Query         psy3166
Match_columns 228
No_of_seqs    110 out of 1875
Neff          10.0
Searched_HMMs 29240
Date          Fri Aug 16 18:03:28 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy3166.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3166hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 2.3E-53   8E-58  342.5  17.1  217    5-228     8-258 (299)
  2 4gt4_A Tyrosine-protein kinase 100.0 5.9E-53   2E-57  341.5  18.8  218    5-228    21-275 (308)
  3 4aoj_A High affinity nerve gro 100.0 2.7E-52 9.4E-57  340.5  20.2  217    5-228    36-288 (329)
  4 4aw0_A HPDK1, 3-phosphoinositi 100.0   5E-53 1.7E-57  340.7  15.0  208    7-227    29-259 (311)
  5 4b9d_A Serine/threonine-protei 100.0   1E-52 3.5E-57  344.0  15.1  205    9-227    23-251 (350)
  6 4ase_A Vascular endothelial gr 100.0 4.9E-52 1.7E-56  341.6  15.8  219    5-228    59-316 (353)
  7 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-52 4.3E-57  338.1  11.4  210    7-228    21-252 (304)
  8 4fih_A Serine/threonine-protei 100.0   4E-51 1.4E-55  334.1  16.7  202    4-220    68-289 (346)
  9 3hyh_A Carbon catabolite-derep 100.0 8.3E-51 2.8E-55  323.3  17.5  208    3-227     6-237 (275)
 10 3omv_A RAF proto-oncogene seri 100.0 1.5E-50 5.2E-55  326.5  19.3  209    4-227    30-268 (307)
 11 4fie_A Serine/threonine-protei 100.0 3.5E-50 1.2E-54  336.0  17.5  208    4-226   145-374 (423)
 12 4g3f_A NF-kappa-beta-inducing  100.0 6.7E-50 2.3E-54  325.9  15.0  203    8-227    56-284 (336)
 13 3fpq_A Serine/threonine-protei 100.0 2.5E-48 8.5E-53  311.4  18.8  198   12-226    28-256 (290)
 14 4g31_A Eukaryotic translation  100.0 3.6E-48 1.2E-52  312.5  11.5  194   10-217     5-244 (299)
 15 4b99_A Mitogen-activated prote 100.0 7.8E-46 2.7E-50  309.4  17.8  195   10-216    54-278 (398)
 16 3v5w_A G-protein coupled recep 100.0 2.2E-45 7.5E-50  320.5  19.0  205    6-227   185-419 (689)
 17 4f9c_A Cell division cycle 7-r 100.0 3.2E-44 1.1E-48  296.6  17.9  194   10-213    21-260 (361)
 18 3uto_A Twitchin; kinase, muscl 100.0 4.7E-44 1.6E-48  311.5  18.5  191   10-216   157-371 (573)
 19 3hmm_A TGF-beta receptor type- 100.0 1.7E-44 5.7E-49  292.0  14.3  177   10-201     3-218 (303)
 20 2psq_A Fibroblast growth facto 100.0 1.2E-41 4.1E-46  282.6  20.8  220    5-227    76-332 (370)
 21 3kul_A Ephrin type-A receptor  100.0 9.1E-42 3.1E-46  278.6  17.8  216    5-227    44-281 (325)
 22 3cbl_A C-FES, proto-oncogene t 100.0 3.5E-42 1.2E-46  286.5  15.1  213    4-227   108-342 (377)
 23 3txo_A PKC-L, NPKC-ETA, protei 100.0   6E-42   2E-46  282.7  15.6  207    6-226    19-248 (353)
 24 1o6l_A RAC-beta serine/threoni 100.0 1.4E-41 4.9E-46  278.8  17.5  206    7-227     2-230 (337)
 25 3fe3_A MAP/microtubule affinit 100.0 4.2E-41 1.5E-45  275.1  20.0  204    8-227    13-239 (328)
 26 3zgw_A Maternal embryonic leuc 100.0 2.4E-41 8.1E-46  278.4  17.8  207    7-227     7-235 (347)
 27 2i0e_A Protein kinase C-beta I 100.0 2.9E-41 9.9E-46  278.5  17.4  208    6-227    16-246 (353)
 28 1xjd_A Protein kinase C, theta 100.0 3.6E-41 1.2E-45  277.2  17.8  208    6-227    13-243 (345)
 29 1mp8_A Focal adhesion kinase 1 100.0   5E-41 1.7E-45  268.6  18.0  215    4-227     9-244 (281)
 30 3l9p_A Anaplastic lymphoma kin 100.0 2.3E-41   8E-46  280.6  16.6  217    5-227    66-313 (367)
 31 4dc2_A Protein kinase C IOTA t 100.0 4.9E-41 1.7E-45  280.8  18.1  210    4-227    46-287 (396)
 32 1qcf_A Haematopoetic cell kina 100.0 2.5E-41 8.6E-46  287.7  16.4  210    4-228   182-413 (454)
 33 1fot_A TPK1 delta, CAMP-depend 100.0 3.6E-41 1.2E-45  274.4  16.5  203    6-226     2-227 (318)
 34 3tt0_A Basic fibroblast growth 100.0 3.4E-40 1.2E-44  274.9  21.6  221    4-227    63-320 (382)
 35 2ozo_A Tyrosine-protein kinase 100.0 7.5E-41 2.6E-45  294.0  17.8  216    5-228   330-567 (613)
 36 3a8x_A Protein kinase C IOTA t 100.0 3.1E-40 1.1E-44  271.7  20.3  208    6-227     5-244 (345)
 37 2qol_A Ephrin receptor; recept 100.0 7.5E-41 2.6E-45  278.1  16.1  217    4-227    39-277 (373)
 38 3cc6_A Protein tyrosine kinase 100.0 3.3E-40 1.1E-44  263.7  19.2  215    4-227     6-241 (281)
 39 3a62_A Ribosomal protein S6 ki 100.0 3.3E-40 1.1E-44  269.6  19.2  212    4-227    11-246 (327)
 40 1rdq_E PKA C-alpha, CAMP-depen 100.0   1E-40 3.5E-45  275.1  15.9  203    7-227    38-263 (350)
 41 1luf_A Muscle-specific tyrosin 100.0 3.6E-40 1.2E-44  270.4  18.8  218    4-227    41-303 (343)
 42 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.1E-40 3.9E-45  283.5  16.4  209    4-227   178-408 (452)
 43 2r5t_A Serine/threonine-protei 100.0 2.1E-40 7.3E-45  275.2  17.1  206    6-226    34-263 (373)
 44 1mqb_A Ephrin type-A receptor  100.0 6.9E-40 2.4E-44  268.3  19.8  218    4-227    38-277 (333)
 45 3p86_A Serine/threonine-protei 100.0 5.4E-40 1.9E-44  266.4  18.7  208    4-227    31-266 (309)
 46 1u59_A Tyrosine-protein kinase 100.0 3.7E-40 1.3E-44  264.3  17.4  216    4-227     3-240 (287)
 47 1k9a_A Carboxyl-terminal SRC k 100.0 2.1E-40 7.3E-45  281.6  16.8  204    4-228   187-414 (450)
 48 3poz_A Epidermal growth factor 100.0 2.8E-40 9.6E-45  270.0  16.7  214    7-227    12-246 (327)
 49 3v8s_A RHO-associated protein  100.0 4.7E-41 1.6E-45  282.1  12.3  198    6-216    65-288 (410)
 50 3vhe_A Vascular endothelial gr 100.0 2.1E-40 7.3E-45  273.4  15.5  220    3-227    15-323 (359)
 51 1opk_A P150, C-ABL, proto-onco 100.0 1.9E-40 6.4E-45  285.0  15.3  210    4-227   214-446 (495)
 52 2ivs_A Proto-oncogene tyrosine 100.0 9.4E-40 3.2E-44  264.7  18.6  218    4-227    17-279 (314)
 53 3fxz_A Serine/threonine-protei 100.0 7.9E-40 2.7E-44  264.0  17.9  198    4-216    14-231 (297)
 54 3ugc_A Tyrosine-protein kinase 100.0 8.7E-40   3E-44  263.1  18.1  216    4-227     4-259 (295)
 55 3kex_A Receptor tyrosine-prote 100.0   4E-40 1.4E-44  268.7  16.2  217    5-228     8-245 (325)
 56 4fl3_A Tyrosine-protein kinase 100.0 3.7E-40 1.3E-44  290.4  17.0  214    6-227   364-599 (635)
 57 2pvf_A Fibroblast growth facto 100.0 2.3E-39 7.9E-44  265.1  19.7  221    4-227    29-286 (334)
 58 4aw2_A Serine/threonine-protei 100.0 2.9E-40 9.8E-45  279.4  14.3  197    6-215    70-295 (437)
 59 4hcu_A Tyrosine-protein kinase 100.0 1.1E-39 3.9E-44  259.1  16.9  209    4-227     4-234 (269)
 60 4eqm_A Protein kinase; transfe 100.0 1.6E-39 5.5E-44  261.7  17.9  199    8-219     9-230 (294)
 61 4fr4_A YANK1, serine/threonine 100.0 8.2E-40 2.8E-44  272.4  16.6  206    5-226    10-244 (384)
 62 2vd5_A DMPK protein; serine/th 100.0 3.3E-40 1.1E-44  277.2  14.4  197    6-215    57-284 (412)
 63 2h8h_A Proto-oncogene tyrosine 100.0 4.2E-40 1.4E-44  285.3  15.2  209    4-227   261-491 (535)
 64 1p4o_A Insulin-like growth fac 100.0 2.4E-39 8.1E-44  263.4  18.5  219    3-227    18-267 (322)
 65 1xbb_A Tyrosine-protein kinase 100.0 1.1E-39 3.8E-44  262.0  16.2  215    5-227    11-247 (291)
 66 2yab_A Death-associated protei 100.0 3.5E-39 1.2E-43  266.8  19.6  193    9-216    11-233 (361)
 67 3pfq_A PKC-B, PKC-beta, protei 100.0 6.7E-40 2.3E-44  290.6  15.7  208    6-227   337-567 (674)
 68 3lzb_A Epidermal growth factor 100.0 1.9E-39 6.7E-44  265.1  17.1  214    7-227    12-246 (327)
 69 4ejn_A RAC-alpha serine/threon 100.0 7.8E-40 2.7E-44  277.9  14.9  207    6-227   144-374 (446)
 70 1qpc_A LCK kinase; alpha beta  100.0 2.8E-39 9.4E-44  258.1  16.5  211    2-227     5-237 (279)
 71 3gen_A Tyrosine-protein kinase 100.0 2.8E-39 9.7E-44  258.5  16.5  209    4-227    18-248 (283)
 72 3soa_A Calcium/calmodulin-depe 100.0 9.5E-39 3.2E-43  270.8  20.4  194   10-217    11-229 (444)
 73 2bdw_A Hypothetical protein K1 100.0 9.2E-39 3.1E-43  264.5  19.9  192   10-216    29-245 (362)
 74 1rjb_A FL cytokine receptor; k 100.0 2.1E-39 7.2E-44  266.1  15.8  220    3-227    38-302 (344)
 75 2j0j_A Focal adhesion kinase 1 100.0 6.9E-39 2.4E-43  283.3  19.3  214    5-227   385-619 (656)
 76 3qup_A Tyrosine-protein kinase 100.0 6.8E-39 2.3E-43  260.9  17.5  215    5-227    18-266 (323)
 77 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.4E-39 1.2E-43  278.7  16.6  208    5-227   180-418 (543)
 78 3lb7_A RAF proto-oncogene seri 100.0 2.1E-38   7E-43  256.9  20.2  202    4-220    30-257 (307)
 79 3sxs_A Cytoplasmic tyrosine-pr 100.0 7.6E-39 2.6E-43  254.1  17.1  208    5-227     3-232 (268)
 80 1t46_A HOMO sapiens V-KIT hard 100.0   1E-38 3.5E-43  258.5  17.9  219    4-227    17-275 (313)
 81 3ork_A Serine/threonine protei 100.0 4.6E-39 1.6E-43  260.9  15.4  200    6-216     8-234 (311)
 82 3c1x_A Hepatocyte growth facto 100.0 2.5E-39 8.5E-44  268.9  14.1  210   11-227    90-323 (373)
 83 2xir_A Vascular endothelial gr 100.0 7.7E-39 2.6E-43  259.5  15.8  219    4-227    21-278 (316)
 84 3f66_A Hepatocyte growth facto 100.0 1.9E-38 6.6E-43  255.4  17.8  213    8-227    23-259 (298)
 85 2i1m_A Macrophage colony-stimu 100.0 1.2E-38   4E-43  260.6  16.6  219    4-227    40-294 (333)
 86 3kmu_A ILK, integrin-linked ki 100.0 2.7E-38 9.1E-43  250.8  18.0  206    1-227     1-238 (271)
 87 1tki_A Titin; serine kinase, m 100.0 1.2E-38   4E-43  259.8  16.3  193    9-218     4-220 (321)
 88 2yfx_A Tyrosine-protein kinase 100.0   1E-38 3.5E-43  260.5  15.9  216    6-227    26-272 (327)
 89 3kfa_A Tyrosine-protein kinase 100.0 6.9E-39 2.4E-43  256.7  14.5  210    4-227     7-239 (288)
 90 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.3E-39 4.4E-44  267.0  10.0  202    8-226     7-232 (336)
 91 3s95_A LIMK-1, LIM domain kina 100.0 7.4E-39 2.5E-43  259.4  14.4  187    6-204     6-225 (310)
 92 3t9t_A Tyrosine-protein kinase 100.0 2.4E-38 8.1E-43  250.9  16.7  209    4-227     2-232 (267)
 93 3lxp_A Non-receptor tyrosine-p 100.0 1.2E-38   4E-43  259.4  15.2  214    7-227    28-278 (318)
 94 3brb_A Proto-oncogene tyrosine 100.0 5.4E-38 1.8E-42  254.6  19.0  214    6-227    30-276 (313)
 95 2acx_A G protein-coupled recep 100.0 8.7E-39   3E-43  277.2  15.1  206    6-227   180-414 (576)
 96 4e5w_A Tyrosine-protein kinase 100.0 1.4E-38 4.7E-43  256.7  15.1  215    6-227    17-270 (302)
 97 3pls_A Macrophage-stimulating  100.0   1E-37 3.6E-42  250.9  20.1  210   11-227    22-255 (298)
 98 2pmi_A Negative RE, cyclin-dep 100.0 1.8E-38 6.1E-43  258.2  15.6  193    8-215     3-223 (317)
 99 2y0a_A Death-associated protei 100.0 5.3E-38 1.8E-42  256.5  18.3  193    9-216    10-232 (326)
100 3oz6_A Mitogen-activated prote 100.0 2.5E-38 8.6E-43  264.0  16.7  195   10-215     9-245 (388)
101 2y94_A 5'-AMP-activated protei 100.0 1.4E-38 4.9E-43  271.6  15.3  205    7-227    13-241 (476)
102 3gni_B Strad alpha; kinase fol 100.0 6.5E-38 2.2E-42  261.6  18.5  201    4-215    19-251 (389)
103 3a7i_A MST3 kinase, serine/thr 100.0 7.3E-38 2.5E-42  252.7  17.8  207    7-227    19-245 (303)
104 3ttj_A Mitogen-activated prote 100.0 2.6E-38 8.8E-43  269.7  15.8  191   10-216    62-278 (464)
105 3tki_A Serine/threonine-protei 100.0 8.5E-39 2.9E-43  260.9  12.2  187    9-207     6-214 (323)
106 3lxl_A Tyrosine-protein kinase 100.0 4.3E-38 1.5E-42  256.8  16.4  213    7-227    20-271 (327)
107 1kob_A Twitchin; kinase, intra 100.0 1.2E-37 3.9E-42  259.9  19.0  192    9-216    50-265 (387)
108 3niz_A Rhodanese family protei 100.0 6.5E-38 2.2E-42  254.3  16.7  191    9-215    20-234 (311)
109 1byg_A CSK, protein (C-termina 100.0   4E-38 1.4E-42  251.3  15.2  203    4-227    15-241 (278)
110 3c0i_A Peripheral plasma membr 100.0 5.1E-38 1.7E-42  259.0  16.2  192   10-216    24-247 (351)
111 1u46_A ACK-1, activated CDC42  100.0 3.4E-38 1.2E-42  252.9  14.5  216    5-227    13-252 (291)
112 1fvr_A Tyrosine-protein kinase 100.0 2.2E-38 7.5E-43  258.5  13.2  212    5-227    20-268 (327)
113 2eue_A Carbon catabolite derep 100.0   6E-38   2E-42  249.9  15.5  207    4-227     7-237 (275)
114 3og7_A AKAP9-BRAF fusion prote 100.0 1.5E-37 5.1E-42  249.5  17.7  202    4-220    18-245 (289)
115 3fdn_A Serine/threonine-protei 100.0 9.2E-38 3.1E-42  249.3  16.3  204    6-226     5-231 (279)
116 4euu_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42  256.7  13.8  198    6-218     5-244 (319)
117 2rku_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41  247.0  20.4  205    7-226    12-239 (294)
118 3o0g_A Cell division protein k 100.0   2E-37 6.9E-42  249.0  18.1  191   10-215     2-217 (292)
119 3uc3_A Serine/threonine-protei 100.0 1.2E-37   4E-42  257.8  17.2  186    4-206    14-223 (361)
120 2owb_A Serine/threonine-protei 100.0 3.6E-37 1.2E-41  252.3  19.6  205    7-226    38-265 (335)
121 2c30_A Serine/threonine-protei 100.0 2.6E-37 8.8E-42  251.9  18.5  196   10-220    45-260 (321)
122 2zv2_A Calcium/calmodulin-depe 100.0 7.7E-38 2.6E-42  252.1  14.6  196    7-216    10-255 (298)
123 1ua2_A CAK, cell division prot 100.0   2E-37 6.9E-42  254.9  17.1  200    1-215     1-227 (346)
124 3mtl_A Cell division protein k 100.0   3E-38   1E-42  257.6  11.8  196   10-220     2-220 (324)
125 2eva_A TAK1 kinase - TAB1 chim 100.0 2.3E-37 7.8E-42  250.6  16.8  199    6-227     4-231 (307)
126 2vgo_A Serine/threonine-protei 100.0 3.5E-37 1.2E-41  246.6  17.6  204    6-226    10-236 (284)
127 3kk8_A Calcium/calmodulin depe 100.0 1.4E-36 4.9E-41  242.8  21.2  193    9-216     5-222 (284)
128 3qd2_B Eukaryotic translation  100.0 1.1E-37 3.9E-42  254.0  14.9  181   10-201     6-276 (332)
129 2w5a_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42  249.7  13.5  206    8-227     4-242 (279)
130 4f0f_A Serine/threonine-protei 100.0 3.1E-37 1.1E-41  247.1  16.8  204    6-227    15-257 (287)
131 3qyz_A Mitogen-activated prote 100.0 4.6E-37 1.6E-41  254.4  18.3  194   10-215    27-246 (364)
132 1ob3_A PFPK5, cell division co 100.0 1.5E-37 5.1E-42  249.4  14.9  190   10-215     2-215 (288)
133 3q5i_A Protein kinase; CDPK, m 100.0 3.5E-37 1.2E-41  265.3  18.1  193    9-217    35-263 (504)
134 2izr_A Casein kinase I isoform 100.0 1.4E-37 4.6E-42  254.2  14.7  186    7-206     6-222 (330)
135 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.7E-37 5.8E-42  253.7  15.2  197    4-215    28-252 (329)
136 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-37 4.1E-42  256.0  14.4  190   10-217    22-239 (342)
137 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.4E-37 8.3E-42  256.1  16.3  188    6-203    61-287 (365)
138 3dtc_A Mitogen-activated prote 100.0 2.5E-37 8.6E-42  245.6  15.7  204    6-227     3-241 (271)
139 2vwi_A Serine/threonine-protei 100.0 8.6E-38 2.9E-42  251.8  13.1  207    2-219     7-245 (303)
140 2a2a_A Death-associated protei 100.0   6E-37   2E-41  249.5  18.1  192   10-216    12-233 (321)
141 3f3z_A Calcium/calmodulin-depe 100.0 3.4E-37 1.2E-41  245.7  16.3  192    9-217     8-223 (277)
142 2xrw_A Mitogen-activated prote 100.0 4.8E-37 1.6E-41  254.9  17.8  197    9-221    24-246 (371)
143 3llt_A Serine/threonine kinase 100.0   1E-36 3.4E-41  251.7  19.4  189    9-216    34-274 (360)
144 2x4f_A Myosin light chain kina 100.0 4.8E-37 1.6E-41  255.2  17.5  190   11-216    88-303 (373)
145 2h34_A Serine/threonine-protei 100.0 8.5E-37 2.9E-41  247.4  18.6  209    6-227    30-263 (309)
146 1u5q_A Serine/threonine protei 100.0 9.2E-37 3.1E-41  251.3  19.0  198   10-226    54-279 (348)
147 2w4o_A Calcium/calmodulin-depe 100.0 4.3E-37 1.5E-41  253.3  17.0  191   10-218    53-268 (349)
148 3is5_A Calcium-dependent prote 100.0 7.8E-37 2.7E-41  244.9  17.8  191   10-216    22-240 (285)
149 3mwu_A Calmodulin-domain prote 100.0 4.2E-37 1.4E-41  263.7  17.1  193    9-217    21-238 (486)
150 3g33_A Cell division protein k 100.0 2.9E-37 9.8E-42  249.9  15.1  195    7-216     6-234 (308)
151 1nxk_A MAP kinase-activated pr 100.0 3.8E-37 1.3E-41  258.0  16.4  178    9-206    60-268 (400)
152 1cm8_A Phosphorylated MAP kina 100.0 4.3E-37 1.5E-41  255.0  16.2  189    9-215    24-240 (367)
153 3hko_A Calcium/calmodulin-depe 100.0 6.2E-37 2.1E-41  251.4  16.7  196   10-216    26-291 (345)
154 3lij_A Calcium/calmodulin depe 100.0 5.6E-37 1.9E-41  263.4  17.1  193   10-218    37-254 (494)
155 1vzo_A Ribosomal protein S6 ki 100.0 1.1E-37 3.9E-42  257.3  12.2  210    7-226    51-290 (355)
156 3eqc_A Dual specificity mitoge 100.0 6.3E-37 2.2E-41  253.0  16.5  190    6-211    29-240 (360)
157 2w1i_A JAK2; chromosomal rearr 100.0   4E-37 1.4E-41  251.0  15.1  214    6-227    37-290 (326)
158 3soc_A Activin receptor type-2 100.0 4.1E-37 1.4E-41  250.7  15.1  183    6-204    20-241 (322)
159 4agu_A Cyclin-dependent kinase 100.0 1.2E-36 4.1E-41  246.4  17.4  191   10-214     3-216 (311)
160 3fme_A Dual specificity mitoge 100.0 1.1E-36 3.7E-41  244.1  16.9  207    4-226     1-240 (290)
161 3kn6_A Ribosomal protein S6 ki 100.0 8.4E-37 2.9E-41  249.3  16.3  190   10-216     8-231 (325)
162 4fvq_A Tyrosine-protein kinase 100.0 9.1E-37 3.1E-41  244.5  15.7  209    5-226     3-242 (289)
163 2jam_A Calcium/calmodulin-depe 100.0 2.2E-36 7.6E-41  244.2  17.8  192    9-217     8-223 (304)
164 2zmd_A Dual specificity protei 100.0 2.1E-36 7.3E-41  252.7  18.2  204    8-225    54-293 (390)
165 3nyv_A Calmodulin-domain prote 100.0 5.9E-37   2E-41  262.6  15.1  193    9-217    25-243 (484)
166 2h6d_A 5'-AMP-activated protei 100.0 1.1E-36 3.7E-41  242.5  15.5  204    7-226     8-235 (276)
167 3cok_A Serine/threonine-protei 100.0 2.5E-37 8.4E-42  246.6  11.7  206    6-226     7-236 (278)
168 3mi9_A Cell division protein k 100.0 1.8E-36 6.1E-41  249.5  16.9  197    7-215    14-243 (351)
169 3eb0_A Putative uncharacterize 100.0 1.4E-36 4.7E-41  253.2  15.7  188    6-214     3-255 (383)
170 3dbq_A Dual specificity protei 100.0 2.2E-36 7.7E-41  248.4  16.5  207    6-226     5-247 (343)
171 3byv_A Rhoptry kinase; malaria 100.0 4.8E-38 1.6E-42  261.5   6.4  186    3-206    66-318 (377)
172 4eut_A Serine/threonine-protei 100.0   3E-37   1E-41  258.3  11.0  198    7-219     6-245 (396)
173 3bhy_A Death-associated protei 100.0 5.5E-36 1.9E-40  239.3  17.9  192   10-216     5-226 (283)
174 3i6u_A CDS1, serine/threonine- 100.0 3.7E-37 1.3E-41  259.5  11.5  194    9-217   134-361 (419)
175 1t4h_A Serine/threonine-protei 100.0 1.7E-35 5.8E-40  237.4  20.4  197    6-219    22-248 (290)
176 2wqm_A Serine/threonine-protei 100.0   8E-36 2.8E-40  241.5  18.6  205    8-226    30-264 (310)
177 3op5_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41  251.7  14.2  191    7-204    32-264 (364)
178 1phk_A Phosphorylase kinase; g 100.0   2E-35 6.9E-40  237.6  20.7  196    8-217    15-245 (298)
179 4aaa_A Cyclin-dependent kinase 100.0 2.3E-36 7.8E-41  247.0  15.3  194    7-214    22-238 (331)
180 2x7f_A TRAF2 and NCK-interacti 100.0 8.2E-36 2.8E-40  242.9  18.5  198    6-218    20-251 (326)
181 1x8b_A WEE1HU, WEE1-like prote 100.0 4.7E-36 1.6E-40  239.7  16.7  198   10-227    11-254 (289)
182 3lm5_A Serine/threonine-protei 100.0 1.7E-36   6E-41  247.5  14.5  193   10-216    28-248 (327)
183 2ac3_A MAP kinase-interacting  100.0 2.9E-36   1E-40  244.6  15.7  186    9-205    11-230 (316)
184 1csn_A Casein kinase-1; phosph 100.0 5.3E-36 1.8E-40  240.9  16.5  186    6-205     6-222 (298)
185 2fst_X Mitogen-activated prote 100.0 1.6E-36 5.4E-41  251.6  13.4  188   10-215    29-244 (367)
186 2y7j_A Phosphorylase B kinase  100.0 1.9E-35 6.6E-40  244.8  19.8  194   10-217    94-321 (365)
187 3com_A Serine/threonine-protei 100.0 1.5E-35 5.1E-40  240.2  18.7  194    7-217    26-241 (314)
188 3kvw_A DYRK2, dual specificity 100.0 7.5E-36 2.5E-40  252.3  16.9  189    9-216    96-314 (429)
189 3n9x_A Phosphotransferase; mal 100.0 6.1E-36 2.1E-40  253.0  16.4  181    9-201    25-252 (432)
190 2j7t_A Serine/threonine-protei 100.0 5.2E-36 1.8E-40  241.5  15.1  198    7-219    16-240 (302)
191 3an0_A Dual specificity mitoge 100.0 1.4E-35 4.9E-40  243.0  17.8  202    5-222    46-279 (340)
192 2wtk_C Serine/threonine-protei 100.0   8E-36 2.7E-40  240.8  16.0  204   10-227     5-238 (305)
193 2b9h_A MAP kinase FUS3, mitoge 100.0 1.7E-35 5.8E-40  243.5  18.0  193    9-213    10-235 (353)
194 2yex_A Serine/threonine-protei 100.0 5.8E-36   2E-40  238.2  14.6  186   10-207     7-214 (276)
195 3rp9_A Mitogen-activated prote 100.0 4.5E-36 1.5E-40  255.5  14.7  176    9-195    52-279 (458)
196 2r3i_A Cell division protein k 100.0 1.2E-35 4.2E-40  239.0  16.5  192    9-215     2-218 (299)
197 3p1a_A MYT1 kinase, membrane-a 100.0 1.7E-35   6E-40  240.0  17.2  178   10-203    57-257 (311)
198 2i6l_A Mitogen-activated prote 100.0 1.1E-35 3.6E-40  241.2  15.9  195    9-216    10-240 (320)
199 3nsz_A CK II alpha, casein kin 100.0 3.4E-35 1.2E-39  239.6  18.9  177    9-203    35-233 (330)
200 3uim_A Brassinosteroid insensi 100.0 1.6E-36 5.3E-41  247.3  10.7  182    7-202    27-236 (326)
201 4exu_A Mitogen-activated prote 100.0 1.4E-35 4.8E-40  246.1  16.1  188   10-215    42-256 (371)
202 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.8E-36 6.1E-41  246.1   9.9  210    3-227    26-270 (319)
203 1j1b_A Glycogen synthase kinas 100.0   2E-35 6.7E-40  249.1  16.3  184   10-214    54-270 (420)
204 2v62_A Serine/threonine-protei 100.0 3.1E-36 1.1E-40  247.7  11.0  188    7-203    34-262 (345)
205 3dls_A PAS domain-containing s 100.0 1.4E-36 4.8E-41  248.9   8.9  181    9-204    23-233 (335)
206 2clq_A Mitogen-activated prote 100.0 9.9E-36 3.4E-40  239.0  13.7  204    9-227    21-253 (295)
207 3aln_A Dual specificity mitoge 100.0 2.1E-35 7.2E-40  240.8  15.7  186    4-205    16-233 (327)
208 3ll6_A Cyclin G-associated kin 100.0 2.2E-35 7.5E-40  240.9  15.4  190    6-207    24-259 (337)
209 3g2f_A Bone morphogenetic prot 100.0 1.7E-35 5.7E-40  242.1  14.4  183    2-201     5-235 (336)
210 2ycf_A Serine/threonine-protei 100.0 2.9E-36 9.9E-41  245.5   9.8  193    9-216     9-235 (322)
211 2qkw_B Protein kinase; three-h 100.0 3.6E-36 1.2E-40  244.8  10.3  186    7-206    36-246 (321)
212 2vx3_A Dual specificity tyrosi 100.0 9.4E-35 3.2E-39  242.0  18.8  188    9-215    53-272 (382)
213 2buj_A Serine/threonine-protei 100.0 4.4E-36 1.5E-40  243.6  10.4  209    6-226    25-273 (317)
214 3q60_A ROP5B; pseudokinase, tr 100.0 8.1E-36 2.8E-40  247.5  12.1  185    4-205    56-297 (371)
215 3q4u_A Activin receptor type-1 100.0 6.2E-35 2.1E-39  235.0  15.7  182    6-204     4-236 (301)
216 4e7w_A Glycogen synthase kinas 100.0 4.5E-35 1.5E-39  245.0  15.0  185   10-215    40-256 (394)
217 1z57_A Dual specificity protei 100.0 2.4E-34 8.1E-39  234.9  18.8  188    9-215    13-248 (339)
218 1blx_A Cyclin-dependent kinase 100.0 4.2E-35 1.5E-39  238.6  14.3  193    9-215    10-233 (326)
219 2wei_A Calmodulin-domain prote 100.0 7.8E-35 2.7E-39  233.3  15.6  193    9-217    21-238 (287)
220 3uzp_A CKI-delta, CKID, casein 100.0 4.4E-35 1.5E-39  235.4  14.2  181    9-204     8-218 (296)
221 3coi_A Mitogen-activated prote 100.0 5.7E-35 1.9E-39  240.8  15.0  188    9-214    23-237 (353)
222 3rgf_A Cyclin-dependent kinase 100.0 5.2E-35 1.8E-39  245.3  14.7  184   10-206    20-241 (405)
223 3e3p_A Protein kinase, putativ 100.0 8.1E-35 2.8E-39  240.1  15.4  190    8-215    21-246 (360)
224 4hgt_A Casein kinase I isoform 100.0 1.2E-34 4.1E-39  232.7  15.4  182    9-205     8-219 (296)
225 1zy4_A Serine/threonine-protei 100.0 1.9E-34 6.4E-39  232.0  16.5  191   10-216     6-244 (303)
226 3pg1_A Mitogen-activated prote 100.0 9.2E-35 3.2E-39  240.1  15.1  192    7-215    19-248 (362)
227 1wak_A Serine/threonine-protei 100.0 1.2E-34 4.2E-39  241.6  15.6  178    9-205    36-297 (397)
228 2pml_X PFPK7, Ser/Thr protein  100.0   1E-35 3.6E-40  244.4   8.3  196    8-222    29-273 (348)
229 3sv0_A Casein kinase I-like; t 100.0 1.4E-34 4.6E-39  247.4  15.0  184    9-206     6-218 (483)
230 2eu9_A Dual specificity protei 100.0 7.3E-34 2.5E-38  233.5  18.5  188    9-215    18-253 (355)
231 2jii_A Serine/threonine-protei 100.0 8.3E-35 2.8E-39  239.7  12.8  188    8-205    40-272 (352)
232 3cek_A Dual specificity protei 100.0 2.6E-34 8.8E-39  233.0  15.4  207    6-226    24-266 (313)
233 2dyl_A Dual specificity mitoge 100.0 3.8E-34 1.3E-38  232.1  15.8  201    6-222    21-251 (318)
234 2a19_B Interferon-induced, dou 100.0 1.1E-34 3.8E-39  231.6  12.3  174   10-203    11-223 (284)
235 3gxj_A TGF-beta receptor type- 100.0 1.4E-35 4.8E-40  238.9   6.7  179   10-204     3-231 (303)
236 2nru_A Interleukin-1 receptor- 100.0 1.8E-34 6.1E-39  233.1  12.3  181   11-206    32-239 (307)
237 3mdy_A Bone morphogenetic prot 100.0 7.4E-34 2.5E-38  232.1  15.1  180    9-204    36-265 (337)
238 1q8y_A SR protein kinase; tran 100.0 8.6E-34 2.9E-38  234.9  14.4  180    7-205    16-239 (373)
239 1b6c_B TGF-B superfamily recep 100.0 1.9E-33 6.3E-38  230.3  16.2  179   10-204    42-270 (342)
240 3qa8_A MGC80376 protein; kinas 100.0 4.4E-34 1.5E-38  250.6  13.2  184    6-204    10-226 (676)
241 3fhr_A MAP kinase-activated pr 100.0 8.4E-34 2.9E-38  232.5  13.2  180    9-209    27-237 (336)
242 2rio_A Serine/threonine-protei 100.0 3.3E-33 1.1E-37  236.4  17.1  183   10-207    15-246 (434)
243 3p23_A Serine/threonine-protei 100.0 1.8E-33 6.1E-38  237.8  14.8  186    7-207    21-236 (432)
244 2pzi_A Probable serine/threoni 100.0 5.5E-34 1.9E-38  253.4  11.8  176    9-203    79-278 (681)
245 3uqc_A Probable conserved tran 100.0 3.8E-33 1.3E-37  223.8  15.2  156   10-206    31-207 (286)
246 3a99_A Proto-oncogene serine/t 100.0 6.3E-34 2.1E-38  231.7   9.6  183    7-204    40-252 (320)
247 2iwi_A Serine/threonine-protei 100.0 1.7E-33 5.7E-38  228.1   9.7  181    8-203    29-241 (312)
248 3dzo_A Rhoptry kinase domain;  100.0 1.3E-32 4.5E-37  231.4  11.3  185    5-208    73-324 (413)
249 2vuw_A Serine/threonine-protei 100.0 1.2E-33   4E-38  231.4   4.5  176    7-203    17-279 (336)
250 3m2w_A MAP kinase-activated pr 100.0 2.8E-31 9.4E-36  214.0  15.0  160    6-206    13-203 (299)
251 4azs_A Methyltransferase WBDD; 100.0 8.9E-31   3E-35  227.9  -0.2  152   40-195   255-433 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 2.2E-26 7.4E-31  199.3   2.0  174   14-202   340-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 1.6E-23 5.5E-28  167.4   5.4  117   13-145    93-240 (282)
254 1zth_A RIO1 serine protein kin  99.8   1E-18 3.5E-23  137.8   9.0  121   11-146    48-218 (258)
255 4gyi_A RIO2 kinase; protein ki  99.6 2.1E-16 7.3E-21  130.4   3.2  122   11-144    96-262 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.0 2.9E-10 9.8E-15   89.2   6.0  124   10-145    14-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  98.9 3.8E-09 1.3E-13   82.3   7.8  121   11-145    21-213 (264)
258 3dxp_A Putative acyl-COA dehyd  98.6 6.5E-08 2.2E-12   79.3   7.9   80   14-104    42-128 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.1 3.1E-06 1.1E-10   67.6   4.6   74   15-105    25-104 (304)
260 4gkh_A Aminoglycoside 3'-phosp  97.9 0.00017 5.8E-09   56.2  11.4   78   17-107    31-110 (272)
261 3r70_A Aminoglycoside phosphot  97.8 8.5E-05 2.9E-09   59.7   9.2   72   14-105    41-115 (320)
262 3d1u_A Putative fructosamine-3  97.8 6.2E-05 2.1E-09   59.7   8.2   79   12-104    17-97  (288)
263 2olc_A MTR kinase, methylthior  97.5 0.00018 6.1E-09   59.5   7.1   78   14-101    34-119 (397)
264 3f7w_A Putative fructosamine-3  97.3 0.00083 2.8E-08   52.9   7.6   80   10-103    15-96  (288)
265 3tdw_A Gentamicin resistance p  97.2  0.0038 1.3E-07   49.7  11.3   75   15-106    24-102 (306)
266 3ovc_A Hygromycin-B 4-O-kinase  97.0   0.004 1.4E-07   50.9   9.7   75   13-104    44-121 (362)
267 2pyw_A Uncharacterized protein  96.6  0.0072 2.5E-07   50.2   8.0   30  115-145   231-260 (420)
268 3jr1_A Putative fructosamine-3  96.5  0.0075 2.6E-07   48.2   7.4   75   14-103    40-117 (312)
269 3ats_A Putative uncharacterize  96.1  0.0025 8.7E-08   51.6   2.6   89   12-103    22-119 (357)
270 3feg_A Choline/ethanolamine ki  95.0   0.053 1.8E-06   44.5   6.8   89    7-103    48-136 (379)
271 3dxq_A Choline/ethanolamine ki  94.5   0.036 1.2E-06   43.7   4.4   75   12-104    20-95  (301)
272 2q83_A YTAA protein; 2635576,   92.3   0.062 2.1E-06   42.8   2.4   31  115-145   221-251 (346)
273 2ppq_A HSK, HK, homoserine kin  88.9    0.12 4.3E-06   40.8   1.2   30  116-145   187-216 (322)
274 3csv_A Aminoglycoside phosphot  87.0    0.25 8.7E-06   39.3   1.9   30  116-145   183-216 (333)
275 3cxl_A N-chimerin; SH2, RHO-GA  86.0   0.079 2.7E-06   44.7  -1.6   63   13-88    145-214 (463)
276 3c5i_A Choline kinase; choline  85.4    0.35 1.2E-05   39.1   2.1   89    7-102    31-119 (369)
277 1zyl_A Hypothetical protein YI  83.9    0.45 1.6E-05   37.6   2.0   28  116-145   195-222 (328)
278 2qg7_A Ethanolamine kinase PV0  83.8     0.5 1.7E-05   39.8   2.3   73   15-101   113-185 (458)
279 1nw1_A Choline kinase (49.2 KD  83.6    0.38 1.3E-05   40.0   1.5   79   15-101    78-156 (429)
280 3f2s_A CK, chetk-alpha, cholin  82.6    0.57 1.9E-05   38.7   2.1   29  117-145   245-279 (401)
281 3g15_A CK, chetk-alpha, cholin  81.6    0.66 2.3E-05   38.1   2.2   28  118-145   246-279 (401)
282 3i1a_A Spectinomycin phosphotr  80.9    0.52 1.8E-05   37.8   1.3   29  117-145   207-235 (339)
283 3mes_A Choline kinase; malaria  74.5     1.3 4.4E-05   36.8   1.9   28  117-145   263-290 (424)
284 4ano_A ESSB; membrane protein,  62.7      22 0.00076   26.5   6.3   32  114-145   101-132 (219)
285 4ann_A ESSB; membrane protein,  51.0      17 0.00058   27.1   3.9   29  116-144    98-126 (215)
286 2q83_A YTAA protein; 2635576,   50.7      45  0.0016   25.7   6.8   73   16-104    38-118 (346)
287 2ppq_A HSK, HK, homoserine kin  48.8      32  0.0011   26.5   5.6   77   13-103    25-109 (322)
288 1nw1_A Choline kinase (49.2 KD  43.3      30   0.001   28.5   4.7   29  117-145   250-306 (429)
289 2yle_A Protein spire homolog 1  36.8      70  0.0024   24.0   5.4   62  123-201    76-137 (229)
290 2qg7_A Ethanolamine kinase PV0  32.2      38  0.0013   28.2   3.7   15  117-131   291-305 (458)
291 3c5i_A Choline kinase; choline  26.8      40  0.0014   26.7   2.8   28  117-145   213-240 (369)
292 2x6h_A GH13170P, VPS34, phosph  26.4      41  0.0014   29.8   3.0   25  121-145   551-575 (696)
293 3oja_A Leucine-rich immune mol  25.8     3.5 0.00012   34.7  -3.8   28   61-89    323-350 (487)
294 3mes_A Choline kinase; malaria  20.6      69  0.0024   26.4   3.1   88    9-104    70-157 (424)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=2.3e-53  Score=342.51  Aligned_cols=217  Identities=37%  Similarity=0.683  Sum_probs=184.1

