE-EEcCChhhhhhcCcCCCc-cccChHHHhh--cCCEEEEeeChHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQII-ASAPSERFKLHWPEPMDF-ALNDNHRIIK--EAEYVFLAMKPQYLDS 139 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~-v~~r~~e~~~~l~~~~g~-~~~s~~e~~~--~aDvIilaV~~~~v~~ 139 (341)
++||||||+|+||..++..|.+.. ..+|. +++|++++++.+.+++|+ .+.+.++++. +.|+|++|+|+....+
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~---~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~ 80 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANP---DLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVD 80 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCT---TEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCC---CcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHH
Confidence 468999999999999999998863 23554 899999999988887888 7889999988 8999999999987777
Q ss_pred HHHHh
Q psy316 140 AIQGL 144 (341)
Q Consensus 140 vl~~i 144 (341)
++...
T Consensus 81 ~~~~a 85 (344)
T 3euw_A 81 LITRA 85 (344)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 117
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.71 E-value=1e-08 Score=98.11 Aligned_cols=102 Identities=12% Similarity=0.150 Sum_probs=75.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeCh-HHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKP-QYLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~-~~v~~vl 141 (341)
.++|||||+|+||+++|+.+...|. +|++|+|++.. +...+ .|+ ...+.++++++||+|++++|. ...+.++
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~d~~~~~-~~~~~-~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li 233 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFGM----NVLVWGRENSK-ERARA-DGFAVAESKDALFEQSDVLSVHLRLNDETRSII 233 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSHHHH-HHHHH-TTCEECSSHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCC----EEEEECCCCCH-HHHHh-cCceEeCCHHHHHhhCCEEEEeccCcHHHHHhh
Confidence 5799999999999999999999885 99999998633 33333 477 566899999999999999984 3344333
Q ss_pred -HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|++..| +..+.|.+.+.
T Consensus 234 ~~~~-l~~m--k~gailIN~aRg~~vd~~aL~~aL~ 266 (352)
T 3gg9_A 234 TVAD-LTRM--KPTALFVNTSRAELVEENGMVTALN 266 (352)
T ss_dssp CHHH-HTTS--CTTCEEEECSCGGGBCTTHHHHHHH
T ss_pred CHHH-HhhC--CCCcEEEECCCchhhcHHHHHHHHH
Confidence 233 3456 789999998754 33455555554
No 118
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.71 E-value=1.3e-08 Score=97.11 Aligned_cols=102 Identities=16% Similarity=0.199 Sum_probs=74.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeCh-HHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKP-QYLDSA 140 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~-~~v~~v 140 (341)
-.++|||||+|+||+.+|+.|...|. +|++|+|++...+... |+ ...+.++++++||+|++++|. .....+
T Consensus 172 ~gktvGIIGlG~IG~~vA~~l~~~G~----~V~~~dr~~~~~~~~~---g~~~~~~l~ell~~sDvV~l~~Plt~~T~~l 244 (345)
T 4g2n_A 172 TGRRLGIFGMGRIGRAIATRARGFGL----AIHYHNRTRLSHALEE---GAIYHDTLDSLLGASDIFLIAAPGRPELKGF 244 (345)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHTTTC----EEEEECSSCCCHHHHT---TCEECSSHHHHHHTCSEEEECSCCCGGGTTC
T ss_pred CCCEEEEEEeChhHHHHHHHHHHCCC----EEEEECCCCcchhhhc---CCeEeCCHHHHHhhCCEEEEecCCCHHHHHH
Confidence 35799999999999999999998885 9999999864433221 55 556899999999999999994 333333
Q ss_pred H-HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 141 I-QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 141 l-~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
+ .+. ...+ +++.++|+++-| ++.+.|.+.+.
T Consensus 245 i~~~~-l~~m--k~gailIN~aRG~~vde~aL~~aL~ 278 (345)
T 4g2n_A 245 LDHDR-IAKI--PEGAVVINISRGDLINDDALIEALR 278 (345)
T ss_dssp BCHHH-HHHS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hCHHH-HhhC--CCCcEEEECCCCchhCHHHHHHHHH
Confidence 3 223 3345 789999998755 34566666665
No 119
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.71 E-value=4.1e-08 Score=92.58 Aligned_cols=79 Identities=13% Similarity=0.193 Sum_probs=64.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEE-EEcCChhhhhhcCcCCCccccChHHHhh--cCCEEEEeeChHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQII-ASAPSERFKLHWPEPMDFALNDNHRIIK--EAEYVFLAMKPQYLDS 139 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~-v~~r~~e~~~~l~~~~g~~~~s~~e~~~--~aDvIilaV~~~~v~~ 139 (341)
|++||||||+|+||..++..|.+.. ..++. +++|++++++.+.+++|+...+.++++. +.|+|++|+|+....+
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~---~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~ 78 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNA---DARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPTDTHAD 78 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCT---TEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCGGGHHH
T ss_pred CceEEEEECCCHHHHHHHHHHhhCC---CcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCchhHHH
Confidence 6789999999999999999998853 23654 8999999998887767765567888887 7999999999987766
Q ss_pred HHHHh
Q psy316 140 AIQGL 144 (341)
Q Consensus 140 vl~~i 144 (341)
++...
T Consensus 79 ~~~~a 83 (331)
T 4hkt_A 79 LIERF 83 (331)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 120
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.71 E-value=9.9e-09 Score=96.21 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=74.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSA 140 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~v 140 (341)
-.++|||||+|+||+++|+.|...|+ +|++|+|+++ +. +. ...+.++++++||+|++++|.. ..+.+
T Consensus 123 ~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~dr~~~--~~-----~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~ 191 (303)
T 1qp8_A 123 QGEKVAVLGLGEIGTRVGKILAALGA----QVRGFSRTPK--EG-----PWRFTNSLEEALREARAAVCALPLNKHTRGL 191 (303)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTC----EEEEECSSCC--CS-----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTC
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC----EEEEECCCcc--cc-----CcccCCCHHHHHhhCCEEEEeCcCchHHHHH
Confidence 35789999999999999999999885 8999999875 21 33 4457889999999999999964 45555
Q ss_pred HH-HhhhcccccCCCcEEEEecCCC--CHHHHHHhcc
Q psy316 141 IQ-GLVNDKVTLNSSRCIISMLVGV--DLETLKKKLS 174 (341)
Q Consensus 141 l~-~i~~~~l~~~~~~iIVs~~agi--~~~~l~~~l~ 174 (341)
+. +. ...+ +++.++|++..|- ..+.+.+.+.
T Consensus 192 i~~~~-l~~m--k~gailin~srg~~vd~~aL~~aL~ 225 (303)
T 1qp8_A 192 VKYQH-LALM--AEDAVFVNVGRAEVLDRDGVLRILK 225 (303)
T ss_dssp BCHHH-HTTS--CTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred hCHHH-HhhC--CCCCEEEECCCCcccCHHHHHHHHH
Confidence 53 34 4556 7899999987653 3445666554
No 121
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.71 E-value=5.1e-09 Score=99.31 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=75.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeCh-HHHHHHH-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKP-QYLDSAI- 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~-~~v~~vl- 141 (341)
.++|||||+|+||+++++.|...|. +|++|+|++.+.+...+ +|+...+..+++++||+|++++|. .....++
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~G~----~V~~~d~~~~~~~~~~~-~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 219 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGWGA----TLQYHEAKALDTQTEQR-LGLRQVACSELFASSDFILLALPLNADTLHLVN 219 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTSCC----EEEEECSSCCCHHHHHH-HTEEECCHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCC----EEEEECCCCCcHhHHHh-cCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhC
Confidence 5799999999999999999988885 99999998744433333 466334789999999999999994 2333333
Q ss_pred HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|++..| +..+.+.+.+.
T Consensus 220 ~~~-l~~m--k~gailIN~arg~~vd~~aL~~aL~ 251 (330)
T 4e5n_A 220 AEL-LALV--RPGALLVNPCRGSVVDEAAVLAALE 251 (330)
T ss_dssp HHH-HTTS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHH-HhhC--CCCcEEEECCCCchhCHHHHHHHHH
Confidence 233 4456 789999998755 33556666665
No 122
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.70 E-value=1e-08 Score=96.92 Aligned_cols=103 Identities=17% Similarity=0.253 Sum_probs=75.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeCh-HHHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKP-QYLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~-~~v~~vl 141 (341)
..++|||||+|+||+.+|+.|...|. +|++|+|+++..+.+.. .....++++++++||+|++++|. ...+.++
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~----~V~~~dr~~~~~~~~~~--~~~~~~l~ell~~aDvV~l~lPlt~~t~~li 209 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGM----HVIGVNTTGHPADHFHE--TVAFTATADALATANFIVNALPLTPTTHHLF 209 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC----EEEEEESSCCCCTTCSE--EEEGGGCHHHHHHCSEEEECCCCCGGGTTCB
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCC----EEEEECCCcchhHhHhh--ccccCCHHHHHhhCCEEEEcCCCchHHHHhc
Confidence 35799999999999999999999885 99999998765544322 12345788999999999999984 3444444
Q ss_pred -HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|++.-| +..+.|.+.+.
T Consensus 210 ~~~~-l~~m--k~gailIN~aRG~~vd~~aL~~aL~ 242 (324)
T 3evt_A 210 STEL-FQQT--KQQPMLINIGRGPAVDTTALMTALD 242 (324)
T ss_dssp SHHH-HHTC--CSCCEEEECSCGGGBCHHHHHHHHH
T ss_pred CHHH-HhcC--CCCCEEEEcCCChhhhHHHHHHHHH
Confidence 233 3446 788999998754 34566666664
No 123
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.69 E-value=1.2e-08 Score=96.10 Aligned_cols=98 Identities=18% Similarity=0.231 Sum_probs=73.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChH-HHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQ-YLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~-~v~~vl 141 (341)
..++|||||+|+||+.+++.|...|. +|++|+|++++.+ +...+..+++++||+|++++|.. ....++
T Consensus 143 ~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~d~~~~~~~-------~~~~~l~ell~~aDvV~l~~p~~~~t~~li 211 (311)
T 2cuk_A 143 QGLTLGLVGMGRIGQAVAKRALAFGM----RVVYHARTPKPLP-------YPFLSLEELLKEADVVSLHTPLTPETHRLL 211 (311)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCSSS-------SCBCCHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCC----EEEEECCCCcccc-------cccCCHHHHHhhCCEEEEeCCCChHHHhhc
Confidence 34789999999999999999999885 8999999876543 12346788999999999999975 455555
Q ss_pred H-HhhhcccccCCCcEEEEecCCCC--HHHHHHhcc
Q psy316 142 Q-GLVNDKVTLNSSRCIISMLVGVD--LETLKKKLS 174 (341)
Q Consensus 142 ~-~i~~~~l~~~~~~iIVs~~agi~--~~~l~~~l~ 174 (341)
. +. ...+ +++.++|++..|-. .+.+.+.+.
T Consensus 212 ~~~~-l~~m--k~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 212 NRER-LFAM--KRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp CHHH-HTTS--CTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred CHHH-HhhC--CCCcEEEECCCCCccCHHHHHHHHh
Confidence 3 33 3456 78999999876532 344555443
No 124
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.69 E-value=9.5e-09 Score=97.14 Aligned_cols=102 Identities=12% Similarity=0.206 Sum_probs=74.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeCh-HHHHHHH-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKP-QYLDSAI- 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~-~~v~~vl- 141 (341)
.++|||||+|+||+++|+.|...|+ +|++|+|+++..+.+.. .....+.++++++||+|++++|. ...+.++
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~dr~~~~~~~~~~--~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~ 213 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHFGM----KVLGVSRSGRERAGFDQ--VYQLPALNKMLAQADVIVSVLPATRETHHLFT 213 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCCCTTCSE--EECGGGHHHHHHTCSEEEECCCCCSSSTTSBC
T ss_pred cceEEEEEECHHHHHHHHHHHhCCC----EEEEEcCChHHhhhhhc--ccccCCHHHHHhhCCEEEEeCCCCHHHHHHhH
Confidence 5799999999999999999999885 99999998744332211 11456788999999999999994 3444444
Q ss_pred HHhhhcccccCCCcEEEEecCCC--CHHHHHHhcc
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGV--DLETLKKKLS 174 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi--~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|++.-|- ..+.|.+.+.
T Consensus 214 ~~~-l~~m--k~gailIN~aRG~~vde~aL~~aL~ 245 (324)
T 3hg7_A 214 ASR-FEHC--KPGAILFNVGRGNAINEGDLLTALR 245 (324)
T ss_dssp TTT-TTCS--CTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHH-HhcC--CCCcEEEECCCchhhCHHHHHHHHH
Confidence 233 3456 7899999987553 3455666554
No 125
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.69 E-value=7.1e-09 Score=97.68 Aligned_cols=102 Identities=18% Similarity=0.180 Sum_probs=74.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeCh-HHHHHHH-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKP-QYLDSAI- 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~-~~v~~vl- 141 (341)
.++|||||+|+||+++|+.|...|+ +|++|+|+++..+.+... ....+.++++++||+|++++|. ...+.++
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~G~----~V~~~dr~~~~~~~~~~~--~~~~~l~ell~~aDiV~l~~Plt~~t~~li~ 212 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAWGF----PLRCWSRSRKSWPGVESY--VGREELRAFLNQTRVLINLLPNTAQTVGIIN 212 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTC----CEEEEESSCCCCTTCEEE--ESHHHHHHHHHTCSEEEECCCCCGGGTTCBS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCC----EEEEEcCCchhhhhhhhh--cccCCHHHHHhhCCEEEEecCCchhhhhhcc
Confidence 5789999999999999999998885 999999987654332221 0224678899999999999994 4445544
Q ss_pred HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|++.-| +..+.|.+.+.
T Consensus 213 ~~~-l~~m--k~gailIN~aRG~~vd~~aL~~aL~ 244 (315)
T 3pp8_A 213 SEL-LDQL--PDGAYVLNLARGVHVQEADLLAALD 244 (315)
T ss_dssp HHH-HTTS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHH-HhhC--CCCCEEEECCCChhhhHHHHHHHHH
Confidence 333 4456 789999998755 33556665554
No 126
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.69 E-value=1.5e-08 Score=96.18 Aligned_cols=102 Identities=13% Similarity=0.132 Sum_probs=75.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChH-HHHHHH-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQ-YLDSAI- 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~-~v~~vl- 141 (341)
.++|||||+|+||+.+|+.|...|. +|++|+|++... ...+ .|+...+.++++++||+|++++|.. ..+.++
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~G~----~V~~~d~~~~~~-~~~~-~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 238 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSFGM----KTIGYDPIISPE-VSAS-FGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLN 238 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC----EEEEECSSSCHH-HHHH-TTCEECCHHHHGGGCSEEEECCCCCTTTTTSBC
T ss_pred cCEEEEEeECHHHHHHHHHHHHCCC----EEEEECCCcchh-hhhh-cCceeCCHHHHHhcCCEEEEecCCCHHHHHhhC
Confidence 4789999999999999999998884 999999986552 2223 5662247889999999999999964 344444
Q ss_pred HHhhhcccccCCCcEEEEecCCCC--HHHHHHhcc
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGVD--LETLKKKLS 174 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi~--~~~l~~~l~ 174 (341)
.+. ...+ +++.++|++..|-. .+.+.+.+.
T Consensus 239 ~~~-l~~m--k~gailIN~arg~vvd~~aL~~aL~ 270 (335)
T 2g76_A 239 DNT-FAQC--KKGVRVVNCARGGIVDEGALLRALQ 270 (335)
T ss_dssp HHH-HTTS--CTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHH-HhhC--CCCcEEEECCCccccCHHHHHHHHH
Confidence 234 4456 78999999876633 345666555
No 127
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.69 E-value=1.3e-08 Score=95.88 Aligned_cols=95 Identities=15% Similarity=0.228 Sum_probs=69.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC--------C--ccccChHHHhhcCCEEEEeeCh
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM--------D--FALNDNHRIIKEAEYVFLAMKP 134 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~--------g--~~~~s~~e~~~~aDvIilaV~~ 134 (341)
|||+|||+|+||++++..|..+|+ ..+|+++|+++++++.+..++ . +...+ .+.++++|+||++++.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~--~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~ 77 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGF--AREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGV 77 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--CSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--CCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCC
Confidence 589999999999999999999884 248999999988776543211 1 22234 4668899999999984
Q ss_pred H----------------HHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 135 Q----------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 135 ~----------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
. .++++++.+ .++. ++.+||..++++..
T Consensus 78 ~~~~g~~r~dl~~~n~~i~~~i~~~i-~~~~---~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 78 PQKPGETRLQLLGRNARVMKEIARNV-SKYA---PDSIVIVVTNPVDV 121 (319)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHH-HHHC---TTCEEEECSSSHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH-HhhC---CCeEEEEeCCcHHH
Confidence 2 256777777 6654 56677767777664
No 128
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.68 E-value=3.9e-08 Score=92.44 Aligned_cols=79 Identities=15% Similarity=0.175 Sum_probs=61.7
Q ss_pred CCCeEEEEcccHHHH-HHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-c-ccChHHHh-hcCCEEEEeeChHHHH
Q psy316 63 MWTKVGFIGAGNMAQ-AVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-A-LNDNHRII-KEAEYVFLAMKPQYLD 138 (341)
Q Consensus 63 m~~kIgiIG~G~mG~-aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~-~~s~~e~~-~~aDvIilaV~~~~v~ 138 (341)
|++||||||+|+||. .+++.|.+.. ..+|.+++|++++++.+++++|+ . ..+..+.+ .++|+|++|+|+....
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~~---~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~ 77 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQWP---DIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHS 77 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTST---TEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCC---CceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHH
Confidence 568999999999998 5999887642 24667999999999888777777 3 55555666 6899999999998777
Q ss_pred HHHHHh
Q psy316 139 SAIQGL 144 (341)
Q Consensus 139 ~vl~~i 144 (341)
+++...
T Consensus 78 ~~~~~a 83 (323)
T 1xea_A 78 TLAAFF 83 (323)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766544
No 129
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.68 E-value=3.7e-10 Score=106.66 Aligned_cols=93 Identities=11% Similarity=0.119 Sum_probs=64.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHH-HHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQY-LDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~-v~~vl 141 (341)
++||+|||+|+||+.+++.|.+.+. ..-+.++++++++ .+. +|+ .+.+.++++.++|+||+|+|++. ...+.
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~--~elvav~d~~~~~--~~~--~gv~~~~d~~~ll~~~DvViiatp~~~h~~~~~ 76 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPD--MDLVGIFSRRATL--DTK--TPVFDVADVDKHADDVDVLFLCMGSATDIPEQA 76 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSS--EEEEEEEESSSCC--SSS--SCEEEGGGGGGTTTTCSEEEECSCTTTHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCC--CEEEEEEcCCHHH--hhc--CCCceeCCHHHHhcCCCEEEEcCCcHHHHHHHH
Confidence 4689999999999999999987641 1235689998655 333 566 66677777778999999999874 44444
Q ss_pred HHhhhcccccCCCc-EEEEecCCCCHHHH
Q psy316 142 QGLVNDKVTLNSSR-CIISMLVGVDLETL 169 (341)
Q Consensus 142 ~~i~~~~l~~~~~~-iIVs~~agi~~~~l 169 (341)
..+ ..++ +|++...+.+.+++
T Consensus 77 ~al-------~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 77 PKF-------AQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp HHH-------TTTSEEECCCCCGGGHHHH
T ss_pred HHH-------HCCCEEEECCCCcCCHHHH
Confidence 434 3344 55555445565555
No 130
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.68 E-value=2.8e-08 Score=92.43 Aligned_cols=111 Identities=13% Similarity=0.218 Sum_probs=79.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-c--ccChHHHhhcCCEEEEeeChHHHH-H
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-A--LNDNHRIIKEAEYVFLAMKPQYLD-S 139 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~--~~s~~e~~~~aDvIilaV~~~~v~-~ 139 (341)
.++|+|||+|+||..+++.|...|. +|++++|++++.+.+.+ +|+ . ..+..++++++|+|++++|...+. +
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~----~V~~~dr~~~~~~~~~~-~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~ 229 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGA----KVKVGARESDLLARIAE-MGMEPFHISKAAQELRDVDVCINTIPALVVTAN 229 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHH-TTSEEEEGGGHHHHTTTCSEEEECCSSCCBCHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCC----EEEEEECCHHHHHHHHH-CCCeecChhhHHHHhcCCCEEEECCChHHhCHH
Confidence 4789999999999999999999884 89999999887665554 565 3 346778889999999999975432 2
Q ss_pred HHHHhhhcccccCCCcEEEEecCC---CCHHHHHHhccccCCCCCCCCeEEEEcCCchhhh
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLVG---VDLETLKKKLSVLVPNPNDAPTIIRVMPNTAMKY 197 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~ag---i~~~~l~~~l~~~~~~~~~~~~vvr~mpn~p~~v 197 (341)
.+. .+ +++.++|++..+ ++.+. .+..+ . .+..+|+.|..+
T Consensus 230 ~l~-----~m--k~~~~lin~ar~~~~~~~~~-a~~~G--------v--~~~~~~~l~~~v 272 (293)
T 3d4o_A 230 VLA-----EM--PSHTFVIDLASKPGGTDFRY-AEKRG--------I--KALLVPGLPGIV 272 (293)
T ss_dssp HHH-----HS--CTTCEEEECSSTTCSBCHHH-HHHHT--------C--EEEECCCHHHHH
T ss_pred HHH-----hc--CCCCEEEEecCCCCCCCHHH-HHHCC--------C--EEEECCCCCccc
Confidence 222 34 678899998742 32311 11112 2 355678887755
No 131
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.67 E-value=6e-08 Score=91.99 Aligned_cols=79 Identities=13% Similarity=0.222 Sum_probs=64.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHH-hcCCCCCCeE-EEEcCChhhhhhcCcCCC--c-cccChHHHhhc--CCEEEEeeChH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLI-RTGLCIPAQI-IASAPSERFKLHWPEPMD--F-ALNDNHRIIKE--AEYVFLAMKPQ 135 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~-~~G~~~~~~V-~v~~r~~e~~~~l~~~~g--~-~~~s~~e~~~~--aDvIilaV~~~ 135 (341)
|++||||||+|+||..++..|. +.. ..++ .+++|++++++.+.+++| . .+.+.++++++ .|+|++|+|+.
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~---~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 77 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLS---GAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGP 77 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCS---SEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGG
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCC---CcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCch
Confidence 6789999999999999999998 432 2355 489999999998887788 5 67889998875 99999999998
Q ss_pred HHHHHHHHh
Q psy316 136 YLDSAIQGL 144 (341)
Q Consensus 136 ~v~~vl~~i 144 (341)
...+++...
T Consensus 78 ~h~~~~~~a 86 (344)
T 3mz0_A 78 AHESSVLKA 86 (344)
T ss_dssp GHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 776666554
No 132
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.67 E-value=5.2e-08 Score=90.93 Aligned_cols=78 Identities=19% Similarity=0.265 Sum_probs=64.3
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhcCCCCCCeEE-EEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHH
Q psy316 64 WTKVGFIGAGNMAQA-VATSLIRTGLCIPAQII-ASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~a-ia~~L~~~G~~~~~~V~-v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~v 140 (341)
++||||||+|+||.. ++..|.+.. ..++. +++|++++++.+++++|+ ...+.++++.+.|+|++|+|+....++
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~---~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~ 82 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSE---RFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEI 82 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCS---SSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHH
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCC---CeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHH
Confidence 479999999999996 888887642 23555 899999999988877788 778889999899999999999877776
Q ss_pred HHHh
Q psy316 141 IQGL 144 (341)
Q Consensus 141 l~~i 144 (341)
+...
T Consensus 83 ~~~a 86 (308)
T 3uuw_A 83 IKIL 86 (308)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 133
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.67 E-value=6.2e-08 Score=90.37 Aligned_cols=89 Identities=13% Similarity=0.233 Sum_probs=69.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-c--ccChHHHhhcCCEEEEeeChHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-A--LNDNHRIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~--~~s~~e~~~~aDvIilaV~~~~v~~v 140 (341)
.++|+|||+|+||.++++.|...|. +|++++|++++.+.+.+ +|+ . ..+..++++++|+|++++|+..+.+
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~----~V~~~d~~~~~~~~~~~-~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~- 230 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGA----NVKVGARSSAHLARITE-MGLVPFHTDELKEHVKDIDICINTIPSMILNQ- 230 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHH-TTCEEEEGGGHHHHSTTCSEEEECCSSCCBCH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHH-CCCeEEchhhHHHHhhCCCEEEECCChhhhCH-
Confidence 4789999999999999999999884 99999999987766544 465 2 3567788899999999999854322
Q ss_pred HHHhhhcccccCCCcEEEEecCC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~ag 163 (341)
+. ...+ +++.++|++..|
T Consensus 231 --~~-~~~m--k~g~~lin~a~g 248 (300)
T 2rir_A 231 --TV-LSSM--TPKTLILDLASR 248 (300)
T ss_dssp --HH-HTTS--CTTCEEEECSST
T ss_pred --HH-HHhC--CCCCEEEEEeCC
Confidence 12 2335 788899998754
No 134
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.66 E-value=4.8e-08 Score=93.05 Aligned_cols=100 Identities=13% Similarity=0.190 Sum_probs=72.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc-cccChHHHh--hcCCEEEEeeChHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF-ALNDNHRII--KEAEYVFLAMKPQYLD 138 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~-~~~s~~e~~--~~aDvIilaV~~~~v~ 138 (341)
|++||||||+|+||..++..|.+.. ..++ .+++|++++++.+.+++|+ .+.+.++++ .+.|+|++|+|+....
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~---~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~ 80 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSE---KLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHA 80 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCS---SEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHH
T ss_pred CcceEEEEccCHHHHHHHHHHHhCC---CcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHH
Confidence 4579999999999999999998752 2364 5899999999988776788 778899998 4699999999987666
Q ss_pred HHHHHhhhcccccCCC-cEEEEecCCCCHHHHHH
Q psy316 139 SAIQGLVNDKVTLNSS-RCIISMLVGVDLETLKK 171 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~-~iIVs~~agi~~~~l~~ 171 (341)
+++... + ..+ ++++.---+.+.++.++
T Consensus 81 ~~~~~a----l--~~gk~vl~EKP~~~~~~~~~~ 108 (354)
T 3db2_A 81 EVIEQC----A--RSGKHIYVEKPISVSLDHAQR 108 (354)
T ss_dssp HHHHHH----H--HTTCEEEEESSSCSSHHHHHH
T ss_pred HHHHHH----H--HcCCEEEEccCCCCCHHHHHH
Confidence 655443 2 233 35554323445554433
No 135
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.65 E-value=2.2e-08 Score=95.11 Aligned_cols=101 Identities=19% Similarity=0.275 Sum_probs=74.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeCh-HHHHHHH-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKP-QYLDSAI- 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~-~~v~~vl- 141 (341)
.++|||||+|+||+++|+.|...|. +|++|+|+++.... + .|+...+.++++++||+|++++|. .....++
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~G~----~V~~~d~~~~~~~~--~-~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 213 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAFGM----KVLCYDVVKREDLK--E-KGCVYTSLDELLKESDVISLHVPYTKETHHMIN 213 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCHHHH--H-TTCEECCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred CceEEEECcCHHHHHHHHHHHHCcC----EEEEECCCcchhhH--h-cCceecCHHHHHhhCCEEEEeCCCChHHHHhhC
Confidence 5799999999999999999999885 99999998765432 2 366333588999999999999994 2333333
Q ss_pred HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|++.-| +..+.|.+.+.
T Consensus 214 ~~~-l~~m--k~gailIN~aRg~~vd~~aL~~aL~ 245 (334)
T 2pi1_A 214 EER-ISLM--KDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp HHH-HHHS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHH-HhhC--CCCcEEEECCCCcccCHHHHHHHHH
Confidence 223 3345 789999998754 34566766665
No 136
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.63 E-value=2.2e-08 Score=93.83 Aligned_cols=99 Identities=18% Similarity=0.250 Sum_probs=70.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhh--hc--CcCC----Cc--cccChHHHhhcCCEEEEee
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKL--HW--PEPM----DF--ALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~--~l--~~~~----g~--~~~s~~e~~~~aDvIilaV 132 (341)
++|||+|||+|.||+.++..|..+|++ .+|++++|++++++ .+ .... .. ...+..+.+.++|+||+++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~--~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v 83 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIA--REIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITA 83 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCC--SEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--CEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECC
Confidence 347999999999999999999998842 38999999987665 22 1101 12 1222245678999999999
Q ss_pred C----h------------HHHHHHHHHhhhcccccCCCcEEEEecCCCCHH
Q psy316 133 K----P------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLE 167 (341)
Q Consensus 133 ~----~------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~ 167 (341)
+ + +.++++++++ .++ .++.+|+++++|+...
T Consensus 84 ~~~~~~g~~r~~~~~~n~~~~~~~~~~i-~~~---~~~~~vi~~~Np~~~~ 130 (319)
T 1lld_A 84 GPRQKPGQSRLELVGATVNILKAIMPNL-VKV---APNAIYMLITNPVDIA 130 (319)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHH-HHH---CTTSEEEECCSSHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHh---CCCceEEEecCchHHH
Confidence 4 2 2344777777 663 4778899999998764
No 137
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.63 E-value=1.5e-07 Score=77.62 Aligned_cols=93 Identities=16% Similarity=0.250 Sum_probs=65.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cccC--hHHH-----hhcCCEEEEe
Q psy316 61 VPMWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALND--NHRI-----IKEAEYVFLA 131 (341)
Q Consensus 61 ~~m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~s--~~e~-----~~~aDvIila 131 (341)
..|+.+|.|||+|.+|..+++.|.+.|+ +|+++++++++.+.+.+ .|+ ...+ ..+. +.++|+||++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~----~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDI----PLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTC----CEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCC----CEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 3578899999999999999999999984 99999999999988876 465 2222 1222 4689999999
Q ss_pred eChHHHH-HHHHHhhhcccccCCCcEEEEecC
Q psy316 132 MKPQYLD-SAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 132 V~~~~v~-~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
++.+... .++..+ +. + .++..+|.-..
T Consensus 79 ~~~~~~n~~~~~~a-~~-~--~~~~~iiar~~ 106 (140)
T 3fwz_A 79 IPNGYEAGEIVASA-RA-K--NPDIEIIARAH 106 (140)
T ss_dssp CSCHHHHHHHHHHH-HH-H--CSSSEEEEEES
T ss_pred CCChHHHHHHHHHH-HH-H--CCCCeEEEEEC
Confidence 9975433 344333 33 3 34444554433
No 138
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.62 E-value=1.9e-07 Score=87.74 Aligned_cols=98 Identities=10% Similarity=0.141 Sum_probs=72.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc--cccChHHHh-hcCCEEEEeeChHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF--ALNDNHRII-KEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~--~~~s~~e~~-~~aDvIilaV~~~~v~~v 140 (341)
+||||||+|+||..++..|.+.+ ..++ .+++|++++++.+.+++|. ...+.++++ .+.|+|++|+|+....++
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~---~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~ 78 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSG---EYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQ 78 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT---SEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCC---CeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHHHH
Confidence 68999999999999999998764 1354 5899999999888887775 567888888 689999999999877776
Q ss_pred HHHhhhcccccCCCc-EEEEecCCCCHHHHHH
Q psy316 141 IQGLVNDKVTLNSSR-CIISMLVGVDLETLKK 171 (341)
Q Consensus 141 l~~i~~~~l~~~~~~-iIVs~~agi~~~~l~~ 171 (341)
+... + ..++ +++----..+.++.++
T Consensus 79 ~~~a----l--~~gk~V~~EKP~~~~~~~~~~ 104 (325)
T 2ho3_A 79 AKAA----L--SAGKHVILEKPAVSQPQEWFD 104 (325)
T ss_dssp HHHH----H--HTTCEEEEESSCCSSHHHHHH
T ss_pred HHHH----H--HcCCcEEEecCCcCCHHHHHH
Confidence 6554 2 3344 5543222345554433
No 139
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.62 E-value=8.1e-08 Score=75.74 Aligned_cols=90 Identities=11% Similarity=0.050 Sum_probs=66.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--c---cc---ChHHHhhcCCEEEEeeCh
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--A---LN---DNHRIIKEAEYVFLAMKP 134 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~---~~---s~~e~~~~aDvIilaV~~ 134 (341)
|+++|+|+|+|.||..+++.|.+.|. ++|++++|++++++.+.. .++ . .. +..+.+..+|+||.++|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~---~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~ 79 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSN---YSVTVADHDLAALAVLNR-MGVATKQVDAKDEAGLAKALGGFDAVISAAPF 79 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSS---EEEEEEESCHHHHHHHHT-TTCEEEECCTTCHHHHHHHTTTCSEEEECSCG
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCC---ceEEEEeCCHHHHHHHHh-CCCcEEEecCCCHHHHHHHHcCCCEEEECCCc
Confidence 56799999999999999999999982 489999999998887764 343 1 12 234456789999999998
Q ss_pred HHHHHHHHHhhhcccccCCCcEEEEecC
Q psy316 135 QYLDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 135 ~~v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.....++... . ..+.-++.+++
T Consensus 80 ~~~~~~~~~~-~-----~~g~~~~~~~~ 101 (118)
T 3ic5_A 80 FLTPIIAKAA-K-----AAGAHYFDLTE 101 (118)
T ss_dssp GGHHHHHHHH-H-----HTTCEEECCCS
T ss_pred hhhHHHHHHH-H-----HhCCCEEEecC
Confidence 7766666554 2 23445555543
No 140
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.62 E-value=9.5e-08 Score=79.20 Aligned_cols=95 Identities=11% Similarity=0.225 Sum_probs=70.1
Q ss_pred CCCeEEEEcc----cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHH
Q psy316 63 MWTKVGFIGA----GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYL 137 (341)
Q Consensus 63 m~~kIgiIG~----G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v 137 (341)
-.++|+|||+ |+||..++++|.+.|+ +|+.++++. +.+ .|. ...+..++....|++++++|+..+
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~----~V~~vnp~~---~~i---~G~~~~~s~~el~~~vDlvii~vp~~~v 82 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGF----EVLPVNPNY---DEI---EGLKCYRSVRELPKDVDVIVFVVPPKVG 82 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTC----EEEEECTTC---SEE---TTEECBSSGGGSCTTCCEEEECSCHHHH
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCC----EEEEeCCCC---CeE---CCeeecCCHHHhCCCCCEEEEEeCHHHH
Confidence 4678999999 9999999999999995 777776653 222 477 777888888899999999999999
Q ss_pred HHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhc
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKL 173 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l 173 (341)
.++++++ .. . ..+.+++. .++. .+++.+..
T Consensus 83 ~~v~~~~-~~-~--g~~~i~~~-~~~~-~~~l~~~a 112 (138)
T 1y81_A 83 LQVAKEA-VE-A--GFKKLWFQ-PGAE-SEEIRRFL 112 (138)
T ss_dssp HHHHHHH-HH-T--TCCEEEEC-TTSC-CHHHHHHH
T ss_pred HHHHHHH-HH-c--CCCEEEEc-CccH-HHHHHHHH
Confidence 9999887 54 3 34445554 3444 34444443
No 141
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.61 E-value=7.7e-08 Score=90.47 Aligned_cols=95 Identities=18% Similarity=0.249 Sum_probs=71.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCc-----------CCCc-cccChHHHhhcCCEEEEe
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPE-----------PMDF-ALNDNHRIIKEAEYVFLA 131 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~-----------~~g~-~~~s~~e~~~~aDvIila 131 (341)
.+||+|||+|.||++++..|..+|+ .+|++||+++++++.... ...+ .+.+. +.+++||+||++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~---~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~a 79 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNL---ADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIIT 79 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC---CEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---ceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEe
Confidence 4799999999999999999999984 279999999877664210 0122 33555 778999999999
Q ss_pred e--------------Ch--HHHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 132 M--------------KP--QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 132 V--------------~~--~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
+ +. ..++++++++ .++. ++.+++..+++...
T Consensus 80 vg~p~~~g~~r~d~~~~~~~i~~~i~~~i-~~~~---~~~iii~~sNp~~~ 126 (317)
T 2ewd_A 80 ASIPGRPKDDRSELLFGNARILDSVAEGV-KKYC---PNAFVICITNPLDV 126 (317)
T ss_dssp CCCSSCCSSCGGGGHHHHHHHHHHHHHHH-HHHC---TTSEEEECCSSHHH
T ss_pred CCCCCCCCCcHHHHHHhhHHHHHHHHHHH-HHHC---CCcEEEEeCChHHH
Confidence 9 31 3467888888 7765 57888888776553
No 142
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.60 E-value=3.4e-08 Score=94.76 Aligned_cols=103 Identities=14% Similarity=0.206 Sum_probs=74.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChH-HHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQ-YLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~-~v~~vl 141 (341)
-.++|||||+|+||+.+|+.+...|. +|++|+|++. .+...+ .|+...+.++++++||+|++++|.. ..+.++
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~----~V~~~d~~~~-~~~~~~-~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li 248 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRA----RIRVFDPWLP-RSMLEE-NGVEPASLEDVLTKSDFIFVVAAVTSENKRFL 248 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCC----EEEEECSSSC-HHHHHH-TTCEECCHHHHHHSCSEEEECSCSSCC---CC
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCC----EEEEECCCCC-HHHHhh-cCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhc
Confidence 35799999999999999999988774 9999999853 233333 4663457899999999999999853 444444
Q ss_pred -HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|+++-| ++.+.|.+.+.
T Consensus 249 ~~~~-l~~m--k~gailIN~aRG~~vde~aL~~aL~ 281 (365)
T 4hy3_A 249 GAEA-FSSM--RRGAAFILLSRADVVDFDALMAAVS 281 (365)
T ss_dssp CHHH-HHTS--CTTCEEEECSCGGGSCHHHHHHHHH
T ss_pred CHHH-HhcC--CCCcEEEECcCCchhCHHHHHHHHH
Confidence 233 3446 789999998754 34566666665
No 143
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.59 E-value=3.9e-08 Score=93.36 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=73.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~vl 141 (341)
.++|||||+|+||+++++.+...|. +|++|+|++++. +.+ . + ...+..+++++||+|++++|.. ..+.++
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~d~~~~~~--~~~-~-~~~~~~l~ell~~aDvV~l~~p~~~~t~~li 217 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGFGA----KVITYDIFRNPE--LEK-K-GYYVDSLDDLYKQADVISLHVPDVPANVHMI 217 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCHH--HHH-T-TCBCSCHHHHHHHCSEEEECSCCCGGGTTCB
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC----EEEEECCCcchh--HHh-h-CeecCCHHHHHhhCCEEEEcCCCcHHHHHHH
Confidence 4789999999999999999999885 999999987653 111 2 3 3347889999999999999953 344444
Q ss_pred -HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
++. ...+ +++.++|++..| +..+.+.+.+.
T Consensus 218 ~~~~-l~~m--k~ga~lIn~arg~~vd~~aL~~aL~ 250 (333)
T 1j4a_A 218 NDES-IAKM--KQDVVIVNVSRGPLVDTDAVIRGLD 250 (333)
T ss_dssp SHHH-HHHS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hHHH-HhhC--CCCcEEEECCCCcccCHHHHHHHHH
Confidence 223 3345 788999998765 34566666665
No 144
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.59 E-value=1.1e-07 Score=89.71 Aligned_cols=81 Identities=14% Similarity=0.159 Sum_probs=63.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCe-EEEEcCChhhhhhcCcCCCc--cccChHHHhh--cCCEEEEeeChHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQ-IIASAPSERFKLHWPEPMDF--ALNDNHRIIK--EAEYVFLAMKPQYL 137 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~-V~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~--~aDvIilaV~~~~v 137 (341)
|++||||||+|+||..+++.|.+.... ..+ +.+++|++++++.+++++|+ ...|.++++. +.|+|++|+|+...
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~-~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 79 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRS-EHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQH 79 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTT-TEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGH
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCC-CeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHH
Confidence 678999999999999999988765310 123 56899999999988877787 5788899887 69999999998766
Q ss_pred HHHHHHh
Q psy316 138 DSAIQGL 144 (341)
Q Consensus 138 ~~vl~~i 144 (341)
.+++...
T Consensus 80 ~~~~~~a 86 (334)
T 3ohs_X 80 KAAVMLC 86 (334)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665444
No 145
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.59 E-value=1.2e-07 Score=85.32 Aligned_cols=80 Identities=18% Similarity=0.226 Sum_probs=61.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCccccChHHHh-hcCCEEEEeeChHHHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDFALNDNHRII-KEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~~~~s~~e~~-~~aDvIilaV~~~~v~~vl~ 142 (341)
|||||||+|+||..+++.|.+.|+ ++ .+|||++ +.+. .+.+.++++ .++|+||+|+|++...+++.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~----~lv~v~d~~~-~~~~-------~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~ 68 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGF----EIAAILDVRG-EHEK-------MVRGIDEFLQREMDVAVEAASQQAVKDYAE 68 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEEECSSC-CCTT-------EESSHHHHTTSCCSEEEECSCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCC----EEEEEEecCc-chhh-------hcCCHHHHhcCCCCEEEECCCHHHHHHHHH
Confidence 589999999999999999998774 76 7999984 3222 345778888 68999999999987777765
Q ss_pred HhhhcccccCCCcEEEEecC
Q psy316 143 GLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~~a 162 (341)
.. + ..++.|++...
T Consensus 69 ~~----l--~~G~~vv~~~~ 82 (236)
T 2dc1_A 69 KI----L--KAGIDLIVLST 82 (236)
T ss_dssp HH----H--HTTCEEEESCG
T ss_pred HH----H--HCCCcEEEECc
Confidence 44 3 45666666543
No 146
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.58 E-value=1e-07 Score=90.71 Aligned_cols=79 Identities=11% Similarity=0.057 Sum_probs=65.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc-cccChHHHhh--cCCEEEEeeChHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF-ALNDNHRIIK--EAEYVFLAMKPQYLDS 139 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~--~aDvIilaV~~~~v~~ 139 (341)
++||||||+|+||..++..|.+.. +..++ .+++|++++++.+.+++|+ .+.+.+++++ +.|+|++|+|+....+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~--~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 90 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHA--DRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHPT 90 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTT--TTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGHHH
T ss_pred cceEEEEcCcHHHHHHHHHHHhCC--CCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 468999999999999999998871 12354 5899999999988877788 7889999887 7999999999987666
Q ss_pred HHHHh
Q psy316 140 AIQGL 144 (341)
Q Consensus 140 vl~~i 144 (341)
++...
T Consensus 91 ~~~~a 95 (354)
T 3q2i_A 91 QSIEC 95 (354)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 147
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.58 E-value=1.2e-07 Score=89.45 Aligned_cols=78 Identities=10% Similarity=0.124 Sum_probs=64.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEE-EEcCChhhhhhcCcCCCc--cccChHHHhh--cCCEEEEeeChHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQII-ASAPSERFKLHWPEPMDF--ALNDNHRIIK--EAEYVFLAMKPQYLD 138 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~-v~~r~~e~~~~l~~~~g~--~~~s~~e~~~--~aDvIilaV~~~~v~ 138 (341)
++||||||+|+||..+++.|.+.. ..+|. +++|++++++.+.+++|+ .+.+.++++. +.|+|++|+|+....
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~---~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 81 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESA---QAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHY 81 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSS---SEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHH
T ss_pred eEEEEEECchHHHHHHHHHHHhCC---CcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHH
Confidence 368999999999999999998853 23554 899999999888877787 5788889887 799999999998766
Q ss_pred HHHHHh
Q psy316 139 SAIQGL 144 (341)
Q Consensus 139 ~vl~~i 144 (341)
+++...
T Consensus 82 ~~~~~a 87 (330)
T 3e9m_A 82 SAAKLA 87 (330)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666544
No 148
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.57 E-value=1.1e-07 Score=79.55 Aligned_cols=97 Identities=11% Similarity=0.082 Sum_probs=70.7
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHH
Q psy316 64 WTKVGFIGA----GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLD 138 (341)
Q Consensus 64 ~~kIgiIG~----G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~ 138 (341)
.++|+|||+ |+||..++++|.+.|+ +|+.+|++.. .+.+ .|+ ...+..++....|++++++|+..+.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~----~v~~vnp~~~-g~~i---~G~~~~~sl~el~~~~Dlvii~vp~~~v~ 84 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGY----HVIPVSPKVA-GKTL---LGQQGYATLADVPEKVDMVDVFRNSEAAW 84 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTC----CEEEECSSST-TSEE---TTEECCSSTTTCSSCCSEEECCSCSTHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCC----EEEEeCCccc-cccc---CCeeccCCHHHcCCCCCEEEEEeCHHHHH
Confidence 578999999 8999999999999995 6777766531 0122 477 6677788778899999999999999
Q ss_pred HHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhcc
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLS 174 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~ 174 (341)
++++++ .. . ..+.+++. .++. .+++.+...
T Consensus 85 ~v~~~~-~~-~--g~~~i~i~-~~~~-~~~l~~~a~ 114 (145)
T 2duw_A 85 GVAQEA-IA-I--GAKTLWLQ-LGVI-NEQAAVLAR 114 (145)
T ss_dssp HHHHHH-HH-H--TCCEEECC-TTCC-CHHHHHHHH
T ss_pred HHHHHH-HH-c--CCCEEEEc-CChH-HHHHHHHHH
Confidence 999887 54 3 44556664 3333 455555554
No 149
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.55 E-value=7.4e-08 Score=91.69 Aligned_cols=100 Identities=27% Similarity=0.318 Sum_probs=72.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeCh-HHHHHHH-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKP-QYLDSAI- 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~-~~v~~vl- 141 (341)
.++|||||+|+||+.+|+.+...|. +|++|+|+++. .+ + .++...+.++++++||+|++++|. .....++
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~G~----~V~~~d~~~~~--~~-~-~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~ 219 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAMGA----KVIAYDVAYNP--EF-E-PFLTYTDFDTVLKEADIVSLHTPLFPSTENMIG 219 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCG--GG-T-TTCEECCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred CCeEEEEecCHHHHHHHHHHhhCCC----EEEEECCChhh--hh-h-ccccccCHHHHHhcCCEEEEcCCCCHHHHHHhh
Confidence 4799999999999999999999885 99999998754 11 1 134233889999999999999994 2333333
Q ss_pred HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|++.-| +..+.|.+.+.
T Consensus 220 ~~~-l~~m--k~gailIN~aRg~~vd~~aL~~aL~ 251 (343)
T 2yq5_A 220 EKQ-LKEM--KKSAYLINCARGELVDTGALIKALQ 251 (343)
T ss_dssp HHH-HHHS--CTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHH-HhhC--CCCcEEEECCCChhhhHHHHHHHHH
Confidence 222 3345 789999998755 33556666554
No 150
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.53 E-value=8.6e-08 Score=93.26 Aligned_cols=100 Identities=13% Similarity=0.176 Sum_probs=74.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH-HHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ-YLDSA 140 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~-~v~~v 140 (341)
-.++|||||+|+||+.+|+.+...|. +|++|||+++.. . .++ ...++++++++||+|++++|.. ..+.+
T Consensus 144 ~gktlGiIGlG~IG~~vA~~l~~~G~----~V~~~d~~~~~~----~-~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~l 214 (404)
T 1sc6_A 144 RGKKLGIIGYGHIGTQLGILAESLGM----YVYFYDIENKLP----L-GNATQVQHLSDLLNMSDVVSLHVPENPSTKNM 214 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCCC----C-TTCEECSCHHHHHHHCSEEEECCCSSTTTTTC
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCC----EEEEEcCCchhc----c-CCceecCCHHHHHhcCCEEEEccCCChHHHHH
Confidence 35789999999999999999999885 999999975421 1 134 5568899999999999999964 44444
Q ss_pred H-HHhhhcccccCCCcEEEEecCCC--CHHHHHHhcc
Q psy316 141 I-QGLVNDKVTLNSSRCIISMLVGV--DLETLKKKLS 174 (341)
Q Consensus 141 l-~~i~~~~l~~~~~~iIVs~~agi--~~~~l~~~l~ 174 (341)
+ .+. ...+ +++.++|+++.|- ..+.+.+.+.
T Consensus 215 i~~~~-l~~m--k~ga~lIN~aRg~~vd~~aL~~aL~ 248 (404)
T 1sc6_A 215 MGAKE-ISLM--KPGSLLINASRGTVVDIPALADALA 248 (404)
T ss_dssp BCHHH-HHHS--CTTEEEEECSCSSSBCHHHHHHHHH
T ss_pred hhHHH-Hhhc--CCCeEEEECCCChHHhHHHHHHHHH
Confidence 4 223 3345 7899999987664 3456666665
No 151
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.53 E-value=1.3e-07 Score=91.03 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=71.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChH-H----HH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQ-Y----LD 138 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~-~----v~ 138 (341)
.++|||||+|+||+.+|+.|...|. +|.+|||+.+... .+....+.++++++||+|++++|.. . ..
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~G~----~V~~~d~~~~~~~-----~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~ 189 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEALGI----RTLLCDPPRAARG-----DEGDFRTLDELVQEADVLTFHTPLYKDGPYKTL 189 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTTC----EEEEECHHHHHTT-----CCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCT
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCC----EEEEECCChHHhc-----cCcccCCHHHHHhhCCEEEEcCcCCccccccch
Confidence 4789999999999999999999985 9999998654322 1224568899999999999999843 2 22
Q ss_pred HHH-HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 139 SAI-QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 139 ~vl-~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.++ .+. ...+ +++.++|+++-| ++.+.|.+.+.
T Consensus 190 ~li~~~~-l~~m--k~gailIN~aRG~vvde~aL~~aL~ 225 (381)
T 3oet_A 190 HLADETL-IRRL--KPGAILINACRGPVVDNAALLARLN 225 (381)
T ss_dssp TSBCHHH-HHHS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hhcCHHH-HhcC--CCCcEEEECCCCcccCHHHHHHHHH
Confidence 233 222 2335 789999998755 33556666554
No 152
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.53 E-value=2.9e-07 Score=86.73 Aligned_cols=77 Identities=9% Similarity=0.163 Sum_probs=61.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCe-EEEEcCChhhhhhcCcCCCc--cccChHHHhh--cCCEEEEeeChHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQ-IIASAPSERFKLHWPEPMDF--ALNDNHRIIK--EAEYVFLAMKPQYLDS 139 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~-V~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~--~aDvIilaV~~~~v~~ 139 (341)
+||||||+|+||..++..|.+.+. .+ +.+++|++++++.+.+++|+ .+.+.++++. +.|+|++|+|+....+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~---~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 82 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGN---GEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYK 82 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCS---EEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHH
T ss_pred eEEEEEechHHHHHHHHHHHhCCC---cEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 689999999999999999987642 34 45899999999998887887 5788899987 7999999999987666
Q ss_pred HHHHh
Q psy316 140 AIQGL 144 (341)
Q Consensus 140 vl~~i 144 (341)
++...
T Consensus 83 ~~~~a 87 (329)
T 3evn_A 83 VAKAA 87 (329)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 153
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.53 E-value=3.1e-07 Score=86.33 Aligned_cols=76 Identities=12% Similarity=0.216 Sum_probs=61.6
Q ss_pred CeEEEEcccHHHHHH-HHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc--cccChHHHhh--cCCEEEEeeChHHHH
Q psy316 65 TKVGFIGAGNMAQAV-ATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF--ALNDNHRIIK--EAEYVFLAMKPQYLD 138 (341)
Q Consensus 65 ~kIgiIG~G~mG~ai-a~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~--~aDvIilaV~~~~v~ 138 (341)
+||||||+|+||..+ +..|.+.+. ++ .+++|++++++.+.+++|+ ...+.++++. ++|+|++|+|+....
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~----~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~ 76 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGG----EVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHR 76 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTC----EEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCC----eEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhH
Confidence 589999999999998 888887543 54 5899999998888776776 5678888886 599999999998776
Q ss_pred HHHHHh
Q psy316 139 SAIQGL 144 (341)
Q Consensus 139 ~vl~~i 144 (341)
+++...
T Consensus 77 ~~~~~a 82 (332)
T 2glx_A 77 EQTLAA 82 (332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 154
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.52 E-value=1.4e-07 Score=90.84 Aligned_cols=99 Identities=17% Similarity=0.269 Sum_probs=72.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHH-----HH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQY-----LD 138 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~-----v~ 138 (341)
.++|||||+|+||+.+++.|...|. +|++|+|+++.. . .+....+.++++++||+|++++|... ..
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~d~~~~~~----~-~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~ 186 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGLGW----KVLVCDPPRQAR----E-PDGEFVSLERLLAEADVISLHTPLNRDGEHPTR 186 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTTC----EEEEECHHHHHH----S-TTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCT
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCCC----EEEEEcCChhhh----c-cCcccCCHHHHHHhCCEEEEeccCccccccchh
Confidence 4789999999999999999999885 999999876543 1 24334578899999999999998533 33
Q ss_pred HHH-HHhhhcccccCCCcEEEEecCCC--CHHHHHHhcc
Q psy316 139 SAI-QGLVNDKVTLNSSRCIISMLVGV--DLETLKKKLS 174 (341)
Q Consensus 139 ~vl-~~i~~~~l~~~~~~iIVs~~agi--~~~~l~~~l~ 174 (341)
.++ .+. ...+ +++.++|+++.|- ..+.+.+.+.
T Consensus 187 ~li~~~~-l~~m--k~gailIN~sRG~vvd~~aL~~aL~ 222 (380)
T 2o4c_A 187 HLLDEPR-LAAL--RPGTWLVNASRGAVVDNQALRRLLE 222 (380)
T ss_dssp TSBCHHH-HHTS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hhcCHHH-HhhC--CCCcEEEECCCCcccCHHHHHHHHH
Confidence 333 233 3445 7889999887653 3456666665
No 155
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.51 E-value=2.2e-07 Score=88.45 Aligned_cols=77 Identities=12% Similarity=0.181 Sum_probs=63.3
Q ss_pred CeEEEEcccHHHH-HHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc-cccChHHHhh--cCCEEEEeeChHHHHH
Q psy316 65 TKVGFIGAGNMAQ-AVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF-ALNDNHRIIK--EAEYVFLAMKPQYLDS 139 (341)
Q Consensus 65 ~kIgiIG~G~mG~-aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~--~aDvIilaV~~~~v~~ 139 (341)
+||||||+|.||. .++..|.+.. ..+| .+++|++++++.+.+++|+ ...+.++++. +.|+|++|+|+....+
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~---~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 104 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEP---LTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAE 104 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCT---TEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHH
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCC---CeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 6899999999998 7899998863 2355 4899999999988877888 6688899886 5899999999987666
Q ss_pred HHHHh
Q psy316 140 AIQGL 144 (341)
Q Consensus 140 vl~~i 144 (341)
++...
T Consensus 105 ~~~~a 109 (350)
T 3rc1_A 105 WIDRA 109 (350)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 156
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.50 E-value=1.4e-07 Score=89.45 Aligned_cols=100 Identities=18% Similarity=0.228 Sum_probs=73.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChH-HHHHHH-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQ-YLDSAI- 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~-~v~~vl- 141 (341)
.++|||||+|+||+.+++.+...|. +|++|+|++++. + ++ .+...+.++++++||+|++++|.. ..+.++
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~d~~~~~~--~-~~-~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~ 216 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGFGA----KVIAYDPYPMKG--D-HP-DFDYVSLEDLFKQSDVIDLHVPGIEQNTHIIN 216 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCSS--C-CT-TCEECCHHHHHHHCSEEEECCCCCGGGTTSBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC----EEEEECCCcchh--h-Hh-ccccCCHHHHHhcCCEEEEcCCCchhHHHHhC
Confidence 4789999999999999999999885 999999987543 2 22 232337889999999999999953 343333
Q ss_pred HHhhhcccccCCCcEEEEecCCC--CHHHHHHhcc
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGV--DLETLKKKLS 174 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi--~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|.+..|- +.+.+.+.+.
T Consensus 217 ~~~-l~~m--k~ga~lIn~srg~~vd~~aL~~aL~ 248 (333)
T 1dxy_A 217 EAA-FNLM--KPGAIVINTARPNLIDTQAMLSNLK 248 (333)
T ss_dssp HHH-HHHS--CTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHH-HhhC--CCCcEEEECCCCcccCHHHHHHHHH
Confidence 223 3345 7888999887653 3566766665
No 157
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.49 E-value=4.2e-07 Score=74.60 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=64.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cc---cChHHH----hhcCCEEEEeeCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--AL---NDNHRI----IKEAEYVFLAMKP 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~---~s~~e~----~~~aDvIilaV~~ 134 (341)
+++|.|+|+|.+|..+++.|.+.|+ +|+++++++++++.+.+. +. .. .+...+ +.++|+||+++++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~----~V~~id~~~~~~~~~~~~-~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK----KVLAVDKSKEKIELLEDE-GFDAVIADPTDESFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC----CEEEEESCHHHHHHHHHT-TCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----eEEEEECCHHHHHHHHHC-CCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence 4689999999999999999999984 999999999998887663 54 21 222211 3579999999996
Q ss_pred HHHHHHHHHhhhcccccCCCcEEEEecCCCCHHHH
Q psy316 135 QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETL 169 (341)
Q Consensus 135 ~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l 169 (341)
....-.+... ...+ ....+++........+.+
T Consensus 81 ~~~n~~~~~~-a~~~--~~~~iia~~~~~~~~~~l 112 (141)
T 3llv_A 81 DEFNLKILKA-LRSV--SDVYAIVRVSSPKKKEEF 112 (141)
T ss_dssp HHHHHHHHHH-HHHH--CCCCEEEEESCGGGHHHH
T ss_pred HHHHHHHHHH-HHHh--CCceEEEEEcChhHHHHH
Confidence 5443333333 2334 433455544333223444
No 158
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.49 E-value=3.9e-07 Score=85.28 Aligned_cols=98 Identities=15% Similarity=0.189 Sum_probs=71.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCe-EEEEcCChhhhhhcCcCCCc-cccChHHHhh--cCCEEEEeeChHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQ-IIASAPSERFKLHWPEPMDF-ALNDNHRIIK--EAEYVFLAMKPQYLD 138 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~-V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~--~aDvIilaV~~~~v~ 138 (341)
+++||||||+|+||..+++.|.+.+ ..+ +.+++|++++++.+.++ + ...+.+++++ ++|+|++|+|+....
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~---~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~~l~~~~~D~V~i~tp~~~h~ 83 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLP---GAALVRLASSNPDNLALVPPG--CVIESDWRSVVSAPEVEAVIIATPPATHA 83 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCT---TEEEEEEEESCHHHHTTCCTT--CEEESSTHHHHTCTTCCEEEEESCGGGHH
T ss_pred CcceEEEECCcHHHHHHHHHHHhCC---CcEEEEEEeCCHHHHHHHHhh--CcccCCHHHHhhCCCCCEEEEeCChHHHH
Confidence 4579999999999999999998853 135 56999999999888774 5 6678888885 799999999998777
Q ss_pred HHHHHhhhcccccCCCc-EEEEecCCCCHHHHHH
Q psy316 139 SAIQGLVNDKVTLNSSR-CIISMLVGVDLETLKK 171 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~-iIVs~~agi~~~~l~~ 171 (341)
+++... + ..++ +++.---..+.++.++
T Consensus 84 ~~~~~a----l--~~Gk~v~~eKP~~~~~~~~~~ 111 (315)
T 3c1a_A 84 EITLAA----I--ASGKAVLVEKPLTLDLAEAEA 111 (315)
T ss_dssp HHHHHH----H--HTTCEEEEESSSCSCHHHHHH
T ss_pred HHHHHH----H--HCCCcEEEcCCCcCCHHHHHH
Confidence 776554 2 3444 5543222345554443
No 159
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.49 E-value=2.1e-07 Score=90.63 Aligned_cols=99 Identities=20% Similarity=0.277 Sum_probs=72.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeCh-HHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKP-QYLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~-~~v~~vl 141 (341)
.++|||||+|+||+.+|+.+...|. +|++|||++.. .. .+. ...++++++++||+|++++|. ...+.++
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~G~----~V~~yd~~~~~----~~-~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li 226 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESLGM----TVRYYDTSDKL----QY-GNVKPAASLDELLKTSDVVSLHVPSSKSTSKLI 226 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEECTTCCC----CB-TTBEECSSHHHHHHHCSEEEECCCC-----CCB
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCC----EEEEECCcchh----cc-cCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhc
Confidence 5799999999999999999999885 99999997432 11 134 556899999999999999995 3344444
Q ss_pred -HHhhhcccccCCCcEEEEecCCC--CHHHHHHhcc
Q psy316 142 -QGLVNDKVTLNSSRCIISMLVGV--DLETLKKKLS 174 (341)
Q Consensus 142 -~~i~~~~l~~~~~~iIVs~~agi--~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|+++-|- ..+.+.+.+.
