BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3166
(228 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 150/267 (56%), Gaps = 51/267 (19%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P + L+LG+ LG+GEFG VVK +G +G VAVKMLK NA L
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFH--LKGRAGYTT--VAVKMLKENASPSELRDLLS 75
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE--------------- 110
E N++K V H H++ G C +D L L+VEY G L+ +LRE
Sbjct: 76 EFNVLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 111 -----------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF 141
+YL+ K+VHRDLA RNIL++ +KISDF
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
GLS D+YE++ + ++P++W+A+ESL +IYT +SDVWSFGV+LWEIVTLG NPY
Sbjct: 195 GLSRDVYEEDSYVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
Query: 202 PHIPLCRIVHYLSTGYRMERPASCNEQ 228
P IP R+ + L TG+RMERP +C+E+
Sbjct: 254 PGIPPERLFNLLKTGHRMERPDNCSEE 280
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 193 bits (490), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 149/267 (55%), Gaps = 51/267 (19%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P + L+LG+ LG+GEFG VVK +G +G VAVKMLK NA L
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFH--LKGRAGYTT--VAVKMLKENASPSELRDLLS 75
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE--------------- 110
E N++K V H H++ G C +D L L+VEY G L+ +LRE
Sbjct: 76 EFNVLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 111 -----------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF 141
+YL+ K+VHRDLA RNIL++ +KISDF
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
GLS D+YE++ ++P++W+A+ESL +IYT +SDVWSFGV+LWEIVTLG NPY
Sbjct: 195 GLSRDVYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
Query: 202 PHIPLCRIVHYLSTGYRMERPASCNEQ 228
P IP R+ + L TG+RMERP +C+E+
Sbjct: 254 PGIPPERLFNLLKTGHRMERPDNCSEE 280
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 191 bits (485), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 148/267 (55%), Gaps = 51/267 (19%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P + L+LG+ LG+GEFG VVK +G +G VAVKMLK NA L
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFH--LKGRAGYTT--VAVKMLKENASPSELRDLLS 75
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE--------------- 110
E N++K V H H++ G C +D L L+VEY G L+ +LRE
Sbjct: 76 EFNVLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 111 -----------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF 141
+YL+ +VHRDLA RNIL++ +KISDF
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDF 194
Query: 142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
GLS D+YE++ ++P++W+A+ESL +IYT +SDVWSFGV+LWEIVTLG NPY
Sbjct: 195 GLSRDVYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
Query: 202 PHIPLCRIVHYLSTGYRMERPASCNEQ 228
P IP R+ + L TG+RMERP +C+E+
Sbjct: 254 PGIPPERLFNLLKTGHRMERPDNCSEE 280
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 187 bits (474), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 154/263 (58%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 85
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YLR
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + ++N + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 206 DINNIDYYKNTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 265 VEELFKLLKEGHRMDKPANCTNE 287
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 185 bits (469), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 153/263 (58%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 85
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YLR
Sbjct: 86 DLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + ++ + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 206 DINNIDYYKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 265 VEELFKLLKEGHRMDKPANCTNE 287
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 184 bits (466), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 152/263 (57%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 85
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I+ +G C +D L ++VEY + G+L+ YLR
Sbjct: 86 DLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + ++ + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 206 DINNIDYYKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 265 VEELFKLLKEGHRMDKPANCTNE 287
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 153/263 (58%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 85
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YLR
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V++I+DFGL+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + ++ + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 206 DINNIDYYKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 265 VEELFKLLKEGHRMDKPANCTNE 287
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 183 bits (465), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 153/263 (58%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 131
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YLR
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + ++ + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 252 DINNIDYYKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 311 VEELFKLLKEGHRMDKPANCTNE 333
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 183 bits (465), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 153/262 (58%), Gaps = 48/262 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK 63
P +RL+LG+ LG+G FG VV GL D P +VAVKMLK++A K
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNR------VTKVAVKMLKSDATEKDLSD 79
Query: 64 FLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE------------ 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YL+
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 139
Query: 111 ------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED 146
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+ D
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 147 IYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
I+ + ++ + +LP++W+A E+L IYT++SDVWSFGV+LWEI TLG +PYP +P+
Sbjct: 200 IHHIDYYKKTT-NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Query: 207 CRIVHYLSTGYRMERPASCNEQ 228
+ L G+RM++P++C +
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNE 280
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 183 bits (465), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 153/262 (58%), Gaps = 48/262 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK 63
P +RL+LG+ LG+G FG VV GL D P +VAVKMLK++A K
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNR------VTKVAVKMLKSDATEKDLSD 79
Query: 64 FLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE------------ 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YL+
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNP 139
Query: 111 ------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED 146
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+ D
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 147 IYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
I+ + ++ + +LP++W+A E+L IYT++SDVWSFGV+LWEI TLG +PYP +P+
Sbjct: 200 IHHIDYYKKTT-NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Query: 207 CRIVHYLSTGYRMERPASCNEQ 228
+ L G+RM++P++C +
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNE 280
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 183 bits (465), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 153/262 (58%), Gaps = 48/262 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK 63
P +RL+LG+ LG+G FG VV GL D P +VAVKMLK++A K
Sbjct: 19 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNR------VTKVAVKMLKSDATEKDLSD 72
Query: 64 FLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE------------ 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YL+
Sbjct: 73 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 132
Query: 111 ------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED 146
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+ D
Sbjct: 133 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 192
Query: 147 IYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
I+ + ++ + +LP++W+A E+L IYT++SDVWSFGV+LWEI TLG +PYP +P+
Sbjct: 193 IHHIDYYKKTT-NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 251
Query: 207 CRIVHYLSTGYRMERPASCNEQ 228
+ L G+RM++P++C +
Sbjct: 252 EELFKLLKEGHRMDKPSNCTNE 273
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 183 bits (464), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 153/262 (58%), Gaps = 48/262 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK 63
P +RL+LG+ LG+G FG VV GL D P +VAVKMLK++A K
Sbjct: 15 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNR------VTKVAVKMLKSDATEKDLSD 68
Query: 64 FLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE------------ 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YL+
Sbjct: 69 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 128
Query: 111 ------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED 146
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+ D
Sbjct: 129 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 188
Query: 147 IYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
I+ + ++ + +LP++W+A E+L IYT++SDVWSFGV+LWEI TLG +PYP +P+
Sbjct: 189 IHHIDYYKKTT-NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 247
Query: 207 CRIVHYLSTGYRMERPASCNEQ 228
+ L G+RM++P++C +
Sbjct: 248 EELFKLLKEGHRMDKPSNCTNE 269
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 183 bits (464), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 153/263 (58%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 24 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 77
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YLR
Sbjct: 78 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + ++ + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 198 DINNIDYYKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 256
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 257 VEELFKLLKEGHRMDKPANCTNE 279
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 183 bits (464), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 152/263 (57%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 85
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YLR
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + + + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 206 DINNIDXXKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 265 VEELFKLLKEGHRMDKPANCTNE 287
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 183 bits (464), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 153/262 (58%), Gaps = 48/262 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK 63
P +RL+LG+ LG+G FG VV GL D P +VAVKMLK++A K
Sbjct: 18 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNR------VTKVAVKMLKSDATEKDLSD 71
Query: 64 FLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE------------ 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YL+
Sbjct: 72 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 131
Query: 111 ------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED 146
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+ D
Sbjct: 132 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 191
Query: 147 IYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
I+ + ++ + +LP++W+A E+L IYT++SDVWSFGV+LWEI TLG +PYP +P+
Sbjct: 192 IHHIDYYKKTT-NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 250
Query: 207 CRIVHYLSTGYRMERPASCNEQ 228
+ L G+RM++P++C +
Sbjct: 251 EELFKLLKEGHRMDKPSNCTNE 272
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 153/262 (58%), Gaps = 48/262 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK 63
P +RL+LG+ LG+G FG VV GL D P +VAVKMLK++A K
Sbjct: 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNR------VTKVAVKMLKSDATEKDLSD 120
Query: 64 FLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE------------ 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YL+
Sbjct: 121 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 180
Query: 111 ------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED 146
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+ D
Sbjct: 181 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 240
Query: 147 IYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
I+ + ++ + +LP++W+A E+L IYT++SDVWSFGV+LWEI TLG +PYP +P+
Sbjct: 241 IHHIDYYKKTT-NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299
Query: 207 CRIVHYLSTGYRMERPASCNEQ 228
+ L G+RM++P++C +
Sbjct: 300 EELFKLLKEGHRMDKPSNCTNE 321
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 152/263 (57%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 85
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YLR
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + + + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 206 DINNIDXXKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 265 VEELFKLLKEGHRMDKPANCTNE 287
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 153/262 (58%), Gaps = 48/262 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK 63
P +RL+LG+ LG+G FG VV GL D P +VAVKMLK++A K
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNR------VTKVAVKMLKSDATEKDLSD 79
Query: 64 FLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE------------ 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YL+
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNP 139
Query: 111 ------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED 146
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+ D
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 147 IYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
I+ + ++ + +LP++W+A E+L IYT++SDVWSFGV+LWEI TLG +PYP +P+
Sbjct: 200 IHHIDYYKKTT-NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Query: 207 CRIVHYLSTGYRMERPASCNEQ 228
+ L G+RM++P++C +
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNE 280
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 153/263 (58%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A +
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEEDLS 85
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YLR
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + ++ + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 206 DINNIDYYKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 265 VEELFKLLKEGHRMDKPANCTNE 287
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 153/262 (58%), Gaps = 48/262 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK 63
P +RL+LG+ LG+G FG VV GL D P +VAVKMLK++A K
Sbjct: 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNR------VTKVAVKMLKSDATEKDLSD 64
Query: 64 FLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE------------ 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YL+
Sbjct: 65 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNP 124
Query: 111 ------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED 146
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+ D
Sbjct: 125 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 147 IYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
I+ + ++ + +LP++W+A E+L IYT++SDVWSFGV+LWEI TLG +PYP +P+
Sbjct: 185 IHHIDYYKKTT-NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 243
Query: 207 CRIVHYLSTGYRMERPASCNEQ 228
+ L G+RM++P++C +
Sbjct: 244 EELFKLLKEGHRMDKPSNCTNE 265
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 153/263 (58%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 21 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 74
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YLR
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + ++ + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 195 DINNIDYYKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 253
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 254 VEELFKLLKEGHRMDKPANCTNE 276
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 182 bits (462), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 152/263 (57%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 85
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++V Y + G+L+ YLR
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + ++ + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 206 DINNIDYYKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 265 VEELFKLLKEGHRMDKPANCTNE 287
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 182 bits (462), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 152/262 (58%), Gaps = 48/262 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK 63
P +RL+LG+ LG+G FG VV GL D P +VAVKMLK++A K
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNR------VTKVAVKMLKSDATEKDLSD 79
Query: 64 FLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE------------ 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YL+
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNP 139
Query: 111 ------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED 146
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+ D
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 147 IYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
I+ + + + +LP++W+A E+L IYT++SDVWSFGV+LWEI TLG +PYP +P+
Sbjct: 200 IHHIDXXKKTT-NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Query: 207 CRIVHYLSTGYRMERPASCNEQ 228
+ L G+RM++P++C +
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNE 280
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 152/263 (57%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 85
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++V Y + G+L+ YLR
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDLA RN+L++ +V+KI+DFGL+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + ++ + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 206 DINNIDYYKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 265 VEELFKLLKEGHRMDKPANCTNE 287
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 181 bits (460), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 152/263 (57%), Gaps = 48/263 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P ++L LG+ LG+G FG VV G+ D P E A+ VAVKMLK +A K
Sbjct: 19 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKE------AVTVAVKMLKDDATEKDLS 72
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +MK +GKH +I++ +G C +D L ++VEY + G+L+ YLR
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 111 -------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE 145
EYL++ K +HRDL RN+L++ +V+KI+DFGL+
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
Query: 146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
DI + ++ + +LP++W+A E+L +YT++SDVWSFGV++WEI TLG +PYP IP
Sbjct: 193 DINNIDYYKKTT-NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 251
Query: 206 LCRIVHYLSTGYRMERPASCNEQ 228
+ + L G+RM++PA+C +
Sbjct: 252 VEELFKLLKEGHRMDKPANCTNE 274
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 137/272 (50%), Gaps = 52/272 (19%)
Query: 3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
L +P E L G+VLG G FG V+ G S ++VAVKMLK AD+ +
Sbjct: 38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVS----IQVAVKMLKEKADSSERE 93
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCC-YKDELRLVVEYCALGDLQSYLRE----------- 110
+ E+ +M +G H++IV+ +G C + L+ EYC GDL +YLR
Sbjct: 94 ALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIE 153
Query: 111 --------------------------------EYLSNNKVVHRDLATRNILLSSPHVVKI 138
E+L VHRDLA RN+L++ VVKI
Sbjct: 154 YENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKI 213
Query: 139 SDFGLSEDIY-EQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
DFGL+ DI + N G + +LP++W+A ESL IYT KSDVWS+G++LWEI +LG
Sbjct: 214 CDFGLARDIMSDSNYVVRG--NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271
Query: 198 ANPYPHIPL-CRIVHYLSTGYRMERPASCNEQ 228
NPYP IP+ + G++M++P E+
Sbjct: 272 VNPYPGIPVDANFYKLIQNGFKMDQPFYATEE 303
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 140/251 (55%), Gaps = 41/251 (16%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGL-LGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
+P L G+ LG G FG VV+ G G + A ++VAVKMLK+ A A + +
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKED-----AVLKVAVKMLKSTAHADEKEALM 89
Query: 66 KEINLMKDVGKHDHIVSFIGCC-YKDELRLVVEYCALGDLQSYLREE------------- 111
E+ +M +G+H++IV+ +G C + + ++ EYC GDL ++LR +
Sbjct: 90 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 112 -----------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY-EQNVF 153
+L++ +HRD+A RN+LL++ HV KI DFGL+ DI + N
Sbjct: 150 ELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 209
Query: 154 QNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL-CRIVHY 212
G + +LP++W+A ES+ +YT +SDVWS+G++LWEI +LG NPYP I + +
Sbjct: 210 VKG--NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 267
Query: 213 LSTGYRMERPA 223
+ GY+M +PA
Sbjct: 268 VKDGYQMAQPA 278
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 140/251 (55%), Gaps = 41/251 (16%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGL-LGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
+P L G+ LG G FG VV+ G G + A ++VAVKMLK+ A A + +
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKED-----AVLKVAVKMLKSTAHADEKEALM 97
Query: 66 KEINLMKDVGKHDHIVSFIGCC-YKDELRLVVEYCALGDLQSYLREE------------- 111
E+ +M +G+H++IV+ +G C + + ++ EYC GDL ++LR +
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 112 -----------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY-EQNVF 153
+L++ +HRD+A RN+LL++ HV KI DFGL+ DI + N
Sbjct: 158 ELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 217
Query: 154 QNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL-CRIVHY 212
G + +LP++W+A ES+ +YT +SDVWS+G++LWEI +LG NPYP I + +
Sbjct: 218 VKG--NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 275
Query: 213 LSTGYRMERPA 223
+ GY+M +PA
Sbjct: 276 VKDGYQMAQPA 286
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 157 bits (397), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 142/255 (55%), Gaps = 48/255 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 24 FPRDRLNLGKPLGRGAFGQVIEAD-AFGIDKTATXRT---VAVKMLKEGATHSEHRALMS 79
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKD 139
Query: 111 ------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ-N 151
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DIY+ +
Sbjct: 140 FLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 152 VFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL----C 207
+ G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + + C
Sbjct: 200 YVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 257
Query: 208 RIVHYLSTGYRMERP 222
R L G RM P
Sbjct: 258 R---RLKEGTRMRAP 269
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 140/252 (55%), Gaps = 42/252 (16%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 24 FPRDRLNLGKPLGRGAFGQVIEAD-AFGIDKTATXRT---VAVKMLKEGATHSEHRALMS 79
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKD 139
Query: 111 ------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ-N 151
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DIY+ +
Sbjct: 140 FLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPD 199
Query: 152 VFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC-RIV 210
+ G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 200 YVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFX 257
Query: 211 HYLSTGYRMERP 222
L G RM P
Sbjct: 258 RRLKEGTRMRAP 269
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 156 bits (395), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 140/255 (54%), Gaps = 45/255 (17%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGL-LGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
+P L G+ LG G FG VV+ G G + A ++VAVKMLK+ A A + +
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKED-----AVLKVAVKMLKSTAHADEKEALM 97
Query: 66 KEINLMKDVGKHDHIVSFIGCC-YKDELRLVVEYCALGDLQSYLREE------------- 111
E+ +M +G+H++IV+ +G C + + ++ EYC GDL ++LR +
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 112 ---------------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY-E 149
+L++ +HRD+A RN+LL++ HV KI DFGL+ DI +
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 150 QNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL-CR 208
N G + +LP++W+A ES+ +YT +SDVWS+G++LWEI +LG NPYP I + +
Sbjct: 218 SNYIVKG--NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 275
Query: 209 IVHYLSTGYRMERPA 223
+ GY+M +PA
Sbjct: 276 FYKLVKDGYQMAQPA 290
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 156 bits (395), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 140/255 (54%), Gaps = 45/255 (17%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGL-LGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
+P L G+ LG G FG VV+ G G + A ++VAVKMLK+ A A + +
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKED-----AVLKVAVKMLKSTAHADEKEALM 97
Query: 66 KEINLMKDVGKHDHIVSFIGCC-YKDELRLVVEYCALGDLQSYLREE------------- 111
E+ +M +G+H++IV+ +G C + + ++ EYC GDL ++LR +
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 112 ---------------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY-E 149
+L++ +HRD+A RN+LL++ HV KI DFGL+ DI +
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 150 QNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL-CR 208
N G + +LP++W+A ES+ +YT +SDVWS+G++LWEI +LG NPYP I + +
Sbjct: 218 SNYIVKG--NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 275
Query: 209 IVHYLSTGYRMERPA 223
+ GY+M +PA
Sbjct: 276 FYKLVKDGYQMAQPA 290
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 156 bits (394), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 142/259 (54%), Gaps = 52/259 (20%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 79
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 111 ----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY 148
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DIY
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 149 EQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL- 206
+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 200 KDPDXVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
Query: 207 ---CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 258 EEFCR---RLKEGTRMRAP 273
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 156 bits (394), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 142/259 (54%), Gaps = 52/259 (20%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 61 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 116
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR
Sbjct: 117 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 176
Query: 111 ----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY 148
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DIY
Sbjct: 177 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 236
Query: 149 EQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL- 206
+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 237 KDPDYVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294
Query: 207 ---CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 295 EEFCR---RLKEGTRMRAP 310
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 142/259 (54%), Gaps = 52/259 (20%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 26 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 81
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPED 141
Query: 111 ----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY 148
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DIY
Sbjct: 142 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 201
Query: 149 EQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL- 206
+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 202 KDPDYVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 259
Query: 207 ---CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 260 EEFCR---RLKEGTRMRAP 275
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 142/259 (54%), Gaps = 52/259 (20%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 79
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 111 ----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY 148
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DIY
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 149 EQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL- 206
+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 200 KDPDYVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
Query: 207 ---CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 258 EEFCR---RLKEGTRMRAP 273
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 140/257 (54%), Gaps = 47/257 (18%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGL-LGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
+P L G+ LG G FG VV+ G G + A ++VAVKMLK+ A A + +
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKED-----AVLKVAVKMLKSTAHADEKEALM 97
Query: 66 KEINLMKDVGKHDHIVSFIGCC-YKDELRLVVEYCALGDLQSYLREE------------- 111
E+ +M +G+H++IV+ +G C + + ++ EYC GDL ++LR +
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 112 -----------------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY 148
+L++ +HRD+A RN+LL++ HV KI DFGL+ DI
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 217
Query: 149 -EQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL- 206
+ N G + +LP++W+A ES+ +YT +SDVWS+G++LWEI +LG NPYP I +
Sbjct: 218 NDSNYIVKG--NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN 275
Query: 207 CRIVHYLSTGYRMERPA 223
+ + GY+M +PA
Sbjct: 276 SKFYKLVKDGYQMAQPA 292
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 141/259 (54%), Gaps = 52/259 (20%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 70
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++ E+C G+L +YLR
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 111 ----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY 148
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DIY
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 190
Query: 149 EQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL- 206
+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 191 KDPDYVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
Query: 207 ---CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 249 EEFCR---RLKEGTRMRAP 264
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 141/259 (54%), Gaps = 52/259 (20%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 70
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++ E+C G+L +YLR
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 111 ----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY 148
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DIY
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 190
Query: 149 EQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL- 206
+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 191 KDPDYVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
Query: 207 ---CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 249 EEFCR---RLKEGTRMRAP 264
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 141/257 (54%), Gaps = 50/257 (19%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 26 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATXRT---VAVKMLKEGATHSEHRALMS 81
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLY 141
Query: 111 --------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ 150
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DI +
Sbjct: 142 KDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 151 -NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL--- 206
+ + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 202 PDXVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
Query: 207 -CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 260 FCR---RLKEGTRMRAP 273
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 154 bits (388), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 141/259 (54%), Gaps = 52/259 (20%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 70
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 111 ----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY 148
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DI
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 149 EQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL- 206
+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 191 KDPDXVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
Query: 207 ---CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 249 EEFCR---RLKEGTRMRAP 264
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 153 bits (387), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 141/259 (54%), Gaps = 52/259 (20%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 79
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 111 ----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY 148
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DI
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 149 EQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL- 206
+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 200 KDPDXVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
Query: 207 ---CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 258 EEFCR---RLKEGTRMRAP 273
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 153 bits (386), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 141/258 (54%), Gaps = 51/258 (19%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 25 FPRDRLNLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 80
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR
Sbjct: 81 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDL 140
Query: 111 ---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYE 149
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DI +
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 150 Q-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL-- 206
+ + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 201 DPDXVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
Query: 207 --CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 259 EFCR---RLKEGTRMRAP 273
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 140/264 (53%), Gaps = 54/264 (20%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGL-LGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
+P L G+ LG G FG VV+ G G + A ++VAVKMLK+ A A + +
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKED-----AVLKVAVKMLKSTAHADEKEALM 82
Query: 66 KEINLMKDVGKHDHIVSFIGCC-YKDELRLVVEYCALGDLQSYLREE------------- 111
E+ +M +G+H++IV+ +G C + + ++ EYC GDL ++LR +
Sbjct: 83 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQ 142
Query: 112 ------------------------------YLSNNKVVHRDLATRNILLSSPHVVKISDF 141
+L++ +HRD+A RN+LL++ HV KI DF
Sbjct: 143 DPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 202
Query: 142 GLSEDIY-EQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANP 200
GL+ DI + N G + +LP++W+A ES+ +YT +SDVWS+G++LWEI +LG NP
Sbjct: 203 GLARDIMNDSNYIVKG--NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 260
Query: 201 YPHIPL-CRIVHYLSTGYRMERPA 223
YP I + + + GY+M +PA
Sbjct: 261 YPGILVNSKFYKLVKDGYQMAQPA 284
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 80
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 81 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 139
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
YL++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + + KL
Sbjct: 140 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 223 ASC 225
C
Sbjct: 260 EYC 262
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 26 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 79
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 80 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 138
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
YL++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + + KL
Sbjct: 139 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 198
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 258
Query: 223 ASC 225
C
Sbjct: 259 EYC 261
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 80
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 81 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 139
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
YL++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + + KL
Sbjct: 140 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 223 ASC 225
C
Sbjct: 260 EYC 262
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 19 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 72
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 73 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 131
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
YL++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + + KL
Sbjct: 132 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 191
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 251
Query: 223 ASC 225
C
Sbjct: 252 EYC 254
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 45 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 98
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 99 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 157
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
YL++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + + KL
Sbjct: 158 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 217
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 277
Query: 223 ASC 225
C
Sbjct: 278 EYC 280
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 46 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 99
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 100 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 158
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
YL++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + + KL
Sbjct: 159 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 218
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 278
Query: 223 ASC 225
C
Sbjct: 279 EYC 281
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 24 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 77
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 78 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 136
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
YL++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + + KL
Sbjct: 137 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 196
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 256
Query: 223 ASC 225
C
Sbjct: 257 EYC 259
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 140/259 (54%), Gaps = 52/259 (20%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 70
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE-------------- 110
E+ ++ +G H ++V+ +G C K L ++ E+C G+L +YLR
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 111 ----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY 148
E+L++ K +HRDLA RNILLS +VVKI DFGL+ DI
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 149 EQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL- 206
+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 191 KDPDXVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
Query: 207 ---CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 249 EEFCR---RLKEGTRMRAP 264
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 25 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 78
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 79 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 137
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
YL++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + + KL
Sbjct: 138 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 197
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 257
Query: 223 ASC 225
C
Sbjct: 258 EYC 260
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 22 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 75
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 76 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 134
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
YL++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + + KL
Sbjct: 135 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 194
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 254
Query: 223 ASC 225
C
Sbjct: 255 EYC 257
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 138/250 (55%), Gaps = 41/250 (16%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKA-NADAKTYDKFLKEINL 70
LILG++LG+GEFG V++G L +G S ++VAVK +K N+ + ++FL E
Sbjct: 36 LILGKILGEGEFGSVMEGNLKQ--EDGTS----LKVAVKTMKLDNSSQREIEEFLSEAAC 89
Query: 71 MKDVGKHDHIVSFIGCCYKDELR------LVVEYCALGDLQSYLR--------------- 109
MKD H +++ +G C + + +++ + GDL +YL
Sbjct: 90 MKDFS-HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQT 148
Query: 110 -----------EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
EYLSN +HRDLA RN +L V ++DFGLS+ IY + ++ G
Sbjct: 149 LLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRI 208
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR 218
+ K+P++W+A+ESL +YT+KSDVW+FGV +WEI T G PYP + + YL G+R
Sbjct: 209 A-KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHR 267
Query: 219 MERPASCNEQ 228
+++P C ++
Sbjct: 268 LKQPEDCLDE 277
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 130/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 26 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 79
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 80 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 138
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
YL++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + KL
Sbjct: 139 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL 198
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 258
Query: 223 ASC 225
C
Sbjct: 259 EYC 261
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 136/257 (52%), Gaps = 46/257 (17%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLG--DGPTEGASGQAAMEVAVKMLKANADAKT-YDKF 64
P ++ LG +LG+GEFG V + L DG + ++VAVKMLKA+ A + ++F
Sbjct: 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDG--------SFVKVAVKMLKADIIASSDIEEF 72
Query: 65 LKEINLMKDVGKHDHIVSFIGCCYKDELR-------LVVEYCALGDLQSYLRE------- 110
L+E MK+ H H+ +G + + +++ + GDL ++L
Sbjct: 73 LREAACMKEF-DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131
Query: 111 -------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQN 151
EYLS+ +HRDLA RN +L+ V ++DFGLS IY +
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 152 VFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVH 211
++ G S KLP++WLALESL N+YT SDVW+FGV +WEI+T G PY I I +
Sbjct: 192 YYRQGCAS-KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN 250
Query: 212 YLSTGYRMERPASCNEQ 228
YL G R+++P C E+
Sbjct: 251 YLIGGNRLKQPPECMEE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 126/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 15 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 63
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ +++E+ G+L YLRE
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 176
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 225 CNEQ 228
C E+
Sbjct: 237 CPEK 240
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 86 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 139
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 140 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 198
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
+L++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + KL
Sbjct: 199 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 258
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 259 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 318
Query: 223 ASC 225
C
Sbjct: 319 EYC 321
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 126/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 20 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 68
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ +++E+ G+L YLRE
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 181
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 225 CNEQ 228
C E+
Sbjct: 242 CPEK 245
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 124/238 (52%), Gaps = 45/238 (18%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G++G V EG + ++ VAVK LK D ++FLKE +MK++ KH
Sbjct: 21 LGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEI-KH 68
Query: 78 DHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------------EYLS 114
++V +G C ++ +++E+ G+L YLRE EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPIRWLALE 170
+HRDLA RN L+ H+VK++DFGLS D Y K PI+W A E
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPE 182
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCNEQ 228
SL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP C E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 240
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 80
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 81 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 139
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
+L++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + KL
Sbjct: 140 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 223 ASC 225
C
Sbjct: 260 EYC 262
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 28 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 81
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 82 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 140
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
+L++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + KL
Sbjct: 141 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 200
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 260
Query: 223 ASC 225
C
Sbjct: 261 EYC 263
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 32 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 85
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 86 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 144
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
+L++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + KL
Sbjct: 145 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 204
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 205 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 264
Query: 223 ASC 225
C
Sbjct: 265 EYC 267
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 25 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 78
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 79 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 137
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
+L++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + KL
Sbjct: 138 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 197
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 257
Query: 223 ASC 225
C
Sbjct: 258 EYC 260
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLD------NDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 81 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 139
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
+L++ K VHRDLA RN +L VK++DFGL+ D+Y++ + + KL
Sbjct: 140 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 223 ASC 225
C
Sbjct: 260 EYC 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 20 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 68
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 181
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 225 CNEQ 228
C E+
Sbjct: 242 CPEK 245
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 125/240 (52%), Gaps = 37/240 (15%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 16 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 64
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ +++E+ G+L YLRE
Sbjct: 65 KEI-KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
EYL +HRDLA RN L+ H+VK++DFGLS + K PI+W A
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--XTAHAGAKFPIKWTA 181
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCNEQ 228
ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP C E+
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 241
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 20 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 68
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 181
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 225 CNEQ 228
C E+
Sbjct: 242 CPEK 245
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 15 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 63
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 176
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 225 CNEQ 228
C E+
Sbjct: 237 CPEK 240
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 20 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 68
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 181
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 225 CNEQ 228
C E+
Sbjct: 242 CPEK 245
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 17 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 65
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 66 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 178
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 225 CNEQ 228
C E+
Sbjct: 239 CPEK 242
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 17 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 65
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 66 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 178
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 225 CNEQ 228
C E+
Sbjct: 239 CPEK 242
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 19 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 67
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 68 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 180
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 240
Query: 225 CNEQ 228
C E+
Sbjct: 241 CPEK 244
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 28 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 76
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 77 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 189
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 190 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 249
Query: 225 CNEQ 228
C E+
Sbjct: 250 CPEK 253
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 15 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 63
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 176
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 225 CNEQ 228
C E+
Sbjct: 237 CPEK 240
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 15 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 63
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 176
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 225 CNEQ 228
C E+
Sbjct: 237 CPEK 240
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 16 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 64
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 65 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAPAGAKFPI 177
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 237
Query: 225 CNEQ 228
C E+
Sbjct: 238 CPEK 241
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 15 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 63
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 64 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 176
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 225 CNEQ 228
C E+
Sbjct: 237 CPEK 240
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 17 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 65
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 66 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HRDLA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAPAGAKFPI 178
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 225 CNEQ 228
C E+
Sbjct: 239 CPEK 242
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 124/240 (51%), Gaps = 37/240 (15%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 20 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 68
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 69 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
EYL +HRDLA RN L+ H+VK++DFGLS + K PI+W A
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--XTAHAGAKFPIKWTA 185
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCNEQ 228
ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP C E+
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 245
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 121/235 (51%), Gaps = 45/235 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G++G V G+ + ++ VAVK LK D ++FLKE +MK++ KH
Sbjct: 40 LGGGQYGEVYVGVWK---------KYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEI-KH 87
Query: 78 DHIVSFIG-CCYKDELRLVVEYCALGDLQSYLRE----------------------EYLS 114
++V +G C + +V EY G+L YLRE EYL
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPIRWLALE 170
+HRDLA RN L+ HVVK++DFGLS D Y K PI+W A E
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTY------TAHAGAKFPIKWTAPE 201
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
SL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L GYRME+P C
Sbjct: 202 SLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGC 256
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 146 bits (369), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 121/234 (51%), Gaps = 37/234 (15%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G+FG V EG + ++ VAVK LK D ++FLKE +MK++ KH
Sbjct: 19 LGGGQFGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEI-KH 66
Query: 78 DHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------------EYLS 114
++V +G C ++ ++ E+ G+L YLRE EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+HRDLA RN L+ H+VK++DFGLS + K PI+W A ESL
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--XTAHAGAKFPIKWTAPESLAY 184
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCNEQ 228
N ++ KSDVW+FGV+LWEI T G +PYP I ++ L YRMERP C E+
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEK 238
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 146 bits (369), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 135/261 (51%), Gaps = 55/261 (21%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P RL G+ LG G FG VV+ GL+ AAM VAVKMLK +A +
Sbjct: 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLI--------KSDAAMTVAVKMLKPSAHLTERE 71
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLREE---------- 111
+ E+ ++ +G H +IV+ +G C LV+ EYC GDL ++LR +
Sbjct: 72 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 131
Query: 112 ----------------------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+L++ +HRDLA RNILL+ + KI DFGL
Sbjct: 132 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 191
Query: 144 SEDIY-EQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
+ DI + N G + +LP++W+A ES+ + +YT +SDVWS+G+ LWE+ +LG++PYP
Sbjct: 192 ARDIKNDSNYVVKG--NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 249
Query: 203 HIPL-CRIVHYLSTGYRMERP 222
+P+ + + G+RM P
Sbjct: 250 GMPVDSKFYKMIKEGFRMLSP 270
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 135/261 (51%), Gaps = 55/261 (21%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P RL G+ LG G FG VV+ GL+ AAM VAVKMLK +A +
Sbjct: 36 FPRNRLSFGKTLGAGAFGKVVEATAYGLI--------KSDAAMTVAVKMLKPSAHLTERE 87
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLREE---------- 111
+ E+ ++ +G H +IV+ +G C LV+ EYC GDL ++LR +
Sbjct: 88 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 147
Query: 112 ----------------------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+L++ +HRDLA RNILL+ + KI DFGL
Sbjct: 148 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 207
Query: 144 SEDIY-EQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
+ DI + N G + +LP++W+A ES+ + +YT +SDVWS+G+ LWE+ +LG++PYP
Sbjct: 208 ARDIKNDSNYVVKG--NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 265
Query: 203 HIPL-CRIVHYLSTGYRMERP 222
+P+ + + G+RM P
Sbjct: 266 GMPVDSKFYKMIKEGFRMLSP 286
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 125/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 219 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 267
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 268 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HR+LA RN L+ H+VK++DFGLS D Y K PI
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAKFPI 380
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 381 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 440
Query: 225 CNEQ 228
C E+
Sbjct: 441 CPEK 444
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 126/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 222 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 270
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 271 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HR+LA RN L+ H+VK++DFGLS D Y + K PI
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA------GAKFPI 383
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 443
Query: 225 CNEQ 228
C E+
Sbjct: 444 CPEK 447
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 126/244 (51%), Gaps = 45/244 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + LG G++G V EG + ++ VAVK LK D ++FLKE +M
Sbjct: 261 ITMKHKLGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVM 309
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
K++ KH ++V +G C ++ ++ E+ G+L YLRE
Sbjct: 310 KEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE----DIYEQNVFQNGEPSEKLPI 164
EYL +HR+LA RN L+ H+VK++DFGLS D Y + K PI
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA------GAKFPI 422
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A ESL N ++ KSDVW+FGV+LWEI T G +PYP I L ++ L YRMERP
Sbjct: 423 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 482
Query: 225 CNEQ 228
C E+
Sbjct: 483 CPEK 486
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 122/234 (52%), Gaps = 37/234 (15%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G++G V EG + ++ VAVK LK D ++FLKE +MK++ KH
Sbjct: 19 LGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEI-KH 66
Query: 78 DHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------------EYLS 114
++V +G C ++ +++E+ G+L YLRE EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+HRDLA RN L+ H+VK++DFGLS + K PI+W A ESL
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--XTAHAGAKFPIKWTAPESLAY 184
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCNEQ 228
N ++ KSDVW+FGV+LWEI T G +PYP I ++ L YRMERP C E+
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEK 238
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 123/234 (52%), Gaps = 37/234 (15%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G++G V EG + ++ VAVK LK D ++FLKE +MK++ KH
Sbjct: 19 LGGGQYGEVY---------EGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEI-KH 66
Query: 78 DHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------------EYLS 114
++V +G C ++ ++ E+ G+L YLRE EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+HRDLA RN L+ H+VK++DFGLS + + F K PI+W A ESL
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTF-TAHAGAKFPIKWTAPESLAY 184
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCNEQ 228
N ++ KSDVW+FGV+LWEI T G +PYP I ++ L YRMERP C E+
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEK 238
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 129/243 (53%), Gaps = 33/243 (13%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
P LI EV+G+G FG V G L D + + AVK L D +FL
Sbjct: 28 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK------KIHCAVKSLNRITDIGEVSQFLT 81
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------- 111
E +MKD H +++S +G C + E +V+ Y GDL++++R E
Sbjct: 82 EGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 140
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEKL 162
+L++ K VHRDLA RN +L VK++DFGL+ D+ ++ + + KL
Sbjct: 141 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL 200
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P++W+ALESL + +T KSDVWSFGV+LWE++T GA PYP + I YL G R+ +P
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 260
Query: 223 ASC 225
C
Sbjct: 261 EYC 263
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 135/261 (51%), Gaps = 55/261 (21%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P RL G+ LG G FG VV+ GL+ AAM VAVKMLK +A +
Sbjct: 43 FPRNRLSFGKTLGAGAFGKVVEATAYGLI--------KSDAAMTVAVKMLKPSAHLTERE 94
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLREE---------- 111
+ E+ ++ +G H +IV+ +G C LV+ EYC GDL ++LR +
Sbjct: 95 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 112 ----------------------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+L++ +HRDLA RNILL+ + KI DFGL
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 214
Query: 144 SEDIY-EQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
+ DI + N G + +LP++W+A ES+ + +YT +SDVWS+G+ LWE+ +LG++PYP
Sbjct: 215 ARDIKNDSNYVVKG--NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 272
Query: 203 HIPL-CRIVHYLSTGYRMERP 222
+P+ + + G+RM P
Sbjct: 273 GMPVDSKFYKMIKEGFRMLSP 293
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 135/261 (51%), Gaps = 55/261 (21%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P RL G+ LG G FG VV+ GL+ AAM VAVKMLK +A +
Sbjct: 38 FPRNRLSFGKTLGAGAFGKVVEATAYGLI--------KSDAAMTVAVKMLKPSAHLTERE 89
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLREE---------- 111
+ E+ ++ +G H +IV+ +G C LV+ EYC GDL ++LR +
Sbjct: 90 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 149
Query: 112 ----------------------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+L++ +HRDLA RNILL+ + KI DFGL
Sbjct: 150 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 209
Query: 144 SEDIY-EQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
+ DI + N G + +LP++W+A ES+ + +YT +SDVWS+G+ LWE+ +LG++PYP
Sbjct: 210 ARDIKNDSNYVVKG--NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 267
Query: 203 HIPL-CRIVHYLSTGYRMERP 222
+P+ + + G+RM P
Sbjct: 268 GMPVDSKFYKMIKEGFRMLSP 288