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      +.|+.++|++.+.||+|+||+||+|++.+..    ...++..||||.++.. .....+.+.+|+++|+++ +||||++++
T Consensus         8 ~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~----~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l-~HpnIV~l~   81 (299)
T 4asz_A            8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLC----PEQDKILVAVKTLKDA-SDNARKDFHREAELLTNL-QHEHIVKFY   81 (299)
T ss_dssp             CBCCGGGEEEEEEEEC--CCCEEEEEECSCC--------CEEEEEEEECSC-CHHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred             cccCHHHeEEeeEEeeCCCcEEEEEEECCcc----cCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhC-CCCCCccEE
Confidence            4689999999999999999999999876532    3346678999999754 445567899999999999 999999999


Q ss_pred             eEEEcC-ceEEEEecCCCCcHHHHHHH---------------------------------hcccCCCCcccCCCCCCEee
Q psy3166          85 GCCYKD-ELRLVVEYCALGDLQSYLRE---------------------------------EYLSNNKVVHRDLATRNILL  130 (228)
Q Consensus        85 ~~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------------------~~lh~~~i~H~~lk~~nil~  130 (228)
                      +++..+ .+++||||+++|+|.+++..                                 .|||+++|+||||||+|||+
T Consensus        82 g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl  161 (299)
T 4asz_A           82 GVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV  161 (299)
T ss_dssp             EEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             EEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE
Confidence            998764 58999999999999998842                                 59999999999999999999


Q ss_pred             cCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy3166         131 SSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIV  210 (228)
Q Consensus       131 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~  210 (228)
                      +.++.+||+|||+++......... ......||+.|||||++.+..|+.++|||||||++|||+|.|..||.+.+..++.
T Consensus       162 ~~~~~~Ki~DFGla~~~~~~~~~~-~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~  240 (299)
T 4asz_A          162 GENLLVKIGDFGMSRDVYSTDYYR-VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI  240 (299)
T ss_dssp             CGGGCEEECCCSCHHHHTGGGCEE-ETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred             CCCCcEEECCcccceecCCCCcee-ecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            999999999999998654433221 1223467889999999999999999999999999999998789999999999999


Q ss_pred             HHHHcCCCCCCCCCCCCC
Q psy3166         211 HYLSTGYRMERPASCNEQ  228 (228)
Q Consensus       211 ~~~~~~~~~~~p~~~~~~  228 (228)
                      ..+.++.+++.|+.||++
T Consensus       241 ~~i~~~~~~~~p~~~~~~  258 (299)
T 4asz_A          241 ECITQGRVLQRPRTCPQE  258 (299)
T ss_dssp             HHHHHTCCCCCCTTCCHH
T ss_pred             HHHHcCCCCCCCccchHH
Confidence            999999999999999863


No 2  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=5.9e-53  Score=341.48  Aligned_cols=218  Identities=35%  Similarity=0.611  Sum_probs=184.7

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      ..++.+++++.+.||+|+||+||+|.+.+..    +..+++.||||.++........+.+.+|+.+|+++ +||||++++
T Consensus        21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~----~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~   95 (308)
T 4gt4_A           21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPA----PGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLL   95 (308)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEEC-----------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             ccCCHHHCeEeeEeccCCCcEEEEEEEcCCc----cCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcc
Confidence            3578899999999999999999999975432    34556789999997665445567899999999999 999999999


Q ss_pred             eEEEcC-ceEEEEecCCCCcHHHHHHH------------------------------------hcccCCCCcccCCCCCC
Q psy3166          85 GCCYKD-ELRLVVEYCALGDLQSYLRE------------------------------------EYLSNNKVVHRDLATRN  127 (228)
Q Consensus        85 ~~~~~~-~~~lv~e~~~~~~L~~~l~~------------------------------------~~lh~~~i~H~~lk~~n  127 (228)
                      +++..+ .+++||||+++|+|.++|..                                    .|||+++|+||||||+|
T Consensus        96 g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~N  175 (308)
T 4gt4_A           96 GVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN  175 (308)
T ss_dssp             EEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             eEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccc
Confidence            998764 48999999999999999831                                    69999999999999999


Q ss_pred             EeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy3166         128 ILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC  207 (228)
Q Consensus       128 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~  207 (228)
                      ||++.++.+||+|||+++.+...... .......||+.|||||++....|+.++|||||||++|||+|.|..||.+.+..
T Consensus       176 ILl~~~~~~Ki~DFGlar~~~~~~~~-~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~  254 (308)
T 4gt4_A          176 VLVYDKLNVKISDLGLFREVYAADYY-KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ  254 (308)
T ss_dssp             EEECGGGCEEECCSCCBCGGGGGGCB-CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH
T ss_pred             eEECCCCCEEECCcccceeccCCCce-eEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999999999866443322 22334678899999999999999999999999999999998789999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCC
Q psy3166         208 RIVHYLSTGYRMERPASCNEQ  228 (228)
Q Consensus       208 ~~~~~~~~~~~~~~p~~~~~~  228 (228)
                      ++.+.+.++.+++.|+.||++
T Consensus       255 ~~~~~i~~~~~~~~p~~~~~~  275 (308)
T 4gt4_A          255 DVVEMIRNRQVLPCPDDCPAW  275 (308)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHH
T ss_pred             HHHHHHHcCCCCCCcccchHH
Confidence            999999999999999999863


No 3  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=2.7e-52  Score=340.47  Aligned_cols=217  Identities=40%  Similarity=0.676  Sum_probs=179.0

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      +.|+.++|.+.++||+|+||+||+|++++..    +..++..||||.++.. .....+.+.+|+++|+++ +||||++++
T Consensus        36 ~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~----~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l-~HpnIV~l~  109 (329)
T 4aoj_A           36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLL----PEQDKMLVAVKALKEA-SESARQDFQREAELLTML-QHQHIVRFF  109 (329)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEESSSC----C---CEEEEEEEESCC-SHHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred             cccCHHHeEEEEEEccCCCcEEEEEEECCcc----cCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhC-CCCCCCcEE
Confidence            4578899999999999999999999876532    3456678999999754 445567899999999999 999999999


Q ss_pred             eEEEcC-ceEEEEecCCCCcHHHHHHH-----------------------------------hcccCCCCcccCCCCCCE
Q psy3166          85 GCCYKD-ELRLVVEYCALGDLQSYLRE-----------------------------------EYLSNNKVVHRDLATRNI  128 (228)
Q Consensus        85 ~~~~~~-~~~lv~e~~~~~~L~~~l~~-----------------------------------~~lh~~~i~H~~lk~~ni  128 (228)
                      +++..+ .+++||||+++|+|.+++..                                   .|||+++|+||||||+||
T Consensus       110 g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NI  189 (329)
T 4aoj_A          110 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNC  189 (329)
T ss_dssp             EEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             EEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhE
Confidence            998764 48999999999999998741                                   699999999999999999


Q ss_pred             eecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy3166         129 LLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCR  208 (228)
Q Consensus       129 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~  208 (228)
                      |++.++.+||+|||+++.+...... .......||+.|||||++.+..|+.++|||||||++|||+|.|..||.+.+..+
T Consensus       190 Ll~~~~~~Ki~DFGla~~~~~~~~~-~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~  268 (329)
T 4aoj_A          190 LVGQGLVVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE  268 (329)
T ss_dssp             EEETTTEEEECCCC-----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH
T ss_pred             EECCCCcEEEcccccceeccCCCcc-eecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH
Confidence            9999999999999999865443221 122345788999999999999999999999999999999987899999999999


Q ss_pred             HHHHHHcCCCCCCCCCCCCC
Q psy3166         209 IVHYLSTGYRMERPASCNEQ  228 (228)
Q Consensus       209 ~~~~~~~~~~~~~p~~~~~~  228 (228)
                      +...+.++.+++.|+.||++
T Consensus       269 ~~~~i~~g~~~~~p~~~~~~  288 (329)
T 4aoj_A          269 AIDCITQGRELERPRACPPE  288 (329)
T ss_dssp             HHHHHHHTCCCCCCTTCCHH
T ss_pred             HHHHHHcCCCCCCcccccHH
Confidence            99999999999999999864


No 4  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=5e-53  Score=340.70  Aligned_cols=208  Identities=25%  Similarity=0.418  Sum_probs=178.4

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      ..+++|++.+.||+|+||+||+|+         +..+++.||+|.+++..  .....+.+.+|+++|+++ +||||++++
T Consensus        29 ~~~~dy~i~~~lG~G~fg~V~~a~---------~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~   98 (311)
T 4aw0_A           29 KRPEDFKFGKILGEGSFSTVVLAR---------ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY   98 (311)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEE---------ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred             CCccccEEEEEEecccCeEEEEEE---------ECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence            445789999999999999999998         44566789999986431  112346788999999999 999999999


Q ss_pred             eEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          85 GCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        85 ~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      +++.+++ +|+|||||+||+|.+++..                    +|||+++|+||||||+|||++.++.+||+|||+
T Consensus        99 ~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGl  178 (311)
T 4aw0_A           99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGT  178 (311)
T ss_dssp             EEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCC
Confidence            9998755 8999999999999999875                    699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPA  223 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~  223 (228)
                      ++.+..... .....+.+||+.|||||++.+..|+.++||||+||++|+|++ |..||.+.+..++.+++.++ .++.|+
T Consensus       179 a~~~~~~~~-~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~-G~~PF~~~~~~~~~~~i~~~-~~~~p~  255 (311)
T 4aw0_A          179 AKVLSPESK-QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPFRAGNEGLIFAKIIKL-EYDFPE  255 (311)
T ss_dssp             CEECCTTTT-CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHT-CCCCCT
T ss_pred             ceecCCCCC-cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CCCCCc
Confidence            986643321 122345789999999999999999999999999999999999 99999999999999999887 677787


Q ss_pred             CCCC
Q psy3166         224 SCNE  227 (228)
Q Consensus       224 ~~~~  227 (228)
                      .+++
T Consensus       256 ~~s~  259 (311)
T 4aw0_A          256 KFFP  259 (311)
T ss_dssp             TCCH
T ss_pred             ccCH
Confidence            7764


No 5  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1e-52  Score=343.96  Aligned_cols=205  Identities=22%  Similarity=0.394  Sum_probs=172.6

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      -++|++++.||+|+||+||+|+         +..+++.||+|.++.. ......+++.+|+++|+++ +||||+++++++
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~---------~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~   92 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVK---------STEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESF   92 (350)
T ss_dssp             CCCEEEEEEC------CEEEEE---------ETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEE---------ECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEE
Confidence            4689999999999999999998         4455668999999755 3455667899999999999 999999999998


Q ss_pred             EcCc-eEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          88 YKDE-LRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        88 ~~~~-~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      ..+. +|+|||||+||+|.+++..                      .|||++||+||||||+|||++.+|.+||+|||++
T Consensus        93 ~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla  172 (350)
T 4b9d_A           93 EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA  172 (350)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEE
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccc
Confidence            7654 8999999999999999853                      6999999999999999999999999999999999


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS  224 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~~  224 (228)
                      +.+......   .....||+.|||||++.+..|+.++||||+||++|+|+| |..||.+.+..+++.++.++..++.|..
T Consensus       173 ~~~~~~~~~---~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemlt-G~~PF~~~~~~~~~~~i~~~~~~~~~~~  248 (350)
T 4b9d_A          173 RVLNSTVEL---ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT-LKHAFEAGSMKNLVLKIISGSFPPVSLH  248 (350)
T ss_dssp             SCCCHHHHH---HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHTCCCCCCTT
T ss_pred             eeecCCccc---ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHcCCCCCCCcc
Confidence            865433211   123468899999999999999999999999999999999 9999999999999999999888888877


Q ss_pred             CCC
Q psy3166         225 CNE  227 (228)
Q Consensus       225 ~~~  227 (228)
                      +|+
T Consensus       249 ~s~  251 (350)
T 4b9d_A          249 YSY  251 (350)
T ss_dssp             SCH
T ss_pred             CCH
Confidence            765


No 6  
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=4.9e-52  Score=341.64  Aligned_cols=219  Identities=41%  Similarity=0.781  Sum_probs=186.6

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      |.||.++|++.+.||+|+||+||+|.+.+..    ...+.+.||+|.++..........+.+|+.+|+++.+||||++++
T Consensus        59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~----~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~  134 (353)
T 4ase_A           59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGID----KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL  134 (353)
T ss_dssp             HBCCGGGEEEEEEEEECSSEEEEEEEEETSS----STTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cEecHHHeEEeeEEecCCCeEEEEEEEcCCC----cccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence            7899999999999999999999999976643    334556799999987766666778999999999996679999999


Q ss_pred             eEEEcC--ceEEEEecCCCCcHHHHHHH------------------------------------hcccCCCCcccCCCCC
Q psy3166          85 GCCYKD--ELRLVVEYCALGDLQSYLRE------------------------------------EYLSNNKVVHRDLATR  126 (228)
Q Consensus        85 ~~~~~~--~~~lv~e~~~~~~L~~~l~~------------------------------------~~lh~~~i~H~~lk~~  126 (228)
                      +++...  .+++|||||++|+|.++|+.                                    .|||+++|+||||||+
T Consensus       135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~  214 (353)
T 4ase_A          135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR  214 (353)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcc
Confidence            998653  48999999999999999842                                    5999999999999999


Q ss_pred             CEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         127 NILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       127 nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      |||++.++.+||+|||+++.+....... ......||+.|||||++.+..|+.++|||||||++|||+|.|..||.+...
T Consensus       215 NILl~~~~~vKi~DFGlar~~~~~~~~~-~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~  293 (353)
T 4ase_A          215 NILLSEKNVVKICDFGLARDIYKDPDYV-RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  293 (353)
T ss_dssp             GEEECGGGCEEECCCGGGSCTTTCTTSE-EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             ceeeCCCCCEEECcchhhhhcccCCCce-eeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999998664432221 122356788999999999999999999999999999999879999999764


Q ss_pred             -HHHHHHHHcCCCCCCCCCCCCC
Q psy3166         207 -CRIVHYLSTGYRMERPASCNEQ  228 (228)
Q Consensus       207 -~~~~~~~~~~~~~~~p~~~~~~  228 (228)
                       ..+...+..+.+++.|+.||+|
T Consensus       294 ~~~~~~~i~~g~~~~~p~~~~~~  316 (353)
T 4ase_A          294 DEEFCRRLKEGTRMRAPDYTTPE  316 (353)
T ss_dssp             SHHHHHHHHHTCCCCCCTTCCHH
T ss_pred             HHHHHHHHHcCCCCCCCccCCHH
Confidence             4567788999999999999864


No 7  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.3e-52  Score=338.05  Aligned_cols=210  Identities=26%  Similarity=0.381  Sum_probs=172.0

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      +++++|++.+.||+|+||+||+|+...      +..+++.||+|.+++.. ......++.+|+++|+++ +||||+++++
T Consensus        21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~------~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~   93 (304)
T 3ubd_A           21 ADPSQFELLKVLGQGSFGKVFLVKKIS------GSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHY   93 (304)
T ss_dssp             CCGGGEEEEEEEECGGGCEEEEEEECS------STTTTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEE
T ss_pred             CCccccEEEEEEecCCCeEEEEEEEcc------CCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEE
Confidence            567899999999999999999998533      34466789999986442 112234577899999999 9999999999


Q ss_pred             EEEcC-ceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          86 CCYKD-ELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        86 ~~~~~-~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      ++.++ .+|+|||||+||+|.+++..                    .|||+++|+||||||+|||++.+|.+||+|||++
T Consensus        94 ~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla  173 (304)
T 3ubd_A           94 AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS  173 (304)
T ss_dssp             EEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEE
T ss_pred             EEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccc
Confidence            98765 48999999999999999875                    6999999999999999999999999999999999


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS  224 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~~  224 (228)
                      +......   .......||+.|||||++.+..|+.++||||+||++|+|+| |..||.+.+..++..++.++ .++.|+.
T Consensus       174 ~~~~~~~---~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~  248 (304)
T 3ubd_A          174 KESIDHE---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKA-KLGMPQF  248 (304)
T ss_dssp             EC--------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC-CCCCCTT
T ss_pred             eeccCCC---ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHh-CCCCCCCcCHHHHHHHHHcC-CCCCCCc
Confidence            7543322   12335689999999999999999999999999999999999 99999999999999998887 6778888


Q ss_pred             CCCC
Q psy3166         225 CNEQ  228 (228)
Q Consensus       225 ~~~~  228 (228)
                      +|+|
T Consensus       249 ~s~~  252 (304)
T 3ubd_A          249 LSPE  252 (304)
T ss_dssp             SCHH
T ss_pred             CCHH
Confidence            7753


No 8  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=4e-51  Score=334.08  Aligned_cols=202  Identities=25%  Similarity=0.409  Sum_probs=172.8

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      +++-+.++|++.+.||+|+||+||+|+         +..+++.||+|+++.... ...+.+.+|+.+|+++ +||||+++
T Consensus        68 ~~~dp~~~y~~~~~iG~G~fG~V~~a~---------~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l-~HpnIV~l  136 (346)
T 4fih_A           68 DPGDPRSYLDNFIKIGEGSTGIVCIAT---------VRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDY-QHENVVEM  136 (346)
T ss_dssp             CSSCGGGTEEEEEEEEECSSCEEEEEE---------ETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHHC-CCTTBCCE
T ss_pred             CCCChhHhcEEeEEeecCcCeEEEEEE---------ECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHhC-CCCCCCcE
Confidence            345566789999999999999999998         445566899999864422 1234678999999999 99999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      ++++..+ .+|+|||||++|+|.+++..                   .|||+++|+||||||+|||++.+|.+||+|||+
T Consensus       137 ~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGl  216 (346)
T 4fih_A          137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF  216 (346)
T ss_dssp             EEEEEETTEEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcC
Confidence            9998765 48999999999999998865                   699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRME  220 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~  220 (228)
                      ++.+.....   ......||+.|||||++.+..|+.++||||+||++|+|++ |..||.+.+..+++..+..+..+.
T Consensus       217 a~~~~~~~~---~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~-G~~PF~~~~~~~~~~~i~~~~~~~  289 (346)
T 4fih_A          217 CAQVSKEVP---RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPYFNEPPLKAMKMIRDNLPPR  289 (346)
T ss_dssp             CEECCSSSC---CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSSCCC
T ss_pred             ceecCCCCC---cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHcCCCCC
Confidence            986544321   2345789999999999998899999999999999999999 999999999888888888775443


No 9  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=8.3e-51  Score=323.31  Aligned_cols=208  Identities=26%  Similarity=0.440  Sum_probs=159.8

Q ss_pred             ccCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCce
Q psy3166           3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHI   80 (228)
Q Consensus         3 ~~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni   80 (228)
                      ++.|-..++|++.+.||+|+||+||+|+         +..+++.||+|.+++..  ......++.+|+++|+++ +||||
T Consensus         6 l~~G~~ig~Y~i~~~lG~G~fg~V~~~~---------~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnI   75 (275)
T 3hyh_A            6 LADGAHIGNYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHI   75 (275)
T ss_dssp             --------CCEEEEEEEC---CCEEEEE---------CTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTB
T ss_pred             CCCCCEeeCeEEEEEEecCcCeEEEEEE---------ECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCC
Confidence            3445566799999999999999999998         55566789999987542  223346788999999999 99999


Q ss_pred             EEeeeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEe
Q psy3166          81 VSFIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKIS  139 (228)
Q Consensus        81 ~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~  139 (228)
                      +++++++...+ +++||||+ +|+|.+++..                    +|||+++|+||||||+|||++.++.+||+
T Consensus        76 v~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~  154 (275)
T 3hyh_A           76 IKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIA  154 (275)
T ss_dssp             CCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEEC
T ss_pred             CeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEe
Confidence            99999987754 88999999 6799998765                    69999999999999999999999999999


Q ss_pred             eccCcccccccccccCCCCCCCCcceeecccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Q psy3166         140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIY-TNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR  218 (228)
Q Consensus       140 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~  218 (228)
                      |||+++......    ......||+.|+|||++.+..+ +.++||||+||++|+|+| |..||.+.+..++.+++.++ .
T Consensus       155 DFGla~~~~~~~----~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~llt-g~~PF~~~~~~~~~~~i~~~-~  228 (275)
T 3hyh_A          155 DFGLSNIMTDGN----FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC-RRLPFDDESIPVLFKNISNG-V  228 (275)
T ss_dssp             CSSCC-------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHT-C
T ss_pred             ecCCCeecCCCC----ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHcC-C
Confidence            999997654322    2234678999999999998776 579999999999999999 99999999888888888887 6


Q ss_pred             CCCCCCCCC
Q psy3166         219 MERPASCNE  227 (228)
Q Consensus       219 ~~~p~~~~~  227 (228)
                      ++.|..+++
T Consensus       229 ~~~p~~~s~  237 (275)
T 3hyh_A          229 YTLPKFLSP  237 (275)
T ss_dssp             CCCCTTSCH
T ss_pred             CCCCCCCCH
Confidence            677877764


No 10 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=1.5e-50  Score=326.53  Aligned_cols=209  Identities=30%  Similarity=0.540  Sum_probs=170.3

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      .|.|+.+++++.+.||+|+||+||+|++++            .||||.++.. ......+.+.+|+.+|+++ +||||++
T Consensus        30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~------------~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~   96 (307)
T 3omv_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHG------------DVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILL   96 (307)
T ss_dssp             CCBCCTTSCCEEEECCCCSSSEEEEEESSS------------EEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCC
T ss_pred             CcEEcHHHeEEeeEEeeCCCcEEEEEEECC------------cEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEee
Confidence            488999999999999999999999998532            3899998754 3455667899999999999 9999999


Q ss_pred             eeeEEEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          83 FIGCCYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      +++++..+.+++|||||++|+|.+++..                     .|||+++|+||||||+|||++.++.+||+||
T Consensus        97 l~g~~~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DF  176 (307)
T 3omv_A           97 FMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDF  176 (307)
T ss_dssp             EEEEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCC
T ss_pred             EEEEEECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeec
Confidence            9999888889999999999999999854                     6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeeccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHcCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRI-VHYLSTGY  217 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~---~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~-~~~~~~~~  217 (228)
                      |+++........ .......||+.|||||++..   ..|+.++|||||||++|||+| |..||.+.++.+. ...+..+.
T Consensus       177 Gla~~~~~~~~~-~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ellt-g~~Pf~~~~~~~~~~~~~~~~~  254 (307)
T 3omv_A          177 GLATVKSRWSGS-QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT-GELPYSHINNRDQIIFMVGRGY  254 (307)
T ss_dssp             SSCBC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHH-SSCTTTTCCCHHHHHHHHHTTC
T ss_pred             cCceecccCCcc-eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHH-CCCCCCCCChHHHHHHHHhcCC
Confidence            999755332211 12234678999999999863   358999999999999999999 9999998766544 55566665


Q ss_pred             CCC----CCCCCCC
Q psy3166         218 RME----RPASCNE  227 (228)
Q Consensus       218 ~~~----~p~~~~~  227 (228)
                      +.|    .|.+||+
T Consensus       255 ~~p~~~~~~~~~~~  268 (307)
T 3omv_A          255 ASPDLSKLYKNCPK  268 (307)
T ss_dssp             CCCCSTTSCTTSCH
T ss_pred             CCCCcccccccchH
Confidence            554    3456654


No 11 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=3.5e-50  Score=336.03  Aligned_cols=208  Identities=25%  Similarity=0.394  Sum_probs=176.2