T Consensus 227 ~~~~-l~~m--k~gailIN~aRG~vvd~~aL~~aL~ 259 (416)
T 3k5p_A 227 TEAK-LRKM--KKGAFLINNARGSDVDLEALAKVLQ 259 (416)
T ss_dssp CHHH-HHHS--CTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CHHH-HhhC--CCCcEEEECCCChhhhHHHHHHHHH
Confidence 223 3345 7899999987653 3566666665
No 160
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.48 E-value=4e-07 Score=86.88 Aligned_cols=78 Identities=14% Similarity=0.147 Sum_probs=63.0
Q ss_pred CCeEEEEcccHHHHHHHHHHH-hcCCCCCCeE-EEEcCChhhhhhcCcCCC--c-cccChHHHhh--cCCEEEEeeChHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLI-RTGLCIPAQI-IASAPSERFKLHWPEPMD--F-ALNDNHRIIK--EAEYVFLAMKPQY 136 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~-~~G~~~~~~V-~v~~r~~e~~~~l~~~~g--~-~~~s~~e~~~--~aDvIilaV~~~~ 136 (341)
++||||||+|+||..++..|. +.. ..++ .+++|++++++.+.+++| . ...+.++++. +.|+|++|+|+..
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~---~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 99 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVS---GVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEA 99 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCT---TEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCC---CcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 469999999999999999998 432 2355 489999999988877777 5 6788899887 5899999999987
Q ss_pred HHHHHHHh
Q psy316 137 LDSAIQGL 144 (341)
Q Consensus 137 v~~vl~~i 144 (341)
..+++...
T Consensus 100 h~~~~~~a 107 (357)
T 3ec7_A 100 HADVAVAA 107 (357)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666544
No 161
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.46 E-value=1.4e-07 Score=89.51 Aligned_cols=100 Identities=14% Similarity=0.196 Sum_probs=73.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChH-HHHHHH-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQ-YLDSAI- 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~-~v~~vl- 141 (341)
.++|||||+|+||+.+++.+...|. +|++|+|++++. + ++ .+...+..+++++||+|++++|.. ..+.++
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~d~~~~~~--~-~~-~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~ 217 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGMGA----TVIGEDVFEIKG--I-ED-YCTQVSLDEVLEKSDIITIHAPYIKENGAVVT 217 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCCS--C-TT-TCEECCHHHHHHHCSEEEECCCCCTTTCCSBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC----EEEEECCCccHH--H-Hh-ccccCCHHHHHhhCCEEEEecCCchHHHHHhC
Confidence 4789999999999999999999885 899999987543 2 22 232347889999999999999853 333333
Q ss_pred HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
.+. ...+ +++.++|++..| ++.+.+.+.+.
T Consensus 218 ~~~-l~~m--k~ga~lin~srg~~vd~~aL~~aL~ 249 (331)
T 1xdw_A 218 RDF-LKKM--KDGAILVNCARGQLVDTEAVIEAVE 249 (331)
T ss_dssp HHH-HHTS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHH-HhhC--CCCcEEEECCCcccccHHHHHHHHH
Confidence 223 3345 788999988755 34566666665
No 162
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.46 E-value=5e-08 Score=93.20 Aligned_cols=89 Identities=11% Similarity=0.113 Sum_probs=67.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC----C--c-cccChHHHhhcCCEEEEeeChHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM----D--F-ALNDNHRIIKEAEYVFLAMKPQYL 137 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~----g--~-~~~s~~e~~~~aDvIilaV~~~~v 137 (341)
++|+|||+|.||.+++.+|.... +..+|++|+|++++++.+.+++ | + .+.+.++++.++|+||+|+|....
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~--~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~~ 207 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHL--GIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAY 207 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHS--CCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSE
T ss_pred CeEEEECCcHHHHHHHHHHHHhC--CCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCCC
Confidence 68999999999999999986532 1368999999999988876543 5 3 467888999999999999997532
Q ss_pred HHHHHHhhhcccccCCCcEEEEe
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~ 160 (341)
..++. ...+ ++++.|+.+
T Consensus 208 ~pvl~---~~~l--~~G~~V~~v 225 (350)
T 1x7d_A 208 ATIIT---PDML--EPGMHLNAV 225 (350)
T ss_dssp EEEEC---GGGC--CTTCEEEEC
T ss_pred Cceec---HHHc--CCCCEEEEC
Confidence 22321 2345 678777765
No 163
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.46 E-value=5.6e-07 Score=85.04 Aligned_cols=78 Identities=12% Similarity=0.170 Sum_probs=62.2
Q ss_pred CCeEEEEcccHHHHHHHHHHH-hcCCCCCCe-EEEEcCChhhhhhcCcCCCc--cccChHHHhh--cCCEEEEeeChHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLI-RTGLCIPAQ-IIASAPSERFKLHWPEPMDF--ALNDNHRIIK--EAEYVFLAMKPQYL 137 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~-~~G~~~~~~-V~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~--~aDvIilaV~~~~v 137 (341)
++||||||+|+||..++..|. +.. ..+ +.++++++++++.+.+++|+ ...+..+++. ++|+|++|+|+...
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~---~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h 84 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQ---GVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFH 84 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCS---SEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGH
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCC---CcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhH
Confidence 468999999999999999988 432 235 46899999999888777777 5678888886 69999999998876
Q ss_pred HHHHHHh
Q psy316 138 DSAIQGL 144 (341)
Q Consensus 138 ~~vl~~i 144 (341)
.+++...
T Consensus 85 ~~~~~~a 91 (346)
T 3cea_A 85 PEMTIYA 91 (346)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665444
No 164
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.44 E-value=2.9e-07 Score=87.14 Aligned_cols=96 Identities=17% Similarity=0.255 Sum_probs=68.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcC----c-------CCCc-cccChHHHhhcCCEEE
Q psy316 62 PMWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWP----E-------PMDF-ALNDNHRIIKEAEYVF 129 (341)
Q Consensus 62 ~m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~----~-------~~g~-~~~s~~e~~~~aDvIi 129 (341)
+|++||+|||+|.||.+++..|...|+ .+|.+||+++++++... . ...+ .+.+. +.+++||+||
T Consensus 12 ~~~~kI~ViGaG~vG~~iA~~la~~g~---~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI 87 (328)
T 2hjr_A 12 IMRKKISIIGAGQIGSTIALLLGQKDL---GDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVI 87 (328)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEE
Confidence 366899999999999999999999885 26999999987766321 1 0013 33565 7789999999
Q ss_pred Eee--Ch--------------HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 130 LAM--KP--------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 130 laV--~~--------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
+++ |. ..++++++++ .++. ++.+++-.++.++
T Consensus 88 ~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i-~~~~---p~a~viv~tNP~~ 135 (328)
T 2hjr_A 88 ITAGVPRKPNMTRSDLLTVNAKIVGSVAENV-GKYC---PNAFVICITNPLD 135 (328)
T ss_dssp ECCSCCCCTTCCSGGGHHHHHHHHHHHHHHH-HHHC---TTCEEEECCSSHH
T ss_pred EcCCCCCCCCCchhhHHhhhHHHHHHHHHHH-HHHC---CCeEEEEecCchH
Confidence 998 32 2356677777 6654 5666665556444
No 165
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.43 E-value=4.5e-07 Score=80.25 Aligned_cols=91 Identities=13% Similarity=0.155 Sum_probs=64.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cc---cCh---HHH-hhcCCEEEEeeChH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--AL---NDN---HRI-IKEAEYVFLAMKPQ 135 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~---~s~---~e~-~~~aDvIilaV~~~ 135 (341)
|||.|||+|.+|..+++.|.+.|+ +|+++++++++++.+.++.+. .. .+. .++ +.++|+||++++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~----~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 76 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKY----GVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD 76 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTC----CEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC----eEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc
Confidence 689999999999999999999984 999999999998877653443 21 222 222 56899999999987
Q ss_pred HHHHHHHHhhhcccccCCCcEEEEecC
Q psy316 136 YLDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 136 ~v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.....+..+ ...+ .+..-+|..+.
T Consensus 77 ~~n~~~~~~-a~~~--~~~~~iia~~~ 100 (218)
T 3l4b_C 77 EVNLFIAQL-VMKD--FGVKRVVSLVN 100 (218)
T ss_dssp HHHHHHHHH-HHHT--SCCCEEEECCC
T ss_pred HHHHHHHHH-HHHH--cCCCeEEEEEe
Confidence 665555444 3332 34444444433
No 166
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.43 E-value=5.9e-07 Score=85.07 Aligned_cols=96 Identities=16% Similarity=0.155 Sum_probs=68.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC-------C--C--c-cccChHHHhhcCCEEEE
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP-------M--D--F-ALNDNHRIIKEAEYVFL 130 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~-------~--g--~-~~~s~~e~~~~aDvIil 130 (341)
++|||+|||+|.||++++..|...|+ .+|.+||+++++++....+ + . + .+.+.++.+++||+||+
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~---~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~ 84 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALREL---ADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIV 84 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTC---CEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC---CeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEE
Confidence 34799999999999999999999884 2699999998766642110 1 1 2 34677778999999999
Q ss_pred ee--C--hHH-----------------HHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 131 AM--K--PQY-----------------LDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 131 aV--~--~~~-----------------v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
++ | +.. ++++++++ .++. ++.+++..++.++
T Consensus 85 a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i-~~~~---p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 85 TAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNI-KKYC---PKTFIIVVTNPLD 136 (331)
T ss_dssp CCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHH-HHHC---TTCEEEECCSSHH
T ss_pred ccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHH-HHHC---CCcEEEEEcCchH
Confidence 98 4 211 56677777 6654 6667665555544
No 167
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.42 E-value=1.1e-06 Score=83.76 Aligned_cols=77 Identities=19% Similarity=0.185 Sum_probs=62.1
Q ss_pred CeEEEEcccHHHHH-HHHHHHhcCCCCCCeEE-EEcCChhhhhhcCcCCCc--cccChHHHhhc--CCEEEEeeChHHHH
Q psy316 65 TKVGFIGAGNMAQA-VATSLIRTGLCIPAQII-ASAPSERFKLHWPEPMDF--ALNDNHRIIKE--AEYVFLAMKPQYLD 138 (341)
Q Consensus 65 ~kIgiIG~G~mG~a-ia~~L~~~G~~~~~~V~-v~~r~~e~~~~l~~~~g~--~~~s~~e~~~~--aDvIilaV~~~~v~ 138 (341)
+||||||+|+||.. +++.|.+.. ..++. +++|++++++.++++++. .+.+.++++++ .|+|++|+|+....
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~---~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 82 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQ---DIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHF 82 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCT---TEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCC---CcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHH
Confidence 68999999999985 888887752 23554 899999999999887754 67889999875 59999999998766
Q ss_pred HHHHHh
Q psy316 139 SAIQGL 144 (341)
Q Consensus 139 ~vl~~i 144 (341)
+++...
T Consensus 83 ~~~~~a 88 (359)
T 3m2t_A 83 EMGLLA 88 (359)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666544
No 168
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.41 E-value=6.4e-07 Score=83.88 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=68.3
Q ss_pred CeEEEEcccHHHHH-HHHHHHhcCCCCCCeEE-EEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 65 TKVGFIGAGNMAQA-VATSLIRTGLCIPAQII-ASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 65 ~kIgiIG~G~mG~a-ia~~L~~~G~~~~~~V~-v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
+||||||+|+||.. ++..|.+.. ..++. +++|++++++.+.+++|+ ...+.+++..++|+|++|+|+....+++
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~---~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~ 82 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAAS---DWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVV 82 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCS---SEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCC---CeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHHH
Confidence 68999999999996 888887642 23654 999999998887776677 6667766656899999999987766666
Q ss_pred HHhhhcccccCCCc-EEEEecCCCCHHHHH
Q psy316 142 QGLVNDKVTLNSSR-CIISMLVGVDLETLK 170 (341)
Q Consensus 142 ~~i~~~~l~~~~~~-iIVs~~agi~~~~l~ 170 (341)
... + ..++ +++.---+.+.++.+
T Consensus 83 ~~a----l--~~G~~v~~eKP~~~~~~~~~ 106 (319)
T 1tlt_A 83 STL----L--NAGVHVCVDKPLAENLRDAE 106 (319)
T ss_dssp HHH----H--HTTCEEEEESSSCSSHHHHH
T ss_pred HHH----H--HcCCeEEEeCCCCCCHHHHH
Confidence 544 2 3444 554322344555433
No 169
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.41 E-value=3.6e-07 Score=87.76 Aligned_cols=87 Identities=20% Similarity=0.163 Sum_probs=67.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-c-----ccChHHHhhcCCEEEEeeChHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-A-----LNDNHRIIKEAEYVFLAMKPQYL 137 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~-----~~s~~e~~~~aDvIilaV~~~~v 137 (341)
.+||+|||+|.||+.+++.|.+. + +|++++|++++++.+.++.+. . ..+..++++++|+||.|+|+...
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~----~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~ 90 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-F----DVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG 90 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-S----EEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-C----eEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhh
Confidence 57899999999999999999876 3 899999999999988875442 1 23456678899999999998765
Q ss_pred HHHHHHhhhcccccCCCcEEEEec
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~ 161 (341)
.+++... + ..++.+++++
T Consensus 91 ~~v~~a~----l--~~G~~~vD~s 108 (365)
T 2z2v_A 91 FKSIKAA----I--KSKVDMVDVS 108 (365)
T ss_dssp HHHHHHH----H--HTTCCEEECC
T ss_pred HHHHHHH----H--HhCCeEEEcc
Confidence 5555443 3 4566777764
No 170
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.39 E-value=8.7e-07 Score=76.06 Aligned_cols=90 Identities=19% Similarity=0.178 Sum_probs=62.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhc-CCCCCCeEEEEcCChhhhhhcCcCCCc--cc---cCh---HHH--hhcCCEEEEee
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRT-GLCIPAQIIASAPSERFKLHWPEPMDF--AL---NDN---HRI--IKEAEYVFLAM 132 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~-G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~---~s~---~e~--~~~aDvIilaV 132 (341)
.++|.|||+|.||..+++.|.+. |+ +|+++++++++.+.+.+ .|+ .. .+. .++ +.++|+||+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~----~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK----ISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS----CEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC----eEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 56899999999999999999998 84 89999999999888765 465 22 222 222 56799999999
Q ss_pred ChHH-HHHHHHHhhhcccccCCCcEEEEecC
Q psy316 133 KPQY-LDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 133 ~~~~-v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
++.. ...++..+ +. + .++..|+....
T Consensus 114 ~~~~~~~~~~~~~-~~-~--~~~~~ii~~~~ 140 (183)
T 3c85_A 114 PHHQGNQTALEQL-QR-R--NYKGQIAAIAE 140 (183)
T ss_dssp SSHHHHHHHHHHH-HH-T--TCCSEEEEEES
T ss_pred CChHHHHHHHHHH-HH-H--CCCCEEEEEEC
Confidence 8643 34444443 33 3 43444444433
No 171
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.37 E-value=1.8e-06 Score=82.47 Aligned_cols=76 Identities=8% Similarity=0.018 Sum_probs=61.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc-cccChHHHhh--cCCEEEEeeChHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF-ALNDNHRIIK--EAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~--~aDvIilaV~~~~v~~v 140 (341)
+||||||+|.||...+..|.+.. ..+| .++++++++++.. +++|+ .+.|.++++. +.|+|++|+|+....++
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~---~~~l~av~d~~~~~~~~a-~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 81 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAAD---NLEVHGVFDILAEKREAA-AQKGLKIYESYEAVLADEKVDAVLIATPNDSHKEL 81 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTST---TEEEEEEECSSHHHHHHH-HTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCC---CcEEEEEEcCCHHHHHHH-HhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHH
Confidence 68999999999999999888763 2355 4889999988754 44788 7889999987 78999999998776666
Q ss_pred HHHh
Q psy316 141 IQGL 144 (341)
Q Consensus 141 l~~i 144 (341)
+...
T Consensus 82 ~~~a 85 (359)
T 3e18_A 82 AISA 85 (359)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 172
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.36 E-value=7.2e-07 Score=83.44 Aligned_cols=96 Identities=18% Similarity=0.292 Sum_probs=66.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhc----CcCC----Cc-cccChHHHhhcCCEEEEeeChH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHW----PEPM----DF-ALNDNHRIIKEAEYVFLAMKPQ 135 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l----~~~~----g~-~~~s~~e~~~~aDvIilaV~~~ 135 (341)
|||+|||+|.||.+++..|...|++ .+|.++|+++++++.. .... .. ...+..+.+++||+||++++..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~--~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~ 78 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSC--SELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGAN 78 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC--SEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC---
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 5899999999999999999998842 3899999998765532 1111 12 1112346788999999999422
Q ss_pred ----------------HHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 136 ----------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 136 ----------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
.++++++++ .++ .++.+|+..++++..
T Consensus 79 ~~~g~~r~dl~~~n~~i~~~i~~~i-~~~---~p~~~vi~~tNP~~~ 121 (304)
T 2v6b_A 79 QKPGESRLDLLEKNADIFRELVPQI-TRA---APDAVLLVTSNPVDL 121 (304)
T ss_dssp ---------CHHHHHHHHHHHHHHH-HHH---CSSSEEEECSSSHHH
T ss_pred CCCCCcHHHHHHhHHHHHHHHHHHH-HHh---CCCeEEEEecCchHH
Confidence 246666777 665 366677667776654
No 173
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.35 E-value=7.7e-07 Score=85.81 Aligned_cols=79 Identities=18% Similarity=0.255 Sum_probs=64.6
Q ss_pred CCCeEEEEccc-HHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc-cccChHHHhhc--CCEEEEeeChHHH
Q psy316 63 MWTKVGFIGAG-NMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF-ALNDNHRIIKE--AEYVFLAMKPQYL 137 (341)
Q Consensus 63 m~~kIgiIG~G-~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~--aDvIilaV~~~~v 137 (341)
|++||||||+| .||..++..|.+... .++ .++++++++++.+++++|+ .+.|.++++++ .|+|++|+|+...
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~~~---~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H 77 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHHPD---AQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFH 77 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHCTT---EEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGH
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhCCC---eEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHH
Confidence 56899999999 999999999987531 344 5899999999888877888 78899999874 9999999999766
Q ss_pred HHHHHHh
Q psy316 138 DSAIQGL 144 (341)
Q Consensus 138 ~~vl~~i 144 (341)
.+++...
T Consensus 78 ~~~~~~a 84 (387)
T 3moi_A 78 CEHVVQA 84 (387)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655444
No 174
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.35 E-value=1.1e-06 Score=82.38 Aligned_cols=94 Identities=19% Similarity=0.239 Sum_probs=65.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcC----cC-----CC--c-cccChHHHhhcCCEEEEee
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWP----EP-----MD--F-ALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~----~~-----~g--~-~~~s~~e~~~~aDvIilaV 132 (341)
|||+|||+|.||.+++..|...+. .++|+++|+++++++.+. .. .. + .+.+.++ +++||+||+++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~--g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav 77 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQL--ARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITA 77 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--CSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--CCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeC
Confidence 589999999999999999988642 369999999987766432 10 01 2 3355555 89999999999
Q ss_pred Ch----------------HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 133 KP----------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 133 ~~----------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
+. ..++++.+.+ .++. ++.+|+..++++.
T Consensus 78 ~~p~~~g~~r~dl~~~n~~i~~~i~~~i-~~~~---~~~~viv~tNP~~ 122 (310)
T 1guz_A 78 GLPRKPGMTREDLLMKNAGIVKEVTDNI-MKHS---KNPIIIVVSNPLD 122 (310)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHH-HHHC---SSCEEEECCSSHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHhC---CCcEEEEEcCchH
Confidence 52 1234555666 5554 5556666666544
No 175
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.35 E-value=1.5e-06 Score=70.78 Aligned_cols=66 Identities=20% Similarity=0.381 Sum_probs=51.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cc---cChHH---H-hhcCCEEEEeeChH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--AL---NDNHR---I-IKEAEYVFLAMKPQ 135 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~---~s~~e---~-~~~aDvIilaV~~~ 135 (341)
++|.|+|+|.+|..+++.|.+.|+ +|++++|++++.+.+.+. +. .. .+.+. + +..+|+||.+++..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~----~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGH----EVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC----CCEEEESCHHHHHTTTTT-CSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHh-CCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 579999999999999999999984 899999999988877653 43 11 22221 1 46799999999863
No 176
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.35 E-value=1.2e-06 Score=83.58 Aligned_cols=78 Identities=10% Similarity=0.144 Sum_probs=62.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCC----c-cccChHHHhh--cCCEEEEeeChH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMD----F-ALNDNHRIIK--EAEYVFLAMKPQ 135 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g----~-~~~s~~e~~~--~aDvIilaV~~~ 135 (341)
++||||||+|+||..+++.|.+.. ..++ .+++|++++++.+.+++| . ...+.+++++ +.|+|++|+|+.
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~---~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 82 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAP---NATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS 82 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCT---TEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG
T ss_pred ceEEEEECchHHHHHHHHHHhhCC---CcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChH
Confidence 478999999999999999998753 1344 689999999888777666 3 5678888886 599999999998
Q ss_pred HHHHHHHHh
Q psy316 136 YLDSAIQGL 144 (341)
Q Consensus 136 ~v~~vl~~i 144 (341)
...+++...
T Consensus 83 ~h~~~~~~a 91 (362)
T 1ydw_A 83 LHVEWAIKA 91 (362)
T ss_dssp GHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777766554
No 177
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.32 E-value=1.6e-06 Score=78.53 Aligned_cols=89 Identities=18% Similarity=0.156 Sum_probs=64.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
+|||+|+|+|+||+.+++.+.+.+ +++ .+++|+++. ..|+ .+.+.++++ ++|+||-++.|..+.+.+
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~----~eLva~~d~~~~~------~~gv~v~~dl~~l~-~~DVvIDft~p~a~~~~~ 71 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKG----HEIVGVIENTPKA------TTPYQQYQHIADVK-GADVAIDFSNPNLLFPLL 71 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT----CEEEEEECSSCC--------CCSCBCSCTTTCT-TCSEEEECSCHHHHHHHH
T ss_pred ceEEEEECcCHHHHHHHHHHHhCC----CEEEEEEecCccc------cCCCceeCCHHHHh-CCCEEEEeCChHHHHHHH
Confidence 379999999999999999998876 254 468887652 2577 677777777 999999888887766655
Q ss_pred HHhhhcccccCCCcEEEEecCCCCHHHHHH
Q psy316 142 QGLVNDKVTLNSSRCIISMLVGVDLETLKK 171 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~agi~~~~l~~ 171 (341)
. + ..+.-+|..+.|.+.+++++
T Consensus 72 ~-l-------~~g~~vVigTTG~s~e~~~~ 93 (243)
T 3qy9_A 72 D-E-------DFHLPLVVATTGEKEKLLNK 93 (243)
T ss_dssp T-S-------CCCCCEEECCCSSHHHHHHH
T ss_pred H-H-------hcCCceEeCCCCCCHHHHHH
Confidence 4 4 34444455557887655443
No 178
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.31 E-value=6.8e-07 Score=82.61 Aligned_cols=94 Identities=10% Similarity=0.134 Sum_probs=67.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
.+++.|||+|.||.+++..|.+.|. .+|++++|++++++.+.++... ...+..+.+.++|+||-++|......+-.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~---~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~ 193 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVR---PTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDS 193 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCC---SCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC---CEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcC
Confidence 4689999999999999999999984 4899999999999988875433 34456666789999999998643222100
Q ss_pred HhhhcccccCCCcEEEEecC
Q psy316 143 GLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~~a 162 (341)
.+....+ +++.+|+++.-
T Consensus 194 ~l~~~~l--~~~~~V~D~vY 211 (277)
T 3don_A 194 VISLNRL--ASHTLVSDIVY 211 (277)
T ss_dssp SSCCTTC--CSSCEEEESCC
T ss_pred CCCHHHc--CCCCEEEEecC
Confidence 0102245 67888888753
No 179
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.29 E-value=1e-06 Score=83.45 Aligned_cols=80 Identities=10% Similarity=0.072 Sum_probs=57.1
Q ss_pred CCCeEEEEcccHHHHHH-HHHHHhcCCCCCCeEE-EEcCChhhhhhcCcCCCc-cccChHHHhhc--CCEEEEeeChHHH
Q psy316 63 MWTKVGFIGAGNMAQAV-ATSLIRTGLCIPAQII-ASAPSERFKLHWPEPMDF-ALNDNHRIIKE--AEYVFLAMKPQYL 137 (341)
Q Consensus 63 m~~kIgiIG~G~mG~ai-a~~L~~~G~~~~~~V~-v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~--aDvIilaV~~~~v 137 (341)
|++||||||+|.||..+ +..++... +..+|. +++|++++++...+..++ .+.|.++++.+ .|+|++|+|+...
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~~--~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 78 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNRK--DSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSH 78 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTCT--TTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGH
T ss_pred CceEEEEEecCHHHHHHHHHHHHhcC--CCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHH
Confidence 67899999999999864 44243321 234665 899998887655553356 77889998875 8999999998766
Q ss_pred HHHHHHh
Q psy316 138 DSAIQGL 144 (341)
Q Consensus 138 ~~vl~~i 144 (341)
.+++...
T Consensus 79 ~~~~~~a 85 (345)
T 3f4l_A 79 FEYAKRA 85 (345)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655443
No 180
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.28 E-value=1.3e-06 Score=86.41 Aligned_cols=98 Identities=10% Similarity=0.074 Sum_probs=72.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAIQG 143 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl~~ 143 (341)
.++|+|||+|.||+.+|+.+...|. +|++++|++.+...... .|+...+.++++++||+|++++....+-. .+
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~G~----~Viv~d~~~~~~~~a~~-~g~~~~~l~ell~~aDiVi~~~~t~~lI~--~~ 329 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGLGA----RVYITEIDPICAIQAVM-EGFNVVTLDEIVDKGDFFITCTGNVDVIK--LE 329 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHTC----EEEEECSCHHHHHHHHT-TTCEECCHHHHTTTCSEEEECCSSSSSBC--HH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCcC----EEEEEeCChhhHHHHHH-cCCEecCHHHHHhcCCEEEECCChhhhcC--HH
Confidence 5789999999999999999999885 99999999887533333 36634578899999999999974332210 12
Q ss_pred hhhcccccCCCcEEEEecCC---CCHHHHHH
Q psy316 144 LVNDKVTLNSSRCIISMLVG---VDLETLKK 171 (341)
Q Consensus 144 i~~~~l~~~~~~iIVs~~ag---i~~~~l~~ 171 (341)
. ...+ +++.+||++..| +..+.+.+
T Consensus 330 ~-l~~M--K~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 330 H-LLKM--KNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp H-HTTC--CTTCEEEECSSTTTSBCHHHHHT
T ss_pred H-Hhhc--CCCcEEEEeCCCCccccchhhhc
Confidence 2 2335 788999998766 45566666
No 181
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.28 E-value=1.3e-06 Score=82.69 Aligned_cols=77 Identities=6% Similarity=0.114 Sum_probs=60.7
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc--cccChHHHhh--cCCEEEEeeChHHH
Q psy316 64 WTKVGFIGAGNMAQA-VATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF--ALNDNHRIIK--EAEYVFLAMKPQYL 137 (341)
Q Consensus 64 ~~kIgiIG~G~mG~a-ia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~--~aDvIilaV~~~~v 137 (341)
++||||||+|.||.. ++..+.+.. ..+| .+++|++++++.+++++|+ .++|.+++++ +.|+|++|+|+..-
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~---~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H 99 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAE---NCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQH 99 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCS---SEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGH
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCC---CeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchh
Confidence 479999999999975 566676653 2355 4899999999999888887 5789999886 48999999998765
Q ss_pred HHHHHH
Q psy316 138 DSAIQG 143 (341)
Q Consensus 138 ~~vl~~ 143 (341)
.++...
T Consensus 100 ~~~~~~ 105 (350)
T 4had_A 100 IEWSIK 105 (350)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555544
No 182
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.28 E-value=2.1e-06 Score=84.07 Aligned_cols=78 Identities=9% Similarity=0.081 Sum_probs=61.1
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc------cccChHHHhh--cCCEEEEeeC
Q psy316 64 WTKVGFIGAGNMAQ-AVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF------ALNDNHRIIK--EAEYVFLAMK 133 (341)
Q Consensus 64 ~~kIgiIG~G~mG~-aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~------~~~s~~e~~~--~aDvIilaV~ 133 (341)
++||||||+|+||. .++..|.+.. ..++ .++++++++++.+.+++|+ .+.+.++++. +.|+|++|+|
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~---~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp 159 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQ---HSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILP 159 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCS---SEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSC
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCC---CcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCC
Confidence 36999999999997 8999887653 1354 6899999998887766665 2577888886 7999999999
Q ss_pred hHHHHHHHHHh
Q psy316 134 PQYLDSAIQGL 144 (341)
Q Consensus 134 ~~~v~~vl~~i 144 (341)
+....+++...
T Consensus 160 ~~~h~~~~~~a 170 (433)
T 1h6d_A 160 NSLHAEFAIRA 170 (433)
T ss_dssp GGGHHHHHHHH
T ss_pred chhHHHHHHHH
Confidence 98776666544
No 183
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.25 E-value=3.2e-06 Score=79.25 Aligned_cols=95 Identities=20% Similarity=0.212 Sum_probs=64.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhc----CcC-----CC--c-cccChHHHhhcCCEEEE
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHW----PEP-----MD--F-ALNDNHRIIKEAEYVFL 130 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l----~~~-----~g--~-~~~s~~e~~~~aDvIil 130 (341)
|+|||+|||+|.||..++..|...|+ .+|.++|+++++++.. ... .. + .+.+. +.+++||+||+
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g~---~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~ 76 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKEL---GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVV 76 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC---SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---CeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEE
Confidence 56899999999999999999999885 2699999988766532 110 01 2 23555 77899999999
Q ss_pred eeC-h---------------HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 131 AMK-P---------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 131 aV~-~---------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
++. | ..++++.+.+ ..+ .++.+|+-.++.++
T Consensus 77 a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i-~~~---~p~a~vi~~tNPv~ 123 (309)
T 1ur5_A 77 TSGAPRKPGMSREDLIKVNADITRACISQA-APL---SPNAVIIMVNNPLD 123 (309)
T ss_dssp CCCC--------CHHHHHHHHHHHHHHHHH-GGG---CTTCEEEECCSSHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-Hhh---CCCeEEEEcCCchH
Confidence 982 1 1234555555 544 35666665556544
No 184
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.20 E-value=2.5e-06 Score=70.73 Aligned_cols=96 Identities=15% Similarity=0.153 Sum_probs=70.4
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhcCCCCCCeEEEEcCChhh-hhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHH
Q psy316 64 WTKVGFIGA----GNMAQAVATSLIRTGLCIPAQIIASAPSERF-KLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYL 137 (341)
Q Consensus 64 ~~kIgiIG~----G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~-~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v 137 (341)
.++|+|||+ |++|..++++|.+.|+ + +|++|+.+ .+.+ .|. ...+..++....|++++++|+..+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~----~--v~~vnp~~~~~~i---~G~~~~~sl~el~~~vDlavi~vp~~~~ 83 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGY----R--VLPVNPRFQGEEL---FGEEAVASLLDLKEPVDILDVFRPPSAL 83 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTC----E--EEEECGGGTTSEE---TTEECBSSGGGCCSCCSEEEECSCHHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCC----E--EEEeCCCcccCcC---CCEEecCCHHHCCCCCCEEEEEeCHHHH
Confidence 568999999 8999999999999995 5 66677764 2222 367 677888877789999999999999
Q ss_pred HHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhcc
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLS 174 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~ 174 (341)
.++++++ ... ....+++. .|...+++.+...
T Consensus 84 ~~v~~~~-~~~---gi~~i~~~--~g~~~~~~~~~a~ 114 (140)
T 1iuk_A 84 MDHLPEV-LAL---RPGLVWLQ--SGIRHPEFEKALK 114 (140)
T ss_dssp TTTHHHH-HHH---CCSCEEEC--TTCCCHHHHHHHH
T ss_pred HHHHHHH-HHc---CCCEEEEc--CCcCHHHHHHHHH
Confidence 9999877 442 23345543 4555555555544
No 185
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.20 E-value=2.4e-06 Score=84.85 Aligned_cols=97 Identities=10% Similarity=0.093 Sum_probs=71.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHH-H-HHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQY-L-DSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~-v-~~vl 141 (341)
.++|+|||+|+||+.+|+.+...|. +|++|+|++.+...... .|+...+.+++++++|+|++++.... + .+.+
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~G~----~V~v~d~~~~~~~~a~~-~G~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l 351 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGLGA----TVWVTEIDPICALQAAM-EGYRVVTMEYAADKADIFVTATGNYHVINHDHM 351 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC----EEEEECSCHHHHHHHHT-TTCEECCHHHHTTTCSEEEECSSSSCSBCHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC----EEEEEeCChHhHHHHHH-cCCEeCCHHHHHhcCCEEEECCCcccccCHHHH
Confidence 4789999999999999999998885 99999999876533223 36633478899999999999985332 2 2333
Q ss_pred HHhhhcccccCCCcEEEEecCC---CCHHHHHHhc
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG---VDLETLKKKL 173 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag---i~~~~l~~~l 173 (341)
. .+ +++.+||++..| ++.+.| +.+
T Consensus 352 ~-----~M--K~gAilINvgrg~veID~~aL-~AL 378 (494)
T 3d64_A 352 K-----AM--RHNAIVCNIGHFDSEIDVAST-RQY 378 (494)
T ss_dssp H-----HC--CTTEEEEECSSSSCSBCCGGG-TTS
T ss_pred h-----hC--CCCcEEEEcCCCcchhchHHH-Hhh
Confidence 3 34 788899998765 244555 444
No 186
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.20 E-value=4.2e-06 Score=78.85 Aligned_cols=77 Identities=10% Similarity=0.094 Sum_probs=60.7
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCC-c-cccChHHHhh--cCCEEEEeeChHHH
Q psy316 64 WTKVGFIGAGNMAQ-AVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMD-F-ALNDNHRIIK--EAEYVFLAMKPQYL 137 (341)
Q Consensus 64 ~~kIgiIG~G~mG~-aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g-~-~~~s~~e~~~--~aDvIilaV~~~~v 137 (341)
++||||||+|++|. .++..|...++ +| .+++|++++++.++++++ . .+.|.+++++ +.|+|++|+|+...
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~----~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 79 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGA----ELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDR 79 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTC----EEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCc----EEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhH
Confidence 36999999999996 67777765553 64 699999999988877774 4 6788889886 68999999998766
Q ss_pred HHHHHHh
Q psy316 138 DSAIQGL 144 (341)
Q Consensus 138 ~~vl~~i 144 (341)
.++....
T Consensus 80 ~~~~~~a 86 (336)
T 2p2s_A 80 AELALRT 86 (336)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 187
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.19 E-value=8.7e-07 Score=83.59 Aligned_cols=87 Identities=14% Similarity=0.153 Sum_probs=65.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC---c--cccChHHHhhcCCEEEEeeChHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD---F--ALNDNHRIIKEAEYVFLAMKPQYLD 138 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g---~--~~~s~~e~~~~aDvIilaV~~~~v~ 138 (341)
.++|+|||+|.||..+++.|.+.. +..+|++|+|++++++.+.++++ + .+.+.++++ ++|+|+.|+|...
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~--~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~~-- 199 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVF--DIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSRK-- 199 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHS--CCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCSS--
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhC--CccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCCC--
Confidence 368999999999999999998742 13689999999999988876432 2 356778888 9999999999642
Q ss_pred HHHHHhhhcccccCCCcEEEEe
Q psy316 139 SAIQGLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~ 160 (341)
.++. ...+ ++++.|+.+
T Consensus 200 pv~~---~~~l--~~G~~V~~i 216 (322)
T 1omo_A 200 PVVK---AEWV--EEGTHINAI 216 (322)
T ss_dssp CCBC---GGGC--CTTCEEEEC
T ss_pred ceec---HHHc--CCCeEEEEC
Confidence 2221 2346 678777765
No 188
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.19 E-value=3.4e-06 Score=83.51 Aligned_cols=105 Identities=9% Similarity=0.120 Sum_probs=73.2
Q ss_pred CeEEEEcccHH-HHHHHHHHHhc--CCCCCCeEEEEcCChhhhhhcCc---C------CC--c-cccChHHHhhcCCEEE
Q psy316 65 TKVGFIGAGNM-AQAVATSLIRT--GLCIPAQIIASAPSERFKLHWPE---P------MD--F-ALNDNHRIIKEAEYVF 129 (341)
Q Consensus 65 ~kIgiIG~G~m-G~aia~~L~~~--G~~~~~~V~v~~r~~e~~~~l~~---~------~g--~-~~~s~~e~~~~aDvIi 129 (341)
+||+|||+|.. |.+++..|++. + ++.++|.+||+++++++...+ . .. + .++|..+++++||+||
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~-l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEE-FPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTT-SCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCC-CCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 59999999998 77788888887 4 234689999999987664221 0 12 2 3457678899999999
Q ss_pred EeeChH------------------------------------HHHHHHHHhhhcccccCCCcEEEEecCCCCH--HHHHH
Q psy316 130 LAMKPQ------------------------------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL--ETLKK 171 (341)
Q Consensus 130 laV~~~------------------------------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~--~~l~~ 171 (341)
++++.. .+.++++.+ ..+ .|+.+++..++.+++ +.+.+
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i-~~~---~P~A~ii~~TNPvdi~T~~~~k 183 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYM-EKY---SPDAWMLNYSNPAAIVAEATRR 183 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHH-HHH---CTTCEEEECCSCHHHHHHHHHH
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHH-HHH---CCCeEEEEeCCcHHHHHHHHHH
Confidence 999762 244555555 554 478888888887764 34444
Q ss_pred hcc
Q psy316 172 KLS 174 (341)
Q Consensus 172 ~l~ 174 (341)
..+
T Consensus 184 ~~p 186 (472)
T 1u8x_X 184 LRP 186 (472)
T ss_dssp HST
T ss_pred hCC
Confidence 444
No 189
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.18 E-value=2.6e-06 Score=83.70 Aligned_cols=70 Identities=14% Similarity=0.201 Sum_probs=53.0
Q ss_pred CCeEEEEcccHH--HHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcC---cC---C--Cc-cccChHHHhhcCCEEEEee
Q psy316 64 WTKVGFIGAGNM--AQAVATSLIRTGLCIPAQIIASAPSERFKLHWP---EP---M--DF-ALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 64 ~~kIgiIG~G~m--G~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~---~~---~--g~-~~~s~~e~~~~aDvIilaV 132 (341)
.+||+|||+|.| |..|+..|+....+.. +|.+||+++++++.+. +. . .+ .++|.++++++||+||+++
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~ai 83 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIISI 83 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEecc
Confidence 369999999996 6899999887432233 9999999987765332 11 1 23 5678889999999999999
Q ss_pred Ch
Q psy316 133 KP 134 (341)
Q Consensus 133 ~~ 134 (341)
++
T Consensus 84 rv 85 (450)
T 3fef_A 84 LP 85 (450)
T ss_dssp CS
T ss_pred cc
Confidence 75
No 190
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.18 E-value=5e-06 Score=77.62 Aligned_cols=82 Identities=9% Similarity=0.137 Sum_probs=54.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEE-EEcCChhhhhhcCcCCCc---cccChHHHhhcCCEEEEeeChHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQII-ASAPSERFKLHWPEPMDF---ALNDNHRIIKEAEYVFLAMKPQYLDS 139 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~-v~~r~~e~~~~l~~~~g~---~~~s~~e~~~~aDvIilaV~~~~v~~ 139 (341)
++||+|||+|+||..+++.|.+.. ..++. +++|++++++. +|+ ...+..+. .++|+||+|+|+....+
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~---~~elvav~d~~~~~~~~----~g~~~~~~~~l~~~-~~~DvViiatp~~~h~~ 80 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAP---DFEIAGIVRRNPAEVPF----ELQPFRVVSDIEQL-ESVDVALVCSPSREVER 80 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCT---TEEEEEEECC-----------CCTTSCEESSGGGS-SSCCEEEECSCHHHHHH
T ss_pred CCEEEEECChHHHHHHHHHHhcCC---CCEEEEEEcCCHHHHHH----cCCCcCCHHHHHhC-CCCCEEEECCCchhhHH
Confidence 469999999999999999998743 24665 79999887654 454 23444443 68999999999987766
Q ss_pred HHHHhhhcccccCCCcEEEE
Q psy316 140 AIQGLVNDKVTLNSSRCIIS 159 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs 159 (341)
++... + ..++-|+.
T Consensus 81 ~~~~a----l--~aG~~Vi~ 94 (304)
T 3bio_A 81 TALEI----L--KKGICTAD 94 (304)
T ss_dssp HHHHH----H--TTTCEEEE
T ss_pred HHHHH----H--HcCCeEEE
Confidence 66554 3 44555553
No 191
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.18 E-value=3.5e-06 Score=70.09 Aligned_cols=95 Identities=17% Similarity=0.168 Sum_probs=69.2
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHH
Q psy316 64 WTKVGFIGA----GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLD 138 (341)
Q Consensus 64 ~~kIgiIG~----G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~ 138 (341)
..+|+|||+ |++|..++++|.+.|+ + +|++|+.. +.+ .|+ ...+..++....|+++++||+..+.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~----~--v~~Vnp~~-~~i---~G~~~y~sl~~l~~~vDlvvi~vp~~~~~ 91 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGY----D--VYPVNPKY-EEV---LGRKCYPSVLDIPDKIEVVDLFVKPKLTM 91 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTC----E--EEEECTTC-SEE---TTEECBSSGGGCSSCCSEEEECSCHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCC----E--EEEECCCC-CeE---CCeeccCCHHHcCCCCCEEEEEeCHHHHH
Confidence 578999999 7999999999999985 5 55555543 222 477 6778888777899999999999999
Q ss_pred HHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhcc
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLS 174 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~ 174 (341)
++++++ ... ....++ +..|...+.+.+...
T Consensus 92 ~vv~~~-~~~---gi~~i~--~~~g~~~~~l~~~a~ 121 (144)
T 2d59_A 92 EYVEQA-IKK---GAKVVW--FQYNTYNREASKKAD 121 (144)
T ss_dssp HHHHHH-HHH---TCSEEE--ECTTCCCHHHHHHHH
T ss_pred HHHHHH-HHc---CCCEEE--ECCCchHHHHHHHHH
Confidence 999887 442 233344 345555555655554
No 192
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.17 E-value=2.2e-06 Score=80.89 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=65.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC---------CC--c-cccChHHHhhcCCEEEEee
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP---------MD--F-ALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~---------~g--~-~~~s~~e~~~~aDvIilaV 132 (341)
+||+|||+|.||..++..|...|++ +|.++|+++++++..... .. + .+.+. +.+++||+||+++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~---~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLG---DVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 6899999999999999999998852 599999998766532110 11 2 33565 7799999999998
Q ss_pred --Ch-------------------HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 133 --KP-------------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 133 --~~-------------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
|. ..++++++++ .++. ++.+++-.++.++
T Consensus 81 g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i-~~~~---p~a~iiv~tNP~~ 130 (322)
T 1t2d_A 81 GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHI-KKNC---PNAFIIVVTNPVD 130 (322)
T ss_dssp SCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHH-HHHC---TTSEEEECSSSHH
T ss_pred CCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH-HHHC---CCeEEEEecCChH
Confidence 31 1356666777 6654 5666665556444
No 193
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.17 E-value=2e-06 Score=83.80 Aligned_cols=98 Identities=10% Similarity=0.087 Sum_probs=72.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAIQG 143 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl~~ 143 (341)
.++|+|||+|++|..+++.|...|. +|+++++++.+...... .|....+.+++++.+|+|+++.....+-. .+
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~Ga----~Viv~D~~p~~a~~A~~-~G~~~~sL~eal~~ADVVilt~gt~~iI~--~e 283 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFGA----RVVVTEVDPINALQAAM-EGYQVLLVEDVVEEAHIFVTTTGNDDIIT--SE 283 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHH-TTCEECCHHHHTTTCSEEEECSSCSCSBC--TT
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCC----EEEEECCChhhhHHHHH-hCCeecCHHHHHhhCCEEEECCCCcCccC--HH
Confidence 4789999999999999999999985 89999999877655444 46634588999999999998775433211 12
Q ss_pred hhhcccccCCCcEEEEecCC---CCHHHHHH
Q psy316 144 LVNDKVTLNSSRCIISMLVG---VDLETLKK 171 (341)
Q Consensus 144 i~~~~l~~~~~~iIVs~~ag---i~~~~l~~ 171 (341)
. ...+ +++.+||++..| +..+.+.+
T Consensus 284 ~-l~~M--K~gAIVINvgRg~vEID~~~L~~ 311 (436)
T 3h9u_A 284 H-FPRM--RDDAIVCNIGHFDTEIQVAWLKA 311 (436)
T ss_dssp T-GGGC--CTTEEEEECSSSGGGBCHHHHHH
T ss_pred H-Hhhc--CCCcEEEEeCCCCCccCHHHHHh
Confidence 2 3345 788899988755 34555654
No 194
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.16 E-value=1e-06 Score=82.82 Aligned_cols=84 Identities=15% Similarity=0.168 Sum_probs=63.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC----CCc---cccChHHHhhcCCEEEEeeChHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP----MDF---ALNDNHRIIKEAEYVFLAMKPQYL 137 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~----~g~---~~~s~~e~~~~aDvIilaV~~~~v 137 (341)
++++|||+|.||..+++.|.... +..+|++|||+ +++.+.++ +|+ .. +.++++.++|+||.|+|...
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~--~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~~- 195 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARF--ALEAILVHDPY--ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRSTT- 195 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS--CCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCSS-
T ss_pred cEEEEECccHHHHHHHHHHHHhC--CCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCCC-
Confidence 68999999999999999998742 23689999999 55555442 354 34 88999999999999998742
Q ss_pred HHHHHHhhhcccccCCCcEEEEe
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~ 160 (341)
.++. .+.+ ++++.|+++
T Consensus 196 -pvl~---~~~l--~~G~~V~~v 212 (313)
T 3hdj_A 196 -PLFA---GQAL--RAGAFVGAI 212 (313)
T ss_dssp -CSSC---GGGC--CTTCEEEEC
T ss_pred -cccC---HHHc--CCCcEEEEC
Confidence 2332 2346 788887766
No 195
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.14 E-value=1.2e-05 Score=79.66 Aligned_cols=71 Identities=20% Similarity=0.203 Sum_probs=50.8
Q ss_pred CCeEEEEcccHH--HHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCc-------CC--C--c-cccChHHHhhcCCEEE
Q psy316 64 WTKVGFIGAGNM--AQAVATSLIRTGLCIPAQIIASAPSERFKLHWPE-------PM--D--F-ALNDNHRIIKEAEYVF 129 (341)
Q Consensus 64 ~~kIgiIG~G~m--G~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~-------~~--g--~-~~~s~~e~~~~aDvIi 129 (341)
++||+|||+|.| |.+++..|+...-++.++|.+||+++++++.... .. . + .++|..+++++||+||
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 479999999997 5777888875411223699999999987664221 01 1 2 3456678899999999
Q ss_pred EeeCh
Q psy316 130 LAMKP 134 (341)
Q Consensus 130 laV~~ 134 (341)
++++.
T Consensus 83 iaagv 87 (480)
T 1obb_A 83 NTAMV 87 (480)
T ss_dssp ECCCT
T ss_pred ECCCc
Confidence 99964
No 196
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.11 E-value=7e-06 Score=79.93 Aligned_cols=78 Identities=10% Similarity=0.128 Sum_probs=60.4
Q ss_pred CCeEEEEcccH---HHHHHHHHHHhcCCCCCCeEE--EEcCChhhhhhcCcCCCc----cccChHHHhhc-------CCE
Q psy316 64 WTKVGFIGAGN---MAQAVATSLIRTGLCIPAQII--ASAPSERFKLHWPEPMDF----ALNDNHRIIKE-------AEY 127 (341)
Q Consensus 64 ~~kIgiIG~G~---mG~aia~~L~~~G~~~~~~V~--v~~r~~e~~~~l~~~~g~----~~~s~~e~~~~-------aDv 127 (341)
++||||||+|. ||...+..+...+. .++. +++|++++++.+++++|+ .+.+.++++.+ .|+
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~---~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~ 113 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDH---YELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEA 113 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSC---EEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCC---cEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcE
Confidence 36999999999 99999888877652 3553 789999999988776765 45788888876 899
Q ss_pred EEEeeChHHHHHHHHHh
Q psy316 128 VFLAMKPQYLDSAIQGL 144 (341)
Q Consensus 128 IilaV~~~~v~~vl~~i 144 (341)
|++|+|+....+++...
T Consensus 114 V~I~tp~~~H~~~~~~a 130 (417)
T 3v5n_A 114 VAIVTPNHVHYAAAKEF 130 (417)
T ss_dssp EEECSCTTSHHHHHHHH
T ss_pred EEECCCcHHHHHHHHHH
Confidence 99999987666665443
No 197
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.11 E-value=1.7e-06 Score=83.12 Aligned_cols=85 Identities=11% Similarity=0.111 Sum_probs=64.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cc-------------------------cCh
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-AL-------------------------NDN 118 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~-------------------------~s~ 118 (341)
.||+|||+|.+|..+++.+...|. +|+++||++++++.+.+ +|. .. .+.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa----~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGA----KTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTC----EEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence 589999999999999999999995 89999999998887765 554 21 134
Q ss_pred HHHhhcCCEEEEee--ChH-----HHHHHHHHhhhcccccCCCcEEEEec
Q psy316 119 HRIIKEAEYVFLAM--KPQ-----YLDSAIQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 119 ~e~~~~aDvIilaV--~~~-----~v~~vl~~i~~~~l~~~~~~iIVs~~ 161 (341)
.+.++++|+||.++ |.. ..++.++. + +++.+||+++
T Consensus 260 ~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~-----M--kpGsVIVDvA 302 (381)
T 3p2y_A 260 EDAITKFDIVITTALVPGRPAPRLVTAAAATG-----M--QPGSVVVDLA 302 (381)
T ss_dssp HHHHTTCSEEEECCCCTTSCCCCCBCHHHHHT-----S--CTTCEEEETT
T ss_pred HHHHhcCCEEEECCCCCCcccceeecHHHHhc-----C--CCCcEEEEEe
Confidence 56788999999986 321 12344443 4 7888999875
No 198
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.10 E-value=7.7e-06 Score=76.14 Aligned_cols=95 Identities=16% Similarity=0.251 Sum_probs=65.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh----cCc---CC--C--c-cccChHHHhhcCCEEEEee
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH----WPE---PM--D--F-ALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~----l~~---~~--g--~-~~~s~~e~~~~aDvIilaV 132 (341)
|||+|||+|.||.+++..|...|++ .+|.+||+++++++. +.. .+ . + .+.+ .+++++||+||++.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~--~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaa 77 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV--DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC--SEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECC
Confidence 6899999999999999999998852 489999999987641 111 01 2 2 2345 78899999999997
Q ss_pred C----h------------HHHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 133 K----P------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 133 ~----~------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
. | ..++++.+.+ ..+ .++.+++-.++.+..
T Consensus 78 g~~~kpG~~R~dl~~~N~~i~~~i~~~i-~~~---~p~a~iivvsNPvd~ 123 (294)
T 1oju_A 78 GLARKPGMTRLDLAHKNAGIIKDIAKKI-VEN---APESKILVVTNPMDV 123 (294)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHHHHHHHH-HTT---STTCEEEECSSSHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHHH-Hhh---CCCeEEEEeCCcchH
Confidence 2 2 1133444445 443 467777777776553
No 199
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.09 E-value=3.3e-06 Score=79.38 Aligned_cols=97 Identities=14% Similarity=0.148 Sum_probs=65.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC-------C--Cc-cccChHHHhhcCCEEEEee
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP-------M--DF-ALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~-------~--g~-~~~s~~e~~~~aDvIilaV 132 (341)
+.+||+|||+|.||.+++..|...|. ..+|.++|+++++++....+ . .. ...+..+.+++||+||+++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~--~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~ 82 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGI--ADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICA 82 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTC--CSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC--CCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcC
Confidence 45799999999999999999988874 35899999998765532111 1 12 2234467789999999996
Q ss_pred Ch----------------HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 133 KP----------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 133 ~~----------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
+. ..+.++++.+ .++. ++.+++-.++.+.
T Consensus 83 ~~~~~~g~~r~dl~~~n~~i~~~i~~~i-~~~~---p~a~~iv~tNPv~ 127 (316)
T 1ldn_A 83 GANQKPGETRLDLVDKNIAIFRSIVESV-MASG---FQGLFLVATNPVD 127 (316)
T ss_dssp SCCCCTTTCSGGGHHHHHHHHHHHHHHH-HHHT---CCSEEEECSSSHH
T ss_pred CCCCCCCCCHHHHHHcChHHHHHHHHHH-HHHC---CCCEEEEeCCchH
Confidence 42 2345555666 5554 5555555666544
No 200
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.09 E-value=6.1e-06 Score=77.93 Aligned_cols=97 Identities=16% Similarity=0.218 Sum_probs=67.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh----cCcC-----CCc-cccChHHHhhcCCEEEEeeC
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH----WPEP-----MDF-ALNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~----l~~~-----~g~-~~~s~~e~~~~aDvIilaV~ 133 (341)
.+||+|||+|.||.+++..|+..|++ .+|.++|+++++++. |... .++ ...+..+.+++||+||++..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~--~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGIT--DELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAG 82 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC--ceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecc
Confidence 46899999999999999999998853 489999999887654 3321 123 23344577899999999972
Q ss_pred ----hH------------HHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 134 ----PQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 134 ----~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
|. .++++.+.+ ..+ .++.+|+..++.+.+
T Consensus 83 ~p~kpG~~R~dL~~~N~~Iv~~i~~~I-~~~---~p~a~vlvvtNPvd~ 127 (326)
T 3pqe_A 83 ANQKPGETRLELVEKNLKIFKGIVSEV-MAS---GFDGIFLVATNPVDI 127 (326)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHH-HHT---TCCSEEEECSSSHHH
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHH-HHh---cCCeEEEEcCChHHH
Confidence 21 133444445 443 366777777776553
No 201
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.09 E-value=3.5e-06 Score=80.30 Aligned_cols=81 Identities=10% Similarity=0.049 Sum_probs=61.7
Q ss_pred CC-CeEEEEcccHHHHHHHHHHHhcCCC---C-CCe-EEEEcCChhhhhhcCcCCCc--cccChHHHhh--cCCEEEEee
Q psy316 63 MW-TKVGFIGAGNMAQAVATSLIRTGLC---I-PAQ-IIASAPSERFKLHWPEPMDF--ALNDNHRIIK--EAEYVFLAM 132 (341)
Q Consensus 63 m~-~kIgiIG~G~mG~aia~~L~~~G~~---~-~~~-V~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~--~aDvIilaV 132 (341)
|+ .||||||+|.||...+..|.+...+ . ..+ +.++++++++++.+++++|+ ...|.+++++ +.|+|++|+
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~t 83 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCT 83 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECS
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeC
Confidence 65 4899999999999988887654210 0 013 45899999999998888887 6788899886 589999999
Q ss_pred ChHHHHHHHHH
Q psy316 133 KPQYLDSAIQG 143 (341)
Q Consensus 133 ~~~~v~~vl~~ 143 (341)
|+....++...
T Consensus 84 P~~~H~~~~~~ 94 (390)
T 4h3v_A 84 PGDSHAEIAIA 94 (390)
T ss_dssp CGGGHHHHHHH
T ss_pred ChHHHHHHHHH
Confidence 98765555544
No 202
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.09 E-value=6.5e-06 Score=79.79 Aligned_cols=80 Identities=15% Similarity=0.194 Sum_probs=62.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCC-----CCCCe-EEEEcCChhhhhhcCcCCCc--cccChHHHhh--cCCEEEEeeC
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGL-----CIPAQ-IIASAPSERFKLHWPEPMDF--ALNDNHRIIK--EAEYVFLAMK 133 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~-----~~~~~-V~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~--~aDvIilaV~ 133 (341)
++||||||+|.||...+..|.+.+. ....+ +.++|+++++++++++++|+ .+.|.+++++ +.|+|++|+|
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp 105 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSP 105 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSC
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCC
Confidence 3689999999999999988876431 01123 45899999999999888887 6788899886 5899999999
Q ss_pred hHHHHHHHHH
Q psy316 134 PQYLDSAIQG 143 (341)
Q Consensus 134 ~~~v~~vl~~ 143 (341)
+..-.++...
T Consensus 106 ~~~H~~~~~~ 115 (412)
T 4gqa_A 106 NHLHYTMAMA 115 (412)
T ss_dssp GGGHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 8766665544
No 203
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.08 E-value=5.7e-06 Score=79.09 Aligned_cols=75 Identities=21% Similarity=0.144 Sum_probs=57.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC---cccc---ChHHHhhcCCEEEEeeChHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD---FALN---DNHRIIKEAEYVFLAMKPQYL 137 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g---~~~~---s~~e~~~~aDvIilaV~~~~v 137 (341)
+|||.|||+|.+|+.+++.|.+. ++|++++|+.++++++.+... +-.. +..++++++|+||.|+||..-
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~ 90 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDE-----FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG 90 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-----SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGH
T ss_pred ccEEEEECCCHHHHHHHHHHhcC-----CCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCccc
Confidence 57999999999999999988653 489999999999888766321 1122 234567899999999999765
Q ss_pred HHHHHH
Q psy316 138 DSAIQG 143 (341)
Q Consensus 138 ~~vl~~ 143 (341)
..+++.
T Consensus 91 ~~v~~~ 96 (365)
T 3abi_A 91 FKSIKA 96 (365)
T ss_dssp HHHHHH
T ss_pred chHHHH
Confidence 555544
No 204
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.07 E-value=9.3e-06 Score=76.79 Aligned_cols=79 Identities=10% Similarity=0.137 Sum_probs=62.9
Q ss_pred CCeEEEEccc-HHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc--cccChHHHhh--cCCEEEEeeChHHH
Q psy316 64 WTKVGFIGAG-NMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF--ALNDNHRIIK--EAEYVFLAMKPQYL 137 (341)
Q Consensus 64 ~~kIgiIG~G-~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~--~aDvIilaV~~~~v 137 (341)
++||||||+| .+|...+..|.+.+ +..++ .++++++++++.+++++|+ .+.|.+++++ +.|+|++|+|+...
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~--~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 95 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLS--HLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELN 95 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTT--TTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGGH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCC--CceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchHH
Confidence 4689999999 89999999998752 12354 6899999999988877776 6788888886 58999999998766
Q ss_pred HHHHHHh
Q psy316 138 DSAIQGL 144 (341)
Q Consensus 138 ~~vl~~i 144 (341)
.+++...