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 131/250 (52%), Gaps = 37/250 (14%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E++ L LGQG FG+V +G D G+A VAVK + +A + +FL E +
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDI----IKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE------------------ 110
+MK H H+V +G K + LVV E A GDL+SYLR
Sbjct: 72 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 130
Query: 111 ------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL+ K VHRDLA RN +++ VKI DFG++ DIYE + ++ G
Sbjct: 131 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR 218
LP+RW+A ESL ++T SD+WSFGVVLWEI +L PY + +++ ++ G
Sbjct: 191 G-LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 249
Query: 219 MERPASCNEQ 228
+++P +C E+
Sbjct: 250 LDQPDNCPER 259
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 131/250 (52%), Gaps = 37/250 (14%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E++ L LGQG FG+V +G D G+A VAVK + +A + +FL E +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDI----IKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE------------------ 110
+MK H H+V +G K + LVV E A GDL+SYLR
Sbjct: 73 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 111 ------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL+ K VHRDLA RN +++ VKI DFG++ DIYE + ++ G
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR 218
LP+RW+A ESL ++T SD+WSFGVVLWEI +L PY + +++ ++ G
Sbjct: 192 G-LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 250
Query: 219 MERPASCNEQ 228
+++P +C E+
Sbjct: 251 LDQPDNCPER 260
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 130/250 (52%), Gaps = 37/250 (14%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E++ L LGQG FG+V +G D G+A VAVK + +A + +FL E +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDI----IKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE------------------ 110
+MK H H+V +G K + LVV E A GDL+SYLR
Sbjct: 73 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 111 ------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL+ K VHRDLA RN +++ VKI DFG++ DIYE ++ G
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGK 191
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR 218
LP+RW+A ESL ++T SD+WSFGVVLWEI +L PY + +++ ++ G
Sbjct: 192 G-LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 250
Query: 219 MERPASCNEQ 228
+++P +C E+
Sbjct: 251 LDQPDNCPER 260
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 144 bits (362), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 131/250 (52%), Gaps = 37/250 (14%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E++ L LGQG FG+V +G D G+A VAVK + +A + +FL E +
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDI----IKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE------------------ 110
+MK H H+V +G K + LVV E A GDL+SYLR
Sbjct: 74 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 132
Query: 111 ------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL+ K VHR+LA RN +++ VKI DFG++ DIYE + ++ G
Sbjct: 133 MIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR 218
LP+RW+A ESL ++T SD+WSFGVVLWEI +L PY + +++ ++ G
Sbjct: 193 G-LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 251
Query: 219 MERPASCNEQ 228
+++P +C E+
Sbjct: 252 LDQPDNCPER 261
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 131/250 (52%), Gaps = 37/250 (14%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E++ L LGQG FG+V +G D G+A VAVK + +A + +FL E +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDI----IKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE------------------ 110
+MK H H+V +G K + LVV E A GDL+SYLR
Sbjct: 73 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 111 ------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL+ K VHR+LA RN +++ VKI DFG++ DIYE + ++ G
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR 218
LP+RW+A ESL ++T SD+WSFGVVLWEI +L PY + +++ ++ G
Sbjct: 192 G-LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 250
Query: 219 MERPASCNEQ 228
+++P +C E+
Sbjct: 251 LDQPDNCPER 260
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 143 bits (361), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 54/253 (21%)
Query: 16 EVLGQGEFGVVVKGLLG-DGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
+V+G+G FG V+K + DG M+ A+K +K A + F E+ ++ +
Sbjct: 31 DVIGEGNFGQVLKARIKKDG--------LRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 82
Query: 75 GKHDHIVSFIGCC-YKDELRLVVEYCALGDLQSYLRE----------------------- 110
G H +I++ +G C ++ L L +EY G+L +LR+
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 111 -------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS--EDIYEQNVFQN 155
+YLS + +HRDLA RNIL+ +V KI+DFGLS +++Y +
Sbjct: 143 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG- 201
Query: 156 GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
+LP+RW+A+ESL ++YT SDVWS+GV+LWEIV+LG PY + + L
Sbjct: 202 -----RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 256
Query: 216 GYRMERPASCNEQ 228
GYR+E+P +C+++
Sbjct: 257 GYRLEKPLNCDDE 269
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 16 EKITMSRELGQGSFGMVYEGVAKGVVKDEPE--------TRVAIKTVNEAASMRERIEFL 67
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 68 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 126
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN +++ VKI DFG++ DIYE + ++
Sbjct: 127 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 186
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 187 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 245
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 246 EGGLLDKPDNC 256
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 15 EKITMSRELGQGSFGMVYEGVAKGVVKDEPE--------TRVAIKTVNEAASMRERIEFL 66
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 67 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN +++ VKI DFG++ DIYE + ++
Sbjct: 126 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 185
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 186 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 244
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 245 EGGLLDKPDNC 255
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEP--------ETRVAIKTVNEAASMRERIEFL 63
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 64 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN +++ VKI DFG++ DIYE + ++
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 183 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 241
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 242 EGGLLDKPDNC 252
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPE--------TRVAIKTVNEAASMRERIEFL 76
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 77 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN +++ VKI DFG++ DIYE + ++
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 196 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 254
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 255 EGGLLDKPDNC 265
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPE--------TRVAIKTVNEAASMRERIEFL 69
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 70 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN +++ VKI DFG++ DIYE + ++
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 189 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 247
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 248 EGGLLDKPDNC 258
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 54/253 (21%)
Query: 16 EVLGQGEFGVVVKGLLG-DGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
+V+G+G FG V+K + DG M+ A+K +K A + F E+ ++ +
Sbjct: 21 DVIGEGNFGQVLKARIKKDG--------LRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 72
Query: 75 GKHDHIVSFIGCC-YKDELRLVVEYCALGDLQSYLRE----------------------- 110
G H +I++ +G C ++ L L +EY G+L +LR+
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 111 -------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS--EDIYEQNVFQN 155
+YLS + +HRDLA RNIL+ +V KI+DFGLS +++Y +
Sbjct: 133 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG- 191
Query: 156 GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
+LP+RW+A+ESL ++YT SDVWS+GV+LWEIV+LG PY + + L
Sbjct: 192 -----RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 246
Query: 216 GYRMERPASCNEQ 228
GYR+E+P +C+++
Sbjct: 247 GYRLEKPLNCDDE 259
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 134/261 (51%), Gaps = 55/261 (21%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+P RL G+ LG G FG VV+ GL+ AAM VAVKMLK +A +
Sbjct: 43 FPRNRLSFGKTLGAGAFGKVVEATAYGLI--------KSDAAMTVAVKMLKPSAHLTERE 94
Query: 63 KFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLREE---------- 111
+ E+ ++ +G H +IV+ +G C LV+ EYC GDL ++LR +
Sbjct: 95 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 112 ----------------------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+L++ +HRDLA RNILL+ + KI DFGL
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 214
Query: 144 SEDIY-EQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
+ I + N G + +LP++W+A ES+ + +YT +SDVWS+G+ LWE+ +LG++PYP
Sbjct: 215 ARHIKNDSNYVVKG--NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 272
Query: 203 HIPL-CRIVHYLSTGYRMERP 222
+P+ + + G+RM P
Sbjct: 273 GMPVDSKFYKMIKEGFRMLSP 293
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPE--------TRVAIKTVNEAASMRERIEFL 70
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 71 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN +++ VKI DFG++ DIYE + ++
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 189
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 190 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 248
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 249 EGGLLDKPDNC 259
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 143 bits (360), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPE--------TRVAIKTVNEAASMRERIEFL 69
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 70 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN +++ VKI DFG++ DIYE + ++
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 189 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 247
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 248 EGGLLDKPDNC 258
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 143 bits (360), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPE--------TRVAIKTVNEAASMRERIEFL 76
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 77 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 135
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN +++ VKI DFG++ DIYE + ++
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 196 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 254
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 255 EGGLLDKPDNC 265
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 47 EKITMSRELGQGSFGMVYEGVAKGVVKDEPE--------TRVAIKTVNEAASMRERIEFL 98
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 99 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 157
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN +++ VKI DFG++ DIYE + ++
Sbjct: 158 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 217
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 218 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 276
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 277 EGGLLDKPDNC 287
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 45/240 (18%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
+ L L + +G+GEFG V +LGD +VAVK +K +A A+ FL E +
Sbjct: 21 KELKLLQTIGKGEFGDV---MLGD--------YRGNKVAVKCIKNDATAQA---FLAEAS 66
Query: 70 LMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQSYLRE----------------- 110
+M + +H ++V +G +++ L +V EY A G L YLR
Sbjct: 67 VMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 125
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
EYL N VHRDLA RN+L+S +V K+SDFGL+++ + + + KLP++
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVK 179
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+L ++ KSDVWSFG++LWEI + G PYP IPL +V + GY+M+ P C
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC 239
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 22 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 75
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+++ G L Y+RE YL
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 194
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 195 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 246
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 128/251 (50%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEP--------ETRVAIKTVNEAASMRERIEFL 63
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 64 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN ++ VKI DFG++ DIYE + ++
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 183 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 241
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 242 EGGLLDKPDNC 252
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 21 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 74
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 193
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 129/246 (52%), Gaps = 33/246 (13%)
Query: 8 PPERLIL--GEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
P ER++ V+G+G FGVV G D Q ++ A+K L + + + FL
Sbjct: 17 PHERVVTHSDRVIGKGHFGVVYHGEYID------QAQNRIQCAIKSLSRITEMQQVEAFL 70
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQSYLRE------------- 110
+E LM+ + H ++++ IG E +++ Y GDL ++R
Sbjct: 71 REGLLMRGLN-HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF 129
Query: 111 --------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ-NGEPSEK 161
EYL+ K VHRDLA RN +L VK++DFGL+ DI ++ + +
Sbjct: 130 GLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189
Query: 162 LPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER 221
LP++W ALESL + +T KSDVWSFGV+LWE++T GA PY HI + H+L+ G R+ +
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ 249
Query: 222 PASCNE 227
P C +
Sbjct: 250 PEYCPD 255
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 45/240 (18%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
+ L L + +G+GEFG V +LGD +VAVK +K +A A+ FL E +
Sbjct: 193 KELKLLQTIGKGEFGDV---MLGD--------YRGNKVAVKCIKNDATAQA---FLAEAS 238
Query: 70 LMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQSYLRE----------------- 110
+M + +H ++V +G +++ L +V EY A G L YLR
Sbjct: 239 VMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 297
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
EYL N VHRDLA RN+L+S +V K+SDFGL+++ + + + KLP++
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVK 351
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+L ++ KSDVWSFG++LWEI + G PYP IPL +V + GY+M+ P C
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC 411
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 133/253 (52%), Gaps = 54/253 (21%)
Query: 16 EVLGQGEFGVVVKGLLG-DGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
+V+G+G FG V+K + DG M+ A+K +K A + F E+ ++ +
Sbjct: 28 DVIGEGNFGQVLKARIKKDG--------LRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 79
Query: 75 GKHDHIVSFIGCC-YKDELRLVVEYCALGDLQSYLRE----------------------- 110
G H +I++ +G C ++ L L +EY G+L +LR+
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 111 -------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS--EDIYEQNVFQN 155
+YLS + +HR+LA RNIL+ +V KI+DFGLS +++Y +
Sbjct: 140 QLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG- 198
Query: 156 GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
+LP+RW+A+ESL ++YT SDVWS+GV+LWEIV+LG PY + + L
Sbjct: 199 -----RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 253
Query: 216 GYRMERPASCNEQ 228
GYR+E+P +C+++
Sbjct: 254 GYRLEKPLNCDDE 266
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 129/250 (51%), Gaps = 37/250 (14%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E++ L LGQG FG+V +G D G+A VAVK + +A + +FL E +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDI----IKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE------------------ 110
+MK H H+V +G K + LVV E A GDL+SYLR
Sbjct: 73 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 111 ------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL+ K VHRDLA RN +++ VKI DFG++ DI E + + G
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR 218
LP+RW+A ESL ++T SD+WSFGVVLWEI +L PY + +++ ++ G
Sbjct: 192 G-LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 250
Query: 219 MERPASCNEQ 228
+++P +C E+
Sbjct: 251 LDQPDNCPER 260
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 45/240 (18%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
+ L L + +G+GEFG V +LGD +VAVK +K +A A+ FL E +
Sbjct: 12 KELKLLQTIGKGEFGDV---MLGD--------YRGNKVAVKCIKNDATAQA---FLAEAS 57
Query: 70 LMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQSYLRE----------------- 110
+M + +H ++V +G +++ L +V EY A G L YLR
Sbjct: 58 VMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 116
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
EYL N VHRDLA RN+L+S +V K+SDFGL+++ + + + KLP++
Sbjct: 117 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVK 170
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+L ++ KSDVWSFG++LWEI + G PYP IPL +V + GY+M+ P C
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC 230
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 129/250 (51%), Gaps = 37/250 (14%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E++ L LGQG FG+V +G D G+A VAVK + +A + +FL E +
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDI----IKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE------------------ 110
+MK H H+V +G K + LVV E A GDL+SYLR
Sbjct: 70 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 128
Query: 111 ------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL+ K VHRDLA RN +++ VKI DFG++ DI E + + G
Sbjct: 129 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 188
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR 218
LP+RW+A ESL ++T SD+WSFGVVLWEI +L PY + +++ ++ G
Sbjct: 189 G-LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 247
Query: 219 MERPASCNEQ 228
+++P +C E+
Sbjct: 248 LDQPDNCPER 257
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 45/240 (18%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
+ L L + +G+GEFG V +LGD +VAVK +K +A A+ FL E +
Sbjct: 6 KELKLLQTIGKGEFGDV---MLGD--------YRGNKVAVKCIKNDATAQA---FLAEAS 51
Query: 70 LMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQSYLRE----------------- 110
+M + +H ++V +G +++ L +V EY A G L YLR
Sbjct: 52 VMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 110
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
EYL N VHRDLA RN+L+S +V K+SDFGL+++ + + + KLP++
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVK 164
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+L ++ KSDVWSFG++LWEI + G PYP IPL +V + GY+M+ P C
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 129/250 (51%), Gaps = 37/250 (14%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E++ L LGQG FG+V +G D G+A VAVK + +A + +FL E +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDI----IKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE------------------ 110
+MK H H+V +G K + LVV E A GDL+SYLR
Sbjct: 73 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 111 ------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL+ K VHRDLA RN +++ VKI DFG++ DI E + + G
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR 218
LP+RW+A ESL ++T SD+WSFGVVLWEI +L PY + +++ ++ G
Sbjct: 192 G-LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 250
Query: 219 MERPASCNEQ 228
+++P +C E+
Sbjct: 251 LDQPDNCPER 260
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 24 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 77
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+++ G L Y+RE YL
Sbjct: 78 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 196
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 248
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 23 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 76
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+++ G L Y+RE YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 195
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 247
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 25 KVLGSGAFGTVYKGLWI---PEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 78
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+++ G L Y+RE YL
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 197
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 249
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 28 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 81
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 200
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 252
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 23 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 76
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 195
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 247
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 21 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+++ G L Y+RE YL
Sbjct: 76 -NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 193
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 22 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+++ G L Y+RE YL
Sbjct: 77 -NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 194
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 195 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 246
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 27 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 80
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 81 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 140
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 141 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 199
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 200 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 251
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 24 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 77
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 196
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 248
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 24 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 77
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 196
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 248
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 46 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 99
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 100 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 159
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 160 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 218
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 219 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 270
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 21 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 76 -NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 193
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 31 KVLGSGAFGTVYKGLWI---PEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 86 -NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 144
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 145 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 203
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 204 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 255
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 21 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 76 -NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 193
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 24 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 77
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 196
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 248
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 18 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 71
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 72 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE 131
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 132 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 190
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 191 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 242
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 140 bits (353), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 15 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 70 -NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 129 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 187
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 188 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 239
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 140 bits (353), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 125/235 (53%), Gaps = 34/235 (14%)
Query: 16 EVLGQGEFGVVVKGL-LGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
+VLG G FG V KG+ + DG + VA+K+L+ N K + L E +M V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGEN------VKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 75 GKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE---------------------EYL 113
G ++ +G C ++LV + G L ++RE YL
Sbjct: 77 GSP-YVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYL 135
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSE--DIYEQNVFQNGEPSEKLPIRWLALES 171
+ ++VHRDLA RN+L+ SP+ VKI+DFGL+ DI E +G K+PI+W+ALES
Sbjct: 136 EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG---KVPIKWMALES 192
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
++ +T++SDVWS+GV +WE++T GA PY IP I L G R+ +P C
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICT 247
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPE--------TRVAIKTVNEAASMRERIEFL 70
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 71 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN +++ VKI DFG++ DI E + +
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 190 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 248
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 249 EGGLLDKPDNC 259
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 45/251 (17%)
Query: 10 ERLILGEVLGQGEFGVV----VKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
E++ + LGQG FG+V KG++ D P VA+K + A + +FL
Sbjct: 10 EKITMSRELGQGSFGMVYEGVAKGVVKDEP--------ETRVAIKTVNEAASMRERIEFL 61
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE-------------- 110
E ++MK+ H H+V +G + + LV+ E GDL+SYLR
Sbjct: 62 NEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
YL+ NK VHRDLA RN +++ VKI DFG++ DI E + +
Sbjct: 121 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS 214
G LP+RW++ ESL ++T SDVWSFGVVLWEI TL PY + +++ ++
Sbjct: 181 KGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 239
Query: 215 TGYRMERPASC 225
G +++P +C
Sbjct: 240 EGGLLDKPDNC 250
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 23 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 76
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+++ G L Y+RE YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFG ++ + + + E K+PI+W+ALES++
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-GGKVPIKWMALESILH 195
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 247
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 23 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 76
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+++ G L Y+RE YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFG ++ + + + E K+PI+W+ALES++
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-GGKVPIKWMALESILH 195
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 247
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 25 KVLGSGAFGTVYKGLWI---PEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+++ G L Y+RE YL
Sbjct: 80 -NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFG ++ + + + E K+PI+W+ALES++
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-GGKVPIKWMALESILH 197
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 249
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VL G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 28 KVLSSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 81
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 200
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 252
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VL G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 28 KVLSSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 81
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+++ G L Y+RE YL
Sbjct: 82 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 200
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 252
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 28 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 81
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFG ++ + + + E K+PI+W+ALES++
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-GGKVPIKWMALESILH 200
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 252
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 23 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASV- 76
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFG ++ + + + E K+PI+W+ALES++
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-GGKVPIKWMALESILH 195
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 247
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+ L+ K + L E +M V
Sbjct: 55 KVLGSGAFGTVYKGLWI---PEGE--KVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 110 -NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 168
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 169 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 227
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 228 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 279
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 21 KVLGSGAFGTVYKGLW---IPEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 76 -NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFG ++ + + + E K+PI+W+ALES++
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-GGKVPIKWMALESILH 193
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VL G FG V KGL EG + + VA+K L+ K + L E +M V
Sbjct: 21 KVLSSGAFGTVYKGLWI---PEGE--KVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
+ H+ +G C ++L+ + G L Y+RE YL
Sbjct: 76 -NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ ++VHRDLA RN+L+ +P VKI+DFGL++ + + + E K+PI+W+ALES++
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-GGKVPIKWMALESILH 193
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
IYT++SDVWS+GV +WE++T G+ PY IP I L G R+ +P C
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 123/235 (52%), Gaps = 34/235 (14%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G GEFG V KG+L + +SG+ + VA+K LKA K FL E +M
Sbjct: 50 KVIGAGEFGEVYKGML-----KTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 76 KHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLREE---------------------YL 113
H+ I+ G K + ++ EY G L +LRE+ YL
Sbjct: 105 HHN-IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLS---EDIYEQNVFQNGEPSEKLPIRWLALE 170
+N VHRDLA RNIL++S V K+SDFGLS ED E +G K+PIRW A E
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG---KIPIRWTAPE 220
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
++ +T+ SDVWSFG+V+WE++T G PY + ++ ++ G+R+ P C
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDC 275
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 120/233 (51%), Gaps = 30/233 (12%)
Query: 16 EVLGQGEFGVVVKGL-LGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
+VLG G FG V KG+ + +G T + VA+K+L K +F+ E +M +
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGET------VKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 75 GKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YL 113
H H+V +G C ++LV + G L Y+ E YL
Sbjct: 98 -DHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 156
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV 173
++VHRDLA RN+L+ SP+ VKI+DFGL+ + E + + K+PI+W+ALE +
Sbjct: 157 EERRLVHRDLAARNVLVKSPNHVKITDFGLAR-LLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 174 SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
+T++SDVWS+GV +WE++T G PY IP I L G R+ +P C
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICT 268
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 120/233 (51%), Gaps = 30/233 (12%)
Query: 16 EVLGQGEFGVVVKGL-LGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
+VLG G FG V KG+ + +G T + VA+K+L K +F+ E +M +
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGET------VKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 75 GKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YL 113
H H+V +G C ++LV + G L Y+ E YL
Sbjct: 75 -DHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV 173
++VHRDLA RN+L+ SP+ VKI+DFGL+ + E + + K+PI+W+ALE +
Sbjct: 134 EERRLVHRDLAARNVLVKSPNHVKITDFGLAR-LLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 174 SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
+T++SDVWS+GV +WE++T G PY IP I L G R+ +P C
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICT 245
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 122/237 (51%), Gaps = 30/237 (12%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
ER+ LG +G+G+FG V +G+ + AM VA+K K +KFL+E
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYM------SPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE------------------ 111
M+ H HIV IG ++ + +++E C LG+L+S+L+
Sbjct: 64 TMRQFD-HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 112 ---YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + + VHRD+A RN+L+SS VK+ DFGLS Y ++ KLPI+W+A
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR--YMEDSTXXKASKGKLPIKWMA 180
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
ES+ +T+ SDVW FGV +WEI+ G P+ + ++ + G R+ P +C
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 124/237 (52%), Gaps = 30/237 (12%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
ER+ LG +G+G+FG V +G+ + AM VA+K K +KFL+E
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYM------SPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE------------------ 111
M+ H HIV IG ++ + +++E C LG+L+S+L+
Sbjct: 64 TMRQFD-HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 112 ---YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + + VHRD+A RN+L+SS VK+ DFGLS + + ++ + KLPI+W+A
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK--GKLPIKWMA 180
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
ES+ +T+ SDVW FGV +WEI+ G P+ + ++ + G R+ P +C
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 133 bits (335), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 127/249 (51%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 29 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 84
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 85 ALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG+++DIY + ++ G
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKG 203
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 204 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 263 GRMDPPKNC 271
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 133 bits (335), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 124/237 (52%), Gaps = 30/237 (12%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
ER+ LG +G+G+FG V +G+ + AM VA+K K +KFL+E
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYM------SPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE------------------ 111
M+ H HIV IG ++ + +++E C LG+L+S+L+
Sbjct: 444 TMRQFD-HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 112 ---YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + + VHRD+A RN+L+SS VK+ DFGLS + + ++ + KLPI+W+A
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG--KLPIKWMA 560
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
ES+ +T+ SDVW FGV +WEI+ G P+ + ++ + G R+ P +C
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 617
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 133 bits (334), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 127/249 (51%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 43 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 98
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ + H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 99 ALIISKL-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY + ++ G
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 218 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 277 GRMDPPKNC 285
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 133 bits (334), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 124/237 (52%), Gaps = 30/237 (12%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
ER+ LG +G+G+FG V +G+ + AM VA+K K +KFL+E
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYM------SPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE------------------ 111
M+ H HIV IG ++ + +++E C LG+L+S+L+
Sbjct: 64 TMRQFD-HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 112 ---YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + + VHRD+A RN+L+S+ VK+ DFGLS + + ++ + KLPI+W+A
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK--GKLPIKWMA 180
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
ES+ +T+ SDVW FGV +WEI+ G P+ + ++ + G R+ P +C
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 133 bits (334), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 127/249 (51%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 29 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 84
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ + H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 85 ALIISKL-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY + ++ G
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 204 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 263 GRMDPPKNC 271
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 133 bits (334), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 127/255 (49%), Gaps = 46/255 (18%)
Query: 12 LILGEVLGQGEFG-VVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINL 70
++L LG+G FG V + PT+ M VAVK LK A D F +E L
Sbjct: 17 IVLKRELGEGAFGKVFLAECYNLSPTKDK-----MLVAVKALKDPTLAARKD-FQREAEL 70
Query: 71 MKDVGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLREE------------------ 111
+ ++ +H+HIV F G C D L +V EY GDL +LR
Sbjct: 71 LTNL-QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 112 ------------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVF 153
YL++ VHRDLATRN L+ + +VKI DFG+S D+Y + +
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY 189
Query: 154 QNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYL 213
+ G + LPIRW+ ES++ +T +SDVWSFGV+LWEI T G P+ + ++ +
Sbjct: 190 RVGGHT-MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 248
Query: 214 STGYRMERPASCNEQ 228
+ G +ERP C ++
Sbjct: 249 TQGRVLERPRVCPKE 263
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 133 bits (334), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 126/249 (50%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 20 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 75
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 76 ALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 134
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY + ++ G
Sbjct: 135 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 194
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 195 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 253
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 254 GRMDPPKNC 262
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 124/237 (52%), Gaps = 30/237 (12%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
ER+ LG +G+G+FG V +G+ + AM VA+K K +KFL+E
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYM------SPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE------------------ 111
M+ H HIV IG ++ + +++E C LG+L+S+L+
Sbjct: 444 TMRQFD-HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 112 ---YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + + VHRD+A RN+L+S+ VK+ DFGLS + + ++ + KLPI+W+A
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG--KLPIKWMA 560
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
ES+ +T+ SDVW FGV +WEI+ G P+ + ++ + G R+ P +C
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 617
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 126/249 (50%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 45 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 100
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 101 ALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 159
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY + ++ G
Sbjct: 160 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 219
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 220 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 278
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 279 GRMDPPKNC 287
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 126/249 (50%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 43 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 98
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLV-VEYCALGDLQSYLRE---------------- 110
++ H +IV IG + R + +E A GDL+S+LRE
Sbjct: 99 ALIISKF-NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY + ++ G
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 218 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 277 GRMDPPKNC 285
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 126/249 (50%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 55 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 110
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 111 ALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 169
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY + ++ G
Sbjct: 170 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 229
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 230 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 288
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 289 GRMDPPKNC 297
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 126/249 (50%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 35 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 90
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 91 ALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 149
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY + ++ G
Sbjct: 150 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 209
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 210 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 268
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 269 GRMDPPKNC 277
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 126/249 (50%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 29 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 84
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 85 ALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY + ++ G
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 204 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 263 GRMDPPKNC 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 124/237 (52%), Gaps = 30/237 (12%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
ER+ LG +G+G+FG V +G+ + A+ VA+K K +KFL+E
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYM------SPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE------------------ 111
M+ H HIV IG ++ + +++E C LG+L+S+L+
Sbjct: 67 TMRQF-DHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 125
Query: 112 ---YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + + VHRD+A RN+L+SS VK+ DFGLS + + ++ + KLPI+W+A
Sbjct: 126 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK--GKLPIKWMA 183
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
ES+ +T+ SDVW FGV +WEI+ G P+ + ++ + G R+ P +C
Sbjct: 184 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 240
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 124/237 (52%), Gaps = 30/237 (12%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
ER+ LG +G+G+FG V +G+ + A+ VA+K K +KFL+E
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYM------SPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE------------------ 111
M+ H HIV IG ++ + +++E C LG+L+S+L+
Sbjct: 69 TMRQF-DHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 127
Query: 112 ---YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + + VHRD+A RN+L+SS VK+ DFGLS + + ++ + KLPI+W+A
Sbjct: 128 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK--GKLPIKWMA 185
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
ES+ +T+ SDVW FGV +WEI+ G P+ + ++ + G R+ P +C
Sbjct: 186 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 242
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 126/249 (50%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 83
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLV-VEYCALGDLQSYLRE---------------- 110
++ H +IV IG + R + +E A GDL+S+LRE
Sbjct: 84 ALIISKF-NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY + ++ G
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 203 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 261
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 262 GRMDPPKNC 270
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 126/249 (50%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 83
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 84 ALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY + ++ G
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 203 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 261
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 262 GRMDPPKNC 270
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 41/251 (16%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
++L LG+G FG V + E Q + VAVK LK +D D F +E L+
Sbjct: 15 IVLKRELGEGAFGKVFLAECYNLCPE----QDKILVAVKTLKDASDNARKD-FHREAELL 69
Query: 72 KDVGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLREE------------------- 111
++ +H+HIV F G C + D L +V EY GDL +LR
Sbjct: 70 TNL-QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 112 --------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGE 157
YL++ VHRDLATRN L+ +VKI DFG+S D+Y + ++ G
Sbjct: 129 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 158 PSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY 217
+ LPIRW+ ES++ +T +SDVWS GVVLWEI T G P+ + ++ ++ G
Sbjct: 189 HT-MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR 247
Query: 218 RMERPASCNEQ 228
++RP +C ++
Sbjct: 248 VLQRPRTCPQE 258
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 124/237 (52%), Gaps = 30/237 (12%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
ER+ LG +G+G+FG V +G+ + A+ VA+K K +KFL+E
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYM------SPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE------------------ 111
M+ H HIV IG ++ + +++E C LG+L+S+L+
Sbjct: 92 TMRQF-DHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 150
Query: 112 ---YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + + VHRD+A RN+L+SS VK+ DFGLS + + ++ + KLPI+W+A
Sbjct: 151 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK--GKLPIKWMA 208
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
ES+ +T+ SDVW FGV +WEI+ G P+ + ++ + G R+ P +C
Sbjct: 209 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 265
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 124/237 (52%), Gaps = 30/237 (12%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
ER+ LG +G+G+FG V +G+ + A+ VA+K K +KFL+E
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYM------SPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE------------------ 111
M+ H HIV IG ++ + +++E C LG+L+S+L+
Sbjct: 66 TMRQFD-HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 124
Query: 112 ---YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + + VHRD+A RN+L+SS VK+ DFGLS + + ++ + KLPI+W+A
Sbjct: 125 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK--GKLPIKWMA 182
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
ES+ +T+ SDVW FGV +WEI+ G P+ + ++ + G R+ P +C
Sbjct: 183 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 239
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 125/249 (50%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 124
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 125 ALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY ++ G
Sbjct: 184 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 243
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 244 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 302
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 303 GRMDPPKNC 311
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 125/249 (50%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 46 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVCSEQDELDFLME 101
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 102 ALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 160
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY ++ G
Sbjct: 161 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 220
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 221 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 279
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 280 GRMDPPKNC 288
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 124/237 (52%), Gaps = 30/237 (12%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
ER+ LG +G+G+FG V +G+ + A+ VA+K K +KFL+E
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYM------SPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE------------------ 111
M+ H HIV IG ++ + +++E C LG+L+S+L+
Sbjct: 61 TMRQFD-HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119
Query: 112 ---YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + + VHRD+A RN+L+SS VK+ DFGLS + + ++ + KLPI+W+A
Sbjct: 120 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK--GKLPIKWMA 177
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
ES+ +T+ SDVW FGV +WEI+ G P+ + ++ + G R+ P +C
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 234
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 122/250 (48%), Gaps = 43/250 (17%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
++L LG+G FG V + E Q M VAVK LK +++ D F +E L+
Sbjct: 43 IVLKWELGEGAFGKVFLAECHNLLPE----QDKMLVAVKALKEASESARQD-FQREAELL 97
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE------------------- 111
+ +H HIV F G C + L +V EY GDL +LR
Sbjct: 98 TML-QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 112 ----------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN 155
YL+ VHRDLATRN L+ VVKI DFG+S DIY + ++
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 216
Query: 156 GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
G + LPIRW+ ES++ +T +SDVWSFGVVLWEI T G P+ + + ++
Sbjct: 217 GGRT-MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 275
Query: 216 GYRMERPASC 225
G +ERP +C
Sbjct: 276 GRELERPRAC 285
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 124/237 (52%), Gaps = 30/237 (12%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
ER+ LG +G+G+FG V +G+ + A+ VA+K K +KFL+E
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYM------SPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE------------------ 111
M+ H HIV IG ++ + +++E C LG+L+S+L+
Sbjct: 64 TMRQFD-HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 112 ---YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + + VHRD+A RN+L+SS VK+ DFGLS + + ++ + KLPI+W+A
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK--GKLPIKWMA 180
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
ES+ +T+ SDVW FGV +WEI+ G P+ + ++ + G R+ P +C
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 122/250 (48%), Gaps = 43/250 (17%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
++L LG+G FG V + E Q M VAVK LK +++ D F +E L+
Sbjct: 20 IVLKWELGEGAFGKVFLAECHNLLPE----QDKMLVAVKALKEASESARQD-FQREAELL 74
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE------------------- 111
+ +H HIV F G C + L +V EY GDL +LR
Sbjct: 75 TML-QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 112 ----------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN 155
YL+ VHRDLATRN L+ VVKI DFG+S DIY + ++
Sbjct: 134 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 193
Query: 156 GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
G + LPIRW+ ES++ +T +SDVWSFGVVLWEI T G P+ + + ++
Sbjct: 194 GGRT-MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 252
Query: 216 GYRMERPASC 225
G +ERP +C
Sbjct: 253 GRELERPRAC 262
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 122/250 (48%), Gaps = 43/250 (17%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
++L LG+G FG V + E Q M VAVK LK +++ D F +E L+
Sbjct: 14 IVLKWELGEGAFGKVFLAECHNLLPE----QDKMLVAVKALKEASESARQD-FQREAELL 68
Query: 72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE------------------- 111
+ +H HIV F G C + L +V EY GDL +LR
Sbjct: 69 TML-QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 112 ----------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN 155
YL+ VHRDLATRN L+ VVKI DFG+S DIY + ++
Sbjct: 128 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 187
Query: 156 GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
G + LPIRW+ ES++ +T +SDVWSFGVVLWEI T G P+ + + ++
Sbjct: 188 GGRT-MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 246
Query: 216 GYRMERPASC 225
G +ERP +C
Sbjct: 247 GRELERPRAC 256
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 126/249 (50%), Gaps = 37/249 (14%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P + + L LG G FG V +G + P + + ++VAVK L + FL E
Sbjct: 43 PRKNITLIRGLGHGAFGEVYEGQVSGMPND----PSPLQVAVKTLPEVYSEQDELDFLME 98
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLRE---------------- 110
++ H +IV IG + R ++ E A GDL+S+LRE
Sbjct: 99 ALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 111 -----------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQNG 156
+YL N +HRD+A RN LL+ P V KI DFG++ DIY + ++ G
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
LP++W+ E+ + I+T+K+D WSFGV+LWEI +LG PYP ++ ++++G
Sbjct: 218 G-CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
Query: 217 YRMERPASC 225
RM+ P +C
Sbjct: 277 GRMDPPKNC 285
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 126/242 (52%), Gaps = 37/242 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P+ L + LG G+FGVV G + +VA+KM+K + ++ D+F++E
Sbjct: 23 PKDLTFLKELGTGQFGVVKYG----------KWRGQYDVAIKMIKEGSMSE--DEFIEEA 70
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------- 110
+M ++ H+ +V G C K + ++ EY A G L +YLRE
Sbjct: 71 KVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 129
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL + + +HRDLA RN L++ VVK+SDFGLS + + + K P+RW
Sbjct: 130 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--ETSSVGSKFPVRW 187
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
E L+ + +++KSD+W+FGV++WEI +LG PY +++ G R+ RP +
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS 247
Query: 227 EQ 228
E+
Sbjct: 248 EK 249
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KG+ EG S + V +K+++ + +++ + + +
Sbjct: 19 KVLGSGVFGTVHKGVW---IPEGES--IKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL- 72
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
H HIV +G C L+LV +Y LG L ++R+ YL
Sbjct: 73 DHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 132
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ +VHR+LA RN+LL SP V+++DFG++ D+ + Q K PI+W+ALES+
Sbjct: 133 EHGMVHRNLAARNVLLKSPSQVQVADFGVA-DLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
YT++SDVWS+GV +WE++T GA PY + L + L G R+ +P C
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICT 243
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 28/232 (12%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+VLG G FG V KG+ EG S + V +K+++ + +++ + + +
Sbjct: 37 KVLGSGVFGTVHKGVW---IPEGES--IKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL- 90
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------------YLS 114
H HIV +G C L+LV +Y LG L ++R+ YL
Sbjct: 91 DHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 150
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
+ +VHR+LA RN+LL SP V+++DFG++ D+ + Q K PI+W+ALES+
Sbjct: 151 EHGMVHRNLAARNVLLKSPSQVQVADFGVA-DLLPPDDKQLLYSEAKTPIKWMALESIHF 209
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
YT++SDVWS+GV +WE++T GA PY + L + L G R+ +P C
Sbjct: 210 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICT 261
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 37/242 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P+ L + LG G+FGVV G + +VA+KM+K + ++ D+F++E
Sbjct: 8 PKDLTFLKELGTGQFGVVKYG----------KWRGQYDVAIKMIKEGSMSE--DEFIEEA 55
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------- 110
+M ++ H+ +V G C K + ++ EY A G L +YLRE
Sbjct: 56 KVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 114
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL + + +HRDLA RN L++ VVK+SDFGLS + + K P+RW
Sbjct: 115 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--TSSRGSKFPVRW 172
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
E L+ + +++KSD+W+FGV++WEI +LG PY +++ G R+ RP +
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS 232
Query: 227 EQ 228
E+
Sbjct: 233 EK 234
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 122/238 (51%), Gaps = 33/238 (13%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E L+LGE +G+G FG V G L T VAVK + KFL+E
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTL---------VAVKSCRETLPPDLKAKFLQEAR 164
Query: 70 LMKDVGKHDHIVSFIG-CCYKDELRLVVEYCALGDLQSYLREE----------------- 111
++K H +IV IG C K + +V+E GD ++LR E
Sbjct: 165 ILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 112 ----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
YL + +HRDLA RN L++ +V+KISDFG+S + + V+ ++P++W
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD-GVYAASGGLRQVPVKWT 282
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
A E+L Y+++SDVWSFG++LWE +LGA+PYP++ + ++ G R+ P C
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELC 340
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 126 bits (317), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 37/242 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P+ L + LG G+FGVV G + +VA+KM+K + ++ D+F++E
Sbjct: 14 PKDLTFLKELGTGQFGVVKYG----------KWRGQYDVAIKMIKEGSMSE--DEFIEEA 61
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------- 110
+M ++ H+ +V G C K + ++ EY A G L +YLRE
Sbjct: 62 KVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 120
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL + + +HRDLA RN L++ VVK+SDFGLS + + K P+RW
Sbjct: 121 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--TSSVGSKFPVRW 178
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
E L+ + +++KSD+W+FGV++WEI +LG PY +++ G R+ RP +
Sbjct: 179 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS 238
Query: 227 EQ 228
E+
Sbjct: 239 EK 240
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 126 bits (317), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 128/246 (52%), Gaps = 45/246 (18%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P+ L + LG G+FGVV G + +VA+KM+K + ++ D+F++E
Sbjct: 23 PKDLTFLKELGTGQFGVVKYG----------KWRGQYDVAIKMIKEGSMSE--DEFIEEA 70
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------- 110
+M ++ H+ +V G C K + ++ EY A G L +YLRE
Sbjct: 71 KVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 129
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS----EDIYEQNVFQNGEPSEKL 162
EYL + + +HRDLA RN L++ VVK+SDFGLS +D Y +V K
Sbjct: 130 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV------GSKF 183
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
P+RW E L+ + +++KSD+W+FGV++WEI +LG PY +++ G R+ RP
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 243
Query: 223 ASCNEQ 228
+E+
Sbjct: 244 HLASEK 249
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 37/242 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P+ L + LG G+FGVV G + +VA+KM+K + ++ D+F++E
Sbjct: 3 PKDLTFLKELGTGQFGVVKYG----------KWRGQYDVAIKMIKEGSMSE--DEFIEEA 50
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------- 110
+M ++ H+ +V G C K + ++ EY A G L +YLRE
Sbjct: 51 KVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 109
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL + + +HRDLA RN L++ VVK+SDFGLS + + K P+RW
Sbjct: 110 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--TSSVGSKFPVRW 167
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
E L+ + +++KSD+W+FGV++WEI +LG PY +++ G R+ RP +
Sbjct: 168 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS 227
Query: 227 EQ 228
E+
Sbjct: 228 EK 229
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 37/242 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P+ L + LG G+FGVV G + +VA+KM+K + ++ D+F++E
Sbjct: 8 PKDLTFLKELGTGQFGVVKYG----------KWRGQYDVAIKMIKEGSMSE--DEFIEEA 55
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------- 110
+M ++ H+ +V G C K + ++ EY A G L +YLRE
Sbjct: 56 KVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 114
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL + + +HRDLA RN L++ VVK+SDFGLS + + K P+RW
Sbjct: 115 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--TSSVGSKFPVRW 172
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
E L+ + +++KSD+W+FGV++WEI +LG PY +++ G R+ RP +
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS 232
Query: 227 EQ 228
E+
Sbjct: 233 EK 234
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 37/242 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P+ L + LG G+FGVV G + +VA+KM+K + ++ D+F++E
Sbjct: 7 PKDLTFLKELGTGQFGVVKYG----------KWRGQYDVAIKMIKEGSMSE--DEFIEEA 54
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------- 110
+M ++ H+ +V G C K + ++ EY A G L +YLRE
Sbjct: 55 KVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 113