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      +++-|.++|++.+.||+|+||+||+|+         +..+++.||+|+++.... ...+.+.+|+.+|+++ +||||+++
T Consensus       145 ~~~dp~~~y~~~~~iG~G~fG~V~~a~---------~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l-~HpnIV~l  213 (423)
T 4fie_A          145 DPGDPRSYLDNFIKIGEGSTGIVCIAT---------VRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDY-QHENVVEM  213 (423)
T ss_dssp             CSSCGGGTEEEEEEEEECSSCEEEEEE---------ETTTCCEEEEEEEESTTC-SSGGGHHHHHHHHHHC-CCTTBCCE
T ss_pred             CCCChhHhcEeeeEeccCcCcEEEEEE---------ECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHhC-CCCCCCce
Confidence            456677889999999999999999998         445566899999875432 2235678999999999 99999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      ++++..+ .+|+|||||+||+|.+++..                   .|||++||+||||||+|||++.+|.+||+|||+
T Consensus       214 ~~~~~~~~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGl  293 (423)
T 4fie_A          214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF  293 (423)
T ss_dssp             EEEEEETTEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTT
T ss_pred             EEEEEECCEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCcc
Confidence            9998765 48999999999999998865                   699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--C
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRME--R  221 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~--~  221 (228)
                      ++.+.....   .....+||+.|||||++.+..|+.++|||||||++|+|++ |..||.+.+..+++..+..+..+.  .
T Consensus       294 a~~~~~~~~---~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~-G~~PF~~~~~~~~~~~i~~~~~~~~~~  369 (423)
T 4fie_A          294 CAQVSKEVP---RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPYFNEPPLKAMKMIRDNLPPRLKN  369 (423)
T ss_dssp             CEECCSSCC---CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSCCCCCSC
T ss_pred             ceECCCCCc---cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHcCCCCCCcc
Confidence            986544321   2345688999999999999999999999999999999999 999999999888888888775443  3


Q ss_pred             CCCCC
Q psy3166         222 PASCN  226 (228)
Q Consensus       222 p~~~~  226 (228)
                      +..++
T Consensus       370 ~~~~s  374 (423)
T 4fie_A          370 LHKVS  374 (423)
T ss_dssp             TTSSC
T ss_pred             cccCC
Confidence            34444


No 12 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=6.7e-50  Score=325.91  Aligned_cols=203  Identities=20%  Similarity=0.310  Sum_probs=167.4

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      ..+.|++.++||+|+||+||+|+         ++.+++.||+|.++....      ..+|+.+|+++ +||||+++++++
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~---------~~~~g~~vAiK~i~~~~~------~~~E~~il~~l-~HpnIV~l~~~~  119 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMK---------DKQTGFQCAVKKVRLEVF------RVEELVACAGL-SSPRIVPLYGAV  119 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEE---------ETTTCCEEEEEEEETTTC------CTHHHHTTTTC-CCTTBCCEEEEE
T ss_pred             chhheEeCcEeccCCCeEEEEEE---------ECCCCCEEEEEEECHHHh------HHHHHHHHHhC-CCCCCCcEEEEE
Confidence            45678999999999999999998         445666899999975422      23699999999 999999999998


Q ss_pred             EcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCC-cEEEeeccCcc
Q psy3166          88 YKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPH-VVKISDFGLSE  145 (228)
Q Consensus        88 ~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~-~~kl~dfg~~~  145 (228)
                      ..+. +|+||||++||+|.+++..                    .|||+++|+||||||+|||++.+| .+||+|||+++
T Consensus       120 ~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~  199 (336)
T 4g3f_A          120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL  199 (336)
T ss_dssp             EETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCE
T ss_pred             EECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCe
Confidence            7654 8899999999999999875                    699999999999999999999987 69999999998


Q ss_pred             ccccccccc--CCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--CC
Q psy3166         146 DIYEQNVFQ--NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRM--ER  221 (228)
Q Consensus       146 ~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~--~~  221 (228)
                      .+.......  .......||+.|||||++.+..|+.++||||+||++|+|+| |..||.+.+..++..++..+..+  +.
T Consensus       200 ~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~  278 (336)
T 4g3f_A          200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN-GCHPWTQYFRGPLCLKIASEPPPIREI  278 (336)
T ss_dssp             EC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSTTTCCSCCHHHHHHSCCGGGGS
T ss_pred             EccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CcCCCCCCCHHHHHHHHHcCCCCchhc
Confidence            664432211  11234579999999999999999999999999999999999 99999998888888888776443  35


Q ss_pred             CCCCCC
Q psy3166         222 PASCNE  227 (228)
Q Consensus       222 p~~~~~  227 (228)
                      |+.+|+
T Consensus       279 ~~~~s~  284 (336)
T 4g3f_A          279 PPSCAP  284 (336)
T ss_dssp             CTTSCH
T ss_pred             CccCCH
Confidence            677764


No 13 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=2.5e-48  Score=311.44  Aligned_cols=198  Identities=26%  Similarity=0.412  Sum_probs=162.2

Q ss_pred             eeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc-
Q psy3166          12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK-   89 (228)
Q Consensus        12 ~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~-   89 (228)
                      |++.++||+|+||+||+|++         ..++..||+|.+... ......+++.+|+++|+++ +||||+++++++.. 
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~---------~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~   97 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLD---------TETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWEST   97 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEE---------TTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEE---------CCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeec
Confidence            48889999999999999984         445567999998644 3455567899999999999 99999999998854 


Q ss_pred             ----CceEEEEecCCCCcHHHHHHH--------------------hcccCCC--CcccCCCCCCEeecC-CCcEEEeecc
Q psy3166          90 ----DELRLVVEYCALGDLQSYLRE--------------------EYLSNNK--VVHRDLATRNILLSS-PHVVKISDFG  142 (228)
Q Consensus        90 ----~~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~--i~H~~lk~~nil~~~-~~~~kl~dfg  142 (228)
                          +.+++||||+++|+|.+++..                    .|||+++  |+||||||+|||++. ++.+||+|||
T Consensus        98 ~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFG  177 (290)
T 3fpq_A           98 VKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG  177 (290)
T ss_dssp             ETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTT
T ss_pred             cCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCc
Confidence                237899999999999999865                    6999998  999999999999985 7899999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCC-
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL-CRIVHYLSTGYRME-  220 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~-~~~~~~~~~~~~~~-  220 (228)
                      +++.....     ......||+.|||||++.+ .|+.++|||||||++|+|+| |..||.+... ..+.+.+..+.+++ 
T Consensus       178 la~~~~~~-----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyellt-g~~Pf~~~~~~~~~~~~i~~~~~~~~  250 (290)
T 3fpq_A          178 LATLKRAS-----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMAT-SEYPYSECQNAAQIYRRVTSGVKPAS  250 (290)
T ss_dssp             GGGGCCTT-----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHH-SSCTTTTCSSHHHHHHHHTTTCCCGG
T ss_pred             CCEeCCCC-----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHH-CCCCCCCCCcHHHHHHHHHcCCCCCC
Confidence            99743221     1234678999999998865 59999999999999999999 9999987544 45567777776553 


Q ss_pred             CCCCCC
Q psy3166         221 RPASCN  226 (228)
Q Consensus       221 ~p~~~~  226 (228)
                      .|..++
T Consensus       251 ~~~~~~  256 (290)
T 3fpq_A          251 FDKVAI  256 (290)
T ss_dssp             GGGCCC
T ss_pred             CCccCC
Confidence            344444


No 14 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=3.6e-48  Score=312.51  Aligned_cols=194  Identities=23%  Similarity=0.425  Sum_probs=149.9

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||+||+|++         +.+++.||+|.++........+++.+|+++|+++ +||||+++++++..
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~---------~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~   74 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKN---------KVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLE   74 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEE---------TTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEE
T ss_pred             hhCEEeeEEecCCCeEEEEEEE---------CCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEe
Confidence            4799999999999999999984         4455679999998666666667899999999999 99999999998854


Q ss_pred             Cc-------------eEEEEecCCCCcHHHHHHH-----------------------hcccCCCCcccCCCCCCEeecCC
Q psy3166          90 DE-------------LRLVVEYCALGDLQSYLRE-----------------------EYLSNNKVVHRDLATRNILLSSP  133 (228)
Q Consensus        90 ~~-------------~~lv~e~~~~~~L~~~l~~-----------------------~~lh~~~i~H~~lk~~nil~~~~  133 (228)
                      .+             +|++||||++|+|.+++..                       +|||+++|+||||||+|||++.+
T Consensus        75 ~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~  154 (299)
T 4g31_A           75 KNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMD  154 (299)
T ss_dssp             EC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             cCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCC
Confidence            22             6899999999999998763                       69999999999999999999999


Q ss_pred             CcEEEeeccCccccccccccc---------CCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3166         134 HVVKISDFGLSEDIYEQNVFQ---------NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI  204 (228)
Q Consensus       134 ~~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~  204 (228)
                      +.+||+|||+++.+.......         .......||+.|||||++.+..|+.++|||||||++|||++    ||.+.
T Consensus       155 ~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~----Pf~~~  230 (299)
T 4g31_A          155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY----PFSTQ  230 (299)
T ss_dssp             CCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS----CCSSH
T ss_pred             CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc----CCCCc
Confidence            999999999998664432111         11234578999999999999999999999999999999996    88653


Q ss_pred             CH-HHHHHHHHcCC
Q psy3166         205 PL-CRIVHYLSTGY  217 (228)
Q Consensus       205 ~~-~~~~~~~~~~~  217 (228)
                      .. ...+..+....
T Consensus       231 ~~~~~~~~~~~~~~  244 (299)
T 4g31_A          231 MERVRTLTDVRNLK  244 (299)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHHhcCC
Confidence            22 22344444443


No 15 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=7.8e-46  Score=309.42  Aligned_cols=195  Identities=23%  Similarity=0.384  Sum_probs=162.3

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++++.||+|+||+||+|+         +..+++.||||+++... ......++.+|+++|+++ +||||+++++++.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~---------~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~  123 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSAR---------RRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILR  123 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEE---------ETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECC
T ss_pred             CCeEEEEEEecccCeEEEEEE---------ECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeee
Confidence            689999999999999999998         44566789999997553 344556788999999999 9999999999874


Q ss_pred             c-------CceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          89 K-------DELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        89 ~-------~~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      .       +.+|+||||+. |+|.+++..                    .|||++||+||||||+|||++.++.+||+||
T Consensus       124 ~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DF  202 (398)
T 4b99_A          124 PTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDF  202 (398)
T ss_dssp             CSSCTTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCC
T ss_pred             cccccccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeec
Confidence            3       34899999995 689888754                    6999999999999999999999999999999


Q ss_pred             cCcccccccccc-cCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         142 GLSEDIYEQNVF-QNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       142 g~~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      |+++.+...... ........||+.|+|||++.+. .++.++||||+||++|+|++ |..||.+.+..+.++.+.+.
T Consensus       203 Gla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~-G~~pF~g~~~~~~l~~I~~~  278 (398)
T 4b99_A          203 GMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA-RRQLFPGKNYVHQLQLIMMV  278 (398)
T ss_dssp             TTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH-TSCSSCCSSHHHHHHHHHHH
T ss_pred             ceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHH-CCCCCCCCCHHHHHHHHHHh
Confidence            999866443221 2233457899999999998865 46899999999999999999 99999999988888877654


No 16 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=2.2e-45  Score=320.53  Aligned_cols=205  Identities=24%  Similarity=0.314  Sum_probs=164.5

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHH---HHHHHHhcCCCCce
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLK---EINLMKDVGKHDHI   80 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~---e~~~l~~l~~h~ni   80 (228)
                      .+..++|++.+.||+|+||+||+|+         ++.+++.||+|.+++...  ........+   ++.+++.+ +||||
T Consensus       185 ~~slddf~i~k~LG~G~fG~V~la~---------~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~I  254 (689)
T 3v5w_A          185 HLTMNDFSVHRIIGRGGFGEVYGCR---------KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFI  254 (689)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEE---------ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTB
T ss_pred             CCchHHeEEEEEEecccCeEEEEEE---------ECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCE
Confidence            3566799999999999999999998         445667899999864310  011122333   45666677 89999


Q ss_pred             EEeeeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEe
Q psy3166          81 VSFIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKIS  139 (228)
Q Consensus        81 ~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~  139 (228)
                      +++++++.+.. +|+||||++||+|.+++..                    .|||++||+||||||+|||++.+|.+||+
T Consensus       255 V~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~  334 (689)
T 3v5w_A          255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS  334 (689)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             eEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEec
Confidence            99999998754 8999999999999999875                    69999999999999999999999999999


Q ss_pred             eccCcccccccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHc
Q psy3166         140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIP---LCRIVHYLST  215 (228)
Q Consensus       140 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~---~~~~~~~~~~  215 (228)
                      |||+++.+....     ..+.+||+.|||||++.. ..|+.++||||+||++|+|++ |..||.+.+   ..++...+..
T Consensus       335 DFGlA~~~~~~~-----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLt-G~~PF~~~~~~~~~~i~~~i~~  408 (689)
T 3v5w_A          335 DLGLACDFSKKK-----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPFRQHKTKDKHEIDRMTLT  408 (689)
T ss_dssp             CCTTCEECSSCC-----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCGGGCCCHHHHHHHHHH
T ss_pred             ccceeeecCCCC-----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcC
Confidence            999998654332     335689999999999974 579999999999999999999 999997643   3345555555


Q ss_pred             CCCCCCCCCCCC
Q psy3166         216 GYRMERPASCNE  227 (228)
Q Consensus       216 ~~~~~~p~~~~~  227 (228)
                      . .++.|..+++
T Consensus       409 ~-~~~~p~~~S~  419 (689)
T 3v5w_A          409 M-AVELPDSFSP  419 (689)
T ss_dssp             C-CCCCCTTSCH
T ss_pred             C-CCCCCccCCH
Confidence            5 6677777764


No 17 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=3.2e-44  Score=296.57  Aligned_cols=194  Identities=18%  Similarity=0.293  Sum_probs=154.8

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||+||+|+.+.      +..+++.||+|.+......   .++.+|+++|+.+.+||||+++++++..
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~------~~~~~~~vAiK~i~~~~~~---~~~~~E~~~l~~~~~h~nIv~l~~~~~~   91 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQL------QVGPEEKIALKHLIPTSHP---IRIAAELQCLTVAGGQDNVMGVKYCFRK   91 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEB------TTSCEEEEEEEEECTTSCH---HHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcc------cCCCCCEEEEEEEccccCH---HHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence            679999999999999999998532      2345678999998755333   4577899999999789999999999876


Q ss_pred             C-ceEEEEecCCCCcHHHHHHH-----------------hcccCCCCcccCCCCCCEeecCC-CcEEEeeccCccccccc
Q psy3166          90 D-ELRLVVEYCALGDLQSYLRE-----------------EYLSNNKVVHRDLATRNILLSSP-HVVKISDFGLSEDIYEQ  150 (228)
Q Consensus        90 ~-~~~lv~e~~~~~~L~~~l~~-----------------~~lh~~~i~H~~lk~~nil~~~~-~~~kl~dfg~~~~~~~~  150 (228)
                      . .+++||||+++|+|.+++..                 .|||++||+||||||+|||++.+ +.+||+|||+++.....
T Consensus        92 ~~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~  171 (361)
T 4f9c_A           92 NDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT  171 (361)
T ss_dssp             TTEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred             CCEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence            4 48899999999999998754                 79999999999999999999876 89999999999754332


Q ss_pred             ccc-------------------------cCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-
Q psy3166         151 NVF-------------------------QNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYPH-  203 (228)
Q Consensus       151 ~~~-------------------------~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~~-  203 (228)
                      ...                         .....+..||+.|+|||++.+. .|+.++||||+||++|+|++ |..||.. 
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~-G~~Pf~~~  250 (361)
T 4f9c_A          172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS-GRYPFYKA  250 (361)
T ss_dssp             SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH-TCSSSSCC
T ss_pred             cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHH-CCCCCCCC
Confidence            110                         0112345789999999999865 48999999999999999999 9999855 


Q ss_pred             CCHHHHHHHH
Q psy3166         204 IPLCRIVHYL  213 (228)
Q Consensus       204 ~~~~~~~~~~  213 (228)
                      .+..+.+.++
T Consensus       251 ~~~~~~l~~I  260 (361)
T 4f9c_A          251 SDDLTALAQI  260 (361)
T ss_dssp             SSHHHHHHHH
T ss_pred             CCHHHHHHHH
Confidence            4444444443


No 18 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=4.7e-44  Score=311.49  Aligned_cols=191  Identities=21%  Similarity=0.344  Sum_probs=166.5

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||+||+|+         ++.+++.||+|.+... .....+.+.+|+++|+.+ +||||+++++++..
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~---------~~~tg~~~AiK~i~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~  225 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVT---------ERATGNNFAAKFVMTP-HESDKETVRKEIQTMSVL-RHPTLVNLHDAFED  225 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEE---------ETTTCCEEEEEEEECC-SHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEC
T ss_pred             cccEEEEEEeeccCeEEEEEE---------ECCCCCEEEEEEEecc-chhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEE
Confidence            689999999999999999998         4456668999998754 334456788999999999 99999999999877


Q ss_pred             Cc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCC--CcEEEeeccCcc
Q psy3166          90 DE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSP--HVVKISDFGLSE  145 (228)
Q Consensus        90 ~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~--~~~kl~dfg~~~  145 (228)
                      +. ++++|||+.||+|.+++..                     .|||+++|+||||||+|||++.+  +.+||+|||+++
T Consensus       226 ~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~  305 (573)
T 3uto_A          226 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA  305 (573)
T ss_dssp             SSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCE
T ss_pred             CCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeecccee
Confidence            54 8899999999999998742                     69999999999999999999854  899999999998


Q ss_pred             cccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      .+......    ....||+.|+|||++.+..|+.++||||+||++|+|++ |..||.+.+..+++..+.++
T Consensus       306 ~~~~~~~~----~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~-G~~Pf~~~~~~~~~~~i~~~  371 (573)
T 3uto_A          306 HLDPKQSV----KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS-GLSPFGGENDDETLRNVKSC  371 (573)
T ss_dssp             ECCTTSEE----EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH-SCCSSCCSSHHHHHHHHHTT
T ss_pred             EccCCCce----eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHhC
Confidence            76443221    23568999999999999999999999999999999999 99999999999999888876


No 19 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.7e-44  Score=292.00  Aligned_cols=177  Identities=29%  Similarity=0.421  Sum_probs=139.4

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|.+.+.||+|+||+||+|++.           ++.||||.++....  .......|+..+.++ +||||+++++++..
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~-----------g~~VAvK~l~~~~~--~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~   68 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR-----------GEEVAVKIFSSREE--RSWFREAEIYQTVML-RHENILGFIAADNK   68 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET-----------TEEEEEEEECGGGH--HHHHHHHHHHTSTTC-CCTTBCCEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-----------CEEEEEEEECccch--hhHHHHHHHHHHhcC-CCCCCCcEEEEEEe
Confidence            57999999999999999999863           34699999875421  112233566666788 99999999999865


Q ss_pred             C-----ceEEEEecCCCCcHHHHHHH-------------------hcccCC--------CCcccCCCCCCEeecCCCcEE
Q psy3166          90 D-----ELRLVVEYCALGDLQSYLRE-------------------EYLSNN--------KVVHRDLATRNILLSSPHVVK  137 (228)
Q Consensus        90 ~-----~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~--------~i~H~~lk~~nil~~~~~~~k  137 (228)
                      +     .+++||||+++|+|.++++.                   .|||++        +|+||||||+|||++.++.+|
T Consensus        69 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~K  148 (303)
T 3hmm_A           69 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  148 (303)
T ss_dssp             ECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred             cCCCceEEEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEE
Confidence            3     37899999999999999875                   589976        999999999999999999999


Q ss_pred             EeeccCcccccccccc-cCCCCCCCCcceeecccccccC------CCCchhhHHHHHHHHHHHHhCCCCCC
Q psy3166         138 ISDFGLSEDIYEQNVF-QNGEPSEKLPIRWLALESLVSN------IYTNKSDVWSFGVVLWEIVTLGANPY  201 (228)
Q Consensus       138 l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Diwslg~~~~~l~t~g~~pf  201 (228)
                      |+|||+++........ ........||+.|||||++.+.      .++.++|||||||++|||+| |..||
T Consensus       149 i~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~t-g~~~~  218 (303)
T 3hmm_A          149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIG  218 (303)
T ss_dssp             ECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH-TBCBT
T ss_pred             EEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHH-CCCCC
Confidence            9999999765443222 1122345789999999998754      25678999999999999999 86554


No 20 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=1.2e-41  Score=282.63  Aligned_cols=220  Identities=43%  Similarity=0.846  Sum_probs=185.6

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      |.++.++|++.+.||+|+||.||+|.+.....  .....+..||+|.++..........+.+|+.+++++.+||||++++
T Consensus        76 ~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~--~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~  153 (370)
T 2psq_A           76 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDK--DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL  153 (370)
T ss_dssp             TBCCGGGEEEEEEESCCSSSEEEEEEEETCST--TCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred             ccccHHHCEeeeEEeeCCCeeEEEEEEecccC--cCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence            56788999999999999999999998654321  1234566799999987666666778999999999997899999999


Q ss_pred             eEEEcC-ceEEEEecCCCCcHHHHHHH------------------------------------hcccCCCCcccCCCCCC
Q psy3166          85 GCCYKD-ELRLVVEYCALGDLQSYLRE------------------------------------EYLSNNKVVHRDLATRN  127 (228)
Q Consensus        85 ~~~~~~-~~~lv~e~~~~~~L~~~l~~------------------------------------~~lh~~~i~H~~lk~~n  127 (228)
                      +++..+ .+++||||+++|+|.+++..                                    .|||+++|+||||||+|
T Consensus       154 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  233 (370)
T 2psq_A          154 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  233 (370)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             EEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhh
Confidence            998764 48999999999999988742                                    58999999999999999


Q ss_pred             EeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy3166         128 ILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC  207 (228)
Q Consensus       128 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~  207 (228)
                      ||++.++.+||+|||++..+...... .......++..|+|||++.+..++.++|+|||||++|+|++.|..||.+.+..
T Consensus       234 Ill~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~  312 (370)
T 2psq_A          234 VLVTENNVMKIADFGLARDINNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE  312 (370)
T ss_dssp             EEECTTCCEEECCCSSCEETTCCCTT-CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             EEECCCCCEEEccccCCcccCcccce-ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence            99999999999999999765433221 11223456778999999998889999999999999999998799999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCC
Q psy3166         208 RIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       208 ~~~~~~~~~~~~~~p~~~~~  227 (228)
                      ++...+..+.+++.|..|++
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~  332 (370)
T 2psq_A          313 ELFKLLKEGHRMDKPANCTN  332 (370)
T ss_dssp             GHHHHHHTTCCCCCCTTSCH
T ss_pred             HHHHHHhcCCCCCCCCCCCH
Confidence            99999999999999988875


No 21 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=9.1e-42  Score=278.64  Aligned_cols=216  Identities=35%  Similarity=0.616  Sum_probs=181.1

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      ..+..++|++.+.||+|+||.||+|.+..+.      ..+..||+|.++..........+.+|+.+++++ +||||++++
T Consensus        44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~  116 (325)
T 3kul_A           44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPG------QRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLE  116 (325)
T ss_dssp             CBCCGGGEEEEEEEEETTTEEEEEEEECCTT------SCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred             cccChhHeEEeeEEEeCCCcEEEEEEEecCC------CCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEE
Confidence            4577889999999999999999999875432      344569999998766666677899999999999 999999999


Q ss_pred             eEEEcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          85 GCCYKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        85 ~~~~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      +++..+. .++||||+.+++|.+++..                     .|||+++|+||||||+||+++.++.+||+|||
T Consensus       117 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  196 (325)
T 3kul_A          117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG  196 (325)
T ss_dssp             EEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCS
T ss_pred             EEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCC
Confidence            9987644 7899999999999999853                     69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      ++..+..............+|..|+|||++.+..++.++||||||+++|+|++.|..||.+.+..++...+..+.+++.|
T Consensus       197 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~  276 (325)
T 3kul_A          197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAP  276 (325)
T ss_dssp             SCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCC
T ss_pred             cccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCC
Confidence            99765443221111223445678999999988889999999999999999997799999999999999999999899999


Q ss_pred             CCCCC
Q psy3166         223 ASCNE  227 (228)
Q Consensus       223 ~~~~~  227 (228)
                      ..+|+
T Consensus       277 ~~~~~  281 (325)
T 3kul_A          277 MGCPH  281 (325)
T ss_dssp             TTCCH
T ss_pred             CCcCH
Confidence            88875


No 22 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=3.5e-42  Score=286.49  Aligned_cols=213  Identities=37%  Similarity=0.679  Sum_probs=181.5

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|.+..         ++..||+|.++..........+.+|+++|+++ +||||+++
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~  177 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRA---------DNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRL  177 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCE
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEec---------CCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEE
Confidence            467888999999999999999999998543         34579999988665555566788999999999 99999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++..+ ..++||||+++|+|.+++..                     .|||+++|+||||||+|||++.++.+||+||
T Consensus       178 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~Df  257 (377)
T 3cbl_A          178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDF  257 (377)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCG
T ss_pred             EEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcC
Confidence            9998764 48999999999999998764                     5999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |++....... .........++..|+|||++....++.++|+|||||++|+|+|.|..||.+.+..++.+.+..+.+++.
T Consensus       258 G~s~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~  336 (377)
T 3cbl_A          258 GMSREEADGV-YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC  336 (377)
T ss_dssp             GGCEECTTSE-EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCC
T ss_pred             CCceecCCCc-eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            9987543321 111112233466799999998888999999999999999999879999999999999999999999999


Q ss_pred             CCCCCC
Q psy3166         222 PASCNE  227 (228)
Q Consensus       222 p~~~~~  227 (228)
                      |..||+
T Consensus       337 ~~~~~~  342 (377)
T 3cbl_A          337 PELCPD  342 (377)
T ss_dssp             CTTCCH
T ss_pred             CCCCCH
Confidence            999885


No 23 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=6e-42  Score=282.68  Aligned_cols=207  Identities=22%  Similarity=0.352  Sum_probs=167.1

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||+||+|+..         .++..||+|.+++..  .........+|..+++.+.+||||+++
T Consensus        19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~---------~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l   89 (353)
T 3txo_A           19 RLGIDNFEFIRVLGKGSFGKVMLARVK---------ETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL   89 (353)
T ss_dssp             ----CCEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             CCchhheEEEEEEeeCCCEEEEEEEEc---------CCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeE
Confidence            356789999999999999999999843         445679999987542  122345677899999998789999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++.... +++||||+++|+|.+++..                    .|||++||+||||||+|||++.++.+||+|||
T Consensus        90 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG  169 (353)
T 3txo_A           90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFG  169 (353)
T ss_dssp             EEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEcccc
Confidence            99987754 8899999999999988764                    69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      +++......   .......||+.|+|||++.+..++.++|+||+||++|+|++ |..||.+.+..++.+.+..+ .+..|
T Consensus       170 ~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-G~~Pf~~~~~~~~~~~i~~~-~~~~p  244 (353)
T 3txo_A          170 MCKEGICNG---VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC-GHAPFEAENEDDLFEAILND-EVVYP  244 (353)
T ss_dssp             TCBCSCC------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC-CCCCC
T ss_pred             ceeecccCC---ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CCCCC
Confidence            987432221   12234578899999999988889999999999999999999 99999999999998888887 55566


Q ss_pred             CCCC
Q psy3166         223 ASCN  226 (228)
Q Consensus       223 ~~~~  226 (228)
                      ..++
T Consensus       245 ~~~~  248 (353)
T 3txo_A          245 TWLH  248 (353)
T ss_dssp             TTSC
T ss_pred             CCCC
Confidence            5554


No 24 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.4e-41  Score=278.77  Aligned_cols=206  Identities=24%  Similarity=0.362  Sum_probs=171.0

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      +..++|++.+.||+|+||+||+|+.         ..+++.||+|.+++..  .......+.+|+.+|+.+ +||||++++
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~   71 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVRE---------KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALK   71 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE---------TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEE
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEE---------CCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceE
Confidence            4568999999999999999999984         3455679999986431  112235678899999999 999999999


Q ss_pred             eEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          85 GCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        85 ~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      +++.... +++||||+++|+|.+++..                    .|||++||+||||||+||+++.++.+||+|||+
T Consensus        72 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~  151 (337)
T 1o6l_A           72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL  151 (337)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccc
Confidence            9987654 8899999999999988764                    699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPA  223 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~  223 (228)
                      ++......   .......||+.|+|||++.+..++.++|+|||||++|+|++ |..||.+.+..++.+.+..+ .+..|.
T Consensus       152 a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~  226 (337)
T 1o6l_A          152 CKEGISDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELILME-EIRFPR  226 (337)
T ss_dssp             CBCSCCTT---CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC-CCCCCT
T ss_pred             hhhcccCC---CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhc-CCCCCCCCCHHHHHHHHHcC-CCCCCC
Confidence            87532221   12234578889999999998889999999999999999999 99999998888888777765 556666


Q ss_pred             CCCC
Q psy3166         224 SCNE  227 (228)
Q Consensus       224 ~~~~  227 (228)
                      .+++
T Consensus       227 ~~s~  230 (337)
T 1o6l_A          227 TLSP  230 (337)
T ss_dssp             TSCH
T ss_pred             CCCH
Confidence            6654


No 25 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=4.2e-41  Score=275.05  Aligned_cols=204  Identities=26%  Similarity=0.442  Sum_probs=172.5

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      ..++|++.+.||+|+||.||+|++         ..++..||+|.+... ......+++.+|+.+|+++ +||||++++++
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~   82 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARH---------ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEV   82 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEE---------TTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEE---------CCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEE
Confidence            356899999999999999999984         445567999998654 3455567788999999999 89999999999


Q ss_pred             EEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166          87 CYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus        87 ~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      +.... .++||||+++++|.+++..                    .|||+++|+||||||+||+++.++.+||+|||++.
T Consensus        83 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  162 (328)
T 3fe3_A           83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN  162 (328)
T ss_dssp             EECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred             EEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCce
Confidence            87654 8899999999999998754                    69999999999999999999999999999999987


Q ss_pred             cccccccccCCCCCCCCcceeecccccccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q psy3166         146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYT-NKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS  224 (228)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~-~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~~  224 (228)
                      .......    .....||+.|+|||++.+..+. .++|+||+||++|+|++ |..||.+.+..++...+..+ ....|..
T Consensus       163 ~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~-~~~~p~~  236 (328)
T 3fe3_A          163 EFTVGGK----LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGQNLKELRERVLRG-KYRIPFY  236 (328)
T ss_dssp             GGSSSCG----GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC-CCCCCTT
T ss_pred             ecCCCCc----cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhC-CCCCCCC
Confidence            5543321    2345688899999999887765 78999999999999999 99999999988888888877 5566665


Q ss_pred             CCC
Q psy3166         225 CNE  227 (228)
Q Consensus       225 ~~~  227 (228)
                      +++
T Consensus       237 ~s~  239 (328)
T 3fe3_A          237 MST  239 (328)
T ss_dssp             SCH
T ss_pred             CCH
Confidence            553


No 26 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.4e-41  Score=278.43  Aligned_cols=207  Identities=24%  Similarity=0.402  Sum_probs=165.8

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      .-.++|++.+.||+|+||+||+|+.         ..++..||+|.+...........+.+|+++++++ +||||++++++
T Consensus         7 ~l~~~y~i~~~lG~G~~g~V~~a~~---------~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~   76 (347)
T 3zgw_A            7 ELLKYYELHETIGTGGFAKVKLACH---------ILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL-RHQHICQLYHV   76 (347)
T ss_dssp             TTTTTEEEEEEEEECSSCEEEEEEE---------TTTCCEEEEEEEESSCC---CCHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred             HHhcCeEEEEEEEcCCCeEEEEEEE---------CCCCCEEEEEEEEccccchHHHHHHHHHHHHHhC-CCCCEeeEEEE
Confidence            3458999999999999999999984         4455679999987664444445688999999999 99999999999


Q ss_pred             EEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166          87 CYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus        87 ~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      +.... .++||||+++++|.+++..                    .|||+++|+||||||+||+++.++.+||+|||++.
T Consensus        77 ~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~  156 (347)
T 3zgw_A           77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCA  156 (347)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcc
Confidence            87654 8899999999999998754                    69999999999999999999999999999999986


Q ss_pred             cccccccccCCCCCCCCcceeecccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Q psy3166         146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIY-TNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPAS  224 (228)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~~  224 (228)
                      ........  ......||+.|+|||++.+..+ +.++|+||+||++|+|++ |..||.+.+..++...+..+ .++.|..
T Consensus       157 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~  232 (347)
T 3zgw_A          157 KPKGNKDY--HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMC-GFLPFDDDNVMALYKKIMRG-KYDVPKW  232 (347)
T ss_dssp             C----------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHT-CCCCCTT
T ss_pred             cccCCCCc--cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHcC-CCCCCCC
Confidence            54332211  1234567889999999987775 889999999999999999 99999999988888888887 6666766