T Consensus 96 ~~~~~~a 102 (340)
T 1zh8_A 96 LPFIEKA 102 (340)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665443
No 205
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.05 E-value=1.7e-05 Score=78.13 Aligned_cols=106 Identities=13% Similarity=0.148 Sum_probs=73.5
Q ss_pred CCeEEEEcccHH-HHHHHHHHHh--cCCCCCCeEEEEcCCh--hhhhhcC---c----CC--C--c-cccChHHHhhcCC
Q psy316 64 WTKVGFIGAGNM-AQAVATSLIR--TGLCIPAQIIASAPSE--RFKLHWP---E----PM--D--F-ALNDNHRIIKEAE 126 (341)
Q Consensus 64 ~~kIgiIG~G~m-G~aia~~L~~--~G~~~~~~V~v~~r~~--e~~~~l~---~----~~--g--~-~~~s~~e~~~~aD 126 (341)
++||+|||+|.+ |.+++..|++ .+ ++.++|.+||+++ ++++... . .. . + .+.|..+++++||
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~-l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD 85 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHE-LPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGAD 85 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTT-CCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCC-CCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCC
Confidence 479999999999 8888888887 33 3346899999998 7655411 1 11 2 2 3456678899999
Q ss_pred EEEEeeChH------------------------------------HHHHHHHHhhhcccccCCCcEEEEecCCCCH--HH
Q psy316 127 YVFLAMKPQ------------------------------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL--ET 168 (341)
Q Consensus 127 vIilaV~~~------------------------------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~--~~ 168 (341)
+||++++.. .+.++++.+ ..+ .|+.+++..++.+++ +.
T Consensus 86 ~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i-~~~---~P~a~ii~~tNPvdivT~a 161 (450)
T 1s6y_A 86 FVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDM-EEL---CPDAWLINFTNPAGMVTEA 161 (450)
T ss_dssp EEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHH-HHH---CTTCEEEECSSSHHHHHHH
T ss_pred EEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHH-HHH---CCCeEEEEeCCcHHHHHHH
Confidence 999999842 244555555 554 478888888887764 34
Q ss_pred HHHhcc
Q psy316 169 LKKKLS 174 (341)
Q Consensus 169 l~~~l~ 174 (341)
+.+..+
T Consensus 162 ~~k~~p 167 (450)
T 1s6y_A 162 VLRYTK 167 (450)
T ss_dssp HHHHCC
T ss_pred HHHhCC
Confidence 445444
No 206
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.05 E-value=1.5e-05 Score=76.13 Aligned_cols=77 Identities=8% Similarity=0.061 Sum_probs=61.0
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhcCCCCCCe-EEEEcCChhhhhhcCcCCCc--cccChHHHhhc--CCEEEEeeChHHH
Q psy316 64 WTKVGFIGAGNMAQ-AVATSLIRTGLCIPAQ-IIASAPSERFKLHWPEPMDF--ALNDNHRIIKE--AEYVFLAMKPQYL 137 (341)
Q Consensus 64 ~~kIgiIG~G~mG~-aia~~L~~~G~~~~~~-V~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~~--aDvIilaV~~~~v 137 (341)
++||||||+|.+|. .++..+...+. + +.++++++++++.+++++|. .+.+.++++.+ .|+|++|+|+...
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~----~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H 101 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGA----RLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSER 101 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTC----EEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCc----EEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHH
Confidence 36899999999994 56676666553 5 46899999999988887874 67889998875 8999999998766
Q ss_pred HHHHHHh
Q psy316 138 DSAIQGL 144 (341)
Q Consensus 138 ~~vl~~i 144 (341)
.+++...
T Consensus 102 ~~~~~~a 108 (361)
T 3u3x_A 102 AELAIRA 108 (361)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665443
No 207
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.04 E-value=5.2e-06 Score=79.18 Aligned_cols=81 Identities=17% Similarity=0.187 Sum_probs=58.3
Q ss_pred CC-CeEEEEcccHHHHHHHHHHHhcC----CCCCCe-EEEEcCChhhhhhcCcCCCc--cccChHHHhh--cCCEEEEee
Q psy316 63 MW-TKVGFIGAGNMAQAVATSLIRTG----LCIPAQ-IIASAPSERFKLHWPEPMDF--ALNDNHRIIK--EAEYVFLAM 132 (341)
Q Consensus 63 m~-~kIgiIG~G~mG~aia~~L~~~G----~~~~~~-V~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~--~aDvIilaV 132 (341)
|+ .||||||+|.||..-+..+.... ..+..+ +.++|+++++++.+++++|+ .+.|.+++++ +.|+|++|+
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Iat 102 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTT 102 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECS
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECC
Confidence 43 48999999999998777664321 012234 45899999999999888887 6788899886 579999999
Q ss_pred ChHHHHHHHHH
Q psy316 133 KPQYLDSAIQG 143 (341)
Q Consensus 133 ~~~~v~~vl~~ 143 (341)
|+..-.++...
T Consensus 103 P~~~H~~~a~~ 113 (393)
T 4fb5_A 103 PNQFHAEMAIA 113 (393)
T ss_dssp CGGGHHHHHHH
T ss_pred ChHHHHHHHHH
Confidence 98765555543
No 208
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.02 E-value=3e-05 Score=73.56 Aligned_cols=76 Identities=13% Similarity=0.141 Sum_probs=56.5
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc-cccChHHHhhc--CCEEEEeeChHHHH
Q psy316 64 WTKVGFIGAGNMAQA-VATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF-ALNDNHRIIKE--AEYVFLAMKPQYLD 138 (341)
Q Consensus 64 ~~kIgiIG~G~mG~a-ia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~--aDvIilaV~~~~v~ 138 (341)
++||||||+|.||.. .+..|.+.. ..+| .++++++++++. ...+. .+.|.++++.+ .|+|++|+|+....
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~---~~~l~av~d~~~~~~~~--~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 81 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTP---GLELAGVSSSDASKVHA--DWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHF 81 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTST---TEEEEEEECSCHHHHHT--TCSSCCEESCHHHHHHCSSCCEEEECSCTTTHH
T ss_pred CceEEEECCCHHHHHHHHHHHhhCC---CcEEEEEECCCHHHHHh--hCCCCceECCHHHHhcCCCCCEEEEeCChHHHH
Confidence 478999999999997 777776652 2355 589999988762 21245 67889998875 89999999987655
Q ss_pred HHHHHh
Q psy316 139 SAIQGL 144 (341)
Q Consensus 139 ~vl~~i 144 (341)
+++...
T Consensus 82 ~~~~~a 87 (352)
T 3kux_A 82 PLAQSA 87 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 209
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.01 E-value=9.4e-06 Score=80.67 Aligned_cols=97 Identities=15% Similarity=0.137 Sum_probs=71.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHH-HH-HH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQY-LD-SA 140 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~-v~-~v 140 (341)
..++|+|||+|.||..+++.+...|. +|+++++++++++...+ .|+...+..+++..+|+||++++... +. +.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga----~Viv~d~~~~~~~~A~~-~Ga~~~~l~e~l~~aDvVi~atgt~~~i~~~~ 347 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGA----RVSVTEIDPINALQAMM-EGFDVVTVEEAIGDADIVVTATGNKDIIMLEH 347 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHH-TTCEECCHHHHGGGCSEEEECSSSSCSBCHHH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHH-cCCEEecHHHHHhCCCEEEECCCCHHHHHHHH
Confidence 35789999999999999999998884 89999999988766555 57623466788899999999997544 32 33
Q ss_pred HHHhhhcccccCCCcEEEEecCC---CCHHHHHH
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVG---VDLETLKK 171 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~ag---i~~~~l~~ 171 (341)
++ .+ +++.+|+.+..+ ++...+..
T Consensus 348 l~-----~m--k~ggilvnvG~~~~eId~~aL~~ 374 (494)
T 3ce6_A 348 IK-----AM--KDHAILGNIGHFDNEIDMAGLER 374 (494)
T ss_dssp HH-----HS--CTTCEEEECSSSGGGBCHHHHHH
T ss_pred HH-----hc--CCCcEEEEeCCCCCccCHHHHHH
Confidence 33 34 677788876543 33444443
No 210
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.01 E-value=1.3e-05 Score=78.13 Aligned_cols=88 Identities=11% Similarity=0.039 Sum_probs=66.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHH--HHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYL--DSAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v--~~vl 141 (341)
.++++|||+|++|..+|+.+...|. +|+++++++.+...... .|+...+.+++++.+|+|++++....+ .+.+
T Consensus 247 GKTVgVIG~G~IGr~vA~~lrafGa----~Viv~d~dp~~a~~A~~-~G~~vv~LeElL~~ADIVv~atgt~~lI~~e~l 321 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLAGAGA----RVKVTEVDPICALQAAM-DGFEVVTLDDAASTADIVVTTTGNKDVITIDHM 321 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSHHHHHHHHH-TTCEECCHHHHGGGCSEEEECCSSSSSBCHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC----EEEEEeCCcchhhHHHh-cCceeccHHHHHhhCCEEEECCCCccccCHHHH
Confidence 4789999999999999999998885 99999999876544333 366334788999999999998754332 3444
Q ss_pred HHhhhcccccCCCcEEEEecCC
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag 163 (341)
.. + +++.+||.+.-+
T Consensus 322 ~~-----M--K~GAILINvGRg 336 (464)
T 3n58_A 322 RK-----M--KDMCIVGNIGHF 336 (464)
T ss_dssp HH-----S--CTTEEEEECSSS
T ss_pred hc-----C--CCCeEEEEcCCC
Confidence 44 4 678899887544
No 211
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.01 E-value=2.9e-05 Score=72.01 Aligned_cols=93 Identities=16% Similarity=0.146 Sum_probs=67.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCe-EEEEcCChhhhhhcCcCCCc-cccChHHHhh--cCCEEEEeeChHHH
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQ-IIASAPSERFKLHWPEPMDF-ALNDNHRIIK--EAEYVFLAMKPQYL 137 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~-V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~--~aDvIilaV~~~~v 137 (341)
..+||+|+|+ |+||..+++.|.+.|+ + |+..++ .+.. .+.+|+ .+.+.+++.. ..|++++++|+...
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~----~~V~~V~p--~~~g--~~~~G~~vy~sl~el~~~~~~D~viI~tP~~~~ 77 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGT----KMVGGVTP--GKGG--TTHLGLPVFNTVREAVAATGATASVIYVPAPFC 77 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC----EEEEEECT--TCTT--CEETTEEEESSHHHHHHHHCCCEEEECCCGGGH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC----eEEEEeCC--Cccc--ceeCCeeccCCHHHHhhcCCCCEEEEecCHHHH
Confidence 3578999999 9999999999998884 4 334544 3221 112577 7788888887 89999999999999
Q ss_pred HHHHHHhhhcccccCCCcEEEEecCCCCHHH
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLVGVDLET 168 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~ 168 (341)
.+++.+. ... .-+.+|-++.|++.++
T Consensus 78 ~~~~~ea-~~~----Gi~~iVi~t~G~~~~~ 103 (288)
T 2nu8_A 78 KDSILEA-IDA----GIKLIITITEGIPTLD 103 (288)
T ss_dssp HHHHHHH-HHT----TCSEEEECCCCCCHHH
T ss_pred HHHHHHH-HHC----CCCEEEEECCCCCHHH
Confidence 8888776 321 1245555777888754
No 212
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=98.01 E-value=7.7e-06 Score=72.69 Aligned_cols=78 Identities=19% Similarity=0.121 Sum_probs=55.5
Q ss_pred CCeEEEEcccHHHHHHHHH--HHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATS--LIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~--L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~v 140 (341)
.++|+|||+|++|.++++. +...|+ .-+.++|+++++........++ ...+..+.+++.|++++|+|.....++
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~---~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs~~~~ei 161 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNT---KISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAVAAQSI 161 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------C---CEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCHHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCc---EEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCchhHHHH
Confidence 4689999999999999994 223343 3456899999887765443444 456777877666999999999877777
Q ss_pred HHHh
Q psy316 141 IQGL 144 (341)
Q Consensus 141 l~~i 144 (341)
+..+
T Consensus 162 ~~~l 165 (215)
T 2vt3_A 162 TDRL 165 (215)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7766
No 213
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.00 E-value=4.9e-06 Score=77.53 Aligned_cols=69 Identities=17% Similarity=0.131 Sum_probs=54.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc------cccChHHHhhcCCEEEEeeChH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF------ALNDNHRIIKEAEYVFLAMKPQ 135 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~------~~~s~~e~~~~aDvIilaV~~~ 135 (341)
.+++.|||+|.||.+++..|.+.|. .+|++++|++++++.+.++++. ...+..+.+.++|+||.|+|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~---~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~ 215 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAA---ERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVG 215 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC---SEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTT
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCC---CEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCC
Confidence 4689999999999999999999984 4899999999998877654432 1123445667899999998854
No 214
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.00 E-value=6.4e-06 Score=79.29 Aligned_cols=87 Identities=15% Similarity=0.090 Sum_probs=64.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-c------ccChHHHhhcCCEEEEeeC-hH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-A------LNDNHRIIKEAEYVFLAMK-PQ 135 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~------~~s~~e~~~~aDvIilaV~-~~ 135 (341)
.++|+|||+|.+|..+++.+...|. +|++++|++++++.+.+.+|. . ..+..+.+..+|+||.|+. |.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga----~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~ 243 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGA----TVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG 243 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----EEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC
Confidence 4789999999999999999999884 899999999887766553443 1 2234567789999999885 22
Q ss_pred H------HHHHHHHhhhcccccCCCcEEEEec
Q psy316 136 Y------LDSAIQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 136 ~------v~~vl~~i~~~~l~~~~~~iIVs~~ 161 (341)
. .++.++ .+ +++.+||++.
T Consensus 244 ~~t~~li~~~~l~-----~m--k~g~~iV~va 268 (377)
T 2vhw_A 244 AKAPKLVSNSLVA-----HM--KPGAVLVDIA 268 (377)
T ss_dssp SCCCCCBCHHHHT-----TS--CTTCEEEEGG
T ss_pred CCCcceecHHHHh-----cC--CCCcEEEEEe
Confidence 1 233333 34 6778888875
No 215
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.00 E-value=8.3e-06 Score=78.97 Aligned_cols=85 Identities=12% Similarity=0.130 Sum_probs=64.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cc----------------------------
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-AL---------------------------- 115 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~---------------------------- 115 (341)
.||+|||+|.+|..+++.+...|. +|+++|+++++++.+.+ +|. ..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa----~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~ 265 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGA----VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ 265 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSTTHHHHHHH-TTCEECCCCC-----------------CHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccchhhhcchhhhhhh
Confidence 589999999999999999999995 89999999988776655 443 11
Q ss_pred -cChHHHhhcCCEEEEee--ChH-----HHHHHHHHhhhcccccCCCcEEEEec
Q psy316 116 -NDNHRIIKEAEYVFLAM--KPQ-----YLDSAIQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 116 -~s~~e~~~~aDvIilaV--~~~-----~v~~vl~~i~~~~l~~~~~~iIVs~~ 161 (341)
.+..+.++++|+||.++ |.. .-++.++ .+ +++.+||+++
T Consensus 266 ~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~-----~M--k~GsVIVDvA 312 (405)
T 4dio_A 266 AALVAEHIAKQDIVITTALIPGRPAPRLVTREMLD-----SM--KPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHT-----TS--CTTCEEEETT
T ss_pred HhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHh-----cC--CCCCEEEEEe
Confidence 13466788999999986 321 1233333 34 7899999886
No 216
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.00 E-value=1.6e-05 Score=78.86 Aligned_cols=95 Identities=16% Similarity=0.219 Sum_probs=71.4
Q ss_pred ccCCCCCcCCCCCCCCcccCCCCC-CCeEEEEcc----cHHHHHHHHHHHhc-CCCCCCeE-EEEcCChhhhhhcCcCCC
Q psy316 40 HTGARPVRKSDMGMEDSVEHHVPM-WTKVGFIGA----GNMAQAVATSLIRT-GLCIPAQI-IASAPSERFKLHWPEPMD 112 (341)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~m-~~kIgiIG~----G~mG~aia~~L~~~-G~~~~~~V-~v~~r~~e~~~~l~~~~g 112 (341)
|+...-.+.|.+.-.++ | ++||||||+ |.||...+..|.+. . ..+| .++++++++++.+++++|
T Consensus 20 ~~~~~~~~~~~~~~~~~------m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~---~~~lvav~d~~~~~a~~~a~~~g 90 (479)
T 2nvw_A 20 HMLANNNKRSKLSTVPS------SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSS---QFQIVALYNPTLKSSLQTIEQLQ 90 (479)
T ss_dssp CCCCCCCTTSGGGSSGG------GCCEEEEEECCCSTTSHHHHTHHHHHHHTTT---TEEEEEEECSCHHHHHHHHHHTT
T ss_pred HHHhhccccccCCCCCC------CCcCEEEEEcccCCCCHHHHHHHHHHHhcCC---CeEEEEEEeCCHHHHHHHHHHcC
Confidence 67776666666633331 3 368999999 99999999999875 2 1354 589999999988877676
Q ss_pred c----cccChHHHhh--cCCEEEEeeChHHHHHHHHH
Q psy316 113 F----ALNDNHRIIK--EAEYVFLAMKPQYLDSAIQG 143 (341)
Q Consensus 113 ~----~~~s~~e~~~--~aDvIilaV~~~~v~~vl~~ 143 (341)
+ .+.+.+++++ +.|+|++|+|+....+++..
T Consensus 91 ~~~~~~~~d~~ell~~~~vD~V~I~tp~~~H~~~~~~ 127 (479)
T 2nvw_A 91 LKHATGFDSLESFAQYKDIDMIVVSVKVPEHYEVVKN 127 (479)
T ss_dssp CTTCEEESCHHHHHHCTTCSEEEECSCHHHHHHHHHH
T ss_pred CCcceeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHH
Confidence 4 4678888886 68999999998766555544
No 217
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.99 E-value=2.7e-05 Score=72.07 Aligned_cols=99 Identities=12% Similarity=0.045 Sum_probs=67.3
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhh-----hhhcC--cCCCc-cccChHHHhhcCCEEEEee
Q psy316 63 MWTKVGFIG-AGNMAQAVATSLIRTGLCIPAQI-IASAPSERF-----KLHWP--EPMDF-ALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 63 m~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~-----~~~l~--~~~g~-~~~s~~e~~~~aDvIilaV 132 (341)
+++||+|+| +|+||+.+++.+.+.. ..++ .+++|++.. +..+. ...|+ ++.+.++++.++|+||-++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~---~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT 96 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRK---DVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFS 96 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCS---SEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECS
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCC---CCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcC
Confidence 457999999 8999999999887652 2344 467886422 11221 12467 7788999899999999999
Q ss_pred ChHHHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHH
Q psy316 133 KPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLK 170 (341)
Q Consensus 133 ~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~ 170 (341)
+|....+.+... + ..+.-+|..+.|.+.++++
T Consensus 97 ~p~a~~~~~~~~----l--~~Gv~vViGTTG~~~e~~~ 128 (288)
T 3ijp_A 97 QPQASVLYANYA----A--QKSLIHIIGTTGFSKTEEA 128 (288)
T ss_dssp CHHHHHHHHHHH----H--HHTCEEEECCCCCCHHHHH
T ss_pred CHHHHHHHHHHH----H--HcCCCEEEECCCCCHHHHH
Confidence 998877666554 2 2344455555788865543
No 218
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.96 E-value=1.2e-05 Score=76.37 Aligned_cols=77 Identities=14% Similarity=0.146 Sum_probs=55.1
Q ss_pred CCCeEEEEcccHHHH-HHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcC---CCc-cccChHHHhhc--CCEEEEeeCh
Q psy316 63 MWTKVGFIGAGNMAQ-AVATSLIRTGLCIPAQI-IASAPSERFKLHWPEP---MDF-ALNDNHRIIKE--AEYVFLAMKP 134 (341)
Q Consensus 63 m~~kIgiIG~G~mG~-aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~---~g~-~~~s~~e~~~~--aDvIilaV~~ 134 (341)
|++||||||+|.||. ..+..|.+. +..+| .+++|+ +.+.+.++ .++ .+.+.++++.+ .|+|++|+|+
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~---~~~~l~av~d~~--~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIR---ETLEVKTIFDLH--VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPA 75 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTC---TTEEEEEEECTT--CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCG
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhC---CCeEEEEEECCC--HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCc
Confidence 678999999999998 455555543 22455 488987 44444443 355 67888998875 8999999998
Q ss_pred HHHHHHHHHh
Q psy316 135 QYLDSAIQGL 144 (341)
Q Consensus 135 ~~v~~vl~~i 144 (341)
....+++...
T Consensus 76 ~~h~~~~~~a 85 (349)
T 3i23_A 76 HTHYDLAKQA 85 (349)
T ss_dssp GGHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7666655443
No 219
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.96 E-value=1.3e-05 Score=75.30 Aligned_cols=98 Identities=15% Similarity=0.186 Sum_probs=67.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC------C--Cc-cccChHHHhhcCCEEEEeeC
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP------M--DF-ALNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~------~--g~-~~~s~~e~~~~aDvIilaV~ 133 (341)
..+||+|||+|.+|.+++..|+..+++ .+|.++|+++++++....+ + .+ ...+..+++++||+||++..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~--~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIA--EEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAG 81 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCC--CEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCC
Confidence 357999999999999999999988853 5899999998776632111 1 22 22345677999999999984
Q ss_pred ----h------------HHHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 134 ----P------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 134 ----~------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
| ..++++.+.+ ..+ .++.+|+..++.+..
T Consensus 82 ~~~~~g~~R~dl~~~n~~i~~~i~~~i-~~~---~p~a~iiv~tNPv~~ 126 (318)
T 1ez4_A 82 APQKPGESRLDLVNKNLNILSSIVKPV-VDS---GFDGIFLVAANPVDI 126 (318)
T ss_dssp C----------CHHHHHHHHHHHHHHH-HHT---TCCSEEEECSSSHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHH-HHh---CCCeEEEEeCCcHHH
Confidence 2 2244455555 444 356666667666553
No 220
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.95 E-value=2.4e-05 Score=76.65 Aligned_cols=77 Identities=16% Similarity=0.198 Sum_probs=58.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCc---CCC---c-ccc----ChHHHhh--cCCEEE
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPE---PMD---F-ALN----DNHRIIK--EAEYVF 129 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~---~~g---~-~~~----s~~e~~~--~aDvIi 129 (341)
++||||||+|.||...+..|.+.. ..+| .++++++++++.+++ ++| . ... +.+++++ +.|+|+
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~---~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~ 96 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRD---DVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVF 96 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCT---TEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEE
T ss_pred CceEEEEecCHHHHHHHHHHHhCC---CcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEE
Confidence 369999999999999999887642 2354 589999998887654 234 4 456 8888887 589999
Q ss_pred EeeChHHHHHHHHH
Q psy316 130 LAMKPQYLDSAIQG 143 (341)
Q Consensus 130 laV~~~~v~~vl~~ 143 (341)
+|+|+....+++..
T Consensus 97 i~tp~~~h~~~~~~ 110 (444)
T 2ixa_A 97 VSSPWEWHHEHGVA 110 (444)
T ss_dssp ECCCGGGHHHHHHH
T ss_pred EcCCcHHHHHHHHH
Confidence 99998766555544
No 221
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.94 E-value=3.6e-05 Score=63.95 Aligned_cols=95 Identities=9% Similarity=0.003 Sum_probs=60.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCC-hhhhhhcCc--CCCc--cc---cCh---HHH-hhcCCEEEEe
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPS-ERFKLHWPE--PMDF--AL---NDN---HRI-IKEAEYVFLA 131 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~-~e~~~~l~~--~~g~--~~---~s~---~e~-~~~aDvIila 131 (341)
.++|.|+|+|.+|+.+++.|.+.|+ +|++.+++ +++.+.+.+ ..|+ .. .+. .++ +.++|+||++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~----~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQ----NVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC----CEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC----CEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 3679999999999999999999984 89999997 454444432 1233 11 222 233 6789999999
Q ss_pred eChHHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 132 MKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 132 V~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
++++.....+... ...+ .+...|+.......
T Consensus 79 ~~~d~~n~~~~~~-a~~~--~~~~~ii~~~~~~~ 109 (153)
T 1id1_A 79 SDNDADNAFVVLS-AKDM--SSDVKTVLAVSDSK 109 (153)
T ss_dssp SSCHHHHHHHHHH-HHHH--TSSSCEEEECSSGG
T ss_pred cCChHHHHHHHHH-HHHH--CCCCEEEEEECCHH
Confidence 9876655444333 3333 34433444434433
No 222
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.94 E-value=1.1e-05 Score=75.77 Aligned_cols=95 Identities=17% Similarity=0.279 Sum_probs=64.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh----cCc-----CCCc-cc-cChHHHhhcCCEEEEeeC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH----WPE-----PMDF-AL-NDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~----l~~-----~~g~-~~-~s~~e~~~~aDvIilaV~ 133 (341)
|||+|||+|.||.+++..|+..|+ ..+|.++|+++++++. +.. .... .. .+..+.+++||+||++..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~--~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDV--AKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAG 78 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--SSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--CCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCC
Confidence 689999999999999999999885 3589999999877552 211 0122 22 355678999999999973
Q ss_pred ----hH------------HHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 134 ----PQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 134 ----~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
|. .++++.+.+ ..+ .++.+++..++.+.
T Consensus 79 ~~~kpG~~R~dl~~~N~~i~~~i~~~i-~~~---~p~a~vivvtNPvd 122 (314)
T 3nep_X 79 LPRSPGMSRDDLLAKNTEIVGGVTEQF-VEG---SPDSTIIVVANPLD 122 (314)
T ss_dssp C-------CHHHHHHHHHHHHHHHHHH-HTT---CTTCEEEECCSSHH
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHH-HHh---CCCcEEEecCCchh
Confidence 21 123333444 443 46777777777655
No 223
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.94 E-value=1.1e-05 Score=77.41 Aligned_cols=81 Identities=14% Similarity=0.059 Sum_probs=61.1
Q ss_pred CCeEEEEc-ccHHHHH-HH----HHHHhcCCCC---CCeE----EEEcCChhhhhhcCcCCCc--cccChHHHhhc--CC
Q psy316 64 WTKVGFIG-AGNMAQA-VA----TSLIRTGLCI---PAQI----IASAPSERFKLHWPEPMDF--ALNDNHRIIKE--AE 126 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~a-ia----~~L~~~G~~~---~~~V----~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~~--aD 126 (341)
++|||||| +|.||.. .+ ..+.+.+.+. ...+ .+++|++++++.+++++|+ .+.|.++++++ .|
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD 85 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDT 85 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCC
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCC
Confidence 46899999 9999998 77 7777665211 1112 4999999999998887887 56889998875 89
Q ss_pred EEEEeeChHHHHHHHHHh
Q psy316 127 YVFLAMKPQYLDSAIQGL 144 (341)
Q Consensus 127 vIilaV~~~~v~~vl~~i 144 (341)
+|++|+|+....+++...
T Consensus 86 ~V~i~tp~~~h~~~~~~a 103 (383)
T 3oqb_A 86 MFFDAATTQARPGLLTQA 103 (383)
T ss_dssp EEEECSCSSSSHHHHHHH
T ss_pred EEEECCCchHHHHHHHHH
Confidence 999999986555555443
No 224
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.93 E-value=3.8e-05 Score=70.64 Aligned_cols=98 Identities=13% Similarity=0.158 Sum_probs=67.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEE-EEcCChhhh-----hhcCc-CCCc-cccChHHHhhcCCEEEEeeChH
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCIPAQII-ASAPSERFK-----LHWPE-PMDF-ALNDNHRIIKEAEYVFLAMKPQ 135 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~-v~~r~~e~~-----~~l~~-~~g~-~~~s~~e~~~~aDvIilaV~~~ 135 (341)
+||+|+| +|+||+.+++.+.+.. ..++. +++|++... ..+.. ..|+ ...+.++++.++|+||-+++|.
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~---~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p~ 84 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAP---DATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPE 84 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCT---TEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCC---CCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCHH
Confidence 7999999 8999999999998753 23554 578864321 11111 1155 6778888889999999999999
Q ss_pred HHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHH
Q psy316 136 YLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKK 171 (341)
Q Consensus 136 ~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~ 171 (341)
...+.+... . ..+.-+|..+.|.+.+++++
T Consensus 85 a~~~~~~~a-l-----~~G~~vVigTTG~s~~~~~~ 114 (272)
T 4f3y_A 85 GTLVHLDAA-L-----RHDVKLVIGTTGFSEPQKAQ 114 (272)
T ss_dssp HHHHHHHHH-H-----HHTCEEEECCCCCCHHHHHH
T ss_pred HHHHHHHHH-H-----HcCCCEEEECCCCCHHHHHH
Confidence 887777654 2 23444454557888765543
No 225
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.93 E-value=2.3e-05 Score=75.69 Aligned_cols=78 Identities=12% Similarity=0.088 Sum_probs=61.8
Q ss_pred CCeEEEEcccH---HHHHHHHHHHhcCCCCCCeEE--EEcCChhhhhhcCcCCCc----cccChHHHhhc-------CCE
Q psy316 64 WTKVGFIGAGN---MAQAVATSLIRTGLCIPAQII--ASAPSERFKLHWPEPMDF----ALNDNHRIIKE-------AEY 127 (341)
Q Consensus 64 ~~kIgiIG~G~---mG~aia~~L~~~G~~~~~~V~--v~~r~~e~~~~l~~~~g~----~~~s~~e~~~~-------aDv 127 (341)
++||||||+|. ||...+..+...+. .++. ++++++++++.+.+++|+ .+.|.++++.+ .|+
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~---~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~ 88 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNT---FVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQA 88 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGS---EEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCC---eEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCE
Confidence 36899999999 99999988877652 3554 689999999988877776 46788888865 899
Q ss_pred EEEeeChHHHHHHHHHh
Q psy316 128 VFLAMKPQYLDSAIQGL 144 (341)
Q Consensus 128 IilaV~~~~v~~vl~~i 144 (341)
|++|+|+....+++...
T Consensus 89 V~i~tp~~~H~~~~~~a 105 (398)
T 3dty_A 89 VSIATPNGTHYSITKAA 105 (398)
T ss_dssp EEEESCGGGHHHHHHHH
T ss_pred EEECCCcHHHHHHHHHH
Confidence 99999987666655443
No 226
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.93 E-value=8.6e-06 Score=79.06 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=56.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-c--ccChHHHhhcCCEEEEeeCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-A--LNDNHRIIKEAEYVFLAMKP 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~--~~s~~e~~~~aDvIilaV~~ 134 (341)
.++|+|||+|.||..+++.|...|. .+|++++|++++++.+.+++|. . ..+..+.+..+|+||.|++.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~---~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~ 237 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGV---RAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAA 237 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCC---SEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCC---CEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCC
Confidence 4689999999999999999998884 4899999999888666655665 2 34566778899999999974
No 227
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.93 E-value=1.7e-05 Score=77.21 Aligned_cols=88 Identities=14% Similarity=0.152 Sum_probs=66.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeCh-HHHH-HHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKP-QYLD-SAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~-~~v~-~vl 141 (341)
.++++|||+|.+|..+++.|...|. +|+++++++.+...... .|....+..+++..+|+|++|.-. ..+. +.+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga----~Viv~D~dp~ra~~A~~-~G~~v~~Leeal~~ADIVi~atgt~~lI~~e~l 294 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGS----IVYVTEIDPICALQACM-DGFRLVKLNEVIRQVDIVITCTGNKNVVTREHL 294 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHH-TTCEECCHHHHTTTCSEEEECSSCSCSBCHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCC----EEEEEeCChhhhHHHHH-cCCEeccHHHHHhcCCEEEECCCCcccCCHHHH
Confidence 4789999999999999999999885 89999999876554433 365345788999999999997432 2222 444
Q ss_pred HHhhhcccccCCCcEEEEecCC
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag 163 (341)
..+ +++.+||.+..|
T Consensus 295 ~~M-------K~gailINvgrg 309 (435)
T 3gvp_A 295 DRM-------KNSCIVCNMGHS 309 (435)
T ss_dssp HHS-------CTTEEEEECSST
T ss_pred Hhc-------CCCcEEEEecCC
Confidence 444 678899988655
No 228
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.91 E-value=2.5e-05 Score=74.57 Aligned_cols=75 Identities=11% Similarity=0.153 Sum_probs=56.0
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCC-Cc-cccChHHHhh--cCCEEEEeeChHHH
Q psy316 64 WTKVGFIGAGNMAQA-VATSLIRTGLCIPAQI-IASAPSERFKLHWPEPM-DF-ALNDNHRIIK--EAEYVFLAMKPQYL 137 (341)
Q Consensus 64 ~~kIgiIG~G~mG~a-ia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~-g~-~~~s~~e~~~--~aDvIilaV~~~~v 137 (341)
++||||||+|.||.. .+..|.+.. ..+| .++++++++++. . + +. .+.+.++++. +.|+|++|+|+...
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~---~~~l~av~d~~~~~~~~--~-~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H 80 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVP---GLNLAFVASRDEEKVKR--D-LPDVTVIASPEAAVQHPDVDLVVIASPNATH 80 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTST---TEEEEEEECSCHHHHHH--H-CTTSEEESCHHHHHTCTTCSEEEECSCGGGH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCC---CeEEEEEEcCCHHHHHh--h-CCCCcEECCHHHHhcCCCCCEEEEeCChHHH
Confidence 468999999999996 666666542 2355 589999987652 2 3 45 6788899887 78999999998766
Q ss_pred HHHHHHh
Q psy316 138 DSAIQGL 144 (341)
Q Consensus 138 ~~vl~~i 144 (341)
.+++...
T Consensus 81 ~~~~~~a 87 (364)
T 3e82_A 81 APLARLA 87 (364)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655443
No 229
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.91 E-value=9e-06 Score=77.02 Aligned_cols=101 Identities=18% Similarity=0.255 Sum_probs=71.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeCh-HHHHHHH-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKP-QYLDSAI- 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~-~~v~~vl- 141 (341)
.+++||||+|++|+.+++.+..-|. +|..|+|.+.. ...+ .++...+.++++++||+|.+.+|- ...+.++
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~fg~----~v~~~d~~~~~--~~~~-~~~~~~~l~ell~~sDivslh~Plt~~T~~li~ 213 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAFGM----KVLCYDVVKRE--DLKE-KGCVYTSLDELLKESDVISLHVPYTKETHHMIN 213 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCCH--HHHH-TTCEECCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred CcEEEEECcchHHHHHHHhhcccCc----eeeecCCccch--hhhh-cCceecCHHHHHhhCCEEEEcCCCChhhccCcC
Confidence 4789999999999999999988885 99999986432 1222 344445789999999999999984 2222233
Q ss_pred HHhhhcccccCCCcEEEEecCC--CCHHHHHHhcc
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG--VDLETLKKKLS 174 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag--i~~~~l~~~l~ 174 (341)
++. ...+ +++.++|.++=| +..+.|.+.+.
T Consensus 214 ~~~-l~~m--k~~a~lIN~aRG~iVde~aL~~aL~ 245 (334)
T 3kb6_A 214 EER-ISLM--KDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp HHH-HHHS--CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHH-Hhhc--CCCeEEEecCccccccHHHHHHHHH
Confidence 111 2234 788899988755 34566766665
No 230
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.90 E-value=1.3e-05 Score=75.32 Aligned_cols=96 Identities=13% Similarity=0.153 Sum_probs=62.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh----cCcC--C--Cc-cccChHHHhhcCCEEEEeeCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH----WPEP--M--DF-ALNDNHRIIKEAEYVFLAMKP 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~----l~~~--~--g~-~~~s~~e~~~~aDvIilaV~~ 134 (341)
++||+|||+|.+|.+++..|...++ ..+|.++|+++++++. +... + .+ ...+..+++++||+||++++.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~--~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~ 84 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQT--ANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGA 84 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC--SSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--CCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCC
Confidence 4799999999999999999999885 2489999999876542 2221 1 22 222346678999999999852
Q ss_pred HH----------------HHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 135 QY----------------LDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 135 ~~----------------v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
.. +.++.+.+ .++ .++.+|+-.++.+.
T Consensus 85 p~k~g~~r~dl~~~n~~i~~~i~~~i-~~~---~p~a~viv~tNPv~ 127 (318)
T 1y6j_A 85 NRKPGETRLDLAKKNVMIAKEVTQNI-MKY---YNHGVILVVSNPVD 127 (318)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHH-HHH---CCSCEEEECSSSHH
T ss_pred CCCCCcCHHHHHHhhHHHHHHHHHHH-HHh---CCCcEEEEecCcHH
Confidence 11 45666666 554 35666665656544
No 231
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.89 E-value=2.5e-05 Score=73.41 Aligned_cols=96 Identities=15% Similarity=0.126 Sum_probs=65.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhc----Cc---CC--Cc-cccChHHHhhcCCEEEEeeC
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHW----PE---PM--DF-ALNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l----~~---~~--g~-~~~s~~e~~~~aDvIilaV~ 133 (341)
++||+|||+|.+|.+++..|...|+ ..+|.++|+++++++.. .. .. .+ ...+..+++++||+||++++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~--~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSI--VDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAG 83 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCS--CSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--CCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCC
Confidence 4699999999999999999998875 25899999998665521 11 01 22 22245677999999999983
Q ss_pred ----h------------HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 134 ----P------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 134 ----~------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
+ ..++++.+.+ .++ .++.+|+..++.+.
T Consensus 84 ~~~~~g~~r~dl~~~n~~i~~~i~~~i-~~~---~p~a~viv~tNPv~ 127 (317)
T 3d0o_A 84 AAQKPGETRLDLVSKNLKIFKSIVGEV-MAS---KFDGIFLVATNPVD 127 (317)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHH-HHT---TCCSEEEECSSSHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHH-HHh---CCCcEEEEecCcHH
Confidence 2 2244555555 554 35666665666544
No 232
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.87 E-value=1.6e-05 Score=74.91 Aligned_cols=94 Identities=20% Similarity=0.281 Sum_probs=64.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh----cCcC-----CC--c-cccChHHHhhcCCEEEEe
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH----WPEP-----MD--F-ALNDNHRIIKEAEYVFLA 131 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~----l~~~-----~g--~-~~~s~~e~~~~aDvIila 131 (341)
.+||+|||+|.||.+++..|...|+ . +|.++|+++++++. +... .. + .+.+ .+++++||+||++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~--~-~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d-~~a~~~aDiVIia 82 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKEL--G-DVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND-YAAIEGADVVIVT 82 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--C-EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS-GGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--C-eEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC-HHHHCCCCEEEEc
Confidence 3699999999999999999999885 2 89999999876642 2110 12 2 2344 4789999999999
Q ss_pred eC----hH------------HHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 132 MK----PQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 132 V~----~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
.. |. .++++.+.+ ..+ .++.+++..++.+.
T Consensus 83 ag~p~k~G~~R~dl~~~N~~i~~~i~~~i-~~~---~p~a~iivvtNPvd 128 (324)
T 3gvi_A 83 AGVPRKPGMSRDDLLGINLKVMEQVGAGI-KKY---APEAFVICITNPLD 128 (324)
T ss_dssp CSCCCC-----CHHHHHHHHHHHHHHHHH-HHH---CTTCEEEECCSSHH
T ss_pred cCcCCCCCCCHHHHHHhhHHHHHHHHHHH-HHH---CCCeEEEecCCCcH
Confidence 62 21 133444455 444 46777777777655
No 233
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.87 E-value=2.6e-05 Score=72.93 Aligned_cols=92 Identities=14% Similarity=0.178 Sum_probs=63.9
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC---------CC--c-cccChHHHhhcCCEEEEeeC
Q psy316 66 KVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP---------MD--F-ALNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 66 kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~---------~g--~-~~~s~~e~~~~aDvIilaV~ 133 (341)
||+|||+|.||.+++..|+..++ .+|.++|+++++++....+ .. + .+.+. +.+++||+||++..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l---~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY---DDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC---SCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHhCCC---CEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCC
Confidence 79999999999999999988874 4799999998766532111 12 2 22454 67899999999963
Q ss_pred hH----------------HHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 134 PQ----------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 134 ~~----------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
.. .++++++++ ..+. ++.+++..++.+.
T Consensus 77 ~~~k~G~~r~dl~~~n~~i~~~i~~~i-~~~~---p~a~iiv~tNPv~ 120 (308)
T 2d4a_B 77 IGRKPGMTREQLLEANANTMADLAEKI-KAYA---KDAIVVITTNPVD 120 (308)
T ss_dssp CCCCSSCCTHHHHHHHHHHHHHHHHHH-HHHC---TTCEEEECCSSHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHH-HHHC---CCeEEEEeCCchH
Confidence 21 256666666 5543 5656665666544
No 234
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.86 E-value=4.7e-05 Score=72.46 Aligned_cols=74 Identities=9% Similarity=0.052 Sum_probs=55.5
Q ss_pred CeEEEEcccHHHHH-HHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCC-Cc-cccChHHHhhc--CCEEEEeeChHHHH
Q psy316 65 TKVGFIGAGNMAQA-VATSLIRTGLCIPAQI-IASAPSERFKLHWPEPM-DF-ALNDNHRIIKE--AEYVFLAMKPQYLD 138 (341)
Q Consensus 65 ~kIgiIG~G~mG~a-ia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~-g~-~~~s~~e~~~~--aDvIilaV~~~~v~ 138 (341)
+||||||+|.||.. .+..|.+.. ..+| .+++++++++ ++++ ++ .+.|.++++.+ .|+|++|+|+....
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~---~~~l~av~d~~~~~~---~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 79 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNP---HFELYKIVERSKELS---KERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHY 79 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCT---TEEEEEEECSSCCGG---GTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHH
T ss_pred eEEEEECCCHHHHHHHHHHHhhCC---CeEEEEEEcCCHHHH---HHhCCCCceECCHHHHhcCCCCCEEEEeCChHHHH
Confidence 68999999999997 677776652 2355 5899998763 3446 45 77888999876 89999999987666
Q ss_pred HHHHHh
Q psy316 139 SAIQGL 144 (341)
Q Consensus 139 ~vl~~i 144 (341)
+++...
T Consensus 80 ~~~~~a 85 (362)
T 3fhl_A 80 EYAGMA 85 (362)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
No 235
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.85 E-value=2.2e-05 Score=73.34 Aligned_cols=93 Identities=12% Similarity=0.199 Sum_probs=63.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhh----hcCcC--CCc-cccChHHHhhcCCEEEEee-----
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKL----HWPEP--MDF-ALNDNHRIIKEAEYVFLAM----- 132 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~----~l~~~--~g~-~~~s~~e~~~~aDvIilaV----- 132 (341)
+||+|||+|+||..++..|+..|+ ..+|.++|++++ +. .+..- -.+ .+.+. +.+++||+||++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~--~~ev~L~Di~~~-~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~p 90 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGI--ADRLVLLDLSEG-TKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGS 90 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--CSEEEEECCC------CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHhcCC--CCEEEEEcCCcc-hHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCC
Confidence 689999999999999999999885 358999999875 22 11110 123 34565 7789999999997
Q ss_pred --------Ch--HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 133 --------KP--QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 133 --------~~--~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
.- ..+.++++++ ..+. ++.+++..++.++
T Consensus 91 G~tR~dl~~~n~~i~~~i~~~i-~~~~---p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 91 SQSYLDVVQSNVDMFRALVPAL-GHYS---QHSVLLVASQPVE 129 (303)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHH-HHHT---TTCEEEECSSSHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHH-HHhC---CCeEEEEcCChHH
Confidence 11 2356666776 6554 6667766777554
No 236
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.85 E-value=2e-05 Score=74.56 Aligned_cols=76 Identities=14% Similarity=0.187 Sum_probs=54.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCC------------------c-cccChHHHh
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMD------------------F-ALNDNHRII 122 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g------------------~-~~~s~~e~~ 122 (341)
|++||||||+|.||..+++.|.+... .+| .+++++++++..+.+.+| + ...+..+++
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~---~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~ 77 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDD---MELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL 77 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTT---EEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCC---CEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhc
Confidence 55799999999999999999987532 344 567887776654443232 1 234677777
Q ss_pred hcCCEEEEeeChHHHHHHH
Q psy316 123 KEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 123 ~~aDvIilaV~~~~v~~vl 141 (341)
.+.|+||+|+|+....+..
T Consensus 78 ~~vDvV~~aTp~~~h~~~a 96 (334)
T 2czc_A 78 EKVDIIVDATPGGIGAKNK 96 (334)
T ss_dssp TTCSEEEECCSTTHHHHHH
T ss_pred cCCCEEEECCCccccHHHH
Confidence 8999999999986544433
No 237
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.84 E-value=4.7e-05 Score=71.83 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=66.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh----cCcC----CCc-cccChHHHhhcCCEEEEeeC
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH----WPEP----MDF-ALNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~----l~~~----~g~-~~~s~~e~~~~aDvIilaV~ 133 (341)
..+||+|||+|.+|.+++..|+..+++ .+|.++|+++++++. +... ..+ ...+..+++++||+||++..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~--~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIA--QEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAG 85 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCC--CEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCC
Confidence 347999999999999999999888753 589999999877653 2211 122 22345677999999999973
Q ss_pred ----h------------HHHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 134 ----P------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 134 ----~------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
| ..++++.+.+ ..+ .++.+|+..++.+..
T Consensus 86 ~~~k~g~~R~dl~~~n~~i~~~i~~~i-~~~---~p~a~iiv~tNPv~~ 130 (326)
T 2zqz_A 86 APQKPGETRLDLVNKNLKILKSIVDPI-VDS---GFNGIFLVAANPVDI 130 (326)
T ss_dssp CC-----CHHHHHHHHHHHHHHHHHHH-HHH---TCCSEEEECSSSHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHH-HHH---CCCeEEEEeCCcHHH
Confidence 2 1234444555 444 356666667666553
No 238
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.84 E-value=1.9e-05 Score=74.30 Aligned_cols=94 Identities=15% Similarity=0.306 Sum_probs=64.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh----cCcC-----CCc--cccChHHHhhcCCEEEEeeC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH----WPEP-----MDF--ALNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~----l~~~-----~g~--~~~s~~e~~~~aDvIilaV~ 133 (341)
+||+|||+|.||.+++..|...|+ . +|.++|+++++++. +... ... ..++..+++++||+||++..
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~--~-~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQL--G-DVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAG 82 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--C-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--c-eEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCC
Confidence 699999999999999999999885 2 89999999877542 2221 122 22233578999999999962
Q ss_pred ----h------------HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 134 ----P------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 134 ----~------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
| ..++++.+.+ ..+ .++.+++..++.+.
T Consensus 83 ~p~k~G~~R~dl~~~N~~i~~~i~~~i-~~~---~p~a~vivvtNPvd 126 (321)
T 3p7m_A 83 VPRKPGMSRDDLLGINIKVMQTVGEGI-KHN---CPNAFVICITNPLD 126 (321)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHH-HHH---CTTCEEEECCSSHH
T ss_pred cCCCCCCCHHHHHHHhHHHHHHHHHHH-HHH---CCCcEEEEecCchH
Confidence 2 1234444555 444 36667776666544
No 239
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.83 E-value=9.3e-06 Score=78.06 Aligned_cols=70 Identities=7% Similarity=0.087 Sum_probs=56.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQY 136 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~ 136 (341)
+.||+|||+| +|...+..+.+.. ...++ .+++|++++++++++++|+ .++|.++++++.|++++++|...
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~--~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPP--EGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRSTV 78 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCC--TTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--C
T ss_pred CCEEEEEehH-HHHHHHHHHHhCC--CCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCcc
Confidence 5799999999 8988777765532 11354 4899999999999988999 78899999999999999998754
No 240
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.82 E-value=2.5e-05 Score=73.70 Aligned_cols=96 Identities=17% Similarity=0.191 Sum_probs=65.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh----cCcC--C--Cc-cccChHHHhhcCCEEEEeeC-
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH----WPEP--M--DF-ALNDNHRIIKEAEYVFLAMK- 133 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~----l~~~--~--g~-~~~s~~e~~~~aDvIilaV~- 133 (341)
.+||+|||+|.+|++++..|+..|++ .+|.++|+++++++. |..- + ++ ...+..+.+++||+||++..
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~--~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIA--QEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC--CeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 36999999999999999999998863 489999999887662 2210 1 23 33445677999999999862
Q ss_pred ---hH------------HHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 134 ---PQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 134 ---~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
|. .++++.+.+ ..+ .++.+++..++.+.
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i-~~~---~p~a~ilvvtNPvd 129 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPI-VDS---GFNGIFLVAANPVD 129 (326)
T ss_dssp C----------------CHHHHHHHH-HTT---TCCSEEEECSSSHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHH-Hhc---CCceEEEEccCchH
Confidence 21 123444445 443 35667776766554
No 241
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.80 E-value=2.5e-05 Score=74.79 Aligned_cols=91 Identities=10% Similarity=0.082 Sum_probs=62.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-c------ccChHHHhhcCCEEEEeeChHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-A------LNDNHRIIKEAEYVFLAMKPQY 136 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~------~~s~~e~~~~aDvIilaV~~~~ 136 (341)
.++|+|+|+|.+|..+++.+...|. +|++++|++++++.+.+.+|. . ..+..+.+..+|+||.+++...
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga----~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGA----QVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----EEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 3789999999999999999999984 899999999887766543443 1 1234566788999999997432
Q ss_pred --HHHH-HHHhhhcccccCCCcEEEEec
Q psy316 137 --LDSA-IQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 137 --v~~v-l~~i~~~~l~~~~~~iIVs~~ 161 (341)
...+ .++. .+.+ +++.+||.+.
T Consensus 242 ~~~~~li~~~~-l~~m--k~gg~iV~v~ 266 (369)
T 2eez_A 242 AKAPKLVTRDM-LSLM--KEGAVIVDVA 266 (369)
T ss_dssp ----CCSCHHH-HTTS--CTTCEEEECC
T ss_pred cccchhHHHHH-HHhh--cCCCEEEEEe
Confidence 1111 1222 3344 6677888764
No 242
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.80 E-value=2.1e-05 Score=73.80 Aligned_cols=91 Identities=18% Similarity=0.192 Sum_probs=61.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCe-EEEEcCChhh-hhhcCcCCCc-c-ccChHHHhh-----cCCEEEEeeCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQ-IIASAPSERF-KLHWPEPMDF-A-LNDNHRIIK-----EAEYVFLAMKP 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~-V~v~~r~~e~-~~~l~~~~g~-~-~~s~~e~~~-----~aDvIilaV~~ 134 (341)
++||+|||+|++|..+++.|.+.. +..+ +.++++++++ ...+.+++|+ . ..+.+++++ +.|+||+|+|+
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~--~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNA--KYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSA 81 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHC--SSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhC--cCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCCh
Confidence 468999999999999999986621 1123 4578999887 5566555776 3 344555543 57999999998
Q ss_pred HHHHHHHHHhhhcccccCCCcEEEEe
Q psy316 135 QYLDSAIQGLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 135 ~~v~~vl~~i~~~~l~~~~~~iIVs~ 160 (341)
....+..... ... .+++.|++.
T Consensus 82 ~~h~~~a~~a-l~a---~~Gk~Vi~e 103 (312)
T 1nvm_B 82 SAHVQNEALL-RQA---KPGIRLIDL 103 (312)
T ss_dssp HHHHHHHHHH-HHH---CTTCEEEEC
T ss_pred HHHHHHHHHH-HHh---CCCCEEEEc
Confidence 7666665544 221 126666653
No 243
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.80 E-value=5.5e-05 Score=69.59 Aligned_cols=99 Identities=11% Similarity=0.058 Sum_probs=64.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEE-EEcCChhhh--hhcCc-----CCCc-cccChHHHhhcCCEEEEeeCh
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQII-ASAPSERFK--LHWPE-----PMDF-ALNDNHRIIKEAEYVFLAMKP 134 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~-v~~r~~e~~--~~l~~-----~~g~-~~~s~~e~~~~aDvIilaV~~ 134 (341)
|||+|+|+ |+||+.+++.+.+.. ..++. ++++++++. ..+.+ ..++ ...+.++++..+|+||-++.|
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~---~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~p 82 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALE---GVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRP 82 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHST---TEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCC---CCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCCh
Confidence 79999999 999999999887542 24655 788876431 11111 1244 456677777889999977788
Q ss_pred HHHHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHh
Q psy316 135 QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKK 172 (341)
Q Consensus 135 ~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~ 172 (341)
....+.+... . ..+.-+|.-..|.+.++.++.
T Consensus 83 ~~~~~~~~~a-~-----~~G~~vVigTtG~~~e~~~~L 114 (273)
T 1dih_A 83 EGTLNHLAFC-R-----QHGKGMVIGTTGFDEAGKQAI 114 (273)
T ss_dssp HHHHHHHHHH-H-----HTTCEEEECCCCCCHHHHHHH
T ss_pred HHHHHHHHHH-H-----hCCCCEEEECCCCCHHHHHHH
Confidence 7777766554 2 234334443457887655443
No 244
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=97.79 E-value=2.7e-05 Score=73.08 Aligned_cols=94 Identities=20% Similarity=0.232 Sum_probs=62.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCC--hhhhhhcCcC---------CC--ccccChHHHhhcCCEEEEe
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPS--ERFKLHWPEP---------MD--FALNDNHRIIKEAEYVFLA 131 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~--~e~~~~l~~~---------~g--~~~~s~~e~~~~aDvIila 131 (341)
+||+|||+|.||.+++..|...|+ .+|.++|++ +++++....+ .. +...+..+.+++||+||++
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~---~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIia 85 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKEL---ADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVIT 85 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---CEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC---CeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEe
Confidence 589999999999999999999884 389999998 4444321110 11 2222335778999999999
Q ss_pred e----ChH------------HHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 132 M----KPQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 132 V----~~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
. +|. .++++.+.+ ..+ .++.+++..++.+.
T Consensus 86 ag~p~kpg~~R~dl~~~N~~i~~~i~~~i-~~~---~p~a~vlvvsNPvd 131 (315)
T 3tl2_A 86 AGIARKPGMSRDDLVATNSKIMKSITRDI-AKH---SPNAIIVVLTNPVD 131 (315)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHH-HHH---CTTCEEEECCSSHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHh---CCCeEEEECCChHH
Confidence 7 221 234444555 444 46777777767654
No 245
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.78 E-value=1.1e-05 Score=73.99 Aligned_cols=89 Identities=16% Similarity=0.191 Sum_probs=62.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHH-HHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLD-SAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~-~vl 141 (341)
.+++.|||+|.+|.+++..|.+.|. +|++++|++++++.+. ++++ .. +.++ +.++|+||-|+|..... ..+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~----~v~V~nRt~~ka~~la-~~~~~~~-~~~~-l~~~DiVInaTp~Gm~~~~~l 190 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL----QVSVLNRSSRGLDFFQ-RLGCDCF-MEPP-KSAFDLIINATSASLHNELPL 190 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCTTHHHHH-HHTCEEE-SSCC-SSCCSEEEECCTTCCCCSCSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHH-HCCCeEe-cHHH-hccCCEEEEcccCCCCCCCCC
Confidence 5789999999999999999999983 9999999999998887 5665 22 2222 23899999999843100 001
Q ss_pred --HHhhhcccccCCCcEEEEecC
Q psy316 142 --QGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 142 --~~i~~~~l~~~~~~iIVs~~a 162 (341)
..+ ...+ +++.+++++.-
T Consensus 191 ~~~~l-~~~l--~~~~~v~D~vY 210 (269)
T 3phh_A 191 NKEVL-KGYF--KEGKLAYDLAY 210 (269)
T ss_dssp CHHHH-HHHH--HHCSEEEESCC
T ss_pred ChHHH-HhhC--CCCCEEEEeCC
Confidence 011 1124 45678888753
No 246
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.78 E-value=2.2e-05 Score=74.14 Aligned_cols=96 Identities=10% Similarity=0.001 Sum_probs=66.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC------C----Cc-cccChHHHhhcCCEEEEee
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP------M----DF-ALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~------~----g~-~~~s~~e~~~~aDvIilaV 132 (341)
.+||+|||+|.||..++..|+..|++ ++|.++|+++++++....+ + .+ ...+.++ +++||+||++.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~--~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIita 97 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLA--DEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITA 97 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCC--SEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC--CeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeC
Confidence 47999999999999999999998853 4899999998766532110 1 12 2345544 89999999985
Q ss_pred C----h------------HHHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 133 K----P------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 133 ~----~------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
. | ..++++.+++ ..+ .++.+++..++.+.+
T Consensus 98 G~p~kpG~tR~dll~~N~~I~k~i~~~I-~k~---~P~a~ilvvtNPvdi 143 (330)
T 3ldh_A 98 GARQQEGESRLNLVQRNVNIFKFIIPNI-VKH---SPDCLKELHPELGTD 143 (330)
T ss_dssp SCCCCSSCCTTGGGHHHHHHHHHHHHHH-HHH---CTTCEEEECSSSHHH
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHH-Hhh---CCCceEEeCCCccHH
Confidence 2 1 2245566666 554 467777777776553
No 247
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.78 E-value=2.5e-05 Score=76.57 Aligned_cols=76 Identities=13% Similarity=0.214 Sum_probs=60.8
Q ss_pred CeEEEEcc----cHHHHHHHHHHHhc-CCCCCCeE-EEEcCChhhhhhcCcCCCc----cccChHHHhh--cCCEEEEee
Q psy316 65 TKVGFIGA----GNMAQAVATSLIRT-GLCIPAQI-IASAPSERFKLHWPEPMDF----ALNDNHRIIK--EAEYVFLAM 132 (341)
Q Consensus 65 ~kIgiIG~----G~mG~aia~~L~~~-G~~~~~~V-~v~~r~~e~~~~l~~~~g~----~~~s~~e~~~--~aDvIilaV 132 (341)
+||||||+ |.||..++..|.+. . ..+| .++++++++++.+++++|+ .+.+.++++. +.|+|++|+
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~---~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~t 97 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSS---QFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAI 97 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTT---TEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECS
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCC---CeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeC
Confidence 68999999 99999999999886 2 1354 6899999998888776664 4678888886 689999999
Q ss_pred ChHHHHHHHHH
Q psy316 133 KPQYLDSAIQG 143 (341)
Q Consensus 133 ~~~~v~~vl~~ 143 (341)
|+....+++..
T Consensus 98 p~~~H~~~~~~ 108 (438)
T 3btv_A 98 QVASHYEVVMP 108 (438)
T ss_dssp CHHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 98765555543
No 248
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.76 E-value=3.6e-05 Score=72.54 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=54.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCCh-hhhhhcC---cCCCc---cccChHHHhh--cCCEEEEee
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSE-RFKLHWP---EPMDF---ALNDNHRIIK--EAEYVFLAM 132 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~-e~~~~l~---~~~g~---~~~s~~e~~~--~aDvIilaV 132 (341)
|++||||||+|.+|...++.| ..+ .+| .++++++ ++++.++ +++|+ .+.|.+++++ +.|+|++|+
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l-~~~----~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~t 75 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL-DEE----CSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINT 75 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC-CTT----EEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECS
T ss_pred CceEEEEEccchhHHHHHHhc-CCC----cEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeC
Confidence 678999999999998777776 333 355 4799887 3444332 23453 6788899887 489999999
Q ss_pred ChHHHHHHHHHh
Q psy316 133 KPQYLDSAIQGL 144 (341)
Q Consensus 133 ~~~~v~~vl~~i 144 (341)
|+....+++...