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL + + +HRDLA RN L++ VVK+SDFGLS + + K P+RW
Sbjct: 114 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--TSSVGSKFPVRW 171
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN 226
E L+ + +++KSD+W+FGV++WEI +LG PY +++ G R+ RP +
Sbjct: 172 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS 231
Query: 227 EQ 228
E+
Sbjct: 232 EK 233
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 124/268 (46%), Gaps = 59/268 (22%)
Query: 7 YPPERLILGEVLGQGEFGVVVK----GLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
YP + +G+G FG V + GLL P VAVKMLK A A
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFT--------MVAVKMLKEEASADMQA 95
Query: 63 KFLKEINLMKDVGKHDHIVSFIG-CCYKDELRLVVEYCALGDLQSYLRE----------- 110
F +E LM + + +IV +G C + L+ EY A GDL +LR
Sbjct: 96 DFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 154
Query: 111 ---------------------------------EYLSNNKVVHRDLATRNILLSSPHVVK 137
YLS K VHRDLATRN L+ VVK
Sbjct: 155 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVK 214
Query: 138 ISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
I+DFGLS +IY + ++ + ++ +PIRW+ ES+ N YT +SDVW++GVVLWEI + G
Sbjct: 215 IADFGLSRNIYSADYYK-ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273
Query: 198 ANPYPHIPLCRIVHYLSTGYRMERPASC 225
PY + +++Y+ G + P +C
Sbjct: 274 LQPYYGMAHEEVIYYVRDGNILACPENC 301
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 122/238 (51%), Gaps = 33/238 (13%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E L+LGE +G+G FG V G L T VAVK + KFL+E
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTL---------VAVKSCRETLPPDLKAKFLQEAR 164
Query: 70 LMKDVGKHDHIVSFIG-CCYKDELRLVVEYCALGDLQSYLREE----------------- 111
++K H +IV IG C K + +V+E GD ++LR E
Sbjct: 165 ILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 112 ----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
YL + +HRDLA RN L++ +V+KISDFG+S + + +G ++P++W
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGG-LRQVPVKWT 282
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
A E+L Y+++SDVWSFG++LWE +LGA+PYP++ + ++ G R+ P C
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELC 340
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 119/238 (50%), Gaps = 33/238 (13%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ + V+G GEFG V G L G+ + VA+K LK K FL E ++M
Sbjct: 24 ITIERVIGAGEFGEVCSGRLK------LPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 72 KDVGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE------------------ 110
G+ DH I+ G K + + +V EY G L ++L++
Sbjct: 78 ---GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIS 134
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW
Sbjct: 135 AGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 194
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
A E++ +T+ SDVWS+G+V+WE+V+ G PY + ++ + GYR+ P C
Sbjct: 195 APEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDC 252
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 122/243 (50%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L + LG G+FG V A+ +VAVK +K + + + FL E
Sbjct: 13 PRESLKLEKKLGAGQFGEVWM----------ATYNKHTKVAVKTMKPGS--MSVEAFLAE 60
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
N+MK + +HD +V K+ + ++ E+ A G L +L+ +
Sbjct: 61 ANVMKTL-QHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 119
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S+ V KI+DFGL+ + E N + E K PI+
Sbjct: 120 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR-VIEDNEYTARE-GAKFPIK 177
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC 237
Query: 226 NEQ 228
E+
Sbjct: 238 PEE 240
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 123/243 (50%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L + LG G+FG V A+ +VAVK +K + + + FL E
Sbjct: 186 PRESLKLEKKLGAGQFGEVWM----------ATYNKHTKVAVKTMKPGS--MSVEAFLAE 233
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
N+MK + +HD +V K+ + ++ E+ A G L +L+ +
Sbjct: 234 ANVMKTL-QHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 292
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S+ V KI+DFGL+ + E N + E + K PI+
Sbjct: 293 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR-VIEDNEYTAREGA-KFPIK 350
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC 410
Query: 226 NEQ 228
E+
Sbjct: 411 PEE 413
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 30/238 (12%)
Query: 10 ERLILGEV-LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
+ L++ ++ LG G FG V +G+ + ++VA+K+LK + ++ ++E
Sbjct: 9 DNLLIADIELGCGNFGSVRQGVY-------RMRKKQIDVAIKVLKQGTEKADTEEMMREA 61
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYL---REE-------------- 111
+M + + +IV IG C + L LV+E G L +L REE
Sbjct: 62 QIMHQLD-NPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS 120
Query: 112 ----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
YL VHRDLA RN+LL + H KISDFGLS+ + + + + K P++W
Sbjct: 121 MGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
A E + ++++SDVWS+GV +WE ++ G PY + ++ ++ G RME P C
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC 238
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 33/234 (14%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G GEFG V G L G+ + VA+K LKA K FL E ++M G
Sbjct: 35 KVIGVGEFGEVCSGRLK------VPGKREICVAIKTLKAGYTDKQRRDFLSEASIM---G 85
Query: 76 KHDH--IVSFIGCCYK-DELRLVVEYCALGDLQSYLRE---------------------E 111
+ DH I+ G K + ++ EY G L ++LR+ +
Sbjct: 86 QFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 145
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
YLS+ VHRDLA RNIL++S V K+SDFG+S + + K+PIRW A E+
Sbjct: 146 YLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+ +T+ SDVWS+G+V+WE+++ G PY + ++ + GYR+ P C
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 259
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 125/250 (50%), Gaps = 31/250 (12%)
Query: 2 ALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAK 59
+L+C + L L E LG G FGVV +G D P SG+ + VAVK LK + + +
Sbjct: 10 SLTCLIGEKDLRLLEKLGDGSFGVVRRGEW-DAP----SGKT-VSVAVKCLKPDVLSQPE 63
Query: 60 TYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE-------- 111
D F++E+N M + H +++ G +++V E LG L LR+
Sbjct: 64 AMDDFIREVNAMHSL-DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 112 -------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL + + +HRDLA RN+LL++ +VKI DFGL + + + +
Sbjct: 123 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 182
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST-GY 217
K+P W A ESL + +++ SD W FGV LWE+ T G P+ + +I+H + G
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 242
Query: 218 RMERPASCNE 227
R+ RP C +
Sbjct: 243 RLPRPEDCPQ 252
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 118/236 (50%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 49 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 100
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V EY G L S+LR+
Sbjct: 101 -GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW +
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 118/239 (49%), Gaps = 33/239 (13%)
Query: 11 RLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINL 70
R+ + +++G G+ G V G L GQ + VA+K LKA + FL E ++
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLR------VPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 71 MKDVGKHDH--IVSFIGCCYKDELRLVV-EYCALGDLQSYLRE----------------- 110
M G+ DH I+ G + L ++V EY G L ++LR
Sbjct: 104 M---GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
YLS+ VHRDLA RN+L+ S V K+SDFGLS + + K+PIRW
Sbjct: 161 GAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW 220
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
A E++ +++ SDVWSFGVV+WE++ G PY ++ ++ + GYR+ P C
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGC 279
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 123 bits (309), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 118/236 (50%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 20 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 71
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V EY G L S+LR+
Sbjct: 72 -GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW +
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 246
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 118/236 (50%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 37 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 88
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V EY G L S+LR+
Sbjct: 89 -GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW +
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 263
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 125/250 (50%), Gaps = 31/250 (12%)
Query: 2 ALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAK 59
+L+C + L L E LG G FGVV +G D P SG+ + VAVK LK + + +
Sbjct: 4 SLTCLIGEKDLRLLEKLGDGSFGVVRRGEW-DAP----SGKT-VSVAVKCLKPDVLSQPE 57
Query: 60 TYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE-------- 111
D F++E+N M + H +++ G +++V E LG L LR+
Sbjct: 58 AMDDFIREVNAMHSL-DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT 116
Query: 112 -------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL + + +HRDLA RN+LL++ +VKI DFGL + + + +
Sbjct: 117 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST-GY 217
K+P W A ESL + +++ SD W FGV LWE+ T G P+ + +I+H + G
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 236
Query: 218 RMERPASCNE 227
R+ RP C +
Sbjct: 237 RLPRPEDCPQ 246
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 33/234 (14%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G GEFG V G L G+ + VA+K LKA K FL E ++M G
Sbjct: 20 KVIGVGEFGEVCSGRLK------VPGKREICVAIKTLKAGYTDKQRRDFLSEASIM---G 70
Query: 76 KHDH--IVSFIGCCYK-DELRLVVEYCALGDLQSYLRE---------------------E 111
+ DH I+ G K + ++ EY G L ++LR+ +
Sbjct: 71 QFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 130
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
YLS+ VHRDLA RNIL++S V K+SDFG+S + + K+PIRW A E+
Sbjct: 131 YLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+ +T+ SDVWS+G+V+WE+++ G PY + ++ + GYR+ P C
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 244
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 125/250 (50%), Gaps = 31/250 (12%)
Query: 2 ALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAK 59
+L+C + L L E LG G FGVV +G D P SG+ + VAVK LK + + +
Sbjct: 10 SLTCLIGEKDLRLLEKLGDGSFGVVRRGEW-DAP----SGKT-VSVAVKCLKPDVLSQPE 63
Query: 60 TYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE-------- 111
D F++E+N M + H +++ G +++V E LG L LR+
Sbjct: 64 AMDDFIREVNAMHSL-DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 112 -------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL + + +HRDLA RN+LL++ +VKI DFGL + + + +
Sbjct: 123 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 182
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST-GY 217
K+P W A ESL + +++ SD W FGV LWE+ T G P+ + +I+H + G
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 242
Query: 218 RMERPASCNE 227
R+ RP C +
Sbjct: 243 RLPRPEDCPQ 252
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 33/234 (14%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G GEFG V G L G+ + VA+K LKA K FL E ++M G
Sbjct: 14 KVIGVGEFGEVCSGRLK------VPGKREICVAIKTLKAGYTDKQRRDFLSEASIM---G 64
Query: 76 KHDH--IVSFIGCCYK-DELRLVVEYCALGDLQSYLRE---------------------E 111
+ DH I+ G K + ++ EY G L ++LR+ +
Sbjct: 65 QFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 124
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
YLS+ VHRDLA RNIL++S V K+SDFG+S + + K+PIRW A E+
Sbjct: 125 YLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+ +T+ SDVWS+G+V+WE+++ G PY + ++ + GYR+ P C
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 238
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 118/236 (50%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 49 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 100
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V EY G L S+LR+
Sbjct: 101 -GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 118/236 (50%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 49 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 100
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V EY G L S+LR+
Sbjct: 101 -GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 118/236 (50%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 49 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 100
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V EY G L S+LR+
Sbjct: 101 -GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 118/236 (50%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 47 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 98
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V EY G L S+LR+
Sbjct: 99 -GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW +
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 217
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 273
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 125/250 (50%), Gaps = 31/250 (12%)
Query: 2 ALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAK 59
+L+C + L L E LG G FGVV +G D P SG+ + VAVK LK + + +
Sbjct: 4 SLTCLIGEKDLRLLEKLGDGSFGVVRRGEW-DAP----SGKT-VSVAVKCLKPDVLSQPE 57
Query: 60 TYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE-------- 111
D F++E+N M + H +++ G +++V E LG L LR+
Sbjct: 58 AMDDFIREVNAMHSL-DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT 116
Query: 112 -------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
YL + + +HRDLA RN+LL++ +VKI DFGL + + + +
Sbjct: 117 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST-GY 217
K+P W A ESL + +++ SD W FGV LWE+ T G P+ + +I+H + G
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 236
Query: 218 RMERPASCNE 227
R+ RP C +
Sbjct: 237 RLPRPEDCPQ 246
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 118/236 (50%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 49 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 100
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V EY G L S+LR+
Sbjct: 101 -GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 124/249 (49%), Gaps = 31/249 (12%)
Query: 3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAKT 60
L+C + L L E LG G FGVV +G D P SG+ + VAVK LK + + +
Sbjct: 1 LTCLIGEKDLRLLEKLGDGSFGVVRRGEW-DAP----SGKT-VSVAVKCLKPDVLSQPEA 54
Query: 61 YDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE--------- 111
D F++E+N M + H +++ G +++V E LG L LR+
Sbjct: 55 MDDFIREVNAMHSL-DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 112 ------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPS 159
YL + + +HRDLA RN+LL++ +VKI DFGL + + + +
Sbjct: 114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 173
Query: 160 EKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST-GYR 218
K+P W A ESL + +++ SD W FGV LWE+ T G P+ + +I+H + G R
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 233
Query: 219 MERPASCNE 227
+ RP C +
Sbjct: 234 LPRPEDCPQ 242
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 121/238 (50%), Gaps = 30/238 (12%)
Query: 10 ERLILGEV-LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
+ L++ ++ LG G FG V +G+ + ++VA+K+LK + ++ ++E
Sbjct: 335 DNLLIADIELGCGNFGSVRQGVY-------RMRKKQIDVAIKVLKQGTEKADTEEMMREA 387
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYL---REE-------------- 111
+M + + +IV IG C + L LV+E G L +L REE
Sbjct: 388 QIMHQL-DNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS 446
Query: 112 ----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
YL VHR+LA RN+LL + H KISDFGLS+ + + + + K P++W
Sbjct: 447 MGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 506
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
A E + ++++SDVWS+GV +WE ++ G PY + ++ ++ G RME P C
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC 564
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 123 bits (308), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 121/241 (50%), Gaps = 30/241 (12%)
Query: 6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
G E ++L +LG+G FG V +G+ + E + VAVK K + +KF+
Sbjct: 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGE------KINVAVKTCKKDCTLDNKEKFM 61
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE-------------- 111
E +MK++ H HIV IG ++ +++E G+L YL
Sbjct: 62 SEAVIMKNLD-HPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 120
Query: 112 -------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
YL + VHRD+A RNIL++SP VK+ DFGLS I +++ ++ +LPI
Sbjct: 121 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS--VTRLPI 178
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W++ ES+ +T SDVW F V +WEI++ G P+ + ++ L G R+ +P
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 238
Query: 225 C 225
C
Sbjct: 239 C 239
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 123 bits (308), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 121/241 (50%), Gaps = 30/241 (12%)
Query: 6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
G E ++L +LG+G FG V +G+ + E + VAVK K + +KF+
Sbjct: 20 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGE------KINVAVKTCKKDCTLDNKEKFM 73
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE-------------- 111
E +MK++ H HIV IG ++ +++E G+L YL
Sbjct: 74 SEAVIMKNLD-HPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 132
Query: 112 -------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
YL + VHRD+A RNIL++SP VK+ DFGLS I +++ ++ +LPI
Sbjct: 133 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS--VTRLPI 190
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W++ ES+ +T SDVW F V +WEI++ G P+ + ++ L G R+ +P
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 250
Query: 225 C 225
C
Sbjct: 251 C 251
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 123 bits (308), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 121/241 (50%), Gaps = 30/241 (12%)
Query: 6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
G E ++L +LG+G FG V +G+ + E + VAVK K + +KF+
Sbjct: 4 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGE------KINVAVKTCKKDCTLDNKEKFM 57
Query: 66 KEINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE-------------- 111
E +MK++ H HIV IG ++ +++E G+L YL
Sbjct: 58 SEAVIMKNLD-HPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 116
Query: 112 -------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
YL + VHRD+A RNIL++SP VK+ DFGLS I +++ ++ +LPI
Sbjct: 117 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS--VTRLPI 174
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W++ ES+ +T SDVW F V +WEI++ G P+ + ++ L G R+ +P
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 234
Query: 225 C 225
C
Sbjct: 235 C 235
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 118/239 (49%), Gaps = 33/239 (13%)
Query: 11 RLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINL 70
R+ + +++G G+ G V G L GQ + VA+K LKA + FL E ++
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLR------VPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 71 MKDVGKHDH--IVSFIGCCYKDELRLVV-EYCALGDLQSYLRE----------------- 110
M G+ DH I+ G + L ++V EY G L ++LR
Sbjct: 104 M---GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
YLS+ VHRDLA RN+L+ S V K+SDFGLS + + K+PIRW
Sbjct: 161 GAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
A E++ +++ SDVWSFGVV+WE++ G PY ++ ++ + GYR+ P C
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGC 279
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 124/249 (49%), Gaps = 31/249 (12%)
Query: 3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAKT 60
L+C + L L E LG G FGVV +G D P SG+ + VAVK LK + + +
Sbjct: 1 LTCLIGEKDLRLLEKLGDGSFGVVRRGEW-DAP----SGKT-VSVAVKCLKPDVLSQPEA 54
Query: 61 YDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE--------- 111
D F++E+N M + H +++ G +++V E LG L LR+
Sbjct: 55 MDDFIREVNAMHSL-DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 112 ------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPS 159
YL + + +HRDLA RN+LL++ +VKI DFGL + + + +
Sbjct: 114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 160 EKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST-GYR 218
K+P W A ESL + +++ SD W FGV LWE+ T G P+ + +I+H + G R
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 233
Query: 219 MERPASCNE 227
+ RP C +
Sbjct: 234 LPRPEDCPQ 242
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 124/249 (49%), Gaps = 31/249 (12%)
Query: 3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAKT 60
L+C + L L E LG G FGVV +G D P SG+ + VAVK LK + + +
Sbjct: 1 LTCLIGEKDLRLLEKLGDGSFGVVRRGEW-DAP----SGKT-VSVAVKCLKPDVLSQPEA 54
Query: 61 YDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE--------- 111
D F++E+N M + H +++ G +++V E LG L LR+
Sbjct: 55 MDDFIREVNAMHSL-DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 112 ------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPS 159
YL + + +HRDLA RN+LL++ +VKI DFGL + + + +
Sbjct: 114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 160 EKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST-GYR 218
K+P W A ESL + +++ SD W FGV LWE+ T G P+ + +I+H + G R
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 233
Query: 219 MERPASCNE 227
+ RP C +
Sbjct: 234 LPRPEDCPQ 242
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 118/236 (50%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 49 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 100
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V EY G L S+LR+
Sbjct: 101 -GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGL+ + + K+PIRW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGK 76
LG G FG V KG + VAVK+LK A D D+ L E N+M+ +
Sbjct: 377 LGSGNFGTVKKGYY-------QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-D 428
Query: 77 HDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNN 116
+ +IV IG C + LV+E LG L YL++ +YL +
Sbjct: 429 NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 488
Query: 117 KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VHRDLA RN+LL + H KISDFGLS+ + + + K P++W A E +
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 177 YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+++KSDVWSFGV++WE + G PY + + L G RM PA C
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 597
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGK 76
LG G FG V KG + VAVK+LK A D D+ L E N+M+ +
Sbjct: 378 LGSGNFGTVKKGYY-------QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-D 429
Query: 77 HDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNN 116
+ +IV IG C + LV+E LG L YL++ +YL +
Sbjct: 430 NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 489
Query: 117 KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VHRDLA RN+LL + H KISDFGLS+ + + + K P++W A E +
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 177 YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+++KSDVWSFGV++WE + G PY + + L G RM PA C
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 598
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 117/236 (49%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 49 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 100
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V EY G L S+LR+
Sbjct: 101 -GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGL + + K+PIRW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGK 76
LG G FG V KG + VAVK+LK A D D+ L E N+M+ +
Sbjct: 25 LGSGNFGTVKKGYY-------QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-D 76
Query: 77 HDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNN 116
+ +IV IG C + LV+E LG L YL++ +YL +
Sbjct: 77 NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 136
Query: 117 KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VHRDLA RN+LL + H KISDFGLS+ + + + K P++W A E +
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 177 YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+++KSDVWSFGV++WE + G PY + + L G RM PA C
Sbjct: 197 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 245
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 117/236 (49%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 49 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 100
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V E G L S+LR+
Sbjct: 101 -GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW +
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGK 76
LG G FG V KG + VAVK+LK A D D+ L E N+M+ +
Sbjct: 19 LGSGNFGTVKKGYY-------QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-D 70
Query: 77 HDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNN 116
+ +IV IG C + LV+E LG L YL++ +YL +
Sbjct: 71 NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 130
Query: 117 KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VHRDLA RN+LL + H KISDFGLS+ + + + K P++W A E +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 177 YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+++KSDVWSFGV++WE + G PY + + L G RM PA C
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 239
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGK 76
LG G FG V KG + VAVK+LK A D D+ L E N+M+ +
Sbjct: 13 LGSGNFGTVKKGYY-------QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-D 64
Query: 77 HDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNN 116
+ +IV IG C + LV+E LG L YL++ +YL +
Sbjct: 65 NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 124
Query: 117 KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VHRDLA RN+LL + H KISDFGLS+ + + + K P++W A E +
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 177 YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+++KSDVWSFGV++WE + G PY + + L G RM PA C
Sbjct: 185 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 233
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGK 76
LG G FG V KG + VAVK+LK A D D+ L E N+M+ +
Sbjct: 35 LGSGNFGTVKKGYY-------QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD- 86
Query: 77 HDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNN 116
+ +IV IG C + LV+E LG L YL++ +YL +
Sbjct: 87 NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 117 KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VHRDLA RN+LL + H KISDFGLS+ + + + K P++W A E +
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 177 YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+++KSDVWSFGV++WE + G PY + + L G RM PA C
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 255
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGK 76
LG G FG V KG + VAVK+LK A D D+ L E N+M+ +
Sbjct: 35 LGSGNFGTVKKGYY-------QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD- 86
Query: 77 HDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNN 116
+ +IV IG C + LV+E LG L YL++ +YL +
Sbjct: 87 NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 117 KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VHRDLA RN+LL + H KISDFGLS+ + + + K P++W A E +
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 177 YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+++KSDVWSFGV++WE + G PY + + L G RM PA C
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 255
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGK 76
LG G FG V KG + VAVK+LK A D D+ L E N+M+ +
Sbjct: 15 LGSGNFGTVKKGYY-------QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-D 66
Query: 77 HDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNN 116
+ +IV IG C + LV+E LG L YL++ +YL +
Sbjct: 67 NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 126
Query: 117 KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VHRDLA RN+LL + H KISDFGLS+ + + + K P++W A E +
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 177 YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+++KSDVWSFGV++WE + G PY + + L G RM PA C
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 235
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 123/244 (50%), Gaps = 38/244 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E + L + LG G+FG V G + + +VAVK LK + FL+E
Sbjct: 11 PRESIKLVKRLGAGQFGEVWMGYYNN----------STKVAVKTLKPGT--MSVQAFLEE 58
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE--------------- 111
NLMK + +HD +V ++E + ++ EY A G L +L+ +
Sbjct: 59 ANLMKTL-QHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA 117
Query: 112 -------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
Y+ +HRDL N+L+S + KI+DFGL+ I E N + E + K PI
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGA-KFPI 175
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A E++ +T KSDVWSFG++L+EIVT G PYP ++ LS GYRM R +
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVEN 235
Query: 225 CNEQ 228
C ++
Sbjct: 236 CPDE 239
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGK 76
LG G FG V KG + VAVK+LK A D D+ L E N+M+ +
Sbjct: 33 LGSGNFGTVKKGYY-------QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-D 84
Query: 77 HDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNN 116
+ +IV IG C + LV+E LG L YL++ +YL +
Sbjct: 85 NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 144
Query: 117 KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VHRDLA RN+LL + H KISDFGLS+ + + + K P++W A E +
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 177 YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+++KSDVWSFGV++WE + G PY + + L G RM PA C
Sbjct: 205 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 253
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 117/236 (49%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 20 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 71
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V E G L S+LR+
Sbjct: 72 -GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW +
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 246
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 120/243 (49%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 6 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 53
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 54 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 112
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I E N + E + K PI+
Sbjct: 113 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGA-KFPIK 170
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 230
Query: 226 NEQ 228
E+
Sbjct: 231 PEE 233
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 119/243 (48%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 21 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 68
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 69 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 127
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I E N + E K PI+
Sbjct: 128 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTARE-GAKFPIK 185
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 245
Query: 226 NEQ 228
E+
Sbjct: 246 PEE 248
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 117/236 (49%), Gaps = 33/236 (13%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ +V+G GEFG V G L + + VA+K LK K FL E ++M
Sbjct: 49 IDKVVGAGEFGEVCSGRLK------LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM-- 100
Query: 74 VGKHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------- 110
G+ DH I+ G K + + +V E G L S+LR+
Sbjct: 101 -GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YLS+ VHRDLA RNIL++S V K+SDFGLS + + K+PIRW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+VLWE+++ G PY + ++ + GYR+ P C
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 120/243 (49%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 17 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 64
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 65 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I E N + E + K PI+
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGA-KFPIK 181
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 241
Query: 226 NEQ 228
E+
Sbjct: 242 PEE 244
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 120/243 (49%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 16 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 63
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 64 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 122
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I E N + E + K PI+
Sbjct: 123 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGA-KFPIK 180
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 240
Query: 226 NEQ 228
E+
Sbjct: 241 PEE 243
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 120/243 (49%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 11 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 58
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 59 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I E N + E + K PI+
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGA-KFPIK 175
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 226 NEQ 228
E+
Sbjct: 236 PEE 238
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 33/235 (14%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
EV+G GEFG V +G L A G+ VA+K LK + +FL E ++M
Sbjct: 22 EVIGAGEFGEVCRGRLK------APGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF- 74
Query: 76 KHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLR---------------------EEYL 113
+H +I+ G + ++ E+ G L S+LR YL
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 134
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSE---KLPIRWLALE 170
+ VHRDLA RNIL++S V K+SDFGLS E+N E S K+PIRW A E
Sbjct: 135 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSR-FLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
++ +T+ SD WS+G+V+WE+++ G PY + +++ + YR+ P C
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDC 248
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 123/244 (50%), Gaps = 38/244 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E + L + LG G+FG V G + + +VAVK LK + FL+E
Sbjct: 10 PRESIKLVKKLGAGQFGEVWMGYYNN----------STKVAVKTLKPGT--MSVQAFLEE 57
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE--------------- 111
NLMK + +HD +V K+E + ++ E+ A G L +L+ +
Sbjct: 58 ANLMKTL-QHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA 116
Query: 112 -------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
Y+ +HRDL N+L+S + KI+DFGL+ I E N + E + K PI
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGA-KFPI 174
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS 224
+W A E++ +T KS+VWSFG++L+EIVT G PYP ++ LS GYRM R +
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMEN 234
Query: 225 CNEQ 228
C ++
Sbjct: 235 CPDE 238
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 117/243 (48%), Gaps = 47/243 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L + LG G+FG V A+ +VAVK +K + + + FL E
Sbjct: 180 PRESLKLEKKLGAGQFGEVWM----------ATYNKHTKVAVKTMKPGS--MSVEAFLAE 227
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
N+MK + +HD +V K+ + ++ E+ A G L +L+ +
Sbjct: 228 ANVMKTL-QHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 286
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S+ V KI+DFGL+ K PI+
Sbjct: 287 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR------------VGAKFPIK 334
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC 394
Query: 226 NEQ 228
E+
Sbjct: 395 PEE 397
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 111/229 (48%), Gaps = 29/229 (12%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGK 76
LG G FG V KG + VAVK+LK A D D+ L E N+M+ +
Sbjct: 19 LGSGNFGTVKKGYY-------QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-D 70
Query: 77 HDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNN 116
+ +IV IG C + LV+E LG L YL++ +YL +
Sbjct: 71 NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 130
Query: 117 KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VHRDLA RN+LL + H KISDFGLS+ + + K P++W A E +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 177 YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+++KSDVWSFGV++WE + G PY + + L G RM PA C
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 239
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 116/243 (47%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 19 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 66
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 67 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 125
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I + K PI+
Sbjct: 126 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIK 183
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 243
Query: 226 NEQ 228
E+
Sbjct: 244 PEE 246
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 33/233 (14%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGK 76
V+G GEFG V G L G+ + VA+K LK K FL E ++M G+
Sbjct: 50 VIGAGEFGEVCSGRLK------LPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIM---GQ 100
Query: 77 HDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------------EY 112
DH +V G + + + +V+E+ G L ++LR+ Y
Sbjct: 101 FDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRY 160
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
L++ VHRDLA RNIL++S V K+SDFGLS I + K+P+RW A E++
Sbjct: 161 LADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 173 VSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+T+ SDVWS+G+V+WE+++ G PY + ++ + GYR+ P C
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDC 273
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 120/243 (49%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 7 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 54
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 55 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 113
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HR+L NIL+S KI+DFGL+ I E N + E + K PI+
Sbjct: 114 IAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGA-KFPIK 171
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 231
Query: 226 NEQ 228
E+
Sbjct: 232 PEE 234
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 116/243 (47%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 17 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 64
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 65 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I + K PI+
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIK 181
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 241
Query: 226 NEQ 228
E+
Sbjct: 242 PEE 244
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 116/243 (47%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 20 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 67
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 68 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 126
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I + K PI+
Sbjct: 127 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIK 184
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 244
Query: 226 NEQ 228
E+
Sbjct: 245 PEE 247
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 116/243 (47%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 11 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 58
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 59 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I + K PI+
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIK 175
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 226 NEQ 228
E+
Sbjct: 236 PEE 238
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 116/243 (47%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 12 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 59
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 60 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 118
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I + K PI+
Sbjct: 119 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIK 176
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 236
Query: 226 NEQ 228
E+
Sbjct: 237 PEE 239
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 116/243 (47%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 11 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 58
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 59 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I + K PI+
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIK 175
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 226 NEQ 228
E+
Sbjct: 236 PEE 238
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 116/243 (47%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+FG V G +G T+ VAVK LK + + D FL E
Sbjct: 13 PRETLKLVERLGAGQFGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 60
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 61 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 119
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I + K PI+
Sbjct: 120 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX--TAREGAKFPIK 177
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 237
Query: 226 NEQ 228
E+
Sbjct: 238 PEE 240
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 37/237 (15%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G GEFG V G L G+ + VA+K LK+ K FL E ++M G
Sbjct: 39 QVIGAGEFGEVCSGHLK------LPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM---G 89
Query: 76 KHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------------E 111
+ DH ++ G K + ++ E+ G L S+LR+ +
Sbjct: 90 QFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMK 149
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLS---EDIYEQNVFQNGEPSEKLPIRWLA 168
YL++ VHRDLA RNIL++S V K+SDFGLS ED + + K+PIRW A
Sbjct: 150 YLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL-GGKIPIRWTA 208
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+V+WE+++ G PY + +++ + YR+ P C
Sbjct: 209 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDC 265
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 115/234 (49%), Gaps = 31/234 (13%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
EV+G GEFG V +G L A G+ VA+K LK + +FL E ++M
Sbjct: 20 EVIGAGEFGEVCRGRLK------APGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF- 72
Query: 76 KHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLR---------------------EEYL 113
+H +I+ G + ++ E+ G L S+LR YL
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPS--EKLPIRWLALES 171
+ VHRDLA RNIL++S V K+SDFGLS + E + S K+PIRW A E+
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
+ +T+ SD WS+G+V+WE+++ G PY + +++ + YR+ P C
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDC 246
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 129/251 (51%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 18 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 70
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ F+ EP E PI W A ESL
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES-PIFWYAPESL 189
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 249
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 250 RLPRPDGCPDE 260
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 89/140 (63%), Gaps = 12/140 (8%)
Query: 88 YKDELRLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI 147
YKD L L E+ Q E+L++ K +HRDLA RNILLS +VVKI DFGL+ DI
Sbjct: 184 YKDFLTL--EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 241
Query: 148 YEQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
Y+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 242 YKDPDYVRKGDA--RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 299
Query: 207 ----CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 300 DEEFCR---RLKEGTRMRAP 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 7 YPPERLILGEVLGQGEFGVVVKG-LLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
+P +RL LG+ LG+G FG V++ G T VAVKMLK A + +
Sbjct: 17 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKT-----ATCRTVAVKMLKEGATHSEHRALM 71
Query: 66 KEINLMKDVGKHDHIVSFIGCCYK--DELRLVVEYCALGDLQSYLREE 111
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR +
Sbjct: 72 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 119
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 89/140 (63%), Gaps = 12/140 (8%)
Query: 88 YKDELRLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI 147
YKD L L E+ Q E+L++ K +HRDLA RNILLS +VVKI DFGL+ DI
Sbjct: 193 YKDFLTL--EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 250
Query: 148 YEQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
Y+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 251 YKDPDYVRKGD--ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 308
Query: 207 ----CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 309 DEEFCR---RLKEGTRMRAP 325
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 26 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 81
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLREE 111
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR +
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 89/140 (63%), Gaps = 12/140 (8%)
Query: 88 YKDELRLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI 147
YKD L L E+ Q E+L++ K +HRDLA RNILLS +VVKI DFGL+ DI
Sbjct: 186 YKDFLTL--EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243
Query: 148 YEQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
Y+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 244 YKDPDYVRKGDA--RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 301
Query: 207 ----CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 302 DEEFCR---RLKEGTRMRAP 318
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 19 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 74
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLREE 111
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR +
Sbjct: 75 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 121
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 89/140 (63%), Gaps = 12/140 (8%)
Query: 88 YKDELRLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI 147
YKD L L E+ Q E+L++ K +HRDLA RNILLS +VVKI DFGL+ DI
Sbjct: 191 YKDFLTL--EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 248
Query: 148 YEQ-NVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL 206
Y+ + + G+ +LP++W+A E++ +YT +SDVWSFGV+LWEI +LGA+PYP + +
Sbjct: 249 YKDPDYVRKGDA--RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 306
Query: 207 ----CRIVHYLSTGYRMERP 222
CR L G RM P
Sbjct: 307 DEEFCR---RLKEGTRMRAP 323
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+P +RL LG+ LG+G FG V++ G + A+ + VAVKMLK A + +
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRT---VAVKMLKEGATHSEHRALMS 79
Query: 67 EINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLREE 111
E+ ++ +G H ++V+ +G C K L ++VE+C G+L +YLR +
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 78/114 (68%), Gaps = 4/114 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ-NVFQNGEPSEKLPIRWLAL 169
E+LS+ K +HRDLA RNILLS +VVKI DFGL+ DIY+ + + G+ +LP++W+A
Sbjct: 213 EFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD--TRLPLKWMAP 270
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCR-IVHYLSTGYRMERP 222
ES+ IY+ KSDVWS+GV+LWEI +LG +PYP + + L G RM P
Sbjct: 271 ESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAP 324
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 16/123 (13%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGL---LGDGPTEGASGQAAMEVAVKMLKANADAKTYDK 63
+ ERL LG+ LG+G FG VV+ + PT VAVKMLK A A Y
Sbjct: 24 FARERLKLGKSLGRGAFGKVVQASAFGIKKSPT-------CRTVAVKMLKEGATASEYKA 76
Query: 64 FLKEINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLREE----YLSNNK 117
+ E+ ++ +G H ++V+ +G C K L ++VEYC G+L +YL+ + +L+ +
Sbjct: 77 LMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDA 136
Query: 118 VVH 120
+H
Sbjct: 137 ALH 139
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 116/243 (47%), Gaps = 37/243 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L E LG G+ G V G +G T+ VAVK LK + + D FL E
Sbjct: 11 PRETLKLVERLGAGQAGEVWMGYY-NGHTK---------VAVKSLKQGSMSP--DAFLAE 58
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
NLMK + +H +V ++ + ++ EY G L +L+
Sbjct: 59 ANLMKQL-QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
++ +HRDL NIL+S KI+DFGL+ I ++ K PI+
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIK 175
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E++ +T KSDVWSFG++L EIVT G PYP + ++ L GYRM RP +C
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 226 NEQ 228
E+
Sbjct: 236 PEE 238
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 113/223 (50%), Gaps = 43/223 (19%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
E LG+ FG V KG L GP G QA VA+K LK A+ ++F E L +
Sbjct: 15 EELGEDRFGKVYKGHLF-GPAPGEQTQA---VAIKTLKDKAEGPLREEFRHEAMLRARL- 69
Query: 76 KHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYL-------------------------- 108
+H ++V +G KD+ L ++ YC+ GDL +L
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 109 ----------REEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
EYLS++ VVH+DLATRN+L+ VKISD GL ++Y + ++
Sbjct: 130 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
S LPIRW+A E+++ ++ SD+WS+GVVLWE+ + G PY
Sbjct: 190 S-LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 113/223 (50%), Gaps = 43/223 (19%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
E LG+ FG V KG L GP G QA VA+K LK A+ ++F E L +
Sbjct: 32 EELGEDRFGKVYKGHLF-GPAPGEQTQA---VAIKTLKDKAEGPLREEFRHEAMLRARL- 86
Query: 76 KHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYL-------------------------- 108
+H ++V +G KD+ L ++ YC+ GDL +L
Sbjct: 87 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 146
Query: 109 ----------REEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
EYLS++ VVH+DLATRN+L+ VKISD GL ++Y + ++
Sbjct: 147 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
S LPIRW+A E+++ ++ SD+WS+GVVLWE+ + G PY
Sbjct: 207 S-LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 37/237 (15%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G GEFG V G L G+ + VA+K LK+ K FL E ++M G
Sbjct: 13 QVIGAGEFGEVCSGHLK------LPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM---G 63
Query: 76 KHDH--IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------------E 111
+ DH ++ G K + ++ E+ G L S+LR+ +
Sbjct: 64 QFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMK 123
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLS---EDIYEQNVFQNGEPSEKLPIRWLA 168
YL++ VHR LA RNIL++S V K+SDFGLS ED + + K+PIRW A
Sbjct: 124 YLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL-GGKIPIRWTA 182
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
E++ +T+ SDVWS+G+V+WE+++ G PY + +++ + YR+ P C
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDC 239
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 49 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 101
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 161
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 220
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 221 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 280
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 281 RLPRPDGCPDE 291
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 22 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 74
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 193
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 194 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 253
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 254 RLPRPDGCPDE 264
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 36 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 88
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 207
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 267
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 268 RLPRPDGCPDE 278
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 17 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 69
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 70 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 129
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 188
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 189 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 248
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 249 RLPRPDGCPDE 259
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 37/235 (15%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E + L + LG G+FGVV G + +VAVKM+K + ++ D+F +E
Sbjct: 8 EEITLLKELGSGQFGVVKLG----------KWKGQYDVAVKMIKEGSMSE--DEFFQEAQ 55
Query: 70 LMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLREE----------------- 111
M + H +V F G C K+ + +V EY + G L +YLR
Sbjct: 56 TMMKLS-HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVC 114
Query: 112 ----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+L +++ +HRDLA RN L+ VK+SDFG++ + + + K P++W
Sbjct: 115 EGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS--VGTKFPVKWS 172
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
A E Y++KSDVW+FG+++WE+ +LG PY +V +S G+R+ RP
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP 227
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 16 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 68
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 187
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 188 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 247
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 248 RLPRPDGCPDE 258
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 36 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 88
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 207
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 267
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 268 RLPRPDGCPDE 278
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 18 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 70
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 189
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 249
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 250 RLPRPDGCPDE 260
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 18 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 70
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 189
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 249
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 250 RLPRPDGCPDE 260
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 24 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 76
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 136
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 195
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 196 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 255
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 256 RLPRPDGCPDE 266
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 25 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 77
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 78 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 137
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 196
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 197 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 256
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 257 RLPRPDGCPDE 267
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 21 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 73
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 192
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 252
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 253 RLPRPDGCPDE 263
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 23 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 75
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 135
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 194
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 195 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 254
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 255 RLPRPDGCPDE 265
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 129/251 (51%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 19 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 71
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL++ EYL
Sbjct: 72 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 131
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HR+LATRNIL+ + + VKI DFGL++ + ++ ++ EP E PI W A ESL
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES-PIFWYAPESL 190
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 191 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 250
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 251 RLPRPDGCPDE 261
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 127/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 21 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 73
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++EY G L+ YL+ EYL
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 192
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 252
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 253 RLPRPDGCPDE 263
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 128/251 (50%), Gaps = 48/251 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V + P + +G+ VAVK L+ + + D F +EI ++K + +H
Sbjct: 21 LGKGNFGSV--EMCRYDPLQDNTGEV---VAVKKLQHSTEEHLRD-FEREIEILKSL-QH 73
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D+IV + G CY + L+L++E+ G L+ YL++ EYL
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ +HRDLATRNIL+ + + VKI DFGL++ + ++ + EP E PI W A ESL
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-PIFWYAPESL 192
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT---------------LGANPYPHIPLCRIVHYLSTGY 217
+ ++ SDVWSFGVVL+E+ T +G + + + ++ L
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 252
Query: 218 RMERPASCNEQ 228
R+ RP C ++
Sbjct: 253 RLPRPDGCPDE 263
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 113/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 16 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 63
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 64 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDLA NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 123 IASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 180
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 226 NE 227
E
Sbjct: 241 PE 242
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 113/240 (47%), Gaps = 37/240 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L + LG G+FG V G + +VA+K LK + + FL+E
Sbjct: 7 PRESLQLIKRLGNGQFGEVWMG----------TWNGNTKVAIKTLKPGTMSP--ESFLEE 54
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE----------------- 110
+MK + KHD +V ++ + +V EY G L +L++
Sbjct: 55 AQIMKKL-KHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQ 113
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ +HRDL + NIL+ + + KI+DFGL+ I + K PI+
Sbjct: 114 VAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEX--TARQGAKFPIK 171
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+VT G PYP + ++ + GYRM P C
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDC 231
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 116/244 (47%), Gaps = 42/244 (17%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V L PT +G+ VAVK LKA+A + + +EI++++ + H
Sbjct: 39 LGEGHFGKV--SLYCYDPTNDGTGEM---VAVKALKADAGPQHRSGWKQEIDILRTL-YH 92
Query: 78 DHIVSFIGCCYKD---ELRLVVEYCALGDLQSYLREE-------------------YLSN 115
+HI+ + GCC L+LV+EY LG L+ YL YL
Sbjct: 93 EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA 152
Query: 116 NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN 175
+HRDLA RN+LL + +VKI DFGL++ + E + P+ W A E L
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 176 IYTNKSDVWSFGVVLWEIVT-LGANPYP-------------HIPLCRIVHYLSTGYRMER 221
+ SDVWSFGV L+E++T ++ P + + R+ L G R+ R
Sbjct: 213 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR 272
Query: 222 PASC 225
P C
Sbjct: 273 PDKC 276
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 118/244 (48%), Gaps = 42/244 (17%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V L PT +G+ VAVK LKA+ + + +EI++++ + H
Sbjct: 22 LGEGHFGKV--SLYCYDPTNDGTGEM---VAVKALKADCGPQHRSGWKQEIDILRTL-YH 75
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLREE-------------------YLSN 115
+HI+ + GCC + L+LV+EY LG L+ YL YL +
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 116 NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN 175
+HR+LA RN+LL + +VKI DFGL++ + E + + P+ W A E L
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 176 IYTNKSDVWSFGVVLWEIVT-LGANPYP-------------HIPLCRIVHYLSTGYRMER 221
+ SDVWSFGV L+E++T ++ P + + R+ L G R+ R
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR 255
Query: 222 PASC 225
P C
Sbjct: 256 PDKC 259
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 16 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 63
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V+EY + G L +L+ E
Sbjct: 64 AQVMKKL-RHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 180
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 226 NE 227
E
Sbjct: 241 PE 242
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 16 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 63
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 64 AQVMKKI-RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 180
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 226 NE 227
E
Sbjct: 241 PE 242
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 114/244 (46%), Gaps = 42/244 (17%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V L PT +G+ VAVK LK + + +EI +++ + H
Sbjct: 16 LGEGHFGKV--SLYCYDPTNDGTGEM---VAVKALKEGCGPQLRSGWQREIEILRTL-YH 69
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLREE-------------------YLSN 115
+HIV + GCC + ++LV+EY LG L+ YL YL
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHA 129
Query: 116 NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN 175
+HR LA RN+LL + +VKI DFGL++ + E + + P+ W A E L
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 176 IYTNKSDVWSFGVVLWEIVT-LGANPYPH-------------IPLCRIVHYLSTGYRMER 221
+ SDVWSFGV L+E++T +N PH + + R+ L G R+ R
Sbjct: 190 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPR 249
Query: 222 PASC 225
P C
Sbjct: 250 PDRC 253