Q ss_pred             CCC
Q psy3166         225 CNE  227 (228)
Q Consensus       225 ~~~  227 (228)
                      +++
T Consensus       233 ~s~  235 (347)
T 3zgw_A          233 LSP  235 (347)
T ss_dssp             CCH
T ss_pred             CCH
Confidence            653


No 27 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=2.9e-41  Score=278.54  Aligned_cols=208  Identities=24%  Similarity=0.351  Sum_probs=172.5

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||+||+|+         +..+++.||+|.++....  ......+..|..++..+.+||||+++
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~---------~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l   86 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSE---------RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL   86 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEE---------ETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCE
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEE---------ECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeE
Confidence            3567899999999999999999998         445667899999875311  12235677899999988789999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++... .+++||||+++|+|.+++..                    .|||++||+||||||+|||++.++.+||+|||
T Consensus        87 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG  166 (353)
T 2i0e_A           87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG  166 (353)
T ss_dssp             EEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCC
Confidence            9998774 48899999999999998764                    69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      +++......   .......||+.|+|||++.+..++.++|+|||||++|+|++ |..||.+.+..++.+.+..+ .+..|
T Consensus       167 ~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-G~~Pf~~~~~~~~~~~i~~~-~~~~p  241 (353)
T 2i0e_A          167 MCKENIWDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSIMEH-NVAYP  241 (353)
T ss_dssp             TCBCCCCTT---CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC-CCCCC
T ss_pred             cccccccCC---cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHc-CCCCCCCCCHHHHHHHHHhC-CCCCC
Confidence            987432221   12334678999999999998889999999999999999999 99999999888888888876 56667


Q ss_pred             CCCCC
Q psy3166         223 ASCNE  227 (228)
Q Consensus       223 ~~~~~  227 (228)
                      ..+++
T Consensus       242 ~~~s~  246 (353)
T 2i0e_A          242 KSMSK  246 (353)
T ss_dssp             TTSCH
T ss_pred             CCCCH
Confidence            66654


No 28 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=3.6e-41  Score=277.20  Aligned_cols=208  Identities=25%  Similarity=0.376  Sum_probs=171.5

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||+||+|+.         ..+++.||+|.++....  .........|..++..+.+||||+++
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l   83 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEF---------KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM   83 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEE---------TTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEE---------CCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcE
Confidence            46778999999999999999999984         44566799999875311  11234567899999887799999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++.... +++||||+++|+|.+++..                    .|||++||+||||||+||+++.++.+||+|||
T Consensus        84 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG  163 (345)
T 1xjd_A           84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG  163 (345)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeECh
Confidence            99987654 8899999999999998764                    69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      +++......   .......||+.|+|||++.+..++.++|+||+||++|+|++ |..||.+.+..++.+.+..+ .+..|
T Consensus       164 ~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~-~~~~p  238 (345)
T 1xjd_A          164 MCKENMLGD---AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI-GQSPFHGQDEEELFHSIRMD-NPFYP  238 (345)
T ss_dssp             TCBCCCCTT---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC-CCCCC
T ss_pred             hhhhcccCC---CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHhC-CCCCC
Confidence            987532221   12234678899999999998889999999999999999999 99999999988888888877 55666


Q ss_pred             CCCCC
Q psy3166         223 ASCNE  227 (228)
Q Consensus       223 ~~~~~  227 (228)
                      ..+++
T Consensus       239 ~~~s~  243 (345)
T 1xjd_A          239 RWLEK  243 (345)
T ss_dssp             TTSCH
T ss_pred             cccCH
Confidence            66553


No 29 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=5e-41  Score=268.63  Aligned_cols=215  Identities=36%  Similarity=0.691  Sum_probs=173.0

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+.+..++|++.+.||+|+||.||+|....+.      ..+..||+|.++........+.+.+|+.+++++ +||||+++
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~   81 (281)
T 1mp8_A            9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPE------NPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKL   81 (281)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--------CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCE
T ss_pred             ceEEehHHeEEEeEeeecCCeeEEEEEEecCC------CCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceE
Confidence            35688899999999999999999999864422      344569999987665666677889999999999 99999999


Q ss_pred             eeEEEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++..+..++|||++++++|.+++..                     .|||+++|+|+||||+||+++.++.+||+|||
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  161 (281)
T 1mp8_A           82 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG  161 (281)
T ss_dssp             EEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--
T ss_pred             EEEEccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccc
Confidence            999877789999999999999998763                     69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      ++..........  .....++..|+|||.+....++.++|+||||+++|+|++.|..||.+.+..++...+..+.+++.|
T Consensus       162 ~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (281)
T 1mp8_A          162 LSRYMEDSTYYK--ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP  239 (281)
T ss_dssp             -------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC
T ss_pred             cccccCcccccc--cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCC
Confidence            987654332111  122345678999999988889999999999999999996599999999888899999999888888


Q ss_pred             CCCCC
Q psy3166         223 ASCNE  227 (228)
Q Consensus       223 ~~~~~  227 (228)
                      ..+|+
T Consensus       240 ~~~~~  244 (281)
T 1mp8_A          240 PNCPP  244 (281)
T ss_dssp             TTCCH
T ss_pred             CCCCH
Confidence            88875


No 30 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.3e-41  Score=280.57  Aligned_cols=217  Identities=37%  Similarity=0.700  Sum_probs=181.0

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      +.++.++|++.+.||+|+||+||+|.+.+..    +..++..||+|.++..........+.+|+.+++++ +||||++++
T Consensus        66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~  140 (367)
T 3l9p_A           66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMP----NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCI  140 (367)
T ss_dssp             CBCCGGGEEEEEECCCCSSSCEEEEEECC---------CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             hhcCHhHeEEeeEeeeCCCEEEEEEEEccCC----CCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEE
Confidence            3577899999999999999999999976533    33466789999997665666667888999999999 999999999


Q ss_pred             eEEEcC-ceEEEEecCCCCcHHHHHHH---------------------------hcccCCCCcccCCCCCCEeecCCC--
Q psy3166          85 GCCYKD-ELRLVVEYCALGDLQSYLRE---------------------------EYLSNNKVVHRDLATRNILLSSPH--  134 (228)
Q Consensus        85 ~~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------------~~lh~~~i~H~~lk~~nil~~~~~--  134 (228)
                      +++..+ ..++||||+++|+|.+++..                           .|||+++|+||||||+|||++.++  
T Consensus       141 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~  220 (367)
T 3l9p_A          141 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG  220 (367)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTT
T ss_pred             EEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCC
Confidence            998764 47899999999999998763                           589999999999999999999554  


Q ss_pred             -cEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy3166         135 -VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYL  213 (228)
Q Consensus       135 -~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~  213 (228)
                       .+||+|||+++.+...... .......+|..|+|||++.+..++.++|+|||||++|+|++.|..||.+.+..++...+
T Consensus       221 ~~~kL~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i  299 (367)
T 3l9p_A          221 RVAKIGDFGMARDIYRAGYY-RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV  299 (367)
T ss_dssp             CCEEECCCHHHHHHHHHSSC-TTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             ceEEECCCcccccccccccc-ccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence             5999999998755433221 11223456778999999998889999999999999999997799999999999999999


Q ss_pred             HcCCCCCCCCCCCC
Q psy3166         214 STGYRMERPASCNE  227 (228)
Q Consensus       214 ~~~~~~~~p~~~~~  227 (228)
                      ..+.+++.|..+|+
T Consensus       300 ~~~~~~~~~~~~~~  313 (367)
T 3l9p_A          300 TSGGRMDPPKNCPG  313 (367)
T ss_dssp             HTTCCCCCCTTCCH
T ss_pred             HcCCCCCCCccCCH
Confidence            99988888888875


No 31 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=4.9e-41  Score=280.75  Aligned_cols=210  Identities=22%  Similarity=0.383  Sum_probs=166.8

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceE
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIV   81 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~   81 (228)
                      +..+..++|++.+.||+|+||+||+|+.         ..+++.||+|.+++..  .......+.+|..++.++.+||||+
T Consensus        46 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~---------~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv  116 (396)
T 4dc2_A           46 SSSLGLQDFDLLRVIGRGSYAKVLLVRL---------KKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV  116 (396)
T ss_dssp             ---CCGGGEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBC
T ss_pred             ccCCChhHcEEEEEEeeCCCeEEEEEEE---------CCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcC
Confidence            3457778999999999999999999984         4455679999987542  2223345778999998887899999


Q ss_pred             EeeeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEee
Q psy3166          82 SFIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISD  140 (228)
Q Consensus        82 ~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~d  140 (228)
                      ++++++.... +++||||+++|+|.+++..                    .|||+++|+||||||+|||++.++.+||+|
T Consensus       117 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~D  196 (396)
T 4dc2_A          117 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTD  196 (396)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECC
T ss_pred             eeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEee
Confidence            9999987754 8899999999999988764                    699999999999999999999999999999


Q ss_pred             ccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---------HHHHHH
Q psy3166         141 FGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP---------LCRIVH  211 (228)
Q Consensus       141 fg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~---------~~~~~~  211 (228)
                      ||+++......   .......||+.|+|||++.+..++.++|+|||||++|+|++ |..||....         ...+.+
T Consensus       197 FGla~~~~~~~---~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~-G~~Pf~~~~~~~~~~~~~~~~~~~  272 (396)
T 4dc2_A          197 YGMCKEGLRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRSPFDIVGSSDNPDQNTEDYLFQ  272 (396)
T ss_dssp             CTTCBCCCCTT---CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSTTTTC------CCHHHHHH
T ss_pred             cceeeecccCC---CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHh-CCCCCcccccccccchhhHHHHHH
Confidence            99987432221   12345678999999999999999999999999999999999 999996431         223444


Q ss_pred             HHHcCCCCCCCCCCCC
Q psy3166         212 YLSTGYRMERPASCNE  227 (228)
Q Consensus       212 ~~~~~~~~~~p~~~~~  227 (228)
                      .+..+ .+..|..+++
T Consensus       273 ~i~~~-~~~~p~~~s~  287 (396)
T 4dc2_A          273 VILEK-QIRIPRSLSV  287 (396)
T ss_dssp             HHHHC-CCCCCTTSCH
T ss_pred             HHhcc-ccCCCCcCCH
Confidence            45544 6667766653


No 32 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=2.5e-41  Score=287.66  Aligned_cols=210  Identities=38%  Similarity=0.664  Sum_probs=181.3

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||+||+|.+..          +..||+|.++....  ..+.+.+|+.+|+++ +||||+++
T Consensus       182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~----------~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~h~~iv~l  248 (454)
T 1qcf_A          182 AWEIPRESLKLEKKLGAGQFGEVWMATYNK----------HTKVAVKTMKPGSM--SVEAFLAEANVMKTL-QHDKLVKL  248 (454)
T ss_dssp             CSBCCGGGEEEEEEEECCSSEEEEEEEETT----------TEEEEEEEECTTSB--CHHHHHHHHHHHTTC-CCTTBCCE
T ss_pred             ceeechHHeEEEEEcccCCceEEEEEEECC----------ccEEEEEEecCCCc--cHHHHHHHHHHHhhC-CCCCEeeE
Confidence            467899999999999999999999998643          23599999975432  346788999999999 99999999


Q ss_pred             eeEEEcCceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKDELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++..+..++||||+++|+|.+++..                      .|||+++|+||||||+|||++.++.+||+||
T Consensus       249 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DF  328 (454)
T 1qcf_A          249 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF  328 (454)
T ss_dssp             EEEECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECST
T ss_pred             EEEEeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeC
Confidence            999887779999999999999999863                      5999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |+++........  ......++..|+|||++....++.++||||||+++|+|+|.|..||.+.+..++.+.+..+.+++.
T Consensus       329 G~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~  406 (454)
T 1qcf_A          329 GLARVIEDNEYT--AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR  406 (454)
T ss_dssp             TGGGGBCCHHHH--TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC
T ss_pred             CCceEcCCCcee--ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            999765432211  112344567899999999888999999999999999999889999999999999999999999999


Q ss_pred             CCCCCCC
Q psy3166         222 PASCNEQ  228 (228)
Q Consensus       222 p~~~~~~  228 (228)
                      |..||++
T Consensus       407 ~~~~~~~  413 (454)
T 1qcf_A          407 PENCPEE  413 (454)
T ss_dssp             CTTSCHH
T ss_pred             CCCCCHH
Confidence            9998853


No 33 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=3.6e-41  Score=274.39  Aligned_cols=203  Identities=25%  Similarity=0.399  Sum_probs=170.3

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||+||+|+.         ..+++.||+|.++....  ....+.+.+|..+++.+ +||||+++
T Consensus         2 ~~~~~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~   71 (318)
T 1fot_A            2 KYSLQDFQILRTLGTGSFGRVHLIRS---------RHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRM   71 (318)
T ss_dssp             -CCGGGEEEEEEEEECSSCEEEEEEE---------TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCE
T ss_pred             CCChHHcEEEEEEeeCCCEEEEEEEE---------CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceE
Confidence            45678999999999999999999984         34456799999864321  12235677899999999 99999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++.... +++||||+++|+|.+++..                    .|||++||+||||||+||+++.++.+||+|||
T Consensus        72 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg  151 (318)
T 1fot_A           72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFG  151 (318)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCS
T ss_pred             eEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecC
Confidence            99987654 8899999999999998864                    69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      +++.....      .....||+.|+|||++.+..++.++|+||+||++|+|++ |..||.+.+..+..+++..+ .+..|
T Consensus       152 ~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~-~~~~p  223 (318)
T 1fot_A          152 FAKYVPDV------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA-GYTPFYDSNTMKTYEKILNA-ELRFP  223 (318)
T ss_dssp             SCEECSSC------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHC-CCCCC
T ss_pred             cceecCCc------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhC-CCCCC
Confidence            99754321      234577889999999998889999999999999999999 99999998888888887776 45566


Q ss_pred             CCCC
Q psy3166         223 ASCN  226 (228)
Q Consensus       223 ~~~~  226 (228)
                      ..++
T Consensus       224 ~~~~  227 (318)
T 1fot_A          224 PFFN  227 (318)
T ss_dssp             TTSC
T ss_pred             CCCC
Confidence            5554


No 34 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.4e-40  Score=274.90  Aligned_cols=221  Identities=43%  Similarity=0.839  Sum_probs=187.1

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|...+....  ....+..||+|.++.........++.+|+++++++.+||||+++
T Consensus        63 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~  140 (382)
T 3tt0_A           63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL  140 (382)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTT--CTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccchhheEeeeEEecCCCeEEEEEEEcccccc--ccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhh
Confidence            4678889999999999999999999987553321  22455679999998776666677899999999999889999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH------------------------------------hcccCCCCcccCCCCC
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE------------------------------------EYLSNNKVVHRDLATR  126 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~------------------------------------~~lh~~~i~H~~lk~~  126 (228)
                      ++++..+ ..++||||+++++|.+++..                                    .|||+++|+||||||+
T Consensus       141 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  220 (382)
T 3tt0_A          141 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR  220 (382)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             eeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcc
Confidence            9998765 48999999999999998742                                    5899999999999999


Q ss_pred             CEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         127 NILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       127 nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      ||+++.++.+||+|||++......... .......++..|+|||++.+..++.++|||||||++|+|++.|..||.+.+.
T Consensus       221 NIll~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~  299 (382)
T 3tt0_A          221 NVLVTEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV  299 (382)
T ss_dssp             GEEECTTCCEEECSCSCCCCSSCCCTT-CCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             eEEEcCCCcEEEcccCccccccccccc-ccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999998755433221 1223345677899999999888999999999999999999879999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCC
Q psy3166         207 CRIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       207 ~~~~~~~~~~~~~~~p~~~~~  227 (228)
                      .++.+.+..+.+++.|..+++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~  320 (382)
T 3tt0_A          300 EELFKLLKEGHRMDKPSNCTN  320 (382)
T ss_dssp             HHHHHHHHTTCCCCCCSSCCH
T ss_pred             HHHHHHHHcCCCCCCCccCCH
Confidence            999999999989988888875


No 35 
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=7.5e-41  Score=293.98  Aligned_cols=216  Identities=32%  Similarity=0.657  Sum_probs=177.4

Q ss_pred             CCCCCCceeeee-eeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           5 CGYPPERLILGE-VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         5 ~~~~~~~~~~~~-~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      +.+..+++.+.+ .||+|+||.||+|.+...       ..+..||+|.++........+.+.+|+++|+++ +||||+++
T Consensus       330 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~-------~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l  401 (613)
T 2ozo_A          330 LFLKRDNLLIADIELGCGNFGSVRQGVYRMR-------KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRL  401 (613)
T ss_dssp             SBCCTTSEEEEEEEEEECSSSEEEEEEEECS-------SCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCE
T ss_pred             eeccccceeEcCcEEecCCCcEEEEEEEecC-------CCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeE
Confidence            345667777776 899999999999986432       234569999998664444567889999999999 99999999


Q ss_pred             eeEEEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++..+.+++||||+++|+|.+++..                     .|||+++|+||||||+|||++.++.+||+|||
T Consensus       402 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFG  481 (613)
T 2ozo_A          402 IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFG  481 (613)
T ss_dssp             EEEEESSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCS
T ss_pred             EEEeccCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeecc
Confidence            999988889999999999999998743                     69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      +++.+..............++..|+|||++....++.++|||||||++|||++.|..||.+.+..++.+.+..+.+++.|
T Consensus       482 la~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p  561 (613)
T 2ozo_A          482 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP  561 (613)
T ss_dssp             TTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCC
T ss_pred             CcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            99765433221111222344567999999998889999999999999999997799999999999999999999999999


Q ss_pred             CCCCCC
Q psy3166         223 ASCNEQ  228 (228)
Q Consensus       223 ~~~~~~  228 (228)
                      .+||++
T Consensus       562 ~~~~~~  567 (613)
T 2ozo_A          562 PECPPE  567 (613)
T ss_dssp             TTCCHH
T ss_pred             CcCCHH
Confidence            999853


No 36 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=3.1e-40  Score=271.68  Aligned_cols=208  Identities=23%  Similarity=0.384  Sum_probs=169.0

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||.||+|+.         ..+++.||+|.+++..  .......+.+|..+++++.+||||+++
T Consensus         5 ~~~~~~y~~~~~lG~G~fg~V~~~~~---------~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l   75 (345)
T 3a8x_A            5 PLGLQDFDLLRVIGRGSYAKVLLVRL---------KKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL   75 (345)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             CCchhheEEEEEEEecCCeEEEEEEE---------CCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeE
Confidence            46678999999999999999999984         4455679999987542  344456778899999988789999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++.... +++||||+++|+|.+++..                    .|||+++|+||||||+||+++.++.+||+|||
T Consensus        76 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG  155 (345)
T 3a8x_A           76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG  155 (345)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGG
T ss_pred             EEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEecc
Confidence            99987644 8899999999999988764                    69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---------CHHHHHHHH
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI---------PLCRIVHYL  213 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~---------~~~~~~~~~  213 (228)
                      +++......   .......||..|+|||++.+..++.++|+||+||++|+|++ |..||...         ....+.+.+
T Consensus       156 ~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~i  231 (345)
T 3a8x_A          156 MCKEGLRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRSPFDIVGSSDNPDQNTEDYLFQVI  231 (345)
T ss_dssp             GCBCSCCTT---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTTTC-------CHHHHHHHH
T ss_pred             ccccccCCC---CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHh-CCCCcCCcccccccccccHHHHHHHH
Confidence            987532221   12334678899999999998889999999999999999999 99999752         223344555


Q ss_pred             HcCCCCCCCCCCCC
Q psy3166         214 STGYRMERPASCNE  227 (228)
Q Consensus       214 ~~~~~~~~p~~~~~  227 (228)
                      ..+ ++..|..+++
T Consensus       232 ~~~-~~~~p~~~s~  244 (345)
T 3a8x_A          232 LEK-QIRIPRSLSV  244 (345)
T ss_dssp             HHC-CCCCCTTSCH
T ss_pred             HcC-CCCCCCCCCH
Confidence            554 5666666553


No 37 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=7.5e-41  Score=278.08  Aligned_cols=217  Identities=35%  Similarity=0.634  Sum_probs=169.8

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      ...+..++|++.+.||+|+||.||+|+....      ...+..||+|.++..........+.+|+.+++++ +||||+++
T Consensus        39 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~------~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~  111 (373)
T 2qol_A           39 AKELDATNISIDKVVGAGEFGEVCSGRLKLP------SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRL  111 (373)
T ss_dssp             SCBCCGGGCCCCEEEEECSSSEEEEC-CBCT------TSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCE
T ss_pred             HhhcCHhhceeeeEEeeCCCeEEEEEEEecC------CCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeE
Confidence            3457778999999999999999999985421      2345569999998765666667899999999999 99999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++... ..++||||+++++|.+++..                     .|||+++|+||||||+||+++.++.+||+||
T Consensus       112 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  191 (373)
T 2qol_A          112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF  191 (373)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred             EEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcC
Confidence            9998764 48899999999999999864                     6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |++.................++..|+|||++....++.++|+||||+++|+|++.|..||...+..++.+.+..+.+++.
T Consensus       192 g~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~  271 (373)
T 2qol_A          192 GLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP  271 (373)
T ss_dssp             ----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCC
T ss_pred             ccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            99876543321111111223456799999999888999999999999999999779999999999999999998888888


Q ss_pred             CCCCCC
Q psy3166         222 PASCNE  227 (228)
Q Consensus       222 p~~~~~  227 (228)
                      |..+|+
T Consensus       272 ~~~~~~  277 (373)
T 2qol_A          272 PMDCPA  277 (373)
T ss_dssp             CTTCBH
T ss_pred             CccccH
Confidence            877764


No 38 
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=3.3e-40  Score=263.75  Aligned_cols=215  Identities=35%  Similarity=0.670  Sum_probs=181.2

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+++..++|++.+.||+|+||.||+|++...      ..++..||+|.++........+.+.+|+.+++++ +||||+++
T Consensus         6 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~   78 (281)
T 3cc6_A            6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNH------KGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKL   78 (281)
T ss_dssp             CCSCCGGGEEEEEEEEECSSSEEEEEEEECT------TCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCE
T ss_pred             cceecccceEEEEEEEecCCeeEEEeEEcCC------CCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceE
Confidence            4688999999999999999999999986542      2345569999998766666677889999999999 99999999


Q ss_pred             eeEEEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++..+..+++||++++++|.+++..                     .|||+++|+|+||||+||+++.++.+||+|||
T Consensus        79 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  158 (281)
T 3cc6_A           79 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG  158 (281)
T ss_dssp             EEEECSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCC
T ss_pred             EEEEcCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccC
Confidence            999888888999999999999998864                     59999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      ++.........  ......++..|+|||.+.+..++.++|+||||+++|+|++.|..||......+....+..+.+++.|
T Consensus       159 ~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~  236 (281)
T 3cc6_A          159 LSRYIEDEDYY--KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKP  236 (281)
T ss_dssp             GGGCC-----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCC
T ss_pred             CCccccccccc--ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCC
Confidence            98755332211  1223455678999999988889999999999999999997699999998888888888888888888


Q ss_pred             CCCCC
Q psy3166         223 ASCNE  227 (228)
Q Consensus       223 ~~~~~  227 (228)
                      ..+|+
T Consensus       237 ~~~~~  241 (281)
T 3cc6_A          237 DLCPP  241 (281)
T ss_dssp             TTCCH
T ss_pred             CCCCH
Confidence            87764


No 39 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=3.3e-40  Score=269.59  Aligned_cols=212  Identities=26%  Similarity=0.384  Sum_probs=165.5

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC---CHHHHHHHHHHHHHHHhcCCCCce
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA---DAKTYDKFLKEINLMKDVGKHDHI   80 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~h~ni   80 (228)
                      +..+..++|++.+.||+|+||.||+++...      +..++..||+|.++...   .......+.+|+.+|+++ +||||
T Consensus        11 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~------~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i   83 (327)
T 3a62_A           11 PEKIRPECFELLRVLGKGGYGKVFQVRKVT------GANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFI   83 (327)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEECS------STTTTCEEEEEEECCC--------------HHHHHHHC-CCTTB
T ss_pred             CCCCCHHHeEEEEEEEeCCCEEEEEEEEec------cCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCc
Confidence            346788999999999999999999998532      23456679999987542   122345577899999999 99999


Q ss_pred             EEeeeEEEcC-ceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEe
Q psy3166          81 VSFIGCCYKD-ELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKIS  139 (228)
Q Consensus        81 ~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~  139 (228)
                      +++++++..+ ..++||||+++++|.+++..                    .|||++||+||||||+||+++.++.+||+
T Consensus        84 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~  163 (327)
T 3a62_A           84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLT  163 (327)
T ss_dssp             CCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEEC
T ss_pred             cceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEE
Confidence            9999998764 48999999999999988764                    69999999999999999999999999999


Q ss_pred             eccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Q psy3166         140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRM  219 (228)
Q Consensus       140 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~  219 (228)
                      |||++........   ......||..|+|||++.+..++.++|+||||+++|+|++ |..||.+.+..+..+.+.++ .+
T Consensus       164 Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~-~~  238 (327)
T 3a62_A          164 DFGLCKESIHDGT---VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT-GAPPFTGENRKKTIDKILKC-KL  238 (327)
T ss_dssp             CCSCC-------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHT-CC
T ss_pred             eCCcccccccCCc---cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhC-CC
Confidence            9999874432211   1223567889999999998889999999999999999999 99999998888888887776 55


Q ss_pred             CCCCCCCC
Q psy3166         220 ERPASCNE  227 (228)
Q Consensus       220 ~~p~~~~~  227 (228)
                      ..|..+++
T Consensus       239 ~~p~~~~~  246 (327)
T 3a62_A          239 NLPPYLTQ  246 (327)
T ss_dssp             CCCTTSCH
T ss_pred             CCCCCCCH
Confidence            66666553


No 40 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=1e-40  Score=275.06  Aligned_cols=203  Identities=24%  Similarity=0.382  Sum_probs=172.2

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      ...++|++.+.||+|+||.||+|+.         ..++..||+|.++...  .......+.+|+.+|+++ +||||++++
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~  107 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKH---------KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE  107 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEE---------TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEE---------CCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence            4568999999999999999999984         3455679999986432  112245678899999999 999999999


Q ss_pred             eEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          85 GCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        85 ~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      +++.... +++||||+++++|.+++..                    .|||++||+||||||+||+++.++.+||+|||+
T Consensus       108 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~  187 (350)
T 1rdq_E          108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF  187 (350)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEccccc
Confidence            9987654 8899999999999998864                    699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPA  223 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~  223 (228)
                      ++.....      .....||+.|+|||++.+..++.++|+|||||++|+|++ |..||.+.+..++.+.+..+ .+..|.
T Consensus       188 a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~  259 (350)
T 1rdq_E          188 AKRVKGR------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG-KVRFPS  259 (350)
T ss_dssp             CEECSSC------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC-CCCCCT
T ss_pred             ceeccCC------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhh-CCCCCCCCCHHHHHHHHHcC-CCCCCC
Confidence            8754322      234567889999999998889999999999999999999 99999999888888888887 566776


Q ss_pred             CCCC
Q psy3166         224 SCNE  227 (228)
Q Consensus       224 ~~~~  227 (228)
                      .+++
T Consensus       260 ~~~~  263 (350)
T 1rdq_E          260 HFSS  263 (350)
T ss_dssp             TCCH
T ss_pred             CCCH
Confidence            6654


No 41 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=3.6e-40  Score=270.37  Aligned_cols=218  Identities=39%  Similarity=0.691  Sum_probs=183.5

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      ++.++.++|++.+.||+|+||.||+|+..+..    ...++..||+|.++..........+.+|+.+++++ +||||+++
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~  115 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLL----PYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKL  115 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSS----TTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCE
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcC----CCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEE
Confidence            45788899999999999999999999875432    22455779999998766666667889999999999 99999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH--------------------------------------------hcccCCCC
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE--------------------------------------------EYLSNNKV  118 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~--------------------------------------------~~lh~~~i  118 (228)
                      ++++..+ ..+++|||+++++|.+++..                                            .|||+++|
T Consensus       116 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i  195 (343)
T 1luf_A          116 LGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF  195 (343)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9998764 48899999999999988742                                            58999999


Q ss_pred             cccCCCCCCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCC
Q psy3166         119 VHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGA  198 (228)
Q Consensus       119 ~H~~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~  198 (228)
                      +|+||||+||+++.++.+||+|||++......... .......++..|+|||.+.+..++.++|+||||+++|+|++.|.
T Consensus       196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~  274 (343)
T 1luf_A          196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL  274 (343)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-C----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             ecCCCCcceEEECCCCeEEEeecCCCcccccCccc-cccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCC
Confidence            99999999999999999999999998755433221 12233566788999999998889999999999999999997799


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q psy3166         199 NPYPHIPLCRIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       199 ~pf~~~~~~~~~~~~~~~~~~~~p~~~~~  227 (228)
                      .||.+.+..++...+..+..++.|..+|+
T Consensus       275 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (343)
T 1luf_A          275 QPYYGMAHEEVIYYVRDGNILACPENCPL  303 (343)
T ss_dssp             CTTTTSCHHHHHHHHHTTCCCCCCTTCCH
T ss_pred             CcCCCCChHHHHHHHhCCCcCCCCCCCCH
Confidence            99999999999999999988888888875


No 42 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=1.1e-40  Score=283.46  Aligned_cols=209  Identities=36%  Similarity=0.616  Sum_probs=175.7

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|.+.++          ..||+|.++....  ..+.+.+|+++|+++ +||||+++
T Consensus       178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~----------~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hp~iv~~  244 (452)
T 1fmk_A          178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGT----------TRVAIKTLKPGTM--SPEAFLQEAQVMKKL-RHEKLVQL  244 (452)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETTT----------EEEEEEECCTTSS--CHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred             ccccChhHceeeeeecCCCCeEEEEEEECCC----------ceEEEEEeccCCC--CHHHHHHHHHHHHhC-CCCCEeeE
Confidence            4678999999999999999999999986432          3499999976532  235788999999999 99999999


Q ss_pred             eeEEEcCceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKDELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++..+..++||||+++|+|.+++..                      .|||+++|+||||||+|||++.++.+||+||
T Consensus       245 ~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~Df  324 (452)
T 1fmk_A          245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF  324 (452)
T ss_dssp             EEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred             EEEEcCCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCC
Confidence            999888789999999999999999853                      5999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |++.........  ......++..|+|||++....++.++|+||||+++|+|++.|..||.+.+..++...+..+.+++.
T Consensus       325 G~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~  402 (452)
T 1fmk_A          325 GLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC  402 (452)
T ss_dssp             CTTC----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC
T ss_pred             ccceecCCCcee--cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            999765432211  112344567899999999888999999999999999999878999999999999999999999999


Q ss_pred             CCCCCC
Q psy3166         222 PASCNE  227 (228)
Q Consensus       222 p~~~~~  227 (228)
                      |..||+
T Consensus       403 ~~~~~~  408 (452)
T 1fmk_A          403 PPECPE  408 (452)
T ss_dssp             CTTSCH
T ss_pred             CCCCCH
Confidence            998885


No 43 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=2.1e-40  Score=275.18  Aligned_cols=206  Identities=27%  Similarity=0.405  Sum_probs=162.5

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHH-HhcCCCCceEE
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLM-KDVGKHDHIVS   82 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l-~~l~~h~ni~~   82 (228)
                      .+..++|++.+.||+|+||+||+|+..         .++..||+|.+++..  .......+.+|..++ +.+ +||||++
T Consensus        34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~---------~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~-~hp~Iv~  103 (373)
T 2r5t_A           34 HAKPSDFHFLKVIGKGSFGKVLLARHK---------AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVG  103 (373)
T ss_dssp             TCCGGGEEEEEEEECCTTCEEEEEEET---------TTCCEEEEEEEEGGGBC-------------CCBCCC-CCTTBCC
T ss_pred             CCChhheEEEEEEeeCCCeEEEEEEEc---------CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhC-CCCCCCC
Confidence            356789999999999999999999843         445679999987542  222334566777764 556 9999999


Q ss_pred             eeeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          83 FIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        83 ~~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      +++++.... +++||||+++|+|.+++..                    .|||++||+||||||+|||++.++.+||+||
T Consensus       104 l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DF  183 (373)
T 2r5t_A          104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDF  183 (373)
T ss_dssp             EEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeC
Confidence            999987754 8899999999999988764                    6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |+++......   .......||+.|+|||++.+..++.++|+|||||++|+|++ |..||.+.+..++.+.+..+ ....
T Consensus       184 G~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-G~~Pf~~~~~~~~~~~i~~~-~~~~  258 (373)
T 2r5t_A          184 GLCKENIEHN---STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY-GLPPFYSRNTAEMYDNILNK-PLQL  258 (373)
T ss_dssp             CBCGGGBCCC---CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCCSBHHHHHHHHHHS-CCCC
T ss_pred             ccccccccCC---CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhc-ccCC
Confidence            9987533221   12334678889999999998889999999999999999999 99999999888888888776 5555


