Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>psy3161
EGKKSDIAPVVFQQKFSEVINTKYANHTICYTDGSKSPDATGCAFSIGDMVRSTSLNPIN
SIFSAELIAIFLCLEAILESPSDQFLIVSDSRSAIAALANWNNVPNTNKLKSIRPNIKHW
NTSTQDRRIKEVILTRMRIGHTRLTHNHLFTKSDPPICQCGAPLSVRHLLSCPRHGHIRA
SLRPPPSLGDDEEGVNSLFSYLQKLNIYHLI

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy3161
        (211 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ASPGD|ASPL0000075333 - symbol:AN10625 species:162425 "Eme...    98  4.6e-05   2
ASPGD|ASPL0000062864 - symbol:AN0621 species:162425 "Emer...    78  0.00091   2


>ASPGD|ASPL0000075333 [details] [associations]
            symbol:AN10625 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004523 "ribonuclease H activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR002156 InterPro:IPR012337 Pfam:PF00075 PROSITE:PS50879
            GO:GO:0003676 SUPFAM:SSF53098 EMBL:BN001303 GO:GO:0004523
            EnsemblFungi:CADANIAT00005305 Uniprot:C8V7Z8
        Length = 486

 Score = 98 (39.6 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
 Identities = 31/84 (36%), Positives = 43/84 (51%)

Query:   125 QD-RRIKEVILTRMRIGHTRLTHNHLFTKSDPPI----CQCG-APLSVRH-LLSCPRHGH 177
             QD  R    I+ +MR G   L H +L+ +  P +    CQCG A  SVRH LL+CP    
Sbjct:   370 QDLHRALSTIIVQMRTGKIGLRH-YLYQRGVPDVPNSDCQCGRATQSVRHILLACPTFSG 428

Query:   178 IRASLRPPPSLGDDEEG-VNSLFS 200
             +R  +    S G + EG V  +F+
Sbjct:   429 LREEIFGGRSGGPEGEGSVKKIFN 452

 Score = 64 (27.6 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
 Identities = 22/74 (29%), Positives = 36/74 (48%)

Query:    31 YTDGSKSPDATGCAFSIGDMV--RSTSLNPIN--SIFSAELIAIFLCLEAILESPSDQFL 86
             YTDGS      G A      +  RS+ +   +  +++ AEL  I L L  IL+      +
Sbjct:   186 YTDGSGINGRVGAAAICPKYLISRSSYMGQQSESTVYVAELQGILLALVIILQRQMQHAV 245

Query:    87 IVSDSRSAIAALAN 100
             I +D+++ + AL N
Sbjct:   246 IFTDNQATLQALRN 259


>ASPGD|ASPL0000062864 [details] [associations]
            symbol:AN0621 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004523 "ribonuclease H activity"
            evidence=IEA] InterPro:IPR002156 InterPro:IPR012337 PROSITE:PS50879
            EMBL:BN001308 GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0004523
            EnsemblFungi:CADANIAT00002055 HOGENOM:HOG000137572 OMA:CAIPPTP
            Uniprot:C8VS33
        Length = 520

 Score = 78 (32.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
 Identities = 23/77 (29%), Positives = 35/77 (45%)

Query:   102 NNVPNTNKLKSIRPNIKHWNTSTQDRRIKEVILTRM---RIGHTRLTHNH-LFTKSDP-P 156
             N  P T K  +IRP+ K   + +++ ++   +L R+   R GH   T  H  F  +D   
Sbjct:   390 NKAPETYKALNIRPHTKE--SRSREHKLPRWVLGRLVAARTGHGDFTAYHQCFDHTDYLE 447

Query:   157 ICQCGAPLSVRHLLSCP 173
              C CG   +  H   CP
Sbjct:   448 SCTCGKAKTPVHFFFCP 464

 Score = 75 (31.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
 Identities = 24/89 (26%), Positives = 44/89 (49%)

Query:    31 YTDGSKSPDATGCAFSI--GDMVRSTSLNPIN---SIFSAELIAIFLCLEAILESP---- 81
             Y+DGS++    G  ++I  G ++ S    P      ++ AE++     L A L  P    
Sbjct:   264 YSDGSRTSQGAGYGYAIYFGPILVSKGHGPAGPRTEVYDAEIMGAVEGLRAALGQPCVGY 323

Query:    82 SDQFLIVSDSRSAIAALANWNNVPNTNKL 110
             S Q +I+ D+ +A + LA++   P+ + L
Sbjct:   324 STQLVILLDNLAAASLLASYRPTPHRHGL 352


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      211       211   0.00081  112 3  11 22  0.49    32
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  180 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  20.61u 0.07s 20.68t   Elapsed:  00:00:08
  Total cpu time:  20.61u 0.07s 20.68t   Elapsed:  00:00:09
  Start:  Thu Aug 15 12:41:08 2013   End:  Thu Aug 15 12:41:17 2013

Back to top