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 114/244 (46%), Gaps = 42/244 (17%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V L PT +G+ VAVK LK + + +EI +++ + H
Sbjct: 17 LGEGHFGKV--SLYCYDPTNDGTGEM---VAVKALKEGCGPQLRSGWQREIEILRTL-YH 70
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLREE-------------------YLSN 115
+HIV + GCC + ++LV+EY LG L+ YL YL
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHA 130
Query: 116 NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN 175
+HR LA RN+LL + +VKI DFGL++ + E + + P+ W A E L
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 176 IYTNKSDVWSFGVVLWEIVT-LGANPYPH-------------IPLCRIVHYLSTGYRMER 221
+ SDVWSFGV L+E++T +N PH + + R+ L G R+ R
Sbjct: 191 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPR 250
Query: 222 PASC 225
P C
Sbjct: 251 PDRC 254
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 117/244 (47%), Gaps = 42/244 (17%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V L PT +G+ VAVK LKA+ + + +EI++++ + H
Sbjct: 22 LGEGHFGKV--SLYCYDPTNDGTGEM---VAVKALKADCGPQHRSGWKQEIDILRTL-YH 75
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLREE-------------------YLSN 115
+HI+ + GCC + L+LV+EY LG L+ YL YL
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 116 NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN 175
+HR+LA RN+LL + +VKI DFGL++ + E + + P+ W A E L
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 176 IYTNKSDVWSFGVVLWEIVT-LGANPYP-------------HIPLCRIVHYLSTGYRMER 221
+ SDVWSFGV L+E++T ++ P + + R+ L G R+ R
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR 255
Query: 222 PASC 225
P C
Sbjct: 256 PDKC 259
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 37/236 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P L + +G G+FG+V G + +VA+K ++ A ++ + F++E
Sbjct: 6 PSELTFVQEIGSGQFGLVHLGYWLNKD----------KVAIKTIREGAMSE--EDFIEEA 53
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE---------------- 111
+M + H +V G C + + LV E+ G L YLR +
Sbjct: 54 EVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 112
Query: 112 -----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
YL V+HRDLA RN L+ V+K+SDFG++ + + K P++W
Sbjct: 113 CEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKW 170
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
+ E + Y++KSDVWSFGV++WE+ + G PY + +V +STG+R+ +P
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 226
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 37/236 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P L + +G G+FG+V G + +VA+K +K + ++ D F++E
Sbjct: 26 PSELTFVQEIGSGQFGLVHLGYWLNKD----------KVAIKTIKEGSMSE--DDFIEEA 73
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE---------------- 111
+M + H +V G C + + LV E+ G L YLR +
Sbjct: 74 EVMMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 132
Query: 112 -----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
YL V+HRDLA RN L+ V+K+SDFG++ + + K P++W
Sbjct: 133 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKW 190
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
+ E + Y++KSDVWSFGV++WE+ + G PY + +V +STG+R+ +P
Sbjct: 191 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 246
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 111/242 (45%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 16 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 63
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V+EY + G L +L+ E
Sbjct: 64 AQVMKKL-RHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I + K PI+
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX--TARQGAKFPIK 180
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 226 NE 227
E
Sbjct: 241 PE 242
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 16 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 63
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 64 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 180
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 226 NE 227
E
Sbjct: 241 PE 242
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 5 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 52
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 53 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 111
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 112 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 169
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 170 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 229
Query: 226 NE 227
E
Sbjct: 230 PE 231
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 182 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 229
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 230 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 346
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 406
Query: 226 NE 227
E
Sbjct: 407 PE 408
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 265 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 312
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 313 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 371
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 372 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 429
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 489
Query: 226 NE 227
E
Sbjct: 490 PE 491
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 182 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 229
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 230 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 346
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 406
Query: 226 NE 227
E
Sbjct: 407 PE 408
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 9 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 56
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 57 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 115
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 116 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 173
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 174 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 233
Query: 226 NE 227
E
Sbjct: 234 PE 235
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 7 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 54
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 55 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 113
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 114 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 171
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 231
Query: 226 NE 227
E
Sbjct: 232 PE 233
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 16 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 63
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 64 AQVMKKL-RHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 180
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 226 NE 227
E
Sbjct: 241 PE 242
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 110/242 (45%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 6 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 53
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 54 AQVMKKL-RHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 112
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I + K PI+
Sbjct: 113 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX--TARQGAKFPIK 170
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 171 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 230
Query: 226 NE 227
E
Sbjct: 231 PE 232
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 37/236 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P L + +G G+FG+V G + +VA+K ++ A ++ + F++E
Sbjct: 4 PSELTFVQEIGSGQFGLVHLGYWLNKD----------KVAIKTIREGAMSE--EDFIEEA 51
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE---------------- 111
+M + H +V G C + + LV E+ G L YLR +
Sbjct: 52 EVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 110
Query: 112 -----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
YL V+HRDLA RN L+ V+K+SDFG++ + + K P++W
Sbjct: 111 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKW 168
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
+ E + Y++KSDVWSFGV++WE+ + G PY + +V +STG+R+ +P
Sbjct: 169 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 224
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 37/236 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P L + +G G+FG+V G + +VA+K ++ A ++ + F++E
Sbjct: 7 PSELTFVQEIGSGQFGLVHLGYWLNKD----------KVAIKTIREGAMSE--EDFIEEA 54
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE---------------- 111
+M + H +V G C + + LV E+ G L YLR +
Sbjct: 55 EVMMKLS-HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 113
Query: 112 -----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
YL V+HRDLA RN L+ V+K+SDFG++ + + K P++W
Sbjct: 114 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKW 171
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
+ E + Y++KSDVWSFGV++WE+ + G PY + +V +STG+R+ +P
Sbjct: 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 227
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 37/236 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P L + +G G+FG+V G + +VA+K ++ A ++ + F++E
Sbjct: 6 PSELTFVQEIGSGQFGLVHLGYWLNKD----------KVAIKTIREGAMSE--EDFIEEA 53
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE---------------- 111
+M + H +V G C + + LV E+ G L YLR +
Sbjct: 54 EVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 112
Query: 112 -----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
YL V+HRDLA RN L+ V+K+SDFG++ + + K P++W
Sbjct: 113 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKW 170
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
+ E + Y++KSDVWSFGV++WE+ + G PY + +V +STG+R+ +P
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 226
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 37/236 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P L + +G G+FG+V G + +VA+K ++ A ++ + F++E
Sbjct: 9 PSELTFVQEIGSGQFGLVHLGYWLNKD----------KVAIKTIREGAMSE--EDFIEEA 56
Query: 69 NLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE---------------- 111
+M + H +V G C + + LV E+ G L YLR +
Sbjct: 57 EVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 115
Query: 112 -----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
YL V+HRDLA RN L+ V+K+SDFG++ + + K P++W
Sbjct: 116 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKW 173
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP 222
+ E + Y++KSDVWSFGV++WE+ + G PY + +V +STG+R+ +P
Sbjct: 174 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 229
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 107 bits (266), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 111/242 (45%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 13 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 60
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY G L +L+ E
Sbjct: 61 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 120 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 177
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 237
Query: 226 NE 227
E
Sbjct: 238 PE 239
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 16 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 63
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V+EY + G L +L+ E
Sbjct: 64 AQVMKKL-RHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 180
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 226 NE 227
E
Sbjct: 241 PE 242
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 16 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 63
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 64 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 123 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 180
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 226 NE 227
E
Sbjct: 241 PE 242
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 111/242 (45%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 183 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGNMSP--EAFLQE 230
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 231 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 289
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL I E N + K PI+
Sbjct: 290 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLI-EDNEY-TARQGAKFPIK 347
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 348 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 407
Query: 226 NE 227
E
Sbjct: 408 PE 409
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 106 bits (265), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 182 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 229
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY + G L +L+ E
Sbjct: 230 AQVMKKL-RHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 289 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEY-TARQGAKFPIK 346
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 406
Query: 226 NE 227
E
Sbjct: 407 PE 408
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 111/242 (45%), Gaps = 37/242 (15%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E L L LGQG FG V G + VA+K LK + + FL+E
Sbjct: 13 PRESLRLEVKLGQGCFGEVWMG----------TWNGTTRVAIKTLKPGTMSP--EAFLQE 60
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE---------------- 111
+MK + +H+ +V ++ + +V EY G L +L+ E
Sbjct: 61 AQVMKKL-RHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y+ VHRDL NIL+ V K++DFGL+ I E N + K PI+
Sbjct: 120 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEW-TARQGAKFPIK 177
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC 225
W A E+ + +T KSDVWSFG++L E+ T G PYP + ++ + GYRM P C
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 237
Query: 226 NE 227
E
Sbjct: 238 PE 239
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 125/247 (50%), Gaps = 47/247 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V L P +G VAVK L+ + + D F +EI ++K +
Sbjct: 15 LGKGNFGSV--ELCRYDPLGDNTGAL---VAVKQLQHSGPDQQRD-FQREIQILKAL-HS 67
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D IV + G Y + ELRLV+EY G L+ +L+ EYL
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 127
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ + VHRDLA RNIL+ S VKI+DFGL++ + +++ EP + PI W A ESL
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS-PIFWYAPESL 186
Query: 173 VSNIYTNKSDVWSFGVVLWEIVTL---GANPYPH----------IP-LCRIVHYLSTGYR 218
NI++ +SDVWSFGVVL+E+ T +P +P LCR++ L G R
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQR 246
Query: 219 MERPASC 225
+ P +C
Sbjct: 247 LPAPPAC 253
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 125/247 (50%), Gaps = 47/247 (19%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V L P +G VAVK L+ + + D F +EI ++K +
Sbjct: 19 LGKGNFGSVE--LCRYDPLGDNTGAL---VAVKQLQHSGPDQQRD-FQREIQILKAL-HS 71
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D IV + G Y + LRLV+EY G L+ +L+ EYL
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 131
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ + VHRDLA RNIL+ S VKI+DFGL++ + +++ + EP + PI W A ESL
Sbjct: 132 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS-PIFWYAPESL 190
Query: 173 VSNIYTNKSDVWSFGVVLWEIVTL---GANPYPH----------IP-LCRIVHYLSTGYR 218
NI++ +SDVWSFGVVL+E+ T +P +P LCR++ L G R
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQR 250
Query: 219 MERPASC 225
+ P +C
Sbjct: 251 LPAPPAC 257
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 109/203 (53%), Gaps = 33/203 (16%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V L P +G VAVK L+ + + D F +EI ++K +
Sbjct: 31 LGKGNFGSVE--LCRYDPLGDNTGAL---VAVKQLQHSGPDQQRD-FQREIQILKAL-HS 83
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D IV + G Y + LRLV+EY G L+ +L+ EYL
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 143
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ + VHRDLA RNIL+ S VKI+DFGL++ + +++ + EP + PI W A ESL
Sbjct: 144 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS-PIFWYAPESL 202
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT 195
NI++ +SDVWSFGVVL+E+ T
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 109/203 (53%), Gaps = 33/203 (16%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V L P +G VAVK L+ + + D F +EI ++K +
Sbjct: 18 LGKGNFGSVE--LCRYDPLGDNTGAL---VAVKQLQHSGPDQQRD-FQREIQILKAL-HS 70
Query: 78 DHIVSFIGCCY---KDELRLVVEYCALGDLQSYLRE---------------------EYL 113
D IV + G Y + LRLV+EY G L+ +L+ EYL
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 130
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI-YEQNVFQNGEPSEKLPIRWLALESL 172
+ + VHRDLA RNIL+ S VKI+DFGL++ + +++ + EP + PI W A ESL
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS-PIFWYAPESL 189
Query: 173 VSNIYTNKSDVWSFGVVLWEIVT 195
NI++ +SDVWSFGVVL+E+ T
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 44/249 (17%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V L P +G+ +VAVK LK + KEI +++++ H
Sbjct: 29 LGEGHFGKV--ELCRYDPEGDNTGE---QVAVKSLKPESGGNHIADLKKEIEILRNL-YH 82
Query: 78 DHIVSFIGCCYKDE---LRLVVEYCALGDLQSYLRE---------------------EYL 113
++IV + G C +D ++L++E+ G L+ YL + +YL
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV 173
+ + VHRDLA RN+L+ S H VKI DFGL++ I + P+ W A E L+
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 174 SNIYTNKSDVWSFGVVLWEIVTL---GANP-----------YPHIPLCRIVHYLSTGYRM 219
+ + SDVWSFGV L E++T ++P + + + R+V+ L G R+
Sbjct: 203 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL 262
Query: 220 ERPASCNEQ 228
P +C ++
Sbjct: 263 PCPPNCPDE 271
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 44/249 (17%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG V L P +G+ +VAVK LK + KEI +++++ H
Sbjct: 17 LGEGHFGKV--ELCRYDPEGDNTGE---QVAVKSLKPESGGNHIADLKKEIEILRNL-YH 70
Query: 78 DHIVSFIGCCYKDE---LRLVVEYCALGDLQSYLRE---------------------EYL 113
++IV + G C +D ++L++E+ G L+ YL + +YL
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV 173
+ + VHRDLA RN+L+ S H VKI DFGL++ I + P+ W A E L+
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 174 SNIYTNKSDVWSFGVVLWEIVTL---GANP-----------YPHIPLCRIVHYLSTGYRM 219
+ + SDVWSFGV L E++T ++P + + + R+V+ L G R+
Sbjct: 191 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL 250
Query: 220 ERPASCNEQ 228
P +C ++
Sbjct: 251 PCPPNCPDE 259
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 22 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 69
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE---------------- 110
E+ +++ +H +I+ F+G K +L +V ++C L +L
Sbjct: 70 EVGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L + VKI DFGL+ E++ + E+L
Sbjct: 129 TARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT---EKSRWSGSHQFEQLSGS 185
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + SN Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 228
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 45/228 (19%)
Query: 7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK 66
+ P LI GEVLG+G FG +K + + EV V D +T FLK
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIK----------VTHRETGEVMVMKELIRFDEETQRTFLK 56
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------- 110
E+ +M+ + +H +++ FIG YKD+ L + EY G L+ ++
Sbjct: 57 EVKVMRCL-EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAK 115
Query: 111 ------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
YL + ++HRDL + N L+ V ++DFGL+ + ++ G S K P
Sbjct: 116 DIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 165 R-----------WLALESLVSNIYTNKSDVWSFGVVLWEIV-TLGANP 200
R W+A E + Y K DV+SFG+VL EI+ + A+P
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADP 223
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 122/247 (49%), Gaps = 48/247 (19%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEINL 70
L + E +G G FG V + + +VAVK+L + + A+ ++FL+E+ +
Sbjct: 39 LNIKEKIGAGSFGTVHR-----------AEWHGSDVAVKILMEQDFHAERVNEFLREVAI 87
Query: 71 MKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDL-----QSYLREE------------- 111
MK + +H +IV F+G + L +V EY + G L +S RE+
Sbjct: 88 MKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 112 -----YLSNNK--VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
YL N +VHRDL + N+L+ + VK+ DFGLS + + F + + P
Sbjct: 147 AKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXAAGTP- 203
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY---RMER 221
W+A E L KSDV+SFGV+LWE+ TL P+ ++ ++V + G+ R+E
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVV--AAVGFKCKRLEI 260
Query: 222 PASCNEQ 228
P + N Q
Sbjct: 261 PRNLNPQ 267
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 22 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 69
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE---------------- 110
E+ +++ +H +I+ F+G +L +V ++C L +L
Sbjct: 70 EVGVLRKT-RHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L + VKI DFGL+ E++ + E+L
Sbjct: 129 TARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT---EKSRWSGSHQFEQLSGS 185
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + SN Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 228
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 123/247 (49%), Gaps = 48/247 (19%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEINL 70
L + E +G G FG V + + +VAVK+L + + A+ ++FL+E+ +
Sbjct: 39 LNIKEKIGAGSFGTVHR-----------AEWHGSDVAVKILMEQDFHAERVNEFLREVAI 87
Query: 71 MKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDL-----QSYLREE------------- 111
MK + +H +IV F+G + L +V EY + G L +S RE+
Sbjct: 88 MKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 112 -----YLSNNK--VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
YL N +VHR+L + N+L+ + VK+ DFGLS + + F + + + P
Sbjct: 147 AKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLSSKSAAGTP- 203
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY---RMER 221
W+A E L KSDV+SFGV+LWE+ TL P+ ++ ++V + G+ R+E
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVV--AAVGFKCKRLEI 260
Query: 222 PASCNEQ 228
P + N Q
Sbjct: 261 PRNLNPQ 267
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 10 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 57
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE---------------- 110
E+ +++ +H +I+ F+G K +L +V ++C L +L
Sbjct: 58 EVGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 116
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L + VKI DFGL+ ++ + E+L
Sbjct: 117 TARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT---VKSRWSGSHQFEQLSGS 173
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + SN Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 216
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 34 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 81
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR----------------- 109
E+ +++ +H +I+ F+G K +L +V ++C L +L
Sbjct: 82 EVGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 110 ----EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L VKI DFGL+ E++ + E+L
Sbjct: 141 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---EKSRWSGSHQFEQLSGS 197
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + N Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 240
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 6 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 53
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR----------------- 109
E+ +++ +H +I+ F+G K +L +V ++C L +L
Sbjct: 54 EVGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 110 ----EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L VKI DFGL+ E++ + E+L
Sbjct: 113 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---EKSRWSGSHQFEQLSGS 169
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + N Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 26 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 73
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR----------------- 109
E+ +++ +H +I+ F+G K +L +V ++C L +L
Sbjct: 74 EVGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 132
Query: 110 ----EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L VKI DFGL+ E++ + E+L
Sbjct: 133 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---EKSRWSGSHQFEQLSGS 189
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + N Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 232
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 11 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 58
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR----------------- 109
E+ +++ +H +I+ F+G K +L +V ++C L +L
Sbjct: 59 EVGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 110 ----EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L VKI DFGL+ ++ + E+L
Sbjct: 118 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---VKSRWSGSHQFEQLSGS 174
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + N Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 11 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 58
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR----------------- 109
E+ +++ +H +I+ F+G K +L +V ++C L +L
Sbjct: 59 EVGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 110 ----EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L VKI DFGL+ ++ + E+L
Sbjct: 118 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---VKSRWSGSHQFEQLSGS 174
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + N Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 217
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 8 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 55
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR----------------- 109
E+ +++ +H +I+ F+G K +L +V ++C L +L
Sbjct: 56 EVGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 114
Query: 110 ----EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L VKI DFGL+ ++ + E+L
Sbjct: 115 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---VKSRWSGSHQFEQLSGS 171
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + N Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 214
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 34 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 81
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR----------------- 109
E+ +++ +H +I+ F+G K +L +V ++C L +L
Sbjct: 82 EVGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 110 ----EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L VKI DFGL+ ++ + E+L
Sbjct: 141 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---VKSRWSGSHQFEQLSGS 197
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + N Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 240
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 6 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 53
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR----------------- 109
E+ +++ +H +I+ F+G K +L +V ++C L +L
Sbjct: 54 EVGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 110 ----EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L VKI DFGL+ ++ + E+L
Sbjct: 113 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---VKSRWSGSHQFEQLSGS 169
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + N Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 212
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 33 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 80
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR----------------- 109
E+ +++ +H +I+ F+G K +L +V ++C L +L
Sbjct: 81 EVGVLRKT-RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 110 ----EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L VKI DFGL+ ++ + E+L
Sbjct: 140 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---VKSRWSGSHQFEQLSGS 196
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + N Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 239
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 44/224 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLK 66
P ++ +G+ +G G FG V KG + +VAVKML A + F
Sbjct: 6 PDGQITVGQRIGSGSFGTVYKG------------KWHGDVAVKMLNVTAPTPQQLQAFKN 53
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR----------------- 109
E+ +++ +H +I+ F+G +L +V ++C L +L
Sbjct: 54 EVGVLRKT-RHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 110 ----EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
+YL ++HRDL + NI L VKI DFGL+ ++ + E+L
Sbjct: 113 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT---VKSRWSGSHQFEQLSGS 169
Query: 164 IRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
I W+A E + N Y+ +SDV++FG+VL+E++T G PY +I
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNI 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 40/218 (18%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKA-NADAKTYDKFLKEINL 70
++L +G G FG V KG + +VAVK+LK + + + F E+ +
Sbjct: 38 VMLSTRIGSGSFGTVYKG------------KWHGDVAVKILKVVDPTPEQFQAFRNEVAV 85
Query: 71 MKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR--------------------- 109
++ +H +I+ F+G KD L +V ++C L +L
Sbjct: 86 LRKT-RHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQG 144
Query: 110 EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+YL ++HRD+ + NI L VKI DFGL+ + Q E + W+A
Sbjct: 145 MDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTG-SVLWMAP 203
Query: 170 ESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
E + +N ++ +SDV+S+G+VL+E++T G PY HI
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMT-GELPYSHI 240
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 44/247 (17%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQ-AAMEVAVKMLKANADAKTYDKFLKEI 68
E LI E LGQG F + KG+ + G GQ EV +K+L A + F +
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREV---GDYGQLHETEVLLKVLDK-AHRNYSESFFEAA 63
Query: 69 NLMKDVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLRE----------------- 110
++M + H H+V G C+ DE LV E+ G L +YL++
Sbjct: 64 SMMSKLS-HKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQL 122
Query: 111 ----EYLSNNKVVHRDLATRNILL--------SSPHVVKISDFGLSEDIYEQNVFQNGEP 158
+L N ++H ++ +NILL +P +K+SD G+S + +++ Q
Sbjct: 123 AWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ---- 178
Query: 159 SEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY 217
E++P W+ E + + N +D WSFG LWEI + G P + R + + +
Sbjct: 179 -ERIP--WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH 235
Query: 218 RMERPAS 224
++ P +
Sbjct: 236 QLPAPKA 242
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 41/236 (17%)
Query: 3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+S G P ++ E +GQG G V + + A+GQ EVA++ + K +
Sbjct: 13 VSVGDPKKKYTRFEKIGQGASGTVYTAM------DVATGQ---EVAIRQMNLQQQPKK-E 62
Query: 63 KFLKEINLMKDVGKHDHIVSFIGC-CYKDELRLVVEYCALGDLQSYLRE----------- 110
+ EI +M++ K+ +IV+++ DEL +V+EY A G L + E
Sbjct: 63 LIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 121
Query: 111 --------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPS 159
E+L +N+V+HRD+ + NILL VK++DFG I + ++ G P
Sbjct: 122 CRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP- 180
Query: 160 EKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
W+A E + Y K D+WS G++ E++ G PY + R ++ ++T
Sbjct: 181 -----YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIAT 230
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 41/236 (17%)
Query: 3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+S G P ++ E +GQG G V + + A+GQ EVA++ + K +
Sbjct: 14 VSVGDPKKKYTRFEKIGQGASGTVYTAM------DVATGQ---EVAIRQMNLQQQPKK-E 63
Query: 63 KFLKEINLMKDVGKHDHIVSFIGC-CYKDELRLVVEYCALGDLQSYLRE----------- 110
+ EI +M++ K+ +IV+++ DEL +V+EY A G L + E
Sbjct: 64 LIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 122
Query: 111 --------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPS 159
E+L +N+V+HRD+ + NILL VK++DFG I + ++ G P
Sbjct: 123 CRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP- 181
Query: 160 EKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
W+A E + Y K D+WS G++ E++ G PY + R ++ ++T
Sbjct: 182 -----YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIAT 231
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 41/236 (17%)
Query: 3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+S G P ++ E +GQG G V + + A+GQ EVA++ + K +
Sbjct: 13 VSVGDPKKKYTRFEKIGQGASGTVYTAM------DVATGQ---EVAIRQMNLQQQPKK-E 62
Query: 63 KFLKEINLMKDVGKHDHIVSFIGC-CYKDELRLVVEYCALGDLQSYLRE----------- 110
+ EI +M++ K+ +IV+++ DEL +V+EY A G L + E
Sbjct: 63 LIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 121
Query: 111 --------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPS 159
E+L +N+V+HRD+ + NILL VK++DFG I + ++ G P
Sbjct: 122 CRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP- 180
Query: 160 EKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
W+A E + Y K D+WS G++ E++ G PY + R ++ ++T
Sbjct: 181 -----YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIAT 230
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 41/236 (17%)
Query: 3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+S G P ++ E +GQG G V + + A+GQ EVA++ + K +
Sbjct: 13 VSVGDPKKKYTRFEKIGQGASGTVYTAM------DVATGQ---EVAIRQMNLQQQPKK-E 62
Query: 63 KFLKEINLMKDVGKHDHIVSFIGC-CYKDELRLVVEYCALGDLQSYLRE----------- 110
+ EI +M++ K+ +IV+++ DEL +V+EY A G L + E
Sbjct: 63 LIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 121
Query: 111 --------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPS 159
E+L +N+V+HRD+ + NILL VK++DFG I + ++ G P
Sbjct: 122 CRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTP- 180
Query: 160 EKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
W+A E + Y K D+WS G++ E++ G PY + R ++ ++T
Sbjct: 181 -----YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIAT 230
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 44/247 (17%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQ-AAMEVAVKMLKANADAKTYDKFLKEI 68
E LI E LGQG F + KG+ + G GQ EV +K+L A + F +
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREV---GDYGQLHETEVLLKVLDK-AHRNYSESFFEAA 63
Query: 69 NLMKDVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLRE----------------- 110
++M + H H+V G C DE LV E+ G L +YL++
Sbjct: 64 SMMSKLS-HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQL 122
Query: 111 ----EYLSNNKVVHRDLATRNILL--------SSPHVVKISDFGLSEDIYEQNVFQNGEP 158
+L N ++H ++ +NILL +P +K+SD G+S + +++ Q
Sbjct: 123 AAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ---- 178
Query: 159 SEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY 217
E++P W+ E + + N +D WSFG LWEI + G P + R + + +
Sbjct: 179 -ERIP--WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH 235
Query: 218 RMERPAS 224
++ P +
Sbjct: 236 QLPAPKA 242
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 41/236 (17%)
Query: 3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD 62
+S G P ++ E +GQG G V + + A+GQ EVA++ + K +
Sbjct: 14 VSVGDPKKKYTRFEKIGQGASGTVYTAM------DVATGQ---EVAIRQMNLQQQPKK-E 63
Query: 63 KFLKEINLMKDVGKHDHIVSFIGC-CYKDELRLVVEYCALGDLQSYLRE----------- 110
+ EI +M++ K+ +IV+++ DEL +V+EY A G L + E
Sbjct: 64 LIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 122
Query: 111 --------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPS 159
E+L +N+V+HR++ + NILL VK++DFG I + ++ G P
Sbjct: 123 CRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP- 181
Query: 160 EKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
W+A E + Y K D+WS G++ E++ G PY + R ++ ++T
Sbjct: 182 -----YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIAT 231
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 55/252 (21%)
Query: 12 LILGEVLGQGEFGVVVKGL-LGDGPTEGASGQAAMEVAVKMLKANAD---AKTYDKFLKE 67
L L E++G G FG V + +GD EVAVK + + D ++T + +E
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWIGD------------EVAVKAARHDPDEDISQTIENVRQE 56
Query: 68 INLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLREE--------------- 111
L + KH +I++ G C K+ L LV+E+ G L L +
Sbjct: 57 AKLFAML-KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIA 115
Query: 112 ----YLSNNKVV---HRDLATRNILLS--------SPHVVKISDFGLSEDIYEQNVFQNG 156
YL + +V HRDL + NIL+ S ++KI+DFGL+ + + +
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-----RTT 170
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG 216
+ S W+A E + +++++ SDVWS+GV+LWE++T G P+ I + + ++
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGIDGLAVAYGVAMN 229
Query: 217 -YRMERPASCNE 227
+ P++C E
Sbjct: 230 KLALPIPSTCPE 241
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 52/232 (22%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
EV+G+G FGVV K + A +VA+K +++ ++ K + L++++ +
Sbjct: 15 EVVGRGAFGVVCK-----------AKWRAKDVAIKQIESESERKAFIVELRQLSRVN--- 60
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE------------------------- 110
H +IV G C + + LV+EY G L + L
Sbjct: 61 -HPNIVKLYGACL-NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 111 -EYLSNNKVVHRDLATRNILL-SSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
+ ++HRDL N+LL + V+KI DFG + DI G + W+A
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA------WMA 172
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI--PLCRIVHYLSTGYR 218
E + Y+ K DV+S+G++LWE++T P+ I P RI+ + G R
Sbjct: 173 PEVFEGSNYSEKCDVFSWGIILWEVITR-RKPFDEIGGPAFRIMWAVHNGTR 223
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 52/232 (22%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
EV+G+G FGVV K + A +VA+K +++ ++ K + L++++ +
Sbjct: 14 EVVGRGAFGVVCK-----------AKWRAKDVAIKQIESESERKAFIVELRQLSRVN--- 59
Query: 76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE------------------------- 110
H +IV G C + + LV+EY G L + L
Sbjct: 60 -HPNIVKLYGACL-NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 111 -EYLSNNKVVHRDLATRNILL-SSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
+ ++HRDL N+LL + V+KI DFG + DI G + W+A
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA------WMA 171
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI--PLCRIVHYLSTGYR 218
E + Y+ K DV+S+G++LWE++T P+ I P RI+ + G R
Sbjct: 172 PEVFEGSNYSEKCDVFSWGIILWEVITR-RKPFDEIGGPAFRIMWAVHNGTR 222
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E + E LG+G +G V K + + +GQ VA+K + +D + + +KE
Sbjct: 27 PEEVFDVLEKLGEGSYGSVYKAIHKE------TGQI---VAIKQVPVESDLQ---EIIKE 74
Query: 68 INLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGD--------------------LQS 106
I++M+ H+V + G +K+ +L +V+EYC G LQS
Sbjct: 75 ISIMQQCDS-PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQS 133
Query: 107 YLRE-EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKL 162
L+ EYL + +HRD+ NILL++ K++DFG++ + + +N G P
Sbjct: 134 TLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF--- 190
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST 215
W+A E + Y +D+WS G+ E+ G PY I R + + T
Sbjct: 191 ---WMAPEVIQEIGYNCVADIWSLGITAIEMAE-GKPPYADIHPMRAIFMIPT 239
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 57/225 (25%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L E++G G +G V KG +GQ A A+K++ D + ++ +EIN++K
Sbjct: 28 LVELVGNGTYGQVYKG------RHVKTGQLA---AIKVMDVTGDEE--EEIKQEINMLKK 76
Query: 74 VGKHDHIVSFIGCCYK-------DELRLVVEYCALGDLQ--------SYLREEY------ 112
H +I ++ G K D+L LV+E+C G + + L+EE+
Sbjct: 77 YSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICR 136
Query: 113 --------LSNNKVVHRDLATRNILLSSPHVVKISDFGLS----EDIYEQNVFQNGEPSE 160
L +KV+HRD+ +N+LL+ VK+ DFG+S + +N F G P
Sbjct: 137 EILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPY- 194
Query: 161 KLPIRWLALESLVSN-----IYTNKSDVWSFGVVLWEIVTLGANP 200
W+A E + + Y KSD+WS G+ E+ GA P
Sbjct: 195 -----WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE-GAPP 233
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 45/210 (21%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD---KFLKEINLM 71
G +G+G FGVV KG + + VAVK L A D T + +F +EI +M
Sbjct: 36 GNKMGEGGFGVVYKGYVNN-----------TTVAVKKLAAMVDITTEELKQQFDQEIKVM 84
Query: 72 KDVGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLR--------------------- 109
+H+++V +G D+L LV Y G L L
Sbjct: 85 AKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 143
Query: 110 --EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE--DIYEQNVFQNGEPSEKLPIR 165
+L N +HRD+ + NILL KISDFGL+ + + Q V +
Sbjct: 144 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVG---TTA 200
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVT 195
++A E+L I T KSD++SFGVVL EI+T
Sbjct: 201 YMAPEALRGEI-TPKSDIYSFGVVLLEIIT 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 94/210 (44%), Gaps = 45/210 (21%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD---KFLKEINLM 71
G +G+G FGVV KG + + VAVK L A D T + +F +EI +M
Sbjct: 36 GNKMGEGGFGVVYKGYVNN-----------TTVAVKKLAAMVDITTEELKQQFDQEIKVM 84
Query: 72 KDVGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLR--------------------- 109
+H+++V +G D+L LV Y G L L
Sbjct: 85 AKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 143
Query: 110 --EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE--DIYEQNVFQNGEPSEKLPIR 165
+L N +HRD+ + NILL KISDFGL+ + + Q V
Sbjct: 144 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVG---TTA 200
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVT 195
++A E+L I T KSD++SFGVVL EI+T
Sbjct: 201 YMAPEALRGEI-TPKSDIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 94/210 (44%), Gaps = 45/210 (21%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD---KFLKEINLM 71
G +G+G FGVV KG + + VAVK L A D T + +F +EI +M
Sbjct: 30 GNKMGEGGFGVVYKGYVNN-----------TTVAVKKLAAMVDITTEELKQQFDQEIKVM 78
Query: 72 KDVGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLR--------------------- 109
+H+++V +G D+L LV Y G L L
Sbjct: 79 AKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 137
Query: 110 --EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE--DIYEQNVFQNGEPSEKLPIR 165
+L N +HRD+ + NILL KISDFGL+ + + Q V
Sbjct: 138 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVG---TTA 194
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVT 195
++A E+L I T KSD++SFGVVL EI+T
Sbjct: 195 YMAPEALRGEI-TPKSDIYSFGVVLLEIIT 223
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 42/208 (20%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
E LG G + V KGL + + VA+K +K +++ T ++EI+LMK++
Sbjct: 11 EKLGNGTYATVYKGL---------NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL- 60
Query: 76 KHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREEYLSN------------------- 115
KH++IV + +++L LV E+ DL+ Y+ + N
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 116 -------NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
NK++HRDL +N+L++ +K+ DFGL+ + N SE + + + A
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF---GIPVNTFSSEVVTLWYRA 176
Query: 169 LESLV-SNIYTNKSDVWSFGVVLWEIVT 195
+ L+ S Y+ D+WS G +L E++T
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMIT 204
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 38/203 (18%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGK 76
++G G FG V KG+L DG +VA+K + + + L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGA----------KVALKRRTPESSQGIEEFETEIETL--SFCR 93
Query: 77 HDHIVSFIGCC-YKDELRLVVEYCALGDLQSYL--------------REE---------- 111
H H+VS IG C ++E+ L+ +Y G+L+ +L R E
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
YL ++HRD+ + NILL V KI+DFG+S+ E + + K + ++ E
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ-THLXXVVKGTLGYIDPEY 212
Query: 172 LVSNIYTNKSDVWSFGVVLWEIV 194
+ T KSDV+SFGVVL+E++
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 40/210 (19%)
Query: 9 PERLILG-EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
PE L E +G+G FG V KG+ D T+ VA+K++ + +E
Sbjct: 20 PEELFTKLEKIGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQE 70
Query: 68 INLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALG--------------DLQSYLRE-- 110
I ++ ++ + G KD +L +++EY G + + LRE
Sbjct: 71 ITVLSQCDS-PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL 129
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKLPI 164
+YL + K +HRD+ N+LLS VK++DFG++ + + + +N G P
Sbjct: 130 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF----- 184
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
W+A E + + Y +K+D+WS G+ E+
Sbjct: 185 -WMAPEVIKQSAYDSKADIWSLGITAIELA 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E E +G+G FG V KG+ D T+ VA+K++ + +E
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQE 55
Query: 68 INLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALG--------------DLQSYLRE-- 110
I ++ ++ + G KD +L +++EY G + + LRE
Sbjct: 56 ITVLSQCDS-PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL 114
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKLPI 164
+YL + K +HRD+ N+LLS VK++DFG++ + + + +N G P
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF----- 169
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
W+A E + + Y +K+D+WS G+ E+
Sbjct: 170 -WMAPEVIKQSAYDSKADIWSLGITAIELA 198
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 97/235 (41%), Gaps = 55/235 (23%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L EV+G G VV +VA+K + + D+ LKEI M
Sbjct: 14 LQEVIGSGATAVV---------QAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 64
Query: 74 VGKHDHIVSF-IGCCYKDELRLVVEYCALGD-----------------------LQSYLR 109
H +IVS+ KDEL LV++ + G + + LR
Sbjct: 65 C-HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 110 E-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE------DIYEQNVFQN--G 156
E EYL N +HRD+ NILL V+I+DFG+S DI V + G
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 157 EPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIV 210
P W+A E + Y K+D+WSFG+ E+ T GA PY P +++
Sbjct: 184 TPC------WMAPEVMEQVRGYDFKADIWSFGITAIELAT-GAAPYHKYPPMKVL 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E E +G+G FG V KG+ D T+ VA+K++ + +E
Sbjct: 25 PEELFTKLEKIGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQE 75
Query: 68 INLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALG--------------DLQSYLRE-- 110
I ++ ++ + G KD +L +++EY G + + LRE
Sbjct: 76 ITVLSQCDS-PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL 134
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKLPI 164
+YL + K +HRD+ N+LLS VK++DFG++ + + + +N G P
Sbjct: 135 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF----- 189
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
W+A E + + Y +K+D+WS G+ E+
Sbjct: 190 -WMAPEVIKQSAYDSKADIWSLGITAIELA 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E E +G+G FG V KG+ D T+ VA+K++ + +E
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQE 55
Query: 68 INLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALG--------------DLQSYLRE-- 110
I ++ ++ + G KD +L +++EY G + + LRE
Sbjct: 56 ITVLSQCDS-PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL 114
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKLPI 164
+YL + K +HRD+ N+LLS VK++DFG++ + + + +N G P
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF----- 169
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
W+A E + + Y +K+D+WS G+ E+
Sbjct: 170 -WMAPEVIKQSAYDSKADIWSLGITAIELA 198
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 38/203 (18%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGK 76
++G G FG V KG+L DG +VA+K + + + L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGA----------KVALKRRTPESSQGIEEFETEIETL--SFCR 93
Query: 77 HDHIVSFIGCC-YKDELRLVVEYCALGDLQSYL--------------REE---------- 111
H H+VS IG C ++E+ L+ +Y G+L+ +L R E
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
YL ++HRD+ + NILL V KI+DFG+S+ E + K + ++ E
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQ-THLXXVVKGTLGYIDPEY 212
Query: 172 LVSNIYTNKSDVWSFGVVLWEIV 194
+ T KSDV+SFGVVL+E++
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 97/235 (41%), Gaps = 55/235 (23%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L EV+G G VV +VA+K + + D+ LKEI M
Sbjct: 19 LQEVIGSGATAVV---------QAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 69
Query: 74 VGKHDHIVSF-IGCCYKDELRLVVEYCALGD-----------------------LQSYLR 109
H +IVS+ KDEL LV++ + G + + LR
Sbjct: 70 C-HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 110 E-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE------DIYEQNVFQN--G 156
E EYL N +HRD+ NILL V+I+DFG+S DI V + G
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 157 EPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIV 210
P W+A E + Y K+D+WSFG+ E+ T GA PY P +++
Sbjct: 189 TPC------WMAPEVMEQVRGYDFKADIWSFGITAIELAT-GAAPYHKYPPMKVL 236
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 51/229 (22%)
Query: 1 MALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKT 60
+ +S G P E L +G+G G+V TE +G+ +VAVK + +
Sbjct: 36 LVVSPGDPREYLANFIKIGEGSTGIVCIA------TEKHTGK---QVAVKKMDLRKQQRR 86
Query: 61 YDKFLKEINLMKDVGKHDHIVS-FIGCCYKDELRLVVEYC---ALGDLQSYLR--EE--- 111
+ E+ +M+D HD++V + DEL +V+E+ AL D+ ++ R EE
Sbjct: 87 -ELLFNEVVIMRDY-HHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA 144
Query: 112 -----------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSE 160
YL N V+HRD+ + +ILL+S +K+SDFG + S+
Sbjct: 145 TVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV-----------SK 193
Query: 161 KLPIR--------WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++P R W+A E + Y + D+WS G+++ E++ G PY
Sbjct: 194 EVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID-GEPPY 241
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 52/223 (23%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ E LG G FG V++ + D +VA+K + K +++ EI +MK
Sbjct: 18 MKERLGTGGFGYVLRWIHQD---------TGEQVAIKQCRQELSPKNRERWCLEIQIMKK 68
Query: 74 VGKHDHIVS-------FIGCCYKDELRLVVEYCALGDLQSYLRE---------------- 110
+ H ++VS D L +EYC GDL+ YL +
Sbjct: 69 LN-HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 127
Query: 111 -------EYLSNNKVVHRDLATRNILLS-SPH--VVKISDFGLSEDIYEQNVFQNGEPSE 160
YL N+++HRDL NI+L P + KI D G ++++ GE
Sbjct: 128 SDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL------DQGELCT 181
Query: 161 KL--PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +++LA E L YT D WSFG + +E +T G P+
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT-GFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 52/223 (23%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
+ E LG G FG V++ + D +VA+K + K +++ EI +MK
Sbjct: 19 MKERLGTGGFGYVLRWIHQD---------TGEQVAIKQCRQELSPKNRERWCLEIQIMKK 69
Query: 74 VGKHDHIVS-------FIGCCYKDELRLVVEYCALGDLQSYLRE---------------- 110
+ H ++VS D L +EYC GDL+ YL +
Sbjct: 70 LN-HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 128
Query: 111 -------EYLSNNKVVHRDLATRNILLS-SPH--VVKISDFGLSEDIYEQNVFQNGEPSE 160
YL N+++HRDL NI+L P + KI D G ++++ GE
Sbjct: 129 SDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL------DQGELCT 182
Query: 161 KL--PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +++LA E L YT D WSFG + +E +T G P+
Sbjct: 183 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT-GFRPF 224
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 39/210 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E E +G+G FG V KG+ D T+ VA+K++ + +E
Sbjct: 21 PEELFTKLERIGKGSFGEVFKGI--DNRTQQV-------VAIKIIDLEEAEDEIEDIQQE 71
Query: 68 INLMKDVGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLRE---------------- 110
I ++ ++ + G K +L +++EY G LR
Sbjct: 72 ITVLSQC-DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL 130
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKLPI 164
+YL + K +HRD+ N+LLS VK++DFG++ + + + +N G P
Sbjct: 131 KGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF----- 185
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
W+A E + + Y +K+D+WS G+ E+
Sbjct: 186 -WMAPEVIQQSAYDSKADIWSLGITAIELA 214
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 91/209 (43%), Gaps = 43/209 (20%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD---KFLKEINLM 71
G G+G FGVV KG + + VAVK L A D T + +F +EI +
Sbjct: 27 GNKXGEGGFGVVYKGYVNN-----------TTVAVKKLAAMVDITTEELKQQFDQEIKVX 75
Query: 72 KDVGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLR--------------------- 109
+H+++V +G D+L LV Y G L L
Sbjct: 76 AKC-QHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAA 134
Query: 110 --EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-PIRW 166
+L N +HRD+ + NILL KISDFGL+ + Q S + +
Sbjct: 135 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR--ASEKFAQXVXXSRIVGTTAY 192
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVT 195
A E+L I T KSD++SFGVVL EI+T
Sbjct: 193 XAPEALRGEI-TPKSDIYSFGVVLLEIIT 220
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 50/215 (23%)
Query: 13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
I+GE LG G FG V K + + ++ A K++ ++ + D ++ EI+++
Sbjct: 41 IIGE-LGDGAFGKVYKA---------QNKETSVLAAAKVIDTKSEEELED-YMVEIDILA 89
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLRE--------------------- 110
H +IV + Y ++ L +++E+CA G + + + E
Sbjct: 90 SCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS----EDIYEQNVFQNGEPSEKLPIRW 166
YL +NK++HRDL NIL + +K++DFG+S I ++ F G P W
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTP------YW 201
Query: 167 LALESLVSNI-----YTNKSDVWSFGVVLWEIVTL 196
+A E ++ Y K+DVWS G+ L E+ +
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 50/215 (23%)
Query: 13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
I+GE LG G FG V K + + ++ A K++ ++ + D ++ EI+++
Sbjct: 41 IIGE-LGDGAFGKVYKA---------QNKETSVLAAAKVIDTKSEEELED-YMVEIDILA 89
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLRE--------------------- 110
H +IV + Y ++ L +++E+CA G + + + E
Sbjct: 90 SCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS----EDIYEQNVFQNGEPSEKLPIRW 166
YL +NK++HRDL NIL + +K++DFG+S I ++ F G P W
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTP------YW 201
Query: 167 LALESLVSNI-----YTNKSDVWSFGVVLWEIVTL 196
+A E ++ Y K+DVWS G+ L E+ +
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 50/215 (23%)
Query: 13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
I+GE LG G FG V K + + ++ A K++ ++ + D ++ EI+++
Sbjct: 41 IIGE-LGDGAFGKVYKA---------QNKETSVLAAAKVIDTKSEEELED-YMVEIDILA 89
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLRE--------------------- 110
H +IV + Y ++ L +++E+CA G + + + E
Sbjct: 90 SCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS----EDIYEQNVFQNGEPSEKLPIRW 166
YL +NK++HRDL NIL + +K++DFG+S I ++ F G P W
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTP------YW 201
Query: 167 LALESLVSNI-----YTNKSDVWSFGVVLWEIVTL 196
+A E ++ Y K+DVWS G+ L E+ +
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 54/220 (24%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVK-MLKANADAKT-----YDKFLKEINLM 71
+G+G FG+V KG L + VA+K ++ +++ +T + +F +E+ +M
Sbjct: 27 IGKGGFGLVHKGRLVKDKSV---------VAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 72 KDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------- 110
++ H +IV G + + R+V+E+ GDL L +
Sbjct: 78 SNLN-HPNIVKLYGLMH-NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 111 EYLSNNK--VVHRDLATRNILLSS-----PHVVKISDFGLSEDIYEQNVFQNGEPSEKLP 163
EY+ N +VHRDL + NI L S P K++DFGLS+ G
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGN------ 189
Query: 164 IRWLALESLVSN--IYTNKSDVWSFGVVLWEIVTLGANPY 201
+W+A E++ + YT K+D +SF ++L+ I+T G P+
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILT-GEGPF 228
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 48/215 (22%)
Query: 18 LGQGEFGVVVKG-LLGDGPTEGASGQAAMEVAVKMLKAN--ADAKTYDKFLKEINLMKDV 74
+G+G+F V + L DG + VA+K ++ DAK +KEI+L+K +
Sbjct: 40 IGRGQFSEVYRAACLLDG----------VPVALKKVQIFDLMDAKARADCIKEIDLLKQL 89
Query: 75 GKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------------------- 110
H +++ + +D EL +V+E GDL ++
Sbjct: 90 N-HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKLPIRW 166
E++ + +V+HRD+ N+ +++ VVK+ D GL + + G P +
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY------Y 202
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E + N Y KSD+WS G +L+E+ L + Y
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 237
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 45/226 (19%)
Query: 1 MALSCGYPPERLILGEV--LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA 58
M + G P RL+L +G+G G+V E SG+ +VAVKM+
Sbjct: 36 MVVDQGDP--RLLLDSYVKIGEGSTGIVCLA------REKHSGR---QVAVKMMDLRKQQ 84
Query: 59 KTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVVEYC---ALGDLQSYLR--EE-- 111
+ + E+ +M+D + + + +EL +++E+ AL D+ S +R EE
Sbjct: 85 RR-ELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQI 143
Query: 112 ------------YLSNNKVVHRDLATRNILLSSPHVVKISDFG----LSEDIYEQNVFQN 155
YL V+HRD+ + +ILL+ VK+SDFG +S+D+ ++
Sbjct: 144 ATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXL-V 202
Query: 156 GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
G P W+A E + ++Y + D+WS G+++ E+V G PY
Sbjct: 203 GTPY------WMAPEVISRSLYATEVDIWSLGIMVIEMVD-GEPPY 241
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 45/209 (21%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGK 76
+LG+G FG V KG L DG VAVK LK +F E+ ++ +
Sbjct: 45 ILGRGGFGKVYKGRLADGTL----------VAVKRLKEERXQGGELQFQTEVEMIS-MAV 93
Query: 77 HDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLREE------------------------ 111
H +++ G C RL+V Y A G + S LRE
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 112 YLSNN---KVVHRDLATRNILLSSPHVVKISDFGLSE--DIYEQNVFQNGEPSEKLPIRW 166
YL ++ K++HRD+ NILL + DFGL++ D + +V + + I
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX----AVRGTIGH 209
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVT 195
+A E L + + K+DV+ +GV+L E++T
Sbjct: 210 IAPEYLSTGKSSEKTDVFGYGVMLLELIT 238
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 39/200 (19%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+ LG+G FG K L T G + A+++ K + A +D + + +EI+ ++ +
Sbjct: 14 KTLGEGSFG---KVKLAYHTTTGQ--KVALKIINKKVLAKSDMQG--RIEREISYLR-LL 65
Query: 76 KHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLRE--------------------EYLS 114
+H HI+ KDE+ +V+EY +L Y+ + EY
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 124
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRWLALESL 172
+K+VHRDL N+LL VKI+DFGLS + + N + G P+ P E +
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP------EVI 178
Query: 173 VSNIYTN-KSDVWSFGVVLW 191
+Y + DVWS GV+L+
Sbjct: 179 SGKLYAGPEVDVWSCGVILY 198
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 39/210 (18%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E + +G+G FG V KG+ D T+ VA+K++ + +E
Sbjct: 17 PEELFTKLDRIGKGSFGEVYKGI--DNHTKEV-------VAIKIIDLEEAEDEIEDIQQE 67
Query: 68 INLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGD--------------LQSYLRE-- 110
I ++ +I + G K +L +++EY G + + LRE
Sbjct: 68 ITVLSQCDS-PYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL 126
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKLPI 164
+YL + + +HRD+ N+LLS VK++DFG++ + + + +N G P
Sbjct: 127 KGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF----- 181
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
W+A E + + Y K+D+WS G+ E+
Sbjct: 182 -WMAPEVIKQSAYDFKADIWSLGITAIELA 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 39/200 (19%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+ LG+G FG K L T G + A+++ K + A +D + + +EI+ ++ +
Sbjct: 10 KTLGEGSFG---KVKLAYHTTTGQ--KVALKIINKKVLAKSDMQG--RIEREISYLR-LL 61
Query: 76 KHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLRE--------------------EYLS 114
+H HI+ KDE+ +V+EY +L Y+ + EY
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRWLALESL 172
+K+VHRDL N+LL VKI+DFGLS + + N + G P+ P E +
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP------EVI 174
Query: 173 VSNIYTN-KSDVWSFGVVLW 191
+Y + DVWS GV+L+
Sbjct: 175 SGKLYAGPEVDVWSCGVILY 194
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 39/200 (19%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+ LG+G FG K L T G + A+++ K + A +D + + +EI+ ++ +
Sbjct: 19 KTLGEGSFG---KVKLAYHTTTGQ--KVALKIINKKVLAKSDMQG--RIEREISYLR-LL 70
Query: 76 KHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLRE--------------------EYLS 114
+H HI+ KDE+ +V+EY +L Y+ + EY
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRWLALESL 172
+K+VHRDL N+LL VKI+DFGLS + + N + G P+ P E +
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP------EVI 183
Query: 173 VSNIYTN-KSDVWSFGVVLW 191
+Y + DVWS GV+L+
Sbjct: 184 SGKLYAGPEVDVWSCGVILY 203
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 45/209 (21%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGK 76
+LG+G FG V KG L DG VAVK LK +F E+ ++ +
Sbjct: 37 ILGRGGFGKVYKGRLADGXL----------VAVKRLKEERTQGGELQFQTEVEMIS-MAV 85
Query: 77 HDHIVSFIGCCYKDELRLVV-EYCALGDLQSYLREE------------------------ 111
H +++ G C RL+V Y A G + S LRE
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 112 YLSNN---KVVHRDLATRNILLSSPHVVKISDFGLSE--DIYEQNVFQNGEPSEKLPIRW 166
YL ++ K++HRD+ NILL + DFGL++ D + +V + + I
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX----AVRGXIGH 201
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVT 195
+A E L + + K+DV+ +GV+L E++T
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELIT 230
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 39/200 (19%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+ LG+G FG K L T G + A+++ K + A +D + + +EI+ ++ +
Sbjct: 20 KTLGEGSFG---KVKLAYHTTTGQ--KVALKIINKKVLAKSDMQG--RIEREISYLR-LL 71
Query: 76 KHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLRE--------------------EYLS 114
+H HI+ KDE+ +V+EY +L Y+ + EY
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRWLALESL 172
+K+VHRDL N+LL VKI+DFGLS + + N + G P+ P E +
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP------EVI 184
Query: 173 VSNIYTN-KSDVWSFGVVLW 191
+Y + DVWS GV+L+
Sbjct: 185 SGKLYAGPEVDVWSCGVILY 204
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 54/220 (24%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVK-MLKANADAKT-----YDKFLKEINLM 71
+G+G FG+V KG L + VA+K ++ +++ +T + +F +E+ +M
Sbjct: 27 IGKGGFGLVHKGRLVKDKSV---------VAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 72 KDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------- 110
++ H +IV G + + R+V+E+ GDL L +
Sbjct: 78 SNLN-HPNIVKLYGLMH-NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 111 EYLSNNK--VVHRDLATRNILLSS-----PHVVKISDFGLSEDIYEQNVFQNGEPSEKLP 163
EY+ N +VHRDL + NI L S P K++DFG S+ G
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGN------ 189
Query: 164 IRWLALESLVSN--IYTNKSDVWSFGVVLWEIVTLGANPY 201
+W+A E++ + YT K+D +SF ++L+ I+T G P+
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILT-GEGPF 228
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 46/229 (20%)
Query: 1 MALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML--KANADA 58