Q ss_pred             CCCCC
Q psy3166         222 PASCN  226 (228)
Q Consensus       222 p~~~~  226 (228)
                      |..++
T Consensus       259 ~~~~~  263 (373)
T 2r5t_A          259 KPNIT  263 (373)
T ss_dssp             CSSSC
T ss_pred             CCCCC
Confidence            65554


No 44 
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.9e-40  Score=268.32  Aligned_cols=218  Identities=38%  Similarity=0.666  Sum_probs=175.9

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+.+..++|++.+.||+|+||.||+|....+.     ...+..||+|.++..........+.+|+.+++++ +||||+++
T Consensus        38 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~  111 (333)
T 1mqb_A           38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSS-----GKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRL  111 (333)
T ss_dssp             CCBCCTTTEEEEEEEEECSSSEEEEEEEEC--------CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCE
T ss_pred             cccCChHHhhcccEEecCCCeEEEEEEEecCC-----CCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcE
Confidence            45788999999999999999999999865432     2234569999998766666667889999999999 99999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++... ..++|||++++++|.+++..                     .|||+++|+|+||||+||+++.++.+||+||
T Consensus       112 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Df  191 (333)
T 1mqb_A          112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDF  191 (333)
T ss_dssp             EEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred             EEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCC
Confidence            9998764 48899999999999998864                     5899999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |++.................++..|+|||.+....++.++|+||||+++|+|++.|..||.+.+..++...+..+.+++.
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~  271 (333)
T 1mqb_A          192 GLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT  271 (333)
T ss_dssp             CC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC
T ss_pred             CcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCC
Confidence            99876543322111122234567899999998888999999999999999999779999999999999999999988888


Q ss_pred             CCCCCC
Q psy3166         222 PASCNE  227 (228)
Q Consensus       222 p~~~~~  227 (228)
                      |..+|+
T Consensus       272 ~~~~~~  277 (333)
T 1mqb_A          272 PMDCPS  277 (333)
T ss_dssp             CTTCBH
T ss_pred             cccCCH
Confidence            887764


No 45 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=5.4e-40  Score=266.39  Aligned_cols=208  Identities=34%  Similarity=0.542  Sum_probs=166.6

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      .+.++.++|++.+.||+|+||+||+|++.           +..||+|.+.... .......+.+|+.+++++ +||||++
T Consensus        31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~~-----------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~   98 (309)
T 3p86_A           31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-----------GSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVL   98 (309)
T ss_dssp             -CBCCGGGEEEEEEEEECSSEEEEEEEET-----------TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred             cccCChhHceeeeEeecCCCeEEEEEEEC-----------CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEee
Confidence            35688999999999999999999999752           3459999987553 345556788999999999 8999999


Q ss_pred             eeeEEEcC-ceEEEEecCCCCcHHHHHHH-----------------------hcccCCC--CcccCCCCCCEeecCCCcE
Q psy3166          83 FIGCCYKD-ELRLVVEYCALGDLQSYLRE-----------------------EYLSNNK--VVHRDLATRNILLSSPHVV  136 (228)
Q Consensus        83 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~-----------------------~~lh~~~--i~H~~lk~~nil~~~~~~~  136 (228)
                      +++++... ..++||||+++++|.+++..                       .|||+++  |+||||||+||+++.++.+
T Consensus        99 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~  178 (309)
T 3p86_A           99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTV  178 (309)
T ss_dssp             EEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCE
T ss_pred             EEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcE
Confidence            99998764 48899999999999998753                       5999999  9999999999999999999


Q ss_pred             EEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-c
Q psy3166         137 KISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS-T  215 (228)
Q Consensus       137 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~-~  215 (228)
                      ||+|||++.......   .......||..|+|||++.+..++.++|+||||+++|+|++ |..||.+.+..+....+. .
T Consensus       179 kL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~Pf~~~~~~~~~~~~~~~  254 (309)
T 3p86_A          179 KVCDFGLSRLKASTF---LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT-LQQPWGNLNPAQVVAAVGFK  254 (309)
T ss_dssp             EECCCC--------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHH-CCCTTTTSCHHHHHHHHHHS
T ss_pred             EECCCCCCccccccc---cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhc
Confidence            999999986433221   11234567888999999998889999999999999999999 999999998888876654 5


Q ss_pred             CCCCCCCCCCCC
Q psy3166         216 GYRMERPASCNE  227 (228)
Q Consensus       216 ~~~~~~p~~~~~  227 (228)
                      ..+.+.|..+|+
T Consensus       255 ~~~~~~~~~~~~  266 (309)
T 3p86_A          255 CKRLEIPRNLNP  266 (309)
T ss_dssp             CCCCCCCTTSCH
T ss_pred             CCCCCCCccCCH
Confidence            666777887765


No 46 
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.7e-40  Score=264.30  Aligned_cols=216  Identities=33%  Similarity=0.658  Sum_probs=182.7

Q ss_pred             cCCCCCCceeeee-eeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           4 SCGYPPERLILGE-VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         4 ~~~~~~~~~~~~~-~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      .+.++.++|.+.+ .||+|+||.||+|.+...       ..+..||+|.++........+.+.+|+++++++ +||||++
T Consensus         3 ~~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~   74 (287)
T 1u59_A            3 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMR-------KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVR   74 (287)
T ss_dssp             CCBCCGGGEEEEEEEEECCTTEEEEEEEEC----------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred             cccccHHHhhhhhccccccCceeEEEeEeccC-------CCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeE
Confidence            3567888998887 999999999999975332       234569999998766666677889999999999 9999999


Q ss_pred             eeeEEEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          83 FIGCCYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      +++++..+..+++||++++++|.+++..                     .|||+++|+|+||||+||+++.++.++|+||
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Df  154 (287)
T 1u59_A           75 LIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDF  154 (287)
T ss_dssp             EEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCC
T ss_pred             EEEEecCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcc
Confidence            9999977789999999999999998742                     6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |++.................++..|+|||++.+..++.++|+||||+++|+|++.|..||.+.+..++...+..+.+++.
T Consensus       155 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~  234 (287)
T 1u59_A          155 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC  234 (287)
T ss_dssp             TTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCC
T ss_pred             cceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCC
Confidence            99876544332222233345678899999998888999999999999999999769999999988889999999988888


Q ss_pred             CCCCCC
Q psy3166         222 PASCNE  227 (228)
Q Consensus       222 p~~~~~  227 (228)
                      |..+|+
T Consensus       235 ~~~~~~  240 (287)
T 1u59_A          235 PPECPP  240 (287)
T ss_dssp             CTTCCH
T ss_pred             CCCcCH
Confidence            888875


No 47 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=2.1e-40  Score=281.65  Aligned_cols=204  Identities=42%  Similarity=0.772  Sum_probs=176.1

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|.+.           +..||+|.++...   ..+.+.+|+.+|+++ +||||+++
T Consensus       187 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-----------~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~niv~~  251 (450)
T 1k9a_A          187 GWALNMKELKLLQTIGKGEFGDVMLGDYR-----------GNKVAVKCIKNDA---TAQAFLAEASVMTQL-RHSNLVQL  251 (450)
T ss_dssp             TCBCCGGGEEEEEEEEECSSEEEEEEEET-----------TEEEEEEEESSCT---TSHHHHHHHHHHHTC-CCTTBCCE
T ss_pred             ccccChHHeEEEeeecCcCCeeEEEEEec-----------CCeEEEEEeCCch---HHHHHHHHHHHHHhc-cCCCEEEE
Confidence            47789999999999999999999999753           2369999997653   335788999999999 99999999


Q ss_pred             eeEEEcC--ceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEe
Q psy3166          84 IGCCYKD--ELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKIS  139 (228)
Q Consensus        84 ~~~~~~~--~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~  139 (228)
                      ++++...  .+++||||+++|+|.+++..                      .|||+++|+||||||+|||++.++.+||+
T Consensus       252 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~  331 (450)
T 1k9a_A          252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS  331 (450)
T ss_dssp             EEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEEC
T ss_pred             EEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEe
Confidence            9997654  48999999999999998864                      59999999999999999999999999999


Q ss_pred             eccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Q psy3166         140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRM  219 (228)
Q Consensus       140 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~  219 (228)
                      |||+++......      ....++..|+|||++....++.++|+||||+++|+|+|.|..||.+.+..++...+.++.++
T Consensus       332 DfG~a~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~  405 (450)
T 1k9a_A          332 DFGLTKEASSTQ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM  405 (450)
T ss_dssp             CCTTCEECC------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCC
T ss_pred             eCCCcccccccc------cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            999987432211      12245677999999998889999999999999999998799999999999999999999999


Q ss_pred             CCCCCCCCC
Q psy3166         220 ERPASCNEQ  228 (228)
Q Consensus       220 ~~p~~~~~~  228 (228)
                      +.|..||++
T Consensus       406 ~~p~~~~~~  414 (450)
T 1k9a_A          406 DAPDGCPPA  414 (450)
T ss_dssp             CCCTTCCHH
T ss_pred             CCCCcCCHH
Confidence            999999863


No 48 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=2.8e-40  Score=269.96  Aligned_cols=214  Identities=37%  Similarity=0.702  Sum_probs=173.3

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      +..++|++.+.||+|+||.||+|++..+..     ....+||+|.+...........+.+|+.+++++ +||||++++++
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~   85 (327)
T 3poz_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGI   85 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECC---------CCEEEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEE
T ss_pred             cCHHHcccceEEeeCCCeEEEEEEEcCCCc-----eEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEE
Confidence            567899999999999999999998654321     223457889886554445557788999999999 99999999999


Q ss_pred             EEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166          87 CYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus        87 ~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      +..+..++++|++.+|+|.+++..                     .|||+++|+||||||+||+++.++.+||+|||+++
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~  165 (327)
T 3poz_A           86 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             EESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred             EecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCccee
Confidence            998889999999999999998764                     69999999999999999999999999999999987


Q ss_pred             cccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q psy3166         146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC  225 (228)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~  225 (228)
                      .+....... ......+|..|+|||.+.+..++.++|+|||||++|+|++.|..||.+.+..++...+..+.+++.|..+
T Consensus       166 ~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  244 (327)
T 3poz_A          166 LLGAEEKEY-HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC  244 (327)
T ss_dssp             HHTTTCC--------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTB
T ss_pred             EccCCcccc-cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccC
Confidence            654332211 1223445778999999999899999999999999999998799999999999999999999888888777


Q ss_pred             CC
Q psy3166         226 NE  227 (228)
Q Consensus       226 ~~  227 (228)
                      ++
T Consensus       245 ~~  246 (327)
T 3poz_A          245 TI  246 (327)
T ss_dssp             CH
T ss_pred             CH
Confidence            64


No 49 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=4.7e-41  Score=282.13  Aligned_cols=198  Identities=23%  Similarity=0.339  Sum_probs=164.5

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH--HHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA--KTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||+||+|+..         .++..||+|.+++....  .....+.+|+.+++.+ +||||+++
T Consensus        65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~---------~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l  134 (410)
T 3v8s_A           65 RMKAEDYEVVKVIGRGAFGEVQLVRHK---------STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQL  134 (410)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCE
T ss_pred             ccCccccEEEEEEEcCCCEEEEEEEEC---------CCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeE
Confidence            466789999999999999999999844         44567999998642110  1113467899999999 99999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      ++++.... +++||||+++|+|.+++..                   .|||++||+||||||+|||++.++.+||+|||+
T Consensus       135 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~  214 (410)
T 3v8s_A          135 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT  214 (410)
T ss_dssp             EEEEECSSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccce
Confidence            99987755 8899999999999998764                   699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI----YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~----~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      ++.+......  ......||+.|+|||++....    ++.++|+|||||++|+|++ |..||.+.+..++..++.++
T Consensus       215 a~~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~-G~~Pf~~~~~~~~~~~i~~~  288 (410)
T 3v8s_A          215 CMKMNKEGMV--RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV-GDTPFYADSLVGTYSKIMNH  288 (410)
T ss_dssp             CEECCTTSEE--ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHTH
T ss_pred             eEeeccCCcc--cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHh-CCCCCCCCChhhHHHHHHhc
Confidence            9765433221  123467899999999998655    7789999999999999999 99999999888888887764


No 50 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=2.1e-40  Score=273.41  Aligned_cols=220  Identities=41%  Similarity=0.771  Sum_probs=181.4

Q ss_pred             ccCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         3 ~~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      .+|.++.++|++.+.||+|+||.||+|++.+..    +..+++.||+|.++..........+.+|++++.++.+||||++
T Consensus        15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGID----KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSS----STTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccccccccceeeceeecCCCCceEEEEEecccc----ccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            357799999999999999999999999865532    4456778999999876666666789999999999988999999


Q ss_pred             eeeEEEcC-c-eEEEEecCCCCcHHHHHHH--------------------------------------------------
Q psy3166          83 FIGCCYKD-E-LRLVVEYCALGDLQSYLRE--------------------------------------------------  110 (228)
Q Consensus        83 ~~~~~~~~-~-~~lv~e~~~~~~L~~~l~~--------------------------------------------------  110 (228)
                      +++++... . .+++|||+++|+|.+++..                                                  
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            99998763 3 8899999999999887631                                                  


Q ss_pred             ------------------------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCccccccccccc
Q psy3166         111 ------------------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQ  154 (228)
Q Consensus       111 ------------------------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~~  154 (228)
                                                          .|||+++|+||||||+||+++.++.+||+|||++..+.......
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  250 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV  250 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence                                                58999999999999999999999999999999987553332211


Q ss_pred             CCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCC
Q psy3166         155 NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC-RIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       155 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~-~~~~~~~~~~~~~~p~~~~~  227 (228)
                       ......+|..|+|||++.+..++.++||||||+++|+|+|.|..||.+.... .+...+..+.+++.|..+++
T Consensus       251 -~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (359)
T 3vhe_A          251 -RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP  323 (359)
T ss_dssp             -EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCH
T ss_pred             -hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCH
Confidence             1223456778999999998889999999999999999997699999987654 44666777878888877764


No 51 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.9e-40  Score=285.04  Aligned_cols=210  Identities=40%  Similarity=0.774  Sum_probs=180.3

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|++.         .++..||+|.++....  ..+.+.+|+.+|+++ +||||+++
T Consensus       214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~---------~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~l  281 (495)
T 1opk_A          214 KWEMERTDITMKHKLGGGQYGEVYEGVWK---------KYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEI-KHPNLVQL  281 (495)
T ss_dssp             CCBCCGGGEEEEEESGGGTTSSEEEEEEG---------GGTEEEEEEECCSSSS--CHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred             ccccCHHHceeeeEecCCCCeEEEEEEEc---------CCCeEEEEEEecCccc--chHHHHHHHHHHHhc-CCCCEeeE
Confidence            46788899999999999999999999853         3456799999976532  246788999999999 99999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEee
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISD  140 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~d  140 (228)
                      ++++... .+++||||+++|+|.+++..                      .|||+++|+||||||+|||++.++.+||+|
T Consensus       282 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~D  361 (495)
T 1opk_A          282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVAD  361 (495)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECC
T ss_pred             EEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEee
Confidence            9998764 48999999999999999864                      599999999999999999999999999999


Q ss_pred             ccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Q psy3166         141 FGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRME  220 (228)
Q Consensus       141 fg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~  220 (228)
                      ||+++.+......  ......++..|+|||++....++.++||||||+++|+|++.|..||.+.+..++.+.+..+.+++
T Consensus       362 FG~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~  439 (495)
T 1opk_A          362 FGLSRLMTGDTYT--AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME  439 (495)
T ss_dssp             TTCEECCTTCCEE--CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC
T ss_pred             cccceeccCCcee--ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            9998765332211  12234456789999999888899999999999999999987999999999999999999999999


Q ss_pred             CCCCCCC
Q psy3166         221 RPASCNE  227 (228)
Q Consensus       221 ~p~~~~~  227 (228)
                      .|..||+
T Consensus       440 ~~~~~~~  446 (495)
T 1opk_A          440 RPEGCPE  446 (495)
T ss_dssp             CCTTCCH
T ss_pred             CCCCCCH
Confidence            9999885


No 52 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=9.4e-40  Score=264.68  Aligned_cols=218  Identities=50%  Similarity=0.895  Sum_probs=183.5

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|......    ...++..||+|.++..........+.+|+.+++++ +||||+++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~   91 (314)
T 2ivs_A           17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLK----GRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKL   91 (314)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEETGG----GCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCE
T ss_pred             ccccchhheeeeeeecccCCeeEEEEEEeccC----cccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeE
Confidence            46788999999999999999999999853321    23455679999998766666677889999999999 99999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH--------------------------------------------hcccCCCC
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE--------------------------------------------EYLSNNKV  118 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~--------------------------------------------~~lh~~~i  118 (228)
                      ++++..+ ..+++|||+++++|.+++..                                            .|||+++|
T Consensus        92 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  171 (314)
T 2ivs_A           92 YGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKL  171 (314)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            9998764 48899999999999988741                                            58999999


Q ss_pred             cccCCCCCCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCC
Q psy3166         119 VHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGA  198 (228)
Q Consensus       119 ~H~~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~  198 (228)
                      +|+||||+||+++.++.+||+|||++.......... ......++..|+|||.+.+..++.++|+||+|+++|+|++.|.
T Consensus       172 vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~  250 (314)
T 2ivs_A          172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG  250 (314)
T ss_dssp             ECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEE-CSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             cccccchheEEEcCCCCEEEccccccccccccccce-eccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999987554332211 1233456778999999988889999999999999999997799


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCCCCCC
Q psy3166         199 NPYPHIPLCRIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       199 ~pf~~~~~~~~~~~~~~~~~~~~p~~~~~  227 (228)
                      .||.+.+..++.+.+..+.+++.|..+|+
T Consensus       251 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (314)
T 2ivs_A          251 NPYPGIPPERLFNLLKTGHRMERPDNCSE  279 (314)
T ss_dssp             CSSTTCCGGGHHHHHHTTCCCCCCTTCCH
T ss_pred             CCCCCCCHHHHHHHhhcCCcCCCCccCCH
Confidence            99999998888888999888888888775


No 53 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=7.9e-40  Score=263.95  Aligned_cols=198  Identities=30%  Similarity=0.511  Sum_probs=165.6

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      +.+-+.++|++.+.||+|+||+||+|.         +..++..||+|.+...... ..+.+.+|+.+++++ +||||+++
T Consensus        14 ~~~~~~~~y~~~~~lg~G~~g~V~~~~---------~~~~~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l-~hp~iv~~   82 (297)
T 3fxz_A           14 SVGDPKKKYTRFEKIGQGASGTVYTAM---------DVATGQEVAIRQMNLQQQP-KKELIINEILVMREN-KNPNIVNY   82 (297)
T ss_dssp             BSSCGGGTBCCCEEEEEETTEEEEEEE---------BTTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred             CcCChhhceeeeeeeccCCCeEEEEEE---------ECCCCcEEEEEEeeccccc-HHHHHHHHHHHHhcC-CCCCCCeE
Confidence            456677899999999999999999998         4445667999998644222 235678999999999 99999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      ++++..+ ..++||||+.+++|.+++..                   .|||++||+||||||+||+++.++.+||+|||+
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~  162 (297)
T 3fxz_A           83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF  162 (297)
T ss_dssp             EEEEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred             eEEEEECCEEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCC
Confidence            9988764 48899999999999998764                   699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      +........   ......||..|+|||.+.+..++.++|+||+||++|+|++ |..||.+.+..+....+...
T Consensus       163 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~~~~~  231 (297)
T 3fxz_A          163 CAQITPEQS---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIATN  231 (297)
T ss_dssp             CEECCSTTC---CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHH
T ss_pred             ceecCCccc---ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhC
Confidence            875543321   2234578889999999998899999999999999999999 99999998776665554443


No 54 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=8.7e-40  Score=263.05  Aligned_cols=216  Identities=36%  Similarity=0.628  Sum_probs=171.1

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      +..+..++|++.+.||+|+||.||+|++...     +..++..||+|.+... .....+.+.+|+.+++++ +||||+++
T Consensus         4 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~   76 (295)
T 3ugc_A            4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPL-----QDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSL-QHDNIVKY   76 (295)
T ss_dssp             --CCCGGGEEEEEEEEECSSEEEEEEEECTT-----CSSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTC-CCTTBCCE
T ss_pred             cCcCCHHHhhhhheeeccCCEEEEEEEEecc-----cCCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCEeeE
Confidence            3467889999999999999999999986432     3456678999998754 345557788999999999 89999999


Q ss_pred             eeEEEc---CceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEe
Q psy3166          84 IGCCYK---DELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKIS  139 (228)
Q Consensus        84 ~~~~~~---~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~  139 (228)
                      ++++..   ..+++||||+++++|.+++..                     .|||+++|+|+||||+||+++.++.+||+
T Consensus        77 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~  156 (295)
T 3ugc_A           77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG  156 (295)
T ss_dssp             EEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred             EEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEc
Confidence            998854   348899999999999998864                     69999999999999999999999999999


Q ss_pred             eccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------------
Q psy3166         140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC------------  207 (228)
Q Consensus       140 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~------------  207 (228)
                      |||++.................++..|+|||.+.+..++.++|+||||+++|+|++ |..||......            
T Consensus       157 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~  235 (295)
T 3ugc_A          157 DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPPAEFMRMIGNDKQGQ  235 (295)
T ss_dssp             CCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHH-TTCTTCSHHHHHHHHHCTTCCTH
T ss_pred             cCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHh-cccccCCChHHHHhhhcCccccc
Confidence            99999765443322222333456677999999998889999999999999999999 99988764321            


Q ss_pred             ----HHHHHHHcCCCCCCCCCCCC
Q psy3166         208 ----RIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       208 ----~~~~~~~~~~~~~~p~~~~~  227 (228)
                          .+...+..+.+++.|..||+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~  259 (295)
T 3ugc_A          236 MIVFHLIELLKNNGRLPRPDGCPD  259 (295)
T ss_dssp             HHHHHHHHHHHTTCCCCCCTTCCH
T ss_pred             hhHHHHHHHHhccCcCCCCcCcCH
Confidence                34556777878888888875


No 55 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=4e-40  Score=268.74  Aligned_cols=217  Identities=34%  Similarity=0.628  Sum_probs=177.1

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      --+..++|++.+.||+|+||+||+|++..+..     ....+||+|.+...........+.+|+.+++++ +||||++++
T Consensus         8 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-----~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~   81 (325)
T 3kex_A            8 RIFKETELRKLKVLGSGVFGTVHKGVWIPEGE-----SIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLL   81 (325)
T ss_dssp             CBCCTTTEEEEEEEECCSSCEEEEEEECCTTC-----SCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEE
T ss_pred             hhcCHhHceeeeeeeecCCceEEEEEEcCCCc-----eEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEE
Confidence            35678899999999999999999998654331     223457888775443222334566899999999 999999999


Q ss_pred             eEEEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          85 GCCYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      +++..+..++||||+.+++|.+++..                     .|||+++|+||||||+||+++.++.+||+|||+
T Consensus        82 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~  161 (325)
T 3kex_A           82 GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGV  161 (325)
T ss_dssp             EEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSG
T ss_pred             EEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCc
Confidence            99888889999999999999998753                     699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPA  223 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~  223 (228)
                      ++.+...... .......++..|+|||.+....++.++|+||||+++|+|++.|..||.+....++...+..+.+++.|.
T Consensus       162 a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  240 (325)
T 3kex_A          162 ADLLPPDDKQ-LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQ  240 (325)
T ss_dssp             GGGSCCCTTC-CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCT
T ss_pred             ccccCccccc-ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCC
Confidence            9765433211 112334566789999999988899999999999999999987999999998888999999998888888


Q ss_pred             CCCCC
Q psy3166         224 SCNEQ  228 (228)
Q Consensus       224 ~~~~~  228 (228)
                      .++++
T Consensus       241 ~~~~~  245 (325)
T 3kex_A          241 ICTID  245 (325)
T ss_dssp             TBCTT
T ss_pred             cCcHH
Confidence            88764


No 56 
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=3.7e-40  Score=290.44  Aligned_cols=214  Identities=39%  Similarity=0.674  Sum_probs=175.3

Q ss_pred             CCCCCceeeee-eeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGE-VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~-~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .++.+.+.+.. .||+|+||+||+|.+..       ..++..||+|.++... .......+.+|+++|+++ +||||+++
T Consensus       364 ~~~~~~~~l~~~~LG~G~fG~Vy~~~~~~-------~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l  435 (635)
T 4fl3_A          364 YLDRKLLTLEDKELGSGNFGTVKKGYYQM-------KKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRM  435 (635)
T ss_dssp             BCCGGGEEEEEEEEEECSSEEEEEEEEEC-------SSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred             cccchhccccCCEeccCCCEEEEEEEEcC-------CCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeE
Confidence            44555565544 89999999999996432       3355679999987542 334457789999999999 99999999


Q ss_pred             eeEEEcCceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          84 IGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      ++++..+..++||||+.+|+|.+++..                    .|||+++|+||||||+|||++.++.+||+|||+
T Consensus       436 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGl  515 (635)
T 4fl3_A          436 IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL  515 (635)
T ss_dssp             EEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTH
T ss_pred             EEEEecCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCC
Confidence            999988889999999999999999864                    699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPA  223 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~  223 (228)
                      ++.+..............++..|+|||++....++.++|||||||++|+|++.|..||.+.+..++.+.+..+.+++.|.
T Consensus       516 a~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~  595 (635)
T 4fl3_A          516 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA  595 (635)
T ss_dssp             HHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT
T ss_pred             ccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence            87654433222222334556789999999988899999999999999999977999999999999999999999999999


Q ss_pred             CCCC
Q psy3166         224 SCNE  227 (228)
Q Consensus       224 ~~~~  227 (228)
                      +||+
T Consensus       596 ~~~~  599 (635)
T 4fl3_A          596 GCPR  599 (635)
T ss_dssp             TCCH
T ss_pred             CCCH
Confidence            9885


No 57 
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=2.3e-39  Score=265.11  Aligned_cols=221  Identities=43%  Similarity=0.848  Sum_probs=183.8

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|.+.....  ....++..||+|.++..........+.+|+.+++++.+||||+++
T Consensus        29 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~--~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  106 (334)
T 2pvf_A           29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDK--DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL  106 (334)
T ss_dssp             TTBCCGGGEEEEEEEEECSSCEEEEEEETTCST--TCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccCCHhHeEEeeEEeecCceeEEEeEeccccc--cccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeE
Confidence            467899999999999999999999998754321  123456679999998766666677889999999999889999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH------------------------------------hcccCCCCcccCCCCC
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE------------------------------------EYLSNNKVVHRDLATR  126 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~------------------------------------~~lh~~~i~H~~lk~~  126 (228)
                      ++++..+ ..++|||++++++|.+++..                                    .|||+++|+|+||||+
T Consensus       107 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  186 (334)
T 2pvf_A          107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR  186 (334)
T ss_dssp             EEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             EEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccc
Confidence            9998764 48899999999999988741                                    5899999999999999


Q ss_pred             CEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         127 NILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       127 nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      ||+++.++.+||+|||++.......... ......++..|+|||++.+..++.++|+||||+++|+|++.|..||.+.+.
T Consensus       187 NIll~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  265 (334)
T 2pvf_A          187 NVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV  265 (334)
T ss_dssp             GEEECTTCCEEECCCTTCEECTTTSSEE-CCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             eEEEcCCCCEEEcccccccccccccccc-ccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence            9999999999999999987554332211 122345567899999998888999999999999999999879999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCC
Q psy3166         207 CRIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       207 ~~~~~~~~~~~~~~~p~~~~~  227 (228)
                      .++...+..+.+++.|..+|+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~  286 (334)
T 2pvf_A          266 EELFKLLKEGHRMDKPANCTN  286 (334)
T ss_dssp             HHHHHHHHHTCCCCCCTTCCH
T ss_pred             HHHHHHHhcCCCCCCCccCCH
Confidence            999989999888888888764


No 58 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=2.9e-40  Score=279.39  Aligned_cols=197  Identities=24%  Similarity=0.362  Sum_probs=163.2

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH--HHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA--KTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||+||+|+..         .+++.||+|.+++....  .....+.+|..++..+ +||||+++
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~---------~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l  139 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVKLK---------NADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTL  139 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEET---------TTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCE
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEEEc---------CCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEE
Confidence            356789999999999999999999843         45567999998643111  1112367899999999 99999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++..+. +++||||+++|+|.+++..                     .|||+++|+||||||+|||++.++.+||+||
T Consensus       140 ~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DF  219 (437)
T 4aw2_A          140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADF  219 (437)
T ss_dssp             EEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             EEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcch
Confidence            99987754 8899999999999999864                     5999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLV-----SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      |+++.+.......  .....||+.|+|||++.     ...++.++|||||||++|+|++ |..||.+.+..++..++..
T Consensus       220 Gla~~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~  295 (437)
T 4aw2_A          220 GSCLKLMEDGTVQ--SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY-GETPFYAESLVETYGKIMN  295 (437)
T ss_dssp             TTCEECCTTSCEE--CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHT
T ss_pred             hhhhhcccCCCcc--cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHh-CCCCCCCCChhHHHHhhhh
Confidence            9997554332211  22357899999999987     4568999999999999999999 9999999988888877765


No 59 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.1e-39  Score=259.09  Aligned_cols=209  Identities=33%  Similarity=0.646  Sum_probs=176.6

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|.+.+          +..||+|.+......  .+++.+|+.+++++ +||||+++
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~h~~i~~~   70 (269)
T 4hcu_A            4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLN----------KDKVAIKTIREGAMS--EEDFIEEAEVMMKL-SHPKLVQL   70 (269)
T ss_dssp             -CBCCGGGEEEEEEEEECSSCEEEEEEETT----------TEEEEEEEECTTSBC--HHHHHHHHHHHHTC-CCTTBCCE
T ss_pred             cEEeChhhceeeheecCCCccEEEEEEecC----------CCeEEEEEecccccC--HHHHHHHHHHHHhC-CCCCEeeE
Confidence            578999999999999999999999998533          235999998755322  25688999999999 89999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++..+ ..+++|||+++++|.+++..                     .|||+++|+|+||||+||+++.++.++|+||
T Consensus        71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Df  150 (269)
T 4hcu_A           71 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDF  150 (269)
T ss_dssp             EEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCT
T ss_pred             EEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccc
Confidence            9998764 48899999999999998853                     6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |++.........  ......++..|+|||.+....++.++|+||+|+++|+|++.|..||...+..++...+..+.++..
T Consensus       151 g~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~  228 (269)
T 4hcu_A          151 GMTRFVLDDQYT--SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK  228 (269)
T ss_dssp             TGGGGBCCHHHH--STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC
T ss_pred             cccccccccccc--cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCC
Confidence            998755433211  122345567899999998888999999999999999999878999999999999999999888888


Q ss_pred             CCCCCC
Q psy3166         222 PASCNE  227 (228)
Q Consensus       222 p~~~~~  227 (228)
                      |..+++
T Consensus       229 ~~~~~~  234 (269)
T 4hcu_A          229 PRLAST  234 (269)
T ss_dssp             CTTSCH
T ss_pred             CCcCCH
Confidence            877654


No 60 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=1.6e-39  Score=261.74  Aligned_cols=199  Identities=24%  Similarity=0.367  Sum_probs=160.6

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC--CCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      -.++|++.+.||+|+||.||+|+.         ..++..||+|.+...  ........+.+|+.+++++ +||||+++++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~   78 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAED---------TILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMID   78 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEE---------TTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEE
T ss_pred             hhccEEEEEEEccCCCEEEEEEEE---------CCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEE
Confidence            347899999999999999999984         345567999988543  3445567889999999999 9999999999


Q ss_pred             EEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          86 CCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        86 ~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      ++..+. .+++|||+++++|.+++..                    .|||+++|+||||||+||+++.++.+||+|||++
T Consensus        79 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~  158 (294)
T 4eqm_A           79 VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA  158 (294)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSS
T ss_pred             eeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCc
Confidence            987655 7899999999999998764                    6999999999999999999999999999999998


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRM  219 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~  219 (228)
                      ..+......  ......||..|+|||.+.+..++.++|+||+|+++|+|++ |..||.+.+..+..........+
T Consensus       159 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~  230 (294)
T 4eqm_A          159 KALSETSLT--QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV-GEPPFNGETAVSIAIKHIQDSVP  230 (294)
T ss_dssp             TTC---------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHH-SSCSSCSSCHHHHHHHHHSSCCC
T ss_pred             ccccccccc--ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhhccCC
Confidence            755433211  1223467889999999998889999999999999999999 99999998877665554444333