T Consensus 76 p~~~H~~~~~~a 87 (337)
T 3ip3_A 76 VFSLNGKILLEA 87 (337)
T ss_dssp SHHHHHHHHHHH
T ss_pred CcchHHHHHHHH
Confidence 987666655443
No 249
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.76 E-value=4.1e-05 Score=74.26 Aligned_cols=86 Identities=17% Similarity=0.153 Sum_probs=63.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-ccc--------------------------
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALN-------------------------- 116 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~-------------------------- 116 (341)
..+|+|||+|.+|..+++.+...|. +|+++||++++++.+.+ +|. ...
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga----~V~v~D~~~~~~~~~~~-lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 246 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGA----IVRAFDTRPEVKEQVQS-MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEM 246 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCGGGHHHHHH-TTCEECCC--------CCHHHHHHSHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHH-cCCEEEEecccccccccccchhhccHHHHHHHH
Confidence 4689999999999999999998884 89999999988777644 565 221
Q ss_pred -ChHHHhhcCCEEEEe--eCh----HHH-HHHHHHhhhcccccCCCcEEEEec
Q psy316 117 -DNHRIIKEAEYVFLA--MKP----QYL-DSAIQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 117 -s~~e~~~~aDvIila--V~~----~~v-~~vl~~i~~~~l~~~~~~iIVs~~ 161 (341)
+..+.+..+|+||.+ +|. ..+ ++.++. + +++.+||++.
T Consensus 247 ~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~-----m--k~g~vIVdva 292 (401)
T 1x13_A 247 ELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDS-----M--KAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHT-----S--CTTCEEEETT
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhc-----C--CCCcEEEEEc
Confidence 245667789999999 441 212 344443 4 6788888875
No 250
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.76 E-value=0.00013 Score=68.15 Aligned_cols=76 Identities=12% Similarity=0.135 Sum_probs=57.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC-c-cccChHHHh----------hcCCEEEEe
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD-F-ALNDNHRII----------KEAEYVFLA 131 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g-~-~~~s~~e~~----------~~aDvIila 131 (341)
+||||||+ |.+|...+..|.+.+. .-+.++++++++. .+.+.++ . ...+.++++ .+.|+|++|
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~---~lvav~d~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~ 79 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGG---VLVASLDPATNVG-LVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIA 79 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTC---EEEEEECSSCCCG-GGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEEC
T ss_pred eEEEEECCChHHHHHHHHHHHhCCC---EEEEEEcCCHHHH-HHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEEC
Confidence 69999999 7899999999988763 3456899998774 3444443 4 667777776 478999999
Q ss_pred eChHHHHHHHHHh
Q psy316 132 MKPQYLDSAIQGL 144 (341)
Q Consensus 132 V~~~~v~~vl~~i 144 (341)
+|+....++....
T Consensus 80 tP~~~H~~~~~~a 92 (312)
T 3o9z_A 80 SPNHLHYPQIRMA 92 (312)
T ss_dssp SCGGGHHHHHHHH
T ss_pred CCchhhHHHHHHH
Confidence 9998766665543
No 251
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.75 E-value=0.00014 Score=68.16 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=57.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC-c-cccChHHHh-----------hcCCEEE
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD-F-ALNDNHRII-----------KEAEYVF 129 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g-~-~~~s~~e~~-----------~~aDvIi 129 (341)
++||||||+ |.||...+..|.+.+. .-+.++++++++. .+.++++ . ...+.++++ .+.|+|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~---~lvav~d~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~ 78 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGN---CLVSAYDINDSVG-IIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVS 78 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTC---EEEEEECSSCCCG-GGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEE
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCC---EEEEEEcCCHHHH-HHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEE
Confidence 379999999 7899999999988763 3456899998764 3444453 4 667877776 4689999
Q ss_pred EeeChHHHHHHHHHh
Q psy316 130 LAMKPQYLDSAIQGL 144 (341)
Q Consensus 130 laV~~~~v~~vl~~i 144 (341)
+|+|+....++....
T Consensus 79 I~tP~~~H~~~~~~a 93 (318)
T 3oa2_A 79 ICSPNYLHYPHIAAG 93 (318)
T ss_dssp ECSCGGGHHHHHHHH
T ss_pred ECCCcHHHHHHHHHH
Confidence 999997666665443
No 252
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.74 E-value=2.4e-05 Score=74.93 Aligned_cols=67 Identities=15% Similarity=0.101 Sum_probs=54.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhh-cCCEEEEeeChH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIK-EAEYVFLAMKPQ 135 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~-~aDvIilaV~~~ 135 (341)
.++|+|+|+|+||..+++.|.+.|. +|+++|+++++++.+.++++. .. +..+++. +||+++.|....
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~Ga----kVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a~~~ 241 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGA----KLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCALGA 241 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECSCSC
T ss_pred cCEEEEECchHHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccchHH
Confidence 4789999999999999999999995 899999999988877765666 33 4445555 899999886443
No 253
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.73 E-value=0.0001 Score=70.00 Aligned_cols=74 Identities=16% Similarity=0.083 Sum_probs=54.5
Q ss_pred CeEEEEcccHHHHH-HHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCC-Cc-cccChHHHhh--cCCEEEEeeChHHHH
Q psy316 65 TKVGFIGAGNMAQA-VATSLIRTGLCIPAQI-IASAPSERFKLHWPEPM-DF-ALNDNHRIIK--EAEYVFLAMKPQYLD 138 (341)
Q Consensus 65 ~kIgiIG~G~mG~a-ia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~-g~-~~~s~~e~~~--~aDvIilaV~~~~v~ 138 (341)
+||||||+|.||.. .+..|.+. +..+| .+++|+++++. +++ ++ .+.+.++++. +.|+|++|+|+....
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~---~~~~l~av~d~~~~~~~---~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 79 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVL---DEYQISKIMTSRTEEVK---RDFPDAEVVHELEEITNDPAIELVIVTTPSGLHY 79 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC---TTEEEEEEECSCHHHHH---HHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHH
T ss_pred ceEEEEccCHHHHHHHHHHHhhC---CCeEEEEEEcCCHHHHH---hhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHH
Confidence 68999999999997 66666554 22355 58999987743 224 45 6788899887 689999999987666
Q ss_pred HHHHHh
Q psy316 139 SAIQGL 144 (341)
Q Consensus 139 ~vl~~i 144 (341)
+++...
T Consensus 80 ~~~~~a 85 (358)
T 3gdo_A 80 EHTMAC 85 (358)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
No 254
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.73 E-value=4.1e-05 Score=71.73 Aligned_cols=95 Identities=17% Similarity=0.216 Sum_probs=65.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhc----CcC----CCc-cccChHHHhhcCCEEEEeeCh-
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHW----PEP----MDF-ALNDNHRIIKEAEYVFLAMKP- 134 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l----~~~----~g~-~~~s~~e~~~~aDvIilaV~~- 134 (341)
|||+|||+|.+|.+++..|+..+. ..+|.++|+++++++.. ... ..+ ...+..+++++||+||++...
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~--~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~ 78 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGV--AREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVA 78 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--CSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--CCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCC
Confidence 689999999999999999998875 35899999998776632 111 022 222346779999999998731
Q ss_pred ---------------HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 135 ---------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 135 ---------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
..++++.+.+ ..+ .++.+|+..++.+.
T Consensus 79 ~~~g~~r~dl~~~n~~i~~~i~~~i-~~~---~p~a~iiv~tNPv~ 120 (310)
T 2xxj_A 79 QRPGETRLQLLDRNAQVFAQVVPRV-LEA---APEAVLLVATNPVD 120 (310)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHH-HHH---CTTCEEEECSSSHH
T ss_pred CCCCcCHHHHHHhhHHHHHHHHHHH-HHH---CCCcEEEEecCchH
Confidence 1244455555 444 35666666766655
No 255
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.73 E-value=5.1e-05 Score=67.53 Aligned_cols=89 Identities=11% Similarity=0.006 Sum_probs=59.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cc---cChH---HH-hhcCCEEEEee
Q psy316 62 PMWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--AL---NDNH---RI-IKEAEYVFLAM 132 (341)
Q Consensus 62 ~m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~---~s~~---e~-~~~aDvIilaV 132 (341)
.+.++|.|+|+|.+|..+++.|.+.| + |+++++++++++.+. .++ .. .+.+ ++ +.++|.||+++
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~~~g----~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELRGSE----V-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDL 79 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHSTTSE----E-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred CCCCEEEEECCChHHHHHHHHHHhCC----e-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence 35678999999999999999998877 6 999999998887665 243 21 2222 22 56899999999
Q ss_pred ChHHHHHHHHHhhhcccccCCC-cEEEEe
Q psy316 133 KPQYLDSAIQGLVNDKVTLNSS-RCIISM 160 (341)
Q Consensus 133 ~~~~v~~vl~~i~~~~l~~~~~-~iIVs~ 160 (341)
+++...-.+... ...+ +++ ++|+-+
T Consensus 80 ~~d~~n~~~~~~-a~~~--~~~~~iia~~ 105 (234)
T 2aef_A 80 ESDSETIHCILG-IRKI--DESVRIIAEA 105 (234)
T ss_dssp SCHHHHHHHHHH-HHHH--CSSSEEEEEC
T ss_pred CCcHHHHHHHHH-HHHH--CCCCeEEEEE
Confidence 876544333333 2334 455 555544
No 256
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.72 E-value=7.6e-05 Score=72.66 Aligned_cols=70 Identities=14% Similarity=0.193 Sum_probs=54.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cccCh--HHH-----hhcCCEEEEeeCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALNDN--HRI-----IKEAEYVFLAMKP 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~s~--~e~-----~~~aDvIilaV~~ 134 (341)
.++|.|||+|++|..+++.|.+.|+ +|+++++++++++.+++ .|+ ...|. .+. +.++|+||++++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~----~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV----KMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAIDD 78 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC----CEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC----CEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECCCC
Confidence 3579999999999999999999985 99999999999988876 465 22221 222 4689999999986
Q ss_pred HHHH
Q psy316 135 QYLD 138 (341)
Q Consensus 135 ~~v~ 138 (341)
....
T Consensus 79 ~~~n 82 (413)
T 3l9w_A 79 PQTN 82 (413)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 5433
No 257
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.72 E-value=8.9e-05 Score=70.38 Aligned_cols=70 Identities=14% Similarity=0.127 Sum_probs=53.2
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh----cCcC-C---Cc-cccChHHHhhcCCEEEE
Q psy316 61 VPMWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH----WPEP-M---DF-ALNDNHRIIKEAEYVFL 130 (341)
Q Consensus 61 ~~m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~----l~~~-~---g~-~~~s~~e~~~~aDvIil 130 (341)
+...+||+|||+ |.+|+.++..++..|. ..+|.++|+++++++. |..- + .+ ...+..+++++||+||+
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~--~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvi 82 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRL--TPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVS 82 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTC--CSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCC--CCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEE
Confidence 444679999998 9999999999998885 2489999999876553 2210 1 23 34567788999999999
Q ss_pred ee
Q psy316 131 AM 132 (341)
Q Consensus 131 aV 132 (341)
+.
T Consensus 83 ta 84 (343)
T 3fi9_A 83 SG 84 (343)
T ss_dssp CC
T ss_pred cc
Confidence 86
No 258
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.72 E-value=4e-05 Score=71.25 Aligned_cols=96 Identities=17% Similarity=0.280 Sum_probs=64.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh----cCc---CCC----ccccChHHHhhcCCEEEEee-
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH----WPE---PMD----FALNDNHRIIKEAEYVFLAM- 132 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~----l~~---~~g----~~~~s~~e~~~~aDvIilaV- 132 (341)
|||+|||+|++|++++..|+.++.+ .++.++|.++++++- |.. -++ +...+..+.+++||+||++-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~--~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG 78 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV--DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAG 78 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC--SEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC--CEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecC
Confidence 7999999999999999999988863 589999998865442 211 011 12223346789999999985
Q ss_pred ---ChH------------HHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 133 ---KPQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 133 ---~~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
+|. .++++.+++ ..+ .++.+++-+++.++.
T Consensus 79 ~prkpGmtR~dLl~~Na~I~~~i~~~i-~~~---~p~aivlvvsNPvd~ 123 (294)
T 2x0j_A 79 LARKPGMTRLDLAHKNAGIIKDIAKKI-VEN---APESKILVVTNPMDV 123 (294)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHHHHHH-HTT---STTCEEEECSSSHHH
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHH-Hhc---CCceEEEEecCcchh
Confidence 231 123444455 444 367777777777653
No 259
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.71 E-value=0.0002 Score=66.27 Aligned_cols=92 Identities=13% Similarity=0.117 Sum_probs=67.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCe-EEEEcCChhhhhhcCcCCCc-cccChHHHhh--cCCEEEEeeChHHHH
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQ-IIASAPSERFKLHWPEPMDF-ALNDNHRIIK--EAEYVFLAMKPQYLD 138 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~-V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~--~aDvIilaV~~~~v~ 138 (341)
.+||+|+|+ |+||..+++.+.+.|+ + |+..++. +.. .+.+|+ ...+..++.. .+|++++++||....
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~----~~v~~VnP~--~~g--~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~ 78 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGT----KIVAGVTPG--KGG--MEVLGVPVYDTVKEAVAHHEVDASIIFVPAPAAA 78 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTC----EEEEEECTT--CTT--CEETTEEEESSHHHHHHHSCCSEEEECCCHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCC----eEEEEECCC--CCC--ceECCEEeeCCHHHHhhcCCCCEEEEecCHHHHH
Confidence 478999998 9999999999999885 5 3345543 211 112577 7788888888 899999999999999
Q ss_pred HHHHHhhhcccccCCCcEEEEecCCCCHHH
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLVGVDLET 168 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~agi~~~~ 168 (341)
+++++. ... .- +.+|-++.|++.+.
T Consensus 79 ~~~~ea-~~~---Gi-~~vVi~t~G~~~~~ 103 (288)
T 1oi7_A 79 DAALEA-AHA---GI-PLIVLITEGIPTLD 103 (288)
T ss_dssp HHHHHH-HHT---TC-SEEEECCSCCCHHH
T ss_pred HHHHHH-HHC---CC-CEEEEECCCCCHHH
Confidence 999876 331 11 33444667888653
No 260
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.71 E-value=2.2e-05 Score=72.16 Aligned_cols=67 Identities=18% Similarity=0.189 Sum_probs=53.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQ 135 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~ 135 (341)
.+++.|||+|.+|.+++..|.+.|. .+|++++|++++++.+.++++. ...+.. +.++|+||-|+|..
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~---~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~g 186 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGF---EKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIG 186 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTC---CCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC---CEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCC
Confidence 4689999999999999999999984 5899999999999888765554 221221 46799999999864
No 261
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.69 E-value=0.00033 Score=65.39 Aligned_cols=93 Identities=11% Similarity=0.140 Sum_probs=67.7
Q ss_pred CCeEEEE-cc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhh--cCCEEEEeeChHHHH
Q psy316 64 WTKVGFI-GA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIK--EAEYVFLAMKPQYLD 138 (341)
Q Consensus 64 ~~kIgiI-G~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~--~aDvIilaV~~~~v~ 138 (341)
+++++|| |+ |++|..++++|.+.|+ + .++..||.+.. .+-.|+ ...+..++.+ ..|++++++|+....
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~G~----~-~v~~VnP~~~g--~~i~G~~vy~sl~el~~~~~vD~avI~vP~~~~~ 85 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEYGT----N-LVGGTTPGKGG--KTHLGLPVFNTVKEAKEQTGATASVIYVPPPFAA 85 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC----E-EEEEECTTCTT--CEETTEEEESSHHHHHHHHCCCEEEECCCHHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHCCC----c-EEEEeCCCcCc--ceECCeeeechHHHhhhcCCCCEEEEecCHHHHH
Confidence 4678999 99 9999999999999995 5 33444444321 112477 7778888887 899999999999999
Q ss_pred HHHHHhhhcccccCCCcEEEEecCCCCHHH
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLVGVDLET 168 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~agi~~~~ 168 (341)
+++++. ... .- +.+|.++.|++.+.
T Consensus 86 ~~~~e~-i~~---Gi-~~iv~~t~G~~~~~ 110 (305)
T 2fp4_A 86 AAINEA-IDA---EV-PLVVCITEGIPQQD 110 (305)
T ss_dssp HHHHHH-HHT---TC-SEEEECCCCCCHHH
T ss_pred HHHHHH-HHC---CC-CEEEEECCCCChHH
Confidence 999886 321 12 35555778988653
No 262
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.67 E-value=2.5e-05 Score=71.89 Aligned_cols=92 Identities=12% Similarity=0.186 Sum_probs=63.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC---ccccChHHHh-hcCCEEEEeeChHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD---FALNDNHRII-KEAEYVFLAMKPQYLDS 139 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g---~~~~s~~e~~-~~aDvIilaV~~~~v~~ 139 (341)
.+++.|+|+|.+|.+++..|.+.|. .+|++++|++++++.++++++ +...+..++. .++|+||-|+|.....+
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~---~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~~ 196 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGP---SELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTAD 196 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCC---SEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGTC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCC---CEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCCC
Confidence 4689999999999999999999984 589999999999888765433 2111222322 68999999998643211
Q ss_pred HHHHhhhcccccCCCcEEEEec
Q psy316 140 AIQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~ 161 (341)
. ..+....+ +++.+|+++.
T Consensus 197 ~-~~i~~~~l--~~~~~V~Dlv 215 (272)
T 3pwz_A 197 L-PPLPADVL--GEAALAYELA 215 (272)
T ss_dssp C-CCCCGGGG--TTCSEEEESS
T ss_pred C-CCCCHHHh--CcCCEEEEee
Confidence 0 01102245 6777888875
No 263
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.66 E-value=0.00018 Score=67.65 Aligned_cols=70 Identities=14% Similarity=0.252 Sum_probs=54.3
Q ss_pred CeEEEEcccHHHH-HHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc-cccChHHHhhc---CCEEEEeeChHHHH
Q psy316 65 TKVGFIGAGNMAQ-AVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF-ALNDNHRIIKE---AEYVFLAMKPQYLD 138 (341)
Q Consensus 65 ~kIgiIG~G~mG~-aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~---aDvIilaV~~~~v~ 138 (341)
+||||||+|.||. ..+..|.+.. ..+| .+++|++++ +|+ ...+.++++.+ .|+|++|+|+....
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~~---~~~lvav~d~~~~~-------~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~ 95 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKNA---NFKLVATASRHGTV-------EGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRY 95 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHCT---TEEEEEEECSSCCC-------TTSEEESSHHHHHHHCTTCCEEEECSCHHHHH
T ss_pred ceEEEEecCHHHHHHHHHHHHhCC---CeEEEEEEeCChhh-------cCCCccCCHHHHHhCCCCCCEEEEeCCcHHHH
Confidence 6999999999998 7888888753 2354 578988542 577 77888898765 89999999988766
Q ss_pred HHHHHh
Q psy316 139 SAIQGL 144 (341)
Q Consensus 139 ~vl~~i 144 (341)
+++...
T Consensus 96 ~~~~~a 101 (330)
T 4ew6_A 96 EAAYKA 101 (330)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666544
No 264
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.65 E-value=0.00013 Score=68.82 Aligned_cols=95 Identities=14% Similarity=0.179 Sum_probs=65.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh----cCcC--C----Cc-cccChHHHhhcCCEEEEee
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH----WPEP--M----DF-ALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~----l~~~--~----g~-~~~s~~e~~~~aDvIilaV 132 (341)
.+||+|||+|.||.+++..|+..|+ ..+|.++|+++++++. |..- + .+ ...+. +.+++||+||++.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~--~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~aDiVvi~a 95 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDL--ADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANSKLVIITA 95 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTC--CSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTEEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--CceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCCCEEEEcc
Confidence 4689999999999999999999885 3589999999876653 2210 1 12 23344 4689999999986
Q ss_pred --C--h------------HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 133 --K--P------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 133 --~--~------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
| | ..++++.+.+ ..+ .++.+++..++.+.
T Consensus 96 G~~~kpG~tR~dL~~~N~~I~~~i~~~i-~~~---~p~a~vlvvtNPvd 140 (331)
T 4aj2_A 96 GARQQEGESRLNLVQRNVNIFKFIIPNV-VKY---SPQCKLLIVSNPVD 140 (331)
T ss_dssp SCCCCTTCCGGGGHHHHHHHHHHHHHHH-HHH---CTTCEEEECSSSHH
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHH-HHH---CCCeEEEEecChHH
Confidence 2 2 1234444555 544 46777777777655
No 265
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.63 E-value=2.1e-05 Score=72.75 Aligned_cols=92 Identities=13% Similarity=0.100 Sum_probs=62.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC----ccccChHHHhhcCCEEEEeeChHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD----FALNDNHRIIKEAEYVFLAMKPQYLDS 139 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g----~~~~s~~e~~~~aDvIilaV~~~~v~~ 139 (341)
.+++.|+|+|.+|.+++..|.+.|. .+|++++|++++++.+.++++ +...+..++..++|+||-|+|.....+
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~---~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~ 202 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQP---ASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGE 202 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCC---SEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC---
T ss_pred CCEEEEECchHHHHHHHHHHHhcCC---CeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCC
Confidence 4689999999999999999999984 589999999999887765432 212233344467899999998643221
Q ss_pred HHHHhhhcccccCCCcEEEEec
Q psy316 140 AIQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~ 161 (341)
. ..+....+ +++.+|+++.
T Consensus 203 ~-~~l~~~~l--~~~~~V~Dlv 221 (281)
T 3o8q_A 203 L-PAIDPVIF--SSRSVCYDMM 221 (281)
T ss_dssp --CSCCGGGE--EEEEEEEESC
T ss_pred C-CCCCHHHh--CcCCEEEEec
Confidence 1 01101235 5667777764
No 266
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.63 E-value=4e-05 Score=70.84 Aligned_cols=66 Identities=11% Similarity=0.074 Sum_probs=53.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKP 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~ 134 (341)
.+++.|+|+|.+|.+++..|.+.|. .+|++++|++++++.++++++. ...+..+ + ++|+||-|+|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~---~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~ 188 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFA---KDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPK 188 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTC---SEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCC---CEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCcc
Confidence 5789999999999999999999984 5899999999999998876543 2333333 4 79999999975
No 267
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.62 E-value=0.00091 Score=61.09 Aligned_cols=164 Identities=14% Similarity=0.153 Sum_probs=110.7
Q ss_pred Cc-cccChHHHhhcCCEEEEeeChHH-HHHHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhccccCCCCCCCCeEEEE
Q psy316 112 DF-ALNDNHRIIKEAEYVFLAMKPQY-LDSAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLSVLVPNPNDAPTIIRV 189 (341)
Q Consensus 112 g~-~~~s~~e~~~~aDvIilaV~~~~-v~~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~~~~~~~~~~~~vvr~ 189 (341)
|+ +++|..|+++++|++|+-+|-.. -.++++.+ .+++ +.|.+|.+. ..++.-.+...|.. . .+++.. |..+
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakki-i~~l--pEgAII~nT-CTipp~~ly~~le~-l-~R~Dvg-IsS~ 200 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKF-ADAI--PEGAIVTHA-CTIPTTKFAKIFKD-L-GREDLN-ITSY 200 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHH-GGGS--CTTCEEEEC-SSSCHHHHHHHHHH-T-TCTTSE-EEEC
T ss_pred CcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHH-HhhC--cCCCEEecc-cCCCHHHHHHHHHH-h-CcccCC-eecc
Confidence 66 67788899999999999999643 56788888 8888 788777765 45776555444432 0 013445 6666
Q ss_pred cCC-chhhhcCceEEEEeCCCCCccHHHHHHHHHHHHhcCCe-EEcCCCchhHHHHHhcchHHHHHHHHHHHHHH---H-
Q psy316 190 MPN-TAMKYGKGITGMCHDVHLDKESEHLNMAIKIMEQGGIV-EIIPESMMNSFGAIAGSGCAYLFLVMDAMADG---A- 263 (341)
Q Consensus 190 mpn-~p~~v~~g~~~l~~~~~~~~~~~~~~~v~~ll~~lG~~-~~v~e~~~d~~~al~g~gpa~~~~~~eal~ea---~- 263 (341)
+|. .|.. +|.+...-+ -.++ ++.+++.+|.++.|.. +.++.+....+.-+ +.+..+....++.+. +
T Consensus 201 HPaaVPgt--~Gq~~~g~~-yAtE--EqIeklveLaksa~k~ay~vPAdl~SpV~DM---gs~vTAv~~AGiL~Y~~~vt 272 (358)
T 2b0j_A 201 HPGCVPEM--KGQVYIAEG-YASE--EAVNKLYEIGKIARGKAFKMPANLIGPVCDM---CSAVTATVYAGLLAYRDAVT 272 (358)
T ss_dssp BCSSCTTT--CCCEEEEES-SSCH--HHHHHHHHHHHHHHSCEEEEEHHHHHHHHST---THHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCC--CCccccccc-cCCH--HHHHHHHHHHHHhCCCeEecchhhccchhhh---HHHHHHHHHHHHHHHHHHHH
Confidence 664 3333 344443333 3566 9999999999999876 45677655544433 334444444455553 2
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHh
Q psy316 264 VKQGIPRDMALRIGAQLLKGSGQLVHK 290 (341)
Q Consensus 264 ~~~Gl~~~~a~~lv~~~~~gs~~l~~~ 290 (341)
.-.|-|.+-+...+..++.-.+.+++.
T Consensus 273 kIlgAP~~mie~q~~esL~tiasLve~ 299 (358)
T 2b0j_A 273 KILGAPADFAQMMADEALTQIHNLMKE 299 (358)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 247999999999999999888888876
No 268
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.60 E-value=0.00041 Score=64.34 Aligned_cols=93 Identities=12% Similarity=0.135 Sum_probs=66.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhh--cCCEEEEeeChHHHHH
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIK--EAEYVFLAMKPQYLDS 139 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~--~aDvIilaV~~~~v~~ 139 (341)
..++.|+|+ |+||+.+++.|.+.|+ + .++..+|.+... +-+|+ .+.+..++.. .+|++++++||..+.+
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g~----~-~V~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~~ 85 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECGT----K-IVGGVTPGKGGQ--NVHGVPVFDTVKEAVKETDANASVIFVPAPFAKD 85 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTTC----C-EEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCC----e-EEEEeCCCCCCc--eECCEeeeCCHHHHhhcCCCCEEEEccCHHHHHH
Confidence 457888899 9999999999999885 4 344444543211 11577 7788888887 8999999999999999
Q ss_pred HHHHhhhcccccCCCcEEEEecCCCCHHH
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLVGVDLET 168 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~agi~~~~ 168 (341)
++++. ... .-+.+|-++.|++.+.
T Consensus 86 ~v~ea-~~~----Gi~~vVi~t~G~~~~~ 109 (294)
T 2yv1_A 86 AVFEA-IDA----GIELIVVITEHIPVHD 109 (294)
T ss_dssp HHHHH-HHT----TCSEEEECCSCCCHHH
T ss_pred HHHHH-HHC----CCCEEEEECCCCCHHH
Confidence 88876 331 1234555677888653
No 269
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.59 E-value=0.0001 Score=71.00 Aligned_cols=86 Identities=12% Similarity=0.149 Sum_probs=62.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cc--cC-----------------------
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-AL--ND----------------------- 117 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~--~s----------------------- 117 (341)
..+|+|||+|.+|...++.+...|. +|+++||++++++.+.+ +|. .. ..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga----~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~ 246 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGA----VVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKK 246 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCSTTHHHHHH-TTCEECCC-----------------------CC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhh
Confidence 4689999999999999999998884 79999999888776655 665 22 11
Q ss_pred ----hHHHhhcCCEEEEee--Ch----HHH-HHHHHHhhhcccccCCCcEEEEec
Q psy316 118 ----NHRIIKEAEYVFLAM--KP----QYL-DSAIQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 118 ----~~e~~~~aDvIilaV--~~----~~v-~~vl~~i~~~~l~~~~~~iIVs~~ 161 (341)
..+.+..+|+||.++ |. ..+ .+.++. + +++.+||++.
T Consensus 247 ~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~-----m--k~g~vivdva 294 (384)
T 1l7d_A 247 QAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTK-----M--KPGSVIIDLA 294 (384)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTT-----S--CTTCEEEETT
T ss_pred hHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhc-----C--CCCCEEEEEe
Confidence 455677899999988 42 112 333333 4 6778888775
No 270
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.58 E-value=2.8e-05 Score=71.37 Aligned_cols=69 Identities=16% Similarity=0.134 Sum_probs=51.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC----ccccChHHHhh-cCCEEEEeeChHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD----FALNDNHRIIK-EAEYVFLAMKPQY 136 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g----~~~~s~~e~~~-~aDvIilaV~~~~ 136 (341)
.+++.|+|+|.||.+++..|.+.|. +|++++|++++++.+.++++ +...+.+++.. .+|+||-++|...
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~----~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQ----NIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTC----EEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 4689999999999999999999983 99999999998887765332 21122233223 7899999988653
No 271
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.54 E-value=8.5e-05 Score=68.01 Aligned_cols=68 Identities=12% Similarity=0.117 Sum_probs=51.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC----ccccChHHHh-hcCCEEEEeeChH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD----FALNDNHRII-KEAEYVFLAMKPQ 135 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g----~~~~s~~e~~-~~aDvIilaV~~~ 135 (341)
.+++.|+|+|.||.+++..|.+.|. +|++++|++++++.+.++++ +...+..++. ..+|+||.+++..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~----~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~ 191 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDC----AVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSG 191 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCC----EEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCC
Confidence 4689999999999999999999984 99999999998877765443 1112222322 4788888888754
No 272
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.54 E-value=0.00021 Score=66.94 Aligned_cols=96 Identities=14% Similarity=0.151 Sum_probs=65.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhh--hhcCcC-CC--c-c---ccChHHHhhcCCEEEEeeC-
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFK--LHWPEP-MD--F-A---LNDNHRIIKEAEYVFLAMK- 133 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~--~~l~~~-~g--~-~---~~s~~e~~~~aDvIilaV~- 133 (341)
|||+|||+ |.+|..++..|+..|+ .++|.++|+++... ..+... .. + . +++.+++++++|+||++..
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~--~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~ 78 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL--VSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV 78 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT--CSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC--CcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence 58999998 9999999999998874 46899999986221 123221 11 2 2 1356778999999999972
Q ss_pred ---h------------HHHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 134 ---P------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 134 ---~------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
+ ..++++++.+ ..+. ++..||..++.+..
T Consensus 79 ~~~~g~~r~dl~~~n~~i~~~i~~~i-~~~~---p~a~viv~sNPv~~ 122 (314)
T 1mld_A 79 PRKPGMTRDDLFNTNATIVATLTAAC-AQHC---PDAMICIISNPVNS 122 (314)
T ss_dssp CCCTTCCGGGGHHHHHHHHHHHHHHH-HHHC---TTSEEEECSSCHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHH-HhhC---CCeEEEEECCCcch
Confidence 2 2355666666 5543 55566656676553
No 273
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.53 E-value=8.1e-05 Score=68.79 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=53.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC-------c-cc--cChHHHhhcCCEEEEeeC
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD-------F-AL--NDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g-------~-~~--~s~~e~~~~aDvIilaV~ 133 (341)
.+++.|+|+|.+|.+++..|.+.|. .+|++++|++++++.++++++ + .. .+..+.+.++|+||-|+|
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~---~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGV---QKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---SEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC---CEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence 4689999999999999999999984 479999999999887765331 1 11 255666778888888887
Q ss_pred h
Q psy316 134 P 134 (341)
Q Consensus 134 ~ 134 (341)
.
T Consensus 204 ~ 204 (283)
T 3jyo_A 204 M 204 (283)
T ss_dssp T
T ss_pred C
Confidence 4
No 274
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.00011 Score=72.75 Aligned_cols=75 Identities=12% Similarity=0.178 Sum_probs=55.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-----ccc---ChHHHhhcCCEEEEeeChH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-----ALN---DNHRIIKEAEYVFLAMKPQ 135 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-----~~~---s~~e~~~~aDvIilaV~~~ 135 (341)
.++|.|||+|.+|.+++..|.+.+- .+|++++|++++++.+.++.++ ... +..++++.+|+||.|+|+.
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g---~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDD---INVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTT---EEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred CCEEEEECChHHHHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchh
Confidence 3689999999999999999998831 4899999999988877543232 111 3345677899999999976
Q ss_pred HHHHHH
Q psy316 136 YLDSAI 141 (341)
Q Consensus 136 ~v~~vl 141 (341)
....+.
T Consensus 100 ~~~~v~ 105 (467)
T 2axq_A 100 FHPNVV 105 (467)
T ss_dssp GHHHHH
T ss_pred hhHHHH
Confidence 433443
No 275
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.49 E-value=0.0002 Score=64.98 Aligned_cols=82 Identities=15% Similarity=0.169 Sum_probs=59.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
--|||++||+|+||+.+++. . ++ .-+.+|+ ++... +|+ .+.|.++++.++|+|+.|-.++++.+.+
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~l---eLv~v~~---~k~ge----lgv~a~~d~d~lla~pD~VVe~A~~~av~e~~ 77 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NF---EKIYAYD---RISKD----IPGVVRLDEFQVPSDVSTVVECASPEAVKEYS 77 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CC---SEEEEEC---SSCCC----CSSSEECSSCCCCTTCCEEEECSCHHHHHHHH
T ss_pred ccceEEEECcCHHHHHHHhc--C-Cc---EEEEEEe---ccccc----cCceeeCCHHHHhhCCCEEEECCCHHHHHHHH
Confidence 34799999999999999997 3 54 3456787 34332 366 6777888878999999999999888866
Q ss_pred HHhhhcccccCCCcEEEEecCC
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag 163 (341)
..+ | ..|.-+|+++.|
T Consensus 78 ~~i----L--~aG~dvv~~S~g 93 (253)
T 1j5p_A 78 LQI----L--KNPVNYIIISTS 93 (253)
T ss_dssp HHH----T--TSSSEEEECCGG
T ss_pred HHH----H--HCCCCEEEcChh
Confidence 555 5 566655555443
No 276
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.49 E-value=0.00015 Score=68.98 Aligned_cols=92 Identities=21% Similarity=0.185 Sum_probs=58.5
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhh----hhhcCcCC-------C---ccc--cChHHHhh-c
Q psy316 63 MWTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERF----KLHWPEPM-------D---FAL--NDNHRIIK-E 124 (341)
Q Consensus 63 m~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~----~~~l~~~~-------g---~~~--~s~~e~~~-~ 124 (341)
|++||+|+| .|.+|..+++.|.++. ..+|....+++.. +......+ + +.. .+..+..+ .
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p---~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHP---MFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFED 83 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCS---SEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTT
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCC---CCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCC
Confidence 667999999 7999999999887654 2467655432211 11110000 0 111 14445446 8
Q ss_pred CCEEEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCC
Q psy316 125 AEYVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 125 aDvIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~ag 163 (341)
+|+||+|+|.....+....+ + ..+..||+..+.
T Consensus 84 ~DvV~~atp~~~~~~~a~~~----~--~aG~~VId~s~~ 116 (354)
T 1ys4_A 84 VDIVFSALPSDLAKKFEPEF----A--KEGKLIFSNASA 116 (354)
T ss_dssp CCEEEECCCHHHHHHHHHHH----H--HTTCEEEECCST
T ss_pred CCEEEECCCchHHHHHHHHH----H--HCCCEEEECCch
Confidence 99999999998877777665 3 456678887653
No 277
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.48 E-value=7.7e-05 Score=65.99 Aligned_cols=78 Identities=10% Similarity=-0.091 Sum_probs=56.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhc-CCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhh-cCCEEEEeeChHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRT-GLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIK-EAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~-G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~-~aDvIilaV~~~~v~~v 140 (341)
.++++|||+|++|..+++.+... |+ .-+.++|.++++.......+++ ...+..+.++ +.|+|++|+|.....++
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~g~---~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~~~~ei 156 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGESF---ELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPREAAQKA 156 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCSSE---EEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcCCc---EEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCchhHHHH
Confidence 46899999999999999853221 32 2355889998887655443344 4566777765 58999999998877777
Q ss_pred HHHh
Q psy316 141 IQGL 144 (341)
Q Consensus 141 l~~i 144 (341)
...+
T Consensus 157 ~~~l 160 (211)
T 2dt5_A 157 ADLL 160 (211)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7665
No 278
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.46 E-value=0.0002 Score=67.87 Aligned_cols=76 Identities=13% Similarity=0.113 Sum_probs=50.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCc------------------cccChHHHhhcC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDF------------------ALNDNHRIIKEA 125 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~------------------~~~s~~e~~~~a 125 (341)
+||||+|+|.||+.+++.|.++.. -+| .+.+++++....+..+.|+ ...+.+++..++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~---~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~v 78 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPD---MKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTS 78 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTT---EEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCC---CEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCC
Confidence 589999999999999999886542 244 5778876554333222232 122334555689
Q ss_pred CEEEEeeChHHHHHHHHH
Q psy316 126 EYVFLAMKPQYLDSAIQG 143 (341)
Q Consensus 126 DvIilaV~~~~v~~vl~~ 143 (341)
|+||.|+|+....+....
T Consensus 79 DvV~~aTp~~~s~~~a~~ 96 (340)
T 1b7g_O 79 DIVVDTTPNGVGAQYKPI 96 (340)
T ss_dssp SEEEECCSTTHHHHHHHH
T ss_pred CEEEECCCCchhHHHHHH
Confidence 999999998765555543
No 279
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.45 E-value=0.00021 Score=70.28 Aligned_cols=68 Identities=10% Similarity=0.186 Sum_probs=53.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC-c-----ccc---ChHHHhhcCCEEEEeeChH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD-F-----ALN---DNHRIIKEAEYVFLAMKPQ 135 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g-~-----~~~---s~~e~~~~aDvIilaV~~~ 135 (341)
++|.|+|+|.+|.+++..|.+.|. +|++++|++++++.+.++++ + ... +..++++++|+||.|+++.
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~----~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGI----KVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTC----EEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhCcC----EEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 579999999999999999998884 89999999999888876553 2 122 2335677899999999875
Q ss_pred H
Q psy316 136 Y 136 (341)
Q Consensus 136 ~ 136 (341)
.
T Consensus 80 ~ 80 (450)
T 1ff9_A 80 F 80 (450)
T ss_dssp C
T ss_pred c
Confidence 3
No 280
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.44 E-value=0.00011 Score=72.01 Aligned_cols=78 Identities=19% Similarity=0.223 Sum_probs=55.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCe-EEEEcCChhhhhhcCcCC-C----------------------c-cccCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQ-IIASAPSERFKLHWPEPM-D----------------------F-ALNDN 118 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~-V~v~~r~~e~~~~l~~~~-g----------------------~-~~~s~ 118 (341)
+.||||||+|.||+.++..+.+. +..+ +.+++|++++++.+.+++ | . .++|.
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~---~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ 99 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARM---QGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDN 99 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS---SSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCH
T ss_pred ceEEEEECChHHHHHHHHHHhhC---CCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCH
Confidence 46899999999999999887653 2234 458999999887654322 3 3 56788
Q ss_pred HHHhh--cCCEEEEeeCh-HH-HHHHHHHh
Q psy316 119 HRIIK--EAEYVFLAMKP-QY-LDSAIQGL 144 (341)
Q Consensus 119 ~e~~~--~aDvIilaV~~-~~-v~~vl~~i 144 (341)
++++. +.|+|++|+|+ .. .+-++..+
T Consensus 100 eeLL~d~dIDaVviaTp~p~~H~e~a~~AL 129 (446)
T 3upl_A 100 DLILSNPLIDVIIDATGIPEVGAETGIAAI 129 (446)
T ss_dssp HHHHTCTTCCEEEECSCCHHHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEEcCCChHHHHHHHHHHH
Confidence 88887 58999999974 43 33343444
No 281
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.44 E-value=9e-05 Score=73.14 Aligned_cols=70 Identities=14% Similarity=0.197 Sum_probs=54.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cccC---h---HHH-hhcCCEEEEeeCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALND---N---HRI-IKEAEYVFLAMKP 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~s---~---~e~-~~~aDvIilaV~~ 134 (341)
.|||-|+|+|.+|..+|+.|.+.| ++|++.++++++++.+.+++++ ...+ + .++ +++||+++.++..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~----~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGEN----NDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTT----EEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC----CCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence 378999999999999999998888 5999999999999988776665 2222 2 222 5689998888876
Q ss_pred HHH
Q psy316 135 QYL 137 (341)
Q Consensus 135 ~~v 137 (341)
+..
T Consensus 79 De~ 81 (461)
T 4g65_A 79 DET 81 (461)
T ss_dssp HHH
T ss_pred hHH
Confidence 543
No 282
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.44 E-value=0.00041 Score=64.13 Aligned_cols=76 Identities=9% Similarity=0.045 Sum_probs=51.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCCCccccChHHHhh--cCCEEEEeeChHHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPMDFALNDNHRIIK--EAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~g~~~~s~~e~~~--~aDvIilaV~~~~v~~v 140 (341)
++||||||+|.||...++.|.+....+..++ .+++|++ +.+++|+...+.+++++ +.|+|++|+|+....++
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-----~a~~~g~~~~~~~ell~~~~vD~V~i~tp~~~H~~~ 81 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-----LGSLDEVRQISLEDALRSQEIDVAYICSESSSHEDY 81 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-----CCEETTEEBCCHHHHHHCSSEEEEEECSCGGGHHHH
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-----HHHHcCCCCCCHHHHhcCCCCCEEEEeCCcHhHHHH
Confidence 4699999999999999988865200011244 4788763 23335663368888886 68999999998765555
Q ss_pred HHHh
Q psy316 141 IQGL 144 (341)
Q Consensus 141 l~~i 144 (341)
....
T Consensus 82 ~~~a 85 (294)
T 1lc0_A 82 IRQF 85 (294)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 283
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.42 E-value=0.00018 Score=69.80 Aligned_cols=78 Identities=17% Similarity=0.173 Sum_probs=56.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC------c-----c---ccChHHHhhc--CCEE
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD------F-----A---LNDNHRIIKE--AEYV 128 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g------~-----~---~~s~~e~~~~--aDvI 128 (341)
+||+|||+|.+|+.+++.|.+.|.+. .+|++++|++++++.+.++++ + - ..+..+++++ +|+|
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~-~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV 80 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVF-SHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV 80 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTC-CEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCc-eEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence 68999999999999999999887210 389999999998877654321 2 1 1233455666 8999
Q ss_pred EEeeChHHHHHHHHH
Q psy316 129 FLAMKPQYLDSAIQG 143 (341)
Q Consensus 129 ilaV~~~~v~~vl~~ 143 (341)
|.++++..-..+++.
T Consensus 81 in~ag~~~~~~v~~a 95 (405)
T 4ina_A 81 LNIALPYQDLTIMEA 95 (405)
T ss_dssp EECSCGGGHHHHHHH
T ss_pred EECCCcccChHHHHH
Confidence 999998655555543
No 284
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.38 E-value=0.00017 Score=68.73 Aligned_cols=86 Identities=15% Similarity=0.133 Sum_probs=61.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCcc---c----cChHHHhhcCCEEEEeeChHH-
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFA---L----NDNHRIIKEAEYVFLAMKPQY- 136 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~---~----~s~~e~~~~aDvIilaV~~~~- 136 (341)
.++.|+|+|.+|.++++.+...|. +|++++|++++++.+.+..+.. . .+..+.+..+|+||-|++...
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga----~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGA----QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC----EEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 689999999999999999999984 8999999999888775521111 1 123455678999999985322
Q ss_pred ------HHHHHHHhhhcccccCCCcEEEEec
Q psy316 137 ------LDSAIQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 137 ------v~~vl~~i~~~~l~~~~~~iIVs~~ 161 (341)
.++.+ ..+ +++.+|+++.
T Consensus 244 ~~~~li~~~~~-----~~~--~~g~~ivdv~ 267 (361)
T 1pjc_A 244 RAPILVPASLV-----EQM--RTGSVIVDVA 267 (361)
T ss_dssp SCCCCBCHHHH-----TTS--CTTCEEEETT
T ss_pred CCCeecCHHHH-----hhC--CCCCEEEEEe
Confidence 22333 234 6777888764
No 285
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.36 E-value=0.0011 Score=61.54 Aligned_cols=92 Identities=12% Similarity=0.151 Sum_probs=65.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhh--c-CCEEEEeeChHHHH
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIK--E-AEYVFLAMKPQYLD 138 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~--~-aDvIilaV~~~~v~ 138 (341)
+.++.|+|+ |+||+.+++.|.+.|+ + .++..+|.+... +-+|+ .+.+..++.. . +|++++++||..+.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~----~-~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~~ 85 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGT----K-VVAGVTPGKGGS--EVHGVPVYDSVKEALAEHPEINTSIVFVPAPFAP 85 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTC----E-EEEEECTTCTTC--EETTEEEESSHHHHHHHCTTCCEEEECCCGGGHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCC----c-EEEEeCCCCCCc--eECCEeeeCCHHHHhhcCCCCCEEEEecCHHHHH
Confidence 456888898 9999999999999885 5 333444443211 11577 7788888876 4 99999999999999
Q ss_pred HHHHHhhhcccccCCCcEEEEecCCCCHH
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLVGVDLE 167 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~agi~~~ 167 (341)
+++++. ... . =+.+|-++.|++.+
T Consensus 86 ~~v~ea-~~~---G-i~~vVi~t~G~~~~ 109 (297)
T 2yv2_A 86 DAVYEA-VDA---G-IRLVVVITEGIPVH 109 (297)
T ss_dssp HHHHHH-HHT---T-CSEEEECCCCCCHH
T ss_pred HHHHHH-HHC---C-CCEEEEECCCCCHH
Confidence 998876 331 1 23344467788864
No 286
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.34 E-value=0.00015 Score=68.00 Aligned_cols=88 Identities=10% Similarity=0.148 Sum_probs=62.5
Q ss_pred CCeEEEEcccHH-HHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc----c-----c--cChHHHhhcCCEEEEe
Q psy316 64 WTKVGFIGAGNM-AQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF----A-----L--NDNHRIIKEAEYVFLA 131 (341)
Q Consensus 64 ~~kIgiIG~G~m-G~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~----~-----~--~s~~e~~~~aDvIila 131 (341)
.+++.|||.|+| |..+++.|...|. +|++++|+..+......+++. . + .+..+.+.++|+||.+
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gA----tVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsA 252 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGA----TVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITG 252 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSC----EEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCC----EEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEEC
Confidence 578999999986 9999999999884 899999985544333332322 1 2 4567889999999999
Q ss_pred eChHHHHHHHHHhhhcccccCCCcEEEEecC
Q psy316 132 MKPQYLDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 132 V~~~~v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+..... ++. ...+ +++.+||++..
T Consensus 253 tg~p~~--vI~---~e~v--k~GavVIDVgi 276 (320)
T 1edz_A 253 VPSENY--KFP---TEYI--KEGAVCINFAC 276 (320)
T ss_dssp CCCTTC--CBC---TTTS--CTTEEEEECSS
T ss_pred CCCCcc--eeC---HHHc--CCCeEEEEcCC
Confidence 974320 111 2346 77888888844
No 287
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.33 E-value=0.00018 Score=63.58 Aligned_cols=78 Identities=14% Similarity=0.147 Sum_probs=53.3
Q ss_pred CCeEEEEcccHHHHHHHHHHH--hcCCCCCCeEEEEcCChh-hhhh-cCcCCCc-cccChHHHhh--cCCEEEEeeChHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLI--RTGLCIPAQIIASAPSER-FKLH-WPEPMDF-ALNDNHRIIK--EAEYVFLAMKPQY 136 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~--~~G~~~~~~V~v~~r~~e-~~~~-l~~~~g~-~~~s~~e~~~--~aDvIilaV~~~~ 136 (341)
..+++|||+|++|.++++.+. +.|+ .-+.++|.+++ +... ......+ ...+..+.++ +.|++|+|+|...
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~---~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~~ 160 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKM---QISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPSTE 160 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSE---EEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCe---EEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCchh
Confidence 468999999999999988742 2232 23457899987 6544 2221223 3456677766 5999999999877
Q ss_pred HHHHHHHh
Q psy316 137 LDSAIQGL 144 (341)
Q Consensus 137 v~~vl~~i 144 (341)
..++.+.+
T Consensus 161 aq~v~d~l 168 (212)
T 3keo_A 161 AQEVADIL 168 (212)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777665
No 288
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.30 E-value=0.00029 Score=66.28 Aligned_cols=98 Identities=11% Similarity=0.087 Sum_probs=62.3
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhh--hhhcCcC-C--Cc-c---ccChHHHhhcCCEEEEee
Q psy316 63 MWTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERF--KLHWPEP-M--DF-A---LNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 63 m~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~--~~~l~~~-~--g~-~---~~s~~e~~~~aDvIilaV 132 (341)
++|||+||| +|.+|..++..|+..|. .++|.++|++++. +..+... . .+ . .++..++++++|+||++.
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~--~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~a 84 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPL--VSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA 84 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTT--EEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC--CCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcC
Confidence 457999999 79999999999988773 2489999987652 1122221 1 12 2 224567789999999997
Q ss_pred C----h------------HHHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 133 K----P------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 133 ~----~------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
. + ..++++++.+ ..+ .++.+|+-.++++..
T Consensus 85 g~~~~~g~~r~dl~~~N~~~~~~i~~~i-~~~---~p~~~viv~SNPv~~ 130 (326)
T 1smk_A 85 GVPRKPGMTRDDLFKINAGIVKTLCEGI-AKC---CPRAIVNLISNPVNS 130 (326)
T ss_dssp CCCCCSSCCCSHHHHHHHHHHHHHHHHH-HHH---CTTSEEEECCSSHHH
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHH-Hhh---CCCeEEEEECCchHH
Confidence 3 2 2344555555 443 345555545555443
No 289
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.23 E-value=0.0018 Score=58.43 Aligned_cols=81 Identities=14% Similarity=0.217 Sum_probs=54.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc-CCCCCCeEE-EEcCChhhhhhcCcCCCccccChHHHhh-cCCEEEEeeChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRT-GLCIPAQII-ASAPSERFKLHWPEPMDFALNDNHRIIK-EAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~-G~~~~~~V~-v~~r~~e~~~~l~~~~g~~~~s~~e~~~-~aDvIilaV~~~~v~~v 140 (341)
|||+|+|+ |+||+.+++.+.+. + .++. +++++ .+..+++. .+|+||-++.|..+.+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~----~elva~~d~~---------------~dl~~~~~~~~DvvIDfT~p~a~~~~ 61 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADD----LTLSAELDAG---------------DPLSLLTDGNTEVVIDFTHPDVVMGN 61 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTT----CEEEEEECTT---------------CCTHHHHHTTCCEEEECSCTTTHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC----CEEEEEEccC---------------CCHHHHhccCCcEEEEccChHHHHHH
Confidence 58999997 99999999998765 5 3665 66653 12344443 78999988888887777
Q ss_pred HHHhhhcccccCCCcEEEEecCCCCHHHHH
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVGVDLETLK 170 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~agi~~~~l~ 170 (341)
+... . ..+.-+|..+.|.+.++++
T Consensus 62 ~~~a-~-----~~g~~~VigTTG~~~e~~~ 85 (245)
T 1p9l_A 62 LEFL-I-----DNGIHAVVGTTGFTAERFQ 85 (245)
T ss_dssp HHHH-H-----HTTCEEEECCCCCCHHHHH
T ss_pred HHHH-H-----HcCCCEEEcCCCCCHHHHH
Confidence 7554 2 2344344445678876553
No 290
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.21 E-value=0.00024 Score=64.45 Aligned_cols=65 Identities=12% Similarity=0.125 Sum_probs=49.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--c---ccChHHHhhcCCEEEEeeC
Q psy316 62 PMWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--A---LNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 62 ~m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~---~~s~~e~~~~aDvIilaV~ 133 (341)
+|+|||.|+|+|.+|+.+++.|++.|+ +|++.+|++.+.+.+.. .++ . ..+.. +..+|+||-+..
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQGW----RIIGTSRNPDQMEAIRA-SGAEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGTC----EEEEEESCGGGHHHHHH-TTEEEEESSSSCCC--CTTCCEEEECCC
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCCC----EEEEEEcChhhhhhHhh-CCCeEEEecccccc--cCCCCEEEECCC
Confidence 478999999999999999999999984 99999999887766544 243 1 22222 678999998874
No 291
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.20 E-value=0.0011 Score=61.89 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=62.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhc-CCCCCCeEEEEcCChh---hhhhcCcC-CCc-cc----cChHHHhhcCCEEEEee-
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRT-GLCIPAQIIASAPSER---FKLHWPEP-MDF-AL----NDNHRIIKEAEYVFLAM- 132 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~-G~~~~~~V~v~~r~~e---~~~~l~~~-~g~-~~----~s~~e~~~~aDvIilaV- 132 (341)
|||+||| +|++|.+++..|... ++ ..++.++|+++. .+..+... +.. .. .+..+.+++||+||++.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~--~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag 78 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPS--GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAG 78 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCT--TEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC--CceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCC
Confidence 6899999 899999999998876 54 368999999861 12222221 122 21 25678899999999987
Q ss_pred ---ChH------------HHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 133 ---KPQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 133 ---~~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
+|. .++++.+.+ ..+ .++.+++..++.+..
T Consensus 79 ~~rkpG~~R~dll~~N~~I~~~i~~~i-~~~---~p~a~vlvvtNPvd~ 123 (312)
T 3hhp_A 79 VARKPGMDRSDLFNVNAGIVKNLVQQV-AKT---CPKACIGIITNPVNT 123 (312)
T ss_dssp CSCCTTCCHHHHHHHHHHHHHHHHHHH-HHH---CTTSEEEECSSCHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHH-HHH---CCCcEEEEecCcchh
Confidence 231 133444444 443 366677777676553
No 292
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.20 E-value=0.00029 Score=66.64 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=50.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCC------------------Cc-cccChHHHhhc
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPM------------------DF-ALNDNHRIIKE 124 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~------------------g~-~~~s~~e~~~~ 124 (341)
+||||+|+|.+|..+++.|.++.. -++ .+.++++.....+..+. ++ ...+..+++.+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~---~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~ 78 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDD---MKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDE 78 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSS---EEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHT
T ss_pred eEEEEEeECHHHHHHHHHHHcCCC---cEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcC
Confidence 689999999999999999887531 244 45677654333222111 12 22345666678
Q ss_pred CCEEEEeeChHHHHHHHHHh
Q psy316 125 AEYVFLAMKPQYLDSAIQGL 144 (341)
Q Consensus 125 aDvIilaV~~~~v~~vl~~i 144 (341)
+|+||.|+|.....+.....
T Consensus 79 vDvV~~atp~~~~~~~a~~~ 98 (337)
T 1cf2_P 79 ADIVIDCTPEGIGAKNLKMY 98 (337)
T ss_dssp CSEEEECCSTTHHHHHHHHH
T ss_pred CCEEEECCCchhhHHHHHHH
Confidence 99999999987766655544
No 293
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.18 E-value=0.0009 Score=59.19 Aligned_cols=67 Identities=12% Similarity=0.089 Sum_probs=49.9
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--c---ccC---hHHHhhcCCEEEEeeCh
Q psy316 64 WTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--A---LND---NHRIIKEAEYVFLAMKP 134 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~---~~s---~~e~~~~aDvIilaV~~ 134 (341)
+++|.|.| .|.+|.++++.|++.|. ++|++++|++++++.+... ++ . ..+ ..++++.+|+||.+...
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~---~~V~~~~R~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQT---IKQTLFARQPAKIHKPYPT-NSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT---EEEEEEESSGGGSCSSCCT-TEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCC---ceEEEEEcChhhhcccccC-CcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 46788888 59999999999999882 4999999998887765542 33 1 122 34557789999988754
No 294
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.18 E-value=0.00062 Score=67.28 Aligned_cols=88 Identities=11% Similarity=0.128 Sum_probs=65.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChH-HHHH-HH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQ-YLDS-AI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~-~v~~-vl 141 (341)
.++++|+|+|.+|.++++.|...|. +|++++|++.+++.... .++...+.++++..+|+++.+.... .+.. .+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA----~Viv~D~~~~~a~~Aa~-~g~dv~~lee~~~~aDvVi~atG~~~vl~~e~l 339 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGA----RVIVTEIDPICALQATM-EGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHM 339 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHH-TTCEECCGGGTTTTCSEEEECSSCSCSBCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHH-hCCccCCHHHHHHhcCEEEeCCCChhhhhHHHH
Confidence 4789999999999999999999995 99999999988766555 3553446678888999999887532 2222 23
Q ss_pred HHhhhcccccCCCcEEEEecCC
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag 163 (341)
. .+ +++.+|+....+
T Consensus 340 ~-----~m--k~gaiVvNaG~~ 354 (488)
T 3ond_A 340 K-----KM--KNNAIVCNIGHF 354 (488)
T ss_dssp T-----TS--CTTEEEEESSST
T ss_pred H-----hc--CCCeEEEEcCCC
Confidence 2 34 677788776443
No 295
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.16 E-value=0.00063 Score=64.41 Aligned_cols=93 Identities=11% Similarity=0.144 Sum_probs=56.7
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEE-cCC-hhhhhhcCcCCCcccc--ChHHHhhcCCEEEEeeChHHH
Q psy316 63 MWTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIAS-APS-ERFKLHWPEPMDFALN--DNHRIIKEAEYVFLAMKPQYL 137 (341)
Q Consensus 63 m~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~-~r~-~e~~~~l~~~~g~~~~--s~~e~~~~aDvIilaV~~~~v 137 (341)
|+|||+|+| .|.+|..+.+.|.+.++ +..++... +++ ..+.-.+.. ..+... +. +.+..+|+||+|++...-
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~-~~~elv~i~s~~~~g~~~~~~g-~~i~~~~~~~-~~~~~~DvV~~a~g~~~s 81 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDF-PLHRLHLLASAESAGQRMGFAE-SSLRVGDVDS-FDFSSVGLAFFAAAAEVS 81 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTC-CCSCEEEEECTTTTTCEEEETT-EEEECEEGGG-CCGGGCSEEEECSCHHHH
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEEecCCCCCCccccCC-cceEEecCCH-HHhcCCCEEEEcCCcHHH
Confidence 567999999 79999999999986654 33455544 432 211111111 011111 22 235689999999998876
Q ss_pred HHHHHHhhhcccccCCCcEEEEecCCC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLVGV 164 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~agi 164 (341)
.+....+ + ..+..+|++++..
T Consensus 82 ~~~a~~~----~--~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 82 RAHAERA----R--AAGCSVIDLSGAL 102 (340)
T ss_dssp HHHHHHH----H--HTTCEEEETTCTT
T ss_pred HHHHHHH----H--HCCCEEEEeCCCC
Confidence 6766554 3 3455677765543
No 296
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.16 E-value=0.0011 Score=62.85 Aligned_cols=101 Identities=6% Similarity=0.056 Sum_probs=64.2
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC----C---ccccChHHHhhcCCEEEEeeChH
Q psy316 64 WTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM----D---FALNDNHRIIKEAEYVFLAMKPQ 135 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~----g---~~~~s~~e~~~~aDvIilaV~~~ 135 (341)
++||+|+| .|.+|..+.+.|.++. ..++....+....-.++.+.+ | +...+..+ +..+|+||+|++..