+A G E +G +LG+G F V + S +EVA+KM+ KA A
Sbjct: 2 LATCIGEKIEDFKVGNLLGKGSFAGVYRA---------ESIHTGLEVAIKMIDKKAMYKA 52
Query: 59 KTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQSYLREE----- 111
+ E+ + + KH I+ ++D + LV+E C G++ YL+
Sbjct: 53 GMVQRVQNEVKIHCQL-KHPSILELYNY-FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFS 110
Query: 112 ----------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI---YEQNV 152
YL ++ ++HRDL N+LL+ +KI+DFGL+ + +E++
Sbjct: 111 ENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY 170
Query: 153 FQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
G P+ +++ E + + +SDVWS G + + ++ +G P+
Sbjct: 171 TLCGTPN------YISPEIATRSAHGLESDVWSLGCMFYTLL-IGRPPF 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 46 EVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGD 103
EVAVK++ K ++ + K +E+ +MK V H +IV ++ L LV+EY + G+
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 104 LQSYL---------------RE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+ YL R+ +Y +VHRDL N+LL + +KI+DFG
Sbjct: 100 VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF 159
Query: 144 SEDIYEQNVFQN--GEPSEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANP 200
S + N G P + A E Y + DVWS GV+L+ +V+ G+ P
Sbjct: 160 SNEFTFGNKLDTFCGSPP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLP 212
Query: 201 Y 201
+
Sbjct: 213 F 213
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 46 EVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGD 103
EVAVK++ K ++ + K +E+ +MK V H +IV ++ L LV+EY + G+
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 104 LQSYL---------------RE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+ YL R+ +Y +VHRDL N+LL + +KI+DFG
Sbjct: 100 VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF 159
Query: 144 SEDIYEQNVFQN--GEPSEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANP 200
S + N G P + A E Y + DVWS GV+L+ +V+ G+ P
Sbjct: 160 SNEFTFGNKLDTFCGSPP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLP 212
Query: 201 Y 201
+
Sbjct: 213 F 213
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 54/220 (24%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVK-MLKANADAKT-----YDKFLKEINLM 71
+G+G FG+V KG L + VA+K ++ +++ +T + +F +E+ +M
Sbjct: 27 IGKGGFGLVHKGRLVKDKSV---------VAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 72 KDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------- 110
++ H +IV G + + R+V+E+ GDL L +
Sbjct: 78 SNLN-HPNIVKLYGLMH-NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 111 EYLSNNK--VVHRDLATRNILLSS-----PHVVKISDFGLSEDIYEQNVFQNGEPSEKLP 163
EY+ N +VHRDL + NI L S P K++DF LS+ G
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGN------ 189
Query: 164 IRWLALESLVSN--IYTNKSDVWSFGVVLWEIVTLGANPY 201
+W+A E++ + YT K+D +SF ++L+ I+T G P+
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILT-GEGPF 228
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 33/181 (18%)
Query: 46 EVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGD 103
EVAVK++ K ++ + K +E+ +MK V H +IV ++ L LV+EY + G+
Sbjct: 34 EVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKLFEVIETEKTLYLVMEYASGGE 92
Query: 104 LQSYL---------------RE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+ YL R+ +Y +VHRDL N+LL + +KI+DFG
Sbjct: 93 VFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF 152
Query: 144 SEDIYEQNVFQN--GEPSEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANP 200
S + N G P P E Y + DVWS GV+L+ +V+ G+ P
Sbjct: 153 SNEFTFGNKLDTFCGSPPYAAP------ELFQGKKYDGPEVDVWSLGVILYTLVS-GSLP 205
Query: 201 Y 201
+
Sbjct: 206 F 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 44/215 (20%)
Query: 13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKT--YDKFLKEINL 70
I+ E LG+G FG V + +VA+K + K+ + + +EI+
Sbjct: 12 IIRETLGEGSFGKV---------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISY 62
Query: 71 MKDVGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLRE------------------- 110
+K + +H HI+ ++ +V+EY G+L Y+ E
Sbjct: 63 LK-LLRHPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIICA 120
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRWL 167
EY +K+VHRDL N+LL VKI+DFGLS + + N + G P+ +
Sbjct: 121 IEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN------YA 174
Query: 168 ALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANPY 201
A E + +Y + DVWS G+VL+ ++ +G P+
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLY-VMLVGRLPF 208
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 41/209 (19%)
Query: 16 EVLGQ-GEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
E++G+ G+FG V K + + ++ A K++ ++ + D ++ EI+++
Sbjct: 15 EIIGELGDFGKVYKA---------QNKETSVLAAAKVIDTKSEEELED-YMVEIDILASC 64
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLRE---------------------EY 112
H +IV + Y ++ L +++E+CA G + + + E Y
Sbjct: 65 D-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 123
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
L +NK++HRDL NIL + +K++DFG+S + Q + P W+A E +
Sbjct: 124 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK-NTRTXIQRRDSFIGTPY-WMAPEVV 181
Query: 173 VSNI-----YTNKSDVWSFGVVLWEIVTL 196
+ Y K+DVWS G+ L E+ +
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMAEI 210
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVK-MLKANADAKTYDKFLKE 67
PE L VLG+G +G V + G G AM+V K M+ NA + K E
Sbjct: 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKI--FAMKVLKKAMIVRNAKDTAHTK--AE 71
Query: 68 INLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLREE--------------- 111
N++++V KH IV I +L L++EY + G+L L E
Sbjct: 72 RNILEEV-KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 112 -----YLSNNKVVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQNGEPSEKLPIR 165
+L +++RDL NI+L+ VK++DFGL E I++ V + I
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGT----IE 186
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E L+ + + D WS G ++++++T GA P+
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLT-GAPPF 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 44/213 (20%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L +LG+G +GVV T +G+ VA+K ++ + L+EI ++K
Sbjct: 15 LKSLLGEGAYGVVCSA------THKPTGEI---VAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 74 VGKHDHIVSFIGCCYKDELR-----LVVEYCALGDLQSYLREEYLSNN------------ 116
KH++I++ D +++ DL + + LS++
Sbjct: 66 F-KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 117 -------KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP-------SEKL 162
V+HRDL N+L++S +K+ DFGL+ I +++ N EP +E +
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGMTEXV 183
Query: 163 PIRWLALES--LVSNIYTNKSDVWSFGVVLWEI 193
RW L S Y+ DVWS G +L E+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 46 EVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGD 103
EVAVK++ K ++ + K +E+ +MK V H +IV ++ L LV+EY + G+
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 104 LQSYL---------------RE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+ YL R+ +Y +VHRDL N+LL + +KI+DFG
Sbjct: 100 VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF 159
Query: 144 SEDIYEQNVFQN--GEPSEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANP 200
S + N G P + A E Y + DVWS GV+L+ +V+ G+ P
Sbjct: 160 SNEFTFGNKLDAFCGAPP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLP 212
Query: 201 Y 201
+
Sbjct: 213 F 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 46 EVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGD 103
EVAV+++ K ++ + K +E+ +MK V H +IV ++ L LV+EY + G+
Sbjct: 41 EVAVRIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 104 LQSYL---------------RE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+ YL R+ +Y +VHRDL N+LL + +KI+DFG
Sbjct: 100 VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF 159
Query: 144 SEDIYEQNVFQN--GEPSEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANP 200
S + N G P + A E Y + DVWS GV+L+ +V+ G+ P
Sbjct: 160 SNEFTFGNKLDTFCGSPP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLP 212
Query: 201 Y 201
+
Sbjct: 213 F 213
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 46 EVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGD 103
EVAV+++ K ++ + K +E+ +MK V H +IV ++ L LV+EY + G+
Sbjct: 41 EVAVRIIDKTQLNSSSLQKLFREVRIMK-VLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 104 LQSYL---------------RE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+ YL R+ +Y +VHRDL N+LL + +KI+DFG
Sbjct: 100 VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF 159
Query: 144 SEDIYEQNVFQN--GEPSEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANP 200
S + N G P + A E Y + DVWS GV+L+ +V+ G+ P
Sbjct: 160 SNEFTFGNKLDEFCGSPP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLP 212
Query: 201 Y 201
+
Sbjct: 213 F 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 40/210 (19%)
Query: 13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
I+GE LG G FG V K + + A K+++ ++ + D ++ EI ++
Sbjct: 23 IVGE-LGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELED-YIVEIEILA 71
Query: 73 DVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE--------------------- 110
H +IV +G Y D +L +++E+C G + + + E
Sbjct: 72 TCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS----EDIYEQNVFQNGEPSEKLPIRW 166
+L + +++HRDL N+L++ ++++DFG+S + + +++ F G P P
Sbjct: 131 NFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAP-EV 188
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTL 196
+ E++ Y K+D+WS G+ L E+ +
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMAQI 218
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVK-MLKANADAKTYDKFLKE 67
PE L VLG+G +G V + G G AM+V K M+ NA + K E
Sbjct: 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKI--FAMKVLKKAMIVRNAKDTAHTK--AE 71
Query: 68 INLMKDVGKHDHIVSFI-GCCYKDELRLVVEYCALGDLQSYLREE--------------- 111
N++++V KH IV I +L L++EY + G+L L E
Sbjct: 72 RNILEEV-KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 112 -----YLSNNKVVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQNGEPSEKLPIR 165
+L +++RDL NI+L+ VK++DFGL E I++ V + I
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGT----IE 186
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E L+ + + D WS G ++++++T GA P+
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLT-GAPPF 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 40/210 (19%)
Query: 13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
I+GE LG G FG V K + + A K+++ ++ + D ++ EI ++
Sbjct: 15 IVGE-LGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELED-YIVEIEILA 63
Query: 73 DVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE--------------------- 110
H +IV +G Y D +L +++E+C G + + + E
Sbjct: 64 TCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 122
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS----EDIYEQNVFQNGEPSEKLPIRW 166
+L + +++HRDL N+L++ ++++DFG+S + + +++ F G P P
Sbjct: 123 NFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAP-EV 180
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTL 196
+ E++ Y K+D+WS G+ L E+ +
Sbjct: 181 VMCETMKDTPYDYKADIWSLGITLIEMAQI 210
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 35/182 (19%)
Query: 46 EVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGD 103
EVA+K++ K + + K +E+ +MK + H +IV ++ L L++EY + G+
Sbjct: 42 EVAIKIIDKTQLNPTSLQKLFREVRIMK-ILNHPNIVKLFEVIETEKTLYLIMEYASGGE 100
Query: 104 LQSYL---------------RE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+ YL R+ +Y ++VHRDL N+LL + +KI+DFG
Sbjct: 101 VFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGF 160
Query: 144 SEDIY---EQNVFQNGEPSEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGAN 199
S + + + F P + A E Y + DVWS GV+L+ +V+ G+
Sbjct: 161 SNEFTVGGKLDAFCGAPP-------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSL 212
Query: 200 PY 201
P+
Sbjct: 213 PF 214
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 44/213 (20%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L +LG+G +GVV T +G+ VA+K ++ + L+EI ++K
Sbjct: 15 LKSLLGEGAYGVVCSA------THKPTGEI---VAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 74 VGKHDHIVSFIGCCYKDELR-----LVVEYCALGDLQSYLREEYLSNN------------ 116
KH++I++ D +++ DL + + LS++
Sbjct: 66 F-KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 117 -------KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP-------SEKL 162
V+HRDL N+L++S +K+ DFGL+ I +++ N EP +E +
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGMTEYV 183
Query: 163 PIRWLALES--LVSNIYTNKSDVWSFGVVLWEI 193
RW L S Y+ DVWS G +L E+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 39/212 (18%)
Query: 10 ERLILGEVLGQGEFG--VVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
E+ + + +G+G FG ++VK TE E+ + + +K ++ +E
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKS------TEDGRQYVIKEINISRM----SSKEREESRRE 73
Query: 68 INLMKDVGKHDHIVSFIGCCYKD-ELRLVVEYCALGDL---------------------- 104
+ ++ ++ KH +IV + ++ L +V++YC GDL
Sbjct: 74 VAVLANM-KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 105 QSYLREEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
Q L +++ + K++HRD+ ++NI L+ V++ DFG++ + + + P
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPY 190
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTL 196
+L+ E + Y NKSD+W+ G VL+E+ TL
Sbjct: 191 -YLSPEICENKPYNNKSDIWALGCVLYELCTL 221
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 35/182 (19%)
Query: 46 EVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGD 103
EVA+K++ K + + K +E+ +MK + H +IV ++ L L++EY + G+
Sbjct: 39 EVAIKIIDKTQLNPTSLQKLFREVRIMK-ILNHPNIVKLFEVIETEKTLYLIMEYASGGE 97
Query: 104 LQSYL---------------RE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+ YL R+ +Y ++VHRDL N+LL + +KI+DFG
Sbjct: 98 VFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGF 157
Query: 144 SEDIY---EQNVFQNGEPSEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGAN 199
S + + + F P + A E Y + DVWS GV+L+ +V+ G+
Sbjct: 158 SNEFTVGGKLDTFCGSPP-------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSL 209
Query: 200 PY 201
P+
Sbjct: 210 PF 211
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 42/168 (25%)
Query: 64 FLKEINLMKDVGKHDHIVSF---IGCCYKDELRLVVEYCALGDLQS----------YLRE 110
+ E+NL++++ KH +IV + I L +V+EYC GDL S YL E
Sbjct: 52 LVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 111 EYL-------------------SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQN 151
E++ + V+HRDL N+ L VK+ DFGL+ +
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170
Query: 152 VFQN---GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTL 196
F G P +++ E + Y KSD+WS G +L+E+ L
Sbjct: 171 SFAKAFVGTPY------YMSPEQMNRMSYNEKSDIWSLGCLLYELCAL 212
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 33/181 (18%)
Query: 46 EVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGD 103
EVAVK++ K + + K +E+ +MK + H +IV ++ L LV+EY + G+
Sbjct: 42 EVAVKIIDKTQLNPTSLQKLFREVRIMK-ILNHPNIVKLFEVIETEKTLYLVMEYASGGE 100
Query: 104 LQSYL---------------RE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+ YL R+ +Y +VHRDL N+LL +KI+DFG
Sbjct: 101 VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGF 160
Query: 144 SEDIYEQNVFQN--GEPSEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANP 200
S + N G P + A E Y + DVWS GV+L+ +V+ G+ P
Sbjct: 161 SNEFTVGNKLDTFCGSPP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLP 213
Query: 201 Y 201
+
Sbjct: 214 F 214
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 42/168 (25%)
Query: 64 FLKEINLMKDVGKHDHIVSF---IGCCYKDELRLVVEYCALGDLQS----------YLRE 110
+ E+NL++++ KH +IV + I L +V+EYC GDL S YL E
Sbjct: 52 LVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 111 EYL-------------------SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQN 151
E++ + V+HRDL N+ L VK+ DFGL+ +
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170
Query: 152 VFQN---GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTL 196
F G P +++ E + Y KSD+WS G +L+E+ L
Sbjct: 171 SFAKTFVGTPY------YMSPEQMNRMSYNEKSDIWSLGCLLYELCAL 212
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 104/240 (43%), Gaps = 62/240 (25%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLK-ANADAKTYDKFLKEI 68
+ L L E++G+G +G V KG L + P VAVK+ AN +K + +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERP-----------VAVKVFSFANRQNFINEKNIYRV 61
Query: 69 NLMKDVGKHDHIVSFI------GCCYKDELRLVVEYCALGDLQSYLR---EEYLSNNK-- 117
LM+ HD+I FI + E LV+EY G L YL +++S+ +
Sbjct: 62 PLME----HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLA 117
Query: 118 -----------------------VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
+ HRDL +RN+L+ + ISDFGLS + + +
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVR 177
Query: 155 NGEP-----SEKLPIRWLALESL--VSNIYTNKS-----DVWSFGVVLWEIVTLGANPYP 202
GE SE IR++A E L N+ +S D+++ G++ WEI + +P
Sbjct: 178 PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 44/213 (20%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L +LG+G +GVV T +G+ VA+K ++ + L+EI ++K
Sbjct: 15 LKSLLGEGAYGVVCSA------THKPTGEI---VAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 74 VGKHDHIVSFIGCCYKDELR-----LVVEYCALGDLQSYLREEYLSNN------------ 116
KH++I++ D +++ DL + + LS++
Sbjct: 66 F-KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 117 -------KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPS-------EKL 162
V+HRDL N+L++S +K+ DFGL+ I +++ N EP+ E +
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGMVEFV 183
Query: 163 PIRWLALES--LVSNIYTNKSDVWSFGVVLWEI 193
RW L S Y+ DVWS G +L E+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 34/174 (19%)
Query: 47 VAVKMLK--ANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELR-LVVEYC--AL 101
VA+K + + + +KE+ ++ + +H + + + GC ++ LV+EYC +
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCLGSA 140
Query: 102 GDL----QSYLRE--------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
DL + L+E YL ++ ++HRD+ NILLS P +VK+ DFG
Sbjct: 141 SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGS 200
Query: 144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIV 194
+ + N F G P W+A E +++ Y K DVWS G+ E+
Sbjct: 201 ASIMAPANXFV-GTPY------WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 47/222 (21%)
Query: 13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD---KFLKEIN 69
ILG+ LG G FG V G +VAVK+L ++ D K +EI
Sbjct: 19 ILGDTLGVGTFGKV---------KVGKHELTGHKVAVKILNRQK-IRSLDVVGKIRREIQ 68
Query: 70 LMKDVGKHDHIVSFIGC-CYKDELRLVVEYCALGDLQSYLRE------------------ 110
+K + +H HI+ ++ +V+EY + G+L Y+ +
Sbjct: 69 NLK-LFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS 127
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRW 166
+Y + VVHRDL N+LL + KI+DFGLS + + + G P+ +
Sbjct: 128 GVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPN------Y 181
Query: 167 LALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANPY--PHIP 205
A E + +Y + D+WS GV+L+ ++ G P+ H+P
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLC-GTLPFDDDHVP 222
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 53/247 (21%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P E+L +GE++G+G FG V G+ EVA++++ D + K K
Sbjct: 31 PFEQLEIGELIGKGRFGQVY------------HGRWHGEVAIRLIDIERDNEDQLKAFKR 78
Query: 68 INLMKDVGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLREE--------------- 111
+ +H+++V F+G C L ++ C L S +R+
Sbjct: 79 EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQE 138
Query: 112 ------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
YL ++H+DL ++N+ + VV I+DFGL V Q G +KL I+
Sbjct: 139 IVKGMGYLHAKGILHKDLKSKNVFYDNGKVV-ITDFGL---FSISGVLQAGRREDKLRIQ 194
Query: 166 --WLA------LESLVSNI------YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVH 211
WL + L + ++ SDV++ G + +E+ P+ P I+
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR-EWPFKTQPAEAIIW 253
Query: 212 YLSTGYR 218
+ TG +
Sbjct: 254 QMGTGMK 260
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 42/168 (25%)
Query: 64 FLKEINLMKDVGKHDHIVSF---IGCCYKDELRLVVEYCALGDLQS----------YLRE 110
+ E+NL++++ KH +IV + I L +V+EYC GDL S YL E
Sbjct: 52 LVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 111 EYL-------------------SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQN 151
E++ + V+HRDL N+ L VK+ DFGL+ +
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE 170
Query: 152 VFQN---GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTL 196
F G P +++ E + Y KSD+WS G +L+E+ L
Sbjct: 171 DFAKEFVGTPY------YMSPEQMNRMSYNEKSDIWSLGCLLYELCAL 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 45/221 (20%)
Query: 13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINL 70
+LG+ LG G FG V G +VAVK+L K +EI
Sbjct: 14 VLGDTLGVGTFGKV---------KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 71 MKDVGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLRE------------------- 110
+K + +H HI+ + +V+EY + G+L Y+ +
Sbjct: 65 LK-LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA 123
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRWL 167
+Y + VVHRDL N+LL + KI+DFGLS + + ++ G P+ P
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAP---- 179
Query: 168 ALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANPY--PHIP 205
E + +Y + D+WS GV+L+ ++ G P+ H+P
Sbjct: 180 --EVISGRLYAGPEVDIWSCGVILYALLC-GTLPFDDEHVP 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 106/217 (48%), Gaps = 43/217 (19%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQ--AAMEVAVKMLKANADAKTYDKFLKEINLM 71
+GE LG G+F +V K + +G+ AA + + L ++ + ++ +E+N++
Sbjct: 9 MGEELGSGQFAIVRKC------RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 72 KDVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE------------------- 111
+++ +H +I++ K ++ L++E + G+L +L E+
Sbjct: 63 REI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 112 -YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPI 164
YL + ++ H DL NI+L +V +K+ DFG++ I N F+N G P
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE----- 176
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 177 -FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 211
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 46/214 (21%)
Query: 9 PERLI--LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLK--ANADAKTYDKF 64
PE+L L E+ G G FG V + + VA+K + + +
Sbjct: 13 PEKLFSDLREI-GHGSFGAVYFA---------RDVRNSEVVAIKKMSYSGKQSNEKWQDI 62
Query: 65 LKEINLMKDVGKHDHIVSFIGCCYKDELR-LVVEYC--ALGDL----QSYLRE------- 110
+KE+ ++ + +H + + + GC ++ LV+EYC + DL + L+E
Sbjct: 63 IKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT 121
Query: 111 -------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLP 163
YL ++ ++HRD+ NILLS P +VK+ DFG + + N F G P
Sbjct: 122 HGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-GTPY---- 176
Query: 164 IRWLALESLVS---NIYTNKSDVWSFGVVLWEIV 194
W+A E +++ Y K DVWS G+ E+
Sbjct: 177 --WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 42/191 (21%)
Query: 45 MEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGD 103
MEV + L + + +E ++++ V H HI++ I + LV + G+
Sbjct: 127 MEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 104 LQSYLREE--------------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
L YL E+ +L N +VHRDL NILL +++SDFG
Sbjct: 187 LFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF 246
Query: 144 SEDIYEQNVFQNGEPSEKL-----PIRWLALESLVSNI------YTNKSDVWSFGVVLWE 192
S + EP EKL +LA E L ++ Y + D+W+ GV+L+
Sbjct: 247 SCHL---------EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFT 297
Query: 193 IVTLGANPYPH 203
++ G+ P+ H
Sbjct: 298 LLA-GSPPFWH 307
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 45/221 (20%)
Query: 13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINL 70
+LG+ LG G FG V G +VAVK+L K +EI
Sbjct: 14 VLGDTLGVGTFGKV---------KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 71 MKDVGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLRE------------------- 110
+K + +H HI+ + +V+EY + G+L Y+ +
Sbjct: 65 LK-LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA 123
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRWL 167
+Y + VVHRDL N+LL + KI+DFGLS + + + G P+ P
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP---- 179
Query: 168 ALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANPY--PHIP 205
E + +Y + D+WS GV+L+ ++ G P+ H+P
Sbjct: 180 --EVISGRLYAGPEVDIWSCGVILYALLC-GTLPFDDEHVP 217
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 40/217 (18%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E IL ++LG+G FG V L T A++ V ++ + + +K
Sbjct: 17 EDFILHKMLGKGSFGKVF--LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK-----R 69
Query: 70 LMKDVGKHDHIVSFIGCCY--KDELRLVVEYCALGDLQSYLRE----------------- 110
++ +H ++ + C + K+ L V+EY GDL +++
Sbjct: 70 VLSLAWEHP-FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII 128
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKLPI 164
++L + +V+RDL NILL +KI+DFG+ ++ + N G P
Sbjct: 129 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPD----- 183
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E L+ Y + D WSFGV+L+E++ +G +P+
Sbjct: 184 -YIAPEILLGQKYNHSVDWWSFGVLLYEML-IGQSPF 218
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 106/217 (48%), Gaps = 43/217 (19%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQ--AAMEVAVKMLKANADAKTYDKFLKEINLM 71
+GE LG G+F +V K + +G+ AA + + L ++ + ++ +E+N++
Sbjct: 16 MGEELGSGQFAIVRKC------RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 69
Query: 72 KDVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE------------------- 111
+++ +H +I++ K ++ L++E + G+L +L E+
Sbjct: 70 REI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 128
Query: 112 -YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPI 164
YL + ++ H DL NI+L +V +K+ DFG++ I N F+N G P
Sbjct: 129 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE----- 183
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 184 -FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 218
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 52/219 (23%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVK-MLKANADAKTYDKFLKEINLMKDVGK 76
LG+G +G+V K + + +G+ VAVK + A ++ + +EI ++ ++
Sbjct: 17 LGKGAYGIVWKSI------DRRTGEV---VAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 77 HDHIVSFIGCCYKDELR---LVVEYCALGDLQSYLRE-------------------EYLS 114
H++IV+ + D R LV +Y DL + +R +YL
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYE-----QNV----------FQNGEP- 158
+ ++HRD+ NILL++ VK++DFGLS N+ F + +P
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 159 -SEKLPIRWLALESLV--SNIYTNKSDVWSFGVVLWEIV 194
++ + RW ++ S YT D+WS G +L EI+
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 48/223 (21%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G GVV K + P+ + +A K++ ++ ++E+ ++ +
Sbjct: 17 LGAGNGGVVFK--VSHKPS-------GLVMARKLIHLEIKPAIRNQIIRELQVLHECNS- 66
Query: 78 DHIVSFIGCCYKD-ELRLVVEYCALGDLQ-------------------------SYLREE 111
+IV F G Y D E+ + +E+ G L +YLRE+
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR-WLALE 170
+ K++HRD+ NIL++S +K+ DFG+S + ++ +E + R +++ E
Sbjct: 127 H----KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA------NEFVGTRSYMSPE 176
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYL 213
L Y+ +SD+WS G+ L E+ +G P P + + ++ Y+
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEM-AVGRYPRPPMAIFELLDYI 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 106/217 (48%), Gaps = 43/217 (19%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQ--AAMEVAVKMLKANADAKTYDKFLKEINLM 71
+GE LG G+F +V K + +G+ AA + + L ++ + ++ +E+N++
Sbjct: 30 MGEELGSGQFAIVRKC------RQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 72 KDVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE------------------- 111
+++ +H +I++ K ++ L++E + G+L +L E+
Sbjct: 84 REI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 112 -YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPI 164
YL + ++ H DL NI+L +V +K+ DFG++ I N F+N G P
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE----- 197
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 198 -FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 232
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 11 RLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINL 70
+ ++G++LG+G +G V + L + A + ++ A+ K KEI L
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVK------KEIQL 59
Query: 71 MKDVGKHDHIVSFIGCCYKDE---LRLVVEYCALGDLQSYLRE----------------- 110
++ + +H +++ + Y +E + +V+EYC G +Q L
Sbjct: 60 LRRL-RHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQ 117
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLP-I 164
EYL + +VH+D+ N+LL++ +KIS G++E ++ S+ P
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ + + + K D+WS GV L+ I T G P+
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITT-GLYPF 213
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 39/218 (17%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEV-AVKMLKANADAKTYDKFLKE 67
P + L +VLGQG FG V + SG A ++ A+K+LK A K D+ +
Sbjct: 23 PSQFELLKVLGQGSFGKVF-------LVKKISGSDARQLYAMKVLK-KATLKVRDRVRTK 74
Query: 68 I--NLMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQSYLREE------------ 111
+ +++ +V H IV + ++ E L L++++ GDL + L +E
Sbjct: 75 MERDILVEVN-HPFIVK-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLP 163
+L + +++RDL NILL +K++DFGLS++ + + S
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH---EKKAYSFCGT 189
Query: 164 IRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ ++A E + +T +D WSFGV+++E++T G P+
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPF 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 39/218 (17%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEV-AVKMLKANADAKTYDKFLKE 67
P + L +VLGQG FG V + SG A ++ A+K+LK A K D+ +
Sbjct: 24 PSQFELLKVLGQGSFGKVF-------LVKKISGSDARQLYAMKVLK-KATLKVRDRVRTK 75
Query: 68 I--NLMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQSYLREE------------ 111
+ +++ +V H IV + ++ E L L++++ GDL + L +E
Sbjct: 76 MERDILVEVN-HPFIVK-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 133
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLP 163
+L + +++RDL NILL +K++DFGLS++ + + S
Sbjct: 134 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH---EKKAYSFCGT 190
Query: 164 IRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ ++A E + +T +D WSFGV+++E++T G P+
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPF 227
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 39/218 (17%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEV-AVKMLKANADAKTYDKFLK- 66
P + L +VLGQG FG V + SG A ++ A+K+LK A K D+
Sbjct: 23 PSQFELLKVLGQGSFGKVFL-------VKKISGSDARQLYAMKVLK-KATLKVRDRVRTK 74
Query: 67 -EINLMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQSYLREE------------ 111
E +++ +V H IV + ++ E L L++++ GDL + L +E
Sbjct: 75 MERDILVEVN-HPFIVK-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLP 163
+L + +++RDL NILL +K++DFGLS++ + + S
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH---EKKAYSFCGT 189
Query: 164 IRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ ++A E + +T +D WSFGV+++E++T G P+
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPF 226
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 93 RLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYE 149
RL C L Q L +YL N ++HRDL N+LLSS ++KI+DFG S+ + E
Sbjct: 116 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 175
Query: 150 QNVFQN--GEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ + G P+ +LA E LVS Y D WS GV+L+ I G P+
Sbjct: 176 TSLMRTLCGTPT------YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 93 RLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYE 149
RL C L Q L +YL N ++HRDL N+LLSS ++KI+DFG S+ + E
Sbjct: 110 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
Query: 150 QNVFQN--GEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ + G P+ +LA E LVS Y D WS GV+L+ I G P+
Sbjct: 170 TSLMRTLCGTPT------YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 219
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 93 RLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYE 149
RL C L Q L +YL N ++HRDL N+LLSS ++KI+DFG S+ + E
Sbjct: 110 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
Query: 150 QNVFQN--GEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ + G P+ +LA E LVS Y D WS GV+L+ I G P+
Sbjct: 170 TSLMRTLCGTPT------YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 93 RLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYE 149
RL C L Q L +YL N ++HRDL N+LLSS ++KI+DFG S+ + E
Sbjct: 110 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
Query: 150 QNVFQN--GEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ + G P+ +LA E LVS Y D WS GV+L+ I G P+
Sbjct: 170 TSLMRTLCGTPT------YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 219
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 39/204 (19%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDV 74
E +G+G +GVV K A VA+K ++ +A D ++EI+L+K++
Sbjct: 27 EKVGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 75 GKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE---------------------Y 112
H +IVS I + + L LV E+ DL+ L E +
Sbjct: 77 -HHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
++++HRDL +N+L++S +K++DFGL+ + E + + + A + L
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLARAF---GIPVRSYTHEVVTLWYRAPDVL 191
Query: 173 V-SNIYTNKSDVWSFGVVLWEIVT 195
+ S Y+ D+WS G + E++T
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 93 RLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYE 149
RL C L Q L +YL N ++HRDL N+LLSS ++KI+DFG S+ + E
Sbjct: 109 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 168
Query: 150 QNVFQN--GEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ + G P+ +LA E LVS Y D WS GV+L+ I G P+
Sbjct: 169 TSLMRTLCGTPT------YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 41/221 (18%)
Query: 6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKF 64
G ER + +LG+G FG V+K D T+ E AVK++ KA+A K
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLK--CKDRITQ-------QEYAVKVINKASAKNKDTSTI 68
Query: 65 LKEINLMKDVGKHDHIVSF------------IGCCYK-----DEL----RLVVEYCALGD 103
L+E+ L+K + H +I+ +G Y DE+ R A
Sbjct: 69 LREVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 104 LQSYLREEYLSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDIYEQNVFQNGEPSE 160
Q + Y+ + +VHRDL NILL S +KI DFGLS QN + +
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-----QNTKMKD 182
Query: 161 KLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ + ++ Y K DVWS GV+L+ I+ G P+
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKCDVWSAGVILY-ILLSGTPPF 222
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 39/216 (18%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
+R + G LG+G F + + D T+ + ++ +LK + +K EI
Sbjct: 42 KRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSM-LLKPHQK----EKMSTEIA 94
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDL---------------QSYLRE--- 110
+ K + + H+V F G D+ VV E C L + ++R+
Sbjct: 95 IHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY---EQNVFQNGEPSEKLPIR 165
+YL NN+V+HRDL N+ L+ VKI DFGL+ I E+ G P+
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPN------ 207
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E L ++ + D+WS G +L+ ++ +G P+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLL-VGKPPF 242
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 48/224 (21%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKF-LKEINLMKDVG 75
++G+G +G+V+K D +G+ VA+K + D K K ++EI L+K +
Sbjct: 32 LVGEGSYGMVMKCRNKD------TGRI---VAIKKFLESDDDKMVKKIAMREIKLLKQL- 81
Query: 76 KHDHIVSFIGCCYKDE----LRLVVEYCALGDL------------QSYLRE-----EYLS 114
+H+++V+ + C K + + V++ L DL Q YL + +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH 141
Query: 115 NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-ALESLV 173
++ ++HRD+ NIL+S VVK+ DFG + + + E + RW A E LV
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE----VATRWYRAPELLV 197
Query: 174 SNI-YTNKSDVWSFGVVLWEIVTLGANPYP---------HIPLC 207
++ Y DVW+ G ++ E+ +G +P HI +C
Sbjct: 198 GDVKYGKAVDVWAIGCLVTEMF-MGEPLFPGDSDIDQLYHIMMC 240
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 41/221 (18%)
Query: 6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKF 64
G ER + +LG+G FG V+K D T+ E AVK++ KA+A K
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLK--CKDRITQ-------QEYAVKVINKASAKNKDTSTI 68
Query: 65 LKEINLMKDVGKHDHIVSF------------IGCCYK-----DEL----RLVVEYCALGD 103
L+E+ L+K + H +I+ +G Y DE+ R A
Sbjct: 69 LREVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 104 LQSYLREEYLSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDIYEQNVFQNGEPSE 160
Q + Y+ + +VHRDL NILL S +KI DFGLS QN + +
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-----QNTKMKD 182
Query: 161 KLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ + ++ Y K DVWS GV+L+ I+ G P+
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKCDVWSAGVILY-ILLSGTPPF 222
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 39/204 (19%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDV 74
E +G+G +GVV K A VA+K ++ +A D ++EI+L+K++
Sbjct: 27 EKVGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 75 GKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE---------------------Y 112
H +IVS I + + L LV E+ DL+ L E +
Sbjct: 77 -HHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
++++HRDL +N+L++S +K++DFGL+ + E + + + A + L
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLARAF---GIPVRSYTHEVVTLWYRAPDVL 191
Query: 173 V-SNIYTNKSDVWSFGVVLWEIVT 195
+ S Y+ D+WS G + E++T
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 38/202 (18%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKF-LKEINLMKDVGK 76
+G+G +GVV K D +GQ VA+K + D K L+EI ++K + K
Sbjct: 11 IGEGSYGVVFKCRNRD------TGQI---VAIKKFLESEDDPVIKKIALREIRMLKQL-K 60
Query: 77 HDHIVSFIGCCY-KDELRLVVEYC---ALGDLQSYLRE-----------------EYLSN 115
H ++V+ + K L LV EYC L +L Y R +
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 116 NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-ALESLVS 174
+ +HRD+ NIL++ V+K+ DFG + + + + + E + RW + E LV
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE----VATRWYRSPELLVG 176
Query: 175 NI-YTNKSDVWSFGVVLWEIVT 195
+ Y DVW+ G V E+++
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLS 198
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 39/216 (18%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
+R + G LG+G F + + D T+ + ++ +LK + +K EI
Sbjct: 42 KRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSM-LLKPHQK----EKMSTEIA 94
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDL---------------QSYLRE--- 110
+ K + + H+V F G D+ VV E C L + ++R+
Sbjct: 95 IHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY---EQNVFQNGEPSEKLPIR 165
+YL NN+V+HRDL N+ L+ VKI DFGL+ I E+ G P+
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPN------ 207
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E L ++ + D+WS G +L+ ++ +G P+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLL-VGKPPF 242
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 43/222 (19%)
Query: 6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKF 64
G ER + +LG+G FG V+K D T+ E AVK++ KA+A K
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLK--CKDRITQ-------QEYAVKVINKASAKNKDTSTI 68
Query: 65 LKEINLMKDVGKHDHIVSF------------IGCCYK-----DEL----RLVVEYCALGD 103
L+E+ L+K + H +I+ +G Y DE+ R A
Sbjct: 69 LREVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 104 LQSYLREEYLSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDIYEQNVFQ-NGEPS 159
Q + Y+ + +VHRDL NILL S +KI DFGLS FQ N +
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS------TCFQQNTKMK 181
Query: 160 EKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+++ + ++ Y K DVWS GV+L+ I+ G P+
Sbjct: 182 DRIGTAYYIAPEVLRGTYDEKCDVWSAGVILY-ILLSGTPPF 222
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 32/164 (19%)
Query: 62 DKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDL---------------Q 105
+K EI++ + + H H+V F G ++ VV E C L +
Sbjct: 86 EKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR 144
Query: 106 SYLRE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY---EQNVFQNGE 157
YLR+ +YL N+V+HRDL N+ L+ VKI DFGL+ + E+ G
Sbjct: 145 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 204
Query: 158 PSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
P+ ++A E L ++ + DVWS G +++ ++ +G P+
Sbjct: 205 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPF 241
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 33/181 (18%)
Query: 46 EVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGD 103
EVAVK++ K ++ + K +E+ + K V H +IV ++ L LV EY + G+
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIXK-VLNHPNIVKLFEVIETEKTLYLVXEYASGGE 99
Query: 104 LQSYL---------------RE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL 143
+ YL R+ +Y +VHRDL N+LL + +KI+DFG
Sbjct: 100 VFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGF 159
Query: 144 SEDIYEQNVFQN--GEPSEKLPIRWLALESLVSNIYTN-KSDVWSFGVVLWEIVTLGANP 200
S + N G P + A E Y + DVWS GV+L+ +V+ G+ P
Sbjct: 160 SNEFTFGNKLDAFCGAPP------YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLP 212
Query: 201 Y 201
+
Sbjct: 213 F 213
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 32/164 (19%)
Query: 62 DKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDL---------------Q 105
+K EI++ + + H H+V F G ++ VV E C L +
Sbjct: 84 EKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR 142
Query: 106 SYLRE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY---EQNVFQNGE 157
YLR+ +YL N+V+HRDL N+ L+ VKI DFGL+ + E+ G
Sbjct: 143 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 202
Query: 158 PSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
P+ ++A E L ++ + DVWS G +++ ++ +G P+
Sbjct: 203 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPF 239
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
LGE+ G+G +G V K + SGQ +AVK +++ D K + L +++++
Sbjct: 27 LGEI-GRGAYGSVNKMV------HKPSGQI---MAVKRIRSTVDEKEQKQLLMDLDVVMR 76
Query: 74 VGKHDHIVSFIGCCYKD-ELRLVVE-------------YCALGDLQSYLREEYL------ 113
+IV F G +++ + + +E Y L D+ + EE L
Sbjct: 77 SSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV---IPEEILGKITLA 133
Query: 114 ---------SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
N K++HRD+ NILL +K+ DFG+S + +
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMA 193
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
S Y +SDVWS G+ L+E+ T G PYP
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELAT-GRFPYP 230
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 39/208 (18%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 12 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREEYLS------------------- 114
H +IV + + +++L LV E+ ++ DL+ ++ L+
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 115 ---NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 177
Query: 172 LVS-NIYTNKSDVWSFGVVLWEIVTLGA 198
L+ Y+ D+WS G + E+VT A
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 32/164 (19%)
Query: 62 DKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDL---------------Q 105
+K EI++ + + H H+V F G ++ VV E C L +
Sbjct: 60 EKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR 118
Query: 106 SYLRE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY---EQNVFQNGE 157
YLR+ +YL N+V+HRDL N+ L+ VKI DFGL+ + E+ G
Sbjct: 119 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 178
Query: 158 PSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
P+ ++A E L ++ + DVWS G +++ ++ +G P+
Sbjct: 179 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPF 215
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 39/208 (18%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 11 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREEYLS------------------- 114
H +IV + + +++L LV E+ ++ DL+ ++ L+
Sbjct: 62 N-HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 115 ---NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 176
Query: 172 LVS-NIYTNKSDVWSFGVVLWEIVTLGA 198
L+ Y+ D+WS G + E+VT A
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 32/164 (19%)
Query: 62 DKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDL---------------Q 105
+K EI++ + + H H+V F G ++ VV E C L +
Sbjct: 66 EKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR 124
Query: 106 SYLRE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY---EQNVFQNGE 157
YLR+ +YL N+V+HRDL N+ L+ VKI DFGL+ + E+ G
Sbjct: 125 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 184
Query: 158 PSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
P+ ++A E L ++ + DVWS G +++ ++ +G P+
Sbjct: 185 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPF 221
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 37/217 (17%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLK-- 66
P L +VLGQG FG V L T SG A+K+LK A K D+
Sbjct: 27 PSHFELLKVLGQGSFGKV---FLVRKVTRPDSGHL---YAMKVLK-KATLKVRDRVRTKM 79
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQSYLREE------------- 111
E +++ DV H +V + ++ E L L++++ GDL + L +E
Sbjct: 80 ERDILADVN-HPFVVK-LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 137
Query: 112 -------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
+L + +++RDL NILL +K++DFGLS++ + + S +
Sbjct: 138 ELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDH---EKKAYSFCGTV 194
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + +++ +D WS+GV+++E++T G+ P+
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLT-GSLPF 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 32/164 (19%)
Query: 62 DKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDL---------------Q 105
+K EI++ + + H H+V F G ++ VV E C L +
Sbjct: 62 EKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR 120
Query: 106 SYLRE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY---EQNVFQNGE 157
YLR+ +YL N+V+HRDL N+ L+ VKI DFGL+ + E+ G
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 158 PSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
P+ ++A E L ++ + DVWS G +++ ++ +G P+
Sbjct: 181 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPF 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 32/164 (19%)
Query: 62 DKFLKEINLMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDL---------------Q 105
+K EI++ + + H H+V F G ++ VV E C L +
Sbjct: 62 EKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR 120
Query: 106 SYLRE-----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY---EQNVFQNGE 157
YLR+ +YL N+V+HRDL N+ L+ VKI DFGL+ + E+ G
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 158 PSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
P+ ++A E L ++ + DVWS G +++ ++ +G P+
Sbjct: 181 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPF 217
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 39/216 (18%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
+R + G LG+G F + + D T+ + ++ +LK + +K EI
Sbjct: 26 KRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSM-LLKPHQK----EKMSTEIA 78
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDL---------------QSYLRE--- 110
+ K + + H+V F G D+ VV E C L + ++R+
Sbjct: 79 IHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 137
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY---EQNVFQNGEPSEKLPIR 165
+YL NN+V+HRDL N+ L+ VKI DFGL+ I E+ G P+
Sbjct: 138 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN------ 191
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E L ++ + D+WS G +L+ ++ +G P+
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLL-VGKPPF 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 39/216 (18%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
+R + G LG+G F + + D T+ + ++ +LK + +K EI
Sbjct: 42 KRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSM-LLKPHQK----EKMSTEIA 94
Query: 70 LMKDVGKHDHIVSFIGCCYKDELRLVV-EYCALGDL---------------QSYLRE--- 110
+ K + + H+V F G D+ VV E C L + ++R+
Sbjct: 95 IHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY---EQNVFQNGEPSEKLPIR 165
+YL NN+V+HRDL N+ L+ VKI DFGL+ I E+ G P+
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN------ 207
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E L ++ + D+WS G +L+ ++ +G P+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLL-VGKPPF 242
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 39/208 (18%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 12 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREEYLS------------------- 114
H +IV + + +++L LV E+ ++ DL+ ++ L+
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 115 ---NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
+++V+HRDL N+L+++ +K++DFGL+ V E + + + A E
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 177
Query: 172 LVS-NIYTNKSDVWSFGVVLWEIVTLGA 198
L+ Y+ D+WS G + E+VT A
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 39/208 (18%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 10 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREEYLS------------------- 114
H +IV + + +++L LV E+ ++ DL+ ++ L+
Sbjct: 61 N-HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 115 ---NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
+++V+HRDL N+L+++ +K++DFGL+ V E + + + A E
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 175
Query: 172 LVS-NIYTNKSDVWSFGVVLWEIVTLGA 198
L+ Y+ D+WS G + E+VT A
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 93 RLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYE 149
RL C L Q L +YL N ++HRDL N+LLSS ++KI+DFG S+ + E
Sbjct: 235 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 294
Query: 150 QNVFQN--GEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ + G P+ +LA E LVS Y D WS GV+L+ I G P+
Sbjct: 295 TSLMRTLCGTPT------YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 344
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 45/214 (21%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEV--AVKMLKANADAKTYDK--F 64
P +V+G+G FG V+ + A EV AVK+L+ A K ++
Sbjct: 37 PSDFHFLKVIGKGSFGKVL-----------LARHKAEEVFYAVKVLQKKAILKKKEEKHI 85
Query: 65 LKEINLMKDVGKHDHIVSF-IGCCYKDELRLVVEYCALGDLQSYLREE------------ 111
+ E N++ KH +V D+L V++Y G+L +L+ E
Sbjct: 86 MSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYA 145
Query: 112 --------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSE 160
YL + +V+RDL NILL S + ++DFGL ++ E N + G P
Sbjct: 146 AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTP-- 203
Query: 161 KLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
+LA E L Y D W G VL+E++
Sbjct: 204 ----EYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 9 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 93 RLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYE 149
RL C L Q L +YL N ++HRDL N+LLSS ++KI+DFG S+ + E
Sbjct: 249 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 308
Query: 150 QNVFQN--GEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ + G P+ +LA E LVS Y D WS GV+L+ I G P+
Sbjct: 309 TSLMRTLCGTPT------YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 358
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 30/154 (19%)
Query: 70 LMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLRE----------------- 110
LM + H I+ G ++D ++ ++++Y G+L S LR+
Sbjct: 58 LMLSIVTHPFIIRMWGT-FQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
EYL + +++RDL NILL +KI+DFG ++ + + G P ++
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPD------YI 170
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E + + Y D WSFG++++E++ G P+
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLA-GYTPF 203
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 9 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 8 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 59 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 174
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 16 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 67 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 182
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
++L +++VVHRDL +NIL++S +K++DFGL+ IY FQ S + + + A E
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYS---FQMALTSVVVTLWYRAPE 189
Query: 171 SLVSNIYTNKSDVWSFGVVLWEI 193
L+ + Y D+WS G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 13 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 64 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 179
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 36/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
E L ++LG+G FG V L T A++ V ++ + + +K
Sbjct: 18 EDFELHKMLGKGSFGKVF--LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK-----R 70
Query: 70 LMKDVGKHDHIVSFIGCCY--KDELRLVVEYCALGDLQSYLRE----------------- 110
++ +H ++ + C + K+ L V+EY GDL +++
Sbjct: 71 VLSLAWEHP-FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII 129
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI-RW 166
++L + +V+RDL NILL +KI+DFG+ ++N+ + + +E +
Sbjct: 130 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC----KENMLGDAKTNEFCGTPDY 185
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+A E L+ Y + D WSFGV+L+E++ +G +P+
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEML-IGQSPF 219
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 62/265 (23%)
Query: 1 MALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKT 60
MAL +R + LG+G+F V K + + Q VA+K +K ++
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKA------RDKNTNQI---VAIKKIKLGHRSEA 51
Query: 61 YDKF----LKEINLMKDVGKHDHIVSFIGCC-YKDELRLVVEYCALGDLQSYLRE----- 110
D L+EI L++++ H +I+ + +K + LV ++ DL+ +++
Sbjct: 52 KDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVL 109
Query: 111 ----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
EYL + ++HRDL N+LL V+K++DFGL++
Sbjct: 110 TPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF------- 162
Query: 155 NGEPSE----KLPIRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP--- 205
G P+ ++ RW L+ + +Y D+W+ G +L E++ P +P
Sbjct: 163 -GSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLR----VPFLPGDS 217
Query: 206 ----LCRIVHYLSTGYRMERPASCN 226
L RI L T + P C+
Sbjct: 218 DLDQLTRIFETLGTPTEEQWPDMCS 242
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
++L +++VVHRDL +NIL++S +K++DFGL+ IY FQ S + + + A E
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYS---FQMALTSVVVTLWYRAPE 189
Query: 171 SLVSNIYTNKSDVWSFGVVLWEI 193
L+ + Y D+WS G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 112 YLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEP-SEKLPIRWL 167
YL + +VHRDL N+LL S ++KI DFGLS VF+N + E+L +
Sbjct: 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA------VFENQKKMKERLGTAYY 204
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG-YRMERP 222
++ Y K DVWS GV+L+ I+ G P+ I+ + G Y + P
Sbjct: 205 IAPEVLRKKYDEKCDVWSIGVILF-ILLAGYPPFGGQTDQEILRKVEKGKYTFDSP 259
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 8 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 59 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 174
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 9 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 11 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 62 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 177
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 9 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 175
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 16 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 67 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 182
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 13 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 64 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 179
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 8 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 59 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 174
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 12 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 178
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 11 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 62 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 177
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 10 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 61 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 176
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 9 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 173 V-SNIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 12 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 178
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 9 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 175
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 12 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 178
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 9 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 175
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 10 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 61 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 176
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 42/209 (20%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G GVV K + P+ + +A K++ ++ ++E+ ++ +
Sbjct: 24 LGAGNGGVVTK--VQHRPS-------GLIMARKLIHLEIKPAIRNQIIRELQVLHECNS- 73
Query: 78 DHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLREE--------------------YL-SN 115
+IV F G Y D E+ + +E+ G L L+E YL
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 116 NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ--NVFQNGEPSEKLPIRWLALESLV 173
++++HRD+ NIL++S +K+ DFG+S + + N F ++A E L
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-------SYMAPERLQ 186
Query: 174 SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
Y+ +SD+WS G+ L E+ +G P P
Sbjct: 187 GTHYSVQSDIWSMGLSLVEL-AVGRYPIP 214
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 42/212 (19%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGK 76
VLG+G +G+V G S Q + +A+K + D++ +EI L K + K
Sbjct: 29 VLGKGTYGIVYAG-------RDLSNQ--VRIAIKEI-PERDSRYSQPLHEEIALHKHL-K 77
Query: 77 HDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE-----------------------Y 112
H +IV ++G ++ +++ +E G L + LR + Y
Sbjct: 78 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKY 137
Query: 113 LSNNKVVHRDLATRNILLSS-PHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
L +N++VHRD+ N+L+++ V+KISDFG S+ + N + ++++A E
Sbjct: 138 LHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE---TFTGTLQYMAPEI 194
Query: 172 LVSNI--YTNKSDVWSFGVVLWEIVTLGANPY 201
+ Y +D+WS G + E+ T G P+
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMAT-GKPPF 225
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 10 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 61 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 176
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
++L +++VVHRDL +NIL++S +K++DFGL+ IY FQ S + + + A E
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYS---FQMALTSVVVTLWYRAPE 189
Query: 171 SLVSNIYTNKSDVWSFGVVLWEI 193
L+ + Y D+WS G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 50/213 (23%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G GVV K + P+ + +A K++ ++ ++E+ ++ +
Sbjct: 76 LGAGNGGVVFK--VSHKPS-------GLVMARKLIHLEIKPAIRNQIIRELQVLHECNS- 125
Query: 78 DHIVSFIGCCYKD-ELRLVVEYCALGDLQ-------------------------SYLREE 111
+IV F G Y D E+ + +E+ G L +YLRE+
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 185
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ--NVFQNGEPSEKLPIRWLAL 169
+ K++HRD+ NIL++S +K+ DFG+S + + N F +++
Sbjct: 186 H----KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-------SYMSP 234
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
E L Y+ +SD+WS G+ L E+ +G P P
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 266
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 41/209 (19%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTY---DKFLKEINLMK 72
E +G+G +GVV K A + EV V + K D +T ++EI+L+K
Sbjct: 9 EKIGEGTYGVVYK----------ARNKLTGEV-VALXKIRLDTETEGVPSTAIREISLLK 57
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE----- 110
++ H +IV + + +++L LV E+ L ++SYL +
Sbjct: 58 ELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+ +++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPE 173
Query: 171 SLVS-NIYTNKSDVWSFGVVLWEIVTLGA 198
L+ Y+ D+WS G + E+VT A
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 41/209 (19%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTY---DKFLKEINLMK 72
E +G+G +GVV K A + EV V + K D +T ++EI+L+K
Sbjct: 8 EKIGEGTYGVVYK----------ARNKLTGEV-VALXKIRLDTETEGVPSTAIREISLLK 56
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE----- 110
++ H +IV + + +++L LV E+ L ++SYL +
Sbjct: 57 ELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+ +++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPE 172
Query: 171 SLVS-NIYTNKSDVWSFGVVLWEIVTLGA 198
L+ Y+ D+WS G + E+VT A
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 8 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 59 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 174
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 8 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEYC----------------ALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 59 N-HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 174
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 42/212 (19%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGK 76
VLG+G +G+V G S Q + +A+K + D++ +EI L K + K
Sbjct: 15 VLGKGTYGIVYAG-------RDLSNQ--VRIAIKEI-PERDSRYSQPLHEEIALHKHL-K 63
Query: 77 HDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLREE-----------------------Y 112
H +IV ++G ++ +++ +E G L + LR + Y
Sbjct: 64 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKY 123
Query: 113 LSNNKVVHRDLATRNILLSS-PHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
L +N++VHRD+ N+L+++ V+KISDFG S+ + N + ++++A E
Sbjct: 124 LHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE---TFTGTLQYMAPEI 180
Query: 172 LVSNI--YTNKSDVWSFGVVLWEIVTLGANPY 201
+ Y +D+WS G + E+ T G P+
Sbjct: 181 IDKGPRGYGKAADIWSLGCTIIEMAT-GKPPF 211
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 9 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 175
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 50/213 (23%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G GVV K + P+ + +A K++ ++ ++E+ ++ +
Sbjct: 14 LGAGNGGVVFK--VSHKPS-------GLVMARKLIHLEIKPAIRNQIIRELQVLHECNS- 63
Query: 78 DHIVSFIGCCYKD-ELRLVVEYCALGDLQ-------------------------SYLREE 111