No 61 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=8.2e-40  Score=272.43  Aligned_cols=206  Identities=25%  Similarity=0.401  Sum_probs=166.0

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      ..+..++|++.+.||+|+||.||+|..         ..++..||+|.+....  .......+.+|+.+|+.+ +||||++
T Consensus        10 ~~v~~~~y~i~~~LG~G~fG~V~~~~~---------~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~   79 (384)
T 4fr4_A           10 EDVNFDHFEILRAIGKGSFGKVCIVQK---------NDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVN   79 (384)
T ss_dssp             CCCCGGGEEEEEEEECCTTCCEEEEEE---------TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCC
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEE---------CCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCc
Confidence            457778999999999999999999984         3455679999986431  112245678999999999 9999999


Q ss_pred             eeeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          83 FIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        83 ~~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      +++++.... +++||||+.+|+|.+++..                    .|||++||+||||||+|||++.++.+||+||
T Consensus        80 l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DF  159 (384)
T 4fr4_A           80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDF  159 (384)
T ss_dssp             EEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             EEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEecc
Confidence            999987654 8899999999999988764                    6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeeccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCC---CHHHHHHHHHc
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIVTLGANPYPHI---PLCRIVHYLST  215 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~---~~~~~~~Diwslg~~~~~l~t~g~~pf~~~---~~~~~~~~~~~  215 (228)
                      |++..+....    ......||..|+|||++..   ..++.++|+|||||++|+|++ |..||...   ...++...+..
T Consensus       160 G~a~~~~~~~----~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~  234 (384)
T 4fr4_A          160 NIAAMLPRET----QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR-GRRPYHIRSSTSSKEIVHTFET  234 (384)
T ss_dssp             TTCEECCTTC----CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHH-SSCSSCCCTTSCHHHHHHHHHH
T ss_pred             ceeeeccCCC----ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHh-CCCCCCCCCCccHHHHHHHHhh
Confidence            9997553321    2234678899999999874   358899999999999999999 99999753   33444555554


Q ss_pred             CCCCCCCCCCC
Q psy3166         216 GYRMERPASCN  226 (228)
Q Consensus       216 ~~~~~~p~~~~  226 (228)
                      . .++.|..++
T Consensus       235 ~-~~~~p~~~s  244 (384)
T 4fr4_A          235 T-VVTYPSAWS  244 (384)
T ss_dssp             C-CCCCCTTSC
T ss_pred             c-ccCCCCcCC
Confidence            4 555666554


No 62 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.3e-40  Score=277.18  Aligned_cols=197  Identities=21%  Similarity=0.304  Sum_probs=163.5

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||+||+|+.         +.+++.||+|.+++...  ......+.+|..++..+ +||||+++
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~~---------~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l  126 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVKM---------KQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQL  126 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEEE---------TTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCE
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEEE---------CCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeE
Confidence            46678999999999999999999984         34556799999864311  11223467899999999 99999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++.... +++||||+++|+|.+++..                     .|||+++|+||||||+|||++.++.+||+||
T Consensus       127 ~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DF  206 (412)
T 2vd5_A          127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADF  206 (412)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             EEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeec
Confidence            99987755 8899999999999998864                     5999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccc-------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLV-------SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS  214 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-------~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~  214 (228)
                      |+++.+......  ......||+.|+|||++.       ...++.++|+|||||++|+|++ |..||.+.+..++..++.
T Consensus       207 Gla~~~~~~~~~--~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyellt-G~~Pf~~~~~~~~~~~i~  283 (412)
T 2vd5_A          207 GSCLKLRADGTV--RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY-GQTPFYADSTAETYGKIV  283 (412)
T ss_dssp             TTCEECCTTSCE--ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHH
T ss_pred             hhheeccCCCcc--ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHh-CCCCCCCCCHHHHHHHHH
Confidence            999765433211  122357899999999987       3458899999999999999999 999999998888877766


Q ss_pred             c
Q psy3166         215 T  215 (228)
Q Consensus       215 ~  215 (228)
                      .
T Consensus       284 ~  284 (412)
T 2vd5_A          284 H  284 (412)
T ss_dssp             T
T ss_pred             h
Confidence            5


No 63 
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=4.2e-40  Score=285.26  Aligned_cols=209  Identities=36%  Similarity=0.616  Sum_probs=180.2

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|.+.++          ..||+|.++....  ..+.+.+|+++|+++ +||||+++
T Consensus       261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~----------~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~~  327 (535)
T 2h8h_A          261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGT----------TRVAIKTLKPGTM--SPEAFLQEAQVMKKL-RHEKLVQL  327 (535)
T ss_dssp             CSBCCGGGEEEEEEEEECSSEEEEEEEETTT----------EEEEEEEECTTSS--CHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred             ceecchhhhhhheecccCCCeEEEEEEECCC----------ceEEEEEeCCCCC--CHHHHHHHHHHHHhC-CCCCEeeE
Confidence            4778999999999999999999999986432          3499999976532  235788999999999 99999999


Q ss_pred             eeEEEcCceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKDELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++.....++||||+.+|+|.+++..                      .|||+++|+||||||+|||++.++.+||+||
T Consensus       328 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DF  407 (535)
T 2h8h_A          328 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF  407 (535)
T ss_dssp             EEEECSSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCT
T ss_pred             EEEEeeccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEccc
Confidence            999888789999999999999998853                      5999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |++..+......  ......++..|+|||++....++.++||||||+++|+|++.|..||.+....++.+.+..+.+++.
T Consensus       408 G~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~  485 (535)
T 2h8h_A          408 GLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC  485 (535)
T ss_dssp             TSTTTCCCHHHH--TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCC
T ss_pred             ccceecCCCcee--cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            999765432111  122345567899999999888999999999999999999878999999999999999999999999


Q ss_pred             CCCCCC
Q psy3166         222 PASCNE  227 (228)
Q Consensus       222 p~~~~~  227 (228)
                      |..||+
T Consensus       486 ~~~~~~  491 (535)
T 2h8h_A          486 PPECPE  491 (535)
T ss_dssp             CTTCCH
T ss_pred             CCCCCH
Confidence            998875


No 64 
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=2.4e-39  Score=263.43  Aligned_cols=219  Identities=36%  Similarity=0.685  Sum_probs=182.8

Q ss_pred             ccCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         3 ~~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      -+|.+..++|++.+.||+|+||.||+|.+....    ...++..||+|.+...........+.+|+.+++++ +||||++
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~   92 (322)
T 1p4o_A           18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVV----KDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVR   92 (322)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEE----TTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCC
T ss_pred             hhhcchhhheeeeeEeccCCceEEEeeeecCcc----CCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEee
Confidence            357788899999999999999999999854311    22456679999998666666667789999999999 9999999


Q ss_pred             eeeEEEcC-ceEEEEecCCCCcHHHHHHH------------------------------hcccCCCCcccCCCCCCEeec
Q psy3166          83 FIGCCYKD-ELRLVVEYCALGDLQSYLRE------------------------------EYLSNNKVVHRDLATRNILLS  131 (228)
Q Consensus        83 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~------------------------------~~lh~~~i~H~~lk~~nil~~  131 (228)
                      +++++..+ ..+++||++++++|.+++..                              .|||++||+||||||+||+++
T Consensus        93 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~  172 (322)
T 1p4o_A           93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA  172 (322)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC
T ss_pred             eEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEc
Confidence            99998764 48899999999999988752                              589999999999999999999


Q ss_pred             CCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy3166         132 SPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVH  211 (228)
Q Consensus       132 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~  211 (228)
                      .++.+||+|||++.......... ......++..|+|||++.+..++.++|+||+|+++|+|++.|..||.+.+..++..
T Consensus       173 ~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  251 (322)
T 1p4o_A          173 EDFTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR  251 (322)
T ss_dssp             TTCCEEECCTTCCCGGGGGGCEE-GGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHH
T ss_pred             CCCeEEECcCccccccccccccc-cccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHH
Confidence            99999999999987654432221 11233456789999999888899999999999999999986889999999888888


Q ss_pred             HHHcCCCCCCCCCCCC
Q psy3166         212 YLSTGYRMERPASCNE  227 (228)
Q Consensus       212 ~~~~~~~~~~p~~~~~  227 (228)
                      .+..+..++.|..+|+
T Consensus       252 ~~~~~~~~~~~~~~~~  267 (322)
T 1p4o_A          252 FVMEGGLLDKPDNCPD  267 (322)
T ss_dssp             HHHTTCCCCCCTTCCH
T ss_pred             HHHcCCcCCCCCCCCH
Confidence            8888878888887774


No 65 
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.1e-39  Score=262.02  Aligned_cols=215  Identities=38%  Similarity=0.670  Sum_probs=177.6

Q ss_pred             CCCCCCceeeee-eeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC-HHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           5 CGYPPERLILGE-VLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD-AKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         5 ~~~~~~~~~~~~-~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      +.++.++|++.+ .||+|+||.||+|.+.       +..++..||+|.++.... ....+.+.+|+++++++ +||||++
T Consensus        11 ~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~-------~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~   82 (291)
T 1xbb_A           11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQ-------MKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVR   82 (291)
T ss_dssp             CBCCGGGEEEEEEEEEECSSEEEEEEEEE-------CSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCC
T ss_pred             eeecchhhhhccCccccccCeeeEeeeec-------CCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEE
Confidence            357788999998 9999999999999642       234556799999875532 23356788999999999 9999999


Q ss_pred             eeeEEEcCceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          83 FIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      +++++..+..+++||++++++|.+++..                    .|||+++|+|+||||+||+++.++.++|+|||
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg  162 (291)
T 1xbb_A           83 MIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG  162 (291)
T ss_dssp             EEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             EEEEECCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCC
Confidence            9999977789999999999999998764                    69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      ++.................++..|+|||.+.+..++.++|+||||+++|+|++.|..||.+.+..++...+..+.+++.|
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T 1xbb_A          163 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP  242 (291)
T ss_dssp             TCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC
T ss_pred             cceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            98765443322222223445678999999988888999999999999999997799999999999999999999888888


Q ss_pred             CCCCC
Q psy3166         223 ASCNE  227 (228)
Q Consensus       223 ~~~~~  227 (228)
                      ..+|+
T Consensus       243 ~~~~~  247 (291)
T 1xbb_A          243 AGCPR  247 (291)
T ss_dssp             TTCCH
T ss_pred             CCCCH
Confidence            88875


No 66 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=3.5e-39  Score=266.84  Aligned_cols=193  Identities=24%  Similarity=0.400  Sum_probs=164.4

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH-----HHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-----KTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .++|++.+.||+|+||+||+|+.         ..++..||+|.++.....     ...+.+.+|+.+|+++ +||||+++
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~---------~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l   80 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCRE---------KSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITL   80 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEE---------TTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEE---------CCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcE
Confidence            46799999999999999999984         345567999998754321     1246788999999999 89999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCC----cEEE
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPH----VVKI  138 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~----~~kl  138 (228)
                      ++++.... +++||||+++++|.+++..                    .|||++||+||||||+||+++.++    .+||
T Consensus        81 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl  160 (361)
T 2yab_A           81 HDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL  160 (361)
T ss_dssp             EEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred             EEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEE
Confidence            99987754 8899999999999998754                    699999999999999999998776    7999


Q ss_pred             eeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         139 SDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      +|||++..+....    ......||+.|+|||++.+..++.++|+||+||++|+|++ |..||.+.+..++...+..+
T Consensus       161 ~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~  233 (361)
T 2yab_A          161 IDFGLAHEIEDGV----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANITAV  233 (361)
T ss_dssp             CCCSSCEECCTTC----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SCCSSCCSSHHHHHHHHHTT
T ss_pred             EecCCceEcCCCC----ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhc
Confidence            9999997654322    1234568899999999998889999999999999999999 99999999888888888776


No 67 
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=6.7e-40  Score=290.55  Aligned_cols=208  Identities=24%  Similarity=0.354  Sum_probs=172.8

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||+||+|+.         ..+++.||+|.+++..  ..........|..++..+.+||||+.+
T Consensus       337 ~~~~~~f~~~~~LG~G~fG~V~~~~~---------~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l  407 (674)
T 3pfq_A          337 RMKLTDFNFLMVLGKGSFGKVMLSER---------KGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL  407 (674)
T ss_dssp             ---CTTEEEEEESSBTTTBCEEEEEE---------SSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCE
T ss_pred             cccccceEEEEEEccCCCEEEEEEEE---------CCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence            35678999999999999999999984         3455679999987431  112235677899999998789999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++... .+++||||+++|+|.+++..                    .|||+++|+||||||+|||++.++.+||+|||
T Consensus       408 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFG  487 (674)
T 3pfq_A          408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG  487 (674)
T ss_dssp             EEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCT
T ss_pred             EEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecc
Confidence            9988764 48899999999999998865                    69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      +++......   .......||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..++.+.+.++ .+..|
T Consensus       488 la~~~~~~~---~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyellt-G~~Pf~~~~~~~~~~~i~~~-~~~~p  562 (674)
T 3pfq_A          488 MCKENIWDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSIMEH-NVAYP  562 (674)
T ss_dssp             TCEECCCTT---CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHSS-CCCCC
T ss_pred             eeeccccCC---cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHc-CCCCCCCCCHHHHHHHHHhC-CCCCC
Confidence            987533221   12334678999999999998899999999999999999999 99999999999999998887 56777


Q ss_pred             CCCCC
Q psy3166         223 ASCNE  227 (228)
Q Consensus       223 ~~~~~  227 (228)
                      ..+++
T Consensus       563 ~~~s~  567 (674)
T 3pfq_A          563 KSMSK  567 (674)
T ss_dssp             TTSCH
T ss_pred             ccCCH
Confidence            76654


No 68 
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.9e-39  Score=265.05  Aligned_cols=214  Identities=37%  Similarity=0.703  Sum_probs=173.4

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      +..++|++.+.||+|+||.||+|.+..+..     ....+||+|.+...........+.+|+.+++++ +||||++++++
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-----~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~   85 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGI   85 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTC-----SCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEE
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCc-----eEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEE
Confidence            567899999999999999999998654432     223356888876554444557788999999999 99999999999


Q ss_pred             EEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166          87 CYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus        87 ~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      +..+..+++++++.+++|.+++..                     .|||+++|+||||||+||+++.++.+||+|||++.
T Consensus        86 ~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~  165 (327)
T 3lzb_A           86 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             EESSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred             EecCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence            998889999999999999998764                     69999999999999999999999999999999997


Q ss_pred             cccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q psy3166         146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASC  225 (228)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~  225 (228)
                      .+...... .......++..|+|||.+.+..++.++|+|||||++|+|++.|..||.+.+..++...+..+.+++.|..+
T Consensus       166 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  244 (327)
T 3lzb_A          166 LLGAEEKE-YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC  244 (327)
T ss_dssp             ---------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTB
T ss_pred             EccCcccc-ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccC
Confidence            65433211 11223445678999999999899999999999999999998799999999999999999999888888877


Q ss_pred             CC
Q psy3166         226 NE  227 (228)
Q Consensus       226 ~~  227 (228)
                      |+
T Consensus       245 ~~  246 (327)
T 3lzb_A          245 TI  246 (327)
T ss_dssp             CH
T ss_pred             CH
Confidence            64


No 69 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=7.8e-40  Score=277.89  Aligned_cols=207  Identities=24%  Similarity=0.362  Sum_probs=162.0

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC--CCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||.||+|+.         ..++..||+|.++..  ........+.+|+.+++++ +||||+++
T Consensus       144 ~~~~~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l  213 (446)
T 4ejn_A          144 RVTMNEFEYLKLLGKGTFGKVILVKE---------KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTAL  213 (446)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEE---------TTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCE
T ss_pred             CCChHHcEEeEEEeeCcCEEEEEEEE---------cCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeE
Confidence            35567899999999999999999984         445567999998743  1223345677899999999 89999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccC-CCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSN-NKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~-~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++.... +++||||+++++|.+++..                    .|||+ +||+||||||+|||++.++.+||+||
T Consensus       214 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DF  293 (446)
T 4ejn_A          214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF  293 (446)
T ss_dssp             EEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCC
T ss_pred             EEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccC
Confidence            99987654 8899999999999988754                    69998 99999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |+++......   .......||..|+|||++.+..++.++|+|||||++|+|++ |..||.+.+..++...+... .+..
T Consensus       294 G~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~-~~~~  368 (446)
T 4ejn_A          294 GLCKEGIKDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELILME-EIRF  368 (446)
T ss_dssp             CCCCTTCC--------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC-CCCC
T ss_pred             CCceeccCCC---cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhh-CCCCCCCCCHHHHHHHHHhC-CCCC
Confidence            9987533221   11234678899999999998899999999999999999999 99999998888887777665 4556


Q ss_pred             CCCCCC
Q psy3166         222 PASCNE  227 (228)
Q Consensus       222 p~~~~~  227 (228)
                      |..+++
T Consensus       369 p~~~~~  374 (446)
T 4ejn_A          369 PRTLGP  374 (446)
T ss_dssp             CTTSCH
T ss_pred             CccCCH
Confidence            666553


No 70 
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=2.8e-39  Score=258.06  Aligned_cols=211  Identities=38%  Similarity=0.643  Sum_probs=178.9

Q ss_pred             CccCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceE
Q psy3166           2 ALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIV   81 (228)
Q Consensus         2 ~~~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~   81 (228)
                      .-+|.++.++|++.+.||+|+||.||+|...+          +..||+|.++....  ..+.+.+|+++++++ +||||+
T Consensus         5 ~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~h~~i~   71 (279)
T 1qpc_A            5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNG----------HTKVAVKSLKQGSM--SPDAFLAEANLMKQL-QHQRLV   71 (279)
T ss_dssp             TCTTBCCGGGEEEEEEEEEETTEEEEEEEETT----------TEEEEEEEECTTSS--CHHHHHHHHHHHHHC-CCTTBC
T ss_pred             hhhcccCHHhhhheeeecCCCCeEEEEEEEcC----------CcEEEEEEecCCcc--cHHHHHHHHHHHHhC-CCcCcc
Confidence            34688999999999999999999999998533          23599999875532  235788999999999 999999


Q ss_pred             EeeeEEEcCceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEe
Q psy3166          82 SFIGCCYKDELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKIS  139 (228)
Q Consensus        82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~  139 (228)
                      ++++++..+..+++||++++++|.+++..                      .|||++||+|+||||+||+++.++.++|+
T Consensus        72 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~  151 (279)
T 1qpc_A           72 RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA  151 (279)
T ss_dssp             CEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEEC
T ss_pred             eEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEEC
Confidence            99999888889999999999999998642                      69999999999999999999999999999


Q ss_pred             eccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Q psy3166         140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRM  219 (228)
Q Consensus       140 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~  219 (228)
                      |||++.........  ......++..|+|||.+.+..++.++|+||||+++|+|++.|..||.+.+..++.+.+..+.++
T Consensus       152 Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~  229 (279)
T 1qpc_A          152 DFGLARLIEDNEYT--AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM  229 (279)
T ss_dssp             CCTTCEECSSSCEE--CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC
T ss_pred             CCcccccccCcccc--cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC
Confidence            99998765433211  1223445667999999988888999999999999999998689999999999999999999888


Q ss_pred             CCCCCCCC
Q psy3166         220 ERPASCNE  227 (228)
Q Consensus       220 ~~p~~~~~  227 (228)
                      ..|..+|+
T Consensus       230 ~~~~~~~~  237 (279)
T 1qpc_A          230 VRPDNCPE  237 (279)
T ss_dssp             CCCTTCCH
T ss_pred             CCcccccH
Confidence            88888774


No 71 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=2.8e-39  Score=258.49  Aligned_cols=209  Identities=38%  Similarity=0.701  Sum_probs=174.1

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      +|.++.++|++.+.||+|+||.||++.+.+          +..||+|.++.....  ...+.+|+.+++++ +||||+++
T Consensus        18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~h~~i~~~   84 (283)
T 3gen_A           18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRG----------QYDVAIKMIKEGSMS--EDEFIEEAKVMMNL-SHEKLVQL   84 (283)
T ss_dssp             TTBCCGGGEEEEEECC---CEEEEEEEETT----------TEEEEEEEECTTSBC--HHHHHHHHHHHHTC-CCTTBCCE
T ss_pred             CccCCHHHHHhHhhcCCCCCceEEEEEEcC----------CCeEEEEEecCCCCC--HHHHHHHHHHHhcC-CCCCEeeE
Confidence            578999999999999999999999997543          235999999755322  25678999999999 89999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++.... .+++||++++++|.+++..                     .|||+++|+|+||||+||+++.++.++|+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Df  164 (283)
T 3gen_A           85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF  164 (283)
T ss_dssp             EEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECST
T ss_pred             EEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccc
Confidence            99987644 8899999999999998754                     5999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |++.........  ......++..|+|||.+.+..++.++|+||+|+++|+|+|.|..||...+..+....+..+.+...
T Consensus       165 g~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~  242 (283)
T 3gen_A          165 GLSRYVLDDEYT--SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR  242 (283)
T ss_dssp             TGGGGBCCHHHH--STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC
T ss_pred             cccccccccccc--cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC
Confidence            998755433211  122345567899999999888999999999999999999769999999999999999999988888


Q ss_pred             CCCCCC
Q psy3166         222 PASCNE  227 (228)
Q Consensus       222 p~~~~~  227 (228)
                      |..+|+
T Consensus       243 ~~~~~~  248 (283)
T 3gen_A          243 PHLASE  248 (283)
T ss_dssp             CTTCCH
T ss_pred             CCcCCH
Confidence            877664


No 72 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=9.5e-39  Score=270.77  Aligned_cols=194  Identities=25%  Similarity=0.355  Sum_probs=163.5

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC-HHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD-AKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||+||+|.         +..++..||+|.+..... ....+.+.+|+.+++++ +||||+++++++.
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~---------~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~   80 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCV---------KVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSIS   80 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEE---------ETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEE
T ss_pred             CCeEEEEEeccCCCeEEEEEE---------ECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEE
Confidence            689999999999999999998         445566899999876533 33456788999999999 9999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeec---CCCcEEEeeccCc
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLS---SPHVVKISDFGLS  144 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~---~~~~~kl~dfg~~  144 (228)
                      .+. .++||||+.+|+|.+++..                    .|||++||+||||||+|||++   .++.+||+|||++
T Consensus        81 ~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a  160 (444)
T 3soa_A           81 EEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA  160 (444)
T ss_dssp             CSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred             ECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence            754 7899999999999988754                    699999999999999999998   4578999999999


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY  217 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~  217 (228)
                      ........   ......||+.|+|||++.+..++.++|+||+||++|+|++ |..||.+.+..++.+.+..+.
T Consensus       161 ~~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~-G~~Pf~~~~~~~~~~~i~~~~  229 (444)
T 3soa_A          161 IEVEGEQQ---AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV-GYPPFWDEDQHRLYQQIKAGA  229 (444)
T ss_dssp             BCCCTTCC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHTC
T ss_pred             EEecCCCc---eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHh-CCCCCCCccHHHHHHHHHhCC
Confidence            75543221   1224578899999999998889999999999999999999 999999999888888888763


No 73 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=9.2e-39  Score=264.53  Aligned_cols=192  Identities=26%  Similarity=0.459  Sum_probs=163.3

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||.||+|..         ..++..||+|.++... .....+.+.+|+.+++++ +||||+++++++.
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~   98 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVH---------KTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQ   98 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEE---------TTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEE---------CCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEE
Confidence            4799999999999999999984         3455679999987543 344556788999999999 9999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCC---CcEEEeeccCc
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGLS  144 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~---~~~kl~dfg~~  144 (228)
                      ... .++||||+++++|.+++..                    .|||+++|+||||||+||+++.+   +.+||+|||++
T Consensus        99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a  178 (362)
T 2bdw_A           99 EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA  178 (362)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             eCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence            755 7899999999999887753                    69999999999999999999864   46999999998


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      ........    .....||+.|+|||++.+..++.++|+|||||++|+|++ |..||.+.+..++...+..+
T Consensus       179 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~Pf~~~~~~~~~~~i~~~  245 (362)
T 2bdw_A          179 IEVNDSEA----WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV-GYPPFWDEDQHRLYAQIKAG  245 (362)
T ss_dssp             BCCTTCCS----CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHT
T ss_pred             eEecCCcc----cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhC
Confidence            75543221    223567889999999998889999999999999999999 99999999888888888776


No 74 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.1e-39  Score=266.10  Aligned_cols=220  Identities=42%  Similarity=0.809  Sum_probs=176.0

Q ss_pred             ccCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         3 ~~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      ..|.++.++|++.+.||+|+||.||+|......    ...++..||+|.++..........+.+|+.+++++.+||||++
T Consensus        38 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~  113 (344)
T 1rjb_A           38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGIS----KTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVN  113 (344)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCS----SSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCcccCHHHceeeeeecCCCCceeEEeeeeccc----cCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeee
Confidence            357889999999999999999999999864432    2345667999999765444455678899999999988999999


Q ss_pred             eeeEEEcC-ceEEEEecCCCCcHHHHHHH-------------------------------------------hcccCCCC
Q psy3166          83 FIGCCYKD-ELRLVVEYCALGDLQSYLRE-------------------------------------------EYLSNNKV  118 (228)
Q Consensus        83 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~-------------------------------------------~~lh~~~i  118 (228)
                      +++++... ..++||||+++++|.+++..                                           .|||++||
T Consensus       114 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  193 (344)
T 1rjb_A          114 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC  193 (344)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99998764 48899999999999988741                                           58999999


Q ss_pred             cccCCCCCCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCC
Q psy3166         119 VHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGA  198 (228)
Q Consensus       119 ~H~~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~  198 (228)
                      +|+||||+||+++.++.+||+|||++..+....... ......++..|+|||.+.+..++.++|+||||+++|+|+|.|.
T Consensus       194 vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~  272 (344)
T 1rjb_A          194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV-VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV  272 (344)
T ss_dssp             EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSE-EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             ccCCCChhhEEEcCCCcEEeCCCccCcccccCccce-eccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCC
Confidence            999999999999999999999999987554332111 1122345677999999988889999999999999999997699


Q ss_pred             CCCCCCCHHHH-HHHHHcCCCCCCCCCCCC
Q psy3166         199 NPYPHIPLCRI-VHYLSTGYRMERPASCNE  227 (228)
Q Consensus       199 ~pf~~~~~~~~-~~~~~~~~~~~~p~~~~~  227 (228)
                      .||.+.+..+. ...+..+.+++.|..+|+
T Consensus       273 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (344)
T 1rjb_A          273 NPYPGIPVDANFYKLIQNGFKMDQPFYATE  302 (344)
T ss_dssp             CSSTTCCCSHHHHHHHHTTCCCCCCTTCCH
T ss_pred             CCcccCCcHHHHHHHHhcCCCCCCCCCCCH
Confidence            99988765544 555777778888877764


No 75 
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=6.9e-39  Score=283.29  Aligned_cols=214  Identities=36%  Similarity=0.696  Sum_probs=180.4

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      +.+..++|++.+.||+|+||.||+|.+....      ..+..||+|.++........+.+.+|+.+++++ +||||++++
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~  457 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPE------NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLI  457 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSS------SCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCC------CccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence            4567789999999999999999999875432      234569999987665666667899999999999 999999999


Q ss_pred             eEEEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          85 GCCYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      +++..+..++||||+++|+|.+++..                     .|||+++|+||||||+|||++.++.+||+|||+
T Consensus       458 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~  537 (656)
T 2j0j_A          458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL  537 (656)
T ss_dssp             EEECSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred             EEEecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCC
Confidence            99877789999999999999998863                     699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPA  223 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~  223 (228)
                      +..........  .....++..|+|||++....++.++|+||||+++|+|++.|..||.+.+..++...+..+.+++.|.
T Consensus       538 a~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  615 (656)
T 2j0j_A          538 SRYMEDSTYYK--ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP  615 (656)
T ss_dssp             CCSCCC------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCT
T ss_pred             CeecCCCccee--ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCc
Confidence            97654332111  1223456789999999888899999999999999999966999999999999999999999999998


Q ss_pred             CCCC
Q psy3166         224 SCNE  227 (228)
Q Consensus       224 ~~~~  227 (228)
                      .||+
T Consensus       616 ~~~~  619 (656)
T 2j0j_A          616 NCPP  619 (656)
T ss_dssp             TCCH
T ss_pred             cccH
Confidence            8875


No 76 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=6.8e-39  Score=260.94  Aligned_cols=215  Identities=40%  Similarity=0.758  Sum_probs=163.2

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      ..++.++|++.+.||+|+||.||+|.+..+.      .....||+|.++... .......+.+|+.+++++ +||||+++
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~   90 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQED------GSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKL   90 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC-------------CEEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCC
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcccC------CcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehh
Confidence            3578899999999999999999999854432      122369999987542 234457788999999999 99999999


Q ss_pred             eeEEEcCc-------eEEEEecCCCCcHHHHHHH--------------------------hcccCCCCcccCCCCCCEee
Q psy3166          84 IGCCYKDE-------LRLVVEYCALGDLQSYLRE--------------------------EYLSNNKVVHRDLATRNILL  130 (228)
Q Consensus        84 ~~~~~~~~-------~~lv~e~~~~~~L~~~l~~--------------------------~~lh~~~i~H~~lk~~nil~  130 (228)
                      ++++....       .+++|||+.+++|.+++..                          .|||++||+||||||+||++
T Consensus        91 ~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli  170 (323)
T 3qup_A           91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML  170 (323)
T ss_dssp             CEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             hceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE
Confidence            99986543       3899999999999988742                          59999999999999999999


Q ss_pred             cCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy3166         131 SSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIV  210 (228)
Q Consensus       131 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~  210 (228)
                      +.++.+||+|||++......... .......++..|+|||.+.+..++.++|+|||||++|+|++.|..||.+.+..++.
T Consensus       171 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~  249 (323)
T 3qup_A          171 AEDMTVCVADFGLSRKIYSGDYY-RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY  249 (323)
T ss_dssp             CTTSCEEECCCCC------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH
T ss_pred             cCCCCEEEeeccccccccccccc-cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH
Confidence            99999999999998765433221 11223455678999999998889999999999999999998789999999999999


Q ss_pred             HHHHcCCCCCCCCCCCC
Q psy3166         211 HYLSTGYRMERPASCNE  227 (228)
Q Consensus       211 ~~~~~~~~~~~p~~~~~  227 (228)
                      ..+..+.+++.|..+|+
T Consensus       250 ~~~~~~~~~~~~~~~~~  266 (323)
T 3qup_A          250 NYLIGGNRLKQPPECME  266 (323)
T ss_dssp             HHHHTTCCCCCCTTCCH
T ss_pred             HHHhcCCCCCCCCccCH
Confidence            99998888888887764


No 77 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=3.4e-39  Score=278.73  Aligned_cols=208  Identities=23%  Similarity=0.298  Sum_probs=169.5

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      .++..++|++.+.||+|+||.||+|+.         ..+++.||+|.+++...  ......+.+|+.+|+++ +||||++
T Consensus       180 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~---------~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~  249 (543)
T 3c4z_A          180 QPMGEDWFLDFRVLGRGGFGEVFACQM---------KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVS  249 (543)
T ss_dssp             SCCCGGGEEEEEEEEECSSSEEEEEEE---------TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCC
T ss_pred             ccCChhheEEEEEEeeCCCeEEEEEEE---------CCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEee
Confidence            356778999999999999999999984         34556799999864321  12235678899999999 9999999


Q ss_pred             eeeEEEcCc-eEEEEecCCCCcHHHHHHH------------------------hcccCCCCcccCCCCCCEeecCCCcEE
Q psy3166          83 FIGCCYKDE-LRLVVEYCALGDLQSYLRE------------------------EYLSNNKVVHRDLATRNILLSSPHVVK  137 (228)
Q Consensus        83 ~~~~~~~~~-~~lv~e~~~~~~L~~~l~~------------------------~~lh~~~i~H~~lk~~nil~~~~~~~k  137 (228)
                      +++++.... +++||||+++|+|.+++..                        .|||++||+||||||+|||++.+|.+|
T Consensus       250 l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vk  329 (543)
T 3c4z_A          250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVR  329 (543)
T ss_dssp             EEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEE
T ss_pred             EEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEE
Confidence            999987654 8899999999999988753                        699999999999999999999999999