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p---~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~ 79 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHP---YLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHG 79 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCT---TEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCC---CcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcH
Confidence 47999999 6999999999998764 236665544322222222111 1 11222333 47899999999988
Q ss_pred HHHHHHHHhhhcccccCCCcEEEEecCCCC---HHHHHHhcc
Q psy316 136 YLDSAIQGLVNDKVTLNSSRCIISMLVGVD---LETLKKKLS 174 (341)
Q Consensus 136 ~v~~vl~~i~~~~l~~~~~~iIVs~~agi~---~~~l~~~l~ 174 (341)
...+....+ + ..|..||++++..- .+..++|++
T Consensus 80 ~s~~~a~~~----~--~aG~~VId~Sa~~r~~~~~~y~~~y~ 115 (345)
T 2ozp_A 80 VFAREFDRY----S--ALAPVLVDLSADFRLKDPELYRRYYG 115 (345)
T ss_dssp HHHHTHHHH----H--TTCSEEEECSSTTSCSCHHHHHHHHC
T ss_pred HHHHHHHHH----H--HCCCEEEEcCccccCCChHHHHhhhc
Confidence 776666554 3 46777898876542 455666665
No 297
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.13 E-value=0.00082 Score=62.49 Aligned_cols=95 Identities=15% Similarity=0.203 Sum_probs=61.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcC--ChhhhhhcCcC--------CCc-cccChHHHhhcCCEEEEee
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAP--SERFKLHWPEP--------MDF-ALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r--~~e~~~~l~~~--------~g~-~~~s~~e~~~~aDvIilaV 132 (341)
|||+||| +|.+|++++..|+..++ ..++.++|+ ++++++....+ ..+ ...+..++++++|+||++.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~--~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~a 78 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI--ADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITA 78 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC--CSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC--CCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcC
Confidence 6899999 99999999999988875 247999999 77654321110 112 1113366789999999987
Q ss_pred C----h------------HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 133 K----P------------QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 133 ~----~------------~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
. + ..++++++.+ ..+ .++.+|+..++.+.
T Consensus 79 g~~~~~g~~r~dl~~~N~~i~~~i~~~i-~~~---~p~~~viv~SNPv~ 123 (303)
T 1o6z_A 79 GIPRQPGQTRIDLAGDNAPIMEDIQSSL-DEH---NDDYISLTTSNPVD 123 (303)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHH-HTT---CSCCEEEECCSSHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHH---CCCcEEEEeCChHH
Confidence 3 2 1244455555 443 35556665556554
No 298
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.13 E-value=0.00092 Score=64.08 Aligned_cols=92 Identities=14% Similarity=0.122 Sum_probs=67.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCC----hhhh----hh----cCcCCCc--cccChHHHhhcCCEEE
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPS----ERFK----LH----WPEPMDF--ALNDNHRIIKEAEYVF 129 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~----~e~~----~~----l~~~~g~--~~~s~~e~~~~aDvIi 129 (341)
..||.|+|+|.+|..+++.|...|. .+|+++||+ .++. .. +.++.+. ...++.++++.+|++|
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~---~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlI 268 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGV---KNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFI 268 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC---CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCC---CeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEE
Confidence 3689999999999999999999994 589999998 5552 22 2222221 3457899999999999
Q ss_pred EeeChHH-HHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 130 LAMKPQY-LDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 130 laV~~~~-v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
=+..|.. -+++++.+ .++.+|+.+++..+
T Consensus 269 G~Sap~l~t~emVk~M-------a~~pIIfalSNPt~ 298 (388)
T 1vl6_A 269 GVSRGNILKPEWIKKM-------SRKPVIFALANPVP 298 (388)
T ss_dssp ECSCSSCSCHHHHTTS-------CSSCEEEECCSSSC
T ss_pred EeCCCCccCHHHHHhc-------CCCCEEEEcCCCCC
Confidence 7775543 34555555 45669999888754
No 299
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.07 E-value=0.00049 Score=64.39 Aligned_cols=68 Identities=18% Similarity=0.214 Sum_probs=50.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCC---hhhhhhcCcCC----Cc-----cccCh---HHHhhcCCEE
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPS---ERFKLHWPEPM----DF-----ALNDN---HRIIKEAEYV 128 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~---~e~~~~l~~~~----g~-----~~~s~---~e~~~~aDvI 128 (341)
.+++.|+|+|.+|.+++..|.+.|. .+|++++|+ .++++.+.+++ +. ...+. .+.+.++|+|
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~---~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGI---KEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---SEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCC---CEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 4689999999999999999999984 589999999 77777765432 21 11222 3445677777
Q ss_pred EEeeCh
Q psy316 129 FLAMKP 134 (341)
Q Consensus 129 ilaV~~ 134 (341)
|-|+|.
T Consensus 225 INaTp~ 230 (312)
T 3t4e_A 225 TNGTKV 230 (312)
T ss_dssp EECSST
T ss_pred EECCcC
Confidence 777764
No 300
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.04 E-value=0.0015 Score=63.98 Aligned_cols=86 Identities=13% Similarity=0.210 Sum_probs=58.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhc--------CCCCCCe-EEEEcCChhhhhhcCcCCCc-cccChHHHhh--cCCEEEEee
Q psy316 65 TKVGFIGAGNMAQAVATSLIRT--------GLCIPAQ-IIASAPSERFKLHWPEPMDF-ALNDNHRIIK--EAEYVFLAM 132 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~--------G~~~~~~-V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~--~aDvIilaV 132 (341)
.||||||+|++|+.+++.|.++ |. ..+ +.+++|++++.+.+.. +. .+.+..+++. +.|+|+.|+
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~--~i~lvaV~d~~~~~~~~~~~--~~~~~~d~~ell~d~diDvVve~t 86 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGR--EIRVVRAAVRNLDKAEALAG--GLPLTTNPFDVVDDPEIDIVVELI 86 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSS--CEEEEEEECSCHHHHHHHHT--TCCEESCTHHHHTCTTCCEEEECC
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCC--CEEEEEEEECCHHHhhhhcc--cCcccCCHHHHhcCCCCCEEEEcC
Confidence 5899999999999999877642 21 123 4589999988776532 34 6678888886 579999999
Q ss_pred Ch-HHHHHHHHHhhhcccccCCCcEEEEe
Q psy316 133 KP-QYLDSAIQGLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 133 ~~-~~v~~vl~~i~~~~l~~~~~~iIVs~ 160 (341)
|+ ....+.+... + ..|+-|++-
T Consensus 87 p~~~~h~~~~~~A----L--~aGKhVvte 109 (444)
T 3mtj_A 87 GGLEPARELVMQA----I--ANGKHVVTA 109 (444)
T ss_dssp CSSTTHHHHHHHH----H--HTTCEEEEC
T ss_pred CCchHHHHHHHHH----H--HcCCEEEEC
Confidence 85 5444544332 3 345555543
No 301
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.04 E-value=0.0026 Score=54.90 Aligned_cols=65 Identities=17% Similarity=0.203 Sum_probs=49.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccC----hHHHhhcCCEEEEeeC
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALND----NHRIIKEAEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s----~~e~~~~aDvIilaV~ 133 (341)
|||.|+|+ |.+|+.+++.|++.|+ +|++.+|++++++.+.........| ..+.+..+|+||.+..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 70 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH----EVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYG 70 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC----EEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCc
Confidence 58999995 9999999999999994 9999999998877664211111111 1256788999998874
No 302
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.04 E-value=0.0013 Score=62.09 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=64.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEE-cCCh--h---hhhh----cCcCCCcccc---ChHHHhhcCCEE
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIAS-APSE--R---FKLH----WPEPMDFALN---DNHRIIKEAEYV 128 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~-~r~~--e---~~~~----l~~~~g~~~~---s~~e~~~~aDvI 128 (341)
| +||+|+|+ |.+|..+.+.|.++- ..++... .++. . ++.. +.......+. +..+.+.++|+|
T Consensus 4 M-~kv~IvGatG~vG~~l~~~L~~~p---~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvv 79 (337)
T 3dr3_A 4 M-LNTLIVGASGYAGAELVTYVNRHP---HMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVV 79 (337)
T ss_dssp C-EEEEEETTTSHHHHHHHHHHHHCT---TEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEE
T ss_pred c-eEEEEECCCChHHHHHHHHHHhCC---CCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEE
Confidence 5 79999995 999999999888753 2466543 3320 1 1111 2221122111 344444899999
Q ss_pred EEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCC---CHHHHHHhcc
Q psy316 129 FLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGV---DLETLKKKLS 174 (341)
Q Consensus 129 ilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi---~~~~l~~~l~ 174 (341)
|+|+|...-.+....+ + ..+..||++++.. +.+.-.+|.+
T Consensus 80 f~a~p~~~s~~~~~~~----~--~~g~~vIDlSa~fR~~d~~v~~~wy~ 122 (337)
T 3dr3_A 80 FLATAHEVSHDLAPQF----L--EAGCVVFDLSGAFRVNDATFYEKYYG 122 (337)
T ss_dssp EECSCHHHHHHHHHHH----H--HTTCEEEECSSTTSSSCHHHHHHHTS
T ss_pred EECCChHHHHHHHHHH----H--HCCCEEEEcCCccccCCcccchhhcc
Confidence 9999998877777665 3 4677899987764 3445556655
No 303
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.02 E-value=0.00077 Score=63.40 Aligned_cols=99 Identities=11% Similarity=0.127 Sum_probs=64.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCC---CCCeEEEEcCC----hhhhhh----cCcC---C--Cc-cccChHHHhhcC
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLC---IPAQIIASAPS----ERFKLH----WPEP---M--DF-ALNDNHRIIKEA 125 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~---~~~~V~v~~r~----~e~~~~----l~~~---~--g~-~~~s~~e~~~~a 125 (341)
+|||+|||+ |.+|+.++..|+..|++ ...+|.++|++ +++++. +... + .+ ...+..++++++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 479999998 99999999999987742 22479999998 544432 2221 1 12 345678889999
Q ss_pred CEEEEeeC----hH------------HHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 126 EYVFLAMK----PQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 126 DvIilaV~----~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
|+||++.. +. .++++++.+ ..+- .++..||..++.+.
T Consensus 85 D~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i-~~~~--~p~a~ii~~SNPv~ 137 (329)
T 1b8p_A 85 DVALLVGARPRGPGMERKDLLEANAQIFTVQGKAI-DAVA--SRNIKVLVVGNPAN 137 (329)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHH-HHHS--CTTCEEEECSSSHH
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHhc--CCCeEEEEccCchH
Confidence 99998852 21 133444555 4432 25657776666543
No 304
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.01 E-value=0.0019 Score=63.84 Aligned_cols=68 Identities=18% Similarity=0.211 Sum_probs=47.6
Q ss_pred CeEEEEcccHHHHH--HHHHHHhcCCCC--CCeEEEEcCChhhhhhcC-------cCCC----c-cccChHHHhhcCCEE
Q psy316 65 TKVGFIGAGNMAQA--VATSLIRTGLCI--PAQIIASAPSERFKLHWP-------EPMD----F-ALNDNHRIIKEAEYV 128 (341)
Q Consensus 65 ~kIgiIG~G~mG~a--ia~~L~~~G~~~--~~~V~v~~r~~e~~~~l~-------~~~g----~-~~~s~~e~~~~aDvI 128 (341)
|||+|||+|..|.. +...++....++ ..+|.++|.++++++... +..| + .++|..+++++||+|
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~V 80 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADFI 80 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSEE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCEE
Confidence 68999999998744 445555433222 357999999998876421 1112 2 467888999999999
Q ss_pred EEee
Q psy316 129 FLAM 132 (341)
Q Consensus 129 ilaV 132 (341)
|+++
T Consensus 81 i~~~ 84 (477)
T 3u95_A 81 INTA 84 (477)
T ss_dssp EECC
T ss_pred EECc
Confidence 9986
No 305
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.00 E-value=0.00055 Score=64.62 Aligned_cols=76 Identities=14% Similarity=0.141 Sum_probs=51.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCC-CC----CCeE-EEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChH-H
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGL-CI----PAQI-IASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQ-Y 136 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~-~~----~~~V-~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~-~ 136 (341)
++||||||+|+||+.+++.|.+... +. ..+| .+++|++++.+.+.. ...++|.++++ +.|+|+.|++.. .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~--~~~~~d~~~ll-~iDvVve~t~~~~~ 79 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQ--ELLRAEPFDLL-EADLVVEAMGGVEA 79 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCG--GGEESSCCCCT-TCSEEEECCCCSHH
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCc--ccccCCHHHHh-CCCEEEECCCCcHH
Confidence 3689999999999999999877530 00 1133 588998765443311 11455667777 899999999865 3
Q ss_pred HHHHHH
Q psy316 137 LDSAIQ 142 (341)
Q Consensus 137 v~~vl~ 142 (341)
..+.+.
T Consensus 80 a~~~~~ 85 (332)
T 2ejw_A 80 PLRLVL 85 (332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 344543
No 306
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.00 E-value=0.00055 Score=64.50 Aligned_cols=70 Identities=14% Similarity=0.144 Sum_probs=47.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhc-------CCCCCCe-EEEEcCChhhhhh------cCcCCC-c-ccc--ChHHHhh--c
Q psy316 65 TKVGFIGAGNMAQAVATSLIRT-------GLCIPAQ-IIASAPSERFKLH------WPEPMD-F-ALN--DNHRIIK--E 124 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~-------G~~~~~~-V~v~~r~~e~~~~------l~~~~g-~-~~~--s~~e~~~--~ 124 (341)
+||+|||+|+||+.+++.|.+. |. ..+ +.+++|++++.+. +...++ . ... |..++++ +
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~--~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~ 80 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIG--EFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSAD 80 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHC--CEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSC
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCC--CEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCC
Confidence 6999999999999999999875 11 124 4578888665432 111111 1 333 7888876 5
Q ss_pred CCEEEEeeChHH
Q psy316 125 AEYVFLAMKPQY 136 (341)
Q Consensus 125 aDvIilaV~~~~ 136 (341)
.|+|+.|+|+..
T Consensus 81 iDvVv~~tp~~~ 92 (327)
T 3do5_A 81 YDVLIEASVTRV 92 (327)
T ss_dssp CSEEEECCCCC-
T ss_pred CCEEEECCCCcc
Confidence 899999999763
No 307
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.99 E-value=0.0018 Score=58.41 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=31.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSE 101 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~ 101 (341)
..+|.|||+|.+|+.+++.|...|. .+|+++|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv---~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV---GNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC---SEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC---CeEEEEcCCC
Confidence 4689999999999999999999995 6899999986
No 308
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.99 E-value=0.00077 Score=54.29 Aligned_cols=94 Identities=23% Similarity=0.207 Sum_probs=68.3
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHHH
Q psy316 64 WTKVGFIGA----GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYLD 138 (341)
Q Consensus 64 ~~kIgiIG~----G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v~ 138 (341)
+++|+|||+ |..|..+.++|.+.|+ +|+-.++..+. + .|. ...+..++-. .|++++++|++.+.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~----~V~pVnP~~~~---i---~G~~~y~sl~dlp~-vDlavi~~p~~~v~ 72 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGH----EFIPVGRKKGE---V---LGKTIINERPVIEG-VDTVTLYINPQNQL 72 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTC----CEEEESSSCSE---E---TTEECBCSCCCCTT-CCEEEECSCHHHHG
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCC----eEEEECCCCCc---C---CCeeccCChHHCCC-CCEEEEEeCHHHHH
Confidence 357999998 6799999999999995 88888764322 2 355 5566666656 99999999999999
Q ss_pred HHHHHhhhcccccCCCcEEEEecCCCCHHHHHHhcc
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLVGVDLETLKKKLS 174 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~agi~~~~l~~~l~ 174 (341)
++++++ ... ....++ +..|...+++.+...
T Consensus 73 ~~v~e~-~~~---g~k~v~--~~~G~~~~e~~~~a~ 102 (122)
T 3ff4_A 73 SEYNYI-LSL---KPKRVI--FNPGTENEELEEILS 102 (122)
T ss_dssp GGHHHH-HHH---CCSEEE--ECTTCCCHHHHHHHH
T ss_pred HHHHHH-Hhc---CCCEEE--ECCCCChHHHHHHHH
Confidence 999887 432 233343 567776666655554
No 309
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.97 E-value=0.0007 Score=63.97 Aligned_cols=79 Identities=19% Similarity=0.212 Sum_probs=49.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcC--ChhhhhhcCc------CCC----------------c-cc-
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAP--SERFKLHWPE------PMD----------------F-AL- 115 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r--~~e~~~~l~~------~~g----------------~-~~- 115 (341)
|++||||+|+|++|..+++.|.++.. -+| .+.++ +++.+..+.+ ++. + ..
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~~~---vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNSGK---VDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQ 78 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCS---SEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEEC
T ss_pred CceEEEEEccCHHHHHHHHHHHcCCC---cEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEe
Confidence 45699999999999999999887532 354 46664 5665433221 110 0 01
Q ss_pred -cChHHH-h--hcCCEEEEeeChHHHHHHHHHh
Q psy316 116 -NDNHRI-I--KEAEYVFLAMKPQYLDSAIQGL 144 (341)
Q Consensus 116 -~s~~e~-~--~~aDvIilaV~~~~v~~vl~~i 144 (341)
.+++++ . ..+|+||+|+|...-.+.....
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~ 111 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAH 111 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGG
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHH
Confidence 244444 2 4789999999987666655443
No 310
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.91 E-value=0.001 Score=62.37 Aligned_cols=68 Identities=21% Similarity=0.131 Sum_probs=49.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCC---hhhhhhcCcCC----Cc-----cccC---hHHHhhcCCEE
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPS---ERFKLHWPEPM----DF-----ALND---NHRIIKEAEYV 128 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~---~e~~~~l~~~~----g~-----~~~s---~~e~~~~aDvI 128 (341)
.+++.|+|+|.+|.+++..|.+.|. .+|++++|+ .++++.+.+++ ++ ...+ ..+.+.++|+|
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga---~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI 230 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGV---KEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF 230 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTC---SEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CCEEEEECCChHHHHHHHHHHHCCC---CEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence 4689999999999999999999984 589999999 88877765432 21 1112 23445677877
Q ss_pred EEeeCh
Q psy316 129 FLAMKP 134 (341)
Q Consensus 129 ilaV~~ 134 (341)
|-|+|.
T Consensus 231 INaTp~ 236 (315)
T 3tnl_A 231 TNATGV 236 (315)
T ss_dssp EECSST
T ss_pred EECccC
Confidence 777764
No 311
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=96.90 E-value=0.0014 Score=62.59 Aligned_cols=93 Identities=13% Similarity=0.145 Sum_probs=57.5
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEc-C-ChhhhhhcCcCCCccccC-hHHHhhcCCEEEEeeChHHHH
Q psy316 63 MWTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASA-P-SERFKLHWPEPMDFALND-NHRIIKEAEYVFLAMKPQYLD 138 (341)
Q Consensus 63 m~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~-r-~~e~~~~l~~~~g~~~~s-~~e~~~~aDvIilaV~~~~v~ 138 (341)
|++||+||| .|..|.-|.+.|.++++ +..++.... + +..+.-.+... ...+.+ ..+.+.++|+||+|+|...-.
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~-p~~el~~~as~~saG~~~~~~~~-~~~~~~~~~~~~~~~Dvvf~a~~~~~s~ 78 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTL-PIDKIRYLASARSAGKSLKFKDQ-DITIEETTETAFEGVDIALFSAGSSTSA 78 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCC-CEEEEEEEECTTTTTCEEEETTE-EEEEEECCTTTTTTCSEEEECSCHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCC-CcEEEEEEEccccCCCcceecCC-CceEeeCCHHHhcCCCEEEECCChHhHH
Confidence 678999999 59999999998888763 333444433 2 22211111110 111111 123357899999999988777
Q ss_pred HHHHHhhhcccccCCCcEEEEecCC
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~ag 163 (341)
+....+ + ..+..||++++.
T Consensus 79 ~~a~~~----~--~~G~~vIDlSa~ 97 (366)
T 3pwk_A 79 KYAPYA----V--KAGVVVVDNTSY 97 (366)
T ss_dssp HHHHHH----H--HTTCEEEECSST
T ss_pred HHHHHH----H--HCCCEEEEcCCc
Confidence 777655 3 457788988664
No 312
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=96.90 E-value=0.0038 Score=60.67 Aligned_cols=68 Identities=13% Similarity=0.195 Sum_probs=45.6
Q ss_pred CCeEEEEcccHH-HHHHHHHHHh--cCCCCCCeEEEEcCChhhhhhcC-------cCC-Cc-cccChHHHhhcCCEEEEe
Q psy316 64 WTKVGFIGAGNM-AQAVATSLIR--TGLCIPAQIIASAPSERFKLHWP-------EPM-DF-ALNDNHRIIKEAEYVFLA 131 (341)
Q Consensus 64 ~~kIgiIG~G~m-G~aia~~L~~--~G~~~~~~V~v~~r~~e~~~~l~-------~~~-g~-~~~s~~e~~~~aDvIila 131 (341)
++||+|||+|.. +..++..|+. .+ ++..+|.++|.++++++... ... .+ .+.|..+++++||+||++
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~-l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Viit 80 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISED-VRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQ 80 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTT-SCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccC-CCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEEc
Confidence 369999999984 2333344565 44 23468999999998755311 111 12 345667889999999999
Q ss_pred e
Q psy316 132 M 132 (341)
Q Consensus 132 V 132 (341)
.
T Consensus 81 a 81 (417)
T 1up7_A 81 F 81 (417)
T ss_dssp C
T ss_pred C
Confidence 8
No 313
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.88 E-value=0.0018 Score=61.37 Aligned_cols=89 Identities=16% Similarity=0.104 Sum_probs=53.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEE-EEcCChhhhhhcCcCC--------------------Cc-cccChHH
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQII-ASAPSERFKLHWPEPM--------------------DF-ALNDNHR 120 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~-v~~r~~e~~~~l~~~~--------------------g~-~~~s~~e 120 (341)
|++||||+|+|++|+.+++.|.++.. -+|. +.+++++....+.+.. ++ +..+..+
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~~~---~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~ 77 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQDD---MEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILD 77 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHSSS---EEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGG
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCC---ceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHH
Confidence 55799999999999999999987631 2443 5555544433221100 12 2223444
Q ss_pred HhhcCCEEEEeeChHHHHHHHHHhhhcccccCCCcEEEE
Q psy316 121 IIKEAEYVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIIS 159 (341)
Q Consensus 121 ~~~~aDvIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs 159 (341)
+..++|+||.|++.....+...+ .++ +.|+.||+
T Consensus 78 ~~~~vDiV~eatg~~~s~~~a~~---~~l--~aG~~VI~ 111 (343)
T 2yyy_A 78 IIEDADIVVDGAPKKIGKQNLEN---IYK--PHKVKAIL 111 (343)
T ss_dssp TGGGCSEEEECCCTTHHHHHHHH---TTT--TTTCEEEE
T ss_pred hccCCCEEEECCCccccHHHHHH---HHH--HCCCEEEE
Confidence 55689999999988764444431 234 45555553
No 314
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.85 E-value=0.0036 Score=54.46 Aligned_cols=67 Identities=21% Similarity=0.263 Sum_probs=49.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc---cccC---hHHHhhcCCEEEEeeCh
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF---ALND---NHRIIKEAEYVFLAMKP 134 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~---~~~s---~~e~~~~aDvIilaV~~ 134 (341)
+|||.|.|+ |.+|+.+++.|++.|+ +|++.+|++++.+.+...... -..+ ..++++.+|+||-+..+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGF----EVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTC----EEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC----EEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 478999985 9999999999999984 999999998877655331111 1122 34567789999988743
No 315
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.81 E-value=0.0035 Score=54.56 Aligned_cols=68 Identities=19% Similarity=0.261 Sum_probs=49.8
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHH-hcCCCCCCeEEEEcCChh-hhhhcC-cCCCc--c---ccC---hHHHhhcCCEEEE
Q psy316 63 MWTKVGFIG-AGNMAQAVATSLI-RTGLCIPAQIIASAPSER-FKLHWP-EPMDF--A---LND---NHRIIKEAEYVFL 130 (341)
Q Consensus 63 m~~kIgiIG-~G~mG~aia~~L~-~~G~~~~~~V~v~~r~~e-~~~~l~-~~~g~--~---~~s---~~e~~~~aDvIil 130 (341)
|+++|.|+| .|.+|.++++.|+ +.|+ +|++.+|+++ +++.+. ...++ . ..+ ..++++.+|+||.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDM----HITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCC----EEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCc----eEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 444599998 4999999999999 8884 9999999998 777652 11122 1 122 3456778999998
Q ss_pred eeCh
Q psy316 131 AMKP 134 (341)
Q Consensus 131 aV~~ 134 (341)
+...
T Consensus 80 ~ag~ 83 (221)
T 3r6d_A 80 GAME 83 (221)
T ss_dssp SCCC
T ss_pred cCCC
Confidence 8854
No 316
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.77 E-value=0.002 Score=60.63 Aligned_cols=90 Identities=6% Similarity=0.019 Sum_probs=56.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcC---CCC-CCeE-EEEcCChhhhhh-cC-----c---CCCc--ccc---ChHHHhh-c
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTG---LCI-PAQI-IASAPSERFKLH-WP-----E---PMDF--ALN---DNHRIIK-E 124 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G---~~~-~~~V-~v~~r~~e~~~~-l~-----~---~~g~--~~~---s~~e~~~-~ 124 (341)
+||||||+|+||+.+++.|.+.. ... ..+| .+++|++++++. +. + ..++ .+. |.++++. +
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 68999999999999999987642 000 1143 588998776554 21 1 1133 233 6777763 5
Q ss_pred CCEEEEeeChH----HHHHHHHHhhhcccccCCCcEEEEe
Q psy316 125 AEYVFLAMKPQ----YLDSAIQGLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 125 aDvIilaV~~~----~v~~vl~~i~~~~l~~~~~~iIVs~ 160 (341)
.|+|+.|+|+. ...+.+... + ..++-||+.
T Consensus 87 iDvVv~~t~~~~~~~~~~~~~~~A----L--~aGkhVvta 120 (331)
T 3c8m_A 87 FDIVVDATPASADGKKELAFYKET----F--ENGKDVVTA 120 (331)
T ss_dssp CSEEEECSCCCSSSHHHHHHHHHH----H--HTTCEEEEC
T ss_pred CCEEEECCCCCCccchHHHHHHHH----H--HCCCeEEec
Confidence 89999999984 334444332 3 455556643
No 317
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.76 E-value=0.0018 Score=61.11 Aligned_cols=92 Identities=9% Similarity=0.052 Sum_probs=57.1
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEc-C-ChhhhhhcCcCCCccccCh-HHHhhcCCEEEEeeChHHHHH
Q psy316 64 WTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASA-P-SERFKLHWPEPMDFALNDN-HRIIKEAEYVFLAMKPQYLDS 139 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~-r-~~e~~~~l~~~~g~~~~s~-~e~~~~aDvIilaV~~~~v~~ 139 (341)
++||+|+| .|.+|..+.+.|.++++ +..++...+ + +..+.-.+... .+...+. .+.+..+|+||+|++...-.+
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~-p~~elv~i~s~~~~G~~~~~~~~-~i~~~~~~~~~~~~vDvVf~a~g~~~s~~ 80 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREF-PVDELFLLASERSEGKTYRFNGK-TVRVQNVEEFDWSQVHIALFSAGGELSAK 80 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTC-CEEEEEEEECTTTTTCEEEETTE-EEEEEEGGGCCGGGCSEEEECSCHHHHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCC-CCEEEEEEECCCCCCCceeecCc-eeEEecCChHHhcCCCEEEECCCchHHHH
Confidence 47999999 89999999999988752 334565444 2 22111112110 1211111 123468999999999887666
Q ss_pred HHHHhhhcccccCCCcEEEEecCC
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~ag 163 (341)
....+ + ..+..+|+..+.
T Consensus 81 ~a~~~----~--~~G~~vId~s~~ 98 (336)
T 2r00_A 81 WAPIA----A--EAGVVVIDNTSH 98 (336)
T ss_dssp HHHHH----H--HTTCEEEECSST
T ss_pred HHHHH----H--HcCCEEEEcCCc
Confidence 66554 3 456788887654
No 318
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.76 E-value=0.002 Score=61.38 Aligned_cols=99 Identities=10% Similarity=0.160 Sum_probs=62.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC---------CccccChHHHhhcCCEEEEeeCh
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM---------DFALNDNHRIIKEAEYVFLAMKP 134 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~---------g~~~~s~~e~~~~aDvIilaV~~ 134 (341)
+||+|+| .|.+|..+++.|.++. ..++....+....-.++.+.+ .+...+ ++.++.+|+||+|+|.
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p---~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~ 92 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHP---HFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPH 92 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCS---SEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCT
T ss_pred cEEEEECcCCHHHHHHHHHHHcCC---CcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCc
Confidence 6999999 7999999999998764 236665544322211111101 111222 3445689999999998
Q ss_pred HHHHHHHHHhhhcccccCCCcEEEEecCCCC---HHHHHHhcc
Q psy316 135 QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD---LETLKKKLS 174 (341)
Q Consensus 135 ~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~---~~~l~~~l~ 174 (341)
..-.+..... ..+..||+..+..- .+..++|++
T Consensus 93 ~~s~~~a~~~-------~aG~~VId~sa~~R~~~~~~y~~~y~ 128 (359)
T 1xyg_A 93 GTTQEIIKEL-------PTALKIVDLSADFRLRNIAEYEEWYG 128 (359)
T ss_dssp TTHHHHHHTS-------CTTCEEEECSSTTTCSCHHHHHHHHS
T ss_pred hhHHHHHHHH-------hCCCEEEECCccccCCchhhhhhhhc
Confidence 7665554432 35678898876542 456777776
No 319
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=96.75 E-value=0.0019 Score=61.49 Aligned_cols=87 Identities=7% Similarity=0.083 Sum_probs=59.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhh-cCCEEEEeeChHHHH-HHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIK-EAEYVFLAMKPQYLD-SAI 141 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~-~aDvIilaV~~~~v~-~vl 141 (341)
.++++|+|+|++|...++.|...|. +|+++|+++++ ..+.++++....++.+++. +||+++-|--...+. +-+
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~~Ga----kVvvsD~~~~~-~~~a~~~ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~ 249 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAEAGA----QLLVADTDTER-VAHAVALGHTAVALEDVLSTPCDVFAPCAMGGVITTEVA 249 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSCHHH-HHHHHHTTCEECCGGGGGGCCCSEEEECSCSCCBCHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC----EEEEEeCCccH-HHHHHhcCCEEeChHHhhcCccceecHhHHHhhcCHHHH
Confidence 4799999999999999999999985 88999999776 3333446662225567777 899998653222221 222
Q ss_pred HHhhhcccccCCCcEEEEecCC
Q psy316 142 QGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~ag 163 (341)
+ .+ + .++|+..+++
T Consensus 250 ~-----~l--k-~~iVie~AN~ 263 (355)
T 1c1d_A 250 R-----TL--D-CSVVAGAANN 263 (355)
T ss_dssp H-----HC--C-CSEECCSCTT
T ss_pred h-----hC--C-CCEEEECCCC
Confidence 2 23 3 4677777665
No 320
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.68 E-value=0.0022 Score=60.91 Aligned_cols=90 Identities=16% Similarity=0.264 Sum_probs=55.0
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEc-CChhhhhhcCc---CC----------Ccccc--ChHHHhhcCC
Q psy316 64 WTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASA-PSERFKLHWPE---PM----------DFALN--DNHRIIKEAE 126 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~-r~~e~~~~l~~---~~----------g~~~~--s~~e~~~~aD 126 (341)
++||+|+| .|.+|..+.+.|.++. ..+|.... .+...-+.+.+ .+ .+.+. +..+ +.++|
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p---~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vD 79 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHP---YLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVD 79 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCS---SEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCS
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCC---CcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCC
Confidence 47899999 7999999999887653 24665543 22111111110 00 11111 3333 47899
Q ss_pred EEEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCC
Q psy316 127 YVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 127 vIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~ag 163 (341)
+||+|+|...-.+..... + ..+..||+..+.
T Consensus 80 vVf~atp~~~s~~~a~~~----~--~aG~~VId~s~~ 110 (350)
T 2ep5_A 80 VVLSALPNELAESIELEL----V--KNGKIVVSNASP 110 (350)
T ss_dssp EEEECCCHHHHHHHHHHH----H--HTTCEEEECSST
T ss_pred EEEECCChHHHHHHHHHH----H--HCCCEEEECCcc
Confidence 999999988777766554 3 356668887653
No 321
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.67 E-value=0.002 Score=60.86 Aligned_cols=90 Identities=16% Similarity=0.216 Sum_probs=54.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEE-EEcC--Chhhhhhc---CcCCC---------------------c-c
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQII-ASAP--SERFKLHW---PEPMD---------------------F-A 114 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~-v~~r--~~e~~~~l---~~~~g---------------------~-~ 114 (341)
|++||||+|+|.+|..+++.|.++. .-+|. +.++ +++.+..+ ...+| + .
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~p---~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v 78 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQSE---DVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTV 78 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCS---SEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEE
T ss_pred CceEEEEECcCHHHHHHHHHHhCCC---CeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEE
Confidence 4469999999999999999988753 23444 5553 44432222 11111 0 1
Q ss_pred c--cChHHH-h--hcCCEEEEeeChHHHHHHHHHhhhcccccCCC--cEEEEec
Q psy316 115 L--NDNHRI-I--KEAEYVFLAMKPQYLDSAIQGLVNDKVTLNSS--RCIISML 161 (341)
Q Consensus 115 ~--~s~~e~-~--~~aDvIilaV~~~~v~~vl~~i~~~~l~~~~~--~iIVs~~ 161 (341)
. .++.++ . ..+|+||.|++.....+..... + ..| ++||+..
T Consensus 79 ~~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~----l--~aGak~VVIs~p 126 (337)
T 3e5r_O 79 FGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAH----L--KGGAKKVVISAP 126 (337)
T ss_dssp ECCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHH----H--HTTCSEEEESSC
T ss_pred EecCChHHccccccCCCEEEECCCchhhHHHHHHH----H--HcCCCEEEEecC
Confidence 1 144443 1 4799999999987666655443 3 233 3888764
No 322
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.62 E-value=0.0049 Score=53.42 Aligned_cols=64 Identities=16% Similarity=0.241 Sum_probs=49.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cccCh----HHHhhcCCEEEEeeC
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALNDN----HRIIKEAEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~s~----~e~~~~aDvIilaV~ 133 (341)
|||.|+|+ |.+|+.+++.|++.|+ +|++.+|++++.+.+... ++ ...|. .+.+..+|+||-+.-
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH----EVLAVVRDPQKAADRLGA-TVATLVKEPLVLTEADLDSVDAVVDALS 71 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHTCT-TSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC----EEEEEEecccccccccCC-CceEEecccccccHhhcccCCEEEECCc
Confidence 57999987 9999999999999984 999999999888766442 33 11111 256788999998873
No 323
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.59 E-value=0.0061 Score=51.80 Aligned_cols=64 Identities=9% Similarity=0.139 Sum_probs=48.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--c---ccC---hHHHhhcCCEEEEeeC
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--A---LND---NHRIIKEAEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~---~~s---~~e~~~~aDvIilaV~ 133 (341)
|+|.|+|+ |.+|+.+++.|++.|+ +|++.+|++++.+.+.. .++ . ..+ ..++++.+|+||.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~----~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGY----EVTVLVRDSSRLPSEGP-RPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCGGGSCSSSC-CCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC----eEEEEEeChhhcccccC-CceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 68999988 9999999999999984 99999999877654422 122 1 122 3455678999998864
No 324
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.58 E-value=0.0048 Score=58.61 Aligned_cols=150 Identities=13% Similarity=0.018 Sum_probs=83.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCC--CCeEEEEc--CChhh-hhh----cCc--CCCccccChHHHhhcCCEEEEee
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCI--PAQIIASA--PSERF-KLH----WPE--PMDFALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~--~~~V~v~~--r~~e~-~~~----l~~--~~g~~~~s~~e~~~~aDvIilaV 132 (341)
+||+|+| .|.+|+.+.+.|.++++++ ..+++... |+..+ +.. +.. +.-+...+ .+.+..+|+||+|+
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~-~~~~~~~DvVf~al 88 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTE-AAVLGGHDAVFLAL 88 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECC-HHHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCC-HHHhcCCCEEEECC
Confidence 6999999 8999999999998765000 13565543 23222 222 111 11111113 33456899999999
Q ss_pred ChHHHHHHHHHhhhcccccCCCcEEEEecCCCC---HHHHHHhccccCCCCCCCCeEEEEcCCc---hhhhcCceEEEEe
Q psy316 133 KPQYLDSAIQGLVNDKVTLNSSRCIISMLVGVD---LETLKKKLSVLVPNPNDAPTIIRVMPNT---AMKYGKGITGMCH 206 (341)
Q Consensus 133 ~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~---~~~l~~~l~~~~~~~~~~~~vvr~mpn~---p~~v~~g~~~l~~ 206 (341)
+.....+++..+ ..+..+|++++..- .+..++|.+.- +..+ ++...|.. +..+.+ .. +..
T Consensus 89 g~~~s~~~~~~~-------~~G~~vIDlSa~~R~~~~~~~~~~y~~~----h~~~-~vyglPEv~~n~~~i~~-~~-iIa 154 (352)
T 2nqt_A 89 PHGHSAVLAQQL-------SPETLIIDCGADFRLTDAAVWERFYGSS----HAGS-WPYGLPELPGARDQLRG-TR-RIA 154 (352)
T ss_dssp TTSCCHHHHHHS-------CTTSEEEECSSTTTCSCHHHHHHHHSSC----CCCC-CCBSCTTSTTHHHHHTT-CS-EEE
T ss_pred CCcchHHHHHHH-------hCCCEEEEECCCccCCcchhhhhhcccc----CCCC-eeEEecccccCHHHHhc-CC-EEE
Confidence 987666655543 24678888876653 35567887721 1111 23444544 222332 22 344
Q ss_pred CCCCCccHHHHHHHHHHHHhcCCe
Q psy316 207 DVHLDKESEHLNMAIKIMEQGGIV 230 (341)
Q Consensus 207 ~~~~~~~~~~~~~v~~ll~~lG~~ 230 (341)
++.|.. ....-.+.+|.+..+..
T Consensus 155 nPgC~t-t~~~lal~PL~~~~~i~ 177 (352)
T 2nqt_A 155 VPGCYP-TAALLALFPALAADLIE 177 (352)
T ss_dssp CCCHHH-HHHHHHHHHHHHTTCSC
T ss_pred cCCHHH-HHHHHHHHHHHHcCCCc
Confidence 555544 12344567787776653
No 325
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.56 E-value=0.004 Score=55.33 Aligned_cols=77 Identities=14% Similarity=0.212 Sum_probs=55.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChh-hhhhcCcCCCc-c-c-cChHHHhhcCCEEEEeeChHHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSER-FKLHWPEPMDF-A-L-NDNHRIIKEAEYVFLAMKPQYLDS 139 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e-~~~~l~~~~g~-~-~-~s~~e~~~~aDvIilaV~~~~v~~ 139 (341)
.++|.|||+|.+|..-++.|+++|. +|++++++.. .++.+.++.++ . . .-..+.+..+|+||.|+....+..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA----~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~N~ 106 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGA----AITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQAVNK 106 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCC----CEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHHHHH
Confidence 4789999999999999999999994 8999987542 34555443333 1 1 112345778999999998777666
Q ss_pred HHHHh
Q psy316 140 AIQGL 144 (341)
Q Consensus 140 vl~~i 144 (341)
.+...
T Consensus 107 ~I~~~ 111 (223)
T 3dfz_A 107 FVKQH 111 (223)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 326
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.55 E-value=0.0027 Score=55.86 Aligned_cols=67 Identities=21% Similarity=0.205 Sum_probs=50.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC-C-Cc----cccChHHHhhcCCEEEEeeC
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP-M-DF----ALNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~-~-g~----~~~s~~e~~~~aDvIilaV~ 133 (341)
+.|+|.|.|+ |.+|..+++.|++.|+ +|++.+|++++++.+... . .. ...+..+.+..+|+||.+..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~----~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag 93 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGH----EPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAG 93 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCC----eEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCC
Confidence 4578999997 9999999999999994 999999998887665431 1 11 11445566778999998864
No 327
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.55 E-value=0.00083 Score=61.82 Aligned_cols=41 Identities=24% Similarity=0.236 Sum_probs=36.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCc
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPE 109 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~ 109 (341)
.+++.|+|+|.+|.+++..|.+.| +|++++|++++++.+.+
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-----~V~v~~r~~~~~~~l~~ 168 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-----NIIIANRTVEKAEALAK 168 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-----EEEEECSSHHHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-----CEEEEECCHHHHHHHHH
Confidence 468999999999999999998876 89999999988877654
No 328
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.53 E-value=0.0097 Score=58.08 Aligned_cols=94 Identities=14% Similarity=0.202 Sum_probs=63.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEc----CC----hh-h---hhhcCcCC----Cc--cccChHHHhhcCC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASA----PS----ER-F---KLHWPEPM----DF--ALNDNHRIIKEAE 126 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~----r~----~e-~---~~~l~~~~----g~--~~~s~~e~~~~aD 126 (341)
.||.|+|+|..|.+++..|.+.|. +..+|+++| |+ .. . +..+++++ +. ...+..++++.+|
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~-~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~aD 265 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGV-KPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDAD 265 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTTCS
T ss_pred CEEEEECccHHHHHHHHHHHHcCC-CcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHhccCC
Confidence 589999999999999999999983 225899999 87 22 2 22221111 11 1345678889999
Q ss_pred EEEEeeCh--HHHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 127 YVFLAMKP--QYLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 127 vIilaV~~--~~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
+||=+++. ..+.+ +. ...+ .++.+|+++.+...
T Consensus 266 VlInaT~~~~G~~~~---e~-v~~m--~~~~iVfDLynP~~ 300 (439)
T 2dvm_A 266 VLISFTRPGPGVIKP---QW-IEKM--NEDAIVFPLANPVP 300 (439)
T ss_dssp EEEECSCCCSSSSCH---HH-HTTS--CTTCEEEECCSSSC
T ss_pred EEEEcCCCccCCCCh---HH-HHhc--CCCCEEEECCCCCC
Confidence 99999986 43322 12 2234 56779999866553
No 329
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.46 E-value=0.0039 Score=58.30 Aligned_cols=66 Identities=9% Similarity=0.024 Sum_probs=50.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cc---cChH---HH-hhcCCEEEEeeCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--AL---NDNH---RI-IKEAEYVFLAMKP 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~---~s~~---e~-~~~aDvIilaV~~ 134 (341)
.++|.|+|+|..|..+++.|.+.| + |.+.++++++.+ +.+ .+. .. .+.+ ++ ++++|.+++++++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g----~-v~vid~~~~~~~-~~~-~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~ 187 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSE----V-FVLAEDENVRKK-VLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLES 187 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSC----E-EEEESCGGGHHH-HHH-TTCEEEESCTTSHHHHHHTCSTTEEEEEECCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC----c-EEEEeCChhhhh-HHh-CCcEEEEeCCCCHHHHHhcChhhccEEEEcCCc
Confidence 357999999999999999998877 6 899999999988 655 354 22 2222 22 5689999999986
Q ss_pred HH
Q psy316 135 QY 136 (341)
Q Consensus 135 ~~ 136 (341)
+.
T Consensus 188 d~ 189 (336)
T 1lnq_A 188 DS 189 (336)
T ss_dssp HH
T ss_pred cH
Confidence 53
No 330
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.46 E-value=0.0014 Score=59.99 Aligned_cols=68 Identities=21% Similarity=0.178 Sum_probs=52.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC----c-cccChHHHhhcCCEEEEeeCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD----F-ALNDNHRIIKEAEYVFLAMKP 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g----~-~~~s~~e~~~~aDvIilaV~~ 134 (341)
.+++.|+|+|-.+.+++..|.+.|. .+|++++|+.++++.+.+.++ . ......+.+.++|+||=|+|.
T Consensus 125 ~~~~lilGaGGaarai~~aL~~~g~---~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~ 197 (269)
T 3tum_A 125 GKRALVIGCGGVGSAIAYALAEAGI---ASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPV 197 (269)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---SEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSST
T ss_pred cCeEEEEecHHHHHHHHHHHHHhCC---CeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcc
Confidence 4689999999999999999999984 689999999999888765432 1 112222335678888888873
No 331
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.46 E-value=0.0023 Score=61.51 Aligned_cols=91 Identities=10% Similarity=0.087 Sum_probs=65.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCCh-------hhhhhcCcCCCc------cccChHHHhhcCCEEEEe
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSE-------RFKLHWPEPMDF------ALNDNHRIIKEAEYVFLA 131 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~-------e~~~~l~~~~g~------~~~s~~e~~~~aDvIila 131 (341)
.||.|+|+|.-|.++++.+...|. .+|+++|++- +++..+++.+.- ...++.|+++.+|++|=+
T Consensus 189 ~kVVi~GAGaAG~~iA~ll~~~Ga---~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~ 265 (398)
T 2a9f_A 189 VSIVVNGGGSAGLSITRKLLAAGA---TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGV 265 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC---CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHHcCC---CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEec
Confidence 589999999999999999999994 5999999863 224444332211 234678999999998755
Q ss_pred eChH-HHHHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 132 MKPQ-YLDSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 132 V~~~-~v~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
..|. .-+++++.+ .++.+|+.+++..+
T Consensus 266 Sapgl~T~EmVk~M-------a~~pIIfalsNPt~ 293 (398)
T 2a9f_A 266 SAPGVLKAEWISKM-------AARPVIFAMANPIP 293 (398)
T ss_dssp CSTTCCCHHHHHTS-------CSSCEEEECCSSSC
T ss_pred CCCCCCCHHHHHhh-------CCCCEEEECCCCCc
Confidence 4454 345666666 57889999998764
No 332
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.44 E-value=0.0041 Score=59.24 Aligned_cols=70 Identities=14% Similarity=0.179 Sum_probs=44.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeE-EEEcCChhhhhhcCcCC-Cc-cccChHHHhhcC---------------
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQI-IASAPSERFKLHWPEPM-DF-ALNDNHRIIKEA--------------- 125 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V-~v~~r~~e~~~~l~~~~-g~-~~~s~~e~~~~a--------------- 125 (341)
++||||||+|.||+.+++.|.+...-...+| .++++++. .+.+++ |+ .+.+..+++.+.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~---~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~ 80 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERS---LISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLK 80 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBE---EECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHT
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChh---hhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhh
Confidence 4689999999999999999987530001244 46776432 344434 55 334555544432
Q ss_pred -----CEEEEeeChHH
Q psy316 126 -----EYVFLAMKPQY 136 (341)
Q Consensus 126 -----DvIilaV~~~~ 136 (341)
|+|+.|++...
T Consensus 81 ~~~~~DvVV~~t~~~~ 96 (358)
T 1ebf_A 81 TSPKPVILVDNTSSAY 96 (358)
T ss_dssp TCSSCEEEEECSCCHH
T ss_pred hccCCcEEEEcCCChH
Confidence 78999998653
No 333
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.29 E-value=0.0019 Score=60.74 Aligned_cols=91 Identities=9% Similarity=0.024 Sum_probs=52.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhc-----CCCCCCe-EEEEcCChhhhh------hc---CcCCC-c-c-ccChHHHhh--c
Q psy316 65 TKVGFIGAGNMAQAVATSLIRT-----GLCIPAQ-IIASAPSERFKL------HW---PEPMD-F-A-LNDNHRIIK--E 124 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~-----G~~~~~~-V~v~~r~~e~~~------~l---~~~~g-~-~-~~s~~e~~~--~ 124 (341)
.||+|||+|+||+.+++.|.+. |. .-+ +.+++|+++... .+ .++.| + . ..+..+++. +
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~--~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l~~~~ 82 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAF--SIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGEA 82 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--C--EEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGGTTSC
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCC--CEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHhcCCC
Confidence 6899999999999999999874 21 123 347888754321 11 11112 1 1 115566664 5
Q ss_pred CCEEEEeeChHH-HHHHHHHhhhcccccCCCcEEEEe
Q psy316 125 AEYVFLAMKPQY-LDSAIQGLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 125 aDvIilaV~~~~-v~~vl~~i~~~~l~~~~~~iIVs~ 160 (341)
.|+|+.|+|+.. .....+.. ...+ ..++-||+.
T Consensus 83 iDvVVe~T~~~~~~~pa~~~~-~~aL--~aGkhVVta 116 (325)
T 3ing_A 83 ADLLVDCTPASRDGVREYSLY-RMAF--ESGMNVVTA 116 (325)
T ss_dssp CSEEEECCCCCSSSHHHHHHH-HHHH--HTTCEEEEC
T ss_pred CCEEEECCCCccccchHHHHH-HHHH--HCCCeEEEc
Confidence 899999998752 22222222 3334 456666654
No 334
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.28 E-value=0.0062 Score=55.69 Aligned_cols=73 Identities=10% Similarity=0.195 Sum_probs=55.5
Q ss_pred CCCCeEEEEcccH-HHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHH
Q psy316 62 PMWTKVGFIGAGN-MAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 62 ~m~~kIgiIG~G~-mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~v 140 (341)
.-.+++.|||.|+ +|..++..|...|. +|++++++. .+..+.+++||+||.+++...+
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gA----tVtv~~~~t--------------~~L~~~~~~ADIVI~Avg~p~~--- 206 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNY----TVSVCHSKT--------------KDIGSMTRSSKIVVVAVGRPGF--- 206 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTC----EEEEECTTC--------------SCHHHHHHHSSEEEECSSCTTC---
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCC----eEEEEeCCc--------------ccHHHhhccCCEEEECCCCCcc---
Confidence 3457899999986 89999999999985 899998631 2567889999999999974221
Q ss_pred HHHhhhcccccCCCcEEEEe
Q psy316 141 IQGLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~ 160 (341)
+. ...+ +++.+||++
T Consensus 207 I~---~~~v--k~GavVIDv 221 (276)
T 3ngx_A 207 LN---REMV--TPGSVVIDV 221 (276)
T ss_dssp BC---GGGC--CTTCEEEEC
T ss_pred cc---Hhhc--cCCcEEEEe
Confidence 11 2346 778888876
No 335
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.27 E-value=0.013 Score=52.91 Aligned_cols=35 Identities=20% Similarity=0.352 Sum_probs=31.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSE 101 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~ 101 (341)
..+|.|||+|.+|+.++++|...|. .+++++|++.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gv---g~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGV---GTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC---SEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCC---CeEEEEeCCC
Confidence 4689999999999999999999996 6899998764
No 336
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=96.24 E-value=0.0099 Score=56.25 Aligned_cols=99 Identities=12% Similarity=0.115 Sum_probs=62.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC---CCeEEEEcCChh--hhh----hcCc-CC----Cc-cccChHHHhhcCCEE
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCI---PAQIIASAPSER--FKL----HWPE-PM----DF-ALNDNHRIIKEAEYV 128 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~---~~~V~v~~r~~e--~~~----~l~~-~~----g~-~~~s~~e~~~~aDvI 128 (341)
.||+|||+ |++|++++..|....++. +.++.++|.++. +++ .|.. .+ .+ ...+..+.+++||+|
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~advV 104 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVAIA 104 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCCCEE
Confidence 49999996 999999999887765433 237899998653 222 1211 01 12 445677889999999
Q ss_pred EEee----ChH------------HHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 129 FLAM----KPQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 129 ilaV----~~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
|++- +|. .++++.+.+ ..+- .++.+|+-+.+.+..
T Consensus 105 vi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i-~~~a--~~~~~vlvvsNPvd~ 155 (345)
T 4h7p_A 105 IMCGAFPRKAGMERKDLLEMNARIFKEQGEAI-AAVA--ASDCRVVVVGNPANT 155 (345)
T ss_dssp EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHH-HHHS--CTTCEEEECSSSHHH
T ss_pred EECCCCCCCCCCCHHHHHHHhHHHHHHHHHHH-Hhhc--cCceEEEEeCCCcch
Confidence 9974 231 133344444 4443 466666666676553
No 337
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=96.22 E-value=0.015 Score=55.42 Aligned_cols=91 Identities=13% Similarity=0.165 Sum_probs=54.1
Q ss_pred CeEEEEc-ccHHHHHHHHHHHh-cCCCCCCeEEEEc-CChhh-hhhcCc-CCCc-cccChHHHhhcCCEEEEeeChHHHH
Q psy316 65 TKVGFIG-AGNMAQAVATSLIR-TGLCIPAQIIASA-PSERF-KLHWPE-PMDF-ALNDNHRIIKEAEYVFLAMKPQYLD 138 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~-~G~~~~~~V~v~~-r~~e~-~~~l~~-~~g~-~~~s~~e~~~~aDvIilaV~~~~v~ 138 (341)
+||+|+| .|.+|..+.+.++. +++ +...++... ++..+ ...+.. +.-+ ...+..+ ++.+|+||+|++...-.
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~-~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~-~~~~DvVf~a~g~~~s~ 79 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDF-DAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA-LKALDIIVTCQGGDYTN 79 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGG-GGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH-HHTCSEEEECSCHHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCC-CeEEEEEEEeCCCCCCccccCCCceEEEecCChHH-hcCCCEEEECCCchhHH
Confidence 6899999 89999999995554 332 223454443 33211 111111 1111 1223333 57899999999988777
Q ss_pred HHHHHhhhcccccCCC--cEEEEecCC
Q psy316 139 SAIQGLVNDKVTLNSS--RCIISMLVG 163 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~--~iIVs~~ag 163 (341)
+....+ . ..| .+||+..+.
T Consensus 80 ~~a~~~-~-----~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 80 EIYPKL-R-----ESGWQGYWIDAASS 100 (367)
T ss_dssp HHHHHH-H-----HTTCCCEEEECSST
T ss_pred HHHHHH-H-----HCCCCEEEEcCChh
Confidence 777665 3 234 388987653
No 338
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.19 E-value=0.023 Score=51.22 Aligned_cols=64 Identities=9% Similarity=0.009 Sum_probs=49.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc-CCCCCCeEEEEcCChhhhhhcCcCCCc--c---ccC---hHHHhhcCCEEEEeeC
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRT-GLCIPAQIIASAPSERFKLHWPEPMDF--A---LND---NHRIIKEAEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~-G~~~~~~V~v~~r~~e~~~~l~~~~g~--~---~~s---~~e~~~~aDvIilaV~ 133 (341)
|||.|.|+ |.+|+.+++.|.+. | ++|++..|++++...+.. .++ . ..+ ..++++.+|+||.+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g----~~V~~~~R~~~~~~~~~~-~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 74 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI----DHFHIGVRNVEKVPDDWR-GKVSVRQLDYFNQESMVEAFKGMDTVVFIPS 74 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC----TTEEEEESSGGGSCGGGB-TTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC----CcEEEEECCHHHHHHhhh-CCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 57999985 99999999999887 6 489999999988776654 243 1 122 3456778999998864
No 339
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.14 E-value=0.0067 Score=56.73 Aligned_cols=66 Identities=12% Similarity=0.189 Sum_probs=48.4
Q ss_pred CeEEEEcccHHHHH-HHHHHHhcCCCCCCeEEEEcCCh--hhhhhcCcCCCc-cc--cChHHHh-hcCCEEEEe--eChH
Q psy316 65 TKVGFIGAGNMAQA-VATSLIRTGLCIPAQIIASAPSE--RFKLHWPEPMDF-AL--NDNHRII-KEAEYVFLA--MKPQ 135 (341)
Q Consensus 65 ~kIgiIG~G~mG~a-ia~~L~~~G~~~~~~V~v~~r~~--e~~~~l~~~~g~-~~--~s~~e~~-~~aDvIila--V~~~ 135 (341)
+||.|||.|.+|.+ +|+.|.+.|+ +|+++|+++ ...+.|.+ .|+ .. .+..++. .++|+||++ +|++
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~----~V~~~D~~~~~~~~~~L~~-~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~ 79 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGF----EVSGCDAKMYPPMSTQLEA-LGIDVYEGFDAAQLDEFKADVYVIGNVAKRG 79 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTC----EEEEEESSCCTTHHHHHHH-TTCEEEESCCGGGGGSCCCSEEEECTTCCTT
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCC----EEEEEcCCCCcHHHHHHHh-CCCEEECCCCHHHcCCCCCCEEEECCCcCCC
Confidence 68999999999995 9999999995 999999864 24455665 476 32 3344444 479999986 5653
No 340
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.07 E-value=0.0068 Score=56.14 Aligned_cols=71 Identities=13% Similarity=0.261 Sum_probs=54.5
Q ss_pred CCeEEEEcccH-HHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChH--HHhhcCCEEEEeeChHHHHHH
Q psy316 64 WTKVGFIGAGN-MAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNH--RIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~-mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~--e~~~~aDvIilaV~~~~v~~v 140 (341)
.+++.|||.|+ +|..++..|.+.|. +|++++|... ++. +.+++||+||.+++...+
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~~~~T~--------------~l~l~~~~~~ADIVI~Avg~p~~--- 223 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKENA----TVTIVHSGTS--------------TEDMIDYLRTADIVIAAMGQPGY--- 223 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTC----EEEEECTTSC--------------HHHHHHHHHTCSEEEECSCCTTC---
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC----eEEEEeCCCC--------------CchhhhhhccCCEEEECCCCCCC---
Confidence 47899999987 79999999999985 8999987322 234 778999999999974321
Q ss_pred HHHhhhcccccCCCcEEEEe
Q psy316 141 IQGLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~ 160 (341)
+. ...+ +++.+||++
T Consensus 224 I~---~~~v--k~GavVIDv 238 (300)
T 4a26_A 224 VK---GEWI--KEGAAVVDV 238 (300)
T ss_dssp BC---GGGS--CTTCEEEEC
T ss_pred Cc---HHhc--CCCcEEEEE
Confidence 21 3346 788899987
No 341
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.07 E-value=0.0068 Score=55.59 Aligned_cols=71 Identities=21% Similarity=0.282 Sum_probs=54.1
Q ss_pred CCeEEEEcccHH-HHHHHHHHHhc--CCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHH
Q psy316 64 WTKVGFIGAGNM-AQAVATSLIRT--GLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~m-G~aia~~L~~~--G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~v 140 (341)
.+++.|||.|++ |..++..|... | .+|++++|+. .+..+.++++|+||.++....+
T Consensus 158 gk~vvVvG~s~iVG~p~A~lL~~~g~~----atVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~p~~--- 216 (281)
T 2c2x_A 158 GAHVVVIGRGVTVGRPLGLLLTRRSEN----ATVTLCHTGT--------------RDLPALTRQADIVVAAVGVAHL--- 216 (281)
T ss_dssp TCEEEEECCCTTTHHHHHHHHTSTTTC----CEEEEECTTC--------------SCHHHHHTTCSEEEECSCCTTC---
T ss_pred CCEEEEECCCcHHHHHHHHHHhcCCCC----CEEEEEECch--------------hHHHHHHhhCCEEEECCCCCcc---
Confidence 478999999986 99999999887 5 4899997653 2567788999999999974332
Q ss_pred HHHhhhcccccCCCcEEEEe
Q psy316 141 IQGLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~ 160 (341)
+. ...+ +++.+||++
T Consensus 217 I~---~~~v--k~GavVIDV 231 (281)
T 2c2x_A 217 LT---ADMV--RPGAAVIDV 231 (281)
T ss_dssp BC---GGGS--CTTCEEEEC
T ss_pred cC---HHHc--CCCcEEEEc
Confidence 21 2346 778888876
No 342
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.05 E-value=0.0056 Score=53.09 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=47.2
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc---cccC----hHHHhhcCCEEEEeeC
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF---ALND----NHRIIKEAEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~---~~~s----~~e~~~~aDvIilaV~ 133 (341)
|||.|+| +|.+|..+++.|++.|+ +|++.+|++++.+.+.. ... -..+ ..++++.+|+||.+..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~~~~-~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag 72 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDY----QIYAGARKVEQVPQYNN-VKAVHFDVDWTPEEMAKQLHGMDAIINVSG 72 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSC----EEEEEESSGGGSCCCTT-EEEEECCTTSCHHHHHTTTTTCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCccchhhcCC-ceEEEecccCCHHHHHHHHcCCCEEEECCc
Confidence 5899998 69999999999999984 99999999887655411 111 1223 2344668999998874
No 343
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.02 E-value=0.021 Score=57.33 Aligned_cols=98 Identities=14% Similarity=0.027 Sum_probs=62.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccC---hHH-HhhcCCEEEEeeChHHHHHH
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALND---NHR-IIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s---~~e-~~~~aDvIilaV~~~~v~~v 140 (341)
++|.|||+|++|..+++.|.+.|+ +|.+.++++++.+.+..-.-.-.++ +.+ -++++|.++.++..+...-+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~----~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ni~ 424 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV----PFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNIF 424 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC----CEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC----CEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCchHHHH
Confidence 689999999999999999999984 9999999998877664100001112 122 25689999999987643222
Q ss_pred HHHhhhcccccCCC-cEEEEecCCCCHHHH
Q psy316 141 IQGLVNDKVTLNSS-RCIISMLVGVDLETL 169 (341)
Q Consensus 141 l~~i~~~~l~~~~~-~iIVs~~agi~~~~l 169 (341)
+-.+ ...+ +++ ++|.-....-..+.+
T Consensus 425 ~~~~-ak~l--~~~~~iiar~~~~~~~~~l 451 (565)
T 4gx0_A 425 LTLA-CRHL--HSHIRIVARANGEENVDQL 451 (565)
T ss_dssp HHHH-HHHH--CSSSEEEEEESSTTSHHHH
T ss_pred HHHH-HHHH--CCCCEEEEEECCHHHHHHH
Confidence 2222 3334 555 454444333333433
No 344
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.00 E-value=0.011 Score=54.41 Aligned_cols=71 Identities=17% Similarity=0.242 Sum_probs=54.4
Q ss_pred CCeEEEEcccH-HHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 64 WTKVGFIGAGN-MAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 64 ~~kIgiIG~G~-mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
.+++.|||.|+ +|..++..|...|. +|++++|+. .+..+.++++|+||.+++...+ +.