+IV F G Y D E+ + +E+ G L +YLRE+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ--NVFQNGEPSEKLPIRWLAL 169
+ K++HRD+ NIL++S +K+ DFG+S + + N F +++
Sbjct: 124 H----KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-------SYMSP 172
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
E L Y+ +SD+WS G+ L E+ +G P P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 204
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 49/214 (22%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK-FLKEINLMKDV 74
E +G G +GVV +GQ +VA+K + D T K L+E+ ++K
Sbjct: 61 ETIGNGAYGVVSSA------RRRLTGQ---QVAIKKIPNAFDVVTNAKRTLRELKILKHF 111
Query: 75 GKHDHIVSFIGCCYKDELRLVVEY-------CALGDLQSYLRE----------------- 110
KHD+I++ KD LR V Y L ++S L +
Sbjct: 112 -KHDNIIAI-----KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFL 165
Query: 111 -------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLP 163
+Y+ + +V+HRDL N+L++ +KI DFG++ + +E +
Sbjct: 166 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 164 IRWLALESLVSNI--YTNKSDVWSFGVVLWEIVT 195
RW L+ ++ YT D+WS G + E++
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 45/234 (19%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK--FLKEINLMKDV 74
VLG+G FG V+ L D T GQ E AVK++ + DK L+E+ L+K +
Sbjct: 56 VLGKGSFGEVI--LCKDKIT----GQ---ECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 75 GKHDHIVSF------------IGCCYK-----DELRLVVEYCALGDLQSYLRE-----EY 112
H +I+ +G Y DE+ + + D +R+ Y
Sbjct: 107 -DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITY 164
Query: 113 LSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+ NK+VHRDL N+LL S ++I DFGLS ++ K+ +
Sbjct: 165 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD-----KIGTAYYIA 219
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG-YRMERP 222
++ Y K DVWS GV+L+ I+ G P+ I+ + G Y E P
Sbjct: 220 PEVLHGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTFELP 272
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 45/234 (19%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK--FLKEINLMKDV 74
VLG+G FG V+ L D T GQ E AVK++ + DK L+E+ L+K +
Sbjct: 57 VLGKGSFGEVI--LCKDKIT----GQ---ECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 75 GKHDHIVSF------------IGCCYK-----DELRLVVEYCALGDLQSYLRE-----EY 112
H +I+ +G Y DE+ + + D +R+ Y
Sbjct: 108 -DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITY 165
Query: 113 LSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+ NK+VHRDL N+LL S ++I DFGLS ++ K+ +
Sbjct: 166 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD-----KIGTAYYIA 220
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG-YRMERP 222
++ Y K DVWS GV+L+ I+ G P+ I+ + G Y E P
Sbjct: 221 PEVLHGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTFELP 273
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 11 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 62 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 177
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 10 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 61 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 176
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 50/213 (23%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G GVV K + P+ + +A K++ ++ ++E+ ++ +
Sbjct: 14 LGAGNGGVVFK--VSHKPS-------GLVMARKLIHLEIKPAIRNQIIRELQVLHECNS- 63
Query: 78 DHIVSFIGCCYKD-ELRLVVEYCALGDLQ-------------------------SYLREE 111
+IV F G Y D E+ + +E+ G L +YLRE+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ--NVFQNGEPSEKLPIRWLAL 169
+ K++HRD+ NIL++S +K+ DFG+S + + N F +++
Sbjct: 124 H----KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-------SYMSP 172
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
E L Y+ +SD+WS G+ L E+ +G P P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 204
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 50/213 (23%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G GVV K + P+ + +A K++ ++ ++E+ ++ +
Sbjct: 14 LGAGNGGVVFK--VSHKPS-------GLVMARKLIHLEIKPAIRNQIIRELQVLHECNS- 63
Query: 78 DHIVSFIGCCYKD-ELRLVVEYCALGDLQ-------------------------SYLREE 111
+IV F G Y D E+ + +E+ G L +YLRE+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ--NVFQNGEPSEKLPIRWLAL 169
+ K++HRD+ NIL++S +K+ DFG+S + + N F +++
Sbjct: 124 H----KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-------SYMSP 172
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
E L Y+ +SD+WS G+ L E+ +G P P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 204
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 49/220 (22%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLK-----ANADAKTYDKFLKEI 68
+GE LG G+F +V K E ++G +E A K +K A+ + ++ +E+
Sbjct: 16 IGEELGSGQFAIVKKC------REKSTG---LEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE----------------- 111
++++ V H+ I + ++ L++E + G+L +L ++
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 112 ---YLSNNKVVHRDLATRNILLSS-----PHVVKISDFGLSEDIYEQNVFQN--GEPSEK 161
YL K+ H DL NI+L PH +K+ DFGL+ +I + F+N G P
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPE-- 183
Query: 162 LPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 184 ----FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 218
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 45/217 (20%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY--KDELRLVVEYCALGDLQSYLREE------------------- 111
++ +H ++++ + Y K ++ L++E A G+L +L E+
Sbjct: 70 EI-QHPNVIT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 112 -YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPI 164
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE----- 182
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 -FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 49/220 (22%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLK-----ANADAKTYDKFLKEI 68
+GE LG G+F +V K E ++G +E A K +K A+ + ++ +E+
Sbjct: 16 IGEELGSGQFAIVKKC------REKSTG---LEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE----------------- 111
++++ V H+ I + ++ L++E + G+L +L ++
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 112 ---YLSNNKVVHRDLATRNILLSS-----PHVVKISDFGLSEDIYEQNVFQN--GEPSEK 161
YL K+ H DL NI+L PH +K+ DFGL+ +I + F+N G P
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPE-- 183
Query: 162 LPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 184 ----FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 218
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 43/216 (19%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE-------------------- 111
++ +H ++++ K ++ L++E A G+L +L E+
Sbjct: 70 EI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 112 YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPIR 165
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA------ 182
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 49/220 (22%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLK-----ANADAKTYDKFLKEI 68
+GE LG G+F +V K E ++G +E A K +K A+ + ++ +E+
Sbjct: 16 IGEELGSGQFAIVKKC------REKSTG---LEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE----------------- 111
++++ V H+ I + ++ L++E + G+L +L ++
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 112 ---YLSNNKVVHRDLATRNILLSS-----PHVVKISDFGLSEDIYEQNVFQN--GEPSEK 161
YL K+ H DL NI+L PH +K+ DFGL+ +I + F+N G P
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPE-- 183
Query: 162 LPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 184 ----FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 218
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 9 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------------CALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 175
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK-TYDKFLKEINLMKDV 74
E +G+G +GVV K +G+ VA+K ++ + + + ++EI+L+K++
Sbjct: 12 EKIGEGTYGVVYKA------RNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEYC----------------ALGDLQSYLRE-----EY 112
H +IV + + +++L LV E+ L ++SYL + +
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+++V+HRDL +N+L+++ +K++DFGL+ V E + + + A E L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 178
Query: 173 VS-NIYTNKSDVWSFGVVLWEIVTLGA 198
+ Y+ D+WS G + E+VT A
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 45/217 (20%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY--KDELRLVVEYCALGDLQSYLREE------------------- 111
++ +H ++++ + Y K ++ L++E A G+L +L E+
Sbjct: 70 EI-QHPNVIT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 112 -YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPI 164
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE----- 182
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 -FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 45/234 (19%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK--FLKEINLMKDV 74
VLG+G FG V+ L D T GQ E AVK++ + DK L+E+ L+K +
Sbjct: 33 VLGKGSFGEVI--LCKDKIT----GQ---ECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 75 GKHDHIVSF------------IGCCYK-----DELRLVVEYCALGDLQSYLRE-----EY 112
H +I+ +G Y DE+ + + D +R+ Y
Sbjct: 84 D-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITY 141
Query: 113 LSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+ NK+VHRDL N+LL S ++I DFGLS + + + +K+ +
Sbjct: 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-----THFEASKKMKDKIGTAYYIA 196
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG-YRMERP 222
++ Y K DVWS GV+L+ I+ G P+ I+ + G Y E P
Sbjct: 197 PEVLHGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTFELP 249
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 44/212 (20%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK--FLKEINLMKDV 74
VLG+G FG V+ L D T GQ E AVK++ + DK L+E+ L+K +
Sbjct: 39 VLGKGSFGEVI--LCKDKIT----GQ---ECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 75 GKHDHIVSF------------IGCCYK-----DELRLVVEYCALGDLQSYLRE-----EY 112
H +I+ +G Y DE+ + + D +R+ Y
Sbjct: 90 D-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITY 147
Query: 113 LSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+ NK+VHRDL N+LL S ++I DFGLS ++ K+ +
Sbjct: 148 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD-----KIGTAYYIA 202
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ Y K DVWS GV+L+ I+ G P+
Sbjct: 203 PEVLHGTYDEKCDVWSTGVILY-ILLSGCPPF 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 50/213 (23%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G GVV K + P+ + +A K++ ++ ++E+ ++ +
Sbjct: 14 LGAGNGGVVFK--VSHKPS-------GLVMARKLIHLEIKPAIRNQIIRELQVLHECNS- 63
Query: 78 DHIVSFIGCCYKD-ELRLVVEYCALGDLQ-------------------------SYLREE 111
+IV F G Y D E+ + +E+ G L +YLRE+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ--NVFQNGEPSEKLPIRWLAL 169
+ K++HRD+ NIL++S +K+ DFG+S + + N F +++
Sbjct: 124 H----KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-------SYMSP 172
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
E L Y+ +SD+WS G+ L E+ +G P P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 204
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 50/213 (23%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G GVV K + P+ + +A K++ ++ ++E+ ++ +
Sbjct: 14 LGAGNGGVVFK--VSHKPS-------GLVMARKLIHLEIKPAIRNQIIRELQVLHECNS- 63
Query: 78 DHIVSFIGCCYKD-ELRLVVEYCALGDLQ-------------------------SYLREE 111
+IV F G Y D E+ + +E+ G L +YLRE+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ--NVFQNGEPSEKLPIRWLAL 169
+ K++HRD+ NIL++S +K+ DFG+S + + N F +++
Sbjct: 124 H----KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-------SYMSP 172
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
E L Y+ +SD+WS G+ L E+ +G P P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 204
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 45/217 (20%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY--KDELRLVVEYCALGDLQSYLREE------------------- 111
++ +H ++++ + Y K ++ L++E A G+L +L E+
Sbjct: 70 EI-QHPNVIT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 112 -YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPI 164
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE----- 182
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 -FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 49/220 (22%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLK-----ANADAKTYDKFLKEI 68
+GE LG G+F +V K E ++G +E A K +K A+ + ++ +E+
Sbjct: 16 IGEELGSGQFAIVKKC------REKSTG---LEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE----------------- 111
++++ V H+ I + ++ L++E + G+L +L ++
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 112 ---YLSNNKVVHRDLATRNILLSS-----PHVVKISDFGLSEDIYEQNVFQN--GEPSEK 161
YL K+ H DL NI+L PH +K+ DFGL+ +I + F+N G P
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPE-- 183
Query: 162 LPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 184 ----FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 218
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 50/213 (23%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G GVV K + P+ + +A K++ ++ ++E+ ++ +
Sbjct: 41 LGAGNGGVVFK--VSHKPS-------GLVMARKLIHLEIKPAIRNQIIRELQVLHECNS- 90
Query: 78 DHIVSFIGCCYKD-ELRLVVEYCALGDLQ-------------------------SYLREE 111
+IV F G Y D E+ + +E+ G L +YLRE+
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ--NVFQNGEPSEKLPIRWLAL 169
+ K++HRD+ NIL++S +K+ DFG+S + + N F +++
Sbjct: 151 H----KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-------SYMSP 199
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
E L Y+ +SD+WS G+ L E+ +G P P
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 231
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 49/220 (22%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLK-----ANADAKTYDKFLKEI 68
+GE LG G+F +V K E ++G +E A K +K A+ + ++ +E+
Sbjct: 16 IGEELGSGQFAIVKKC------REKSTG---LEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREE----------------- 111
++++ V H+ I + ++ L++E + G+L +L ++
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 112 ---YLSNNKVVHRDLATRNILLSS-----PHVVKISDFGLSEDIYEQNVFQN--GEPSEK 161
YL K+ H DL NI+L PH +K+ DFGL+ +I + F+N G P
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPE-- 183
Query: 162 LPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 184 ----FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 218
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 45/217 (20%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY--KDELRLVVEYCALGDLQSYLREE------------------- 111
++ +H ++++ + Y K ++ L++E A G+L +L E+
Sbjct: 70 EI-QHPNVIT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 112 -YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPI 164
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE----- 182
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 -FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 45/217 (20%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 15 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 73 DVGKHDHIVSFIGCCY--KDELRLVVEYCALGDLQSYLREE------------------- 111
++ +H ++++ + Y K ++ L++E A G+L +L E+
Sbjct: 69 EI-QHPNVIT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 112 -YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPI 164
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE----- 181
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 182 -FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 43/216 (19%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 15 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE-------------------- 111
++ +H ++++ K ++ L++E A G+L +L E+
Sbjct: 69 EI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 127
Query: 112 YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPIR 165
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE------ 181
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 43/216 (19%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE-------------------- 111
++ +H ++++ K ++ L++E A G+L +L E+
Sbjct: 70 EI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 112 YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPIR 165
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE------ 182
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 49/214 (22%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK-FLKEINLMKDV 74
E +G G +GVV +GQ +VA+K + D T K L+E+ ++K
Sbjct: 60 ETIGNGAYGVVSSA------RRRLTGQ---QVAIKKIPNAFDVVTNAKRTLRELKILKHF 110
Query: 75 GKHDHIVSFIGCCYKDELRLVVEY-------CALGDLQSYLRE----------------- 110
KHD+I++ KD LR V Y L ++S L +
Sbjct: 111 -KHDNIIAI-----KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFL 164
Query: 111 -------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLP 163
+Y+ + +V+HRDL N+L++ +KI DFG++ + +E +
Sbjct: 165 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 164 IRWLALESLVSNI--YTNKSDVWSFGVVLWEIVT 195
RW L+ ++ YT D+WS G + E++
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 43/216 (19%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE-------------------- 111
++ +H ++++ K ++ L++E A G+L +L E+
Sbjct: 70 EI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 112 YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPIR 165
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE------ 182
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 38/219 (17%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G + V KG S VA+K ++ + ++E++L+KD+ KH
Sbjct: 10 LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KH 59
Query: 78 DHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSN 115
+IV+ + ++ L LV EY DL+ YL + Y
Sbjct: 60 ANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 116 NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV-S 174
KV+HRDL +N+L++ +K++DFGL+ +++ +E + + + + L+ S
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVVTLWYRPPDILLGS 175
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYL 213
Y+ + D+W G + +E+ T G +P + +H++
Sbjct: 176 TDYSTQIDMWGVGCIFYEMAT-GRPLFPGSTVEEQLHFI 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 43/216 (19%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE-------------------- 111
++ +H ++++ K ++ L++E A G+L +L E+
Sbjct: 70 EI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 112 YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPIR 165
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE------ 182
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 45/217 (20%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGKFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY--KDELRLVVEYCALGDLQSYLREE------------------- 111
++ +H ++++ + Y K ++ L++E A G+L +L E+
Sbjct: 70 EI-QHPNVIT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 112 -YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPI 164
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE----- 182
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 -FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 43/216 (19%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE-------------------- 111
++ +H ++++ K ++ L++E A G+L +L E+
Sbjct: 70 EI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 112 YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPIR 165
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE------ 182
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 51/212 (24%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
+G+G G+V T +SG+ VAVK + + + E+ +M+D +H
Sbjct: 82 IGEGSTGIVCIA------TVRSSGKL---VAVKKMDLRKQQRR-ELLFNEVVIMRDY-QH 130
Query: 78 DHIVSFIGC-CYKDELRLVVEYC---ALGDLQSYLR--EEY--------------LSNNK 117
+++V DEL +V+E+ AL D+ ++ R EE L
Sbjct: 131 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 118 VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR--------WLAL 169
V+HRD+ + +ILL+ VK+SDFG + S+++P R W+A
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWMAP 239
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
E + Y + D+WS G+++ E+V G PY
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 270
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 69/257 (26%)
Query: 13 ILGEVLGQGEFGVVVKGLLGDGPT----EGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
+G+ + GE + V+ +L +G E + E A+K L +N + K ++E+
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN-RAIIQEV 76
Query: 69 NLMKDVGKHDHIVSF-----IGCCYKD----ELRLVVEYCALGDLQSYLRE--------- 110
MK + H +IV F IG D E L+ E C G L +L++
Sbjct: 77 CFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSC 135
Query: 111 --------------EYLSNNK--VVHRDLATRNILLSSPHVVKISDFGLSEDI------- 147
+++ K ++HRDL N+LLS+ +K+ DFG + I
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS 195
Query: 148 --------YEQNVFQNGEPSEKLPIRWLALESLVSNIYTN-----KSDVWSFGVVLWEIV 194
E+ + +N P + P + ++Y+N K D+W+ G +L+ ++
Sbjct: 196 WSAQRRALVEEEITRNTTPMYRTP--------EIIDLYSNFPIGEKQDIWALGCILY-LL 246
Query: 195 TLGANPYPHIPLCRIVH 211
+P+ RIV+
Sbjct: 247 CFRQHPFEDGAKLRIVN 263
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 51/212 (24%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
+G+G G+V T +SG+ VAVK + + + E+ +M+D +H
Sbjct: 159 IGEGSTGIVCIA------TVRSSGKL---VAVKKMDLRKQQR-RELLFNEVVIMRDY-QH 207
Query: 78 DHIVSFIGC-CYKDELRLVVEYC---ALGDLQSYLR--EEY--------------LSNNK 117
+++V DEL +V+E+ AL D+ ++ R EE L
Sbjct: 208 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 118 VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR--------WLAL 169
V+HRD+ + +ILL+ VK+SDFG + S+++P R W+A
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWMAP 316
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
E + Y + D+WS G+++ E+V G PY
Sbjct: 317 ELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 347
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 51/212 (24%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
+G+G G+V T +SG+ VAVK + + + E+ +M+D +H
Sbjct: 39 IGEGSTGIVCIA------TVRSSGKL---VAVKKMDLRKQQRR-ELLFNEVVIMRDY-QH 87
Query: 78 DHIVSFIGC-CYKDELRLVVEYC---ALGDLQSYLR--EE--------------YLSNNK 117
+++V DEL +V+E+ AL D+ ++ R EE L
Sbjct: 88 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 118 VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR--------WLAL 169
V+HRD+ + +ILL+ VK+SDFG + S+++P R W+A
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWMAP 196
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
E + Y + D+WS G+++ E+V G PY
Sbjct: 197 ELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 227
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 37 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 87
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V C DE L + Y G+L Y+R+
Sbjct: 88 RDVMSRLD-HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 146
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 147 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 205
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 239
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 51/212 (24%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
+G+G G+V T +SG+ VAVK + + + E+ +M+D +H
Sbjct: 37 IGEGSTGIVCIA------TVRSSGKL---VAVKKMDLRKQQRR-ELLFNEVVIMRDY-QH 85
Query: 78 DHIVSFIGC-CYKDELRLVVEYC---ALGDLQSYLR--EE--------------YLSNNK 117
+++V DEL +V+E+ AL D+ ++ R EE L
Sbjct: 86 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 145
Query: 118 VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR--------WLAL 169
V+HRD+ + +ILL+ VK+SDFG + S+++P R W+A
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWMAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
E + Y + D+WS G+++ E+V G PY
Sbjct: 195 ELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 225
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL----SEDIYEQNVF--------QNGEP 158
E+L + ++HRDL NI + VVK+ DFGL +D EQ V G+
Sbjct: 132 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV 191
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
KL +++ E + N Y++K D++S G++L+E++
Sbjct: 192 GTKL---YMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 51/212 (24%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
+G+G G+V T +SG+ VAVK + + + E+ +M+D +H
Sbjct: 32 IGEGSTGIVCIA------TVRSSGKL---VAVKKMDLRKQQRR-ELLFNEVVIMRDY-QH 80
Query: 78 DHIVSFIGC-CYKDELRLVVEYC---ALGDLQSYLR--EE--------------YLSNNK 117
+++V DEL +V+E+ AL D+ ++ R EE L
Sbjct: 81 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 118 VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR--------WLAL 169
V+HRD+ + +ILL+ VK+SDFG + S+++P R W+A
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWMAP 189
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
E + Y + D+WS G+++ E+V G PY
Sbjct: 190 ELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 220
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 51/212 (24%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
+G+G G+V T +SG+ VAVK + + + E+ +M+D +H
Sbjct: 28 IGEGSTGIVCIA------TVRSSGKL---VAVKKMDLRKQQRR-ELLFNEVVIMRDY-QH 76
Query: 78 DHIVSFIGC-CYKDELRLVVEYC---ALGDLQSYLR--EE--------------YLSNNK 117
+++V DEL +V+E+ AL D+ ++ R EE L
Sbjct: 77 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 118 VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR--------WLAL 169
V+HRD+ + +ILL+ VK+SDFG + S+++P R W+A
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-----------SKEVPRRKXLVGTPYWMAP 185
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
E + Y + D+WS G+++ E+V G PY
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 216
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 34 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 85 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--PI 164
Y + +V+HRD+ N+LL S +KI+DFG S V + L +
Sbjct: 144 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTL 196
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 232
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY GD+ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ +K++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 55/221 (24%)
Query: 16 EVLGQGEFGVVV-KGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
+VLG G G +V +G+ + +VAVK + + +E+ L+++
Sbjct: 30 DVLGHGAEGTIVYRGMFDN-----------RDVAVKRILPEC----FSFADREVQLLRES 74
Query: 75 GKHDHIVSFIGCCYKDEL--RLVVEYCALGDLQSYLREE--------------------- 111
+H +++ + C KD + +E CA LQ Y+ ++
Sbjct: 75 DEHPNVIRYF-CTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLA 132
Query: 112 YLSNNKVVHRDLATRNILLSSPHV-----VKISDFGLSEDI-YEQNVF--QNGEPSEKLP 163
+L + +VHRDL NIL+S P+ ISDFGL + + ++ F ++G P +
Sbjct: 133 HLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE-- 190
Query: 164 IRWLALESLVSNIYTNKS---DVWSFGVVLWEIVTLGANPY 201
W+A E L + N + D++S G V + +++ G++P+
Sbjct: 191 -GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY GD+ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ +K++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 43/216 (19%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G+F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGQFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE-------------------- 111
++ +H ++++ K ++ L+ E A G+L +L E+
Sbjct: 70 EI-QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 112 YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPIR 165
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE------ 182
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 98/234 (41%), Gaps = 45/234 (19%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK--FLKEINLMKDV 74
VLG+G FG V+ L D T E AVK++ + DK L+E+ L+K +
Sbjct: 33 VLGKGSFGEVI--LCKDKIT-------GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 75 GKHDHIVSF------------IGCCYK-----DELRLVVEYCALGDLQSYLRE-----EY 112
H +I +G Y DE+ + + D +R+ Y
Sbjct: 84 D-HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITY 141
Query: 113 LSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
NK+VHRDL N+LL S ++I DFGLS + + + +K+ +
Sbjct: 142 XHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-----THFEASKKXKDKIGTAYYIA 196
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG-YRMERP 222
++ Y K DVWS GV+L+ I+ G P+ I+ + G Y E P
Sbjct: 197 PEVLHGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTFELP 249
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 62 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--PI 164
Y + +V+HRD+ N+LL S +KI+DFG S V + L +
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTL 173
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 209
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 104 LQSYLRE-EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL 162
++ +LR ++L N +VHRDL NIL++S VK++DFGL+ IY +Q +
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR-IYS---YQMALAPVVV 173
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEI 193
+ + A E L+ + Y D+WS G + E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 47/222 (21%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLK 66
PE G++LG+G F VV E A+ + E A+K+L+ K +
Sbjct: 9 PEDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTR 59
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------- 110
E ++M + H V DE L + Y G+L Y+R+
Sbjct: 60 ERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 118
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ------NVFQNGEPS 159
EYL ++HRDL NILL+ ++I+DFG ++ + + N F
Sbjct: 119 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT--- 175
Query: 160 EKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++++ E L SD+W+ G +++++V G P+
Sbjct: 176 ----AQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 34 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 85 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 144 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTTLC 193
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 232
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 9 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 60 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--PI 164
Y + +V+HRD+ N+LL S +KI+DFG S V + L +
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTLCGTL 171
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 207
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 104 LQSYLRE-EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL 162
++ +LR ++L N +VHRDL NIL++S VK++DFGL+ IY +Q +
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR-IYS---YQMALTPVVV 181
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEI 193
+ + A E L+ + Y D+WS G + E+
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLK 66
PE G++LG+G F VV E A+ + E A+K+L+ K +
Sbjct: 8 PEDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTR 58
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------- 110
E ++M + H V DE L + Y G+L Y+R+
Sbjct: 59 ERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 117
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q +
Sbjct: 118 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQ 176
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+++ E L SD+W+ G +++++V G P+
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 211
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 42/227 (18%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLK-ANADAKTYDKFLKEINLMKDV 74
E +G+G +GVV K G T A+K ++ D ++EI+++K++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGET----------FALKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------CALGDLQSYLREEYL---------- 113
KH +IV + K L LV E+ G L+S + +L
Sbjct: 58 -KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV 173
+ +V+HRDL +N+L++ +KI+DFGL+ + E + + + A + L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVVTLWYRAPDVLM 173
Query: 174 -SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP----LCRIVHYLST 215
S Y+ D+WS G + E+V GA +P + L RI L T
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVN-GAPLFPGVSEADQLMRIFRILGT 219
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 59 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTELC 167
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 206
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 45/217 (20%)
Query: 15 GEVLGQGEFGVVVKGLLGDGPTEGASG--QAAMEVAVKMLKANADAKTYDKFLKEINLMK 72
GE LG G F VV K E ++G AA + + K++ + + +E++++K
Sbjct: 16 GEELGSGVFAVVKKC------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 73 DVGKHDHIVSFIGCCY--KDELRLVVEYCALGDLQSYLREE------------------- 111
++ +H ++++ + Y K ++ L++E A G+L +L E+
Sbjct: 70 EI-QHPNVIT-LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 112 -YLSNNKVVHRDLATRNILLSSPHV----VKISDFGLSEDIYEQNVFQN--GEPSEKLPI 164
YL + ++ H DL NI+L +V +KI DFGL+ I N F+N G P
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE----- 182
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 183 -FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 217
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLK 66
PE G++LG+G F VV E A+ + E A+K+L+ K +
Sbjct: 6 PEDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTR 56
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------- 110
E ++M + H V DE L + Y G+L Y+R+
Sbjct: 57 ERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 115
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q +
Sbjct: 116 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQ 174
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+++ E L SD+W+ G +++++V G P+
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 12 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 62
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 63 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 121
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTTLC 171
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 59 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTTLC 167
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 62 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLP--- 163
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRAALC 170
Query: 164 --IRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 209
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLK 66
PE G++LG+G F VV E A+ + E A+K+L+ K +
Sbjct: 7 PEDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTR 57
Query: 67 EINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------- 110
E ++M + H V DE L + Y G+L Y+R+
Sbjct: 58 ERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 116
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q +
Sbjct: 117 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQ 175
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+++ E L SD+W+ G +++++V G P+
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 210
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 37/204 (18%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
+G+G +G+V + VA+K + + L+EI ++ +H
Sbjct: 51 IGEGAYGMVCSAY---------DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RH 100
Query: 78 DHIV---SFIGCCYKDELRLV--VEYCALGDLQSYLREEYLSNN---------------- 116
++I+ I ++++ V V + DL L+ ++LSN+
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYI 160
Query: 117 ---KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV 173
V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW ++
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 174 SNI--YTNKSDVWSFGVVLWEIVT 195
N YT D+WS G +L E+++
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 104 LQSYLRE-EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL 162
++ +LR ++L N +VHRDL NIL++S VK++DFGL+ IY +Q +
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR-IYS---YQMALDPVVV 173
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEI 193
+ + A E L+ + Y D+WS G + E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 64 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTTLC 172
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 211
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 62 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTTLC 170
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 49/206 (23%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG G GVV K + P+ + +A K++ ++ ++E+ ++ +
Sbjct: 33 LGAGNGGVVFK--VSHKPS-------GLVMARKLIHLEIKPAIRNQIIRELQVLHECNS- 82
Query: 78 DHIVSFIGCCYKD-ELRLVVEYCALGDLQ-------------------------SYLREE 111
+IV F G Y D E+ + +E+ G L +YLRE+
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ--NVFQNGEPSEKLPIRWLAL 169
+ K++HRD+ NIL++S +K+ DFG+S + + N F +++
Sbjct: 143 H----KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-------YMSP 191
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVT 195
E L Y+ +SD+WS G+ L E+
Sbjct: 192 ERLQGTHYSVQSDIWSMGLSLVEMAV 217
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 9 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 60 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTDLC 168
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 207
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 59 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTDLC 167
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 25 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 75
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 76 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 134
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 135 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTTLC 184
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 223
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 36/187 (19%)
Query: 45 MEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALG 102
ME AVK++ + T +EI ++ G+H +I++ + Y D + +V E G
Sbjct: 48 MEFAVKIIDKSKRDPT-----EEIEILLRYGQHPNIIT-LKDVYDDGKYVYVVTELMKGG 101
Query: 103 DL------QSYLRE--------------EYLSNNKVVHRDLATRNILL----SSPHVVKI 138
+L Q + E EYL VVHRDL NIL +P ++I
Sbjct: 102 ELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRI 161
Query: 139 SDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGA 198
DFG ++ + +N + ++A E L Y D+WS GV+L+ ++T G
Sbjct: 162 CDFGFAKQLRAENGLLM---TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT-GY 217
Query: 199 NPYPHIP 205
P+ + P
Sbjct: 218 TPFANGP 224
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
+ N ++HRD+ NI++S+ + VK+ DFG++ I + + ++L+ E
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +SDV+S G VL+E++T G P+
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLT-GEPPF 236
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 112 YLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + +VHRDL N+LL S ++KI DFGLS + G+ E+L +
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS-----AHFEVGGKMKERLGTAYYI 190
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ Y K DVWS GV+L+ I+ G P+
Sbjct: 191 APEVLRKKYDEKCDVWSCGVILY-ILLCGYPPF 222
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 64 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTDLC 172
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 211
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 46/225 (20%)
Query: 1 MALSCGYPPERLILGE-----VLGQGEFGVVVKGLLGDGPTEGASGQA-AMEVAVKMLKA 54
M +S P R+ + E +LG+G FG V+ E A+G+ AM++ K +
Sbjct: 134 MEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIV 187
Query: 55 NADAKTYDKFLKEINLMKDVGKHDHIVSF-IGCCYKDELRLVVEYCALGDLQSYLREE-- 111
D + L E ++++ +H + + D L V+EY G+L +L E
Sbjct: 188 AKDEVAHT--LTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV 244
Query: 112 ------------------YLSNNK-VVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQN 151
YL + K VV+RDL N++L +KI+DFGL E I +
Sbjct: 245 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304
Query: 152 VFQN--GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
+ G P +LA E L N Y D W GVV++E++
Sbjct: 305 TMKTFCGTPE------YLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 59 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRXXLC 167
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 59 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTXLC 167
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 59 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTDLC 167
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 10 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 61 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 120 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRXXLC 169
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 208
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 243
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 244 ALGVLIYEMAA-GYPPF 259
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 37/204 (18%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
+G+G +G+V + VA+K + + L+EI ++ +H
Sbjct: 35 IGEGAYGMVCSAY---------DNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRF-RH 84
Query: 78 DHIV---SFIGCCYKDELR--LVVEYCALGDLQSYLREEYLSNN---------------- 116
++I+ I ++++ +V+ DL L+ ++LSN+
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 117 ---KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV 173
V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW ++
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 174 SNI--YTNKSDVWSFGVVLWEIVT 195
N YT D+WS G +L E+++
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 112 YLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLA 168
YL + +VHRDL N+LL S ++KI DFGLS + G+ E+L +
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS-----AHFEVGGKMKERLGTAYYI 173
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ Y K DVWS GV+L+ I+ G P+
Sbjct: 174 APEVLRKKYDEKCDVWSCGVILY-ILLCGYPPF 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 49/216 (22%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEINLMK 72
+G LG+G+FG V Q+ +A+K+L KA + + L+ ++
Sbjct: 15 IGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 73 DVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE----- 110
+H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 66 SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIR 165
Y + +V+HRD+ N+LL S +KI+DFG S PS + +
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTTLCGTLD 174
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
+ N ++HRD+ NIL+S+ + VK+ DFG++ I + + ++L+ E
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +SDV+S G VL+E++T G P+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLT-GEPPF 219
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 59 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLP--- 163
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRAALC 167
Query: 164 --IRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 206
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 198
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
+ N ++HRD+ NI++S+ + VK+ DFG++ I + + ++L+ E
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +SDV+S G VL+E++T G P+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLT-GEPPF 219
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+++ +K++DFGL++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
+ N ++HRD+ NI++S+ + VK+ DFG++ I + + ++L+ E
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +SDV+S G VL+E++T G P+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLT-GEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
+ N ++HRD+ NI++S+ + VK+ DFG++ I + + ++L+ E
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +SDV+S G VL+E++T G P+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLT-GEPPF 219
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 46/225 (20%)
Query: 1 MALSCGYPPERLILGE-----VLGQGEFGVVVKGLLGDGPTEGASGQA-AMEVAVKMLKA 54
M +S P R+ + E +LG+G FG V+ L+ E A+G+ AM++ K +
Sbjct: 137 MEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVI--LV----KEKATGRYYAMKILKKEVIV 190
Query: 55 NADAKTYDKFLKEINLMKDVGKHDHIVSF-IGCCYKDELRLVVEYCALGDLQSYLREE-- 111
D + L E ++++ +H + + D L V+EY G+L +L E
Sbjct: 191 AKDEVAHT--LTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV 247
Query: 112 ------------------YLSNNK-VVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQN 151
YL + K VV+RDL N++L +KI+DFGL E I +
Sbjct: 248 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 307
Query: 152 VFQN--GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
+ G P +LA E L N Y D W GVV++E++
Sbjct: 308 TMKTFCGTPE------YLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 7 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 57
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 58 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 116
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 117 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTTLC 166
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 205
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 58/221 (26%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAME-VAVKMLKANADAK-TYDKFLKEINLMKD 73
E +G+G +G V K A + E VA+K ++ + D + L+EI L+K+
Sbjct: 8 EKIGEGTYGTVFK----------AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE 57
Query: 74 VGKHDHIVSFIGCCYKDE-LRLVVEYCAL----------GDLQSYLREEYL--------- 113
+ KH +IV + D+ L LV E+C GDL + + +L
Sbjct: 58 L-KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 114 -SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+ V+HRDL +N+L++ +K+++FGL+ +P+R + E +
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF-------------GIPVRCYSAEVV 163
Query: 173 V-----------SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
+ +Y+ D+WS G + E+ G +P
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
+ N ++HRD+ NI++S+ + VK+ DFG++ I + + ++L+ E
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +SDV+S G VL+E++T G P+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLT-GEPPF 219
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 49/216 (22%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEINLMK 72
+G LG+G+FG V Q+ +A+K+L KA + + L+ ++
Sbjct: 15 IGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 73 DVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE----- 110
+H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 66 SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIR 165
Y + +V+HRD+ N+LL S +KI+DFG S PS + +
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRXXLCGTLD 174
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 209
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 200
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 196
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 58/221 (26%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAME-VAVKMLKANADAK-TYDKFLKEINLMKD 73
E +G+G +G V K A + E VA+K ++ + D + L+EI L+K+
Sbjct: 8 EKIGEGTYGTVFK----------AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE 57
Query: 74 VGKHDHIVSFIGCCYKDE-LRLVVEYCAL----------GDLQSYLREEYL--------- 113
+ KH +IV + D+ L LV E+C GDL + + +L
Sbjct: 58 L-KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 114 -SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
+ V+HRDL +N+L++ +K++DFGL+ +P+R + E +
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFGLARAF-------------GIPVRCYSAEVV 163
Query: 173 V-----------SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
+ +Y+ D+WS G + E+ +P
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFP 204
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 64 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTTLC 172
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + + K D+WS GV+ +E + +G P+
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFL-VGKPPF 211
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 196
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 163
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 164 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 217
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 218 ALGVLIYEMAA-GYPPF 233
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 57/225 (25%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
++ L E +G+G +G V +GL G S VAVK+ + + + +E
Sbjct: 8 RQVALVECVGKGRYGEVWRGLW-----HGES------VAVKIFSSRDE----QSWFRETE 52
Query: 70 LMKDVG-KHDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLREEYLSNN------- 116
+ V +HD+I+ FI +L L+ Y G L +L+ + L +
Sbjct: 53 IYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAV 112
Query: 117 --------------------KVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ--NVFQ 154
+ HRD +RN+L+ S I+D GL+ ++ Q +
Sbjct: 113 SAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAV-MHSQGSDYLD 171
Query: 155 NGEPSEKLPIRWLALESLVSNIYTN------KSDVWSFGVVLWEI 193
G R++A E L I T+ +D+W+FG+VLWEI
Sbjct: 172 IGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 196
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 56/234 (23%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P+ I+ ++G+G +G V L D TE A++ +M + D K + L+EI
Sbjct: 25 PDNYIIKHLIGRGSYGYVY--LAYDKNTEK---NVAIKKVNRMFEDLIDCK---RILREI 76
Query: 69 NLMKDVGKHDHIVSFIGCCYKD------ELRLVVEYCALGDLQSYLR------------- 109
++ + K D+I+ D EL +V+E A DL+ +
Sbjct: 77 TILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTI 134
Query: 110 -------EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ-------NVFQN 155
E ++ + ++HRDL N LL+ VK+ DFGL+ I + ++ +N
Sbjct: 135 LYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN 194
Query: 156 GEP-----------SEKLPIRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTL 196
EP + + RW L+ YT D+WS G + E++ +
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 9 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 60 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----------CHAPSSRRTTLS 168
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 33 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 83
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 84 RDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q S ++
Sbjct: 143 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANSFVGTAQY 201
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 235
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 155
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 156 PENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 209
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 210 ALGVLIYEMAA-GYPPF 225
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+++ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIIISKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 104 LQSYLRE-EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL 162
++ +LR ++L N +VHRDL NIL++S VK++DFGL+ IY +Q +
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR-IYS---YQMALFPVVV 173
Query: 163 PIRWLALESLVSNIYTNKSDVWSFGVVLWEI 193
+ + A E L+ + Y D+WS G + E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 42/211 (19%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK--FLKEINLMKDV 74
VLG+G FG V+ G + AVK+LK + + D + E ++
Sbjct: 27 VLGKGSFGKVM--------LSERKGTDEL-YAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 75 GKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLREE--------------------YL 113
GK + C D L V+EY GDL ++++ +L
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWLALE 170
+ +++RDL N++L S +KI+DFG+ E+I++ + G P ++A E
Sbjct: 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD------YIAPE 191
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ Y D W+FGV+L+E++ G P+
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLA-GQAPF 221
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 49/216 (22%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEINLMK 72
+G LG+G+FG V Q +A+K+L KA + + L+ ++
Sbjct: 9 IGRPLGKGKFGNVYLA---------REKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQ 59
Query: 73 DVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE----- 110
+H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 60 SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 118
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIR 165
Y + +V+HRD+ N+LL S +KI+DFG S PS + +
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTTLCGTLD 168
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 203
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ +K++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 42/211 (19%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK--FLKEINLMKDV 74
VLG+G FG V+ G + AVK+LK + + D + E ++
Sbjct: 348 VLGKGSFGKVM--------LSERKGTDEL-YAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 75 GKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLREE--------------------YL 113
GK + C D L V+EY GDL ++++ +L
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWLALE 170
+ +++RDL N++L S +KI+DFG+ E+I++ + G P ++A E
Sbjct: 459 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD------YIAPE 512
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ Y D W+FGV+L+E++ G P+
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLA-GQAPF 542
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 200
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 45 MEVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCAL 101
ME AVK++ K+ D +EI ++ G+H +I++ + Y D + LV E
Sbjct: 53 MEYAVKVIDKSKRDPS------EEIEILLRYGQHPNIIT-LKDVYDDGKHVYLVTELMRG 105
Query: 102 GDL------QSYLRE--------------EYLSNNKVVHRDLATRNILL----SSPHVVK 137
G+L Q + E EYL + VVHRDL NIL +P ++
Sbjct: 106 GELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLR 165
Query: 138 ISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
I DFG ++ + +N + ++A E L Y D+WS G++L+ ++ G
Sbjct: 166 ICDFGFAKQLRAENGLLM---TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA-G 221
Query: 198 ANPYPHIP 205
P+ + P
Sbjct: 222 YTPFANGP 229
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 29 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 79
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 80 RDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q S ++
Sbjct: 139 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANSFVGTAQY 197
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 231
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 38/216 (17%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L EV+G+G F VV + + +GQ V + K + + LK +
Sbjct: 28 LCEVIGKGAFSVVRRCI------NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 74 VGKHDHIVSFIGCCYKD-ELRLVVEYCALGDL-------------------QSYLRE--- 110
+ KH HIV + D L +V E+ DL Y+R+
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 111 --EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y +N ++HRD+ N+LL+S VK+ DFG++ + E + G
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP---H 198
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + Y DVW GV+L+ I+ G P+
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILF-ILLSGCLPF 233
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 216
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL----SEDIYEQNVF--------QNGEP 158
E+L + ++HRDL NI + VVK+ DFGL +D EQ V G+
Sbjct: 178 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV 237
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
KL +++ E + N Y++K D++S G++L+E++
Sbjct: 238 GTKL---YMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 45 MEVAVKML-KANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKD--ELRLVVEYCAL 101
ME AVK++ K+ D +EI ++ G+H +I++ + Y D + LV E
Sbjct: 53 MEYAVKVIDKSKRDPS------EEIEILLRYGQHPNIIT-LKDVYDDGKHVYLVTELMRG 105
Query: 102 GDL------QSYLRE--------------EYLSNNKVVHRDLATRNILL----SSPHVVK 137
G+L Q + E EYL + VVHRDL NIL +P ++
Sbjct: 106 GELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLR 165
Query: 138 ISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
I DFG ++ + +N + ++A E L Y D+WS G++L+ ++ G
Sbjct: 166 ICDFGFAKQLRAENGLLM---TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA-G 221
Query: 198 ANPYPHIP 205
P+ + P
Sbjct: 222 YTPFANGP 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 136 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 194
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 198
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 198
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 136 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 194
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 61/227 (26%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
++ L E +G+G +G V +G S Q VAVK+ + D K++ +E
Sbjct: 37 RQITLLECVGKGRYGEVWRG----------SWQGE-NVAVKIFSSR-DEKSW---FRETE 81
Query: 70 LMKDVG-KHDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLR-------------- 109
L V +H++I+ FI +L L+ Y +G L YL+
Sbjct: 82 LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL 141
Query: 110 -----------EEYLSNNK--VVHRDLATRNILLSSPHVVKISDFGL----SEDIYEQNV 152
E + + K + HRDL ++NIL+ I+D GL S+ + +V
Sbjct: 142 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 201
Query: 153 FQNGEPSEKLPIRWLALESLVSNIYTN------KSDVWSFGVVLWEI 193
N K R++A E L I + + D+W+FG+VLWE+
Sbjct: 202 GNNPRVGTK---RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 196
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + G P +LA E ++S Y D W
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE------YLAPEIILSKGYNKAVDWW 243
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 244 ALGVLIYEMAA-GYPPF 259
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 146 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 204
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 196
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 200
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 143 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 201
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 144 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 202
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 135 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 193
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G +E + RW
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAP 200
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ +K++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V + +A+K+L KA + + L+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA---------REKNSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 59 VEIQSHLRHPNILRLYGY-FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLP--- 163
Y + KV+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 118 ANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRAALC 167
Query: 164 --IRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 206
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+++ +K++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+++ +K++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+++ +K++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+++ +K++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+++ +K++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 42/227 (18%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLK-ANADAKTYDKFLKEINLMKDV 74
E +G+G +GVV K G T A+K ++ D ++EI+++K++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGET----------FALKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------CALGDLQSYLREEYL---------- 113
KH +IV + K L LV E+ G L+S + +L
Sbjct: 58 -KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV 173
+ +V+HRDL +N+L++ +KI+DFGL+ + E + + + A + L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVVTLWYRAPDVLM 173
Query: 174 -SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP----LCRIVHYLST 215
S Y+ D+WS G + E+V G +P + L RI L T
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRIFRILGT 219
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+++ +K++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 61/226 (26%)
Query: 11 RLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINL 70
++ L E +G+G +G V +G S Q VAVK+ ++ D K++ +E L
Sbjct: 9 QITLLECVGKGRYGEVWRG----------SWQGE-NVAVKIF-SSRDEKSW---FRETEL 53
Query: 71 MKDVG-KHDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLR--------------- 109
V +H++I+ FI +L L+ Y +G L YL+
Sbjct: 54 YNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLS 113
Query: 110 ----------EEYLSNNK--VVHRDLATRNILLSSPHVVKISDFGL----SEDIYEQNVF 153
E + + K + HRDL ++NIL+ I+D GL S+ + +V
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
Query: 154 QNGEPSEKLPIRWLALESLVSNIYTN------KSDVWSFGVVLWEI 193
N K R++A E L I + + D+W+FG+VLWE+
Sbjct: 174 NNPRVGTK---RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 44/213 (20%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDV 74
E LG+G F VV + + +E A K++ A+ + K +E + + +
Sbjct: 35 EELGKGAFSVVRRCV---------HKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 85
Query: 75 GKHDHIVSFIGCCYKDELRLVV----------------EYCALGDLQSYLRE-----EYL 113
+H +IV ++ +V E+ + D +++ Y
Sbjct: 86 -QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 114 SNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRWLA 168
+N +VHR+L N+LL+S VK++DFGL+ ++ + + G P +L+
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG------YLS 198
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
E L + Y+ D+W+ GV+L+ I+ +G P+
Sbjct: 199 PEVLKKDPYSKPVDIWACGVILY-ILLVGYPPF 230
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 42/227 (18%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLK-ANADAKTYDKFLKEINLMKDV 74
E +G+G +GVV K G T A+K ++ D ++EI+++K++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGET----------FALKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 75 GKHDHIVSFIGCCY-KDELRLVVEY----------CALGDLQSYLREEYL---------- 113
KH +IV + K L LV E+ G L+S + +L
Sbjct: 58 -KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV 173
+ +V+HRDL +N+L++ +KI+DFGL+ + E + + + A + L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEIVTLWYRAPDVLM 173
Query: 174 -SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP----LCRIVHYLST 215
S Y+ D+WS G + E+V G +P + L RI L T
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRIFRILGT 219
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+L+++ +KI DFGL+ I + G +E + RW
Sbjct: 158 KYIHSANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEXVATRWYRAP 216
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 44/215 (20%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMK 72
+ E LG+G F VV + + +E A K++ A+ + K +E + +
Sbjct: 9 VKEELGKGAFSVVRRCV---------HKTTGLEFAAKIINTKKLSARDFQKLEREARICR 59
Query: 73 DVGKHDHIVSFIGCCYKDELRLVV----------------EYCALGDLQSYLRE-----E 111
+ +H +IV ++ +V E+ + D +++
Sbjct: 60 KL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 118
Query: 112 YLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRW 166
Y +N +VHR+L N+LL+S VK++DFGL+ ++ + + G P +
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG------Y 172
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
L+ E L + Y+ D+W+ GV+L+ I+ +G P+