Q ss_pred             EeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----CHHHHHHHH
Q psy3166         138 ISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI----PLCRIVHYL  213 (228)
Q Consensus       138 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~----~~~~~~~~~  213 (228)
                      |+|||++..+.....   ......||+.|+|||++.+..++.++|+|||||++|+|++ |..||.+.    ...++.+.+
T Consensus       330 L~DFGla~~~~~~~~---~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyellt-G~~PF~~~~~~~~~~~~~~~i  405 (543)
T 3c4z_A          330 ISDLGLAVELKAGQT---KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA-ARGPFRARGEKVENKELKQRV  405 (543)
T ss_dssp             ECCCTTCEECCTTCC---CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCTTCCCCHHHHHHHH
T ss_pred             EeecceeeeccCCCc---ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHh-CCCCCCCCccchhHHHHHHHH
Confidence            999999976543321   1223578899999999999889999999999999999999 99999875    335566666


Q ss_pred             HcCCCCCCCCCCCC
Q psy3166         214 STGYRMERPASCNE  227 (228)
Q Consensus       214 ~~~~~~~~p~~~~~  227 (228)
                      ... .+..|..+|+
T Consensus       406 ~~~-~~~~p~~~s~  418 (543)
T 3c4z_A          406 LEQ-AVTYPDKFSP  418 (543)
T ss_dssp             HHC-CCCCCTTSCH
T ss_pred             hhc-ccCCCcccCH
Confidence            655 5566666653


No 78 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=2.1e-38  Score=256.85  Aligned_cols=202  Identities=31%  Similarity=0.551  Sum_probs=161.8

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      -|.+..++|++.+.||+|+||.||+|.+.+            .+|+|.++.. ......+.+.+|+.+++++ +||||++
T Consensus        30 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~------------~~avk~~k~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~   96 (307)
T 3lb7_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHG------------DVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILL   96 (307)
T ss_dssp             CCBCCTTSCCEEEEEEECSSCEEEEEESSS------------EEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCC
T ss_pred             eEEecccceEEEeEecCCCCeEEEEEEECC------------EEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCEEE
Confidence            467999999999999999999999997422            3788887654 2445567788999999999 9999999


Q ss_pred             eeeEEEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          83 FIGCCYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      +++++..+..++|||++.+++|.+++..                     .|||+++|+||||||+||+++.++.+||+||
T Consensus        97 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DF  176 (307)
T 3lb7_A           97 FMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDF  176 (307)
T ss_dssp             EEEEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCC
T ss_pred             EEEEEccCcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccC
Confidence            9999888889999999999999998853                     6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHcCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRI-VHYLSTGY  217 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~-~~~~~~~~  217 (228)
                      |++......... .......||..|+|||.+.   ...++.++|+||||+++|+|++ |..||.+....+. ...+..+.
T Consensus       177 g~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ellt-g~~Pf~~~~~~~~~~~~~~~~~  254 (307)
T 3lb7_A          177 GLATVKSRWSGS-QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT-GELPYSHINNRDQIIFMVGRGY  254 (307)
T ss_dssp             CSSCC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHH-SSCTTTTCCCHHHHHHHHHHTC
T ss_pred             CCceeccccccc-ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHh-CCCCCccCCcHHHHHHHHhcCC
Confidence            998754322111 1122356788899999986   5568889999999999999999 9999998666544 44455554


Q ss_pred             CCC
Q psy3166         218 RME  220 (228)
Q Consensus       218 ~~~  220 (228)
                      ..+
T Consensus       255 ~~~  257 (307)
T 3lb7_A          255 ASP  257 (307)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            443


No 79 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=7.6e-39  Score=254.10  Aligned_cols=208  Identities=36%  Similarity=0.654  Sum_probs=175.4

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      +.+..++|++.+.||+|+||.||+|.+.+          +..||+|.++.....  ...+.+|+++++++ +||||++++
T Consensus         3 ~~l~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~h~~i~~~~   69 (268)
T 3sxs_A            3 MELKREEITLLKELGSGQFGVVKLGKWKG----------QYDVAVKMIKEGSMS--EDEFFQEAQTMMKL-SHPKLVKFY   69 (268)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETT----------TEEEEEEEECBTTBC--HHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             eEechhheeeeeeeccCCCceEEEEEecC----------ceeEEEEEeccCCCc--HHHHHHHHHHHHhC-CCCCEeeEE
Confidence            56788999999999999999999997543          235999998765322  35678999999999 899999999


Q ss_pred             eEEEcC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          85 GCCYKD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        85 ~~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      +++..+ ..+++||++++++|.+++..                     .|||+++|+|+||||+||+++.++.++|+|||
T Consensus        70 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg  149 (268)
T 3sxs_A           70 GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFG  149 (268)
T ss_dssp             EEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTT
T ss_pred             EEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCc
Confidence            998765 48899999999999998764                     59999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      ++..........  .....++..|+|||.+.+..++.++|+||+|+++|+|++.|..||...+..+....+..+.++..|
T Consensus       150 ~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  227 (268)
T 3sxs_A          150 MTRYVLDDQYVS--SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP  227 (268)
T ss_dssp             CEEECCTTCEEE--CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC
T ss_pred             cceecchhhhhc--ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC
Confidence            987554432221  123445677999999988888999999999999999997799999999999999999998888888


Q ss_pred             CCCCC
Q psy3166         223 ASCNE  227 (228)
Q Consensus       223 ~~~~~  227 (228)
                      ..+|+
T Consensus       228 ~~~~~  232 (268)
T 3sxs_A          228 HLASD  232 (268)
T ss_dssp             TTSCH
T ss_pred             CcChH
Confidence            77664


No 80 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=1e-38  Score=258.51  Aligned_cols=219  Identities=38%  Similarity=0.751  Sum_probs=178.7

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|.+....    +..++..||+|.++........+.+.+|+.+++++.+||||+++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~   92 (313)
T 1t46_A           17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI----KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL   92 (313)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSS----STTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccChhhhhHHHhhCccCCcceEEEEEeecc----ccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeE
Confidence            46788999999999999999999999854321    34566789999998766666667889999999999889999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH--------------------------------------hcccCCCCcccCCC
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE--------------------------------------EYLSNNKVVHRDLA  124 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~--------------------------------------~~lh~~~i~H~~lk  124 (228)
                      ++++... ..+++||++++++|.+++..                                      .|||+++|+|+|||
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  172 (313)
T 1t46_A           93 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA  172 (313)
T ss_dssp             EEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence            9998764 48899999999999988742                                      58999999999999


Q ss_pred             CCCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3166         125 TRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI  204 (228)
Q Consensus       125 ~~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~  204 (228)
                      |+||+++.++.+||+|||++.......... ......++..|+|||.+.+..++.++|+||||+++|+|++.|..||.+.
T Consensus       173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  251 (313)
T 1t46_A          173 ARNILLTHGRITKICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM  251 (313)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCTTSCTTSE-ECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             cceEEEcCCCCEEEccccccccccccccce-eccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence            999999999999999999987554332211 1123445677999999988889999999999999999997799999887


Q ss_pred             CHHH-HHHHHHcCCCCCCCCCCCC
Q psy3166         205 PLCR-IVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       205 ~~~~-~~~~~~~~~~~~~p~~~~~  227 (228)
                      ...+ +...+..+.+...|..+|+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~  275 (313)
T 1t46_A          252 PVDSKFYKMIKEGFRMLSPEHAPA  275 (313)
T ss_dssp             CSSHHHHHHHHHTCCCCCCTTSCH
T ss_pred             cchhHHHHHhccCCCCCCcccCCH
Confidence            6544 4555666777777776664


No 81 
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=4.6e-39  Score=260.90  Aligned_cols=200  Identities=26%  Similarity=0.374  Sum_probs=157.7

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      +.-.++|++.+.||+|+||.||+|+.         ..++..||+|.++...  .......+.+|+.+++++ +||||+++
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~   77 (311)
T 3ork_A            8 SHLSDRYELGEILGFGGMSEVHLARD---------LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAV   77 (311)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCE
T ss_pred             ceecCcEEEEEEEccCCCEEEEEEEE---------CCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceE
Confidence            34457899999999999999999984         4456679999987542  344556788999999999 99999999


Q ss_pred             eeEEEcCc-----eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEE
Q psy3166          84 IGCCYKDE-----LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKI  138 (228)
Q Consensus        84 ~~~~~~~~-----~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl  138 (228)
                      ++++....     .++||||+++++|.+++..                    .|||+++|+|+||||+||+++.++.+||
T Consensus        78 ~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl  157 (311)
T 3ork_A           78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKV  157 (311)
T ss_dssp             EEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEE
T ss_pred             EEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEE
Confidence            99875432     4899999999999998764                    6999999999999999999999999999


Q ss_pred             eeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         139 SDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      +|||++..+..............|+..|+|||.+.+..++.++|+||||+++|+|++ |..||.+.+..+...+....
T Consensus       158 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~  234 (311)
T 3ork_A          158 MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSPVSVAYQHVRE  234 (311)
T ss_dssp             CCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHC
T ss_pred             eeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcC
Confidence            999998765443222222234567889999999998889999999999999999999 99999998887775554444


No 82 
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.5e-39  Score=268.90  Aligned_cols=210  Identities=40%  Similarity=0.764  Sum_probs=165.4

Q ss_pred             ceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc-
Q psy3166          11 RLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK-   89 (228)
Q Consensus        11 ~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~-   89 (228)
                      .|++.+.||+|+||+||+|.+...      ......||+|.++.........++.+|+.+++++ +||||+++++++.. 
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~  162 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDN------DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRS  162 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEET------TTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCC
T ss_pred             eeecCcEeeeCCCeEEEEEEEECC------CCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC
Confidence            467889999999999999986432      1234568999987655555667899999999999 99999999998754 


Q ss_pred             -CceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccc
Q psy3166          90 -DELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI  147 (228)
Q Consensus        90 -~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~  147 (228)
                       +..++||||+++++|.+++..                     .|||+++|+||||||+||+++.++.+||+|||+++.+
T Consensus       163 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~  242 (373)
T 3c1x_A          163 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM  242 (373)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             CCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccc
Confidence             357899999999999999863                     6999999999999999999999999999999998755


Q ss_pred             cccccc-cCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q psy3166         148 YEQNVF-QNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN  226 (228)
Q Consensus       148 ~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~  226 (228)
                      ...... ........++..|+|||.+....++.++|+||||+++|+|++.|..||...+..++...+..+.++..|..||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~  322 (373)
T 3c1x_A          243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP  322 (373)
T ss_dssp             ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCC
T ss_pred             cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence            332211 1112234556789999999988899999999999999999996788999888888888889998888888887


Q ss_pred             C
Q psy3166         227 E  227 (228)
Q Consensus       227 ~  227 (228)
                      +
T Consensus       323 ~  323 (373)
T 3c1x_A          323 D  323 (373)
T ss_dssp             H
T ss_pred             H
Confidence            5


No 83 
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=7.7e-39  Score=259.53  Aligned_cols=219  Identities=41%  Similarity=0.778  Sum_probs=179.2

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|.+.+..    +..++..||+|.++..........+.+|+.+++++.+||||+++
T Consensus        21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGID----KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEESSS----STTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ceecchhheeeeeEEcCCCceeEEEEEEecCC----ccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            46788899999999999999999999865432    34566789999998766666667889999999999789999999


Q ss_pred             eeEEEcC--ceEEEEecCCCCcHHHHHHH------------------------------------hcccCCCCcccCCCC
Q psy3166          84 IGCCYKD--ELRLVVEYCALGDLQSYLRE------------------------------------EYLSNNKVVHRDLAT  125 (228)
Q Consensus        84 ~~~~~~~--~~~lv~e~~~~~~L~~~l~~------------------------------------~~lh~~~i~H~~lk~  125 (228)
                      ++++...  ..+++|||+++++|.+++..                                    .|||+++|+|+||||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp  176 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA  176 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCcc
Confidence            9988653  38899999999999988742                                    589999999999999


Q ss_pred             CCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q psy3166         126 RNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP  205 (228)
Q Consensus       126 ~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~  205 (228)
                      +||+++.++.+||+|||++.......... ......++..|+|||++.+..++.++|+||||+++|+|+|.|..||.+..
T Consensus       177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~  255 (316)
T 2xir_A          177 RNILLSEKNVVKICDFGLARDIYKDPDYV-RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  255 (316)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTTCTTSE-EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ceEEECCCCCEEECCCccccccccCccce-eccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence            99999999999999999987553322111 11223456779999999988899999999999999999976999998866


Q ss_pred             HH-HHHHHHHcCCCCCCCCCCCC
Q psy3166         206 LC-RIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       206 ~~-~~~~~~~~~~~~~~p~~~~~  227 (228)
                      .. .+...+..+.+++.|..+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~  278 (316)
T 2xir_A          256 IDEEFCRRLKEGTRMRAPDYTTP  278 (316)
T ss_dssp             CSHHHHHHHHHTCCCCCCTTCCH
T ss_pred             hhHHHHHHhccCccCCCCCCCCH
Confidence            44 45667777878888877764


No 84 
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.9e-38  Score=255.44  Aligned_cols=213  Identities=40%  Similarity=0.767  Sum_probs=173.3

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      ...+|++.+.||+|+||.||+|.+...      ......+|+|.+.........+.+.+|+.+++++ +||||+++++++
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~------~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~   95 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDN------DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGIC   95 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----------CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEE
T ss_pred             cceehhhcceeeecCCceEEEEEEecC------CCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEE
Confidence            345788999999999999999986442      2234468999988766666677889999999999 999999999986


Q ss_pred             Ec--CceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          88 YK--DELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        88 ~~--~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      ..  +..+++||++.+++|.+++..                     .|||+++|+||||||+||+++.++.+||+|||++
T Consensus        96 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a  175 (298)
T 3f66_A           96 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA  175 (298)
T ss_dssp             CCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred             EcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccc
Confidence            54  347899999999999998853                     5999999999999999999999999999999998


Q ss_pred             ccccccccc-cCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q psy3166         145 EDIYEQNVF-QNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPA  223 (228)
Q Consensus       145 ~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~  223 (228)
                      ..+...... ........++..|+|||.+.+..++.++|+||+|+++|+|++.|..||......+....+..+.+...|.
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (298)
T 3f66_A          176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE  255 (298)
T ss_dssp             CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCT
T ss_pred             ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCc
Confidence            765443221 1223345567789999999988899999999999999999986678888888888888888888888888


Q ss_pred             CCCC
Q psy3166         224 SCNE  227 (228)
Q Consensus       224 ~~~~  227 (228)
                      .+|+
T Consensus       256 ~~~~  259 (298)
T 3f66_A          256 YCPD  259 (298)
T ss_dssp             TCCH
T ss_pred             cCCH
Confidence            7764


No 85 
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=1.2e-38  Score=260.60  Aligned_cols=219  Identities=39%  Similarity=0.778  Sum_probs=177.8

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|....+.    .......||+|.++..........+.+|+.+++++.+||||+++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~  115 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLG----KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL  115 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCS----SSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCC----cccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeE
Confidence            46788999999999999999999999876543    12334569999998766666667889999999999789999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH----------------------------------hcccCCCCcccCCCCCCE
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE----------------------------------EYLSNNKVVHRDLATRNI  128 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~----------------------------------~~lh~~~i~H~~lk~~ni  128 (228)
                      ++++..+ ..++|||++++|+|.+++..                                  .|||+++|+|+||||+||
T Consensus       116 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NI  195 (333)
T 2i1m_A          116 LGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV  195 (333)
T ss_dssp             EEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGC
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceE
Confidence            9998764 48899999999999988742                                  589999999999999999


Q ss_pred             eecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy3166         129 LLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCR  208 (228)
Q Consensus       129 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~  208 (228)
                      +++.++.+||+|||++.......... ......++..|+|||.+.+..++.++|+||||+++|+|+|.|..||.+.....
T Consensus       196 l~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  274 (333)
T 2i1m_A          196 LLTNGHVAKIGDFGLARDIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS  274 (333)
T ss_dssp             EEEGGGEEEBCCCGGGCCGGGCTTSE-ECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred             EECCCCeEEECcccccccccccccee-ecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence            99999999999999987554332111 11234456789999999888899999999999999999976899998866544


Q ss_pred             H-HHHHHcCCCCCCCCCCCC
Q psy3166         209 I-VHYLSTGYRMERPASCNE  227 (228)
Q Consensus       209 ~-~~~~~~~~~~~~p~~~~~  227 (228)
                      . ...+..+.+++.|..+|+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~  294 (333)
T 2i1m_A          275 KFYKLVKDGYQMAQPAFAPK  294 (333)
T ss_dssp             HHHHHHHHTCCCCCCTTCCH
T ss_pred             HHHHHHhcCCCCCCCCCCCH
Confidence            4 455666777777777664


No 86 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=2.7e-38  Score=250.83  Aligned_cols=206  Identities=22%  Similarity=0.390  Sum_probs=170.6

Q ss_pred             CCccCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCc
Q psy3166           1 MALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDH   79 (228)
Q Consensus         1 ~~~~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~n   79 (228)
                      |.-.++++.++|++.+.||+|+||.||+|++.           +..||+|.++... .......+.+|+.+++++ +|||
T Consensus         1 m~~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~-----------~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~   68 (271)
T 3kmu_A            1 MNKHSGIDFKQLNFLTKLNENHSGELWKGRWQ-----------GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPN   68 (271)
T ss_dssp             ---CCCCCGGGCEEEEEEEEETTEEEEEEEET-----------TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTT
T ss_pred             CCCcCCCCHHHhHHHHHhcCCCcceEEEEEEC-----------CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCc
Confidence            45678999999999999999999999999853           3459999987553 445567789999999999 9999


Q ss_pred             eEEeeeEEEcC---ceEEEEecCCCCcHHHHHHH----------------------hcccCCC--CcccCCCCCCEeecC
Q psy3166          80 IVSFIGCCYKD---ELRLVVEYCALGDLQSYLRE----------------------EYLSNNK--VVHRDLATRNILLSS  132 (228)
Q Consensus        80 i~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~--i~H~~lk~~nil~~~  132 (228)
                      |+++++++...   ..+++|||+++++|.+++..                      .|||+++  ++|+||||+||+++.
T Consensus        69 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~  148 (271)
T 3kmu_A           69 VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE  148 (271)
T ss_dssp             EECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECT
T ss_pred             hhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcC
Confidence            99999998764   47899999999999999864                      6999999  999999999999999


Q ss_pred             CCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCC---chhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy3166         133 PHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYT---NKSDVWSFGVVLWEIVTLGANPYPHIPLCRI  209 (228)
Q Consensus       133 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~---~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~  209 (228)
                      ++.+++.||++.....        .....+|..|+|||.+.+..++   .++|+||||+++|+|++ |..||.+.+..+.
T Consensus       149 ~~~~~l~~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~  219 (271)
T 3kmu_A          149 DMTARISMADVKFSFQ--------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT-REVPFADLSNMEI  219 (271)
T ss_dssp             TSCEEEEGGGSCCTTS--------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHH-CSCTTTTSCHHHH
T ss_pred             CcceeEEeccceeeec--------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHh-CCCCccccChHHH
Confidence            9999999988765321        1235667889999998865544   37999999999999999 9999999888877


Q ss_pred             HHH-HHcCCCCCCCCCCCC
Q psy3166         210 VHY-LSTGYRMERPASCNE  227 (228)
Q Consensus       210 ~~~-~~~~~~~~~p~~~~~  227 (228)
                      ... ...+.+++.|..+|+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~  238 (271)
T 3kmu_A          220 GMKVALEGLRPTIPPGISP  238 (271)
T ss_dssp             HHHHHHSCCCCCCCTTCCH
T ss_pred             HHHHHhcCCCCCCCCCCCH
Confidence            555 556777788888775


No 87 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-38  Score=259.84  Aligned_cols=193  Identities=21%  Similarity=0.373  Sum_probs=163.6

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .++|++.+.||+|+||.||+|..         ..++..||+|.++...  .....+.+|+.+++.+ +||||+++++++.
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~---------~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~   71 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVE---------TSSKKTYMAKFVKVKG--TDQVLVKKEISILNIA-RHRNILHLHESFE   71 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHS-CCTTBCCEEEEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEE---------CCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhC-CCCCCCeEeEEEe
Confidence            37899999999999999999984         4455679999987542  3345678999999999 9999999999987


Q ss_pred             cC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecC--CCcEEEeeccCc
Q psy3166          89 KD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSS--PHVVKISDFGLS  144 (228)
Q Consensus        89 ~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~--~~~~kl~dfg~~  144 (228)
                      .. ..+++|||+++++|.+++..                     .|||++||+||||||+||+++.  ++.+||+|||++
T Consensus        72 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a  151 (321)
T 1tki_A           72 SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQA  151 (321)
T ss_dssp             ETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTC
T ss_pred             cCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCC
Confidence            64 48899999999999998753                     6999999999999999999987  789999999999


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR  218 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~  218 (228)
                      ..+......    ....+++.|+|||++.+..++.++|+||+||++|+|++ |..||.+.+..++...+..+..
T Consensus       152 ~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~  220 (321)
T 1tki_A          152 RQLKPGDNF----RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQQIIENIMNAEY  220 (321)
T ss_dssp             EECCTTCEE----EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHTCC
T ss_pred             eECCCCCcc----ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHh-CCCCCcCCCHHHHHHHHHcCCC
Confidence            765433211    12456788999999988888999999999999999999 9999999988888888777643


No 88 
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1e-38  Score=260.47  Aligned_cols=216  Identities=37%  Similarity=0.699  Sum_probs=173.4

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      .++.++|++.+.||+|+||.||+|++.+..    +..++..||+|.+..........++.+|+.+++++ +||||+++++
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~  100 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMP----NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIG  100 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC------------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCC----CCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEE
Confidence            478899999999999999999999864432    33456679999997665666667889999999999 9999999999


Q ss_pred             EEEcC-ceEEEEecCCCCcHHHHHHH---------------------------hcccCCCCcccCCCCCCEeecC---CC
Q psy3166          86 CCYKD-ELRLVVEYCALGDLQSYLRE---------------------------EYLSNNKVVHRDLATRNILLSS---PH  134 (228)
Q Consensus        86 ~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------------~~lh~~~i~H~~lk~~nil~~~---~~  134 (228)
                      ++... ..+++||++++++|.+++..                           .|||+++|+|+||||+||+++.   +.
T Consensus       101 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~  180 (327)
T 2yfx_A          101 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR  180 (327)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTC
T ss_pred             EEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcc
Confidence            98764 47899999999999998863                           5899999999999999999984   44


Q ss_pred             cEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy3166         135 VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS  214 (228)
Q Consensus       135 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~  214 (228)
                      .++|+|||++.......... ......++..|+|||.+.+..++.++|+||||+++|+|+|.|..||......++...+.
T Consensus       181 ~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  259 (327)
T 2yfx_A          181 VAKIGDFGMARDIYRASYYR-KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT  259 (327)
T ss_dssp             CEEECCCHHHHHHHC-------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             eEEECccccccccccccccc-cCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh
Confidence            69999999986543322111 12234557789999999888899999999999999999977999999998888899999


Q ss_pred             cCCCCCCCCCCCC
Q psy3166         215 TGYRMERPASCNE  227 (228)
Q Consensus       215 ~~~~~~~p~~~~~  227 (228)
                      .+.+++.|..+|+
T Consensus       260 ~~~~~~~~~~~~~  272 (327)
T 2yfx_A          260 SGGRMDPPKNCPG  272 (327)
T ss_dssp             TTCCCCCCTTCCH
T ss_pred             cCCCCCCCCCCCH
Confidence            9888888887764


No 89 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=6.9e-39  Score=256.73  Aligned_cols=210  Identities=41%  Similarity=0.777  Sum_probs=178.5

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.+..++|++.+.||+|+||.||+|.+         ..++..||+|.+.....  ..+.+.+|+.+++++ +||||+++
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~---------~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l-~h~~i~~~   74 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVW---------KKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEI-KHPNLVQL   74 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEE---------GGGTEEEEEEEECSCST--HHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred             cccccccceeEEeecCCCCceeEEEeEe---------cCCCEEEEEEecCcCHH--HHHHHHHHHHHHHhC-CCCCEeeE
Confidence            4678899999999999999999999984         44566799999875533  346788999999999 89999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEee
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISD  140 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~d  140 (228)
                      ++++..+ ..++|||++.+++|.+++..                      .|||+++|+|+||||+||+++.++.++|+|
T Consensus        75 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~D  154 (288)
T 3kfa_A           75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD  154 (288)
T ss_dssp             EEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             EEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEcc
Confidence            9998764 48899999999999998864                      589999999999999999999999999999


Q ss_pred             ccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Q psy3166         141 FGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRME  220 (228)
Q Consensus       141 fg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~  220 (228)
                      ||++..........  .....++..|+|||.+.+..++.++|+||+|+++|+|++.|..||.+.+..++...+....+++
T Consensus       155 fg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~  232 (288)
T 3kfa_A          155 FGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME  232 (288)
T ss_dssp             CCGGGTSCSSSSEE--ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC
T ss_pred             CccceeccCCcccc--ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCC
Confidence            99987554332111  1223445679999999988899999999999999999987899999999888999999998888


Q ss_pred             CCCCCCC
Q psy3166         221 RPASCNE  227 (228)
Q Consensus       221 ~p~~~~~  227 (228)
                      .|..+|+
T Consensus       233 ~~~~~~~  239 (288)
T 3kfa_A          233 RPEGCPE  239 (288)
T ss_dssp             CCTTCCH
T ss_pred             CCCCCCH
Confidence            8888875


No 90 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=1.3e-39  Score=267.02  Aligned_cols=202  Identities=28%  Similarity=0.435  Sum_probs=159.1

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH--HHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA--KTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      ..++|++.+.||+|+||+||+|.+         ..++..||+|.+......  .....+.+|+.+++.+ +||||+++++
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~   76 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATH---------YKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYD   76 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEE---------TTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEE
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEE---------CCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEE
Confidence            346899999999999999999984         445567999998643111  1124678999999999 9999999999


Q ss_pred             EEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          86 CCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        86 ~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      ++.... .++||||+ +|+|.+++..                    .|||++||+||||||+||+++.++.+||+|||++
T Consensus        77 ~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s  155 (336)
T 3h4j_B           77 VITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS  155 (336)
T ss_dssp             EEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCT
T ss_pred             EEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccc
Confidence            987654 88999999 6788888754                    6999999999999999999999999999999998


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIY-TNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPA  223 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~  223 (228)
                      ........    .....||+.|+|||++.+..+ ++++|+||+||++|+|++ |..||.+....++...+..+ ....|.
T Consensus       156 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~  229 (336)
T 3h4j_B          156 NIMTDGNF----LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLV-GRLPFDDEFIPNLFKKVNSC-VYVMPD  229 (336)
T ss_dssp             BTTTTSBT----TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHH-SSCSSBCSSSTTCBCCCCSS-CCCCCT
T ss_pred             eeccCCcc----cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHh-CCCCCCCccHHHHHHHHHcC-CCCCcc
Confidence            75543321    234567889999999987765 689999999999999999 99999876554444333333 333444


Q ss_pred             CCC
Q psy3166         224 SCN  226 (228)
Q Consensus       224 ~~~  226 (228)
                      .++
T Consensus       230 ~~s  232 (336)
T 3h4j_B          230 FLS  232 (336)
T ss_dssp             TSC
T ss_pred             cCC
Confidence            443


No 91 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=7.4e-39  Score=259.41  Aligned_cols=187  Identities=33%  Similarity=0.557  Sum_probs=156.0

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      .+..++|++.+.||+|+||+||+|.+.         .++..||+|.+... .......+.+|+.+++++ +||||+++++
T Consensus         6 ~~~~~~~~~~~~lG~G~~g~V~~~~~~---------~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~~~~   74 (310)
T 3s95_A            6 IFRPSDLIHGEVLGKGCFGQAIKVTHR---------ETGEVMVMKELIRF-DEETQRTFLKEVKVMRCL-EHPNVLKFIG   74 (310)
T ss_dssp             EECGGGEEEEEEEECCSSEEEEEEEET---------TTCCEEEEEEESCC-CHHHHHHHHHHHHHHTTC-CCTTBCCEEE
T ss_pred             eeChhHeeccceecCCCCEEEEEEEEC---------CCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhC-CCcCcccEEE
Confidence            467899999999999999999999853         34557999987543 455567889999999999 8999999999


Q ss_pred             EEEcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          86 CCYKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        86 ~~~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      ++..+. .++||||+.+++|.+++..                     .|||+++|+|+||||+||+++.++.+||+|||+
T Consensus        75 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~  154 (310)
T 3s95_A           75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGL  154 (310)
T ss_dssp             EEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTT
T ss_pred             EEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeeccc
Confidence            987654 8899999999999998864                     699999999999999999999999999999999


Q ss_pred             cccccccccccC-----------CCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3166         144 SEDIYEQNVFQN-----------GEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI  204 (228)
Q Consensus       144 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~  204 (228)
                      +..+........           ......||..|+|||++.+..++.++|+||||+++|+|++ |..||...
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~  225 (310)
T 3s95_A          155 ARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG-RVNADPDY  225 (310)
T ss_dssp             CEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-TCCSSTTT
T ss_pred             ceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhc-CCCCCcch
Confidence            875533221110           1114568889999999999889999999999999999999 99988764


No 92 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.4e-38  Score=250.89  Aligned_cols=209  Identities=33%  Similarity=0.646  Sum_probs=175.7

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.++.++|++.+.||+|+||.||+|.+.+          +..||+|.++.....  .+.+.+|+.+++++ +||||+++
T Consensus         2 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l-~h~~i~~~   68 (267)
T 3t9t_A            2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLN----------KDKVAIKTIREGAMS--EEDFIEEAEVMMKL-SHPKLVQL   68 (267)
T ss_dssp             -CBCCGGGEEEEEEEEEETTEEEEEEEETT----------TEEEEEEEECTTTBC--HHHHHHHHHHHHTC-CCTTBCCE
T ss_pred             ceEEchhheeeeeEecCCCceeEEEEEecC----------CCeEEEEEccccCCC--HHHHHHHHHHHHhC-CCCCEeeE
Confidence            477899999999999999999999998532          235999998765322  25688999999999 99999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++..+ ..+++||++++++|.+++..                     .|||+++++|+||||+||+++.++.++|+||
T Consensus        69 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~df  148 (267)
T 3t9t_A           69 YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDF  148 (267)
T ss_dssp             EEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCT
T ss_pred             EEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccc
Confidence            9998764 48899999999999998864                     5899999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |++.........  ......++..|+|||++....++.++|+||+|+++|+|++.|..||...+..++.+.+..+.++..
T Consensus       149 g~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~  226 (267)
T 3t9t_A          149 GMTRFVLDDQYT--SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK  226 (267)
T ss_dssp             TGGGGBCCHHHH--STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC
T ss_pred             cccccccccccc--ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCC
Confidence            998755332211  122345567899999998888999999999999999999868999999998999999999888887


Q ss_pred             CCCCCC
Q psy3166         222 PASCNE  227 (228)
Q Consensus       222 p~~~~~  227 (228)
                      |..+|+
T Consensus       227 ~~~~~~  232 (267)
T 3t9t_A          227 PRLAST  232 (267)
T ss_dssp             CTTSCH
T ss_pred             CccCcH
Confidence            877654


No 93 
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1.2e-38  Score=259.37  Aligned_cols=214  Identities=36%  Similarity=0.621  Sum_probs=172.3

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      +..+.|++.+.||+|+||.||++.+...     +..++..||+|.++..........+.+|+.+++++ +||||++++++
T Consensus        28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~  101 (318)
T 3lxp_A           28 FHKRYLKKIRDLGEGHFGKVSLYCYDPT-----NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGC  101 (318)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECSC-----C--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred             ecHHHHhhhheecCCCCeEEEEEEEccC-----CCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEE
Confidence            3444459999999999999999876432     44577789999998776666677899999999999 89999999999


Q ss_pred             EEcC---ceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          87 CYKD---ELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        87 ~~~~---~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      +...   .+++|||++++++|.+++..                   .|||+++|+|+||||+||+++.++.++|+|||++
T Consensus       102 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a  181 (318)
T 3lxp_A          102 CEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA  181 (318)
T ss_dssp             EEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred             EecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccc
Confidence            8763   37899999999999998754                   6999999999999999999999999999999999


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---------------HH
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC---------------RI  209 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~---------------~~  209 (228)
                      .................++..|+|||.+.+..++.++|+||||+++|+|++ |..||......               ++
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  260 (318)
T 3lxp_A          182 KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRL  260 (318)
T ss_dssp             EECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT-TTCGGGSHHHHHHHHHCSCCHHHHHHHH
T ss_pred             ccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHh-CCCcccccchhhhhhhcccccchhHHHH
Confidence            765443322222334556778999999988888999999999999999999 99999764322               34