T Consensus 161 Gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~p~~---I~ 219 (285)
T 3l07_A 161 GAYAVVVGASNVVGKPVSQLLLNAKA----TVTTCHRFT--------------TDLKSHTTKADILIVAVGKPNF---IT 219 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTC----EEEEECTTC--------------SSHHHHHTTCSEEEECCCCTTC---BC
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCC----eEEEEeCCc--------------hhHHHhcccCCEEEECCCCCCC---CC
Confidence 47899999988 69999999999985 899998641 2567788999999999974221 11
Q ss_pred HhhhcccccCCCcEEEEe
Q psy316 143 GLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~ 160 (341)
...+ +++.+||++
T Consensus 220 ---~~~v--k~GavVIDv 232 (285)
T 3l07_A 220 ---ADMV--KEGAVVIDV 232 (285)
T ss_dssp ---GGGS--CTTCEEEEC
T ss_pred ---HHHc--CCCcEEEEe
Confidence 3346 788888876
No 345
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=96.00 E-value=0.0057 Score=57.13 Aligned_cols=70 Identities=17% Similarity=0.270 Sum_probs=47.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCC---CCCeEEEEcCCh--hhhh----hcCc---CC--Cc-cccChHHHhhcCC
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLC---IPAQIIASAPSE--RFKL----HWPE---PM--DF-ALNDNHRIIKEAE 126 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~---~~~~V~v~~r~~--e~~~----~l~~---~~--g~-~~~s~~e~~~~aD 126 (341)
++|||.|+|+ |.+|+.++..|++.|++ ..++|.++|+++ ++.+ .+.. .+ .+ ...+..++++++|
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDAD 82 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCC
Confidence 4579999997 99999999999988742 224899999864 2221 2211 01 12 2245577788999
Q ss_pred EEEEee
Q psy316 127 YVFLAM 132 (341)
Q Consensus 127 vIilaV 132 (341)
+||.+-
T Consensus 83 ~Vih~A 88 (327)
T 1y7t_A 83 YALLVG 88 (327)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999874
No 346
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.99 E-value=0.021 Score=54.05 Aligned_cols=101 Identities=17% Similarity=0.132 Sum_probs=64.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEc-CC-hh-hhhh----cCcCCCccccChHHHhhcCCEEEEeeCh
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASA-PS-ER-FKLH----WPEPMDFALNDNHRIIKEAEYVFLAMKP 134 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~-r~-~e-~~~~----l~~~~g~~~~s~~e~~~~aDvIilaV~~ 134 (341)
-+.||+|||+ |..|.-|.+.|.++- ..+|.... ++ .. +... +..++-+...+..+...++|++|+|+|.
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP---~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~ 88 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHP---EAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPA 88 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCT---TEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCST
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCC---CcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCc
Confidence 3468999976 999999999998763 24565443 22 11 1111 2222222222445555789999999999
Q ss_pred HHHHHHHHHhhhcccccCCCcEEEEecCCC--C-HHHHHHhcc
Q psy316 135 QYLDSAIQGLVNDKVTLNSSRCIISMLVGV--D-LETLKKKLS 174 (341)
Q Consensus 135 ~~v~~vl~~i~~~~l~~~~~~iIVs~~agi--~-~~~l~~~l~ 174 (341)
..-.++...+ .+..||+.++.. . .+..++|.+
T Consensus 89 ~~s~~~~~~~--------~g~~VIDlSsdfRl~~~~~y~~~y~ 123 (351)
T 1vkn_A 89 GASYDLVREL--------KGVKIIDLGADFRFDDPGVYREWYG 123 (351)
T ss_dssp THHHHHHTTC--------CSCEEEESSSTTTCSSHHHHHHHHC
T ss_pred HHHHHHHHHh--------CCCEEEECChhhhCCchhhhhhhcC
Confidence 8776665433 467899987654 2 355677766
No 347
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.99 E-value=0.035 Score=49.59 Aligned_cols=83 Identities=13% Similarity=0.107 Sum_probs=54.7
Q ss_pred CeEEEEcc-c-HHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHH
Q psy316 65 TKVGFIGA-G-NMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDS 139 (341)
Q Consensus 65 ~kIgiIG~-G-~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~ 139 (341)
+++.|.|+ | .+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ....++.++.+ .+..+..
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~l-------~~-~~~~~~~~~~~Dl~~~~~v~~ 90 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGA----DVVISDYHERRLGETRDQL-------AD-LGLGRVEAVVCDVTSTEAVDA 90 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HT-TCSSCEEEEECCTTCHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCC----EEEEecCCHHHHHHHHHHH-------Hh-cCCCceEEEEeCCCCHHHHHH
Confidence 45667788 8 599999999999994 8999999988776554321 00 11234555544 3567777
Q ss_pred HHHHhhhcccccCCCcEEEEecC
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++++ ...+ .+=.++|+.++
T Consensus 91 ~~~~~-~~~~--g~id~li~~Ag 110 (266)
T 3o38_A 91 LITQT-VEKA--GRLDVLVNNAG 110 (266)
T ss_dssp HHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHH-HHHh--CCCcEEEECCC
Confidence 77776 5444 33357787644
No 348
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.94 E-value=0.012 Score=54.49 Aligned_cols=71 Identities=6% Similarity=0.157 Sum_probs=55.4
Q ss_pred CCeEEEEcccH-HHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 64 WTKVGFIGAGN-MAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 64 ~~kIgiIG~G~-mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
.+++.|||.|+ +|..++..|...|. +|++++++. .+..+.+++||+||.++....+ +.
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~p~~---I~ 223 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWNNA----TVTTCHSKT--------------AHLDEEVNKGDILVVATGQPEM---VK 223 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTC----EEEEECTTC--------------SSHHHHHTTCSEEEECCCCTTC---BC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC----eEEEEECCc--------------ccHHHHhccCCEEEECCCCccc---CC
Confidence 57899999997 69999999999884 899997541 2567888999999999975321 21
Q ss_pred HhhhcccccCCCcEEEEe
Q psy316 143 GLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~ 160 (341)
...+ +++.+||++
T Consensus 224 ---~~~v--k~GavVIDV 236 (301)
T 1a4i_A 224 ---GEWI--KPGAIVIDC 236 (301)
T ss_dssp ---GGGS--CTTCEEEEC
T ss_pred ---HHHc--CCCcEEEEc
Confidence 3346 788999987
No 349
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.94 E-value=0.0047 Score=58.82 Aligned_cols=92 Identities=11% Similarity=0.099 Sum_probs=56.4
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEE-EEcCCh--hhhhhc---------C---cCCCccccChHHHhhcCC
Q psy316 63 MWTKVGFIG-AGNMAQAVATSLIRTGLCIPAQII-ASAPSE--RFKLHW---------P---EPMDFALNDNHRIIKEAE 126 (341)
Q Consensus 63 m~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~-v~~r~~--e~~~~l---------~---~~~g~~~~s~~e~~~~aD 126 (341)
|++||+||| .|..|.-|.+.|.++ +..++. +..++. .+.... . .++.+...+. +.+.++|
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~h---P~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~-~~~~~vD 81 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNH---PYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDP-KLMDDVD 81 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTC---SSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCG-GGCTTCC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC---CCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCH-HHhcCCC
Confidence 357899999 599999999966554 223554 333322 122211 0 0111111122 3357899
Q ss_pred EEEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCC
Q psy316 127 YVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGV 164 (341)
Q Consensus 127 vIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi 164 (341)
+||+|+|...-.+....+ + ..+..+|++++..
T Consensus 82 vvf~a~p~~~s~~~a~~~----~--~~G~~vIDlSa~~ 113 (359)
T 4dpl_A 82 IIFSPLPQGAAGPVEEQF----A--KEGFPVISNSPDH 113 (359)
T ss_dssp EEEECCCTTTHHHHHHHH----H--HTTCEEEECSSTT
T ss_pred EEEECCChHHHHHHHHHH----H--HCCCEEEEcCCCc
Confidence 999999998877777665 3 4677889886653
No 350
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.94 E-value=0.0047 Score=58.82 Aligned_cols=92 Identities=11% Similarity=0.099 Sum_probs=56.3
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEE-EEcCCh--hhhhhc---------C---cCCCccccChHHHhhcCC
Q psy316 63 MWTKVGFIG-AGNMAQAVATSLIRTGLCIPAQII-ASAPSE--RFKLHW---------P---EPMDFALNDNHRIIKEAE 126 (341)
Q Consensus 63 m~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~-v~~r~~--e~~~~l---------~---~~~g~~~~s~~e~~~~aD 126 (341)
|++||+||| .|..|.-|.+.|.++ +..++. +..++. .+.... . .++.+...+. +.+.++|
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~h---P~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~-~~~~~vD 81 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNH---PYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDP-KLMDDVD 81 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTC---SSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCG-GGCTTCC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC---CCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCH-HHhcCCC
Confidence 357899999 599999999966554 223554 333322 122211 0 0111111122 3357899
Q ss_pred EEEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCC
Q psy316 127 YVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGV 164 (341)
Q Consensus 127 vIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi 164 (341)
+||+|+|...-.+....+ + ..+..+|++++..
T Consensus 82 vvf~a~p~~~s~~~a~~~----~--~~G~~vIDlSa~~ 113 (359)
T 4dpk_A 82 IIFSPLPQGAAGPVEEQF----A--KEGFPVISNSPDH 113 (359)
T ss_dssp EEEECCCTTTHHHHHHHH----H--HTTCEEEECSSTT
T ss_pred EEEECCChHHHHHHHHHH----H--HCCCEEEEcCCCc
Confidence 999999998877777665 3 4677888886653
No 351
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.90 E-value=0.011 Score=54.47 Aligned_cols=66 Identities=14% Similarity=0.190 Sum_probs=47.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--c---ccC---hHHHhhcCCEEEEeeC
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--A---LND---NHRIIKEAEYVFLAMK 133 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~---~~s---~~e~~~~aDvIilaV~ 133 (341)
++|+|.|.|+ |.+|+.+++.|++.|+ +|++.+|++.+.+.+.. .++ . ..+ ..++++.+|+||-+..
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGH----DLVLIHRPSSQIQRLAY-LEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEECTTSCGGGGGG-GCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEecChHhhhhhcc-CCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 3468999985 9999999999999984 99999998776655543 132 1 122 3455678999998753
No 352
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=95.89 E-value=0.0063 Score=57.35 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=47.7
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCC---CCeEEEEcCCh--hhhh----hcCc-CC----Cc-cccChHHHhhcCCE
Q psy316 64 WTKVGFIG-AGNMAQAVATSLIRTGLCI---PAQIIASAPSE--RFKL----HWPE-PM----DF-ALNDNHRIIKEAEY 127 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~aia~~L~~~G~~~---~~~V~v~~r~~--e~~~----~l~~-~~----g~-~~~s~~e~~~~aDv 127 (341)
++||+|+| +|.+|+.++..|...+.+. +..+.++|+++ ++++ .|.. .+ ++ ...+..+.+++||+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDv 82 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV 82 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCE
Confidence 46899999 7999999999999887532 22389999964 2222 2221 01 12 33456778999999
Q ss_pred EEEee
Q psy316 128 VFLAM 132 (341)
Q Consensus 128 IilaV 132 (341)
||++-
T Consensus 83 VvitA 87 (333)
T 5mdh_A 83 AILVG 87 (333)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99875
No 353
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.84 E-value=0.0099 Score=54.68 Aligned_cols=71 Identities=15% Similarity=0.252 Sum_probs=54.5
Q ss_pred CCeEEEEcccH-HHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 64 WTKVGFIGAGN-MAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 64 ~~kIgiIG~G~-mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
.+++.|||.|+ .|..++..|...|. +|++++++. .+..+.+++||+||.+++...+ +.
T Consensus 159 gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~p~l---I~ 217 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRPMSMELLLAGC----TTTVTHRFT--------------KNLRHHVENADLLIVAVGKPGF---IP 217 (288)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTC----EEEEECSSC--------------SCHHHHHHHCSEEEECSCCTTC---BC
T ss_pred CCEEEEECCChHHHHHHHHHHHHCCC----eEEEEeCCc--------------hhHHHHhccCCEEEECCCCcCc---CC
Confidence 47899999997 59999999999884 899997542 2567788999999999974331 21
Q ss_pred HhhhcccccCCCcEEEEe
Q psy316 143 GLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~ 160 (341)
...+ +++.+||++
T Consensus 218 ---~~~v--k~GavVIDV 230 (288)
T 1b0a_A 218 ---GDWI--KEGAIVIDV 230 (288)
T ss_dssp ---TTTS--CTTCEEEEC
T ss_pred ---HHHc--CCCcEEEEc
Confidence 2346 788888876
No 354
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=95.80 E-value=0.015 Score=55.85 Aligned_cols=92 Identities=15% Similarity=0.193 Sum_probs=56.2
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEE-EE-cC-Chhh-hhh---cC---------cCCCccccChHHHhhcCC
Q psy316 64 WTKVGFIG-AGNMAQAVATSLIRTGLCIPAQII-AS-AP-SERF-KLH---WP---------EPMDFALNDNHRIIKEAE 126 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~-v~-~r-~~e~-~~~---l~---------~~~g~~~~s~~e~~~~aD 126 (341)
++||+||| .|..|.-|.+.|.++- ..+|. ++ .+ +..+ ... +. .++-+...+..+.+.++|
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp---~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~~~~D 95 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHP---EFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFLECD 95 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCS---SEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTGGGCS
T ss_pred ccEEEEECCCChHHHHHHHHHHcCC---CceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhcccCC
Confidence 35899999 5999999999776643 23563 43 23 3221 111 11 111111112221467899
Q ss_pred EEEEeeChHHHHHHHHHhhhcccccCCCcEEEEecCCC
Q psy316 127 YVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLVGV 164 (341)
Q Consensus 127 vIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~agi 164 (341)
+||+|+|...-.++...+ + ..+..||++++..
T Consensus 96 vvf~alp~~~s~~~~~~~----~--~~G~~VIDlSa~f 127 (381)
T 3hsk_A 96 VVFSGLDADVAGDIEKSF----V--EAGLAVVSNAKNY 127 (381)
T ss_dssp EEEECCCHHHHHHHHHHH----H--HTTCEEEECCSTT
T ss_pred EEEECCChhHHHHHHHHH----H--hCCCEEEEcCCcc
Confidence 999999998888877665 3 4577889886653
No 355
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.79 E-value=0.014 Score=53.61 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=54.9
Q ss_pred CCeEEEEcccH-HHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 64 WTKVGFIGAGN-MAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 64 ~~kIgiIG~G~-mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
.+++.|||.|+ +|..++..|...|. +|++++|+. .++.+.+++||+||.+++...+ +.
T Consensus 160 Gk~vvVvGrs~iVG~p~A~lL~~~gA----tVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~p~~---I~ 218 (285)
T 3p2o_A 160 GKDAVIIGASNIVGRPMATMLLNAGA----TVSVCHIKT--------------KDLSLYTRQADLIIVAAGCVNL---LR 218 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTC----EEEEECTTC--------------SCHHHHHTTCSEEEECSSCTTC---BC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC----eEEEEeCCc--------------hhHHHHhhcCCEEEECCCCCCc---CC
Confidence 47899999988 69999999999985 899998642 2567788999999999974221 11
Q ss_pred HhhhcccccCCCcEEEEe
Q psy316 143 GLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~ 160 (341)
...+ +++.+||++
T Consensus 219 ---~~~v--k~GavVIDV 231 (285)
T 3p2o_A 219 ---SDMV--KEGVIVVDV 231 (285)
T ss_dssp ---GGGS--CTTEEEEEC
T ss_pred ---HHHc--CCCeEEEEe
Confidence 3346 788888876
No 356
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=95.77 E-value=0.0068 Score=59.62 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=33.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhh
Q psy316 61 VPMWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERF 103 (341)
Q Consensus 61 ~~m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~ 103 (341)
+..++||.|||+|.||+.++..|.++.-+...+|++.+++...
T Consensus 10 ~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~ 52 (480)
T 2ph5_A 10 ILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK 52 (480)
T ss_dssp BCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS
T ss_pred ecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhh
Confidence 3466899999999999999999988753333478888876543
No 357
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.72 E-value=0.032 Score=52.62 Aligned_cols=35 Identities=31% Similarity=0.368 Sum_probs=31.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSE 101 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~ 101 (341)
..||.|||+|.+|+.+++.|..+|. .+|+++|++.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGV---g~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGV---RKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---CEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---CEEEEecCCE
Confidence 4689999999999999999999996 6899998754
No 358
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.71 E-value=0.01 Score=56.03 Aligned_cols=93 Identities=11% Similarity=0.071 Sum_probs=52.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHh---cCCCCCCeEE-EEcC-ChhhhhhcCc---CC-----------------C--c-c
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIR---TGLCIPAQII-ASAP-SERFKLHWPE---PM-----------------D--F-A 114 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~---~G~~~~~~V~-v~~r-~~e~~~~l~~---~~-----------------g--~-~ 114 (341)
|++||||+|+|.+|..+.+.|.+ +. .-+|. +.++ +++.+..+.+ -+ | + .
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~~---~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v 77 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRRA---EITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRV 77 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGGG---TEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCCC---CEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEE
Confidence 45799999999999999999987 42 12554 4444 3332222110 00 1 1 1
Q ss_pred --ccChHHH-hh--cCCEEEEeeChHHHHHHHHHhhhcccccCCCcEEEEecC
Q psy316 115 --LNDNHRI-IK--EAEYVFLAMKPQYLDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 115 --~~s~~e~-~~--~aDvIilaV~~~~v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
..++.++ .. .+|+||.|++...-.+..... ... ...++|||..+
T Consensus 78 ~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~-l~~---GakkVVId~~a 126 (339)
T 2x5j_O 78 LHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAH-IAA---GAKKVLFSHPG 126 (339)
T ss_dssp ECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHH-HHT---TCSEEEESSCC
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHH-HHc---CCCEEEEeccc
Confidence 1234443 22 799999999876555555443 211 23347887643
No 359
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.71 E-value=0.01 Score=53.61 Aligned_cols=62 Identities=15% Similarity=0.193 Sum_probs=44.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc------cccChHHHhhc-CCEEEEeeC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF------ALNDNHRIIKE-AEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~------~~~s~~e~~~~-aDvIilaV~ 133 (341)
|||.|.|+|.+|+.+++.|++.|+ +|++.+|++++.. ..... ...+..++++. +|+||-+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGH----EVTGLRRSAQPMP---AGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC----CEEEEECTTSCCC---TTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCC----EEEEEeCCccccc---cCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 689999999999999999999984 9999999866532 11111 11222344555 999997763
No 360
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.70 E-value=0.018 Score=52.55 Aligned_cols=64 Identities=20% Similarity=0.203 Sum_probs=44.0
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCcc---c--cChHHHhhcCCEEEEee
Q psy316 63 MWTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFA---L--NDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 63 m~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~---~--~s~~e~~~~aDvIilaV 132 (341)
|+|+|.|.| +|.+|+.+++.|++.|+ +|++.+|++...+ +.. .... . .+..++++.+|+||-+.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~-~~~-~~~~~~Dl~~~~~~~~~~~~d~Vih~a 70 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGN----TPIILTRSIGNKA-IND-YEYRVSDYTLEDLINQLNDVDAVVHLA 70 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCCC------C-CEEEECCCCHHHHHHHTTTCSEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCC----EEEEEeCCCCccc-CCc-eEEEEccccHHHHHHhhcCCCEEEEcc
Confidence 678999998 59999999999999984 9999999854443 321 2111 1 12344567899999875
No 361
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=95.70 E-value=0.022 Score=54.42 Aligned_cols=100 Identities=10% Similarity=0.107 Sum_probs=60.1
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCC-CeEEE--EcCC--hhhhh----hcCcC---C--Cc-cccChHHHhhcCCE
Q psy316 64 WTKVGFIG-AGNMAQAVATSLIRTGLCIP-AQIIA--SAPS--ERFKL----HWPEP---M--DF-ALNDNHRIIKEAEY 127 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~aia~~L~~~G~~~~-~~V~v--~~r~--~e~~~----~l~~~---~--g~-~~~s~~e~~~~aDv 127 (341)
.+||+||| +|.+|.+++..|...+.+.. ..|.+ ++.. +++++ .|..- + ++ ...+..+.+++||+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daDv 111 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW 111 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCCE
Confidence 46899999 79999999999999886543 12555 4432 22222 12210 1 22 34456788999999
Q ss_pred EEEee--C--hH------------HHHHHHHHhhhcccccCCCcEEEEecCCCCH
Q psy316 128 VFLAM--K--PQ------------YLDSAIQGLVNDKVTLNSSRCIISMLVGVDL 166 (341)
Q Consensus 128 IilaV--~--~~------------~v~~vl~~i~~~~l~~~~~~iIVs~~agi~~ 166 (341)
||++- | |. .++++...+ ..+. .++.+|+-+++.++.
T Consensus 112 VVitag~prkpG~tR~DLl~~N~~I~k~i~~~i-~~~a--~p~~ivlVvsNPvD~ 163 (375)
T 7mdh_A 112 ALLIGAKPRGPGMERAALLDINGQIFADQGKAL-NAVA--SKNVKVLVVGNPCNT 163 (375)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHH-HHHS--CTTCEEEECSSSHHH
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHhc--CCCeEEEEecCchhH
Confidence 99974 2 21 123333344 4443 466677767676553
No 362
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.64 E-value=0.019 Score=53.87 Aligned_cols=65 Identities=9% Similarity=0.122 Sum_probs=47.9
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhc-CCCCCCeEEEEcCChhhhhhcCcCCCc--c---cc-C---hHHHhhcCCEEEEee
Q psy316 64 WTKVGFIG-AGNMAQAVATSLIRT-GLCIPAQIIASAPSERFKLHWPEPMDF--A---LN-D---NHRIIKEAEYVFLAM 132 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~aia~~L~~~-G~~~~~~V~v~~r~~e~~~~l~~~~g~--~---~~-s---~~e~~~~aDvIilaV 132 (341)
+|+|.|.| +|-+|+.+++.|++. | ++|++.+|++++...+....++ . .. + ..++++.+|+||-+.
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g----~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A 99 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTD----WEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLV 99 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSS----CEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECB
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC----CEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcC
Confidence 47899998 599999999999998 7 4999999988777665442233 1 12 2 234567899999753
No 363
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=95.63 E-value=0.019 Score=53.43 Aligned_cols=66 Identities=24% Similarity=0.241 Sum_probs=46.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcC--Chhhhhh----cC---cCCC--c-cc--c-ChHHHhhcCCEE
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAP--SERFKLH----WP---EPMD--F-AL--N-DNHRIIKEAEYV 128 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r--~~e~~~~----l~---~~~g--~-~~--~-s~~e~~~~aDvI 128 (341)
|||.|||+ |.+|+.++..|+..|+ ..++.++|+ ++++++. +. ...+ + .. . +..++++++|+|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~--~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~V 78 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF--MKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVV 78 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT--CCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC--CCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEE
Confidence 58999999 9999999999998874 247899998 7654431 11 1111 2 21 1 247789999999
Q ss_pred EEee
Q psy316 129 FLAM 132 (341)
Q Consensus 129 ilaV 132 (341)
|++.
T Consensus 79 i~~A 82 (313)
T 1hye_A 79 IITS 82 (313)
T ss_dssp EECC
T ss_pred EECC
Confidence 9886
No 364
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.62 E-value=0.03 Score=49.00 Aligned_cols=66 Identities=17% Similarity=0.071 Sum_probs=48.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhc--CCCCCCeEEEEcCChhhhhhcCcCCCc---cccC---hHHHhhcCCEEEEee
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRT--GLCIPAQIIASAPSERFKLHWPEPMDF---ALND---NHRIIKEAEYVFLAM 132 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~--G~~~~~~V~v~~r~~e~~~~l~~~~g~---~~~s---~~e~~~~aDvIilaV 132 (341)
++++|.|.|+ |.+|+.+++.|++. | ++|++.+|++++.+.+...... -..+ ..++++..|+||-+.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 77 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDK----FVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILT 77 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTT----CEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCC----cEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEec
Confidence 3578999985 99999999999998 5 5999999998877665322111 1222 345567899999775
No 365
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=95.58 E-value=0.031 Score=54.81 Aligned_cols=89 Identities=12% Similarity=0.196 Sum_probs=65.9
Q ss_pred CCCeEEEEccc----HHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhcCCEEEEeeChHHH
Q psy316 63 MWTKVGFIGAG----NMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKEAEYVFLAMKPQYL 137 (341)
Q Consensus 63 m~~kIgiIG~G----~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~aDvIilaV~~~~v 137 (341)
-.++|+|||++ ++|..+.++|.+.| ...|+..+... +.+ .|+ .+.+..++....|++++++|+..+
T Consensus 7 ~p~siAVvGas~~~~~~g~~v~~~l~~~g---~~~v~pVnP~~---~~i---~G~~~y~sl~~lp~~~Dlavi~vp~~~~ 77 (457)
T 2csu_A 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYK---KGKVYPVNIKE---EEV---QGVKAYKSVKDIPDEIDLAIIVVPKRFV 77 (457)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCC---SSEEEEECSSC---SEE---TTEECBSSTTSCSSCCSEEEECSCHHHH
T ss_pred CCCeEEEECcCCCCCchHHHHHHHHHHcC---CCEEEEECCCC---CeE---CCEeccCCHHHcCCCCCEEEEecCHHHH
Confidence 35789999997 89999999998875 25788777652 122 477 677777777789999999999999
Q ss_pred HHHHHHhhhcccccCCCcEEEEecCCCC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLVGVD 165 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~agi~ 165 (341)
.+++++. ... .- +.++-+..|++
T Consensus 78 ~~~v~e~-~~~---Gi-~~vv~~s~G~~ 100 (457)
T 2csu_A 78 KDTLIQC-GEK---GV-KGVVIITAGFG 100 (457)
T ss_dssp HHHHHHH-HHH---TC-CEEEECCCSST
T ss_pred HHHHHHH-HHc---CC-CEEEEecCCCC
Confidence 9999887 332 11 34555667764
No 366
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.51 E-value=0.019 Score=52.56 Aligned_cols=77 Identities=12% Similarity=0.183 Sum_probs=52.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChh-hhhh---cCcCCCc--c---ccC---hHHHhhcCCEEE
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSER-FKLH---WPEPMDF--A---LND---NHRIIKEAEYVF 129 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e-~~~~---l~~~~g~--~---~~s---~~e~~~~aDvIi 129 (341)
|+++|.|+|+ |.+|+.+++.|++.|+ +|++.+|++. +.+. +.. .++ . ..+ ..++++.+|+||
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~l~R~~~~~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~a~~~~d~vi 84 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGH----PTYVFTRPNSSKTTLLDEFQS-LGAIIVKGELDEHEKLVELMKKVDVVI 84 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTC----CEEEEECTTCSCHHHHHHHHH-TTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCC----cEEEEECCCCchhhHHHHhhc-CCCEEEEecCCCHHHHHHHHcCCCEEE
Confidence 6668999996 9999999999999984 8999999864 3222 222 233 1 122 345677899999
Q ss_pred EeeChH---HHHHHHHHh
Q psy316 130 LAMKPQ---YLDSAIQGL 144 (341)
Q Consensus 130 laV~~~---~v~~vl~~i 144 (341)
.+.... ....+++..
T Consensus 85 ~~a~~~~~~~~~~l~~aa 102 (318)
T 2r6j_A 85 SALAFPQILDQFKILEAI 102 (318)
T ss_dssp ECCCGGGSTTHHHHHHHH
T ss_pred ECCchhhhHHHHHHHHHH
Confidence 988643 234455443
No 367
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=95.50 E-value=0.043 Score=52.48 Aligned_cols=92 Identities=12% Similarity=0.143 Sum_probs=55.9
Q ss_pred CCeEEEEcc-cHHHHHHHH-HHHhcCCCCCCeEE-EEcCChhh-hhhcCcCCCccccC--hHHHhhcCCEEEEeeChHHH
Q psy316 64 WTKVGFIGA-GNMAQAVAT-SLIRTGLCIPAQII-ASAPSERF-KLHWPEPMDFALND--NHRIIKEAEYVFLAMKPQYL 137 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~-~L~~~G~~~~~~V~-v~~r~~e~-~~~l~~~~g~~~~s--~~e~~~~aDvIilaV~~~~v 137 (341)
++||||||+ |..|.-|.+ -|.++.+ +..++. +..++..+ ...+..+ ...+.+ ..+.+.++|+||+|+|...-
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~-~~~~l~~~ss~~aG~~~~~~~~~-~~~v~~~~~~~~~~~vDvvf~a~~~~~s 81 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDF-DLIEPVFFSTSNAGGKAPSFAKN-ETTLKDATSIDDLKKCDVIITCQGGDYT 81 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGG-GGSEEEEEESSCTTSBCCTTCCS-CCBCEETTCHHHHHTCSEEEECSCHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCC-CceEEEEEechhcCCCHHHcCCC-ceEEEeCCChhHhcCCCEEEECCChHHH
Confidence 578999997 999999999 5555432 223554 44443211 1223221 121111 12346789999999999887
Q ss_pred HHHHHHhhhcccccCCC--cEEEEecCC
Q psy316 138 DSAIQGLVNDKVTLNSS--RCIISMLVG 163 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~--~iIVs~~ag 163 (341)
.+....+ . ..+ ++||+..+.
T Consensus 82 ~~~~~~~-~-----~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 82 NDVFPKL-R-----AAGWNGYWIDAASS 103 (377)
T ss_dssp HHHHHHH-H-----HTTCCSEEEECSST
T ss_pred HHHHHHH-H-----HCCCCEEEEeCCcc
Confidence 7777665 2 234 488988653
No 368
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.48 E-value=0.032 Score=56.45 Aligned_cols=35 Identities=31% Similarity=0.368 Sum_probs=31.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSE 101 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~ 101 (341)
..||.|||+|.+|+.+++.|..+|. .+|+++|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGV---G~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGV---RKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---CEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---CEEEEEcCCC
Confidence 4689999999999999999999996 6899999854
No 369
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.47 E-value=0.018 Score=52.26 Aligned_cols=68 Identities=18% Similarity=0.137 Sum_probs=48.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhh--hhcCcCCCc--c---ccC---hHHHhhcCCEEEEe
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFK--LHWPEPMDF--A---LND---NHRIIKEAEYVFLA 131 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~--~~l~~~~g~--~---~~s---~~e~~~~aDvIila 131 (341)
++|+|.|.|+ |.+|+.+++.|++.|. ++|++.+|++++. +.+.. .++ . ..+ ..++++.+|+||.+
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~~V~~~~R~~~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 4 DKKLVVVFGGTGAQGGSVARTLLEDGT---FKVRVVTRNPRKKAAKELRL-QGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCS---SEEEEEESCTTSHHHHHHHH-TTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCC---ceEEEEEcCCCCHHHHHHHH-CCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 3478999988 9999999999999871 3999999987653 22322 233 1 222 34567789999998
Q ss_pred eCh
Q psy316 132 MKP 134 (341)
Q Consensus 132 V~~ 134 (341)
...
T Consensus 80 a~~ 82 (299)
T 2wm3_A 80 TNY 82 (299)
T ss_dssp CCH
T ss_pred CCC
Confidence 753
No 370
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=95.45 E-value=0.02 Score=54.09 Aligned_cols=91 Identities=13% Similarity=0.176 Sum_probs=56.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEc-C-ChhhhhhcCcCCCccccC-hHHHhhcCCEEEEeeChHHHHHH
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASA-P-SERFKLHWPEPMDFALND-NHRIIKEAEYVFLAMKPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~-r-~~e~~~~l~~~~g~~~~s-~~e~~~~aDvIilaV~~~~v~~v 140 (341)
+||+||| .|..|.-|.+.|.++.| +..++.... + +..+.-.+... ...+.+ ..+.+.++|+||+|+|...-.+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~f-p~~el~~~~s~~~aG~~~~~~~~-~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~ 79 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDF-PASAVRFFASARSQGRKLAFRGQ-EIEVEDAETADPSGLDIALFSAGSAMSKVQ 79 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTC-CEEEEEEEECTTTSSCEEEETTE-EEEEEETTTSCCTTCSEEEECSCHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CceEEEEEECcccCCCceeecCC-ceEEEeCCHHHhccCCEEEECCChHHHHHH
Confidence 6899999 59999999998888753 333455443 2 21111112110 111111 12335789999999999887777
Q ss_pred HHHhhhcccccCCCcEEEEecCC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~ag 163 (341)
...+ + ..+..||++++.
T Consensus 80 a~~~----~--~~G~~vID~Sa~ 96 (344)
T 3tz6_A 80 APRF----A--AAGVTVIDNSSA 96 (344)
T ss_dssp HHHH----H--HTTCEEEECSST
T ss_pred HHHH----H--hCCCEEEECCCc
Confidence 7665 3 467789988664
No 371
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.43 E-value=0.019 Score=54.18 Aligned_cols=24 Identities=17% Similarity=0.256 Sum_probs=21.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhc
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRT 86 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~ 86 (341)
|++||||+|+|++|+.+.+.|.++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~ 24 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGR 24 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHC
T ss_pred CceEEEEECCCHHHHHHHHHHHhc
Confidence 557999999999999999999886
No 372
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=95.36 E-value=0.052 Score=51.79 Aligned_cols=91 Identities=13% Similarity=0.163 Sum_probs=55.2
Q ss_pred CeEEEEcc-cHHHHHHHH-HHHhcCCCCCCeEE-EEcCChhh-hhhcCcCCCccccC--hHHHhhcCCEEEEeeChHHHH
Q psy316 65 TKVGFIGA-GNMAQAVAT-SLIRTGLCIPAQII-ASAPSERF-KLHWPEPMDFALND--NHRIIKEAEYVFLAMKPQYLD 138 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~-~L~~~G~~~~~~V~-v~~r~~e~-~~~l~~~~g~~~~s--~~e~~~~aDvIilaV~~~~v~ 138 (341)
|||||||+ |..|.-|.+ -|.++.+ +..++. +..|+..+ ...+... ...+.+ ..+.+.++|+||+|+|...-.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~-~~~~l~~~ss~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~ 78 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDF-DLIEPVFFSTSQIGVPAPNFGKD-AGMLHDAFDIESLKQLDAVITCQGGSYTE 78 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGG-GGSEEEEEESSSTTSBCCCSSSC-CCBCEETTCHHHHTTCSEEEECSCHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCC-CceEEEEEeccccCcCHHHhCCC-ceEEEecCChhHhccCCEEEECCChHHHH
Confidence 58999997 999999999 5555432 223544 44554211 1223221 121211 123467899999999998877
Q ss_pred HHHHHhhhcccccCCC--cEEEEecCC
Q psy316 139 SAIQGLVNDKVTLNSS--RCIISMLVG 163 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~--~iIVs~~ag 163 (341)
+....+ . ..+ .+||+..+.
T Consensus 79 ~~~~~~-~-----~~G~k~~VID~ss~ 99 (370)
T 3pzr_A 79 KVYPAL-R-----QAGWKGYWIDAAST 99 (370)
T ss_dssp HHHHHH-H-----HTTCCCEEEECSST
T ss_pred HHHHHH-H-----HCCCCEEEEeCCch
Confidence 777665 2 234 488988653
No 373
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.34 E-value=0.013 Score=53.64 Aligned_cols=42 Identities=12% Similarity=0.085 Sum_probs=36.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCc
Q psy316 64 WTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPE 109 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~ 109 (341)
.+++.|+| +|-+|.+++..|.+.|. +|++++|++++++.+.+
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~----~V~i~~R~~~~~~~l~~ 161 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGA----EVVLCGRKLDKAQAAAD 161 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC----EEEEEECCHHHHHHHHH
Confidence 36788999 89999999999999995 79999999888776654
No 374
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.33 E-value=0.022 Score=54.01 Aligned_cols=90 Identities=12% Similarity=0.111 Sum_probs=53.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEE-EEc-C-Chhhhhh---cCcCC-----------------C--c-cc--
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQII-ASA-P-SERFKLH---WPEPM-----------------D--F-AL-- 115 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~-v~~-r-~~e~~~~---l~~~~-----------------g--~-~~-- 115 (341)
++||||+|+|.+|..+.+.|.++. .-+|. +.+ + +.+.+.. ...-+ | + ..
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p---~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~ 93 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERN---DITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQA 93 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCS---SCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECC
T ss_pred ceEEEEECCCHHHHHHHHHHHcCC---CeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEec
Confidence 469999999999999999998763 13554 444 3 3331111 11111 1 1 11
Q ss_pred cChHHH-h--hcCCEEEEeeChHHHHHHHHHhhhcccccCCCc--EEEEecC
Q psy316 116 NDNHRI-I--KEAEYVFLAMKPQYLDSAIQGLVNDKVTLNSSR--CIISMLV 162 (341)
Q Consensus 116 ~s~~e~-~--~~aDvIilaV~~~~v~~vl~~i~~~~l~~~~~~--iIVs~~a 162 (341)
.++.++ . ..+|+||.|++...-.+..... + ..|. +|||..+
T Consensus 94 ~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~----l--~~GakkvVId~pa 139 (354)
T 3cps_A 94 KDPAEIPWGASGAQIVCESTGVFTTEEKASLH----L--KGGAKKVIISAPP 139 (354)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCSHHHHGGG----G--TTTCSEEEESSCC
T ss_pred CChHHCCcccCCCCEEEECCCchhhHHHHHHH----H--HcCCcEEEEeCCC
Confidence 144443 1 4799999999977655555443 4 4444 8888744
No 375
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=95.33 E-value=0.091 Score=46.14 Aligned_cols=85 Identities=9% Similarity=0.133 Sum_probs=52.8
Q ss_pred CCCe-EEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee-----ChH
Q psy316 63 MWTK-VGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM-----KPQ 135 (341)
Q Consensus 63 m~~k-IgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV-----~~~ 135 (341)
|..| +.|.|+ |.+|.++++.|++.|. +|++.+|++++++.+.+++ .+ .....+.++.+ .+.
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~-~~~~~~~~~~~d~d~~~~~ 79 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGA----SVVLLGRTEASLAEVSDQI-------KS-AGQPQPLIIALNLENATAQ 79 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH-TTSCCCEEEECCTTTCCHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEEecCHHHHHHHHHHH-------Hh-cCCCCceEEEeccccCCHH
Confidence 4444 555555 9999999999999994 8999999988877654421 00 01112222222 345
Q ss_pred HHHHHHHHhhhcccccCCCcEEEEecC
Q psy316 136 YLDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 136 ~v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.+..+++++ ...+ .+=.++|++++
T Consensus 80 ~~~~~~~~~-~~~~--g~id~lv~nAg 103 (247)
T 3i1j_A 80 QYRELAARV-EHEF--GRLDGLLHNAS 103 (247)
T ss_dssp HHHHHHHHH-HHHH--SCCSEEEECCC
T ss_pred HHHHHHHHH-HHhC--CCCCEEEECCc
Confidence 677777766 5444 33347787754
No 376
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=95.32 E-value=0.069 Score=47.78 Aligned_cols=84 Identities=11% Similarity=0.046 Sum_probs=53.2
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.| .|.+|.++++.|++.|. +|++.+|++++++.+.++ ..+.....++.++.+ .+..+.++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~v~~~ 82 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGA----KLSLVDVSSEGLEASKAA-------VLETAPDAEVLTTVADVSDEAQVEAY 82 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHH-------HHHHCTTCCEEEEECCTTSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHH-------HHhhcCCceEEEEEccCCCHHHHHHH
Confidence 4455555 58999999999999994 999999998776654332 111111234555443 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|+.++
T Consensus 83 ~~~~-~~~~--g~id~lv~nAg 101 (267)
T 1iy8_A 83 VTAT-TERF--GRIDGFFNNAG 101 (267)
T ss_dssp HHHH-HHHH--SCCSEEEECCC
T ss_pred HHHH-HHHc--CCCCEEEECCC
Confidence 7766 4444 33347777654
No 377
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=95.31 E-value=0.069 Score=48.17 Aligned_cols=99 Identities=11% Similarity=0.119 Sum_probs=56.2
Q ss_pred CCCcCCCCCCCCcccCCCCCCCeEEEE-c-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHH
Q psy316 44 RPVRKSDMGMEDSVEHHVPMWTKVGFI-G-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRI 121 (341)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~m~~kIgiI-G-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~ 121 (341)
.|..++.|...+. +.|..|+.+| | .|-+|.++++.|++.|. +|++.+|++++++.+.+++ .+
T Consensus 9 ~~~~~~~m~~~~~----~~l~gk~~lVTGas~gIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~l-------~~- 72 (271)
T 4ibo_A 9 GLVPRGSMSNQII----FDLGGRTALVTGSSRGLGRAMAEGLAVAGA----RILINGTDPSRVAQTVQEF-------RN- 72 (271)
T ss_dssp ---------CCGG----GCCTTCEEEETTCSSHHHHHHHHHHHHTTC----EEEECCSCHHHHHHHHHHH-------HH-
T ss_pred CCCCcccCccccc----cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------Hh-
Confidence 4455555554432 2354455555 4 58999999999999994 9999999988776654421 00
Q ss_pred hhcCCEEEEee---ChHHHHHHHHHhhhcccccCCCcEEEEecC
Q psy316 122 IKEAEYVFLAM---KPQYLDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 122 ~~~aDvIilaV---~~~~v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
...++.++.+ .+..+.++++++ ...+ .+=.++|++++
T Consensus 73 -~~~~~~~~~~Dv~d~~~v~~~~~~~-~~~~--g~iD~lv~nAg 112 (271)
T 4ibo_A 73 -VGHDAEAVAFDVTSESEIIEAFARL-DEQG--IDVDILVNNAG 112 (271)
T ss_dssp -TTCCEEECCCCTTCHHHHHHHHHHH-HHHT--CCCCEEEECCC
T ss_pred -cCCceEEEEcCCCCHHHHHHHHHHH-HHHC--CCCCEEEECCC
Confidence 1223444433 356677777776 5444 33347787644
No 378
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.30 E-value=0.048 Score=54.57 Aligned_cols=68 Identities=10% Similarity=0.143 Sum_probs=51.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cccCh--HHH-----hhcCCEEEEeeC
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALNDN--HRI-----IKEAEYVFLAMK 133 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~s~--~e~-----~~~aDvIilaV~ 133 (341)
++++|.|+|+|.+|..+++.|.+.|+ ++++.+.++++.+.+.+++++ ...|. .+. +.++|.+|+ +.
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~~~----~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t~ 200 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESRNH----LFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-NL 200 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTTTC----CEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-CS
T ss_pred cCCeEEEECCChHHHHHHHHHHHCCC----CEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-eC
Confidence 56789999999999999999998884 899999999998888774454 22221 222 468999987 44
Q ss_pred hH
Q psy316 134 PQ 135 (341)
Q Consensus 134 ~~ 135 (341)
.+
T Consensus 201 ~D 202 (565)
T 4gx0_A 201 SD 202 (565)
T ss_dssp CH
T ss_pred Cc
Confidence 43
No 379
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.29 E-value=0.032 Score=50.65 Aligned_cols=66 Identities=15% Similarity=0.215 Sum_probs=47.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCCh------hhhhh---cCcCCCc--c---ccC---hHHHhhcC
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSE------RFKLH---WPEPMDF--A---LND---NHRIIKEA 125 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~------e~~~~---l~~~~g~--~---~~s---~~e~~~~a 125 (341)
+++|.|+|+ |.+|+.+++.|++.|+ +|++..|++ ++.+. +.. .|+ . ..+ ..++++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~l~R~~~~~~~~~~~~~~~~l~~-~~v~~v~~D~~d~~~l~~~~~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH----PTFLLVRESTASSNSEKAQLLESFKA-SGANIVHGSIDDHASLVEAVKNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC----CEEEECCCCCTTTTHHHHHHHHHHHT-TTCEEECCCTTCHHHHHHHHHTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC----CEEEEECCcccccCHHHHHHHHHHHh-CCCEEEEeccCCHHHHHHHHcCC
Confidence 368999997 9999999999999984 899999973 33322 222 243 1 122 34567789
Q ss_pred CEEEEeeCh
Q psy316 126 EYVFLAMKP 134 (341)
Q Consensus 126 DvIilaV~~ 134 (341)
|+||.+...
T Consensus 79 d~vi~~a~~ 87 (308)
T 1qyc_A 79 DVVISTVGS 87 (308)
T ss_dssp SEEEECCCG
T ss_pred CEEEECCcc
Confidence 999998864
No 380
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.26 E-value=0.015 Score=55.68 Aligned_cols=24 Identities=17% Similarity=0.256 Sum_probs=21.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhc
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRT 86 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~ 86 (341)
|++||||+|+|++|..+++.|.++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~ 24 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGR 24 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHC
T ss_pred CCcEEEEECcCHHHHHHHHHHhcC
Confidence 557999999999999999999876
No 381
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.25 E-value=0.027 Score=51.68 Aligned_cols=71 Identities=17% Similarity=0.249 Sum_probs=54.4
Q ss_pred CCeEEEEcccH-HHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHHH
Q psy316 64 WTKVGFIGAGN-MAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAIQ 142 (341)
Q Consensus 64 ~~kIgiIG~G~-mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl~ 142 (341)
.+++.|||.|+ .|..++..|...|. +|+++.+.. .++.+.+++||+||.+++...+ +.
T Consensus 161 Gk~vvVvGrs~iVG~plA~lL~~~gA----tVtv~hs~T--------------~~L~~~~~~ADIVI~Avg~p~~---I~ 219 (286)
T 4a5o_A 161 GMDAVVVGASNIVGRPMALELLLGGC----TVTVTHRFT--------------RDLADHVSRADLVVVAAGKPGL---VK 219 (286)
T ss_dssp TCEEEEECTTSTTHHHHHHHHHHTTC----EEEEECTTC--------------SCHHHHHHTCSEEEECCCCTTC---BC
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCC----eEEEEeCCC--------------cCHHHHhccCCEEEECCCCCCC---CC
Confidence 47899999877 79999999999884 899987631 2467788999999999974221 11
Q ss_pred HhhhcccccCCCcEEEEe
Q psy316 143 GLVNDKVTLNSSRCIISM 160 (341)
Q Consensus 143 ~i~~~~l~~~~~~iIVs~ 160 (341)
...+ +++.+||++
T Consensus 220 ---~~~v--k~GavVIDv 232 (286)
T 4a5o_A 220 ---GEWI--KEGAIVIDV 232 (286)
T ss_dssp ---GGGS--CTTCEEEEC
T ss_pred ---HHHc--CCCeEEEEe
Confidence 3346 788888876
No 382
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=95.21 E-value=0.088 Score=47.12 Aligned_cols=86 Identities=8% Similarity=0.049 Sum_probs=55.2
Q ss_pred CCCeE-EEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MWTKV-GFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~~kI-giIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
+..|+ .|.| .|-+|.++++.|++.|. +|++.+|++++++.+.+++ .+......+.++.+ .+..+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~l-------~~~~~~~~~~~~~~Dv~~~~~v 74 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA----AVAFCARDGERLRAAESAL-------RQRFPGARLFASVCDVLDALQV 74 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HHHSTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------HHhcCCceEEEEeCCCCCHHHH
Confidence 44444 4555 58999999999999995 8999999988876654421 11111223555544 35677
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
..+++++ ...+ .+=.++|+.++
T Consensus 75 ~~~~~~~-~~~~--g~id~lvnnAg 96 (265)
T 3lf2_A 75 RAFAEAC-ERTL--GCASILVNNAG 96 (265)
T ss_dssp HHHHHHH-HHHH--CSCSEEEECCC
T ss_pred HHHHHHH-HHHc--CCCCEEEECCC
Confidence 7777776 5544 33357887754
No 383
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.19 E-value=0.021 Score=53.14 Aligned_cols=75 Identities=19% Similarity=0.154 Sum_probs=51.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCCh----hhhhh---cCcCCCc--c---cc---ChHHHhh--cCC
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSE----RFKLH---WPEPMDF--A---LN---DNHRIIK--EAE 126 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~----e~~~~---l~~~~g~--~---~~---s~~e~~~--~aD 126 (341)
|+|.|+|+ |.+|+.+++.|++.|+ +|++..|++ ++.+. +.. .++ . .. +..++++ .+|
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~----~V~~l~R~~~~~~~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~~~d 85 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHR----PTYILARPGPRSPSKAKIFKALED-KGAIIVYGLINEQEAMEKILKEHEID 85 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTC----CEEEEECSSCCCHHHHHHHHHHHH-TTCEEEECCTTCHHHHHHHHHHTTCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCC----CEEEEECCCCCChhHHHHHHHHHh-CCcEEEEeecCCHHHHHHHHhhCCCC
Confidence 68999998 9999999999999984 899999976 34332 222 133 1 12 2345667 899
Q ss_pred EEEEeeChH---HHHHHHHHh
Q psy316 127 YVFLAMKPQ---YLDSAIQGL 144 (341)
Q Consensus 127 vIilaV~~~---~v~~vl~~i 144 (341)
+||.+.... ....+++..
T Consensus 86 ~Vi~~a~~~n~~~~~~l~~aa 106 (346)
T 3i6i_A 86 IVVSTVGGESILDQIALVKAM 106 (346)
T ss_dssp EEEECCCGGGGGGHHHHHHHH
T ss_pred EEEECCchhhHHHHHHHHHHH
Confidence 999988653 334555444
No 384
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.15 E-value=0.034 Score=51.00 Aligned_cols=67 Identities=25% Similarity=0.217 Sum_probs=46.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcC------CCc--c-------ccChHHHhhcC
Q psy316 62 PMWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEP------MDF--A-------LNDNHRIIKEA 125 (341)
Q Consensus 62 ~m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~------~g~--~-------~~s~~e~~~~a 125 (341)
...++|.|.|+ |-+|+.+++.|++.|+ +|++.+|++++.+.+.+. .++ . ..+..++++.+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 84 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY----KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA 84 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC----EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCC
Confidence 34578999987 9999999999999984 999999987765433210 011 1 12233455678
Q ss_pred CEEEEee
Q psy316 126 EYVFLAM 132 (341)
Q Consensus 126 DvIilaV 132 (341)
|+||-+.
T Consensus 85 d~vih~A 91 (342)
T 1y1p_A 85 AGVAHIA 91 (342)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9999775
No 385
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=95.13 E-value=0.071 Score=46.94 Aligned_cols=78 Identities=10% Similarity=0.064 Sum_probs=52.6
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHHH
Q psy316 66 KVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSAI 141 (341)
Q Consensus 66 kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~vl 141 (341)
++.|.|+ |-+|.++++.|++.|. +|++.+|++++++.+.+++ . ..+.++.+ .+..++.++
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~-----------~-~~~~~~~~D~~~~~~v~~~~ 68 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGH----QVSMMGRRYQRLQQQELLL-----------G-NAVIGIVADLAHHEDVDVAF 68 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-----------G-GGEEEEECCTTSHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHh-----------c-CCceEEECCCCCHHHHHHHH
Confidence 4556665 8999999999999994 9999999988877654421 1 12444443 356677777
Q ss_pred HHhhhcccccCCCcEEEEecC
Q psy316 142 QGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++ ...+ .+=.++|+.++
T Consensus 69 ~~~-~~~~--g~id~lvnnAg 86 (235)
T 3l6e_A 69 AAA-VEWG--GLPELVLHCAG 86 (235)
T ss_dssp HHH-HHHH--CSCSEEEEECC
T ss_pred HHH-HHhc--CCCcEEEECCC
Confidence 776 5444 33357787644
No 386
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=95.12 E-value=0.093 Score=47.11 Aligned_cols=83 Identities=7% Similarity=0.104 Sum_probs=52.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.| .|.+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ....++.++.+ .+..+..+
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~l-------~~-~~~~~~~~~~~Dl~~~~~v~~~ 89 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGC----SVVVASRNLEEASEAAQKL-------TE-KYGVETMAFRCDVSNYEEVKKL 89 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH-HHCCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------HH-hcCCeEEEEEcCCCCHHHHHHH
Confidence 4455665 48999999999999994 8999999987766543311 00 01234444443 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|++++
T Consensus 90 ~~~~-~~~~--g~iD~lvnnAg 108 (267)
T 1vl8_A 90 LEAV-KEKF--GKLDTVVNAAG 108 (267)
T ss_dssp HHHH-HHHH--SCCCEEEECCC
T ss_pred HHHH-HHHc--CCCCEEEECCC
Confidence 7766 4444 33347777644
No 387
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.12 E-value=0.026 Score=52.11 Aligned_cols=35 Identities=20% Similarity=0.361 Sum_probs=31.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSE 101 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~ 101 (341)
..||.|||+|.+|+.++..|..+|. .+|+++|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGV---G~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGI---GKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTC---SEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCC---CEEEEECCCc
Confidence 4689999999999999999999996 6899999864
No 388
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=95.10 E-value=0.13 Score=45.76 Aligned_cols=85 Identities=12% Similarity=0.182 Sum_probs=55.4
Q ss_pred CCCCeEEEE-c-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHH
Q psy316 62 PMWTKVGFI-G-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQY 136 (341)
Q Consensus 62 ~m~~kIgiI-G-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~ 136 (341)
.+..|+.+| | .|-+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ...++.++.+ .+..
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~--~~~~~~~~~~Dv~d~~~ 75 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGA----SVVVTDLKSEGAEAVAAAI-------RQ--AGGKAIGLECNVTDEQH 75 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTC----EEEEEESSHHHHHHHHHHH-------HH--TTCCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------Hh--cCCcEEEEECCCCCHHH
Confidence 344455555 4 58999999999999995 8999999988776654421 10 1234555544 3566
Q ss_pred HHHHHHHhhhcccccCCCcEEEEecC
Q psy316 137 LDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 137 v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+.++++++ ...+ .+=.++|+.++
T Consensus 76 v~~~~~~~-~~~~--g~id~lv~nAg 98 (256)
T 3gaf_A 76 REAVIKAA-LDQF--GKITVLVNNAG 98 (256)
T ss_dssp HHHHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHHHH-HHHc--CCCCEEEECCC
Confidence 77777776 5444 33357787654
No 389
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=95.09 E-value=0.055 Score=47.93 Aligned_cols=83 Identities=10% Similarity=0.124 Sum_probs=53.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEeeChHHHHHHH
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAMKPQYLDSAI 141 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV~~~~v~~vl 141 (341)
|.+++.|.|+ |-+|.++++.|++.|. +|++.+|++++.+.+.++..-.. .-.+|+ ..+..+.+++
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~------~~~~Dv----~~~~~v~~~~ 66 (247)
T 3dii_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGD----KVCFIDIDEKRSADFAKERPNLF------YFHGDV----ADPLTLKKFV 66 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHTTCTTEE------EEECCT----TSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHhcccCC------eEEeeC----CCHHHHHHHH
Confidence 5566777765 8999999999999994 99999999888777655321000 001121 2356677777
Q ss_pred HHhhhcccccCCCcEEEEecC
Q psy316 142 QGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++ ...+ .+=.++|++++
T Consensus 67 ~~~-~~~~--g~id~lv~nAg 84 (247)
T 3dii_A 67 EYA-MEKL--QRIDVLVNNAC 84 (247)
T ss_dssp HHH-HHHH--SCCCEEEECCC
T ss_pred HHH-HHHc--CCCCEEEECCC
Confidence 766 5444 33347777654
No 390
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=95.08 E-value=0.17 Score=44.59 Aligned_cols=82 Identities=12% Similarity=0.146 Sum_probs=53.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ....+.++.+ .+..+.++
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~--~~~~~~~~~~D~~~~~~~~~~ 76 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGA----AVVVADINAEAAEAVAKQI-------VA--DGGTAISVAVDVSDPESAKAM 76 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH--TTCEEEEEECCTTSHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHH-------Hh--cCCcEEEEEccCCCHHHHHHH
Confidence 34556665 8999999999999994 8999999988877654421 11 1233444444 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|++++
T Consensus 77 ~~~~-~~~~--g~id~li~~Ag 95 (253)
T 3qiv_A 77 ADRT-LAEF--GGIDYLVNNAA 95 (253)
T ss_dssp HHHH-HHHH--SCCCEEEECCC
T ss_pred HHHH-HHHc--CCCCEEEECCC
Confidence 7776 5444 33347777643
No 391
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.08 E-value=0.034 Score=50.53 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=46.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCC-----hhhhhhc---CcCCCc--c---ccC---hHHHhhcCC
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPS-----ERFKLHW---PEPMDF--A---LND---NHRIIKEAE 126 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~-----~e~~~~l---~~~~g~--~---~~s---~~e~~~~aD 126 (341)
+|+|.|+|+ |.+|+.+++.|++.|+ +|++.+|+ +++.+.+ .. .++ . ..+ ..++++.+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~l~~~~~~~d 78 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH----PTYVLFRPEVVSNIDKVQMLLYFKQ-LGAKLIEASLDDHQRLVDALKQVD 78 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC----CEEEECCSCCSSCHHHHHHHHHHHT-TTCEEECCCSSCHHHHHHHHTTCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC----cEEEEECCCcccchhHHHHHHHHHh-CCeEEEeCCCCCHHHHHHHHhCCC
Confidence 468999985 9999999999999984 89999998 4444322 12 233 1 222 345677899
Q ss_pred EEEEeeC
Q psy316 127 YVFLAMK 133 (341)
Q Consensus 127 vIilaV~ 133 (341)
+||.+..
T Consensus 79 ~vi~~a~ 85 (313)
T 1qyd_A 79 VVISALA 85 (313)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9998874
No 392
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=95.08 E-value=0.057 Score=51.74 Aligned_cols=96 Identities=20% Similarity=0.173 Sum_probs=64.1
Q ss_pred CeEEEEcccHHHHHHHHH-HHhcCCCCCCeEEEEcCChhhhhhcCcC--C---------------Cc-ccc-C---hHHH
Q psy316 65 TKVGFIGAGNMAQAVATS-LIRTGLCIPAQIIASAPSERFKLHWPEP--M---------------DF-ALN-D---NHRI 121 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~-L~~~G~~~~~~V~v~~r~~e~~~~l~~~--~---------------g~-~~~-s---~~e~ 121 (341)
||+..+|+||+|.++... |.++| ++|++.++++...+.|+++ | ++ ... . ..+.