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILY-ILLVGYPPF 206
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G E + RW
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXVATRWYRAP 200
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + V+HRDL N+LL++ +KI DFGL+ + + + G E + RW
Sbjct: 143 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXVATRWYRAP 201
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G +L E+++
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+++ ++++DFGL++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 82
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G L Y+R+
Sbjct: 83 RDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI 141
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q S ++
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANSFVGTAQY 200
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L + SD+W+ G +++++V G P+
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA------LAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 44/213 (20%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDV 74
E LG+G F VV + + +E A K++ A+ + K +E + + +
Sbjct: 12 EELGKGAFSVVRRCV---------HKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 75 GKHDHIVSFIGCCYKDELRLVV----------------EYCALGDLQSYLRE-----EYL 113
+H +IV ++ +V E+ + D +++ Y
Sbjct: 63 -QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 114 SNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRWLA 168
+N +VHR+L N+LL+S VK++DFGL+ ++ + + G P +L+
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG------YLS 175
Query: 169 LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
E L + Y+ D+W+ GV+L+ I+ +G P+
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILY-ILLVGYPPF 207
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 48/213 (22%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD-KFLKEINLMKDVGK 76
+GQG FG V K +GQ +VA+K + + + + L+EI +++ + K
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQ---KVALKKVLMENEKEGFPITALREIKILQ-LLK 75
Query: 77 HDHIVSFIGCCY---------KDELRLVVEYC---------------ALGDLQSYLRE-- 110
H+++V+ I C K + LV ++C L +++ ++
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSE---KLPI 164
Y+ NK++HRD+ N+L++ V+K++DFGL+ ++ +N +P+ ++
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF---SLAKNSQPNRYXNRVVT 192
Query: 165 RWLALESLV--SNIYTNKSDVWSFGVVLWEIVT 195
W L+ Y D+W G ++ E+ T
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 44/215 (20%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMK 72
+ E LG+G F VV + + +E A K++ A+ + K +E + +
Sbjct: 10 VKEELGKGAFSVVRRCV---------HKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 73 DVGKHDHIVSFIGCCYKDELRLVV----------------EYCALGDLQSYLRE-----E 111
+ +H +IV ++ +V E+ + D +++
Sbjct: 61 KL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 112 YLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRW 166
Y +N +VHR+L N+LL+S VK++DFGL+ ++ + + G P +
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG------Y 173
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
L+ E L + Y+ D+W+ GV+L+ I+ +G P+
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILY-ILLVGYPPF 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++++ G P+
Sbjct: 223 ALGVLIYQMAA-GYPPF 238
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 48/213 (22%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD-KFLKEINLMKDVGK 76
+GQG FG V K +GQ +VA+K + + + + L+EI +++ + K
Sbjct: 25 IGQGTFGEVFKA------RHRKTGQ---KVALKKVLMENEKEGFPITALREIKILQ-LLK 74
Query: 77 HDHIVSFIGCCY---------KDELRLVVEYC---------------ALGDLQSYLRE-- 110
H+++V+ I C K + LV ++C L +++ ++
Sbjct: 75 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSE---KLPI 164
Y+ NK++HRD+ N+L++ V+K++DFGL+ ++ +N +P+ ++
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF---SLAKNSQPNRYXNRVVT 191
Query: 165 RWLALESLV--SNIYTNKSDVWSFGVVLWEIVT 195
W L+ Y D+W G ++ E+ T
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 45/218 (20%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKE 67
E +G LG+G+FG V Q+ +A+K+L A + +E
Sbjct: 12 EDFDIGRPLGKGKFGNVYLA---------RERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE 110
+ + + +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 63 VEIQSHL-RHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--P 163
Y + +V+HRD+ N+LL S +KI+DFG S V + L
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGT 173
Query: 164 IRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGMPPF 210
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 51/221 (23%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTY-----DKFLKEI 68
+GE LG G+F +V K E ++G +E A K +K + ++ +E+
Sbjct: 16 IGEELGSGQFAIVKKC------REKSTG---LEYAAKFIKKRQSRASRRGVCREEIEREV 66
Query: 69 NLMKDVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE---------------- 111
++++ V H +I++ + ++ L++E + G+L +L ++
Sbjct: 67 SILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 112 ----YLSNNKVVHRDLATRNILLSS-----PHVVKISDFGLSEDIYEQNVFQN--GEPSE 160
YL K+ H DL NI+L PH +K+ DFGL+ +I + F+N G P
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPE- 183
Query: 161 KLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + ++D+WS GV+ + I+ GA+P+
Sbjct: 184 -----FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPF 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 50/221 (22%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
I LG G FG V E +SG +E +K + + ++ EI ++
Sbjct: 24 FIFKRKLGSGAFGDV------HLVEERSSG---LERVIKTINKDRSQVPMEQIEAEIEVL 74
Query: 72 KDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDL---------------QSYLRE---- 110
K + H +I+ I ++D + +V+E C G+L + Y+ E
Sbjct: 75 KSLD-HPNIIK-IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132
Query: 111 -----EYLSNNKVVHRDLATRNILL--SSPHV-VKISDFGLSEDIYEQNVFQNGEPSEKL 162
Y + VVH+DL NIL +SPH +KI DFGL+E +F++ E S
Sbjct: 133 MMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE------LFKSDEHSTNA 186
Query: 163 P--IRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E ++ T K D+WS GVV++ ++T G P+
Sbjct: 187 AGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLT-GCLPF 225
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 61/225 (27%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ L E +G+G +G V +G S Q VAVK+ ++ D K++ +E L
Sbjct: 10 ITLLECVGKGRYGEVWRG----------SWQGE-NVAVKIF-SSRDEKSW---FRETELY 54
Query: 72 KDVG-KHDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLR---------------- 109
V +H++I+ FI +L L+ Y +G L YL+
Sbjct: 55 NTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSI 114
Query: 110 ---------EEYLSNNK--VVHRDLATRNILLSSPHVVKISDFGL----SEDIYEQNVFQ 154
E + + K + HRDL ++NIL+ I+D GL S+ + +V
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174
Query: 155 NGEPSEKLPIRWLALESLVSNIYTN------KSDVWSFGVVLWEI 193
N K R++A E L I + + D+W+FG+VLWE+
Sbjct: 175 NPRVGTK---RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 10 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 61 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI++FG S PS +
Sbjct: 120 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHA----------PSSRRTTLC 169
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 208
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 48/213 (22%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVK-MLKANADAKTYDKFLKEINLMKDVGK 76
+GQG FG V K +GQ +VA+K +L N L+EI +++ + K
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQ---KVALKKVLMENEKEGFPITALREIKILQ-LLK 75
Query: 77 HDHIVSFIGCCY---------KDELRLVVEYC---------------ALGDLQSYLRE-- 110
H+++V+ I C K + LV ++C L +++ ++
Sbjct: 76 HENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSE---KLPI 164
Y+ NK++HRD+ N+L++ V+K++DFGL+ ++ +N +P+ ++
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF---SLAKNSQPNRYXNRVVT 192
Query: 165 RWLALESLV--SNIYTNKSDVWSFGVVLWEIVT 195
W L+ Y D+W G ++ E+ T
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 80
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 81 RDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q + ++
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANAFVGTAQY 198
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 48/213 (22%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD-KFLKEINLMKDVGK 76
+GQG FG V K +GQ +VA+K + + + + L+EI +++ + K
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQ---KVALKKVLMENEKEGFPITALREIKILQ-LLK 75
Query: 77 HDHIVSFIGCCY---------KDELRLVVEYC---------------ALGDLQSYLRE-- 110
H+++V+ I C K + LV ++C L +++ ++
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSE---KLPI 164
Y+ NK++HRD+ N+L++ V+K++DFGL+ ++ +N +P+ ++
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF---SLAKNSQPNRYXNRVVT 192
Query: 165 RWLALESLV--SNIYTNKSDVWSFGVVLWEIVT 195
W L+ Y D+W G ++ E+ T
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLRE---------------- 110
++ +H +I+ G + D R L++EY G++ L++
Sbjct: 64 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRTTLC 172
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 211
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE- 110
++ +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 62 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI++FG S PS +
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHA----------PSSRRTTLC 170
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 209
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 243
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 244 ALGVLIYEMAA-GYPPF 259
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 112 YLSNNKVVHRDLATRNILLSSPHV--VKISDFGLSEDIYEQNVFQNGE----PSEKLPIR 165
YL N + HRD+ N L S+ +K+ DFGLS++ Y+ N NGE ++
Sbjct: 183 YLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLN---NGEYYGMTTKAGTPY 239
Query: 166 WLALESL--VSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI 204
++A E L + Y K D WS GV+L ++ +GA P+P +
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLL-HLLLMGAVPFPGV 279
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 49/220 (22%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLKEI 68
E +G LG+G+FG V Q+ +A+K+L KA + + L+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 69 NLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLRE---------------- 110
++ +H +I+ G + D R L++EY G++ L++
Sbjct: 64 VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL---- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----------PSSRRXXLX 172
Query: 163 -PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPF 211
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 51/221 (23%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKE 67
E +G LG+G+FG V Q+ +A+K+L A + +E
Sbjct: 12 EDFDIGRPLGKGKFGNVYLA---------RERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELR--LVVEYCALG----DLQ-----------SYLRE 110
+ + + +H +I+ G + D R L++EY LG +LQ +Y+ E
Sbjct: 63 VEIQSHL-RHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 111 -----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL--- 162
Y + +V+HRD+ N+LL S +KI+DFG S PS +
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHA----------PSSRRTTL 170
Query: 163 --PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ +L E + ++ K D+WS GV+ +E + +G P+
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGMPPF 210
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 27/180 (15%)
Query: 45 MEVAVK--MLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCAL 101
++VA+K + +T +F +E++ + H +IVS I +D+ LV+EY
Sbjct: 37 IKVAIKAIFIPPREKEETLKRFEREVHNSSQLS-HQNIVSMIDVDEEDDCYYLVMEYIEG 95
Query: 102 GDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF 141
L Y+ ++ + ++VHRD+ +NIL+ S +KI DF
Sbjct: 96 PTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDF 155
Query: 142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
G+++ + E ++ Q +++ + E +D++S G+VL+E++ +G P+
Sbjct: 156 GIAKALSETSLTQTNHVLG--TVQYFSPEQAKGEATDECTDIYSIGIVLYEML-VGEPPF 212
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 82
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 83 RDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 200
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWL 167
EYL + VV+RD+ N++L +KI+DFGL E I + + G P +L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE------YL 172
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIV 194
A E L N Y D W GVV++E++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 35 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 85
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 86 RDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 144
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 145 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 203
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 33 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 83
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 84 RDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 143 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 201
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 235
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 82
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 83 RDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 200
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 82
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 83 RDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 200
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWL 167
EYL + VV+RD+ N++L +KI+DFGL E I + + G P +L
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE------YL 175
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIV 194
A E L N Y D W GVV++E++
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMM 202
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWL 167
EYL + VV+RD+ N++L +KI+DFGL E I + + G P +L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE------YL 172
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIV 194
A E L N Y D W GVV++E++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 82
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 83 RDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 200
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 13/97 (13%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKLPIRWL 167
EYL K++HRD+ N+L+ +KI+DFG+S + + + G P+ ++
Sbjct: 151 EYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPA------FM 204
Query: 168 ALESL--VSNIYTNKS-DVWSFGVVLWEIVTLGANPY 201
A ESL I++ K+ DVW+ GV L+ V G P+
Sbjct: 205 APESLSETRKIFSGKALDVWAMGVTLYCFV-FGQCPF 240
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 80
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 81 RDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 198
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 82
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 83 RDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 200
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 161
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 162 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 215
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 216 ALGVLIYEMAA-GYPPF 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 80
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 81 RDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 198
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 161
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 162 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 215
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 216 ALGVLIYEMAA-GYPPF 231
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 154
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 155 PENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE------YLAPEIILSKGYNKAVDWW 208
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 209 ALGVLIYEMAA-GYPPF 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE------YLAPEIILSKGYNKAVDWW 223
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 224 ALGVLIYEMAA-GYPPF 239
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 14 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 64
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 65 RDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 123
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 124 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 182
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+++ ++++DFG ++ + + G P +LA E ++S Y D W
Sbjct: 169 PENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPEIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 87 CYKDE--LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLA 124
+KD L +V+EY A G++ S+LR EYL + +++RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVW 184
N+L+ ++++DFG ++ + + G P +LA ++S Y D W
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE------YLAPAIILSKGYNKAVDWW 222
Query: 185 SFGVVLWEIVTLGANPY 201
+ GV+++E+ G P+
Sbjct: 223 ALGVLIYEMAA-GYPPF 238
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQN---GEPSEKLPI 164
+YL N +VHRDL N+L +P + I+DFGLS+ EQN + G P
Sbjct: 120 KYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK--MEQNGIMSTACGTPG----- 172
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG-YRMERP 222
++A E L Y+ D WS GV+ + I+ G P+ ++ + G Y E P
Sbjct: 173 -YVAPEVLAQKPYSKAVDCWSIGVITY-ILLCGYPPFYEETESKLFEKIKEGYYEFESP 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F VV E A+ + E A+K+L+ K +E
Sbjct: 29 EDFKFGKILGEGSFSTVVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 79
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 80 RDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 139 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 197
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 231
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWL 167
EYL + VV+RD+ N++L +KI+DFGL E I + + G P +L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE------YL 172
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIV 194
A E L N Y D W GVV++E++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWL 167
EYL + VV+RD+ N++L +KI+DFGL E I + + G P +L
Sbjct: 124 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE------YL 177
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIV 194
A E L N Y D W GVV++E++
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMM 204
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK--FLKEINLMKDV 74
VLG+G FG V +L D G + A+K+LK + + D + E ++ +
Sbjct: 26 VLGKGSFGKV---MLAD-----RKGTEEL-YAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 75 GKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLREE--------------------YL 113
K + C D L V+EY GDL ++++ +L
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFL 136
Query: 114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKLPIRWLALE 170
+++RDL N++L S +KI+DFG+ ++ V G P ++A E
Sbjct: 137 HKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPD------YIAPE 190
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ Y D W++GV+L+E++ G P+
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLA-GQPPF 220
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 36/186 (19%)
Query: 46 EVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGD 103
E AVK++ + T +EI ++ G+H +I++ + Y D + +V E G+
Sbjct: 49 EFAVKIIDKSKRDPT-----EEIEILLRYGQHPNIIT-LKDVYDDGKYVYVVTELXKGGE 102
Query: 104 L------QSYLRE--------------EYLSNNKVVHRDLATRNILL----SSPHVVKIS 139
L Q + E EYL VVHRDL NIL +P ++I
Sbjct: 103 LLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRIC 162
Query: 140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGAN 199
DFG ++ + +N + ++A E L Y D+WS GV+L+ +T G
Sbjct: 163 DFGFAKQLRAENGLLX---TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLT-GYT 218
Query: 200 PYPHIP 205
P+ + P
Sbjct: 219 PFANGP 224
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWL 167
EYL + VV+RD+ N++L +KI+DFGL E I + + G P +L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE------YL 172
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIV 194
A E L N Y D W GVV++E++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWL 167
EYL + VV+RD+ N++L +KI+DFGL E I + + G P +L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE------YL 172
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIV 194
A E L N Y D W GVV++E++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 112 YLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRW 166
YL N +VHRDL N+L ++P +KI+DFGLS+ + Q + + G P +
Sbjct: 163 YLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPG------Y 216
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y + D+WS G++ + I+ G P+
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITY-ILLCGFEPF 250
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 50/216 (23%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKT-YDKFLKEINL 70
++ + LG+G+F VV + + S E A K LK + + L EI +
Sbjct: 31 ILTSKELGRGKFAVVRQCI---------SKSTGQEYAAKFLKKRRRGQDCRAEILHEIAV 81
Query: 71 MKDVGKHDHIVSFIGCCYKD--ELRLVVEYCALGDLQSYLREE----------------- 111
++ +++ + Y++ E+ L++EY A G++ S E
Sbjct: 82 LELAKSCPRVIN-LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQI 140
Query: 112 -----YLSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDIYEQNVFQNGEPSEKLP 163
YL N +VH DL +NILLSS + +KI DFG+S I G E
Sbjct: 141 LEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--------GHACELRE 192
Query: 164 I----RWLALESLVSNIYTNKSDVWSFGVVLWEIVT 195
I +LA E L + T +D+W+ G++ + ++T
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH-VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+Y+ + V+HRDL N+ +++ V+KI DFGL+ I + + G SE L +W
Sbjct: 134 KYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR-IMDPHYSHKGHLSEGLVTKWYRS 192
Query: 170 ESLV--SNIYTNKSDVWSFGVVLWEIVT 195
L+ N YT D+W+ G + E++T
Sbjct: 193 PRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 42/171 (24%)
Query: 65 LKEINLMKDVGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREEYLSNNK------ 117
LKE+++++ V H +I+ + LV + G+L YL E+ + K
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 118 --------------VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL- 162
+VHRDL NILL +K++DFG S + +P EKL
Sbjct: 118 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---------DPGEKLR 168
Query: 163 ----PIRWLALESLVSNI------YTNKSDVWSFGVVLWEIVTLGANPYPH 203
+LA E + ++ Y + D+WS GV+++ ++ G+ P+ H
Sbjct: 169 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWH 218
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 42/171 (24%)
Query: 65 LKEINLMKDVGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREEYLSNNK------ 117
LKE+++++ V H +I+ + LV + G+L YL E+ + K
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 118 --------------VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL- 162
+VHRDL NILL +K++DFG S + +P EKL
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---------DPGEKLR 181
Query: 163 ----PIRWLALESLVSNI------YTNKSDVWSFGVVLWEIVTLGANPYPH 203
+LA E + ++ Y + D+WS GV+++ ++ G+ P+ H
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWH 231
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 42/171 (24%)
Query: 65 LKEINLMKDVGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREEYLSNNK------ 117
LKE+++++ V H +I+ + LV + G+L YL E+ + K
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 118 --------------VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL- 162
+VHRDL NILL +K++DFG S + +P EKL
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---------DPGEKLR 181
Query: 163 ----PIRWLALESLVSNI------YTNKSDVWSFGVVLWEIVTLGANPYPH 203
+LA E + ++ Y + D+WS GV+++ ++ G+ P+ H
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWH 231
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 11 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEIXINKM 61
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 62 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
L + HRD+ N+LL +KISDFGL+ ++ N + + ++A E L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 173 VSN-IYTNKSDVWSFGVVL 190
+ DVWS G+VL
Sbjct: 180 KRREFHAEPVDVWSCGIVL 198
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSE-KLPIRWLAL 169
+Y+ + K++HRDL NI L VKI DFGL ++ +G+ + K +R+++
Sbjct: 150 DYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV-----TSLKNDGKRTRSKGTLRYMSP 204
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E + S Y + D+++ G++L E++
Sbjct: 205 EQISSQDYGKEVDLYALGLILAELL 229
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 10 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEIXINKM 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
L + HRD+ N+LL +KISDFGL+ ++ N + + ++A E L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 173 VSN-IYTNKSDVWSFGVVL 190
+ DVWS G+VL
Sbjct: 179 KRREFHAEPVDVWSCGIVL 197
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
E L ++V+RDL NILL ++ISD GL+ + E + + + ++A E
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGT----VGYMAPE 355
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ + YT D W+ G +L+E++ G +P+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIA-GQSPF 385
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK--TYDKFLKE 67
E G++LG+G F V E A+ + E A+K+L+ K +E
Sbjct: 30 EDFKFGKILGEGSFSTTVLA------RELATSR---EYAIKILEKRHIIKENKVPYVTRE 80
Query: 68 INLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE---------------- 110
++M + H V DE L + Y G+L Y+R+
Sbjct: 81 RDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
EYL ++HRDL NILL+ ++I+DFG ++ + ++ Q ++
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTAQY 198
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ E L SD+W+ G +++++V G P+
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 55/223 (24%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
++L E +G+G FG V +G EVAVK+ + + + +E +
Sbjct: 44 IVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREER----SWFREAEIY 88
Query: 72 KDVG-KHDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLREEYLS----------- 114
+ V +H++I+ FI KD +L LV +Y G L YL ++
Sbjct: 89 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST 148
Query: 115 ----------------NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
+ HRDL ++NIL+ I+D GL+ + P
Sbjct: 149 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 208
Query: 159 SEKLPI-RWLALESLVSNIYT------NKSDVWSFGVVLWEIV 194
+ ++ R++A E L +I ++D+++ G+V WEI
Sbjct: 209 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 45/216 (20%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMK 72
L E LG+G F VV + + PT+ E A K++ A+ + K +E + +
Sbjct: 35 LFEELGKGAFSVV-RRCVKKTPTQ--------EYAAKIINTKKLSARDHQKLEREARICR 85
Query: 73 DVGKHDHIVSFIGCCYKDELRLVV----------------EYCALGDLQSYLRE-----E 111
+ KH +IV ++ +V EY + D + +
Sbjct: 86 -LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 144
Query: 112 YLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIY-EQNVFQN--GEPSEKLPIR 165
++ + +VHRDL N+LL+S VK++DFGL+ ++ EQ + G P
Sbjct: 145 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPG------ 198
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+L+ E L + Y D+W+ GV+L+ I+ +G P+
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILY-ILLVGYPPF 233
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
E L ++V+RDL NILL ++ISD GL+ + E + + + ++A E
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGT----VGYMAPE 355
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ + YT D W+ G +L+E++ G +P+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIA-GQSPF 385
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 56/213 (26%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L + + EVA+K + + K +E+ +M+ V
Sbjct: 46 KVIGNGSFGVVFQAKLVE----------SDEVAIKKVLQDKRFKN-----RELQIMRIV- 89
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA--------------------LGDLQSY- 107
KH ++V Y KDE L LV+EY L L Y
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ 149
Query: 108 -LRE-EYLSNNKVVHRDLATRNILLSSPH-VVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
LR Y+ + + HRD+ +N+LL P V+K+ DFG ++ + GEP+ +
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK------ILIAGEPNVSXIC 203
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIV 194
R+ L+ + YT D+WS G V+ E++
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 55/229 (24%)
Query: 6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL 65
G ++L E +G+G FG V +G EVAVK+ + + +
Sbjct: 2 GTIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREER----SWF 46
Query: 66 KEINLMKDVG-KHDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLREEYLS----- 114
+E + + V +H++I+ FI KD +L LV +Y G L YL ++
Sbjct: 47 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI 106
Query: 115 ----------------------NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNV 152
+ HRDL ++NIL+ I+D GL+
Sbjct: 107 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 166
Query: 153 FQNGEPSEKLPI-RWLALESLVSNIYT------NKSDVWSFGVVLWEIV 194
+ P+ ++ R++A E L +I ++D+++ G+V WEI
Sbjct: 167 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 55/223 (24%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
++L E +G+G FG V +G EVAVK+ + + + +E +
Sbjct: 31 IVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREER----SWFREAEIY 75
Query: 72 KDVG-KHDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLREEYLS----------- 114
+ V +H++I+ FI KD +L LV +Y G L YL ++
Sbjct: 76 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST 135
Query: 115 ----------------NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
+ HRDL ++NIL+ I+D GL+ + P
Sbjct: 136 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 195
Query: 159 SEKLPI-RWLALESLVSNIYT------NKSDVWSFGVVLWEIV 194
+ ++ R++A E L +I ++D+++ G+V WEI
Sbjct: 196 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 10 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
L + HRD+ N+LL +KISDFGL+ ++ N + + ++A E L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 173 VSN-IYTNKSDVWSFGVVL 190
+ DVWS G+VL
Sbjct: 179 KRREFHAEPVDVWSCGIVL 197
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 55/223 (24%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
++L E +G+G FG V +G EVAVK+ + + + +E +
Sbjct: 6 IVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREER----SWFREAEIY 50
Query: 72 KDVG-KHDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLREEYLS----------- 114
+ V +H++I+ FI KD +L LV +Y G L YL ++
Sbjct: 51 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST 110
Query: 115 ----------------NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
+ HRDL ++NIL+ I+D GL+ + P
Sbjct: 111 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 170
Query: 159 SEKLPI-RWLALESLVSNIYT------NKSDVWSFGVVLWEIV 194
+ ++ R++A E L +I ++D+++ G+V WEI
Sbjct: 171 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 10 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEIXINKM 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 173
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 55/223 (24%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
++L E +G+G FG V +G EVAVK+ + + + +E +
Sbjct: 11 IVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREER----SWFREAEIY 55
Query: 72 KDVG-KHDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLREEYLS----------- 114
+ V +H++I+ FI KD +L LV +Y G L YL ++
Sbjct: 56 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST 115
Query: 115 ----------------NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
+ HRDL ++NIL+ I+D GL+ + P
Sbjct: 116 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 175
Query: 159 SEKLPI-RWLALESLVSNIYT------NKSDVWSFGVVLWEIV 194
+ ++ R++A E L +I ++D+++ G+V WEI
Sbjct: 176 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 55/223 (24%)
Query: 12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
++L E +G+G FG V +G EVAVK+ + + + +E +
Sbjct: 5 IVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREER----SWFREAEIY 49
Query: 72 KDVG-KHDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLREEYLS----------- 114
+ V +H++I+ FI KD +L LV +Y G L YL ++
Sbjct: 50 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST 109
Query: 115 ----------------NNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEP 158
+ HRDL ++NIL+ I+D GL+ + P
Sbjct: 110 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 169
Query: 159 SEKLPI-RWLALESLVSNIYT------NKSDVWSFGVVLWEIV 194
+ ++ R++A E L +I ++D+++ G+V WEI
Sbjct: 170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 33/182 (18%)
Query: 44 AMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRL--VVEYCAL 101
AM+V K L D + D E ++ + H +V + C++ E RL V+EY
Sbjct: 38 AMKVVKKELVN--DDEDIDWVQTEKHVFEQASNHPFLVG-LHSCFQTESRLFFVIEYVNG 94
Query: 102 GDLQSYLREE--------------------YLSNNKVVHRDLATRNILLSSPHVVKISDF 141
GDL +++ + YL +++RDL N+LL S +K++D+
Sbjct: 95 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 154
Query: 142 GLSEDIYEQNVFQNGEPSEKL--PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGAN 199
G+ ++ + G+ + ++A E L Y D W+ GV+++E++ G +
Sbjct: 155 GMCKE-----GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRS 208
Query: 200 PY 201
P+
Sbjct: 209 PF 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 10 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
L + HRD+ N+LL +KISDFGL+ ++ N + + ++A E L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 173 VSN-IYTNKSDVWSFGVVL 190
+ DVWS G+VL
Sbjct: 179 KRREFHAEPVDVWSCGIVL 197
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 33/182 (18%)
Query: 44 AMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRL--VVEYCAL 101
AM V K L D + D E ++ + H +V + C++ E RL V+EY
Sbjct: 81 AMRVVKKELVN--DDEDIDWVQTEKHVFEQASNHPFLVG-LHSCFQTESRLFFVIEYVNG 137
Query: 102 GDLQSYLREE--------------------YLSNNKVVHRDLATRNILLSSPHVVKISDF 141
GDL +++ + YL +++RDL N+LL S +K++D+
Sbjct: 138 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 197
Query: 142 GLSEDIYEQNVFQNGEPSEKL--PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGAN 199
G+ ++ + G+ + ++A E L Y D W+ GV+++E++ G +
Sbjct: 198 GMCKE-----GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRS 251
Query: 200 PY 201
P+
Sbjct: 252 PF 253
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 10 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
L + HRD+ N+LL +KISDFGL+ ++ N + + ++A E L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 173 VSN-IYTNKSDVWSFGVVL 190
+ DVWS G+VL
Sbjct: 179 KRREFHAEPVDVWSCGIVL 197
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 63/251 (25%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI 68
P+ + ++G+G +G V + A+ A++ +M + D K + L+EI
Sbjct: 27 PDNYEIKHLIGRGSYGYVYLAY-----DKNANKNVAIKKVNRMFEDLIDCK---RILREI 78
Query: 69 NLMKDVGKHDHIVSFIGCCYK------DELRLVVEYCALGDLQSYLR------------- 109
++ + K D+I+ DEL +V+E A DL+ +
Sbjct: 79 TILNRL-KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTI 136
Query: 110 -------EEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS------EDIY-------- 148
E+++ + ++HRDL N LL+ VKI DFGL+ +DI+
Sbjct: 137 LYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEK 196
Query: 149 -------EQNVFQNGEPSEKLPIRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGA- 198
N + + + RW L+ YTN D+WS G + E++ +
Sbjct: 197 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
Query: 199 ---NPYPHIPL 206
NP PL
Sbjct: 257 HINNPTNRFPL 267
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQA-AMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
++LG+G FG V+ E A+G+ AM++ K + D + L E ++++
Sbjct: 15 KLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHT--LTENRVLQN- 65
Query: 75 GKHDHIVSF-IGCCYKDELRLVVEYCALGDLQSYLREE--------------------YL 113
+H + + D L V+EY G+L +L E YL
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 125
Query: 114 SNNK-VVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWLAL 169
+ K VV+RDL N++L +KI+DFGL E I + + G P +LA
Sbjct: 126 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE------YLAP 179
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E L N Y D W GVV++E++
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMM 204
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQA-AMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
++LG+G FG V+ E A+G+ AM++ K + D + L E ++++
Sbjct: 14 KLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHT--LTENRVLQN- 64
Query: 75 GKHDHIVSF-IGCCYKDELRLVVEYCALGDLQSYLREE--------------------YL 113
+H + + D L V+EY G+L +L E YL
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 124
Query: 114 SNNK-VVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWLAL 169
+ K VV+RDL N++L +KI+DFGL E I + + G P +LA
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE------YLAP 178
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E L N Y D W GVV++E++
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMM 203
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 33/182 (18%)
Query: 44 AMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRL--VVEYCAL 101
AM+V K L D + D E ++ + H +V + C++ E RL V+EY
Sbjct: 34 AMKVVKKELVN--DDEDIDWVQTEKHVFEQASNHPFLVG-LHSCFQTESRLFFVIEYVNG 90
Query: 102 GDLQSYLREE--------------------YLSNNKVVHRDLATRNILLSSPHVVKISDF 141
GDL +++ + YL +++RDL N+LL S +K++D+
Sbjct: 91 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 150
Query: 142 GLSEDIYEQNVFQNGEPSEKL--PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGAN 199
G+ ++ + G+ + ++A E L Y D W+ GV+++E++ G +
Sbjct: 151 GMCKE-----GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRS 204
Query: 200 PY 201
P+
Sbjct: 205 PF 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 33/182 (18%)
Query: 44 AMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRL--VVEYCAL 101
AM+V K L D + D E ++ + H +V + C++ E RL V+EY
Sbjct: 49 AMKVVKKELVN--DDEDIDWVQTEKHVFEQASNHPFLVG-LHSCFQTESRLFFVIEYVNG 105
Query: 102 GDLQSYLREE--------------------YLSNNKVVHRDLATRNILLSSPHVVKISDF 141
GDL +++ + YL +++RDL N+LL S +K++D+
Sbjct: 106 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 165
Query: 142 GLSEDIYEQNVFQNGEPSEKL--PIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGAN 199
G+ ++ + G+ + ++A E L Y D W+ GV+++E++ G +
Sbjct: 166 GMCKE-----GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRS 219
Query: 200 PY 201
P+
Sbjct: 220 PF 221
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQA-AMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
++LG+G FG V+ E A+G+ AM++ K + D + L E ++++
Sbjct: 16 KLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHT--LTENRVLQN- 66
Query: 75 GKHDHIVSF-IGCCYKDELRLVVEYCALGDLQSYLREE--------------------YL 113
+H + + D L V+EY G+L +L E YL
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 126
Query: 114 SNNK-VVHRDLATRNILLSSPHVVKISDFGL-SEDIYEQNVFQN--GEPSEKLPIRWLAL 169
+ K VV+RDL N++L +KI+DFGL E I + + G P +LA
Sbjct: 127 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE------YLAP 180
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E L N Y D W GVV++E++
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMM 205
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 38/183 (20%)
Query: 47 VAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC-YKDELRLVVEYCALGDL- 104
VA+K++ N + EI +K++ +H HI +++ +V+EYC G+L
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNL-RHQHICQLYHVLETANKIFMVLEYCPGGELF 96
Query: 105 -----QSYLREE--------------YLSNNKVVHRDLATRNILLSSPHVVKISDFGL-- 143
Q L EE Y+ + HRDL N+L H +K+ DFGL
Sbjct: 97 DYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCA 156
Query: 144 ----SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYT-NKSDVWSFGVVLWEIVTLGA 198
++D + Q + + + A E + Y +++DVWS G++L+ ++ G
Sbjct: 157 KPKGNKDYHLQTCCGS--------LAYAAPELIQGKSYLGSEADVWSMGILLY-VLMCGF 207
Query: 199 NPY 201
P+
Sbjct: 208 LPF 210
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 44/212 (20%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK--FLKEINLMKDV 74
VLG+G FG V+ + + +G AVK+LK + + D + E ++
Sbjct: 30 VLGKGSFGKVMLARVKE------TGDL---YAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 75 GKHDHIVSFIGCCYK--DELRLVVEYCALGDLQSYLREE--------------------Y 112
H + CC++ D L V+E+ GDL ++++ +
Sbjct: 81 RNHPFLTQLF-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN---GEPSEKLPIRWLAL 169
L + +++RDL N+LL K++DFG+ ++ V G P ++A
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPD------YIAP 193
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
E L +Y D W+ GV+L+E++ G P+
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLC-GHAPF 224
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 45/216 (20%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMK 72
L E LG+G F VV + + + +GQ E A K++ A+ + K +E + +
Sbjct: 8 LFEELGKGAFSVVRRCM------KIPTGQ---EYAAKIINTKKLSARDHQKLEREARICR 58
Query: 73 DVGKHDHIVSFIGCCYKDELR-LVVEYCALGDL-QSYLREEYLSN--------------- 115
+ KH +IV ++ LV + G+L + + EY S
Sbjct: 59 -LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 116 ----NKVVHRDLATRNILLSSPH---VVKISDFGLSEDIY--EQNVFQ-NGEPSEKLPIR 165
N +VHRDL N+LL+S VK++DFGL+ ++ +Q F G P
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG------ 171
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+L+ E L + Y D+W+ GV+L+ I+ +G P+
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILY-ILLVGYPPF 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 11 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 61
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 62 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 174
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL 198
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 45/216 (20%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMK 72
L E LG+G F VV + + + +GQ E A K++ A+ + K +E + +
Sbjct: 8 LFEELGKGAFSVVRRCM------KIPTGQ---EYAAKIINTKKLSARDHQKLEREARICR 58
Query: 73 DVGKHDHIVSFIGCCYKDELR-LVVEYCALGDL-QSYLREEYLSN--------------- 115
+ KH +IV ++ LV + G+L + + EY S
Sbjct: 59 -LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 116 ----NKVVHRDLATRNILLSSPH---VVKISDFGLSEDIY--EQNVFQ-NGEPSEKLPIR 165
N +VHRDL N+LL+S VK++DFGL+ ++ +Q F G P
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG------ 171
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+L+ E L + Y D+W+ GV+L+ I+ +G P+
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILY-ILLVGYPPF 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 9 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 59
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 60 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 172
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVL 196
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 10 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 173
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 10 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 173
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 57/216 (26%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G F + K + S QA AVK++ +A T KEI +K H
Sbjct: 19 LGEGSFSICRKCV------HKKSNQA---FAVKIISKRMEANTQ----KEITALKLCEGH 65
Query: 78 DHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE--------------------YLSN 115
+IV + + D+L LV+E G+L ++++ ++ +
Sbjct: 66 PNIVK-LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 116 NKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIR------- 165
VVHRDL N+L + + +KI DFG F +P + P++
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFG----------FARLKPPDNQPLKTPCFTLH 174
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ A E L N Y D+WS GV+L+ +++ G P+
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLS-GQVPF 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 11 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 61
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 62 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 174
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL 198
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 10 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 173
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 11 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 61
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 62 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 174
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL 198
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 11 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 61
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 62 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 174
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL 198
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 11 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 61
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 62 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 174
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL 198
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 10 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 173
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 10 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 173
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 10 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 173
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 42/189 (22%)
Query: 37 EGASGQAAMEV--------AVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY 88
EGA+G+ + V AVK++ + KEI + K + H+++V F G
Sbjct: 16 EGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVVKFYGHRR 74
Query: 89 KDELR-LVVEYCALGDLQSYLREE--------------------YLSNNKVVHRDLATRN 127
+ ++ L +EYC+ G+L + + YL + HRD+ N
Sbjct: 75 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 134
Query: 128 ILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWLALESLVSN-IYTNKS 181
+LL +KISDFGL+ VF+ L + ++A E L +
Sbjct: 135 LLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 182 DVWSFGVVL 190
DVWS G+VL
Sbjct: 189 DVWSCGIVL 197
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI + K
Sbjct: 11 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEICINKM 61
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 62 LN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL 172
L + HRD+ N+LL +KISDFGL+ ++ N + + ++A E L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 173 VSN-IYTNKSDVWSFGVVL 190
+ DVWS G+VL
Sbjct: 180 KRREFHAEPVDVWSCGIVL 198
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 47/207 (22%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDK-FLKEINLMKDVGK 76
+G G +G V + G+ +VA+K L ++ + K +E+ L+K + +
Sbjct: 33 VGSGAYGAVCSAV---------DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-R 82
Query: 77 HDHIVSFIGCCYKDE-------LRLVVEYCALGDLQSYLREEYLSNNKV----------- 118
H++++ + DE LV+ + DL ++ E L +++
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFLVYQMLKGL 141
Query: 119 --------VHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+HRDL N+ ++ +KI DFGL+ + E + RW
Sbjct: 142 RYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA-------DSEMXGXVVTRWYRAP 194
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVT 195
++ N YT D+WS G ++ E++T
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMIT 221
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 39/225 (17%)
Query: 2 ALSCGYPPERLILGEVLGQGEFGVV---VKGLLGDGPTEGASGQAAMEVAVKMLKANADA 58
++C E L E LG+G F VV VK L G AAM + K L A
Sbjct: 3 TITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAG-------QEYAAMIINTKKLSARDHQ 55
Query: 59 KTYD-----KFLKEINLMK------DVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSY 107
K + LK N+++ + G H I + E + EY + D
Sbjct: 56 KLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHC 115
Query: 108 LRE-----EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIY-EQNVFQN--G 156
+++ + VVHR+L N+LL+S VK++DFGL+ ++ EQ + G
Sbjct: 116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 175
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
P +L+ E L + Y D+W+ GV+L+ I+ +G P+
Sbjct: 176 TPG------YLSPEVLRKDPYGKPVDLWACGVILY-ILLVGYPPF 213
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 48/211 (22%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G +GVV K SGQ +AVK ++A +++ + L ++++
Sbjct: 59 LGRGAYGVVEKM------RHVPSGQI---MAVKRIRATVNSQEQKRLLMDLDISMRTVDC 109
Query: 78 DHIVSFIGCCYKD----------ELRLVVEYCALGDLQSYLREEYL-------------- 113
V+F G +++ + L Y + D + E+ L
Sbjct: 110 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 169
Query: 114 -SNNKVVHRDLATRNILLSSPHVVKISDFGLSE---DIYEQNVFQNGEPSEKLPIRWLAL 169
S V+HRD+ N+L+++ VK+ DFG+S D + + +P ++A
Sbjct: 170 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP-------YMAP 222
Query: 170 ESLVSNI----YTNKSDVWSFGVVLWEIVTL 196
E + + Y+ KSD+WS G+ + E+ L
Sbjct: 223 ERINPELNQKGYSVKSDIWSLGITMIELAIL 253
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 63/227 (27%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGK 76
VLGQG FG VVK + + A+K ++ + + L E+ L+ +
Sbjct: 13 VLGQGAFGQVVKA---------RNALDSRYYAIKKIRHTEEKLS--TILSEVMLLASLN- 60
Query: 77 HDHIVSFIGCCY--------------KDELRLVVEYCALGDLQSYLREE----------- 111
H ++V + K L + +EYC G L + E
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 112 ----------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ-NVFQNGEPSE 160
Y+ + ++HRDL NI + VKI DFGL+++++ ++ + S+
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK--LDSQ 178
Query: 161 KLP------------IRWLALESLV-SNIYTNKSDVWSFGVVLWEIV 194
LP ++A E L + Y K D++S G++ +E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 112 YLSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDIYEQNVF-QNGEPSEKLPIRWL 167
YL + +VHRD+ NILL + + +KI DFGLS + F ++ + ++L +
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS------SFFSKDYKLRDRLGTAYY 214
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++ Y K DVWS GV+++ I+ G P+
Sbjct: 215 IAPEVLKKKYNEKCDVWSCGVIMY-ILLCGYPPF 247
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 48/211 (22%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G +GVV K SGQ +AVK ++A +++ + L ++++
Sbjct: 15 LGRGAYGVVEKM------RHVPSGQI---MAVKRIRATVNSQEQKRLLMDLDISMRTVDC 65
Query: 78 DHIVSFIGCCYKD----------ELRLVVEYCALGDLQSYLREEYL-------------- 113
V+F G +++ + L Y + D + E+ L
Sbjct: 66 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125
Query: 114 -SNNKVVHRDLATRNILLSSPHVVKISDFGLSE---DIYEQNVFQNGEPSEKLPIRWLAL 169
S V+HRD+ N+L+++ VK+ DFG+S D +++ +P ++A
Sbjct: 126 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP-------YMAP 178
Query: 170 ESLVSNI----YTNKSDVWSFGVVLWEIVTL 196
E + + Y+ KSD+WS G+ + E+ L
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIELAIL 209
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 38/216 (17%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L EV+G+G F VV + + +GQ V + K + + LK +
Sbjct: 30 LCEVIGKGPFSVVRRCI------NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 83
Query: 74 VGKHDHIVSFIGCCYKD-ELRLVVEYCALGDL-------------------QSYLRE--- 110
+ KH HIV + D L +V E+ DL Y+R+
Sbjct: 84 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 111 --EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y +N ++HRD+ +LL+S VK+ FG++ + E + G
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP---H 200
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + Y DVW GV+L+ I+ G P+
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILF-ILLSGCLPF 235
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 38/216 (17%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L EV+G+G F VV + + +GQ V + K + + LK +
Sbjct: 28 LCEVIGKGPFSVVRRCI------NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 74 VGKHDHIVSFIGCCYKD-ELRLVVEYCALGDL-------------------QSYLRE--- 110
+ KH HIV + D L +V E+ DL Y+R+
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 111 --EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIR 165
Y +N ++HRD+ +LL+S VK+ FG++ + E + G
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP---H 198
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + Y DVW GV+L+ I+ G P+
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILF-ILLSGCLPF 233
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + K+++RDL NI L VKI DFGL + K +R+++ E
Sbjct: 136 DYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN----DGKRXRSKGTLRYMSPE 191
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIV 194
+ S Y + D+++ G++L E++
Sbjct: 192 QISSQDYGKEVDLYALGLILAELL 215
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDI-YEQNVFQNGEPSEKLPI-- 164
++L N + HRDL NIL P+ VKI DFGL I + P P
Sbjct: 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 165 -RWLALE-----SLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E S ++IY + D+WS GV+L+ I+ G P+
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY-ILLSGYPPF 226
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 43/204 (21%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
L + LG+G +G V L + TE A VAVK++ + KEI +
Sbjct: 11 LVQTLGEGAYGEV--QLAVNRVTEEA-------VAVKIVDMKRAVDCPENIKKEI-CINA 60
Query: 74 VGKHDHIVSFIGCCYKDELR-LVVEYCALGDLQSYLREE--------------------Y 112
+ H+++V F G + ++ L +EYC+ G+L + + Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 113 LSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL-----PIRWL 167
L + HRD+ N+LL +KISDFGL+ VF+ L + ++
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRYNNRERLLNKMCGTLPYV 174
Query: 168 ALESLVSN-IYTNKSDVWSFGVVL 190
A E L + DVWS G+VL
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL 198
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
++L ++ + HRD+ N+L +S V+K++DFG +++ QN + ++
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE-----TTQNALQTPCYTPYYV 196
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 197 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGFPPF 229
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 61/220 (27%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV-GK 76
+G+G +G V G +VAVK+ +A + +E + + V +
Sbjct: 45 IGKGRYGEVWMG-----------KWRGEKVAVKVFFTTEEAS----WFRETEIYQTVLMR 89
Query: 77 HDHIVSFIGCCYK-----DELRLVVEYCALGDLQSYLREEYLSNNK-------------- 117
H++I+ FI K +L L+ +Y G L YL+ L
Sbjct: 90 HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCH 149
Query: 118 -------------VVHRDLATRNILLSSPHVVKISDFGLS----EDIYEQNVFQNGEPSE 160
+ HRDL ++NIL+ I+D GL+ D E ++ N
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGT 209
Query: 161 KLPIRWLALESLVSNIYTNK------SDVWSFGVVLWEIV 194
K R++ E L ++ N +D++SFG++LWE+
Sbjct: 210 K---RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
++L ++ + HRD+ N+L +S V+K++DFG +++ QN + ++
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE-----TTQNALQTPCYTPYYV 177
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 178 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGFPPF 210
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 93/245 (37%), Gaps = 73/245 (29%)
Query: 9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVK-MLKANADAKTYDKFLKE 67
P+R + ++G G +G V E VA+K +L+ D + L+E
Sbjct: 52 PDRYEIRHLIGTGSYGHVC---------EAYDKLEKRVVAIKKILRVFEDLIDCKRILRE 102
Query: 68 INLMKDVGKHDHIVSFIGCCYK------DELRLVVEYCALGDLQSYLRE----------- 110
I ++ + HDH+V + DEL +V+E A D + R
Sbjct: 103 IAILNRLN-HDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKT 160
Query: 111 ---------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEK 161
+Y+ + ++HRDL N L++ VK+ DFGL+ + + +NG + +
Sbjct: 161 LLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV---DYPENG--NSQ 215
Query: 162 LPI----------------------------RWLALESLV--SNIYTNKSDVWSFGVVLW 191
LPI RW L+ YT DVWS G +
Sbjct: 216 LPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFA 275
Query: 192 EIVTL 196
E++ +
Sbjct: 276 ELLNM 280
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 13/90 (14%)
Query: 118 VVHRDLATRNILLSSP---HVVKISDFGLSEDIY--EQNVFQ-NGEPSEKLPIRWLALES 171
VVHRDL N+LL+S VK++DFGL+ ++ +Q F G P +L+ E
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG------YLSPEV 177
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
L Y D+W+ GV+L+ I+ +G P+
Sbjct: 178 LRKEAYGKPVDIWACGVILY-ILLVGYPPF 206
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 112 YLSNNK-VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
Y+ N K + HRD+ NIL+ VK+SDFG SE + ++ + + E +P + + E
Sbjct: 166 YIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNE 225
Query: 171 SLVSNIYTNKSDVWSFGVVLW 191
S + K D+WS G+ L+
Sbjct: 226 SSYNGA---KVDIWSLGICLY 243
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 52/227 (22%)
Query: 16 EVLGQGEFGVVVKGLLG-DGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
E +G GEFG V K + DG A++ + K L + D + L+E+ +
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCI------YAIKRSKKPLAGSVDEQNA---LREVYAHAVL 67
Query: 75 GKHDHIVSFIGCCYKDELRLVV-EYCALGDL----------QSYLRE------------- 110
G+H H+V + +D+ L+ EYC G L SY +E
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQN--VFQNGEPSEKLPI--- 164
Y+ + +VH D+ NI +S + + ED + N +F+ G+ I
Sbjct: 128 LRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP 187
Query: 165 -------RWLALESLVSNIYTN--KSDVWSFGVVLWEIVTLGANPYP 202
R+LA E L N YT+ K+D+ F + L + GA P P
Sbjct: 188 QVEEGDSRFLANEVLQEN-YTHLPKADI--FALALTVVCAAGAEPLP 231
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 118 VVHRDLATRNILLSSP---HVVKISDFGLSEDIY-EQNVFQN--GEPSEKLPIRWLALES 171
VVHRDL N+LL+S VK++DFGL+ ++ EQ + G P +L+ E
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPG------YLSPEV 195
Query: 172 LVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
L + Y D+W+ GV+L+ I+ +G P+
Sbjct: 196 LRKDPYGKPVDLWACGVILY-ILLVGYPPF 224
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 52/227 (22%)
Query: 16 EVLGQGEFGVVVKGLLG-DGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
E +G GEFG V K + DG A++ + K L + D + L+E+ +
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCI------YAIKRSKKPLAGSVDEQNA---LREVYAHAVL 65
Query: 75 GKHDHIVSFIGCCYKDELRLVV-EYCALGDL----------QSYLRE------------- 110
G+H H+V + +D+ L+ EYC G L SY +E
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQN--VFQNGEPSEKLPI--- 164
Y+ + +VH D+ NI +S + + ED + N +F+ G+ I
Sbjct: 126 LRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP 185
Query: 165 -------RWLALESLVSNIYTN--KSDVWSFGVVLWEIVTLGANPYP 202
R+LA E L N YT+ K+D+ F + L + GA P P
Sbjct: 186 QVEEGDSRFLANEVLQEN-YTHLPKADI--FALALTVVCAAGAEPLP 229
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 52/227 (22%)
Query: 16 EVLGQGEFGVVVKGLLG-DGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
E +G GEFG V K + DG A++ + K L + D + L+E+ +
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCI------YAIKRSKKPLAGSVDEQNA---LREVYAHAVL 63
Query: 75 GKHDHIVSFIGCCYKDELRLVV-EYCALGDL----------QSYLRE------------- 110
G+H H+V + +D+ L+ EYC G L SY +E
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQN--VFQNGEPSEKLPI--- 164
Y+ + +VH D+ NI +S + + ED + N +F+ G+ I
Sbjct: 124 LRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP 183
Query: 165 -------RWLALESLVSNIYTN--KSDVWSFGVVLWEIVTLGANPYP 202
R+LA E L N YT+ K+D+ F + L + GA P P
Sbjct: 184 QVEEGDSRFLANEVLQEN-YTHLPKADI--FALALTVVXAAGAEPLP 227
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 47/224 (20%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEV-AVKMLKANA---DAKTYDKFL 65
E L +VLG G +G V SG ++ A+K+LK AKT +
Sbjct: 54 ENFELLKVLGTGAYGKVF-------LVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR 106
Query: 66 KEINLMKDVGKHDHIVSF-IGCCYKDELRLVVEYCALGDLQSYLRE-------------- 110
E +++ + + +V+ + +L L+++Y G+L ++L +
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG 166
Query: 111 ------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI 164
E+L +++RD+ NILL S V ++DFGLS++ + +E+
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-------ADETERAYD 219
Query: 165 RWLALESLVSNI-------YTNKSDVWSFGVVLWEIVTLGANPY 201
+E + +I + D WS GV+++E++T GA+P+
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT-GASPF 262
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 52/227 (22%)
Query: 16 EVLGQGEFGVVVKGLLG-DGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV 74
E +G GEFG V K + DG A++ + K L + D + L+E+ +
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCI------YAIKRSKKPLAGSVDEQNA---LREVYAHAVL 65
Query: 75 GKHDHIVSFIGCCYKDELRLVV-EYCALGDL----------QSYLRE------------- 110
G+H H+V + +D+ L+ EYC G L SY +E
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 111 -EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQN--VFQNGE---------- 157
Y+ + +VH D+ NI +S + + ED + N +F+ G+
Sbjct: 126 LRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP 185
Query: 158 PSEKLPIRWLALESLVSNIYTN--KSDVWSFGVVLWEIVTLGANPYP 202
E+ R+LA E L N YT+ K+D+ F + L + GA P P
Sbjct: 186 QVEEGDSRFLANEVLQEN-YTHLPKADI--FALALTVVCAAGAEPLP 229
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 27 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 72
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 73 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSXIC 185
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 225
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 71
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSXIC 184
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 224
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 48/224 (21%)
Query: 13 ILGEVLGQGEFGVVVKGLLGDGPTEGA-SGQAAMEVAVKMLKANADAKTYDKFLKEINLM 71
+ E+LG+G + V +GA S Q E AVK+++ A + + +E+ +
Sbjct: 16 LTSELLGEGAYAKV----------QGAVSLQNGKEYAVKIIEKQA-GHSRSRVFREVETL 64
Query: 72 KDVGKHDHIVSFIGCCYKDELR--LVVEYCALGDLQSYLREE------------------ 111
+ +I+ I ++D+ R LV E G + ++++++
Sbjct: 65 YQCQGNKNILELIEF-FEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA 123
Query: 112 --YLSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDIYEQNVFQN-GEPSEKLPI- 164
+L + HRDL NIL SP VKI DF L + N P P
Sbjct: 124 LDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 165 --RWLALESL-----VSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E + + Y + D+WS GVVL+ I+ G P+
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLY-IMLSGYPPF 226
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 71
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSXIC 184
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 224
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 107 YLREEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPI 164
YL+E++ V+HRD+ NILL +K+ DFG+S + + G + P
Sbjct: 139 YLKEKH----GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPE 194
Query: 165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
R + + Y ++DVWS G+ L E+ T G PY
Sbjct: 195 RIDPPDPTKPD-YDIRADVWSLGISLVELAT-GQFPY 229
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 30 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 75
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 76 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 134
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSXIC 188
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 38 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 83
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 84 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSXIC 196
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 236
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N EP ++
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TEPC--YTPYYV 184
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPF 217
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 38 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 83
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 84 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSXIC 196
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 236
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 60 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 105
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 106 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSXIC 218
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 258
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 45 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 90
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 91 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 149
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 150 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSXIC 203
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 243
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 34 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 79
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 80 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 139 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSXIC 192
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 232
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 37/180 (20%)
Query: 65 LKEINLMKDVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQSYLRE------------ 110
KE+ +M+ + +H +V+ + ++DE + +VV+ GDL+ +L++
Sbjct: 63 FKELQIMQGL-EHPFLVN-LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF 120
Query: 111 --------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKL 162
+YL N +++HRD+ NILL V I+DF ++ + + ++
Sbjct: 121 ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKP- 179
Query: 163 PIRWLALESLVSNI---YTNKSDVWSFGVVLWEIVTLGANPYPHIPLC----RIVHYLST 215
++A E S Y+ D WS GV +E++ G PY HI IVH T
Sbjct: 180 ---YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR-GRRPY-HIRSSTSSKEIVHTFET 234
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 71
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSYIC 184
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 224
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKE 67
P L L E+ +G FG V K L + VAVK+ D +++ E
Sbjct: 13 PRGSLQLLEIKARGRFGCVWKAQLMND-----------FVAVKIFPLQ-DKQSWQS---E 57
Query: 68 INLMKDVG-KHDHIVSFI-----GCCYKDELRLVVEYCALGDLQSYLREEYLSNNK---- 117
+ G KH++++ FI G + EL L+ + G L YL+ ++ N+
Sbjct: 58 REIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHV 117
Query: 118 --------------------------VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQN 151
+ HRD ++N+LL S ++DFGL+
Sbjct: 118 AETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVR----- 172
Query: 152 VFQNGEP-----SEKLPIRWLALESLVSNIYTNKS-----DVWSFGVVLWEIVT 195
F+ G+P + R++A E L I + D+++ G+VLWE+V+
Sbjct: 173 -FEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 43/214 (20%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD 73
E LG G F VV E A+G+ AVK + A EI +++
Sbjct: 26 FKETLGTGAFSEVVLA------EEKATGKL---FAVKCIPKKALKGKESSIENEIAVLRK 76
Query: 74 VGKHDHIVSFIGCCYK-DELRLVVEYCALGDLQSYLREE--------------------Y 112
+ KH++IV+ + L LV++ + G+L + E+ Y
Sbjct: 77 I-KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYY 135
Query: 113 LSNNKVVHRDLATRNILLSSP---HVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIRWL 167
L +VHRDL N+L S + ISDFGLS+ + +V G P ++
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPG------YV 189
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y+ D WS GV+ + I+ G P+
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAY-ILLCGYPPF 222
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 39 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 84
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 85 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSYIC 197
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 237
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 31 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKL- 75
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSYIC 189
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 229
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 54 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKLD 99
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 100 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSYIC 212
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 252
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 62 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKL- 106
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSYIC 220
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 260
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + K +E+ +M+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQGKAFKN-----RELQIMRKLD 71
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSXIC 184
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 224
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 60 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKL- 104
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSYIC 218
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 258
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAP 202
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 246
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 105 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKL- 149
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSYIC 263
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 303
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 90/227 (39%), Gaps = 63/227 (27%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGK 76
VLGQG FG VVK + + A+K ++ + + L E+ L+ +
Sbjct: 13 VLGQGAFGQVVKA---------RNALDSRYYAIKKIRHTEEKLS--TILSEVMLLASLN- 60
Query: 77 HDHIVSFIGCCY--------------KDELRLVVEYCALGDLQSYLREE----------- 111
H ++V + K L + +EYC L + E
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 112 ----------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ-NVFQNGEPSE 160
Y+ + ++HRDL NI + VKI DFGL+++++ ++ + S+
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK--LDSQ 178
Query: 161 KLP------------IRWLALESLV-SNIYTNKSDVWSFGVVLWEIV 194
LP ++A E L + Y K D++S G++ +E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGYVATRWYRAP 193
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 237
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + + K +E+ +M+ +
Sbjct: 64 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQDKRFKN-----RELQIMRKL- 108
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSYIC 222
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 262
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGYVATRWYRAP 197
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 241
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW A
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 170 ESLVSNIYTNKS-DVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
E +++ ++ N++ D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAP 196
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 240
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAP 196
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 240
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 111 EYLSNNKVVHRDLATRNIL---LSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIR 165
+YL + +VHRDL N+L L + ISDFGLS+ +V G P
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG------ 183
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E L Y+ D WS GV+ + I+ G P+
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYPPF 218
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N + ++
Sbjct: 145 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYV 200
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 201 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPF 233
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 111 EYLSNNKVVHRDLATRNIL---LSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIR 165
+YL + +VHRDL N+L L + ISDFGLS+ +V G P
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG------ 183
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E L Y+ D WS GV+ + I+ G P+
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYPPF 218
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + K +E+ +M+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQGKAFKN-----RELQIMRKLD 71
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSYIC 184
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 224
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR-WLAL 169
E++ N VV+RDL NILL V+ISD GL+ D F +P + ++A
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD------FSKKKPHASVGTHGYMAP 359
Query: 170 ESLVSNI-YTNKSDVWSFGVVLWEIVTLGANPY 201
E L + Y + +D +S G +L++++ G +P+
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR-WLAL 169
E++ N VV+RDL NILL V+ISD GL+ D F +P + ++A
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD------FSKKKPHASVGTHGYMAP 359
Query: 170 ESLVSNI-YTNKSDVWSFGVVLWEIVTLGANPY 201
E L + Y + +D +S G +L++++ G +P+
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPF 391
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N + ++
Sbjct: 137 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYV 192
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 193 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPF 225
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR-WLAL 169
E++ N VV+RDL NILL V+ISD GL+ D F +P + ++A
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD------FSKKKPHASVGTHGYMAP 359
Query: 170 ESLVSNI-YTNKSDVWSFGVVLWEIVTLGANPY 201
E L + Y + +D +S G +L++++ G +P+
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIR-WLAL 169
E++ N VV+RDL NILL V+ISD GL+ D F +P + ++A
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD------FSKKKPHASVGTHGYMAP 358
Query: 170 ESLVSNI-YTNKSDVWSFGVVLWEIVTLGANPY 201
E L + Y + +D +S G +L++++ G +P+
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPF 390
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N + ++
Sbjct: 136 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYV 191
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 192 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPF 224
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHV---VKISDFGLSEDI-YEQNVFQNGEPSEKLPI-- 164
++L N + HRDL NIL P+ VKI DF L I + P P
Sbjct: 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 165 -RWLALE-----SLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E S ++IY + D+WS GV+L+ I+ G P+
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY-ILLSGYPPF 226
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N + ++
Sbjct: 135 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYV 190
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 191 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPF 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 56/221 (25%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G G FGVV + L D SG+ VA+K + K +E+ +M+ +
Sbjct: 26 KVIGNGSFGVVYQAKLCD------SGEL---VAIKKVLQGKAFKN-----RELQIMRKLD 71
Query: 76 KHDHIVSFIGCCY-----KDE--LRLVVEYCA-----------------------LGDLQ 105
H +IV Y KDE L LV++Y L Q
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 106 SYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPS-EKLP 163
+ Y+ + + HRD+ +N+LL V+K+ DFG ++ + GEP+ +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR------GEPNVSYIC 184
Query: 164 IRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 224
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 112 YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALES 171
YL ++HRD+ NI+++ +K+ DFG + + +F + I + A E
Sbjct: 145 YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGT----IEYCAPEV 200
Query: 172 LVSNIYTNKS-DVWSFGVVLWEIVTLGANPY 201
L+ N Y ++WS GV L+ +V NP+
Sbjct: 201 LMGNPYRGPELEMWSLGVTLYTLV-FEENPF 230
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N + ++
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYV 186
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPF 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N + ++
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYV 184
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPF 217
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGXVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
E+L +++RDL N+LL V+ISD GL+ ++ G ++A E
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP---GFMAPE 359
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVT 195
L+ Y D ++ GV L+E++
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N + ++
Sbjct: 130 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYV 185
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 186 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPF 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 111 EYLSNNKVVHRDLATRNIL---LSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIR 165
+YL + +VHRDL N+L L + ISDFGLS+ +V G P
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG------ 183
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E L Y+ D WS GV+ + I+ G P+
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYPPF 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 111 EYLSNNKVVHRDLATRNIL---LSSPHVVKISDFGLSEDIYEQNVFQN--GEPSEKLPIR 165
+YL + +VHRDL N+L L + ISDFGLS+ +V G P
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG------ 183
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
++A E L Y+ D WS GV+ + I+ G P+
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYPPF 218
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N + ++
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYV 186
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPF 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N + ++
Sbjct: 181 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYV 236
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 237 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPF 269
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
+Y+ + VVHRDL N+ ++ +KI DFGL+ + E + + RW A
Sbjct: 158 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA-------DAEMTGYVVTRWYRAP 210
Query: 170 ESLVSNIYTNKS-DVWSFGVVLWEIVT 195
E ++S ++ N++ D+WS G ++ E++T
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLT 237
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N + ++
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYV 230
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D+WS GV+++ I+ G P+
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPF 263
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 48/211 (22%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G +GVV K SGQ AVK ++A +++ + L ++++
Sbjct: 42 LGRGAYGVVEKX------RHVPSGQIX---AVKRIRATVNSQEQKRLLXDLDISXRTVDC 92
Query: 78 DHIVSFIGCCYKD----------ELRLVVEYCALGDLQSYLREEYL-------------- 113
V+F G +++ + L Y + D + E+ L
Sbjct: 93 PFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 152
Query: 114 -SNNKVVHRDLATRNILLSSPHVVKISDFGLSE---DIYEQNVFQNGEPSEKLPIRWLAL 169
S V+HRD+ N+L+++ VK DFG+S D +++ +P + A
Sbjct: 153 HSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP-------YXAP 205
Query: 170 ESLVSNI----YTNKSDVWSFGVVLWEIVTL 196
E + + Y+ KSD+WS G+ E+ L
Sbjct: 206 ERINPELNQKGYSVKSDIWSLGITXIELAIL 236
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 202
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 246
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
E+L +++RDL N+LL V+ISD GL+ ++ G ++A E
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP---GFMAPE 359
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVT 195
L+ Y D ++ GV L+E++
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
E+L +++RDL N+LL V+ISD GL+ ++ G ++A E
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP---GFMAPE 359
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVT 195
L+ Y D ++ GV L+E++
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 197
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 214
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 258
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 210
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 254
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 211
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 255
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 149 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 201
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 245
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 211
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 255
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 203
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 247
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
E+L +++RDL N+LL V+ISD GL+ ++ G ++A E
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP---GFMAPE 359
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVT 195
L+ Y D ++ GV L+E++
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 203
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 247
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 193
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 237
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 203
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 247
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 198
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 242
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 210
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 254
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 193
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 196
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 240
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 138 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 190
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 234
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 196
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 240
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 197
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 241
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 47/215 (21%)
Query: 14 LGEVLGQGEFGVV-------------VKGLLGDG-PTEGASGQAAMEVAVK-MLKANADA 58
+G LG+G+FG V +K L EG Q E+ ++ L+
Sbjct: 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNIL 77
Query: 59 KTYDKF--LKEINLM----------KDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQS 106
+ Y+ F K I LM K++ KH + +EL + YC
Sbjct: 78 RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC------- 130
Query: 107 YLREEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
KV+HRD+ N+L+ +KI+DFG S ++ ++ + + +
Sbjct: 131 -------HERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGT---LDY 178
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
L E + + K D+W GV+ +E + +G P+
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFL-VGMPPF 212
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 187
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 231
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 197
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 241
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 188
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 193
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 237
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
+Y+ + VVHRDL N+ ++ +KI DFGL+ + E + + RW A
Sbjct: 140 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA-------DAEMTGYVVTRWYRAP 192
Query: 170 ESLVSNIYTNKS-DVWSFGVVLWEIVT 195
E ++S ++ N++ D+WS G ++ E++T
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLT 219
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 94 LVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNV 152
L V Y L Q + Y+ + + HRD+ +N+LL V+K+ DFG ++ +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 175
Query: 153 FQNGEPS-EKLPIRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYP 202
GEP+ + R+ L+ + YT+ DVWS G VL E++ LG +P
Sbjct: 176 ---GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFP 224
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 188
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 137 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 189
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 233
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + RW
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYRAP 211
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 255
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 187
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 231
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 47/215 (21%)
Query: 14 LGEVLGQGEFGVV-------------VKGLLGDG-PTEGASGQAAMEVAVK-MLKANADA 58
+G LG+G+FG V +K L EG Q E+ ++ L+
Sbjct: 19 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNIL 78
Query: 59 KTYDKF--LKEINLM----------KDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQS 106
+ Y+ F K I LM K++ KH + +EL + YC
Sbjct: 79 RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC------- 131
Query: 107 YLREEYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRW 166
KV+HRD+ N+L+ +KI+DFG S ++ ++ + + +
Sbjct: 132 -------HERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGT---LDY 179
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
L E + + K D+W GV+ +E + +G P+
Sbjct: 180 LPPEMIEGKTHDEKVDLWCAGVLCYEFL-VGMPPF 213
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAP 187
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 231
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 119 VHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYT 178
HRD+ NIL+S+ + DFG++ ++ + Q G L + A E + T
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTL--YYXAPERFSESHAT 213
Query: 179 NKSDVWSFGVVLWEIVTLGANPY 201
++D+++ VL+E +T G+ PY
Sbjct: 214 YRADIYALTCVLYECLT-GSPPY 235
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAP 187
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-------EMTGYVATRWYRAP 198
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 242
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-------EMTGYVATRWYRAP 198
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 242
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-------EMTGYVATRWYRAP 198
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 242
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + RW
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATRWYRAP 214
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 258
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
++L + ++HRDL NI++ S +KI DFGL+ + EP E + + A E
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM---EP-EVVTRYYRAPE 195
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIV 194
++ Y D+WS G ++ E+V
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 51/224 (22%)
Query: 25 VVVKGLLGDGPTEGASGQAAME---VAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIV 81
VV + +LG G + Q + + VAVK + + D L EI L+ + H +++
Sbjct: 35 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVI 90
Query: 82 SFIGCCYKDE-LRLVVEYCAL-----------GDLQSYLREEY---------------LS 114
+ D L + +E C L D L++EY L
Sbjct: 91 RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 115 NNKVVHRDLATRNILLSSPH-------------VVKISDFGLSEDIYE-QNVFQNGEPSE 160
+ K++HRDL +NIL+S+ + ISDFGL + + Q F+ +
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 161 KLPIRWLA---LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
W A LE T D++S G V + I++ G +P+
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 107 YLREE-----YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEK 161
YLR+ +L + +VH D+ NI L K+ DFGL + E GE E
Sbjct: 162 YLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL---LVELGTAGAGEVQEG 218
Query: 162 LPIRWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
P R++A E L+ Y +DV+S G+ + E+
Sbjct: 219 DP-RYMAPE-LLQGSYGTAADVFSLGLTILEVA 249
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 51/224 (22%)
Query: 25 VVVKGLLGDGPTEGASGQAAME---VAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIV 81
VV + +LG G + Q + + VAVK + + D L EI L+ + H +++
Sbjct: 35 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVI 90
Query: 82 SFIGCCYKDE-LRLVVEYCAL-----------GDLQSYLREEY---------------LS 114
+ D L + +E C L D L++EY L
Sbjct: 91 RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 115 NNKVVHRDLATRNILLSSPH-------------VVKISDFGLSEDIYE-QNVFQNGEPSE 160
+ K++HRDL +NIL+S+ + ISDFGL + + Q F+ +
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 161 KLPIRWLA---LESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
W A LE T D++S G V + I++ G +P+
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI D+GL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 40/159 (25%)
Query: 76 KHDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLREEYLSNNK------------- 117
KH++I+ FIG + +L L+ + G L +L+ +S N+
Sbjct: 76 KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLA 135
Query: 118 ----------------VVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEK 161
+ HRD+ ++N+LL + I+DFGL+ +E +
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK-FEAGKSAGDTHGQV 194
Query: 162 LPIRWLALESLVSNIYTNKS-----DVWSFGVVLWEIVT 195
R++A E L I + D+++ G+VLWE+ +
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 118 VVHRDLATRNILLSSPHVVKISDFGLS-EDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VVHRDL NILL+ + + I DF L+ ED + N + + RW LV
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLAREDTADAN------KTHYVTHRWYRAPELVMQF 208
Query: 177 --YTNKSDVWSFGVVLWEIVTLGA 198
+T D+WS G V+ E+ A
Sbjct: 209 KGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DFGL+ + E + + RW
Sbjct: 168 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-------DDEMTGYVATRWYRAP 220
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP 202
++ N Y D+WS G ++ E++T G +P
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLT-GRTLFP 253
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 118 VVHRDLATRNILLSSPHVVKISDFGLS-EDIYEQNVFQNGEPSEKLPIRWLALESLVSNI 176
VVHRDL NILL+ + + I DF L+ ED + N + + RW LV
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLAREDTADAN------KTHYVTHRWYRAPELVMQF 208
Query: 177 --YTNKSDVWSFGVVLWEIVTLGA 198
+T D+WS G V+ E+ A
Sbjct: 209 KGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 42/215 (19%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVK--MLKANADAKTYDKFLKEINLMKD 73
+V+G+G FG V L + A AM++ K MLK A F +E +++
Sbjct: 80 KVIGRGAFGEVAVVKL-----KNADKVFAMKILNKWEMLKRAETAC----FREERDVL-- 128
Query: 74 VGKHDHIVSFIGCCYKDE--LRLVVEYCALGDLQS----------------YLREEYLSN 115
V ++ + ++D+ L LV++Y GDL + YL E ++
Sbjct: 129 VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI 188
Query: 116 NKV-----VHRDLATRNILLSSPHVVKISDFG----LSEDIYEQNVFQNGEPSEKLPIRW 166
+ V VHRD+ NIL+ ++++DFG L ED Q+ G P P
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL 248
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A+E Y + D WS GV ++E++ G P+
Sbjct: 249 QAMEG-GKGRYGPECDWWSLGVCMYEML-YGETPF 281
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 64/216 (29%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYD-KFLKEINLMKDVGK 76
LG+G +G V K + D T VA+K ++ + + ++E++L+K++ +
Sbjct: 42 LGEGTYGEVYKAI--DTVTNET-------VAIKRIRLEHEEEGVPGTAIREVSLLKEL-Q 91
Query: 77 HDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLREE--------------------YLSN 115
H +I+ + + L L+ EY A DL+ Y+ + + +
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS 150
Query: 116 NKVVHRDLATRNILLS------SPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLAL 169
+ +HRDL +N+LLS +P V+KI DFGL+ +PIR
Sbjct: 151 RRCLHRDLKPQNLLLSVSDASETP-VLKIGDFGLARAF-------------GIPIRQFTH 196
Query: 170 ESLV-----------SNIYTNKSDVWSFGVVLWEIV 194
E + S Y+ D+WS + E++
Sbjct: 197 EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 34/196 (17%)
Query: 20 QGEFGVVVKGLLGDG-PTEGASGQAAMEVAVK-MLKANADAKTYDKF--LKEINLM---- 71
Q +F + +K L EG Q E+ ++ L+ + Y+ F K I LM
Sbjct: 37 QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFA 96
Query: 72 ------KDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREEYLSNNKVVHRDLAT 125
K++ KH + +EL + YC KV+HRD+
Sbjct: 97 PRGELYKELQKHGRFDEQRSATFMEELADALHYC--------------HERKVIHRDIKP 142
Query: 126 RNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWS 185
N+L+ +KI+DFG S ++ ++ + + +L E + + K D+W
Sbjct: 143 ENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGT---LDYLPPEMIEGKTHDEKVDLWC 197
Query: 186 FGVVLWEIVTLGANPY 201
GV+ +E + +G P+
Sbjct: 198 AGVLCYEFL-VGMPPF 212
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
++L + ++HRDL NI++ S +KI DFGL+ + E + + A E
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT----PEVVTRYYRAPE 195
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLG 197
++ Y D+WS G ++ E++ G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
++L + ++HRDL NI++ S +KI DFGL+ + EP E + + A E
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM---EP-EVVTRYYRAPE 195
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIV 194
++ Y D+WS G ++ E+V
Sbjct: 196 VILGMGYKENVDLWSVGCIMGEMV 219
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 55/228 (24%)
Query: 25 VVVKGLLGDGPTEGASGQAAME---VAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIV 81
VV + +LG G + Q + + VAVK + + D L EI L+ + H +++
Sbjct: 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVI 72
Query: 82 SFIGCCYKDE-LRLVVEYCAL-----------GDLQSYLREEY---------------LS 114
+ D L + +E C L D L++EY L
Sbjct: 73 RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 115 NNKVVHRDLATRNILLSSPH-------------VVKISDFGLSEDIYE-QNVFQNGEPSE 160
+ K++HRDL +NIL+S+ + ISDFGL + + Q+ F+ +
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 161 KLPIRWLALESL--VSNIYTNKS-----DVWSFGVVLWEIVTLGANPY 201
W A E L +N+ T + D++S G V + I++ G +P+
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ ++I DFGL+ E E + + RW
Sbjct: 145 KYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE-------EMTGYVATRWYRAP 197
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIV 194
++ N Y D+WS G ++ E++
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ N + ++
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----TPCYTPYYV 230
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
A E L Y D WS GV+ + I+ G P+
Sbjct: 231 APEVLGPEKYDKSCDXWSLGVIXY-ILLCGYPPF 263
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ ++I DFGL+ E E + + RW
Sbjct: 145 KYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE-------EMTGYVATRWYRAP 197
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIV 194
++ N Y D+WS G ++ E++
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
E ++ Y D+WS GV++ E++ G
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGG 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + N + + R+ A
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----RTASTNFMMTPYVVTRYYRAP 192
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 193 EVILGMGYKENVDIWSVGCIMGELV 217
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 87/227 (38%), Gaps = 63/227 (27%)
Query: 17 VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGK 76
VLGQG FG VVK + + A+K ++ + + L E+ L+ +
Sbjct: 13 VLGQGAFGQVVKA---------RNALDSRYYAIKKIRHTEEKLS--TILSEVXLLASLN- 60
Query: 77 HDHIVSFIGCCY--------------KDELRLVVEYCALGDLQSYLREE----------- 111
H ++V + K L + EYC L + E
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 112 ----------YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQ-NVFQNGEPSE 160
Y+ + ++HR+L NI + VKI DFGL+++++ ++ + S+
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK--LDSQ 178
Query: 161 KLP------------IRWLALESLV-SNIYTNKSDVWSFGVVLWEIV 194
LP ++A E L + Y K D +S G++ +E +
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
E ++ Y D+WS GV++ E++ G
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGG 222
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + N + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----RTACTNFMMTPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 195 EVILGMGYAANVDIWSVGCIMGELV 219
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 52/219 (23%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAME-VAVKMLKANADAKTY-DKFLKE 67
+R + ++G+G FG VVK A + E VA+K++K + K + ++ E
Sbjct: 54 DRYEIDSLIGKGSFGQVVK----------AYDRVEQEWVAIKIIK---NKKAFLNQAQIE 100
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREEYLSNNK---------- 117
+ L++ + KHD + + K C + ++ SY + L N
Sbjct: 101 VRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR 160
Query: 118 -------------------VVHRDLATRNILLSSPH--VVKISDFGLSEDIYEQNVFQNG 156
++H DL NILL +P +KI DFG S + Q ++Q
Sbjct: 161 KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQXI 219
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVT 195
+ + + E L+ Y D+WS G +L E+ T
Sbjct: 220 QSR-----FYRSPEVLLGMPYDLAIDMWSLGCILVEMHT 253
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI----RW 166
++L + ++HRDL NI++ S +KI DFGL+ G +P +
Sbjct: 142 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--------GTSFMMVPFVVTRYY 193
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
A E ++ Y D+WS G ++ E++ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKGG 224
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 52/219 (23%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAME-VAVKMLKANADAKTY-DKFLKE 67
+R + ++G+G FG VVK A + E VA+K++K + K + ++ E
Sbjct: 35 DRYEIDSLIGKGSFGQVVK----------AYDRVEQEWVAIKIIK---NKKAFLNQAQIE 81
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREEYLSNNK---------- 117
+ L++ + KHD + + K C + ++ SY + L N
Sbjct: 82 VRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR 141
Query: 118 -------------------VVHRDLATRNILLSSPH--VVKISDFGLSEDIYEQNVFQNG 156
++H DL NILL +P +KI DFG S + Q ++Q
Sbjct: 142 KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL-GQRIYQXI 200
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVT 195
+ + + E L+ Y D+WS G +L E+ T
Sbjct: 201 QSR-----FYRSPEVLLGMPYDLAIDMWSLGCILVEMHT 234
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 104/226 (46%), Gaps = 61/226 (26%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFL--KE 67
E+ ++ E LG+GEFG+V + + E +S + M VK+ K D+ L KE
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCV------ETSSKKTYMAKFVKV-------KGTDQVLVKKE 51
Query: 68 INLMKDVGKHDHIV----SFIGCCYKDELRLVVEYCALGD----------------LQSY 107
I+++ ++ +H +I+ SF +EL ++ E+ + D + SY
Sbjct: 52 ISIL-NIARHRNILHLHESFESM---EELVMIFEFISGLDIFERINTSAFELNEREIVSY 107
Query: 108 LRE-----EYLSNNKVVHRDLATRNILLSSPH--VVKISDFGLSEDIYEQNVFQNGEPSE 160
+ + ++L ++ + H D+ NI+ + +KI +FG + + +P +
Sbjct: 108 VHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL---------KPGD 158
Query: 161 KLPIRWLALESLVSNIY-----TNKSDVWSFGVVLWEIVTLGANPY 201
+ + A E ++ + +D+WS G +++ +++ G NP+
Sbjct: 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPF 203
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 52/219 (23%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAME-VAVKMLKANADAKTY-DKFLKE 67
+R + ++G+G FG VVK A + E VA+K++K + K + ++ E
Sbjct: 54 DRYEIDSLIGKGSFGQVVK----------AYDRVEQEWVAIKIIK---NKKAFLNQAQIE 100
Query: 68 INLMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLREEYLSNNK---------- 117
+ L++ + KHD + + K C + ++ SY + L N
Sbjct: 101 VRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR 160
Query: 118 -------------------VVHRDLATRNILLSSPH--VVKISDFGLSEDIYEQNVFQNG 156
++H DL NILL +P +KI DFG S + Q ++Q
Sbjct: 161 KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL-GQRIYQXI 219
Query: 157 EPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVT 195
+ + + E L+ Y D+WS G +L E+ T
Sbjct: 220 QSR-----FYRSPEVLLGMPYDLAIDMWSLGCILVEMHT 253
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 55/228 (24%)
Query: 25 VVVKGLLGDGPTEGASGQAAME---VAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIV 81
VV + +LG G + Q + + VAVK + + D L EI L+ + H +++
Sbjct: 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVI 72
Query: 82 SFIGCCYKDE-LRLVVEYCAL-----------GDLQSYLREEY---------------LS 114
+ D L + +E C L D L++EY L
Sbjct: 73 RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 115 NNKVVHRDLATRNILLSSPH-------------VVKISDFGLSEDIYE-QNVFQNGEPSE 160
+ K++HRDL +NIL+S+ + ISDFGL + + Q F+ +
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 192
Query: 161 KLPIRWLALESL--VSNIYTNKS-----DVWSFGVVLWEIVTLGANPY 201
W A E L +N+ T + D++S G V + I++ G +P+
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 52/220 (23%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G+G FG VVK + VA+KM++ + + + + +EI +++ +
Sbjct: 103 KVIGKGSFGQVVKAY---------DHKVHQHVALKMVRN--EKRFHRQAAEEIRILEHLR 151
Query: 76 KHDH------IVSFIGCCYKDELRLVVEYCALGDLQSYLREEY----------------- 112
K D I +++ + + E ++ + + ++
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 113 ----LSNNKVVHRDLATRNILLSSP--HVVKISDFGLSEDIYE-QNVFQNGEPSEKLPIR 165
L N+++H DL NILL +K+ DFG S YE Q V+ +
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSR-----F 264
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
+ A E ++ Y D+WS G +L E++T YP +P
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLT----GYPLLP 300
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ ++I DFGL+ E E + + RW
Sbjct: 137 KYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE-------EMTGYVATRWYRAP 189
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIV 194
++ N Y D+WS G ++ E++
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELL 215
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 52/220 (23%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G+G FG VVK + VA+KM++ + + + + +EI +++ +
Sbjct: 103 KVIGKGSFGQVVKAY---------DHKVHQHVALKMVRN--EKRFHRQAAEEIRILEHLR 151
Query: 76 KHDH------IVSFIGCCYKDELRLVVEYCALGDLQSYLREEY----------------- 112
K D I +++ + + E ++ + + ++
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 113 ----LSNNKVVHRDLATRNILLSSP--HVVKISDFGLSEDIYE-QNVFQNGEPSEKLPIR 165
L N+++H DL NILL +K+ DFG S YE Q V+ +
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSR-----F 264
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
+ A E ++ Y D+WS G +L E++T YP +P
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLT----GYPLLP 300
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI FGL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 52/220 (23%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG 75
+V+G+G FG VVK + VA+KM++ + + + + +EI +++ +
Sbjct: 103 KVIGKGXFGQVVKAY---------DHKVHQHVALKMVRN--EKRFHRQAAEEIRILEHLR 151
Query: 76 KHDH------IVSFIGCCYKDELRLVVEYCALGDLQSYLREEY----------------- 112
K D I +++ + + E ++ + + ++
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 113 ----LSNNKVVHRDLATRNILLSSP--HVVKISDFGLSEDIYE-QNVFQNGEPSEKLPIR 165
L N+++H DL NILL +K+ DFG S YE Q V+ +
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQSR-----F 264
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP 205
+ A E ++ Y D+WS G +L E++T YP +P
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLT----GYPLLP 300
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 119 VHRDLATRNILLSSPHVVKISDFG----LSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
VHRD+ N+LL ++++DFG +++D Q+ G P P A+E +
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPY 201
Y + D WS GV ++E++ G P+
Sbjct: 257 K-YGPECDWWSLGVCMYEML-YGETPF 281
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 119 VHRDLATRNILLSSPHVVKISDFG----LSEDIYEQNVFQNGEPSEKLPIRWLALESLVS 174
VHRD+ N+LL ++++DFG +++D Q+ G P P A+E +
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 175 NIYTNKSDVWSFGVVLWEIVTLGANPY 201
Y + D WS GV ++E++ G P+
Sbjct: 273 K-YGPECDWWSLGVCMYEML-YGETPF 297
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 39/211 (18%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKML-KANADAKTYDKFLK-EINLM 71
+G LG+G+FG V ++ VA+K+L K+ + + + L+ EI +
Sbjct: 27 IGRPLGKGKFGNVYLA---------REKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 72 KDVGKHDHIVSFIGCCY-KDELRLVVEYCALGDLQSYLREE------------------- 111
+ H +I+ Y + + L++EY G+L L++
Sbjct: 78 AHL-HHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADAL 136
Query: 112 -YLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
Y KV+HRD+ N+LL +KI+DFG S ++ ++ + + +L E
Sbjct: 137 MYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGT---LDYLPPE 191
Query: 171 SLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
+ ++ K D+W GV+ +E++ +G P+
Sbjct: 192 MIEGRMHNEKVDLWCIGVLCYELL-VGNPPF 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI D GL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 50 KMLKANADAKTYDKFLKEINLMKDVGKHD--HIVSFIGCCYKDELRLVVEYCALGDLQSY 107
K+ ++AD K + L+ D +HD HI+ F ++ + + + L
Sbjct: 85 KVFLSHADRKVW--------LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 136
Query: 108 LRE--EYLSNNKVVHRDLATRNILL--SSPH--VVKISDFGLSEDIYEQNVFQNGEPSEK 161
+ + YL N V+HRDL NIL+ P VKI+D G + ++ + +
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR-LFNSPLKPLADLDPV 195
Query: 162 LPIRWLALESLV--SNIYTNKSDVWSFGVVLWEIVT------------LGANPYPHIPLC 207
+ W L+ + YT D+W+ G + E++T +NPY H L
Sbjct: 196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255
Query: 208 RIVHYL 213
RI + +
Sbjct: 256 RIFNVM 261
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI DF L+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI D GL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 195
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
E ++ Y D+WS G ++ E++ G
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGG 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
E ++ Y D+WS G ++ E++ G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALE 170
+Y+ + ++HRDL N+ ++ +KI D GL+ + E + + RW
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR-------HTDDEMTGYVATRWYRAP 191
Query: 171 SLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYP---HIPLCRIV 210
++ N Y D+WS G ++ E++T G +P HI +++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 235
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
E ++ Y D+WS G ++ E++ G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 232
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
E ++ Y D+WS G ++ E++ G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI----RW 166
++L + ++HRDL NI++ S +KI DFGL+ G P +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--------TAGTSFMMTPYVVTRYY 191
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIV 194
A E ++ Y D+WS G ++ E+V
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 232
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI----RW 166
++L + ++HRDL NI++ S +KI DFGL+ G P +
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--------TAGTSFMMTPYVVTRYY 184
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIV 194
A E ++ Y D+WS G ++ E+V
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPI----RW 166
++L + ++HRDL NI++ S +KI DFGL+ G P +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--------TAGTSFMMTPYVVTRYY 191
Query: 167 LALESLVSNIYTNKSDVWSFGVVLWEIV 194
A E ++ Y D+WS G ++ E+V
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
E ++ Y D+WS G ++ E++ G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 35/181 (19%)
Query: 56 ADAKTYDKFLKEINLMKDVGKH-DHIVSFIGCCYKDELRLVVEYCALGDLQSYL------ 108
AD +T D + EI + + +H D I+ D+ +V C DL S+L
Sbjct: 45 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI 104
Query: 109 ----REEYLSN----------NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
R+ Y N + +VH DL N L+ ++K+ DFG++ + + +
Sbjct: 105 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQM-QPDTTS 162
Query: 155 NGEPSEKLPIRWLALESL--VSNIYTN---------KSDVWSFGVVLWEIVTLGANPYPH 203
+ S+ + ++ E++ +S+ N KSDVWS G +L+ +T G P+
Sbjct: 163 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPFQQ 221
Query: 204 I 204
I
Sbjct: 222 I 222
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 35/181 (19%)
Query: 56 ADAKTYDKFLKEINLMKDVGKH-DHIVSFIGCCYKDELRLVVEYCALGDLQSYL------ 108
AD +T D + EI + + +H D I+ D+ +V C DL S+L
Sbjct: 49 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI 108
Query: 109 ----REEYLSN----------NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
R+ Y N + +VH DL N L+ ++K+ DFG++ + + +
Sbjct: 109 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQM-QPDTTS 166
Query: 155 NGEPSEKLPIRWLALESL--VSNIYTN---------KSDVWSFGVVLWEIVTLGANPYPH 203
+ S+ + ++ E++ +S+ N KSDVWS G +L+ +T G P+
Sbjct: 167 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPFQQ 225
Query: 204 I 204
I
Sbjct: 226 I 226
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 35/181 (19%)
Query: 56 ADAKTYDKFLKEINLMKDVGKH-DHIVSFIGCCYKDELRLVVEYCALGDLQSYL------ 108
AD +T D + EI + + +H D I+ D+ +V C DL S+L
Sbjct: 93 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI 152
Query: 109 ----REEYLSN----------NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
R+ Y N + +VH DL N L+ ++K+ DFG++ + + +
Sbjct: 153 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQM-QPDTTS 210
Query: 155 NGEPSEKLPIRWLALESL--VSNIYTN---------KSDVWSFGVVLWEIVTLGANPYPH 203
+ S+ + ++ E++ +S+ N KSDVWS G +L+ +T G P+
Sbjct: 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPFQQ 269
Query: 204 I 204
I
Sbjct: 270 I 270
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 47 VAVKMLKANADAKTYDK-FLKEINLMKDVGKHDHIVSFIGCC--------YKD------- 90
VA+K L +T+ K +E+ LMK V H +I+S + ++D
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVN-HKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 91 ---ELRLVVEYCALGDLQSYLREEYLSNNK------VVHRDLATRNILLSSPHVVKISDF 141
L V++ + SYL + L K ++HRDL NI++ S +KI DF
Sbjct: 111 MDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 170
Query: 142 GLSEDIYEQNVFQNGEPSEKLPIRWL-ALESLVSNIYTNKSDVWSFGVVLWEIV 194
GL+ + + + R+ A E ++ Y D+WS G ++ E+V
Sbjct: 171 GLARTAGTSFMM-----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
E ++ Y D+WS G ++ E++ G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 35/181 (19%)
Query: 56 ADAKTYDKFLKEINLMKDVGKH-DHIVSFIGCCYKDELRLVVEYCALGDLQSYL------ 108
AD +T D + EI + + +H D I+ D+ +V C DL S+L
Sbjct: 93 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI 152
Query: 109 ----REEYLSN----------NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
R+ Y N + +VH DL N L+ ++K+ DFG++ + + +
Sbjct: 153 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQM-QPDTTS 210
Query: 155 NGEPSEKLPIRWLALESL--VSNIYTN---------KSDVWSFGVVLWEIVTLGANPYPH 203
+ S+ + ++ E++ +S+ N KSDVWS G +L+ +T G P+
Sbjct: 211 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPFQQ 269
Query: 204 I 204
I
Sbjct: 270 I 270
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 35/181 (19%)
Query: 56 ADAKTYDKFLKEINLMKDVGKH-DHIVSFIGCCYKDELRLVVEYCALGDLQSYL------ 108
AD +T D + EI + + +H D I+ D+ +V C DL S+L
Sbjct: 46 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI 105
Query: 109 ----REEYLSN----------NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
R+ Y N + +VH DL N L+ ++K+ DFG++ + + +
Sbjct: 106 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQM-QPDTTS 163
Query: 155 NGEPSEKLPIRWLALESL--VSNIYTN---------KSDVWSFGVVLWEIVTLGANPYPH 203
+ S+ + ++ E++ +S+ N KSDVWS G +L+ +T G P+
Sbjct: 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPFQQ 222
Query: 204 I 204
I
Sbjct: 223 I 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 188
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIVTLG 197
E ++ Y D+WS G ++ E++ G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 187
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 195
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 83/218 (38%), Gaps = 54/218 (24%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKT-YDKFLKEINLMKDVGK 76
+G+G F V KGL + +EVA L+ K+ +F +E +K + +
Sbjct: 34 IGRGSFKTVYKGL---------DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGL-Q 83
Query: 77 HDHIVSFIGCCY-----KDELRLVVEYCALGDLQSYLREEYLSNNKV------------- 118
H +IV F K + LV E G L++YL+ + KV
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQ 143
Query: 119 ---------VHRDLATRNILLSSPH-VVKISDFGLSEDIYEQNVFQN---GEPSEKLPIR 165
+HRDL NI ++ P VKI D GL+ ++ F G P P
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA--TLKRASFAKAVIGTPEFXAPEX 201
Query: 166 WLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPH 203
+ Y DV++FG E T + YP+
Sbjct: 202 Y-------EEKYDESVDVYAFGXCXLEXAT---SEYPY 229
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 139 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 193
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 194 EVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 195
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 35/181 (19%)
Query: 56 ADAKTYDKFLKEINLMKDVGKH-DHIVSFIGCCYKDELRLVVEYCALGDLQSYL------ 108
AD +T D + EI + + +H D I+ D+ +V C DL S+L
Sbjct: 93 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI 152
Query: 109 ----REEYLSN----------NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
R+ Y N + +VH DL N L+ ++K+ DFG++ + + +
Sbjct: 153 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQM-QPDTTS 210
Query: 155 NGEPSEKLPIRWLALESL--VSNIYTN---------KSDVWSFGVVLWEIVTLGANPYPH 203
+ S+ + ++ E++ +S+ N KSDVWS G +L+ +T G P+
Sbjct: 211 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPFQQ 269
Query: 204 I 204
I
Sbjct: 270 I 270
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 35/181 (19%)
Query: 56 ADAKTYDKFLKEINLMKDVGKH-DHIVSFIGCCYKDELRLVVEYCALGDLQSYL------ 108
AD +T D + EI + + +H D I+ D+ +V C DL S+L
Sbjct: 65 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI 124
Query: 109 ----REEYLSN----------NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
R+ Y N + +VH DL N L+ ++K+ DFG++ + + +
Sbjct: 125 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQM-QPDTTS 182
Query: 155 NGEPSEKLPIRWLALESL--VSNIYTN---------KSDVWSFGVVLWEIVTLGANPYPH 203
+ S+ + ++ E++ +S+ N KSDVWS G +L+ +T G P+
Sbjct: 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPFQQ 241
Query: 204 I 204
I
Sbjct: 242 I 242
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 188
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 194
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 145 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 199
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 200 EVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL-AL 169
++L + ++HRDL NI++ S +KI DFGL+ + + + R+ A
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAP 188
Query: 170 ESLVSNIYTNKSDVWSFGVVLWEIV 194
E ++ Y D+WS G ++ E+V
Sbjct: 189 EVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 51/218 (23%)
Query: 16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEV-AVKMLKANADAKTYDK--FLKEINLMK 72
+V+G+G FG V + +A+ +V A+K+L K D F +E ++M
Sbjct: 81 KVIGRGAFGEV----------QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 130
Query: 73 DVGKHDHIVSFIGCCYKDE--LRLVVEYCALGDL--------------QSYLREEYLSNN 116
+V C ++D+ L +V+EY GDL + Y E L+ +
Sbjct: 131 -FANSPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALD 188
Query: 117 KV-----VHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ----NGEPSEKLPIRWL 167
+ +HRD+ N+LL +K++DFG + E + G P ++
Sbjct: 189 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD------YI 242
Query: 168 ALESLVSN----IYTNKSDVWSFGVVLWEIVTLGANPY 201
+ E L S Y + D WS GV L+E++ +G P+
Sbjct: 243 SPEVLKSQGGDGYYGRECDWWSVGVFLFEML-VGDTPF 279
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 35/181 (19%)
Query: 56 ADAKTYDKFLKEINLMKDVGKH-DHIVSFIGCCYKDELRLVVEYCALGDLQSYL------ 108
AD +T D + EI + + +H D I+ D+ +V C DL S+L
Sbjct: 65 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI 124
Query: 109 ----REEYLSN----------NKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ 154
R+ Y N + +VH DL N L+ ++K+ DFG++ + + +
Sbjct: 125 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQM-QPDXXX 182
Query: 155 NGEPSEKLPIRWLALESL--VSNIYTN---------KSDVWSFGVVLWEIVTLGANPYPH 203
+ S+ + ++ E++ +S+ N KSDVWS G +L+ +T G P+
Sbjct: 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPFQQ 241
Query: 204 I 204
I
Sbjct: 242 I 242
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 22/128 (17%)
Query: 111 EYLSNNKVVHRDLATRNILLSSP----------HVVKISDFGLSEDIYEQNVFQNGEPSE 160
EYL + +++H D+ N+LLSS H V + GL +D+ + E
Sbjct: 180 EYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETH- 238
Query: 161 KLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI---PLCRIVHYLSTGY 217
+A E ++ K DVWS ++ ++ G +P+ PLC +
Sbjct: 239 ------MAPEVVLGRSCDAKVDVWSSCCMMLHMLN-GCHPWTQFFRGPLCLKIASEPPPV 291
Query: 218 RMERPASC 225
R E P SC
Sbjct: 292 R-EIPPSC 298
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 73/231 (31%)
Query: 10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN 69
+R + + GQG FG V G E ++G M VA+K + + + +E+
Sbjct: 23 DRFQVERMAGQGTFGTVQLG------KEKSTG---MSVAIKKVIQDPRFRN-----RELQ 68
Query: 70 LMKDVG--KHDHIVSFIGCCY----KDE----LRLVVEY-------CALGDLQSYLREE- 111
+M+D+ H +IV Y +D L +V+EY C ++Y R +
Sbjct: 69 IMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCC----RNYYRRQV 124
Query: 112 ---------------------YLSNNKVVHRDLATRNILLSSPH-VVKISDFGLSEDIYE 149
+L + V HRD+ N+L++ +K+ DFG ++ +
Sbjct: 125 APPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL-- 182
Query: 150 QNVFQNGEPSEK----LPIRWLALESLV--SNIYTNKSDVWSFGVVLWEIV 194
PSE + R+ L+ + YT D+WS G + E++
Sbjct: 183 -------SPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 29/94 (30%)
Query: 111 EYLSNNKVVHRDLATRNILLSSPH---VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWL 167
+YL + + HRD+ N+L +S ++K++DFG +++ GE
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-------TGEK--------- 174
Query: 168 ALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY 201
Y D+WS GV+++ I+ G P+
Sbjct: 175 ---------YDKSCDMWSLGVIMY-ILLCGYPPF 198
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 28/175 (16%)
Query: 46 EVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDEL---RLVVEYCALG 102
++ VK+LK + + E + H +++ +G C L+ + G
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 94
Query: 103 DLQSYLREEYLSNNKVVHRDLATRNIL--------------LSSPHVVKISDFGLSEDIY 148
L + L E N VV + A + L L H + + ED+
Sbjct: 95 SLYNVLHE---GTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMT 151
Query: 149 EQNVFQNGEPSEKLPIR-----WLALESLVSNIY-TNK--SDVWSFGVVLWEIVT 195
+ + + S + P R W+A E+L TN+ +D+WSF V+LWE+VT
Sbjct: 152 ARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 88/205 (42%), Gaps = 38/205 (18%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-------KTYDKFLK 66
+G +G+G FGV+ EG + +VA+K +DA +TY K L
Sbjct: 13 VGRRIGEGSFGVIF---------EGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTY-KLLA 62
Query: 67 EINLMKDV------GKHD-HIVSFIGCCYKDEL-----RLVVEYCALGDLQSYLREEYLS 114
+ +V G H+ ++ +G +D L + V+ A+ Q R + +
Sbjct: 63 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH 122
Query: 115 NNKVVHRDLATRNILLSSP-----HVVKISDFGL----SEDIYEQNVFQNGEPSEKLPIR 165
+V+RD+ N L+ P +++ + DFG+ + + +Q++ + + R
Sbjct: 123 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR 182
Query: 166 WLALESLVSNIYTNKSDVWSFGVVL 190
++++ + + + + D+ + G V
Sbjct: 183 YMSINTHLGREQSRRDDLEALGHVF 207
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 88/205 (42%), Gaps = 38/205 (18%)
Query: 14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-------KTYDKFLK 66
+G +G+G FGV+ EG + +VA+K +DA +TY K L
Sbjct: 14 VGRRIGEGSFGVIF---------EGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTY-KLLA 63
Query: 67 EINLMKDV------GKHD-HIVSFIGCCYKDEL-----RLVVEYCALGDLQSYLREEYLS 114
+ +V G H+ ++ +G +D L + V+ A+ Q R + +
Sbjct: 64 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH 123
Query: 115 NNKVVHRDLATRNILLSSP-----HVVKISDFGL----SEDIYEQNVFQNGEPSEKLPIR 165
+V+RD+ N L+ P +++ + DFG+ + + +Q++ + + R
Sbjct: 124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR 183
Query: 166 WLALESLVSNIYTNKSDVWSFGVVL 190
++++ + + + + D+ + G V
Sbjct: 184 YMSINTHLGREQSRRDDLEALGHVF 208
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 33/158 (20%)
Query: 87 CYKDE--LRLVVEYCALGDLQS----------------YLREEYLSNNKV-----VHRDL 123
++DE L LV+EY GDL + YL E ++ + V VHRD+
Sbjct: 129 AFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDI 188
Query: 124 ATRNILLSSPHVVKISDFG----LSEDIYEQNVFQNGEPSEKLP-IRWLALESLVSNIYT 178
NILL ++++DFG L D +++ G P P I + Y
Sbjct: 189 KPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYG 248
Query: 179 NKSDVWSFGVVLWEIVTLGANPYPHIPLC----RIVHY 212
+ D W+ GV +E+ G P+ +IVHY
Sbjct: 249 PECDWWALGVFAYEMF-YGQTPFYADSTAETYGKIVHY 285
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 104 LQSYLREEYLSNNKVVHRDLATRNILLSSP-----HVVKISDFGLSED 146
+Q R EY+ +++RD+ N L+ P H + I DFGL+++
Sbjct: 107 IQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKE 154
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 52/216 (24%)
Query: 14 LGEVLGQGEFGVVVKG-LLGDGPTEGASGQAAMEVAVKMLKAN--------ADAKTYDKF 64
LG +LG+G FG V G L D ++VA+K++ N +D+ T
Sbjct: 35 LGPLLGKGGFGTVFAGHRLTD----------RLQVAIKVIPRNRVLGWSPLSDSVTCPL- 83
Query: 65 LKEINLMKDVGK---HDHIVSFIGCCYKDE-LRLVVEY-CALGDLQSYLRE--------- 110
E+ L+ VG H ++ + E LV+E DL Y+ E
Sbjct: 84 --EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS 141
Query: 111 -----------EYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEP 158
++ + VVHRD+ NIL+ K+ DFG ++++
Sbjct: 142 RCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGT 201
Query: 159 SEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIV 194
P W++ + + VWS G++L+++V
Sbjct: 202 RVYSPPEWISRH----QYHALPATVWSLGILLYDMV 233
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 82/221 (37%), Gaps = 62/221 (28%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG VV+ L + A G++ +VA+K+++ + + EIN++K + +
Sbjct: 27 LGEGTFGKVVECL------DHARGKS--QVALKIIRNVGKYREAARL--EINVLKKIKEK 76
Query: 78 DHIVSFIGCCYKDELRLVVEYCALGDLQ-----SYLRE---------------------- 110
D F+ D C +L +L+E
Sbjct: 77 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 136
Query: 111 EYLSNNKVVHRDLATRNILLSSPHV-------------------VKISDFGLSEDIYEQN 151
+L N++ H DL NIL + ++++DFG + +E +
Sbjct: 137 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH 196
Query: 152 VFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWE 192
+ P E ++ + DVWS G +L+E
Sbjct: 197 TTIVATRHYRPP------EVILELGWAQPCDVWSIGCILFE 231
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 83 FIGCCYKDELRLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILL---SSPHVVKIS 139
F C K L+ V+ L D Q R EY+ + +HRD+ N L+ ++V I
Sbjct: 93 FNFCSRKFSLKTVL---LLAD-QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYII 148
Query: 140 DFGLSEDIYEQNVFQNGEPSEKLPI----RWLALESLVSNIYTNKSDVWSFGVVLWEIVT 195
DFGL++ + Q+ E + R+ ++ + + + + D+ S G VL
Sbjct: 149 DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM-YFN 207
Query: 196 LGANPY 201
LG+ P+
Sbjct: 208 LGSLPW 213
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 119 VHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ----NGEPSEKLPIRWLALESLVS 174
+HRD+ N+LL +K++DFG + ++ + + G P +++ E L S
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD------YISPEVLKS 248
Query: 175 N----IYTNKSDVWSFGVVLWEIVTLGANPY 201
Y + D WS GV L+E++ +G P+
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEML-VGDTPF 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 119 VHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ----NGEPSEKLPIRWLALESLVS 174
+HRD+ N+LL +K++DFG + ++ + + G P +++ E L S
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD------YISPEVLKS 248
Query: 175 N----IYTNKSDVWSFGVVLWEIVTLGANPY 201
Y + D WS GV L+E++ +G P+
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEML-VGDTPF 278
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 82/221 (37%), Gaps = 62/221 (28%)
Query: 18 LGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH 77
LG+G FG VV+ L + A G++ +VA+K+++ + + EIN++K + +
Sbjct: 36 LGEGTFGKVVECL------DHARGKS--QVALKIIRNVGKYREAARL--EINVLKKIKEK 85
Query: 78 DHIVSFIGCCYKDELRLVVEYCALGDLQ-----SYLRE---------------------- 110
D F+ D C +L +L+E
Sbjct: 86 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 145
Query: 111 EYLSNNKVVHRDLATRNILLSSPHV-------------------VKISDFGLSEDIYEQN 151
+L N++ H DL NIL + ++++DFG + +E +
Sbjct: 146 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH 205
Query: 152 VFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWE 192
+ P E ++ + DVWS G +L+E
Sbjct: 206 TTIVATRHYRPP------EVILELGWAQPCDVWSIGCILFE 240
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 22/128 (17%)
Query: 111 EYLSNNKVVHRDLATRNILLSSP----------HVVKISDFGLSEDIYEQNVFQNGEPSE 160
EYL + +++H D+ N+LLSS H V + GL + + + E
Sbjct: 199 EYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETH- 257
Query: 161 KLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI---PLCRIVHYLSTGY 217
+A E ++ K DVWS ++ ++ G +P+ PLC +
Sbjct: 258 ------MAPEVVLGRSCDAKVDVWSSCCMMLHMLN-GCHPWTQFFRGPLCLKIASEPPPV 310
Query: 218 RMERPASC 225
R E P SC
Sbjct: 311 R-EIPPSC 317
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 83 FIGCCYKDELRLVVEYCALGDLQSYLREEYLSNNKVVHRDLATRNILL---SSPHVVKIS 139
F C K L+ V+ L D Q R EY+ + +HRD+ N L+ ++V I
Sbjct: 95 FNFCSRKFSLKTVL---LLAD-QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYII 150
Query: 140 DFGLSEDIYEQNVFQNGEPSEKLPI----RWLALESLVSNIYTNKSDVWSFGVVLWEIVT 195
DFGL++ + Q+ E + R+ ++ + + + + D+ S G VL
Sbjct: 151 DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM-YFN 209
Query: 196 LGANPY 201
LG+ P+
Sbjct: 210 LGSLPW 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,368,791
Number of Sequences: 62578
Number of extensions: 307428
Number of successful extensions: 3235
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 829
Number of HSP's gapped (non-prelim): 1244
length of query: 228
length of database: 14,973,337
effective HSP length: 95
effective length of query: 133
effective length of database: 9,028,427
effective search space: 1200780791
effective search space used: 1200780791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)