T Consensus 1 mkavhfGaGniGRGfig~~l~~~g----~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v~~v~ai~s~~~~~~~~ 76 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADAG----IQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTVSGVNAVSSIGDDVVDL 76 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHTT----CEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEEESCEEEETTSSHHHHH
T ss_pred CcEEEECCCccchhhHHHHHHHcC----CeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEEEEEEEEeCcHHHHHHH
Confidence 689999999999776665 45677 5999999998877777643 1 12 111 1 2235
Q ss_pred hhcCCEEEEeeChHHHHHHHHHhhhcccc-----cC-CCcEEEEecCCCC
Q psy316 122 IKEAEYVFLAMKPQYLDSAIQGLVNDKVT-----LN-SSRCIISMLVGVD 165 (341)
Q Consensus 122 ~~~aDvIilaV~~~~v~~vl~~i~~~~l~-----~~-~~~iIVs~~agi~ 165 (341)
+.++|+|..++.|+.+..+...+ ...|. .. +.-.|++|-+-..
T Consensus 77 i~~adlitT~vG~~~l~~i~~~l-~~~L~~R~~~~~~~pltilsCeN~~~ 125 (382)
T 3h2z_A 77 IAQVDLVTTAVGPVVLERIAPAI-AKGLVKRKEQGNESPLNIIACENMVR 125 (382)
T ss_dssp HTTCSEEEECCCHHHHHHTHHHH-HHHHHHHHHHTCCSCEEEEECCSSTT
T ss_pred HcCCCEEEECCCcccHHHHHHHH-HHHHHHHHHcCCCCCcEEEECCCccc
Confidence 67899999999988776655443 32221 01 3446899887665
No 393
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=95.08 E-value=0.13 Score=45.71 Aligned_cols=84 Identities=11% Similarity=0.096 Sum_probs=52.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhh-cCCEEEEe---eChHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIK-EAEYVFLA---MKPQYLDS 139 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~-~aDvIila---V~~~~v~~ 139 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|++++++.+.+++ .+.-. .+.++..- ..+..+.+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~ 81 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGA----TVILLGRNEEKLRQVASHI-------NEETGRQPQWFILDLLTCTSENCQQ 81 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HHHHSCCCEEEECCTTTCCHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------HhhcCCCceEEEEecccCCHHHHHH
Confidence 34555555 8999999999999994 8999999988877654421 11111 22222222 23456777
Q ss_pred HHHHhhhcccccCCCcEEEEecC
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++++ ...+ .+=.++|+.++
T Consensus 82 ~~~~~-~~~~--g~id~lv~nAg 101 (252)
T 3f1l_A 82 LAQRI-AVNY--PRLDGVLHNAG 101 (252)
T ss_dssp HHHHH-HHHC--SCCSEEEECCC
T ss_pred HHHHH-HHhC--CCCCEEEECCc
Confidence 77776 5444 33357787654
No 394
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.07 E-value=0.033 Score=52.32 Aligned_cols=66 Identities=15% Similarity=0.183 Sum_probs=46.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhh--hhcCcCCCc--c----ccC---hHHHhhcCCEEEEe
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFK--LHWPEPMDF--A----LND---NHRIIKEAEYVFLA 131 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~--~~l~~~~g~--~----~~s---~~e~~~~aDvIila 131 (341)
.|+|.|.|+ |.+|+.+++.|++.|+ +|++.+|++++. +.+.+..++ . ..+ ..++++.+|+||.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~ 80 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGH----HVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFIN 80 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTC----CEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC----EEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEc
Confidence 578999985 9999999999999884 899999987553 333321122 1 223 34456789999977
Q ss_pred eC
Q psy316 132 MK 133 (341)
Q Consensus 132 V~ 133 (341)
..
T Consensus 81 a~ 82 (352)
T 1xgk_A 81 TT 82 (352)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 395
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.07 E-value=0.057 Score=54.54 Aligned_cols=34 Identities=32% Similarity=0.380 Sum_probs=30.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCC
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPS 100 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~ 100 (341)
..||.|||+|.+|+.+++.|..+|. .+|+++|.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGV---G~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGV---RKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC---CEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---CEEEEECCC
Confidence 4689999999999999999999996 689999765
No 396
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.06 E-value=0.024 Score=51.99 Aligned_cols=77 Identities=12% Similarity=0.093 Sum_probs=51.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCCh------hhhhhc---CcCCCc--c---ccC---hHHHhhc
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSE------RFKLHW---PEPMDF--A---LND---NHRIIKE 124 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~------e~~~~l---~~~~g~--~---~~s---~~e~~~~ 124 (341)
|+|+|.|+|+ |.+|+++++.|++.|+ +|++.+|++ ++.+.+ .. .++ . ..+ ..++++.
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~~~~~~~l~~~~~-~~v~~v~~D~~d~~~l~~a~~~ 77 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSH----PTFIYARPLTPDSTPSSVQLREEFRS-MGVTIIEGEMEEHEKMVSVLKQ 77 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTC----CEEEEECCCCTTCCHHHHHHHHHHHH-TTCEEEECCTTCHHHHHHHHTT
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCC----cEEEEECCcccccChHHHHHHHHhhc-CCcEEEEecCCCHHHHHHHHcC
Confidence 4578999996 9999999999999984 899999975 333322 12 133 1 122 3456778
Q ss_pred CCEEEEeeChH---HHHHHHHHh
Q psy316 125 AEYVFLAMKPQ---YLDSAIQGL 144 (341)
Q Consensus 125 aDvIilaV~~~---~v~~vl~~i 144 (341)
+|+||.+.... ....+++..
T Consensus 78 ~d~vi~~a~~~~~~~~~~l~~aa 100 (321)
T 3c1o_A 78 VDIVISALPFPMISSQIHIINAI 100 (321)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHH
T ss_pred CCEEEECCCccchhhHHHHHHHH
Confidence 99999988642 334455443
No 397
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=94.99 E-value=0.037 Score=50.47 Aligned_cols=64 Identities=17% Similarity=0.256 Sum_probs=38.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-cccChHHHhhc--CCEEEEee
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-ALNDNHRIIKE--AEYVFLAM 132 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~~~s~~e~~~~--aDvIilaV 132 (341)
|.|+|.|.|+ |.+|+.+++.|++.|+ +|++.+|++.... +.. ..+ ...+..++++. +|+||-+.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~-~~~-~Dl~d~~~~~~~~~~~~~d~vih~A 68 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNW----HAVGCGFRRARPK-FEQ-VNLLDSNAVHHIIHDFQPHVIVHCA 68 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTC----EEEEEC--------------------CHHHHHHHCCSEEEECC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCC----eEEEEccCCCCCC-eEE-ecCCCHHHHHHHHHhhCCCEEEECC
Confidence 5689999987 9999999999999984 9999998754311 110 011 12234455554 89999775
No 398
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=94.97 E-value=0.12 Score=46.45 Aligned_cols=79 Identities=10% Similarity=0.165 Sum_probs=54.1
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHH
Q psy316 63 MWTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLD 138 (341)
Q Consensus 63 m~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~ 138 (341)
|.+++-|-| .+-+|.++++.|++.|. +|.+++|++++++.+.++.+ ++..+.+ .+.+++
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga----~V~~~~~~~~~~~~~~~~~~-------------~~~~~~~Dv~~~~~v~ 63 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGD----KVCFIDIDEKRSADFAKERP-------------NLFYFHGDVADPLTLK 63 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHTTCT-------------TEEEEECCTTSHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHhcC-------------CEEEEEecCCCHHHHH
Confidence 666666666 47899999999999995 99999999988877665421 2222322 456777
Q ss_pred HHHHHhhhcccccCCCcEEEEec
Q psy316 139 SAIQGLVNDKVTLNSSRCIISML 161 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~ 161 (341)
++++++ ...+ .+=.++|+.+
T Consensus 64 ~~v~~~-~~~~--g~iDiLVNNA 83 (247)
T 3ged_A 64 KFVEYA-MEKL--QRIDVLVNNA 83 (247)
T ss_dssp HHHHHH-HHHH--SCCCEEEECC
T ss_pred HHHHHH-HHHc--CCCCEEEECC
Confidence 777776 5444 3334778764
No 399
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=94.96 E-value=0.23 Score=45.11 Aligned_cols=82 Identities=15% Similarity=0.141 Sum_probs=49.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhh-hhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFK-LHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDS 139 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~-~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~ 139 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|+.+.. +.+.+. .. ....++.++.+ .+..+++
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~-------~~--~~~~~~~~~~~Dv~d~~~v~~ 114 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGA----NIAIAYLDEEGDANETKQY-------VE--KEGVKCVLLPGDLSDEQHCKD 114 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHH-------HH--TTTCCEEEEESCTTSHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCchHHHHHHHHH-------HH--hcCCcEEEEECCCCCHHHHHH
Confidence 34555554 8999999999999995 899999876532 222110 00 01234555544 3566777
Q ss_pred HHHHhhhcccccCCCcEEEEecC
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++++ ...+ .+=.++|++++
T Consensus 115 ~~~~~-~~~~--g~iD~lvnnAg 134 (291)
T 3ijr_A 115 IVQET-VRQL--GSLNILVNNVA 134 (291)
T ss_dssp HHHHH-HHHH--SSCCEEEECCC
T ss_pred HHHHH-HHHc--CCCCEEEECCC
Confidence 77776 4444 33357787754
No 400
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.95 E-value=0.023 Score=48.63 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=30.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCCh
Q psy316 63 MWTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSE 101 (341)
Q Consensus 63 m~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~ 101 (341)
|...|.|||+|.-|.+.|..|.++|+ +|+++++++
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~----~V~v~Ek~~ 35 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGH----QVHLFDKSR 35 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC----CEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC----CEEEEECCC
Confidence 55679999999999999999999995 999999864
No 401
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.94 E-value=0.021 Score=55.77 Aligned_cols=67 Identities=15% Similarity=0.112 Sum_probs=49.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChh----hhhhcCcCCCc-c-c-cChHHHhhc-CCEEEEe--eC
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSER----FKLHWPEPMDF-A-L-NDNHRIIKE-AEYVFLA--MK 133 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e----~~~~l~~~~g~-~-~-~s~~e~~~~-aDvIila--V~ 133 (341)
.+||.|||.|..|.+.|+.|.+.|+ +|+++|+++. ..+.|.+ .|+ . . .+..+.+.. +|+||++ +|
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~----~V~~~D~~~~~~~~~~~~L~~-~gi~~~~g~~~~~~~~~~~d~vv~spgi~ 83 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGA----IVTVNDGKPFDENPTAQSLLE-EGIKVVCGSHPLELLDEDFCYMIKNPGIP 83 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTC----EEEEEESSCGGGCHHHHHHHH-TTCEEEESCCCGGGGGSCEEEEEECTTSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCC----EEEEEeCCcccCChHHHHHHh-CCCEEEECCChHHhhcCCCCEEEECCcCC
Confidence 4789999999999999999999994 9999998542 3345555 476 2 2 233445566 8999987 45
Q ss_pred hH
Q psy316 134 PQ 135 (341)
Q Consensus 134 ~~ 135 (341)
++
T Consensus 84 ~~ 85 (451)
T 3lk7_A 84 YN 85 (451)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 402
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.90 E-value=0.052 Score=53.27 Aligned_cols=69 Identities=12% Similarity=0.174 Sum_probs=52.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCC-c--ccc---Ch----HHHhhcCCEEEEeeC
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMD-F--ALN---DN----HRIIKEAEYVFLAMK 133 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g-~--~~~---s~----~e~~~~aDvIilaV~ 133 (341)
.++|-|+|.|++|..+|+.|.+ + ++|.+.++++++++.+++++. . ... +. ++-+.++|+++-++.
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-~----~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~ 309 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-T----YSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTN 309 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-T----SEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCS
T ss_pred ccEEEEEcchHHHHHHHHHhhh-c----CceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEccc
Confidence 3689999999999999998743 3 489999999999998887653 2 212 21 123578999999998
Q ss_pred hHHH
Q psy316 134 PQYL 137 (341)
Q Consensus 134 ~~~v 137 (341)
.+..
T Consensus 310 ~De~ 313 (461)
T 4g65_A 310 EDET 313 (461)
T ss_dssp CHHH
T ss_pred CcHH
Confidence 7653
No 403
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=94.83 E-value=0.16 Score=45.76 Aligned_cols=89 Identities=13% Similarity=0.159 Sum_probs=55.9
Q ss_pred CCCeEE-EEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHh--hcCCEEEEee---ChH
Q psy316 63 MWTKVG-FIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRII--KEAEYVFLAM---KPQ 135 (341)
Q Consensus 63 m~~kIg-iIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~--~~aDvIilaV---~~~ 135 (341)
|..|+. |.| .|-+|.++++.|.+.|. +|++.+|+.++.+.+.++.. ...+.+ ....+.++.+ .+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Dv~~~~ 75 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA----NVAIAAKSAVANPKLPGTIH----SAAAAVNAAGGQGLALKCDIREED 75 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCCSCCTTSCCCHH----HHHHHHHHHTSEEEEEECCTTCHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC----EEEEEeccchhhhhhHHHHH----HHHHHHHhcCCeEEEEeCCCCCHH
Confidence 444444 555 48999999999999994 89999999876665544210 011111 1345555555 356
Q ss_pred HHHHHHHHhhhcccccCCCcEEEEecC
Q psy316 136 YLDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 136 ~v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.+..+++++ ...+ .+=.++|++++
T Consensus 76 ~v~~~~~~~-~~~~--g~iD~lvnnAG 99 (274)
T 3e03_A 76 QVRAAVAAT-VDTF--GGIDILVNNAS 99 (274)
T ss_dssp HHHHHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHHHHH-HHHc--CCCCEEEECCC
Confidence 777888777 5544 33357887754
No 404
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=94.83 E-value=0.3 Score=43.92 Aligned_cols=83 Identities=13% Similarity=0.137 Sum_probs=54.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|+.++.+...+++ .+ .....+.++.+ .+..++.+
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~-~~~~~~~~~~~Dv~~~~~v~~~ 95 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGC----HTVIASRSLPRVLTAARKL-------AG-ATGRRCLPLSMDVRAPPAVMAA 95 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC----EEEEEESCHHHHHHHHHHH-------HH-HHSSCEEEEECCTTCHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------HH-hcCCcEEEEEcCCCCHHHHHHH
Confidence 34555555 7899999999999994 9999999987766544321 11 11334555554 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|++++
T Consensus 96 ~~~~-~~~~--g~id~lv~nAg 114 (277)
T 4fc7_A 96 VDQA-LKEF--GRIDILINCAA 114 (277)
T ss_dssp HHHH-HHHH--SCCCEEEECCC
T ss_pred HHHH-HHHc--CCCCEEEECCc
Confidence 7776 5444 33357887754
No 405
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=94.80 E-value=0.032 Score=50.73 Aligned_cols=36 Identities=14% Similarity=0.252 Sum_probs=31.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChh
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSER 102 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e 102 (341)
|+|+|.|.|+ |.+|+.+++.|++.|+ +|++.+|++.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGE----EVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC----CEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCC----EEEEEecCCc
Confidence 5689999988 9999999999999984 9999999765
No 406
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.78 E-value=0.03 Score=52.44 Aligned_cols=76 Identities=20% Similarity=0.247 Sum_probs=57.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cccChHHHhhcCCEEEEeeChH-HHHHH
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALNDNHRIIKEAEYVFLAMKPQ-YLDSA 140 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~s~~e~~~~aDvIilaV~~~-~v~~v 140 (341)
..+|.|+|+|.+|...++.+...|. +|++.++++++++.+++ +|. ...+..++.+..|+||-++... .+...
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga----~Vi~~~~~~~~~~~~~~-lGa~~v~~~~~~~~~~~D~vid~~g~~~~~~~~ 251 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGA----EVSVFARNEHKKQDALS-MGVKHFYTDPKQCKEELDFIISTIPTHYDLKDY 251 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTC----EEEEECSSSTTHHHHHH-TTCSEEESSGGGCCSCEEEEEECCCSCCCHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHh-cCCCeecCCHHHHhcCCCEEEECCCcHHHHHHH
Confidence 4689999999999999888877884 89999999998887766 787 3333333333689999999755 66666
Q ss_pred HHHh
Q psy316 141 IQGL 144 (341)
Q Consensus 141 l~~i 144 (341)
++-+
T Consensus 252 ~~~l 255 (348)
T 3two_A 252 LKLL 255 (348)
T ss_dssp HTTE
T ss_pred HHHH
Confidence 5544
No 407
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=94.74 E-value=0.083 Score=46.02 Aligned_cols=80 Identities=15% Similarity=0.116 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHH
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLD 138 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~ 138 (341)
|.++|.|.|+ |.+|.++++.|++.|+ +|++.+|++++++.+.++++ .+.++.+ .+..+.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~D~~~~~~~~ 66 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGY----RVGLMARDEKRLQALAAELE-------------GALPLPGDVREEGDWA 66 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHST-------------TCEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHhh-------------hceEEEecCCCHHHHH
Confidence 5566777765 9999999999999994 89999999877665543211 1222221 345666
Q ss_pred HHHHHhhhcccccCCCcEEEEecC
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++++ ...+ .+=.++|++++
T Consensus 67 ~~~~~~-~~~~--~~id~li~~Ag 87 (234)
T 2ehd_A 67 RAVAAM-EEAF--GELSALVNNAG 87 (234)
T ss_dssp HHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHH-HHHc--CCCCEEEECCC
Confidence 677665 4434 33347777654
No 408
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=94.74 E-value=0.088 Score=47.60 Aligned_cols=84 Identities=8% Similarity=0.117 Sum_probs=54.2
Q ss_pred CC-CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MW-TKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~-~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
+. +++.|.| .|-+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ....+.++.+ .+..+
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~-------~~--~~~~~~~~~~Dl~d~~~v 96 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA----QVAVAARHSDALQVVADEI-------AG--VGGKALPIRCDVTQPDQV 96 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESSGGGGHHHHHHH-------HH--TTCCCEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------Hh--cCCeEEEEEcCCCCHHHH
Confidence 44 4455555 48999999999999994 9999999987776554421 11 1223444443 35677
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++++++ ...+ .+=.++|++++
T Consensus 97 ~~~~~~~-~~~~--g~iD~lvnnAg 118 (276)
T 3r1i_A 97 RGMLDQM-TGEL--GGIDIAVCNAG 118 (276)
T ss_dssp HHHHHHH-HHHH--SCCSEEEECCC
T ss_pred HHHHHHH-HHHc--CCCCEEEECCC
Confidence 7777776 5444 33357787644
No 409
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.73 E-value=0.031 Score=50.73 Aligned_cols=76 Identities=17% Similarity=0.194 Sum_probs=51.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCCh-------hhhhhc---CcCCCc--c---ccC---hHHHhhc
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSE-------RFKLHW---PEPMDF--A---LND---NHRIIKE 124 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~-------e~~~~l---~~~~g~--~---~~s---~~e~~~~ 124 (341)
+++|.|+|+ |.+|+.+++.|++.|+ +|++.+|++ ++.+.+ .. .++ . ..+ ..++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~~~~~~~~~~~l~~-~~v~~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN----PTYALVRKTITAANPETKEELIDNYQS-LGVILLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC----CEEEEECCSCCSSCHHHHHHHHHHHHH-TTCEEEECCTTCHHHHHHHHTT
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC----cEEEEECCCcccCChHHHHHHHHHHHh-CCCEEEEeCCCCHHHHHHHHhC
Confidence 368999987 9999999999999984 899999986 444322 12 233 1 122 3456778
Q ss_pred CCEEEEeeCh---HHHHHHHHHh
Q psy316 125 AEYVFLAMKP---QYLDSAIQGL 144 (341)
Q Consensus 125 aDvIilaV~~---~~v~~vl~~i 144 (341)
+|+||.+... .....+++..
T Consensus 77 ~d~vi~~a~~~~~~~~~~l~~aa 99 (307)
T 2gas_A 77 VDIVICAAGRLLIEDQVKIIKAI 99 (307)
T ss_dssp CSEEEECSSSSCGGGHHHHHHHH
T ss_pred CCEEEECCcccccccHHHHHHHH
Confidence 9999998753 3334455443
No 410
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=94.71 E-value=0.034 Score=52.17 Aligned_cols=89 Identities=9% Similarity=0.082 Sum_probs=53.9
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhh-hhcCcC-CCc-c-ccChHHHhhcCCEEEEeeChHHHHH
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFK-LHWPEP-MDF-A-LNDNHRIIKEAEYVFLAMKPQYLDS 139 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~-~~l~~~-~g~-~-~~s~~e~~~~aDvIilaV~~~~v~~ 139 (341)
|||+|+| .|.+|..+.+.|.+.++ +...+.... +.+.. +.+.-. ..+ . ..++.+ + .+|+||.|++...-.+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~-~~~~l~~~~-s~~~~g~~l~~~g~~i~v~~~~~~~-~-~~DvV~~a~g~~~s~~ 76 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNF-PLSELRLYA-SPRSAGVRLAFRGEEIPVEPLPEGP-L-PVDLVLASAGGGISRA 76 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC-CCSCCEEEE-CGGGSSCEEEETTEEEEEEECCSSC-C-CCSEEEECSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEee-ccccCCCEEEEcCceEEEEeCChhh-c-CCCEEEECCCccchHH
Confidence 5899999 89999999999987664 333443332 11111 111100 012 1 112333 4 8999999999877666
Q ss_pred HHHHhhhcccccCCCcEEEEecCC
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~ag 163 (341)
....+ + ..+..+|+..+.
T Consensus 77 ~a~~~----~--~~G~~vId~s~~ 94 (331)
T 2yv3_A 77 KALVW----A--EGGALVVDNSSA 94 (331)
T ss_dssp HHHHH----H--HTTCEEEECSSS
T ss_pred HHHHH----H--HCCCEEEECCCc
Confidence 66554 3 457788887654
No 411
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=94.68 E-value=0.13 Score=46.92 Aligned_cols=85 Identities=13% Similarity=0.171 Sum_probs=54.0
Q ss_pred CCCeEEEE-c-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MWTKVGFI-G-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~~kIgiI-G-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
+..|+.+| | .|-+|.++++.|++.|. +|++.+|++++++.+.+++.. ....++.++.+ .+..+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~l~~--------~~~~~~~~~~~Dv~d~~~v 106 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGA----NVAVAARSPRELSSVTAELGE--------LGAGNVIGVRLDVSDPGSC 106 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSGGGGHHHHHHHTT--------SSSSCEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHh--------hCCCcEEEEEEeCCCHHHH
Confidence 33455555 4 58999999999999994 999999998776654432110 01134455444 35677
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.++++++ ...+ .+=.++|+.++
T Consensus 107 ~~~~~~~-~~~~--g~iD~lvnnAg 128 (293)
T 3rih_A 107 ADAARTV-VDAF--GALDVVCANAG 128 (293)
T ss_dssp HHHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHHH-HHHc--CCCCEEEECCC
Confidence 7777776 5544 33357787654
No 412
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.68 E-value=0.14 Score=45.67 Aligned_cols=85 Identities=8% Similarity=0.085 Sum_probs=54.4
Q ss_pred CCCeEEEE-c-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MWTKVGFI-G-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~~kIgiI-G-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
+..|..+| | .|-+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ....++.++.+ .+..+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~l-------~~-~~~~~~~~~~~Dv~~~~~v 75 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA----NVAVAGRSTADIDACVADL-------DQ-LGSGKVIGVQTDVSDRAQC 75 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HT-TSSSCEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------Hh-hCCCcEEEEEcCCCCHHHH
Confidence 33344444 5 58999999999999994 9999999988876554321 00 01134555544 35667
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+.+++++ ...+ .+=.++|++++
T Consensus 76 ~~~~~~~-~~~~--g~id~lvnnAg 97 (262)
T 3pk0_A 76 DALAGRA-VEEF--GGIDVVCANAG 97 (262)
T ss_dssp HHHHHHH-HHHH--SCCSEEEECCC
T ss_pred HHHHHHH-HHHh--CCCCEEEECCC
Confidence 7777776 5444 33357787654
No 413
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=94.66 E-value=0.21 Score=45.47 Aligned_cols=90 Identities=14% Similarity=0.140 Sum_probs=49.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhh-cCcCCCc-cccChHHHh--hcCCEEEEee---ChHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLH-WPEPMDF-ALNDNHRII--KEAEYVFLAM---KPQY 136 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~-l~~~~g~-~~~s~~e~~--~~aDvIilaV---~~~~ 136 (341)
+++.|.|+ |-+|.++++.|++.|. +|++++|+++.... +... .. ......+.+ ...++.++.+ .+..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~----~V~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGA----DIIAIDVCKQLDGVKLPMS-TPDDLAETVRQVEALGRRIIASQVDVRDFDA 103 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEEECCSCCTTCCSCCC-CHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeccccccccccccc-CHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 34555555 8999999999999995 99999987321100 0000 00 000000111 1245666655 3566
Q ss_pred HHHHHHHhhhcccccCCCcEEEEecC
Q psy316 137 LDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 137 v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+..+++++ ...+ .+=.++|+.++
T Consensus 104 v~~~~~~~-~~~~--g~iD~lv~nAg 126 (299)
T 3t7c_A 104 MQAAVDDG-VTQL--GRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHHHH-HHHh--CCCCEEEECCC
Confidence 77777776 5444 33347777654
No 414
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.65 E-value=0.14 Score=48.20 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=30.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCC
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPS 100 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~ 100 (341)
..+|.|||+|.+|+.++++|..+|. .+++++|.+
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gv---g~itlvD~d 69 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGV---KGLTMLDHE 69 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC---SEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---CEEEEEECC
Confidence 4689999999999999999999996 689998754
No 415
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.65 E-value=0.15 Score=45.50 Aligned_cols=85 Identities=14% Similarity=0.195 Sum_probs=53.5
Q ss_pred CCCeEEEE-cc-c--HHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChH
Q psy316 63 MWTKVGFI-GA-G--NMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQ 135 (341)
Q Consensus 63 m~~kIgiI-G~-G--~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~ 135 (341)
+.-|+.+| |+ | -+|.++++.|.+.|. +|.+.+|+++.++.+.+.. +.....++.++.+ .+.
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga----~Vvi~~r~~~~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~ 71 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA----KLVFTYRKERSRKELEKLL--------EQLNQPEAHLYQIDVQSDE 71 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTC----EEEEEESSGGGHHHHHHHH--------GGGTCSSCEEEECCTTCHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHH--------HhcCCCcEEEEEccCCCHH
Confidence 33455555 86 3 599999999999995 9999999987766554320 1112233444443 466
Q ss_pred HHHHHHHHhhhcccccCCCcEEEEecC
Q psy316 136 YLDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 136 ~v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
++.++++++ ...+ .+=.++|+.++
T Consensus 72 ~v~~~~~~~-~~~~--G~iD~lvnnAg 95 (256)
T 4fs3_A 72 EVINGFEQI-GKDV--GNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHHHH-HHHH--CCCSEEEECCC
T ss_pred HHHHHHHHH-HHHh--CCCCEEEeccc
Confidence 777877776 5444 33346776644
No 416
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=94.63 E-value=0.18 Score=45.56 Aligned_cols=83 Identities=10% Similarity=0.063 Sum_probs=54.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHH
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDS 139 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~ 139 (341)
.+++.|.|+ |-+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ...++.++.+ .+..+.+
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~l-------~~--~~~~~~~~~~Dv~d~~~v~~ 90 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGI----AVYGCARDAKNVSAAVDGL-------RA--AGHDVDGSSCDVTSTDEVHA 90 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HT--TTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------Hh--cCCcEEEEECCCCCHHHHHH
Confidence 345666665 8999999999999995 8999999988776554321 00 1234555544 3566777
Q ss_pred HHHHhhhcccccCCCcEEEEecC
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++++ ...+ .+=.++|+.++
T Consensus 91 ~~~~~-~~~~--g~id~lv~nAg 110 (279)
T 3sju_A 91 AVAAA-VERF--GPIGILVNSAG 110 (279)
T ss_dssp HHHHH-HHHH--CSCCEEEECCC
T ss_pred HHHHH-HHHc--CCCcEEEECCC
Confidence 77776 5444 33357787654
No 417
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=94.63 E-value=0.029 Score=52.86 Aligned_cols=31 Identities=16% Similarity=0.234 Sum_probs=24.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEE
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIA 96 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v 96 (341)
+||||+|+|.+|..+.+.|.+++ .+.-+|..
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~-~p~~eiva 32 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRK-DSPLDVVV 32 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCS-SCSEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCC-CCCeEEEE
Confidence 58999999999999999998874 23335543
No 418
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=94.62 E-value=0.21 Score=43.80 Aligned_cols=82 Identities=13% Similarity=0.132 Sum_probs=54.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|++++.+.+.+++ .+ ...++.++.+ .+..++++
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~----~v~~~~r~~~~~~~~~~~~-------~~--~~~~~~~~~~D~~~~~~~~~~ 72 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGA----TVVGTATSQASAEKFENSM-------KE--KGFKARGLVLNISDIESIQNF 72 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHH-------HH--TTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------Hh--cCCceEEEEecCCCHHHHHHH
Confidence 34555554 8999999999999994 9999999988776654421 11 1234545444 35677788
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ .... .+=.++|++++
T Consensus 73 ~~~~-~~~~--~~id~li~~Ag 91 (247)
T 3lyl_A 73 FAEI-KAEN--LAIDILVNNAG 91 (247)
T ss_dssp HHHH-HHTT--CCCSEEEECCC
T ss_pred HHHH-HHHc--CCCCEEEECCC
Confidence 8777 5444 33357787754
No 419
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=94.60 E-value=0.21 Score=45.68 Aligned_cols=82 Identities=10% Similarity=0.014 Sum_probs=54.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ...++.++.+ .+..+.++
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~l-------~~--~~~~~~~~~~Dv~d~~~v~~~ 98 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGA----RLVLSDVDQPALEQAVNGL-------RG--QGFDAHGVVCDVRHLDEMVRL 98 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH--TTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHH-------Hh--cCCceEEEEccCCCHHHHHHH
Confidence 45666665 8999999999999994 8999999988877654421 10 1234555544 34567777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|++++
T Consensus 99 ~~~~-~~~~--g~id~lvnnAg 117 (301)
T 3tjr_A 99 ADEA-FRLL--GGVDVVFSNAG 117 (301)
T ss_dssp HHHH-HHHH--SSCSEEEECCC
T ss_pred HHHH-HHhC--CCCCEEEECCC
Confidence 7766 4443 33347787654
No 420
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=94.54 E-value=0.11 Score=46.63 Aligned_cols=77 Identities=19% Similarity=0.139 Sum_probs=47.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|++++...... ...+.++.+ .+..+.++
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~--------------~~~~~~~~~Dv~~~~~v~~~ 89 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGH----RVIISYRTEHASVTELR--------------QAGAVALYGDFSCETGIMAF 89 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTC----CEEEEESSCCHHHHHHH--------------HHTCEEEECCTTSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCChHHHHHHHH--------------hcCCeEEECCCCCHHHHHHH
Confidence 34555554 8999999999999994 89999998765322111 011222222 35567777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|+.++
T Consensus 90 ~~~~-~~~~--g~iD~lv~nAg 108 (260)
T 3gem_A 90 IDLL-KTQT--SSLRAVVHNAS 108 (260)
T ss_dssp HHHH-HHHC--SCCSEEEECCC
T ss_pred HHHH-HHhc--CCCCEEEECCC
Confidence 7776 5444 33347777654
No 421
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=94.54 E-value=0.021 Score=51.92 Aligned_cols=57 Identities=11% Similarity=-0.038 Sum_probs=40.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEe
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLA 131 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIila 131 (341)
|||.|.|+ |-+|+.+++.|++.|+ +|++..|++...+ +. ......+.+..+|.||=+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~----~V~~l~R~~~~~~-~~-----~~~~~~~~l~~~d~vihl 58 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGH----EVTLVSRKPGPGR-IT-----WDELAASGLPSCDAAVNL 58 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSCCTTE-EE-----HHHHHHHCCCSCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCCCcCe-ee-----cchhhHhhccCCCEEEEe
Confidence 78999987 9999999999999994 9999999764321 00 001112345678888743
No 422
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=94.53 E-value=0.13 Score=46.44 Aligned_cols=84 Identities=11% Similarity=0.152 Sum_probs=52.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcC-ChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHH
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAP-SERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLD 138 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r-~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~ 138 (341)
.+++.|.|+ |-+|.++++.|++.|. +|++.+| +++.++.+.+++ +......+.++.+ .+..+.
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~----~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~ 92 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGA----NIVLNGFGAPDEIRTVTDEV--------AGLSSGTVLHHPADMTKPSEIA 92 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC----EEEEECCCCHHHHHHHHHHH--------HTTCSSCEEEECCCTTCHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCChHHHHHHHHHH--------hhccCCcEEEEeCCCCCHHHHH
Confidence 345556664 8999999999999994 9999998 555555443310 0001234445443 356677
Q ss_pred HHHHHhhhcccccCCCcEEEEecC
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.+++++ ...+ .+=.++|+.++
T Consensus 93 ~~~~~~-~~~~--g~iD~lv~nAg 113 (281)
T 3v2h_A 93 DMMAMV-ADRF--GGADILVNNAG 113 (281)
T ss_dssp HHHHHH-HHHT--SSCSEEEECCC
T ss_pred HHHHHH-HHHC--CCCCEEEECCC
Confidence 777776 5544 33347787644
No 423
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=94.53 E-value=0.14 Score=45.44 Aligned_cols=79 Identities=11% Similarity=0.133 Sum_probs=52.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|++++++.+.++++ ..+.++.+ .+..++++
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~D~~~~~~~~~~ 73 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGA----KVVIVDRDKAGAERVAGEIG------------DAALAVAADISKEADVDAA 73 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHC------------TTEEEEECCTTSHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHhC------------CceEEEEecCCCHHHHHHH
Confidence 45666665 7899999999999994 89999999988776654321 23333333 34567777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|++++
T Consensus 74 ~~~~-~~~~--g~id~li~~Ag 92 (261)
T 3n74_A 74 VEAA-LSKF--GKVDILVNNAG 92 (261)
T ss_dssp HHHH-HHHH--SCCCEEEECCC
T ss_pred HHHH-HHhc--CCCCEEEECCc
Confidence 7766 5444 33347777654
No 424
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=94.51 E-value=0.1 Score=46.33 Aligned_cols=84 Identities=17% Similarity=0.220 Sum_probs=53.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhc-CCEEEEee---ChHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKE-AEYVFLAM---KPQYLDS 139 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~-aDvIilaV---~~~~v~~ 139 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|++++++.+.+++ .+.... ..+.++.+ .+..+.+
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~ 76 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGY----RVVLIARSKQNLEKVHDEI-------MRSNKHVQEPIVLPLDITDCTKADT 76 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTC----EEEEEESCHHHHHHHHHHH-------HHHCTTSCCCEEEECCTTCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHH-------HHhccccCcceEEeccCCCHHHHHH
Confidence 34555555 8999999999999994 9999999988877655421 111111 34445444 3566777
Q ss_pred HHHHhhhcccccCCCcEEEEecC
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++++ ...+ .+=.++|+.++
T Consensus 77 ~~~~~-~~~~--g~iD~lvnnAg 96 (250)
T 3nyw_A 77 EIKDI-HQKY--GAVDILVNAAA 96 (250)
T ss_dssp HHHHH-HHHH--CCEEEEEECCC
T ss_pred HHHHH-HHhc--CCCCEEEECCC
Confidence 77776 5444 33347777643
No 425
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=94.50 E-value=0.12 Score=41.33 Aligned_cols=76 Identities=21% Similarity=0.115 Sum_probs=47.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEE-EEcCChhhhhhcCcCCCc-cc--cChHHHhh--cCCEEEEeeCh---
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQII-ASAPSERFKLHWPEPMDF-AL--NDNHRIIK--EAEYVFLAMKP--- 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~-v~~r~~e~~~~l~~~~g~-~~--~s~~e~~~--~aDvIilaV~~--- 134 (341)
.+++.|||+|..|..+++.|.+.. .+++. +++.++++..... .|+ +. .+..+.++ ..|.||+|+|.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~---g~~vvg~~d~~~~~~g~~i--~g~pV~g~~~l~~~~~~~~id~viia~~~~~~ 78 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGK---EFHPIAFIDDDRKKHKTTM--QGITIYRPKYLERLIKKHCISTVLLAVPSASQ 78 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSS---SEEEEEEECSCGGGTTCEE--TTEEEECGGGHHHHHHHHTCCEEEECCTTSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CcEEEEEEECCcccCCCEe--cCeEEECHHHHHHHHHHCCCCEEEEeCCCCCH
Confidence 357999999999999999998752 24654 5676655432211 244 32 33444443 57889999874
Q ss_pred HHHHHHHHHh
Q psy316 135 QYLDSAIQGL 144 (341)
Q Consensus 135 ~~v~~vl~~i 144 (341)
....+++..+
T Consensus 79 ~~~~~i~~~l 88 (141)
T 3nkl_A 79 VQKKVIIESL 88 (141)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 2345555544
No 426
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=94.49 E-value=0.023 Score=56.68 Aligned_cols=44 Identities=23% Similarity=0.296 Sum_probs=36.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM 111 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~ 111 (341)
.+++.|+|+|.+|.+++..|.+.|. +|++++|++++++.+.+++
T Consensus 364 ~k~vlV~GaGGig~aia~~L~~~G~----~V~i~~R~~~~a~~la~~~ 407 (523)
T 2o7s_A 364 SKTVVVIGAGGAGKALAYGAKEKGA----KVVIANRTYERALELAEAI 407 (523)
T ss_dssp --CEEEECCSHHHHHHHHHHHHHCC-----CEEEESSHHHHHHHHHHT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHc
Confidence 3578999999999999999999994 8999999999888776544
No 427
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=94.49 E-value=0.18 Score=44.83 Aligned_cols=83 Identities=11% Similarity=0.146 Sum_probs=53.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|. +|++.+|++++++.+.++ ..+ ....++.++.+ .+..+.++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~D~~~~~~~~~~ 75 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGA----HIVLVARQVDRLHEAARS-------LKE-KFGVRVLEVAVDVATPEGVDAV 75 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHH-------HHH-HHCCCEEEEECCTTSHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHH-------HHH-hcCCceEEEEcCCCCHHHHHHH
Confidence 45666665 9999999999999994 999999998776654332 111 00234555443 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|++++
T Consensus 76 ~~~~-~~~~--g~id~lv~~Ag 94 (263)
T 3ai3_A 76 VESV-RSSF--GGADILVNNAG 94 (263)
T ss_dssp HHHH-HHHH--SSCSEEEECCC
T ss_pred HHHH-HHHc--CCCCEEEECCC
Confidence 7766 4444 33347787754
No 428
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=94.48 E-value=0.047 Score=47.67 Aligned_cols=66 Identities=12% Similarity=0.170 Sum_probs=45.2
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--------cccChHHHhhcCCEEEEeeC
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--------ALNDNHRIIKEAEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--------~~~s~~e~~~~aDvIilaV~ 133 (341)
|+|.|.| .|.+|.++++.|++.|+ ..+|++.+|++++.+.+... ++ ...+..++++..|+||-+.-
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~--~~~V~~~~r~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag 93 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGL--FSKVTLIGRRKLTFDEEAYK-NVNQEVVDFEKLDDYASAFQGHDVGFCCLG 93 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTC--CSEEEEEESSCCCCCSGGGG-GCEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCC--CCEEEEEEcCCCCccccccC-CceEEecCcCCHHHHHHHhcCCCEEEECCC
Confidence 6799998 59999999999999982 12899999987655432211 11 11223445667898888764
No 429
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=94.43 E-value=0.078 Score=48.70 Aligned_cols=64 Identities=13% Similarity=0.183 Sum_probs=46.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc-CCCCCCeEEEEcCChhhhhhcCcCCCc--c---ccC----hHHHhhcCCEEEEee
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRT-GLCIPAQIIASAPSERFKLHWPEPMDF--A---LND----NHRIIKEAEYVFLAM 132 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~-G~~~~~~V~v~~r~~e~~~~l~~~~g~--~---~~s----~~e~~~~aDvIilaV 132 (341)
|+|.|.|+ |.+|+.+++.|++. | ++|++.+|++++.+.+....++ . ..+ ..++++.+|+||-+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A 75 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH----YEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV 75 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT----CEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC----CEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence 57999987 99999999999998 6 4999999988776654332232 1 112 234567899999763
No 430
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=94.40 E-value=0.17 Score=45.79 Aligned_cols=91 Identities=11% Similarity=0.092 Sum_probs=55.5
Q ss_pred CCCe-EEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MWTK-VGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~~k-IgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
|..| +.|.|+ |-+|.++++.|++.|. +|++.+|++++.+.+.++..-......+ ...++.++.+ .+..+
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v 80 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA----NVALVAKSAEPHPKLPGTIYTAAKEIEE--AGGQALPIVGDIRDGDAV 80 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC----EEEEEESCCSCCSSSCCCHHHHHHHHHH--HTSEEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEECChhhhhhhhHHHHHHHHHHHh--cCCcEEEEECCCCCHHHH
Confidence 4444 455554 8999999999999994 9999999987665554321001111111 1345555554 35677
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.++++++ ...+ .+=.++|++++
T Consensus 81 ~~~~~~~-~~~~--g~id~lvnnAg 102 (285)
T 3sc4_A 81 AAAVAKT-VEQF--GGIDICVNNAS 102 (285)
T ss_dssp HHHHHHH-HHHH--SCCSEEEECCC
T ss_pred HHHHHHH-HHHc--CCCCEEEECCC
Confidence 7788776 5544 33347787654
No 431
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=94.37 E-value=0.2 Score=45.22 Aligned_cols=81 Identities=10% Similarity=0.073 Sum_probs=50.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|. +|++.+|++++++.+.+++. ...++.++.+ .+..+..+
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~----~V~~~~r~~~~~~~~~~~l~----------~~~~~~~~~~Dv~d~~~v~~~ 95 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGA----RVFICARDAEACADTATRLS----------AYGDCQAIPADLSSEAGARRL 95 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHHHHT----------TSSCEEECCCCTTSHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHH----------hcCceEEEEeeCCCHHHHHHH
Confidence 44556665 8999999999999994 89999999877665433210 0012333322 34567777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|++++
T Consensus 96 ~~~~-~~~~--g~iD~lvnnAg 114 (276)
T 2b4q_A 96 AQAL-GELS--ARLDILVNNAG 114 (276)
T ss_dssp HHHH-HHHC--SCCSEEEECCC
T ss_pred HHHH-HHhc--CCCCEEEECCC
Confidence 7766 4443 33347777644
No 432
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=94.35 E-value=0.14 Score=46.30 Aligned_cols=78 Identities=12% Similarity=0.012 Sum_probs=52.3
Q ss_pred eEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHHH
Q psy316 66 KVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSAI 141 (341)
Q Consensus 66 kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~vl 141 (341)
++.|.| .|-+|.++++.|++.|. +|++.+|++++++.+.+++ ...+.++.+ .+..+..++
T Consensus 7 ~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v~~~~ 70 (281)
T 3zv4_A 7 VALITGGASGLGRALVDRFVAEGA----RVAVLDKSAERLRELEVAH------------GGNAVGVVGDVRSLQDQKRAA 70 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHT------------BTTEEEEECCTTCHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcC----EEEEEeCCHHHHHHHHHHc------------CCcEEEEEcCCCCHHHHHHHH
Confidence 445555 58999999999999994 9999999988877654432 123444443 356677777
Q ss_pred HHhhhcccccCCCcEEEEecC
Q psy316 142 QGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++ ...+ .+=.++|+.++
T Consensus 71 ~~~-~~~~--g~iD~lvnnAg 88 (281)
T 3zv4_A 71 ERC-LAAF--GKIDTLIPNAG 88 (281)
T ss_dssp HHH-HHHH--SCCCEEECCCC
T ss_pred HHH-HHhc--CCCCEEEECCC
Confidence 776 5444 33357787644
No 433
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=94.32 E-value=0.15 Score=45.52 Aligned_cols=82 Identities=11% Similarity=0.048 Sum_probs=53.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.| .|-+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ....+.++.+ .+..+..+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~--~~~~~~~~~~D~~~~~~v~~~ 96 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGA----RVVLTARDVEKLRAVEREI-------VA--AGGEAESHACDLSHSDAIAAF 96 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH--TTCEEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHH-------HH--hCCceeEEEecCCCHHHHHHH
Confidence 4455566 49999999999999994 8999999988876654421 11 1233444443 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.+||++++
T Consensus 97 ~~~~-~~~~--g~id~lv~~Ag 115 (262)
T 3rkr_A 97 ATGV-LAAH--GRCDVLVNNAG 115 (262)
T ss_dssp HHHH-HHHH--SCCSEEEECCC
T ss_pred HHHH-HHhc--CCCCEEEECCC
Confidence 7776 5444 33347787654
No 434
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=94.32 E-value=0.16 Score=45.82 Aligned_cols=81 Identities=10% Similarity=0.144 Sum_probs=53.0
Q ss_pred CCCeE-EEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MWTKV-GFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~~kI-giIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
+..|+ .|.| .|-+|.++++.|++.|. +|++.+|++++++.+.+++ ...+.++.+ .+..+
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~Dv~d~~~v 88 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGA----YVVVADVNEDAAVRVANEI------------GSKAFGVRVDVSSAKDA 88 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHH------------CTTEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHh------------CCceEEEEecCCCHHHH
Confidence 44444 4555 48999999999999994 9999999988776654421 123333333 35667
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+.+++++ ...+ .+=.++|++++
T Consensus 89 ~~~~~~~-~~~~--g~iD~lv~nAg 110 (277)
T 4dqx_A 89 ESMVEKT-TAKW--GRVDVLVNNAG 110 (277)
T ss_dssp HHHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHHH-HHHc--CCCCEEEECCC
Confidence 7777766 4444 33347787654
No 435
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=94.30 E-value=0.2 Score=44.82 Aligned_cols=85 Identities=9% Similarity=0.087 Sum_probs=55.3
Q ss_pred CCCeEEEE-c-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MWTKVGFI-G-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~~kIgiI-G-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
+..|+.+| | .|-+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ....++.++.+ .+..+
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~l-------~~-~~~~~~~~~~~Dv~~~~~v 85 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGA----RLVLSGRDVSELDAARRAL-------GE-QFGTDVHTVAIDLAEPDAP 85 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH-HHCCCEEEEECCTTSTTHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------HH-hcCCcEEEEEecCCCHHHH
Confidence 33345544 5 58999999999999995 8999999988877654421 11 11345555554 34567
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
..+++++ ...+ .+=.++|+.++
T Consensus 86 ~~~~~~~-~~~~--g~id~lv~nAg 107 (266)
T 4egf_A 86 AELARRA-AEAF--GGLDVLVNNAG 107 (266)
T ss_dssp HHHHHHH-HHHH--TSCSEEEEECC
T ss_pred HHHHHHH-HHHc--CCCCEEEECCC
Confidence 7777776 5544 33357887754
No 436
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=94.29 E-value=0.18 Score=45.33 Aligned_cols=84 Identities=13% Similarity=0.101 Sum_probs=54.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHH
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLD 138 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~ 138 (341)
+.+++.|.|+ |-+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ...++.++.+ .+..+.
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~l-------~~--~~~~~~~~~~Dv~d~~~v~ 69 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA----KILLGARRQARIEAIATEI-------RD--AGGTALAQVLDVTDRHSVA 69 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHH-------HH--TTCEEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHH-------Hh--cCCcEEEEEcCCCCHHHHH
Confidence 3445666665 8999999999999994 8999999988877654421 11 1233444443 356677
Q ss_pred HHHHHhhhcccccCCCcEEEEecC
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.+++++ ...+ .+=.++|++++
T Consensus 70 ~~~~~~-~~~~--g~iD~lVnnAG 90 (264)
T 3tfo_A 70 AFAQAA-VDTW--GRIDVLVNNAG 90 (264)
T ss_dssp HHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHH-HHHc--CCCCEEEECCC
Confidence 777776 5444 33347787644
No 437
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=94.28 E-value=0.25 Score=44.16 Aligned_cols=81 Identities=11% Similarity=0.091 Sum_probs=50.8
Q ss_pred eEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEE-cCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 66 KVGFIG-AGNMAQAVATSLIRTGLCIPAQIIAS-APSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 66 kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~-~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
++.|.| .|.+|.++++.|++.|. +|++. .|+++..+.+.+++ .+ ...++.++.+ .+..+..+
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~----~V~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~Dl~~~~~v~~~ 94 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGW----RVGVNYAANREAADAVVAAI-------TE--SGGEAVAIPGDVGNAADIAAM 94 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHH-------HH--TTCEEEEEECCTTCHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCC----EEEEEcCCChhHHHHHHHHH-------Hh--cCCcEEEEEcCCCCHHHHHHH
Confidence 444555 59999999999999995 78664 88887766554320 11 1234444444 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.+||++++
T Consensus 95 ~~~~-~~~~--g~id~li~nAg 113 (272)
T 4e3z_A 95 FSAV-DRQF--GRLDGLVNNAG 113 (272)
T ss_dssp HHHH-HHHH--SCCCEEEECCC
T ss_pred HHHH-HHhC--CCCCEEEECCC
Confidence 7776 5444 33347777654
No 438
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=94.28 E-value=0.12 Score=46.15 Aligned_cols=85 Identities=12% Similarity=0.138 Sum_probs=52.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|+ +|++.+|++++.+.+.+++. +......+.++.+ .+..+..+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~-------~~~~~~~~~~~~~D~~~~~~v~~~ 76 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGA----KVALVDWNLEAGVQCKAALH-------EQFEPQKTLFIQCDVADQQQLRDT 76 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHT-------TTSCGGGEEEEECCTTSHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHH-------hhcCCCceEEEecCCCCHHHHHHH
Confidence 45667765 8999999999999994 99999999877654322110 0000112333333 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecCC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~ag 163 (341)
++++ ...+ .+=.++|++++.
T Consensus 77 ~~~~-~~~~--g~id~lv~~Ag~ 96 (267)
T 2gdz_A 77 FRKV-VDHF--GRLDILVNNAGV 96 (267)
T ss_dssp HHHH-HHHH--SCCCEEEECCCC
T ss_pred HHHH-HHHc--CCCCEEEECCCC
Confidence 7776 5444 333578877543
No 439
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=94.28 E-value=0.19 Score=45.20 Aligned_cols=84 Identities=10% Similarity=0.054 Sum_probs=58.4
Q ss_pred CCCeEEEE--cccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MWTKVGFI--GAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~~kIgiI--G~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
++=|+.+| |.+-||.++++.|.+.|. +|.+++|++++++.+.+++ .+ ...+++++.+ .++++
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga----~Vv~~~~~~~~~~~~~~~i-------~~--~g~~~~~~~~Dvt~~~~v 71 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS----IVVAVELLEDRLNQIVQEL-------RG--MGKEVLGVKADVSKKKDV 71 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH--TTCCEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC----EEEEEECCHHHHHHHHHHH-------Hh--cCCcEEEEEccCCCHHHH
Confidence 44577777 557899999999999995 9999999998887765531 11 1234555554 46778
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+.+++++ ...+ .+=.++|+.++
T Consensus 72 ~~~~~~~-~~~~--G~iDiLVNNAG 93 (254)
T 4fn4_A 72 EEFVRRT-FETY--SRIDVLCNNAG 93 (254)
T ss_dssp HHHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHHH-HHHc--CCCCEEEECCc
Confidence 8888877 5555 33357887654
No 440
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.28 E-value=0.12 Score=45.12 Aligned_cols=83 Identities=13% Similarity=0.175 Sum_probs=52.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|. +|++.+|++++++.+.+++ .+ .....+.++.+ .+..+.++
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~-~~~~~~~~~~~D~~~~~~v~~~ 70 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGY----ALALGARSVDRLEKIAHEL-------MQ-EQGVEVFYHHLDVSKAESVEEF 70 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH-HHCCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------Hh-hcCCeEEEEEeccCCHHHHHHH
Confidence 34566665 8899999999999994 8999999988877654421 10 11345555554 35566666
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|+.++
T Consensus 71 ~~~~-~~~~--g~id~li~~Ag 89 (235)
T 3l77_A 71 SKKV-LERF--GDVDVVVANAG 89 (235)
T ss_dssp CC-H-HHHH--SSCSEEEECCC
T ss_pred HHHH-HHhc--CCCCEEEECCc
Confidence 6665 4433 33347777643
No 441
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=94.23 E-value=0.18 Score=44.62 Aligned_cols=84 Identities=12% Similarity=0.148 Sum_probs=53.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHH
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLD 138 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~ 138 (341)
|.+++.|.|+ |.+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ....+.++.+ .+..+.
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~--~~~~~~~~~~D~~~~~~v~ 67 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLVKDGF----AVAIADYNDATAKAVASEI-------NQ--AGGHAVAVKVDVSDRDQVF 67 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH--TTCCEEEEECCTTSHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------Hh--cCCcEEEEEecCCCHHHHH
Confidence 4456777765 8999999999999994 8999999987766543321 00 0123444433 345677
Q ss_pred HHHHHhhhcccccCCCcEEEEecC
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++++ ...+ .+=.++|+.++
T Consensus 68 ~~~~~~-~~~~--g~id~lv~nAg 88 (256)
T 1geg_A 68 AAVEQA-RKTL--GGFDVIVNNAG 88 (256)
T ss_dssp HHHHHH-HHHT--TCCCEEEECCC
T ss_pred HHHHHH-HHHh--CCCCEEEECCC
Confidence 777766 4444 33347777643
No 442
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=94.23 E-value=0.036 Score=49.82 Aligned_cols=58 Identities=12% Similarity=0.158 Sum_probs=41.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhh--cCCEEEEee
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIK--EAEYVFLAM 132 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~--~aDvIilaV 132 (341)
|+|||.|.|+ |.+|+.+++.|++.| ++|++.+|.+-. +. ...+..++++ .+|+||-+.
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~D---~~-----d~~~~~~~~~~~~~d~vi~~a 64 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEE----YDIYPFDKKLLD---IT-----NISQVQQVVQEIRPHIIIHCA 64 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTT----EEEEEECTTTSC---TT-----CHHHHHHHHHHHCCSEEEECC
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCC----CEEEEecccccC---CC-----CHHHHHHHHHhcCCCEEEECC
Confidence 7779999985 999999999999988 499999983211 11 1123344555 599999764
No 443
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.22 E-value=0.11 Score=49.19 Aligned_cols=35 Identities=26% Similarity=0.438 Sum_probs=31.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCCh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSE 101 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~ 101 (341)
..+|.|||+|.+|+.++..|..+|. .+++++|++.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGv---g~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGI---GEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC---SEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---CeEEEECCCc
Confidence 5689999999999999999999996 6899999864
No 444
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.22 E-value=0.11 Score=44.20 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=36.6
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc
Q psy316 64 WTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF 113 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~ 113 (341)
.++|.|+| +|.+|.++++.+...|. +|++++|++++.+.+++ +|.
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~----~V~~~~~~~~~~~~~~~-~g~ 84 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGA----RIYTTAGSDAKREMLSR-LGV 84 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTC----EEEEEESSHHHHHHHHT-TCC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCC----EEEEEeCCHHHHHHHHH-cCC
Confidence 46799999 69999999999988884 89999999888766644 453
No 445
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=94.20 E-value=0.25 Score=43.06 Aligned_cols=83 Identities=13% Similarity=0.113 Sum_probs=52.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|+ +|++.+|++++.+.+.++ ..+ ....++.++.. .+..+.++
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~-------~~~-~~~~~~~~~~~D~~~~~~~~~~ 75 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGS----TVIITGTSGERAKAVAEE-------IAN-KYGVKAHGVEMNLLSEESINKA 75 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHH-------HHH-HHCCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----EEEEEeCChHHHHHHHHH-------HHh-hcCCceEEEEccCCCHHHHHHH
Confidence 34556654 9999999999999994 999999998776654331 000 01234444443 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.+||++++
T Consensus 76 ~~~~-~~~~--~~~d~vi~~Ag 94 (248)
T 2pnf_A 76 FEEI-YNLV--DGIDILVNNAG 94 (248)
T ss_dssp HHHH-HHHS--SCCSEEEECCC
T ss_pred HHHH-HHhc--CCCCEEEECCC
Confidence 7766 5444 33357787654
No 446
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.18 E-value=0.13 Score=45.46 Aligned_cols=77 Identities=13% Similarity=0.124 Sum_probs=50.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|+ +|++.+|++++++.+.++.++ .++.+ .+..+.++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~--------------~~~~~D~~~~~~~~~~ 67 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGA----RLVACDIEEGPLREAAEAVGA--------------HPVVMDVADPASVERG 67 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHTTTC--------------EEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHcCC--------------EEEEecCCCHHHHHHH
Confidence 45666665 8999999999999994 999999998877665443221 11111 34566666
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|++++
T Consensus 68 ~~~~-~~~~--g~id~lvn~Ag 86 (245)
T 1uls_A 68 FAEA-LAHL--GRLDGVVHYAG 86 (245)
T ss_dssp HHHH-HHHH--SSCCEEEECCC
T ss_pred HHHH-HHHc--CCCCEEEECCC
Confidence 6665 4433 33347777643
No 447
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.16 E-value=0.29 Score=43.65 Aligned_cols=83 Identities=7% Similarity=0.046 Sum_probs=55.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ...++.++.+ .+..+.++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~--~~~~~~~~~~Dv~~~~~v~~~ 78 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGA----DLVLAARTVERLEDVAKQV-------TD--TGRRALSVGTDITDDAQVAHL 78 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH--TTCCEEEEECCTTCHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcC----EEEEEeCCHHHHHHHHHHH-------Hh--cCCcEEEEEcCCCCHHHHHHH
Confidence 44555665 7899999999999995 8999999988877654421 11 1234555554 35677777
Q ss_pred HHHhhhcccccCCCcEEEEecCC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~ag 163 (341)
++++ ...+ .+=.++|++++.
T Consensus 79 ~~~~-~~~~--g~id~lv~nAg~ 98 (264)
T 3ucx_A 79 VDET-MKAY--GRVDVVINNAFR 98 (264)
T ss_dssp HHHH-HHHT--SCCSEEEECCCS
T ss_pred HHHH-HHHc--CCCcEEEECCCC
Confidence 7776 5544 333578877543
No 448
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=94.16 E-value=0.22 Score=45.42 Aligned_cols=81 Identities=16% Similarity=0.197 Sum_probs=51.0
Q ss_pred CeEEEEccc---HHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHH
Q psy316 65 TKVGFIGAG---NMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLD 138 (341)
Q Consensus 65 ~kIgiIG~G---~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~ 138 (341)
+++.|.|++ -+|.++++.|++.|. +|++.+|+++..+.+.+. .+... .+.++.+ .+..++
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~----~V~~~~r~~~~~~~~~~~--------~~~~~--~~~~~~~Dv~d~~~v~ 96 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGA----EVALTYLSETFKKRVDPL--------AESLG--VKLTVPCDVSDAESVD 96 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTC----EEEEEESSGGGHHHHHHH--------HHHHT--CCEEEECCTTCHHHHH
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCC----EEEEEeCChHHHHHHHHH--------HHhcC--CeEEEEcCCCCHHHHH
Confidence 456667875 899999999999995 899999986544333220 11111 2233333 356778
Q ss_pred HHHHHhhhcccccCCCcEEEEecC
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.+++++ ...+ .+=.++|++++
T Consensus 97 ~~~~~~-~~~~--g~iD~lVnnAG 117 (296)
T 3k31_A 97 NMFKVL-AEEW--GSLDFVVHAVA 117 (296)
T ss_dssp HHHHHH-HHHH--SCCSEEEECCC
T ss_pred HHHHHH-HHHc--CCCCEEEECCC
Confidence 888777 5544 33357887754
No 449
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=94.15 E-value=0.22 Score=44.17 Aligned_cols=84 Identities=14% Similarity=0.238 Sum_probs=54.3
Q ss_pred CCCeEE-EEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MWTKVG-FIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~~kIg-iIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
|..|+. |.| .|-+|.++++.|++.|. +|++.+|++++++.+.+++. . ....+.++.+ .+..+
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~----~-----~~~~~~~~~~Dv~~~~~v 70 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGA----RVVITGRTKEKLEEAKLEIE----Q-----FPGQILTVQMDVRNTDDI 70 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHC----C-----STTCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHH----h-----cCCcEEEEEccCCCHHHH
Confidence 444444 445 48999999999999994 89999999888776543210 0 0123444443 35677
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.++++++ ...+ .+=.++|++++
T Consensus 71 ~~~~~~~-~~~~--g~id~lv~nAg 92 (257)
T 3imf_A 71 QKMIEQI-DEKF--GRIDILINNAA 92 (257)
T ss_dssp HHHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHHH-HHHc--CCCCEEEECCC
Confidence 7777776 5444 33357887754
No 450
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=94.13 E-value=0.11 Score=47.27 Aligned_cols=78 Identities=10% Similarity=0.099 Sum_probs=53.7
Q ss_pred eEEEE--cccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEe---eChHHHHHH
Q psy316 66 KVGFI--GAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLA---MKPQYLDSA 140 (341)
Q Consensus 66 kIgiI--G~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIila---V~~~~v~~v 140 (341)
|+++| |.+-+|.++++.|.+.|. +|.+++|++++++.+.+++| .+.+.+. ..+.+++++
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga----~V~i~~r~~~~l~~~~~~~g------------~~~~~~~~Dv~~~~~v~~~ 93 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGA----RVFITGRRKDVLDAAIAEIG------------GGAVGIQADSANLAELDRL 93 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHC------------TTCEEEECCTTCHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHcC------------CCeEEEEecCCCHHHHHHH
Confidence 68877 457899999999999995 99999999988876655432 1222222 246678888
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|..++
T Consensus 94 ~~~~-~~~~--G~iDiLVNNAG 112 (273)
T 4fgs_A 94 YEKV-KAEA--GRIDVLFVNAG 112 (273)
T ss_dssp HHHH-HHHH--SCEEEEEECCC
T ss_pred HHHH-HHHc--CCCCEEEECCC
Confidence 8777 5544 32246776644
No 451
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=94.12 E-value=0.13 Score=46.47 Aligned_cols=84 Identities=10% Similarity=0.115 Sum_probs=53.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---Ch-HHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KP-QYLDS 139 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~-~~v~~ 139 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|++++.+.+.+++ .+ .....+.++.+ .+ ..+..
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G~----~V~~~~r~~~~~~~~~~~l-------~~-~~~~~~~~~~~Dl~~~~~~v~~ 80 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNGI----MVVLTCRDVTKGHEAVEKL-------KN-SNHENVVFHQLDVTDPIATMSS 80 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HT-TTCCSEEEEECCTTSCHHHHHH
T ss_pred cEEEEecCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------Hh-cCCCceEEEEccCCCcHHHHHH
Confidence 44555565 8999999999999994 9999999988766543321 00 01124555544 23 56777
Q ss_pred HHHHhhhcccccCCCcEEEEecCC
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLVG 163 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~ag 163 (341)
+++.+ ...+ .+=.+||++++.
T Consensus 81 ~~~~~-~~~~--g~iD~lv~nAg~ 101 (311)
T 3o26_A 81 LADFI-KTHF--GKLDILVNNAGV 101 (311)
T ss_dssp HHHHH-HHHH--SSCCEEEECCCC
T ss_pred HHHHH-HHhC--CCCCEEEECCcc
Confidence 77766 5444 333478877543
No 452
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=94.11 E-value=0.17 Score=49.15 Aligned_cols=34 Identities=29% Similarity=0.314 Sum_probs=30.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCC
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPS 100 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~ 100 (341)
..||.|||+|.+|+.++++|..+|. .+|+++|.+
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGv---g~i~ivD~D 73 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGF---RQIHVIDMD 73 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTC---CCEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCC---CEEEEEcCC
Confidence 4689999999999999999999996 689998653
No 453
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=94.10 E-value=0.16 Score=46.88 Aligned_cols=84 Identities=6% Similarity=0.014 Sum_probs=54.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|++++++.+.+++ ...-....+.++.+ .+..+.++
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~----~Vv~~~r~~~~~~~~~~~l-------~~~~~~~~~~~~~~Dl~~~~~v~~~ 77 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGC----KVAIADIRQDSIDKALATL-------EAEGSGPEVMGVQLDVASREGFKMA 77 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HHHTCGGGEEEEECCTTCHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHH-------HhcCCCCeEEEEECCCCCHHHHHHH
Confidence 45667765 8999999999999994 8999999998877654421 11111124444443 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.+||++++
T Consensus 78 ~~~~-~~~~--g~id~lv~nAg 96 (319)
T 3ioy_A 78 ADEV-EARF--GPVSILCNNAG 96 (319)
T ss_dssp HHHH-HHHT--CCEEEEEECCC
T ss_pred HHHH-HHhC--CCCCEEEECCC
Confidence 7776 5444 33347777644
No 454
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=94.10 E-value=0.21 Score=44.94 Aligned_cols=84 Identities=15% Similarity=0.143 Sum_probs=57.5
Q ss_pred CCCeEEEE--cccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MWTKVGFI--GAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~~kIgiI--G~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
.+=|+.+| |.+-+|.++++.|.+.|. +|.+.+|+++++++..+++ .+ ...+++.+.+ .+.++
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga----~Vvi~~~~~~~~~~~~~~l-------~~--~g~~~~~~~~Dv~~~~~v 73 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA----RVILNDIRATLLAESVDTL-------TR--KGYDAHGVAFDVTDELAI 73 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC----EEEECCSCHHHHHHHHHHH-------HH--TTCCEEECCCCTTCHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHH-------Hh--cCCcEEEEEeeCCCHHHH
Confidence 45578888 668999999999999995 9999999988876654321 00 1234444443 46778
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+.+++++ ...+ .+=.++|+.++
T Consensus 74 ~~~~~~~-~~~~--G~iDiLVNNAG 95 (255)
T 4g81_D 74 EAAFSKL-DAEG--IHVDILINNAG 95 (255)
T ss_dssp HHHHHHH-HHTT--CCCCEEEECCC
T ss_pred HHHHHHH-HHHC--CCCcEEEECCC
Confidence 8888887 5544 33347887643
No 455
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=94.09 E-value=0.046 Score=51.32 Aligned_cols=35 Identities=26% Similarity=0.388 Sum_probs=31.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChh
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSER 102 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e 102 (341)
.|||.|||+|.-|..+|..|.++|+ +|+|++|++.
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~----~v~v~Er~~~ 35 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI----KVTIYERNSA 35 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEECSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC----CEEEEecCCC
Confidence 3799999999999999999999995 9999998654
No 456
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=94.07 E-value=0.11 Score=47.86 Aligned_cols=66 Identities=15% Similarity=0.154 Sum_probs=44.4
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhh------hcCcCCCc--------cccChHHHhhcCC
Q psy316 62 PMWTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKL------HWPEPMDF--------ALNDNHRIIKEAE 126 (341)
Q Consensus 62 ~m~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~------~l~~~~g~--------~~~s~~e~~~~aD 126 (341)
+|.++|.|.| +|-+|+.+++.|++.|+ +|++..|++++.+ .+....++ ...+..++++.+|
T Consensus 7 ~~~~~vlVTGatGfIG~~l~~~Ll~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D 82 (338)
T 2rh8_A 7 IGKKTACVVGGTGFVASLLVKLLLQKGY----AVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCD 82 (338)
T ss_dssp --CCEEEEECTTSHHHHHHHHHHHHTTC----EEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCS
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC----EEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCC
Confidence 3678999998 69999999999999994 8988888765321 11110111 1123456777899
Q ss_pred EEEEe
Q psy316 127 YVFLA 131 (341)
Q Consensus 127 vIila 131 (341)
+||-+
T Consensus 83 ~Vih~ 87 (338)
T 2rh8_A 83 FVFHV 87 (338)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99965
No 457
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.06 E-value=0.22 Score=44.57 Aligned_cols=79 Identities=14% Similarity=0.221 Sum_probs=52.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |-+|.++++.|.+.|. +|++.+|++++++.+.++++ .++.++.+ .+..+.++
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~D~~~~~~v~~~ 70 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGA----SLVAVDREERLLAEAVAALE------------AEAIAVVADVSDPKAVEAV 70 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHTCC------------SSEEEEECCTTSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhc------------CceEEEEcCCCCHHHHHHH
Confidence 45666655 8999999999999994 99999999887766544321 23333333 34567777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|++++
T Consensus 71 ~~~~-~~~~--g~iD~lvnnAg 89 (263)
T 2a4k_A 71 FAEA-LEEF--GRLHGVAHFAG 89 (263)
T ss_dssp HHHH-HHHH--SCCCEEEEGGG
T ss_pred HHHH-HHHc--CCCcEEEECCC
Confidence 7666 4444 33347777654
No 458
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=94.05 E-value=0.2 Score=45.14 Aligned_cols=85 Identities=14% Similarity=0.143 Sum_probs=53.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |-+|.++++.|++.|+ +|++.+|++++++.+.++ ..+ ....++.++.+ .+..+.++
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~-------~~~-~~~~~~~~~~~Dl~d~~~v~~~ 96 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGA----HVVVTARSKETLQKVVSH-------CLE-LGAASAHYIAGTMEDMTFAEQF 96 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHH-------HHH-HTCSEEEEEECCTTCHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHH-------HHH-hCCCceEEEeCCCCCHHHHHHH
Confidence 56777776 8999999999999994 899999998877655432 011 11113444433 24566677
Q ss_pred HHHhhhcccccCCCcEEEEecCCC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLVGV 164 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~agi 164 (341)
++++ ...+ .+=.++|++++|+
T Consensus 97 ~~~~-~~~~--g~iD~li~naag~ 117 (286)
T 1xu9_A 97 VAQA-GKLM--GGLDMLILNHITN 117 (286)
T ss_dssp HHHH-HHHH--TSCSEEEECCCCC
T ss_pred HHHH-HHHc--CCCCEEEECCccC
Confidence 7665 4433 3334677664443
No 459
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=94.00 E-value=0.32 Score=45.58 Aligned_cols=87 Identities=14% Similarity=0.143 Sum_probs=54.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhh--cCCEEEEee---ChHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIK--EAEYVFLAM---KPQYLD 138 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~--~aDvIilaV---~~~~v~ 138 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|++++.+.+.+. + ....+.+. ...+.++.+ .+..+.
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga----~Vvl~~r~~~~~~~l~~~--l--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~ 117 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGA----NIVIAAKTAQPHPKLLGT--I--YTAAEEIEAVGGKALPCIVDVRDEQQIS 117 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC----EEEEEESCCSCCSSSCCC--H--HHHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCC----EEEEEECChhhhhhhHHH--H--HHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence 34555555 8999999999999994 999999988766554432 1 01111111 234555544 356777
Q ss_pred HHHHHhhhcccccCCCcEEEEecC
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.+++++ ...+ .+=.+||++++
T Consensus 118 ~~~~~~-~~~~--g~iDilVnnAG 138 (346)
T 3kvo_A 118 AAVEKA-IKKF--GGIDILVNNAS 138 (346)
T ss_dssp HHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHH-HHHc--CCCCEEEECCC
Confidence 888777 5544 33357887754
No 460
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=93.98 E-value=0.19 Score=44.58 Aligned_cols=78 Identities=12% Similarity=0.064 Sum_probs=45.8
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHHH
Q psy316 66 KVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSAI 141 (341)
Q Consensus 66 kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~vl 141 (341)
++.|.|+ |-+|.++++.|++.|. +|++.+|++++.+.+.++++ ..+.++.+ .+..+.+++
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~Dv~~~~~v~~~~ 72 (257)
T 3tpc_A 9 VFIVTGASSGLGAAVTRMLAQEGA----TVLGLDLKPPAGEEPAAELG------------AAVRFRNADVTNEADATAAL 72 (257)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC----EEEEEESSCC------------------------CEEEECCTTCHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCChHHHHHHHHHhC------------CceEEEEccCCCHHHHHHHH
Confidence 4455555 8999999999999994 89999999877665554321 12233332 356677777
Q ss_pred HHhhhcccccCCCcEEEEecC
Q psy316 142 QGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++ ...+ .+=.++|+.++
T Consensus 73 ~~~-~~~~--g~id~lv~nAg 90 (257)
T 3tpc_A 73 AFA-KQEF--GHVHGLVNCAG 90 (257)
T ss_dssp HHH-HHHH--SCCCEEEECCC
T ss_pred HHH-HHHc--CCCCEEEECCC
Confidence 776 5444 33347787654
No 461
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.97 E-value=0.041 Score=54.44 Aligned_cols=66 Identities=18% Similarity=0.308 Sum_probs=48.7
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhcCCCCCCeEEEEcCChh-hhhhcCcCCCc-c-ccChHHHhhcCCEEEEe--eCh
Q psy316 64 WTKVGFIGAGNMAQA-VATSLIRTGLCIPAQIIASAPSER-FKLHWPEPMDF-A-LNDNHRIIKEAEYVFLA--MKP 134 (341)
Q Consensus 64 ~~kIgiIG~G~mG~a-ia~~L~~~G~~~~~~V~v~~r~~e-~~~~l~~~~g~-~-~~s~~e~~~~aDvIila--V~~ 134 (341)
.++|.|||.|..|.+ +|+.|.+.|+ +|+++|+++. ..+.|.+ .|+ . .....+.+..+|+||++ +|+
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~----~V~~~D~~~~~~~~~l~~-~gi~~~~g~~~~~~~~~d~vV~Spgi~~ 93 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGY----QISGSDLAPNSVTQHLTA-LGAQIYFHHRPENVLDASVVVVSTAISA 93 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTC----EEEEECSSCCHHHHHHHH-TTCEEESSCCGGGGTTCSEEEECTTSCT
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCC----eEEEEECCCCHHHHHHHH-CCCEEECCCCHHHcCCCCEEEECCCCCC
Confidence 368999999999985 9999999994 9999997543 3445655 476 2 22333456789999986 565
No 462
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=93.97 E-value=0.35 Score=43.37 Aligned_cols=84 Identities=8% Similarity=0.143 Sum_probs=52.0
Q ss_pred CCCeEEEE-c-ccHHHHHHHHHHHhcCCCCCCeEEEEcC-ChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHH
Q psy316 63 MWTKVGFI-G-AGNMAQAVATSLIRTGLCIPAQIIASAP-SERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQY 136 (341)
Q Consensus 63 m~~kIgiI-G-~G~mG~aia~~L~~~G~~~~~~V~v~~r-~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~ 136 (341)
+..|+.+| | .|-+|.++++.|++.|. +|++.+| +++..+.+.+++ .+ ...++.++.+ .+..
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~----~V~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~D~~d~~~ 92 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGA----KVAVNYASSAGAADEVVAAI-------AA--AGGEAFAVKADVSQESE 92 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHH-------HH--TTCCEEEEECCTTSHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCChHHHHHHHHHH-------Hh--cCCcEEEEECCCCCHHH
Confidence 44455555 5 58999999999999995 8888777 655555443310 00 1234555544 3566
Q ss_pred HHHHHHHhhhcccccCCCcEEEEecC
Q psy316 137 LDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 137 v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
++.+++++ ...+ .+=.++|+.++
T Consensus 93 v~~~~~~~-~~~~--g~id~lv~nAg 115 (269)
T 4dmm_A 93 VEALFAAV-IERW--GRLDVLVNNAG 115 (269)
T ss_dssp HHHHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHHHH-HHHc--CCCCEEEECCC
Confidence 77777776 5444 33357787654
No 463
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=93.96 E-value=0.16 Score=44.41 Aligned_cols=85 Identities=13% Similarity=0.048 Sum_probs=53.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHH
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLD 138 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~ 138 (341)
|.+++.|.|+ |.+|.++++.|++.|+ +|++.+|++++++.+.+++. .. ...++.++.. .+..+.
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~---~~-----~~~~~~~~~~D~~~~~~~~ 68 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGD----RVAALDLSAETLEETARTHW---HA-----YADKVLRVRADVADEGDVN 68 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHS---TT-----TGGGEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHH---Hh-----cCCcEEEEEecCCCHHHHH
Confidence 4466777865 9999999999999994 89999999877665433110 00 0123333332 355677
Q ss_pred HHHHHhhhcccccCCCcEEEEecC
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++++ ...+ .+=.+||++++
T Consensus 69 ~~~~~~-~~~~--~~id~li~~Ag 89 (250)
T 2cfc_A 69 AAIAAT-MEQF--GAIDVLVNNAG 89 (250)
T ss_dssp HHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHH-HHHh--CCCCEEEECCC
Confidence 777766 4444 33347777654
No 464
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=93.96 E-value=0.32 Score=43.11 Aligned_cols=84 Identities=10% Similarity=0.040 Sum_probs=51.7
Q ss_pred CCCe-EEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MWTK-VGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~~k-IgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
|..| +.|.| .|.+|.++++.|++.|+ +|++.+|++++++.+.+++ .+ ...++.++.+ .+..+
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~l-------~~--~~~~~~~~~~D~~~~~~~ 78 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGA----HVVVSSRKQENVDRTVATL-------QG--EGLSVTGTVCHVGKAEDR 78 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH--TTCCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------Hh--cCCceEEEEccCCCHHHH
Confidence 4434 55555 58999999999999994 9999999987765543310 00 1223444333 34566
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
..+++++ ...+ .+=.++|++++
T Consensus 79 ~~~~~~~-~~~~--g~iD~lv~~Ag 100 (260)
T 2zat_A 79 ERLVAMA-VNLH--GGVDILVSNAA 100 (260)
T ss_dssp HHHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHHH-HHHc--CCCCEEEECCC
Confidence 6777665 4434 33347777654
No 465
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.95 E-value=0.23 Score=46.81 Aligned_cols=77 Identities=17% Similarity=0.238 Sum_probs=54.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-c-c------cChHHHhh-----cCCEEEE
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-A-L------NDNHRIIK-----EAEYVFL 130 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-~-~------~s~~e~~~-----~aDvIil 130 (341)
..+|.|+|+|.+|...++.+...|. .+|++.++++++++.+++ +|+ . . .+..+.+. ..|+||-
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga---~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid 269 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGA---SRIIGIDIDSKKYETAKK-FGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFE 269 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTC---SCEEEECSCTTHHHHHHT-TTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---CeEEEEcCCHHHHHHHHH-cCCcEEEccccCchhHHHHHHHhcCCCCCEEEE
Confidence 4689999999999998888877773 479999999999886655 776 2 1 12222222 4799999
Q ss_pred eeCh-HHHHHHHHHh
Q psy316 131 AMKP-QYLDSAIQGL 144 (341)
Q Consensus 131 aV~~-~~v~~vl~~i 144 (341)
++.. ..+...++-+
T Consensus 270 ~~g~~~~~~~~~~~l 284 (378)
T 3uko_A 270 CIGNVSVMRAALECC 284 (378)
T ss_dssp CSCCHHHHHHHHHTB
T ss_pred CCCCHHHHHHHHHHh
Confidence 8875 4555555443
No 466
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.93 E-value=0.21 Score=46.76 Aligned_cols=77 Identities=17% Similarity=0.117 Sum_probs=53.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--ccc-C---hHH---Hh-----hcCCEEE
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALN-D---NHR---II-----KEAEYVF 129 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~-s---~~e---~~-----~~aDvIi 129 (341)
..+|.|+|+|.+|...++.+...|. .+|++.++++++++.+++ +|. ..+ + ..+ .+ ...|+||
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga---~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vi 247 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGA---AQVVVTDLSATRLSKAKE-IGADLVLQISKESPQEIARKVEGQLGCKPEVTI 247 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---SEEEEEESCHHHHHHHHH-TTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---CEEEEECCCHHHHHHHHH-hCCCEEEcCcccccchHHHHHHHHhCCCCCEEE
Confidence 3589999999999998887777773 489999999988877665 676 221 1 122 11 2489999
Q ss_pred EeeCh-HHHHHHHHHh
Q psy316 130 LAMKP-QYLDSAIQGL 144 (341)
Q Consensus 130 laV~~-~~v~~vl~~i 144 (341)
-++.. ..+...++-+
T Consensus 248 d~~g~~~~~~~~~~~l 263 (356)
T 1pl8_A 248 ECTGAEASIQAGIYAT 263 (356)
T ss_dssp ECSCCHHHHHHHHHHS
T ss_pred ECCCChHHHHHHHHHh
Confidence 99964 4555555444
No 467
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=93.93 E-value=0.057 Score=53.46 Aligned_cols=62 Identities=18% Similarity=0.146 Sum_probs=45.7
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee
Q psy316 64 WTKVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 64 ~~kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV 132 (341)
+|||.|.| +|.+|+.+++.|++.|+ +|++.+|++.+.+.+.-. ......+.+..+|+||-+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~----~V~~l~R~~~~~~~v~~d---~~~~~~~~l~~~D~Vih~A 209 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH----EVIQLVRKEPKPGKRFWD---PLNPASDLLDGADVLVHLA 209 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESSSCCTTCEECC---TTSCCTTTTTTCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCCCCccceeec---ccchhHHhcCCCCEEEECC
Confidence 36899998 59999999999999984 999999987654332111 1223345667899999764
No 468
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=93.88 E-value=0.11 Score=47.90 Aligned_cols=65 Identities=14% Similarity=0.201 Sum_probs=44.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCC-Cc-----cccC---hHHHhh--cCCEEEEe
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPM-DF-----ALND---NHRIIK--EAEYVFLA 131 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~-g~-----~~~s---~~e~~~--~aDvIila 131 (341)
.|+|.|.|+ |-+|+.+++.|++.|+ +|++.+|++.....+.+++ ++ -..+ ..++++ .+|+||-+
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 95 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGH----EILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHS 95 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTC----EEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEEC
Confidence 468999987 9999999999999984 9999999654332211111 22 1122 334566 89999987
Q ss_pred e
Q psy316 132 M 132 (341)
Q Consensus 132 V 132 (341)
.
T Consensus 96 A 96 (330)
T 2pzm_A 96 A 96 (330)
T ss_dssp C
T ss_pred C
Confidence 6
No 469
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=93.88 E-value=0.43 Score=43.08 Aligned_cols=83 Identities=11% Similarity=0.098 Sum_probs=54.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|+ +|++.+|++++++.+.++ ..+ ....++.++.+ .+..+..+
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~----~V~~~~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~Dl~~~~~~~~~ 94 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGA----QCVIASRKMDVLKATAEQ-------ISS-QTGNKVHAIQCDVRDPDMVQNT 94 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHH-------HHH-HHSSCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHH-------HHH-hcCCceEEEEeCCCCHHHHHHH
Confidence 56777765 8999999999999994 899999998776654332 111 01234555444 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.+||++++
T Consensus 95 ~~~~-~~~~--g~id~li~~Ag 113 (302)
T 1w6u_A 95 VSEL-IKVA--GHPNIVINNAA 113 (302)
T ss_dssp HHHH-HHHT--CSCSEEEECCC
T ss_pred HHHH-HHHc--CCCCEEEECCC
Confidence 7776 4444 33357887754
No 470
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=93.86 E-value=0.21 Score=44.73 Aligned_cols=79 Identities=10% Similarity=0.092 Sum_probs=50.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |-+|.++++.|++.|+ +|++.+|++++++.+.++++ ..+.++.+ .+..+..+
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~Dv~~~~~~~~~ 69 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGD----TVIGTARRTEALDDLVAAYP------------DRAEAISLDVTDGERIDVV 69 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSGGGGHHHHHHCT------------TTEEEEECCTTCHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHhcc------------CCceEEEeeCCCHHHHHHH
Confidence 44555555 9999999999999994 99999999877665543221 12333332 34566666
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.+||++++
T Consensus 70 ~~~~-~~~~--g~id~lv~~Ag 88 (281)
T 3m1a_A 70 AADV-LARY--GRVDVLVNNAG 88 (281)
T ss_dssp HHHH-HHHH--SCCSEEEECCC
T ss_pred HHHH-HHhC--CCCCEEEECCC
Confidence 6665 4433 23346776644
No 471
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=93.86 E-value=0.23 Score=44.19 Aligned_cols=79 Identities=13% Similarity=0.069 Sum_probs=52.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |-+|.++++.|++.|. +|++.+|++++++.+.++++ .++.++.+ .+..+..+
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~Dv~~~~~v~~~ 72 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGA----EVLLTGRNESNIARIREEFG------------PRVHALRSDIADLNEIAVL 72 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHG------------GGEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhC------------CcceEEEccCCCHHHHHHH
Confidence 45556655 8999999999999994 99999999888776554321 23333333 35567777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|+.++
T Consensus 73 ~~~~-~~~~--g~id~lv~nAg 91 (255)
T 4eso_A 73 GAAA-GQTL--GAIDLLHINAG 91 (255)
T ss_dssp HHHH-HHHH--SSEEEEEECCC
T ss_pred HHHH-HHHh--CCCCEEEECCC
Confidence 7766 5444 33346776643
No 472
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=93.84 E-value=0.1 Score=49.10 Aligned_cols=64 Identities=22% Similarity=0.172 Sum_probs=45.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-----cccC---hHHHhhcCCEEEEee
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-----ALND---NHRIIKEAEYVFLAM 132 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-----~~~s---~~e~~~~aDvIilaV 132 (341)
+|+|.|.|+ |.+|+.+++.|++.|+ +|++.+|++.+...... .++ -..+ ..++++.+|+||-+.
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A 101 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH----YVIASDWKKNEHMTEDM-FCDEFHLVDLRVMENCLKVTEGVDHVFNLA 101 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSCCSSSCGGG-TCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC----eEEEEECCCccchhhcc-CCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence 468999987 9999999999999984 99999998655432221 122 1122 345567899999775
No 473
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=93.84 E-value=0.076 Score=49.58 Aligned_cols=66 Identities=12% Similarity=0.155 Sum_probs=47.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhc-CCCCCCeEEEEcCChhhhhhcCcC---CCc-----cccC---hHHHhhcCCEEEE
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRT-GLCIPAQIIASAPSERFKLHWPEP---MDF-----ALND---NHRIIKEAEYVFL 130 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~-G~~~~~~V~v~~r~~e~~~~l~~~---~g~-----~~~s---~~e~~~~aDvIil 130 (341)
.++|.|.|+ |.+|+.+++.|++. |. ++|++++|++.+.+.+.++ .++ -..+ ..++++..|+||-
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~---~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNA---KKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCC---SEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCC---CEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 478999985 99999999999998 83 4899999998766543321 122 1122 2345668999997
Q ss_pred ee
Q psy316 131 AM 132 (341)
Q Consensus 131 aV 132 (341)
+.
T Consensus 98 ~A 99 (344)
T 2gn4_A 98 AA 99 (344)
T ss_dssp CC
T ss_pred CC
Confidence 76
No 474
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=93.84 E-value=0.044 Score=49.73 Aligned_cols=65 Identities=20% Similarity=0.239 Sum_probs=44.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhc--CCCCCCeEEEEcCChhhhhhcCcCCCc---cccC---hHHHhh--cCCEEEEe
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRT--GLCIPAQIIASAPSERFKLHWPEPMDF---ALND---NHRIIK--EAEYVFLA 131 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~--G~~~~~~V~v~~r~~e~~~~l~~~~g~---~~~s---~~e~~~--~aDvIila 131 (341)
|.|+|.|.|+ |.+|+.+++.|++. | ++|++.+|++.+.+ +...... -..+ ..++++ .+|+||-+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g----~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~ 75 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGT----ENVIASDIRKLNTD-VVNSGPFEVVNALDFNQIEHLVEVHKITDIYLM 75 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCG----GGEEEEESCCCSCH-HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCC----CEEEEEcCCCcccc-ccCCCceEEecCCCHHHHHHHHhhcCCCEEEEC
Confidence 5688999987 99999999999998 7 48999988765422 1111111 1122 334555 78999977
Q ss_pred e
Q psy316 132 M 132 (341)
Q Consensus 132 V 132 (341)
.
T Consensus 76 a 76 (312)
T 2yy7_A 76 A 76 (312)
T ss_dssp C
T ss_pred C
Confidence 5
No 475
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=93.82 E-value=0.042 Score=49.30 Aligned_cols=64 Identities=16% Similarity=0.222 Sum_probs=46.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc--CCCCCCeEEEEcCChhhhhhcCcCCCc-----cccC---hHHHhhcCCEEEEeeC
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRT--GLCIPAQIIASAPSERFKLHWPEPMDF-----ALND---NHRIIKEAEYVFLAMK 133 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~--G~~~~~~V~v~~r~~e~~~~l~~~~g~-----~~~s---~~e~~~~aDvIilaV~ 133 (341)
|+|.|.|+ |.+|+.+++.|++. | ++|++.+|++++.+.+.. .++ -..+ ..++++.+|+||-+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g----~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA----SQIIAIVRNVEKASTLAD-QGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG----GGEEEEESCTTTTHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC----CeEEEEEcCHHHHhHHhh-cCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 57899987 99999999999987 7 599999998776654433 132 1122 3455678999997764
No 476
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=93.82 E-value=0.02 Score=51.12 Aligned_cols=62 Identities=18% Similarity=0.171 Sum_probs=44.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc-----cccC---hHHHhhcCCEEEEee
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF-----ALND---NHRIIKEAEYVFLAM 132 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~-----~~~s---~~e~~~~aDvIilaV 132 (341)
|+++|.|.|+ |.+|+.+++.|++.| ++|++.+|++.+. +.. ++ -..+ ..++++..|+||-+.
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~--~~~--~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 71 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLA----HEVRLSDIVDLGA--AEA--HEEIVACDLADAQAVHDLVKDCDGIIHLG 71 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTE----EEEEECCSSCCCC--CCT--TEEECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCC----CEEEEEeCCCccc--cCC--CccEEEccCCCHHHHHHHHcCCCEEEECC
Confidence 5568999987 999999999999988 4999999986532 111 21 1122 345567899999875
No 477
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=93.81 E-value=0.4 Score=41.94 Aligned_cols=82 Identities=11% Similarity=0.089 Sum_probs=51.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
++|.|.|+ |.+|.++++.|++.|+ +|++.+|++++.+.+.+++ .+ ...++.++.. .+..+.++
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~--~~~~~~~~~~D~~~~~~~~~~ 78 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGA----SVVVSDINADAANHVVDEI-------QQ--LGGQAFACRCDITSEQELSAL 78 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTC----EEEEEESCHHHHHHHHHHH-------HH--TTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHH-------HH--hCCceEEEEcCCCCHHHHHHH
Confidence 45666665 9999999999999984 8999999987765543310 00 1123444333 34567777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.+||++++
T Consensus 79 ~~~~-~~~~--~~~d~vi~~Ag 97 (255)
T 1fmc_A 79 ADFA-ISKL--GKVDILVNNAG 97 (255)
T ss_dssp HHHH-HHHH--SSCCEEEECCC
T ss_pred HHHH-HHhc--CCCCEEEECCC
Confidence 7665 4433 33347777654
No 478
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=93.77 E-value=0.037 Score=52.08 Aligned_cols=89 Identities=13% Similarity=0.151 Sum_probs=51.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEE-EEcC-ChhhhhhcC---cCC-----------------C--c-cc--cC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQII-ASAP-SERFKLHWP---EPM-----------------D--F-AL--ND 117 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~-v~~r-~~e~~~~l~---~~~-----------------g--~-~~--~s 117 (341)
+||||+|+|.+|..+.+.|.++. .-+|. +.++ +++.+..+. ..+ | + .. .+
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~---~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNP---DIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCT---TEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCCC---CeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCC
Confidence 58999999999999999887763 12444 4444 222221111 001 1 1 11 13
Q ss_pred hHHH-hh--cCCEEEEeeChHHHHHHHHHhhhcccccCCC--cEEEEecC
Q psy316 118 NHRI-IK--EAEYVFLAMKPQYLDSAIQGLVNDKVTLNSS--RCIISMLV 162 (341)
Q Consensus 118 ~~e~-~~--~aDvIilaV~~~~v~~vl~~i~~~~l~~~~~--~iIVs~~a 162 (341)
+.++ .. .+|+||.|++...-.+..... + ..| ++|||..+
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~----l--~~Gak~vVId~pa 122 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKH----L--EAGAKKVIISAPA 122 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHH----H--HTTCSEEEESSCC
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHH----H--HCCCCEEEEeCCC
Confidence 4333 22 699999999976555555443 2 233 38887643
No 479
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=93.70 E-value=0.23 Score=43.57 Aligned_cols=78 Identities=9% Similarity=0.103 Sum_probs=50.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCE-EEEee---ChHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEY-VFLAM---KPQYLDS 139 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDv-IilaV---~~~~v~~ 139 (341)
+++.|.|+ |.+|.++++.|++.|+ +|++.+|++++++.+.+++ ..++ .++.. .+..+.+
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~ 75 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGA----RLILIDREAAALDRAAQEL------------GAAVAARIVADVTDAEAMTA 75 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH------------GGGEEEEEECCTTCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHh------------cccceeEEEEecCCHHHHHH
Confidence 45666655 9999999999999994 8999999987766543321 1122 22222 3456777
Q ss_pred HHHHhhhcccccCCCcEEEEecC
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++++ .. + .+=.+||++++
T Consensus 76 ~~~~~-~~-~--~~id~li~~Ag 94 (254)
T 2wsb_A 76 AAAEA-EA-V--APVSILVNSAG 94 (254)
T ss_dssp HHHHH-HH-H--SCCCEEEECCC
T ss_pred HHHHH-Hh-h--CCCcEEEECCc
Confidence 77766 54 4 33357777654
No 480
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.69 E-value=0.31 Score=42.33 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=50.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|. .++|++.+|++++.+.+.+ . ...++.++.+ .+..+.++
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~--~~~V~~~~r~~~~~~~l~~-~-----------~~~~~~~~~~D~~~~~~~~~~ 69 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKN--IRHIIATARDVEKATELKS-I-----------KDSRVHVLPLTVTCDKSLDTF 69 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTT--CCEEEEEESSGGGCHHHHT-C-----------CCTTEEEEECCTTCHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHhcCC--CcEEEEEecCHHHHHHHHh-c-----------cCCceEEEEeecCCHHHHHHH
Confidence 45666654 9999999999999881 1389999999877665533 1 1223333333 24566677
Q ss_pred HHHhhhcccccC--CCcEEEEecC
Q psy316 141 IQGLVNDKVTLN--SSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~--~~~iIVs~~a 162 (341)
++++ ...+ . +=.+||++++
T Consensus 70 ~~~~-~~~~--g~~~id~li~~Ag 90 (250)
T 1yo6_A 70 VSKV-GEIV--GSDGLSLLINNAG 90 (250)
T ss_dssp HHHH-HHHH--GGGCCCEEEECCC
T ss_pred HHHH-HHhc--CCCCCcEEEECCc
Confidence 7665 4433 2 2247777654
No 481
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.69 E-value=0.28 Score=46.18 Aligned_cols=77 Identities=14% Similarity=0.187 Sum_probs=54.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--ccc------ChHHHhh-----cCCEEEE
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALN------DNHRIIK-----EAEYVFL 130 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~------s~~e~~~-----~aDvIil 130 (341)
..+|.|+|+|.+|...++.+...|. .+|++.++++++++.+++ +|+ ..+ +..+.+. ..|+||-
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga---~~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid 267 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGA---ARIIGVDINKDKFAKAKE-VGATECVNPQDYKKPIQEVLTEMSNGGVDFSFE 267 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---SEEEEECSCGGGHHHHHH-TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---CeEEEEcCCHHHHHHHHH-hCCceEecccccchhHHHHHHHHhCCCCcEEEE
Confidence 3589999999999999888777773 379999999998887765 675 221 1222222 4799999
Q ss_pred eeCh-HHHHHHHHHh
Q psy316 131 AMKP-QYLDSAIQGL 144 (341)
Q Consensus 131 aV~~-~~v~~vl~~i 144 (341)
++.. ..+...++-+
T Consensus 268 ~~g~~~~~~~~~~~l 282 (374)
T 2jhf_A 268 VIGRLDTMVTALSCC 282 (374)
T ss_dssp CSCCHHHHHHHHHHB
T ss_pred CCCCHHHHHHHHHHh
Confidence 9864 5555555544
No 482
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.66 E-value=0.11 Score=48.78 Aligned_cols=45 Identities=18% Similarity=0.064 Sum_probs=37.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF 113 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~ 113 (341)
..+|.|+|+|.+|...++.+...|. +|++.++++++++.+++ +|+
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~Ga----~Vi~~~~~~~~~~~~~~-lGa 234 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKATGA----EVIVTSSSREKLDRAFA-LGA 234 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHH-HTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC----EEEEEecCchhHHHHHH-cCC
Confidence 3689999999999999988888884 89999999988877655 565
No 483
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=93.66 E-value=0.23 Score=44.00 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=51.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcC-ChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAP-SERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDS 139 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r-~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~ 139 (341)
++|.|.|+ |.+|.++++.|++.|. +|++.+| ++++.+.+.+++ .+ ...++.++.. .+..+.+
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~----~v~~~~r~~~~~~~~~~~~l-------~~--~~~~~~~~~~D~~~~~~~~~ 88 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGA----SVVVNYGSSSKAAEEVVAEL-------KK--LGAQGVAIQADISKPSEVVA 88 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHH-------HH--TTCCEEEEECCTTSHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC----EEEEEcCCchHHHHHHHHHH-------Hh--cCCcEEEEEecCCCHHHHHH
Confidence 45666665 8999999999999994 8998888 766655443210 00 1234444443 3456777
Q ss_pred HHHHhhhcccccCCCcEEEEecC
Q psy316 140 AIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 140 vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++++ ...+ .+=.+||++++
T Consensus 89 ~~~~~-~~~~--~~~d~vi~~Ag 108 (274)
T 1ja9_A 89 LFDKA-VSHF--GGLDFVMSNSG 108 (274)
T ss_dssp HHHHH-HHHH--SCEEEEECCCC
T ss_pred HHHHH-HHHc--CCCCEEEECCC
Confidence 77766 5444 33346776643
No 484
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.65 E-value=0.059 Score=49.79 Aligned_cols=65 Identities=14% Similarity=-0.025 Sum_probs=43.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCc-CCCc-cccChHHHhhcCCEEEEee
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPE-PMDF-ALNDNHRIIKEAEYVFLAM 132 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~-~~g~-~~~s~~e~~~~aDvIilaV 132 (341)
..|+|.|.|+ |-+|+.+++.|++.|+ +|++.+|++.. ..+.- ...+ ...+..++++.+|+||-+.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~----~V~~~~r~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 85 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGR----TVRGFDLRPSG-TGGEEVVGSLEDGQALSDAIMGVSAVLHLG 85 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTC----CEEEEESSCCS-SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC----EEEEEeCCCCC-CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence 3478999987 9999999999999994 99999998654 11100 0001 1122345677899999764
No 485
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=93.65 E-value=0.11 Score=48.66 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=45.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEE-EEcC-Chhhhh---hcCc---CC--------------C--c-cc--cC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQII-ASAP-SERFKL---HWPE---PM--------------D--F-AL--ND 117 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~-v~~r-~~e~~~---~l~~---~~--------------g--~-~~--~s 117 (341)
+||||+|.|.+|..+.+.|.++.. -+|. +.++ +++.+. +... .+ | + .. .+
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~---veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSD---IEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSS---EEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCC---eEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCC
Confidence 589999999999999999887642 3444 4555 344322 1111 01 0 0 11 13
Q ss_pred hHHH-h--hcCCEEEEeeChHHHHHHHHH
Q psy316 118 NHRI-I--KEAEYVFLAMKPQYLDSAIQG 143 (341)
Q Consensus 118 ~~e~-~--~~aDvIilaV~~~~v~~vl~~ 143 (341)
+.++ . ..+|+||.|++...-.+....
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~ 107 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARK 107 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHH
Confidence 3332 1 479999999997655555443
No 486
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=93.62 E-value=0.34 Score=42.98 Aligned_cols=83 Identities=12% Similarity=0.095 Sum_probs=52.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|. +|++.+|++++++.+.+++ .+.....++.++.+ .+..+..+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~v~~~ 76 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGA----RLLLFSRNREKLEAAASRI-------ASLVSGAQVDIVAGDIREPGDIDRL 76 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HHHSTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHH-------HhcCCCCeEEEEEccCCCHHHHHHH
Confidence 45666655 8999999999999994 8999999987766544321 11000124444443 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ . =.++|++++
T Consensus 77 ~~~~-~~~~--g-id~lv~~Ag 94 (260)
T 2z1n_A 77 FEKA-RDLG--G-ADILVYSTG 94 (260)
T ss_dssp HHHH-HHTT--C-CSEEEECCC
T ss_pred HHHH-HHhc--C-CCEEEECCC
Confidence 7776 5444 3 247777644
No 487
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.62 E-value=0.06 Score=50.58 Aligned_cols=91 Identities=11% Similarity=0.151 Sum_probs=52.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEE-EEcC-ChhhhhhcC---c---CC--------------C--c-cc--cC
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQII-ASAP-SERFKLHWP---E---PM--------------D--F-AL--ND 117 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~-v~~r-~~e~~~~l~---~---~~--------------g--~-~~--~s 117 (341)
.||||+|+|.+|..+.+.|.+++ -+.-+|. +.++ +++.+..+. . ++ | + .. .+
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~-~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERK-NPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 48999999999999999998872 0123555 4444 232222111 0 00 1 1 11 24
Q ss_pred hHHH-hh--cCCEEEEeeChHHHHHHHHHhhhcccccCCC--cEEEEecC
Q psy316 118 NHRI-IK--EAEYVFLAMKPQYLDSAIQGLVNDKVTLNSS--RCIISMLV 162 (341)
Q Consensus 118 ~~e~-~~--~aDvIilaV~~~~v~~vl~~i~~~~l~~~~~--~iIVs~~a 162 (341)
+.++ .. .+|+||.|++...-.+..... + ..| ++|||..+
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~----l--~aGakkvVId~~a 123 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELH----L--QAGAKKVIITAPA 123 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHH----H--HTTCSEEEESSCC
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHH----H--HcCCcEEEEeCCC
Confidence 4443 23 799999999976555555443 3 233 38887643
No 488
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=93.61 E-value=0.36 Score=43.19 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=51.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHH
Q psy316 63 MWTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLD 138 (341)
Q Consensus 63 m~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~ 138 (341)
|.+++.|.|+ |-+|.++++.|++.|. +|++++|++++++.+..+ .+.++.+ .+..+.
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~---------------~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGH----PLLLLARRVERLKALNLP---------------NTLCAQVDVTDKYTFD 75 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC----CEEEEESCHHHHHTTCCT---------------TEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHhhcC---------------CceEEEecCCCHHHHH
Confidence 3445566665 8999999999999994 899999998887765432 1222222 345666
Q ss_pred HHHHHhhhcccccCCCcEEEEecC
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++++ ...+ .+=.++|++++
T Consensus 76 ~~~~~~-~~~~--g~iD~lvnnAg 96 (266)
T 3p19_A 76 TAITRA-EKIY--GPADAIVNNAG 96 (266)
T ss_dssp HHHHHH-HHHH--CSEEEEEECCC
T ss_pred HHHHHH-HHHC--CCCCEEEECCC
Confidence 777665 4444 33347777644
No 489
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.60 E-value=0.27 Score=46.34 Aligned_cols=76 Identities=17% Similarity=0.176 Sum_probs=53.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--ccc------ChHHHhh-----cCCEEEEe
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALN------DNHRIIK-----EAEYVFLA 131 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~------s~~e~~~-----~aDvIila 131 (341)
.+|.|+|+|.+|...++.+...|. .+|++.++++++++.+++ +|+ ..+ +..+.+. ..|+||-+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga---~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~ 272 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAGA---SRIIAIDINGEKFPKAKA-LGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 272 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---SEEEEECSCGGGHHHHHH-TTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC---CeEEEEcCCHHHHHHHHH-hCCcEEEccccccchHHHHHHHHhCCCccEEEEC
Confidence 589999999999998887777773 379999999998887765 675 221 2222222 47999998
Q ss_pred eCh-HHHHHHHHHh
Q psy316 132 MKP-QYLDSAIQGL 144 (341)
Q Consensus 132 V~~-~~v~~vl~~i 144 (341)
+.. ..+...++-+
T Consensus 273 ~G~~~~~~~~~~~l 286 (376)
T 1e3i_A 273 AGTAQTLKAAVDCT 286 (376)
T ss_dssp SCCHHHHHHHHHTB
T ss_pred CCCHHHHHHHHHHh
Confidence 864 5555555443
No 490
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=93.60 E-value=0.16 Score=45.79 Aligned_cols=80 Identities=11% Similarity=0.169 Sum_probs=52.5
Q ss_pred CCeEEEE-c-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHH
Q psy316 64 WTKVGFI-G-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLD 138 (341)
Q Consensus 64 ~~kIgiI-G-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~ 138 (341)
..|+.+| | .|-+|.++++.|++.|. +|++.+|++++++.+.++++ .++.++.+ .+..+.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~Dv~d~~~v~ 90 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGY----GVALAGRRLDALQETAAEIG------------DDALCVPTDVTDPDSVR 90 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHT------------SCCEEEECCTTSHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHhC------------CCeEEEEecCCCHHHHH
Confidence 3455555 5 58999999999999994 89999999887766544211 23333333 356677
Q ss_pred HHHHHhhhcccccCCCcEEEEecC
Q psy316 139 SAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 139 ~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
.+++++ ...+ .+=.++|++++
T Consensus 91 ~~~~~~-~~~~--g~iD~lVnnAg 111 (272)
T 4dyv_A 91 ALFTAT-VEKF--GRVDVLFNNAG 111 (272)
T ss_dssp HHHHHH-HHHH--SCCCEEEECCC
T ss_pred HHHHHH-HHHc--CCCCEEEECCC
Confidence 777776 5444 33357787654
No 491
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=93.58 E-value=0.29 Score=43.86 Aligned_cols=81 Identities=7% Similarity=0.107 Sum_probs=53.0
Q ss_pred CCCeEE-EEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHH
Q psy316 63 MWTKVG-FIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYL 137 (341)
Q Consensus 63 m~~kIg-iIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v 137 (341)
+..|+. |.| .|-+|.++++.|++.|. +|++.+|++++++.+.+++ ..++.++.+ .+..+
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~Dv~d~~~v 88 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGA----IVGLHGTREDKLKEIAADL------------GKDVFVFSANLSDRKSI 88 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH------------CSSEEEEECCTTSHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHh------------CCceEEEEeecCCHHHH
Confidence 333444 445 58999999999999994 9999999988776654321 123444443 35667
Q ss_pred HHHHHHhhhcccccCCCcEEEEecC
Q psy316 138 DSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 138 ~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+.+++++ ...+ .+=.++|+.++
T Consensus 89 ~~~~~~~-~~~~--g~iD~lvnnAg 110 (266)
T 3grp_A 89 KQLAEVA-EREM--EGIDILVNNAG 110 (266)
T ss_dssp HHHHHHH-HHHH--TSCCEEEECCC
T ss_pred HHHHHHH-HHHc--CCCCEEEECCC
Confidence 7777776 5444 33347777644
No 492
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=93.57 E-value=0.29 Score=44.26 Aligned_cols=81 Identities=12% Similarity=0.096 Sum_probs=53.1
Q ss_pred eEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHHH
Q psy316 66 KVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSAI 141 (341)
Q Consensus 66 kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~vl 141 (341)
++.|.| .|-+|.++++.|++.|. +|++.+|++++++.+.+++. . ...++.++.+ .+..+..++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~l~----~-----~~~~~~~~~~Dv~d~~~v~~~~ 96 (283)
T 3v8b_A 30 VALITGAGSGIGRATALALAADGV----TVGALGRTRTEVEEVADEIV----G-----AGGQAIALEADVSDELQMRNAV 96 (283)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHT----T-----TTCCEEEEECCTTCHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHH----h-----cCCcEEEEEccCCCHHHHHHHH
Confidence 345555 48999999999999994 99999999887766544210 0 1234444444 356777777
Q ss_pred HHhhhcccccCCCcEEEEecC
Q psy316 142 QGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 142 ~~i~~~~l~~~~~~iIVs~~a 162 (341)
+++ ...+ .+=.++|+.++
T Consensus 97 ~~~-~~~~--g~iD~lVnnAg 114 (283)
T 3v8b_A 97 RDL-VLKF--GHLDIVVANAG 114 (283)
T ss_dssp HHH-HHHH--SCCCEEEECCC
T ss_pred HHH-HHHh--CCCCEEEECCC
Confidence 776 5444 33347777654
No 493
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.55 E-value=0.14 Score=47.47 Aligned_cols=75 Identities=19% Similarity=0.202 Sum_probs=52.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--cc----cChHHHhh-----cCCEEEEe
Q psy316 64 WTKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--AL----NDNHRIIK-----EAEYVFLA 131 (341)
Q Consensus 64 ~~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~----~s~~e~~~-----~aDvIila 131 (341)
..+|.|+|+ |.+|.+.++.+...|. +|++++|++++++.+.+++|. .. .+..+.+. ..|++|-+
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga----~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 225 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGC----RVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDN 225 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEEC
Confidence 468999998 9999999998888884 899999999998887344675 11 12222221 37888888
Q ss_pred eChHHHHHHHH
Q psy316 132 MKPQYLDSAIQ 142 (341)
Q Consensus 132 V~~~~v~~vl~ 142 (341)
+-...+...++
T Consensus 226 ~g~~~~~~~~~ 236 (336)
T 4b7c_A 226 VGGEILDTVLT 236 (336)
T ss_dssp SCHHHHHHHHT
T ss_pred CCcchHHHHHH
Confidence 87654444443
No 494
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=93.55 E-value=0.35 Score=43.21 Aligned_cols=85 Identities=11% Similarity=0.088 Sum_probs=51.2
Q ss_pred CCCC-eEEEEc-ccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHH
Q psy316 62 PMWT-KVGFIG-AGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQY 136 (341)
Q Consensus 62 ~m~~-kIgiIG-~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~ 136 (341)
.|.. ++.|.| .|.+|.++++.|++.|+ +|++.+|++++.+.+.+. ..+ ...++.++.+ .+..
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~----~V~~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~Dl~~~~~ 97 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGA----DVAIWYNSHPADEKAEHL-------QKT--YGVHSKAYKCNISDPKS 97 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTC----EEEEEESSSCCHHHHHHH-------HHH--HCSCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHH-------HHh--cCCcceEEEeecCCHHH
Confidence 3444 455555 58999999999999994 899999986654433221 000 1234444443 3456
Q ss_pred HHHHHHHhhhcccccCCCcEEEEecC
Q psy316 137 LDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 137 v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
+.++++++ ...+ .+=.+||++++
T Consensus 98 ~~~~~~~~-~~~~--g~id~li~~Ag 120 (279)
T 3ctm_A 98 VEETISQQ-EKDF--GTIDVFVANAG 120 (279)
T ss_dssp HHHHHHHH-HHHH--SCCSEEEECGG
T ss_pred HHHHHHHH-HHHh--CCCCEEEECCc
Confidence 77777666 4433 33347777654
No 495
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=93.55 E-value=0.29 Score=43.19 Aligned_cols=82 Identities=15% Similarity=0.140 Sum_probs=53.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|. +|++.+|++++++.+.+++ .+ ...++.++.+ .+..+..+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~l-------~~--~~~~~~~~~~Dv~~~~~~~~~ 74 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGA----AVAIAARRVEKLRALGDEL-------TA--AGAKVHVLELDVADRQGVDAA 74 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH-------HH--TTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHH-------Hh--cCCcEEEEECCCCCHHHHHHH
Confidence 45666655 8999999999999994 9999999988776554321 10 1234444443 35667777
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.++|+.++
T Consensus 75 ~~~~-~~~~--g~id~lv~nAg 93 (247)
T 2jah_A 75 VAST-VEAL--GGLDILVNNAG 93 (247)
T ss_dssp HHHH-HHHH--SCCSEEEECCC
T ss_pred HHHH-HHHc--CCCCEEEECCC
Confidence 7766 4444 33347777643
No 496
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=93.54 E-value=0.41 Score=42.80 Aligned_cols=84 Identities=18% Similarity=0.064 Sum_probs=51.2
Q ss_pred CCCe-EEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChh------------hhhhcCcCCCccccChHHHhhcCCEE
Q psy316 63 MWTK-VGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSER------------FKLHWPEPMDFALNDNHRIIKEAEYV 128 (341)
Q Consensus 63 m~~k-IgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e------------~~~~l~~~~g~~~~s~~e~~~~aDvI 128 (341)
+.-| +.|.|+ |-+|.++++.|++.|. +|++.+|+.+ +++.+.++ .. ....++.
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~ 77 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGA----DIIAVDLCDQIASVPYPLATPEELAATVKL-------VE--DIGSRIV 77 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEECCSCCTTCSSCCCCHHHHHHHHHH-------HH--HHTCCEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC----eEEEEecccccccccccccchHHHHHHHHH-------HH--hcCCeEE
Confidence 4444 555554 8999999999999994 8999998732 22211110 00 1134566
Q ss_pred EEee---ChHHHHHHHHHhhhcccccCCCcEEEEecC
Q psy316 129 FLAM---KPQYLDSAIQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 129 ilaV---~~~~v~~vl~~i~~~~l~~~~~~iIVs~~a 162 (341)
++.+ .+..+.++++++ ...+ .+=.++|++++
T Consensus 78 ~~~~D~~~~~~v~~~~~~~-~~~~--g~id~lv~nAg 111 (278)
T 3sx2_A 78 ARQADVRDRESLSAALQAG-LDEL--GRLDIVVANAG 111 (278)
T ss_dssp EEECCTTCHHHHHHHHHHH-HHHH--CCCCEEEECCC
T ss_pred EEeCCCCCHHHHHHHHHHH-HHHc--CCCCEEEECCC
Confidence 6655 356777777776 5444 33357887754
No 497
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.54 E-value=0.19 Score=47.92 Aligned_cols=68 Identities=21% Similarity=0.223 Sum_probs=48.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--ccc----ChHHHhh------cCCEEEEe
Q psy316 64 WTKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALN----DNHRIIK------EAEYVFLA 131 (341)
Q Consensus 64 ~~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~----s~~e~~~------~aDvIila 131 (341)
..+|.|+|+|.+|...++.+...|. .+|++.++++++++.+++ +|. ..+ +..+.+. ..|+||-+
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga---~~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~ 289 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGA---SKVILSEPSEVRRNLAKE-LGADHVIDPTKENFVEAVLDYTNGLGAKLFLEA 289 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---SEEEEECSCHHHHHHHHH-HTCSEEECTTTSCHHHHHHHHTTTCCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---CEEEEECCCHHHHHHHHH-cCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEEC
Confidence 4689999999999998887777773 489999999998877655 675 221 2222221 47888888
Q ss_pred eChH
Q psy316 132 MKPQ 135 (341)
Q Consensus 132 V~~~ 135 (341)
+...
T Consensus 290 ~g~~ 293 (404)
T 3ip1_A 290 TGVP 293 (404)
T ss_dssp SSCH
T ss_pred CCCc
Confidence 8644
No 498
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=93.54 E-value=0.14 Score=45.76 Aligned_cols=63 Identities=21% Similarity=0.285 Sum_probs=45.2
Q ss_pred eEEEEcc-cHHHHHHHHHHHhc--CCCCCCeEEEEcCChhhhhhcCcCCCc-----cccC---hHHHhhcCCEEEEeeC
Q psy316 66 KVGFIGA-GNMAQAVATSLIRT--GLCIPAQIIASAPSERFKLHWPEPMDF-----ALND---NHRIIKEAEYVFLAMK 133 (341)
Q Consensus 66 kIgiIG~-G~mG~aia~~L~~~--G~~~~~~V~v~~r~~e~~~~l~~~~g~-----~~~s---~~e~~~~aDvIilaV~ 133 (341)
||.|.|+ |.+|+.+++.|++. | ++|++.+|++++.+.+.. .++ -..+ ..++++.+|+||-+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g----~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPA----SQIVAIVRNPAKAQALAA-QGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCG----GGEEEEESCTTTCHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCC----ceEEEEEcChHhhhhhhc-CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 5788987 99999999999987 7 489999998776554433 132 1122 3455678999997764
No 499
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.53 E-value=0.27 Score=46.29 Aligned_cols=76 Identities=16% Similarity=0.171 Sum_probs=53.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCc--ccc------ChHHHhh-----cCCEEEEe
Q psy316 65 TKVGFIGAGNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDF--ALN------DNHRIIK-----EAEYVFLA 131 (341)
Q Consensus 65 ~kIgiIG~G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~--~~~------s~~e~~~-----~aDvIila 131 (341)
.+|.|+|+|.+|...++.....|. .+|++.++++++++.+++ +|+ ..+ +..+.+. ..|+||-+
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~Ga---~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~ 268 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAGA---SRIIGVGTHKDKFPKAIE-LGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC 268 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC---SEEEEECSCGGGHHHHHH-TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC---CeEEEECCCHHHHHHHHH-cCCcEEEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 589999999999998887777773 379999999998887765 775 221 2222222 47999999
Q ss_pred eCh-HHHHHHHHHh
Q psy316 132 MKP-QYLDSAIQGL 144 (341)
Q Consensus 132 V~~-~~v~~vl~~i 144 (341)
+.. ..+...++-+
T Consensus 269 ~g~~~~~~~~~~~l 282 (373)
T 1p0f_A 269 AGRIETMMNALQST 282 (373)
T ss_dssp SCCHHHHHHHHHTB
T ss_pred CCCHHHHHHHHHHH
Confidence 864 5555555444
No 500
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=93.52 E-value=0.32 Score=43.11 Aligned_cols=79 Identities=14% Similarity=0.102 Sum_probs=50.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCCCeEEEEcCChhhhhhcCcCCCccccChHHHhhcCCEEEEee---ChHHHHHH
Q psy316 65 TKVGFIGA-GNMAQAVATSLIRTGLCIPAQIIASAPSERFKLHWPEPMDFALNDNHRIIKEAEYVFLAM---KPQYLDSA 140 (341)
Q Consensus 65 ~kIgiIG~-G~mG~aia~~L~~~G~~~~~~V~v~~r~~e~~~~l~~~~g~~~~s~~e~~~~aDvIilaV---~~~~v~~v 140 (341)
+++.|.|+ |.+|.++++.|++.|. +|++.+|++++++.+.+++. . ++.++.+ .+..+.++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~----~--------~~~~~~~D~~d~~~v~~~ 76 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGA----TVAIADLDVMAAQAVVAGLE----N--------GGFAVEVDVTKRASVDAA 76 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHTCT----T--------CCEEEECCTTCHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHh----c--------CCeEEEEeCCCHHHHHHH
Confidence 45666665 8999999999999994 99999999887765544221 0 2222222 34566677
Q ss_pred HHHhhhcccccCCCcEEEEecC
Q psy316 141 IQGLVNDKVTLNSSRCIISMLV 162 (341)
Q Consensus 141 l~~i~~~~l~~~~~~iIVs~~a 162 (341)
++++ ...+ .+=.+||++++
T Consensus 77 ~~~~-~~~~--g~iD~lv~~Ag 95 (263)
T 3ak4_A 77 MQKA-IDAL--GGFDLLCANAG 95 (263)
T ss_dssp HHHH-HHHH--TCCCEEEECCC
T ss_pred HHHH-HHHc--CCCCEEEECCC
Confidence 7665 4433 33347777654
Done!