Q ss_pred             HHHHHcCCCCCCCCCCCC
Q psy3166         210 VHYLSTGYRMERPASCNE  227 (228)
Q Consensus       210 ~~~~~~~~~~~~p~~~~~  227 (228)
                      ...+..+.+++.|..+|+
T Consensus       261 ~~~~~~~~~~~~~~~~~~  278 (318)
T 3lxp_A          261 TELLERGERLPRPDKCPA  278 (318)
T ss_dssp             HHHHHTTCCCCCCTTCCH
T ss_pred             HHHHhcccCCCCCccccH
Confidence            455677778888888774


No 94 
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=5.4e-38  Score=254.57  Aligned_cols=214  Identities=39%  Similarity=0.773  Sum_probs=170.0

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      .+..++|++.+.||+|+||.||+|....      +..++..||+|.++... .......+.+|+.+++++ +||||++++
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~------~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~  102 (313)
T 3brb_A           30 VIDRNLLILGKILGEGEFGSVMEGNLKQ------EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLL  102 (313)
T ss_dssp             BCCGGGEEEEEEEEC-CCCCEEEEEEEC------TTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCC
T ss_pred             ccCHHHeeeccceeecCCeEEEEEEEec------cCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeee
Confidence            4778899999999999999999998644      23456679999987553 445567788999999999 899999999


Q ss_pred             eEEEcC------ceEEEEecCCCCcHHHHHHH--------------------------hcccCCCCcccCCCCCCEeecC
Q psy3166          85 GCCYKD------ELRLVVEYCALGDLQSYLRE--------------------------EYLSNNKVVHRDLATRNILLSS  132 (228)
Q Consensus        85 ~~~~~~------~~~lv~e~~~~~~L~~~l~~--------------------------~~lh~~~i~H~~lk~~nil~~~  132 (228)
                      +++...      ..+++||++++++|.+++..                          .|||+++|+|+||||+||+++.
T Consensus       103 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~  182 (313)
T 3brb_A          103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRD  182 (313)
T ss_dssp             EEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECT
T ss_pred             EEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC
Confidence            988653      25899999999999998731                          6999999999999999999999


Q ss_pred             CCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy3166         133 PHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHY  212 (228)
Q Consensus       133 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~  212 (228)
                      ++.+||+|||++......... .......++..|+|||.+.+..++.++|+||||+++|+|++.|..||.+....++...
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  261 (313)
T 3brb_A          183 DMTVCVADFGLSKKIYSGDYY-RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY  261 (313)
T ss_dssp             TSCEEECSCSCC-----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred             CCcEEEeecCcceeccccccc-CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH
Confidence            999999999998755433211 1122345567899999999888999999999999999999878899999999999999


Q ss_pred             HHcCCCCCCCCCCCC
Q psy3166         213 LSTGYRMERPASCNE  227 (228)
Q Consensus       213 ~~~~~~~~~p~~~~~  227 (228)
                      +..+.+++.|..+|+
T Consensus       262 ~~~~~~~~~~~~~~~  276 (313)
T 3brb_A          262 LLHGHRLKQPEDCLD  276 (313)
T ss_dssp             HHTTCCCCCBTTCCH
T ss_pred             HHcCCCCCCCccccH
Confidence            999988888888774


No 95 
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=8.7e-39  Score=277.21  Aligned_cols=206  Identities=24%  Similarity=0.338  Sum_probs=166.6

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||.||+|+..         .++..||+|.+....  .......+.+|+.+|+++ +||||+++
T Consensus       180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~---------~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l  249 (576)
T 2acx_A          180 PVTKNTFRQYRVLGKGGFGEVCACQVR---------ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSL  249 (576)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred             CccccceEEEEEEeeCCCEEEEEEEEC---------CCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeE
Confidence            367789999999999999999999843         455679999986431  111235678899999999 99999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEee
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISD  140 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~d  140 (228)
                      ++++.... +++||||+++|+|.+++..                      .|||++||+||||||+|||++.++.+||+|
T Consensus       250 ~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~D  329 (576)
T 2acx_A          250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISD  329 (576)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECC
T ss_pred             EEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEe
Confidence            99987654 8899999999999988753                      699999999999999999999999999999


Q ss_pred             ccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHHcC
Q psy3166         141 FGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP----LCRIVHYLSTG  216 (228)
Q Consensus       141 fg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~----~~~~~~~~~~~  216 (228)
                      ||++..+.....    .....||+.|+|||++.+..++.++|+|||||++|+|++ |..||.+..    ..++.+.+...
T Consensus       330 FGla~~~~~~~~----~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLlt-G~~PF~~~~~~~~~~~i~~~i~~~  404 (576)
T 2acx_A          330 LGLAVHVPEGQT----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA-GQSPFQQRKKKIKREEVERLVKEV  404 (576)
T ss_dssp             CTTCEECCTTCC----EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHH-SSCSSSCSSSCCCHHHHHHHHHHC
T ss_pred             cccceecccCcc----ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHh-CCCCCcccccchhHHHHHHHhhcc
Confidence            999976543321    123578899999999998889999999999999999999 999998753    23445555544


Q ss_pred             CCCCCCCCCCC
Q psy3166         217 YRMERPASCNE  227 (228)
Q Consensus       217 ~~~~~p~~~~~  227 (228)
                       +...|..+++
T Consensus       405 -~~~~p~~~s~  414 (576)
T 2acx_A          405 -PEEYSERFSP  414 (576)
T ss_dssp             -CCCCCTTSCH
T ss_pred             -cccCCccCCH
Confidence             5555655543


No 96 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=1.4e-38  Score=256.65  Aligned_cols=215  Identities=33%  Similarity=0.589  Sum_probs=171.1

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      .+..++|++.+.||+|+||.||+|++...     +..++..||+|.++..........+.+|+.+++++ +||||+++++
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~   90 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPE-----GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKG   90 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTT-----SSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccc-----cCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeee
Confidence            35567799999999999999999986432     34567789999997654444456788999999999 9999999999


Q ss_pred             EEEcC---ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          86 CCYKD---ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        86 ~~~~~---~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++...   .++++||++++++|.+++..                     .|||+++|+|+||||+||+++.++.++|+||
T Consensus        91 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Df  170 (302)
T 4e5w_A           91 ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDF  170 (302)
T ss_dssp             EEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCC
T ss_pred             EEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcc
Confidence            98753   37899999999999999843                     6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---------------CH
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI---------------PL  206 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~---------------~~  206 (228)
                      |++.................++..|+|||.+.+..++.++|+||+|+++|+|++ |..|+...               ..
T Consensus       171 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~  249 (302)
T 4e5w_A          171 GLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-YCDSDSSPMALFLKMIGPTHGQMTV  249 (302)
T ss_dssp             TTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT-TTCGGGSHHHHHHHHHCSCCGGGHH
T ss_pred             cccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHH-ccCCCcchhhHHhhccCCcccccCH
Confidence            998766444322223344567778999999988888999999999999999999 98875332               22


Q ss_pred             HHHHHHHHcCCCCCCCCCCCC
Q psy3166         207 CRIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       207 ~~~~~~~~~~~~~~~p~~~~~  227 (228)
                      ..+...+..+.+.+.|..+|+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~  270 (302)
T 4e5w_A          250 TRLVNTLKEGKRLPCPPNCPD  270 (302)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCH
T ss_pred             HHHHHHHhccCCCCCCCCCCH
Confidence            344666777888888887764


No 97 
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1e-37  Score=250.90  Aligned_cols=210  Identities=39%  Similarity=0.734  Sum_probs=173.9

Q ss_pred             ceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEcC
Q psy3166          11 RLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKD   90 (228)
Q Consensus        11 ~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   90 (228)
                      .|.+.+.||+|+||.||+|.+..+      ...+..+|+|.++........+.+.+|+.+++++ +||||+++++++...
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~------~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   94 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQ------AQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPP   94 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECS------SSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCS
T ss_pred             EEccCceeccCCCceEEEEEEecC------CCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecC
Confidence            445679999999999999986442      2344569999998666666677889999999999 999999999998653


Q ss_pred             c--eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccc
Q psy3166          91 E--LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI  147 (228)
Q Consensus        91 ~--~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~  147 (228)
                      .  .+++||++.+++|.+++..                     .|||++||+|+||||+||+++.++.+||+|||++..+
T Consensus        95 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  174 (298)
T 3pls_A           95 EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDI  174 (298)
T ss_dssp             SSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred             CCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence            3  4899999999999998764                     6999999999999999999999999999999999755


Q ss_pred             cccccc-cCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q psy3166         148 YEQNVF-QNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN  226 (228)
Q Consensus       148 ~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~  226 (228)
                      ...... ........++..|+|||.+.+..++.++|+||||+++|+|++.|.+||...+..++...+..+.+++.|..+|
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (298)
T 3pls_A          175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCP  254 (298)
T ss_dssp             TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCC
T ss_pred             cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccch
Confidence            443221 1223345667889999999988899999999999999999995566678888888888899988888888776


Q ss_pred             C
Q psy3166         227 E  227 (228)
Q Consensus       227 ~  227 (228)
                      +
T Consensus       255 ~  255 (298)
T 3pls_A          255 D  255 (298)
T ss_dssp             H
T ss_pred             H
Confidence            4


No 98 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=1.8e-38  Score=258.20  Aligned_cols=193  Identities=30%  Similarity=0.506  Sum_probs=145.3

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      ..++|++.+.||+|+||.||+|.         +..++..||+|.++..........+.+|+.+++++ +||||+++++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~---------~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~   72 (317)
T 2pmi_A            3 SSSQFKQLEKLGNGTYATVYKGL---------NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVI   72 (317)
T ss_dssp             ----------------CEEEEEE---------CSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEE
T ss_pred             cccceeEeeEECCCCCEEEEEEE---------ECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEE
Confidence            45799999999999999999998         44456679999987554333345678999999999 999999999998


Q ss_pred             EcCc-eEEEEecCCCCcHHHHHHH--------------------------hcccCCCCcccCCCCCCEeecCCCcEEEee
Q psy3166          88 YKDE-LRLVVEYCALGDLQSYLRE--------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISD  140 (228)
Q Consensus        88 ~~~~-~~lv~e~~~~~~L~~~l~~--------------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~d  140 (228)
                      ..++ .++||||+. ++|.+++..                          .|||++||+||||||+||+++.++.+||+|
T Consensus        73 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~D  151 (317)
T 2pmi_A           73 HTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGD  151 (317)
T ss_dssp             CCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECC
T ss_pred             EECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECc
Confidence            7654 889999997 588887643                          599999999999999999999999999999


Q ss_pred             ccCcccccccccccCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         141 FGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       141 fg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      ||++.......   .......+|..|+|||++.+. .++.++|+|||||++|+|++ |..||.+.+..+....+.+
T Consensus       152 fg~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~  223 (317)
T 2pmi_A          152 FGLARAFGIPV---NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT-GKPLFPGTNDEEQLKLIFD  223 (317)
T ss_dssp             CSSCEETTSCC---CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHH
T ss_pred             CccceecCCCc---ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Confidence            99987553221   112335678889999998764 58999999999999999999 9999999888877766543


No 99 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.3e-38  Score=256.45  Aligned_cols=193  Identities=25%  Similarity=0.387  Sum_probs=162.4

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH-----HHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-----KTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .++|++.+.||+|+||.||+|+.         ..++..||+|.++.....     .....+.+|+.+|+++ +||||+++
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~   79 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCRE---------KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITL   79 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEE---------TTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred             ccceEeceEEeeCCCeEEEEEEE---------CCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcE
Confidence            35799999999999999999984         345567999998654221     1346788999999999 99999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCC----cEEE
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPH----VVKI  138 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~----~~kl  138 (228)
                      ++++.... .++||||+++++|.+++..                    .|||+++|+||||||+||+++.++    .+||
T Consensus        80 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl  159 (326)
T 2y0a_A           80 HEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI  159 (326)
T ss_dssp             EEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred             EEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEE
Confidence            99987654 8899999999999998753                    699999999999999999998877    8999


Q ss_pred             eeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         139 SDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      +|||++..+....    ......||..|+|||++....++.++|+|||||++|+|++ |..||.+.+..+....+...
T Consensus       160 ~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~~~~~  232 (326)
T 2y0a_A          160 IDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANVSAV  232 (326)
T ss_dssp             CCCTTCEECCTTS----CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SCCSSCCSSHHHHHHHHHHT
T ss_pred             EECCCCeECCCCC----ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHH-CcCCCCCCCHHHHHHHHHhc
Confidence            9999987553322    1234567889999999988889999999999999999999 99999998888777776655


No 100
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.5e-38  Score=264.03  Aligned_cols=195  Identities=28%  Similarity=0.452  Sum_probs=151.7

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||.||+|.+         ..++..||+|.+... .......+..+|+.+++++.+||||+++++++.
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~   79 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSID---------RRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLR   79 (388)
T ss_dssp             TTEEEEEC-------CEEEEEE---------TTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             CceEEEEEeeeCCCeEEEEEEE---------CCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEe
Confidence            6899999999999999999984         445567999998644 344556778899999999956999999999986


Q ss_pred             cC---ceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCccc
Q psy3166          89 KD---ELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED  146 (228)
Q Consensus        89 ~~---~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~  146 (228)
                      ..   .+++||||+. ++|.+++..                   .|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        80 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  158 (388)
T 3oz6_A           80 ADNDRDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRS  158 (388)
T ss_dssp             CTTSSCEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             cCCCCEEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence            43   4899999997 588887654                   699999999999999999999999999999999875


Q ss_pred             ccccccc------------------cCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy3166         147 IYEQNVF------------------QNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC  207 (228)
Q Consensus       147 ~~~~~~~------------------~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~  207 (228)
                      +......                  ........||..|+|||++.+ ..++.++||||+||++|+|++ |..||.+.+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~  237 (388)
T 3oz6_A          159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC-GKPIFPGSSTM  237 (388)
T ss_dssp             SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHH
T ss_pred             ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCCHH
Confidence            4321100                  011233578889999999886 568999999999999999999 99999999888


Q ss_pred             HHHHHHHc
Q psy3166         208 RIVHYLST  215 (228)
Q Consensus       208 ~~~~~~~~  215 (228)
                      +.+.++..
T Consensus       238 ~~~~~i~~  245 (388)
T 3oz6_A          238 NQLERIIG  245 (388)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            77776654


No 101
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=1.4e-38  Score=271.57  Aligned_cols=205  Identities=29%  Similarity=0.461  Sum_probs=169.6

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      +..++|++.+.||+|+||.||+|+.         ..++..||+|.++....  ......+.+|+.+++.+ +||||++++
T Consensus        13 ~~~~~Y~l~~~LG~G~fg~V~~a~~---------~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~   82 (476)
T 2y94_A           13 VKIGHYILGDTLGVGTFGKVKVGKH---------ELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLY   82 (476)
T ss_dssp             CEETTEEEEEEEECCSSSCEEEEEE---------TTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred             ceecCEEEEEEEeeCCCeEEEEEEE---------CCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEE
Confidence            4567999999999999999999984         44556799999864311  11235678999999999 999999999


Q ss_pred             eEEEcC-ceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          85 GCCYKD-ELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        85 ~~~~~~-~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      +++... .+++||||+++++|.+++..                    .|||+++|+||||||+||+++.++.+||+|||+
T Consensus        83 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~  162 (476)
T 2y94_A           83 QVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL  162 (476)
T ss_dssp             EEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSS
T ss_pred             EEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccc
Confidence            998764 48899999999999998753                    699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIY-TNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      +........    .....||+.|+|||++.+..+ +.++|+||+||++|+|++ |..||.+.+..++..++..+ ....|
T Consensus       163 a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~-~~~~p  236 (476)
T 2y94_A          163 SNMMSDGEF----LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC-GTLPFDDDHVPTLFKKICDG-IFYTP  236 (476)
T ss_dssp             CEECCTTCC----BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH-SSCSSCCSSSHHHHHHHHTT-CCCCC
T ss_pred             hhhcccccc----ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhh-CCCCCCCCCHHHHHHHHhcC-CcCCC
Confidence            876543221    224567889999999987765 689999999999999999 99999998888888888877 45566


Q ss_pred             CCCCC
Q psy3166         223 ASCNE  227 (228)
Q Consensus       223 ~~~~~  227 (228)
                      ..+++
T Consensus       237 ~~~s~  241 (476)
T 2y94_A          237 QYLNP  241 (476)
T ss_dssp             TTCCH
T ss_pred             ccCCH
Confidence            66553


No 102
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=6.5e-38  Score=261.58  Aligned_cols=201  Identities=21%  Similarity=0.290  Sum_probs=163.4

Q ss_pred             cCCCCCCceeeeeeeeee--cCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCce
Q psy3166           4 SCGYPPERLILGEVLGQG--EFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHI   80 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g--~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni   80 (228)
                      +.-...++|++.+.||+|  +||.||+|+..         .++..||+|.++... .......+.+|+.+++++ +||||
T Consensus        19 ~~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni   88 (389)
T 3gni_B           19 SFLPEGGCYELLTVIGKGFEDLMTVNLARYK---------PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNI   88 (389)
T ss_dssp             CCCCCGGGEEEEEEEEEETTTTEEEEEEEET---------TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTB
T ss_pred             cccCCCCcEEEEecccCCcCCceEEEEEEEc---------CCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCC
Confidence            344677899999999999  99999999843         455679999987553 344556788899999999 99999


Q ss_pred             EEeeeEEEcCc-eEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEE
Q psy3166          81 VSFIGCCYKDE-LRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVK  137 (228)
Q Consensus        81 ~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~k  137 (228)
                      +++++++..+. +++||||+++++|.+++..                      .|||+++|+||||||+|||++.++.+|
T Consensus        89 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~k  168 (389)
T 3gni_B           89 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVY  168 (389)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred             CcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence            99999987654 8899999999999998754                      699999999999999999999999999


Q ss_pred             EeeccCcccccccccc----cCCCCCCCCcceeeccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy3166         138 ISDFGLSEDIYEQNVF----QNGEPSEKLPIRWLALESLVS--NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVH  211 (228)
Q Consensus       138 l~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~~Pe~~~~--~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~  211 (228)
                      |+|||.+.........    ........||..|+|||++.+  ..++.++|+|||||++|+|++ |..||.+.+..+...
T Consensus       169 l~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~  247 (389)
T 3gni_B          169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN-GHVPFKDMPATQMLL  247 (389)
T ss_dssp             ECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHH-SSCTTTTCCSTTHHH
T ss_pred             EcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHH-CCCCCCCCCHHHHHH
Confidence            9999987644332211    112223467888999999987  568999999999999999999 999999877666654


Q ss_pred             HHHc
Q psy3166         212 YLST  215 (228)
Q Consensus       212 ~~~~  215 (228)
                      .+..
T Consensus       248 ~~~~  251 (389)
T 3gni_B          248 EKLN  251 (389)
T ss_dssp             HC--
T ss_pred             HHhc
Confidence            4433


No 103
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=7.3e-38  Score=252.70  Aligned_cols=207  Identities=24%  Similarity=0.465  Sum_probs=173.7

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      -+.++|++.+.||+|+||.||+|+.         ..++..||+|.+...........+.+|+.+++++ +||||++++++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~   88 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGID---------NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGS   88 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEE---------TTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEE---------CCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEE
Confidence            3456799999999999999999984         3345579999987654444457788999999999 99999999998


Q ss_pred             EEcC-ceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCccc
Q psy3166          87 CYKD-ELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED  146 (228)
Q Consensus        87 ~~~~-~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~  146 (228)
                      +..+ ..+++||++++++|.+++..                   .|||++||+|+||||+||+++.++.++|+|||++..
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~  168 (303)
T 3a7i_A           89 YLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ  168 (303)
T ss_dssp             EEETTEEEEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EecCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeeccccee
Confidence            8764 47899999999999998753                   699999999999999999999999999999999875


Q ss_pred             ccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Q psy3166         147 IYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPASCN  226 (228)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~  226 (228)
                      +.....   ......++..|+|||.+.+..++.++|+||||+++|+|++ |..||......+....+..+.++..+..+|
T Consensus       169 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (303)
T 3a7i_A          169 LTDTQI---KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVLFLIPKNNPPTLEGNYS  244 (303)
T ss_dssp             CBTTBC---CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSCCCCCCSSCC
T ss_pred             cCcccc---ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHcc-CCCCCCCcCHHHHHHHhhcCCCCCCccccC
Confidence            543321   1234567888999999998889999999999999999999 999999988888887887777777776665


Q ss_pred             C
Q psy3166         227 E  227 (228)
Q Consensus       227 ~  227 (228)
                      +
T Consensus       245 ~  245 (303)
T 3a7i_A          245 K  245 (303)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 104
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=2.6e-38  Score=269.66  Aligned_cols=191  Identities=24%  Similarity=0.323  Sum_probs=154.3

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||+||+|.         +..+++.||+|++.... ......++.+|+.+|+.+ +||||+++++++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~---------~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~  131 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAY---------DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFT  131 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEE---------ETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEC
T ss_pred             CCeEEEEEeecCCCeEEEEEE---------ECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEc
Confidence            689999999999999999998         44556689999987542 344566788999999999 9999999999985


Q ss_pred             cC-------ceEEEEecCCCCcHHHHHHH------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          89 KD-------ELRLVVEYCALGDLQSYLRE------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        89 ~~-------~~~lv~e~~~~~~L~~~l~~------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      ..       .+++||||+.++ +.+.+..                  .|||++||+||||||+|||++.++.+||+|||+
T Consensus       132 ~~~~~~~~~~~~lv~E~~~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~  210 (464)
T 3ttj_A          132 PQKTLEEFQDVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL  210 (464)
T ss_dssp             SCCSTTTCCEEEEEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred             cCCccccCCeEEEEEeCCCCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEe
Confidence            43       368999999764 5544321                  799999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      ++......    ......||..|+|||++.+..++.++||||+||++|+|++ |..||.+.+..+.+..+.+.
T Consensus       211 a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pF~g~~~~~~~~~i~~~  278 (464)
T 3ttj_A          211 ARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQ  278 (464)
T ss_dssp             C-----CC----CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHH
T ss_pred             eeecCCCc----ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHh
Confidence            97553321    1234567888999999999899999999999999999999 99999998887777666553


No 105
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=8.5e-39  Score=260.88  Aligned_cols=187  Identities=28%  Similarity=0.418  Sum_probs=151.7

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .++|++.+.||+|+||+||+|+..         .++..||+|.+.........+.+.+|+.+++.+ +||||+++++++.
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~   75 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNR---------VTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRR   75 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEEC---------CCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEe
Confidence            379999999999999999999843         445579999987554333345678999999999 9999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccc
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI  147 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~  147 (228)
                      .+. .++||||+++++|.+++..                    .|||++||+||||||+||+++.++.+||+|||++..+
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  155 (323)
T 3tki_A           76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF  155 (323)
T ss_dssp             CSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeecccee
Confidence            755 7899999999999877543                    6999999999999999999999999999999999755


Q ss_pred             cccccccCCCCCCCCcceeecccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy3166         148 YEQNVFQNGEPSEKLPIRWLALESLVSNIY-TNKSDVWSFGVVLWEIVTLGANPYPHIPLC  207 (228)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Diwslg~~~~~l~t~g~~pf~~~~~~  207 (228)
                      ..... ........||..|+|||++.+..+ +.++|+||+||++|+|++ |..||......
T Consensus       156 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~  214 (323)
T 3tki_A          156 RYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPWDQPSDS  214 (323)
T ss_dssp             EETTE-ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHH-SSCSCSSSCTT
T ss_pred             ccCCc-ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHh-CCCCCCCCchH
Confidence            33221 112234578889999999987765 678999999999999999 99999876553


No 106
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=4.3e-38  Score=256.78  Aligned_cols=213  Identities=37%  Similarity=0.589  Sum_probs=174.7

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      +..++|++.+.||+|+||.||+|++...     +..++..||+|.+... .....+.+.+|+++++++ +||||++++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~   92 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPL-----GDNTGALVAVKQLQHS-GPDQQRDFQREIQILKAL-HSDFIVKYRGV   92 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTT-----SSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccC-----CCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhc-CCCceeEEEEE
Confidence            6778999999999999999999985432     3456678999998755 344556788999999999 99999999998


Q ss_pred             EEc---CceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          87 CYK---DELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        87 ~~~---~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      +..   ...++||||+++++|.+++..                     .|||+++|+|+||||+||+++.++.+||+|||
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg  172 (327)
T 3lxl_A           93 SYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG  172 (327)
T ss_dssp             EECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGG
T ss_pred             EecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccc
Confidence            763   337899999999999998764                     59999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---------------H
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL---------------C  207 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~---------------~  207 (228)
                      ++.................++..|+|||.+.+..++.++|+||||+++|+|++ |..||.....               .
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~  251 (327)
T 3lxl_A          173 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT-YCDKSCSPSAEFLRMMGCERDVPALS  251 (327)
T ss_dssp             GCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHT-TTCGGGSHHHHHHHHCC----CCHHH
T ss_pred             cceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHh-CCCCCccccchhhhhcccccccccHH
Confidence            99765443322223344567788999999988888999999999999999999 9999865433               3


Q ss_pred             HHHHHHHcCCCCCCCCCCCC
Q psy3166         208 RIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       208 ~~~~~~~~~~~~~~p~~~~~  227 (228)
                      ++...+..+.+++.|..+|+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~  271 (327)
T 3lxl_A          252 RLLELLEEGQRLPAPPACPA  271 (327)
T ss_dssp             HHHHHHHTTCCCCCCTTCCH
T ss_pred             HHHHHhhcccCCCCCCcccH
Confidence            44566777778888877774


No 107
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-37  Score=259.94  Aligned_cols=192  Identities=19%  Similarity=0.327  Sum_probs=161.7

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .++|++.+.||+|+||.||+|...         .++..||+|.+.... ......+.+|+.+|+++ +||||+++++++.
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~---------~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~  118 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEK---------ATGRVFVAKFINTPY-PLDKYTVKNEISIMNQL-HHPKLINLHDAFE  118 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEEC---------CCCCEEEEEEecccc-hhhHHHHHHHHHHHHhC-CCcCCCeEEEEEE
Confidence            468999999999999999999843         445579999987542 33445788999999999 9999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecC--CCcEEEeeccCc
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSS--PHVVKISDFGLS  144 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~--~~~~kl~dfg~~  144 (228)
                      ... .++||||+.+++|.+++..                     .|||++||+||||||+||+++.  .+.+||+|||++
T Consensus       119 ~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a  198 (387)
T 1kob_A          119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLA  198 (387)
T ss_dssp             CSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTC
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccc
Confidence            654 8899999999999988643                     6999999999999999999974  468999999999


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      ..+......    ....+|..|+|||++.+..++.++|+|||||++|+|++ |..||.+.+..+....+..+
T Consensus       199 ~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~  265 (387)
T 1kob_A          199 TKLNPDEIV----KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGEDDLETLQNVKRC  265 (387)
T ss_dssp             EECCTTSCE----EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH-SCCSSCCSSHHHHHHHHHHC
T ss_pred             eecCCCcce----eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHh-CCCCCCCCCHHHHHHHHHhC
Confidence            765433211    12357888999999998889999999999999999999 99999998888888777765


No 108
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=6.5e-38  Score=254.32  Aligned_cols=191  Identities=28%  Similarity=0.461  Sum_probs=153.9

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC-HHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD-AKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++.+.||+|+||+||+|+..+          +..||+|.++.... ......+.+|+++++++ +||||+++++++
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~----------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~   88 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQ----------GRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVI   88 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETT----------SCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECC----------CCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEE
Confidence            4799999999999999999998532          34699999875432 22346778999999999 999999999998


Q ss_pred             EcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166          88 YKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus        88 ~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      .... .++||||+++ +|.+++..                     .|||++||+||||||+||+++.++.+||+|||++.
T Consensus        89 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  167 (311)
T 3niz_A           89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR  167 (311)
T ss_dssp             CCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             ccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCce
Confidence            7644 8899999975 77776543                     69999999999999999999999999999999987


Q ss_pred             cccccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         146 DIYEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      ......   .......+|..|+|||++.+ ..++.++|+||+||++|+|++ |..||.+.+..+....+..
T Consensus       168 ~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~  234 (311)
T 3niz_A          168 AFGIPV---RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKIFS  234 (311)
T ss_dssp             ETTSCC---C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH-SSCSCCCSSTTTHHHHHHH
T ss_pred             ecCCCc---ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Confidence            553221   11223466788999999876 458999999999999999999 9999999877777666554


No 109
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=4e-38  Score=251.28  Aligned_cols=203  Identities=42%  Similarity=0.772  Sum_probs=167.8

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .|.+..++|++.+.||+|+||.||++...           +..||+|.++...   ..+.+.+|+.+++++ +||||+++
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----------~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~~iv~~   79 (278)
T 1byg_A           15 GWALNMKELKLLQTIGKGEFGDVMLGDYR-----------GNKVAVKCIKNDA---TAQAFLAEASVMTQL-RHSNLVQL   79 (278)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEET-----------TEEEEEEECCCCC-----HHHHHTHHHHTTC-CCTTBCCE
T ss_pred             cccCChhhceEEeEEecCCCceEEEEEEc-----------CCEEEEEEecchh---HHHHHHHHHHHHHhC-CCCCEeeE
Confidence            56788999999999999999999998753           3469999987553   345788999999999 99999999


Q ss_pred             eeEEEc--CceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEe
Q psy3166          84 IGCCYK--DELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKIS  139 (228)
Q Consensus        84 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~  139 (228)
                      ++++..  +..+++||++++++|.+++..                      .|||+++++|+||||+||+++.++.++|+
T Consensus        80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~  159 (278)
T 1byg_A           80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS  159 (278)
T ss_dssp             EEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEEC
T ss_pred             EEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEe
Confidence            998654  348999999999999988754                      58999999999999999999999999999


Q ss_pred             eccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Q psy3166         140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRM  219 (228)
Q Consensus       140 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~  219 (228)
                      |||++.......      ....++..|+|||.+.+..++.++|+||||+++|+|++.|..||...+..++...+..+.++
T Consensus       160 Dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~  233 (278)
T 1byg_A          160 DFGLTKEASSTQ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM  233 (278)
T ss_dssp             CCCC------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC
T ss_pred             eccccccccccc------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC
Confidence            999986443221      12345667999999988889999999999999999997699999999888888899998888


Q ss_pred             CCCCCCCC
Q psy3166         220 ERPASCNE  227 (228)
Q Consensus       220 ~~p~~~~~  227 (228)
                      +.|..+|+
T Consensus       234 ~~~~~~~~  241 (278)
T 1byg_A          234 DAPDGCPP  241 (278)
T ss_dssp             CCCTTCCH
T ss_pred             CCcccCCH
Confidence            88888775


No 110
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=5.1e-38  Score=259.04  Aligned_cols=192  Identities=26%  Similarity=0.432  Sum_probs=156.7

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC----CHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA----DAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      ++|++.+.||+|+||+||+|+.         ..+++.||+|.++...    .....+.+.+|+.+++++ +||||+++++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~   93 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCIN---------RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLE   93 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEE---------TTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEE---------CCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEE
Confidence            5799999999999999999984         3455679999985321    111246788999999999 9999999999


Q ss_pred             EEEcCc-eEEEEecCCCCcHHHHHHH------------------------hcccCCCCcccCCCCCCEeecCCC---cEE
Q psy3166          86 CCYKDE-LRLVVEYCALGDLQSYLRE------------------------EYLSNNKVVHRDLATRNILLSSPH---VVK  137 (228)
Q Consensus        86 ~~~~~~-~~lv~e~~~~~~L~~~l~~------------------------~~lh~~~i~H~~lk~~nil~~~~~---~~k  137 (228)
                      ++..+. +++||||+++++|.+++..                        .|||+++|+||||||+||+++.++   .+|
T Consensus        94 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vk  173 (351)
T 3c0i_A           94 TYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVK  173 (351)
T ss_dssp             EEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEE
T ss_pred             EEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEE
Confidence            987654 7899999999999876642                        699999999999999999998655   499


Q ss_pred             EeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         138 ISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       138 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      |+|||++.........   .....||..|+|||++.+..++.++|+||+||++|+|++ |..||.+. ..++...+.++
T Consensus       174 l~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~-~~~~~~~i~~~  247 (351)
T 3c0i_A          174 LGGFGVAIQLGESGLV---AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS-GCLPFYGT-KERLFEGIIKG  247 (351)
T ss_dssp             ECCCTTCEECCTTSCB---CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCSS-HHHHHHHHHHT
T ss_pred             EecCcceeEecCCCee---ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHH-CCCCCCCc-HHHHHHHHHcC
Confidence            9999999765443211   234568899999999998889999999999999999999 99999885 34556666555


No 111
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=3.4e-38  Score=252.92  Aligned_cols=216  Identities=35%  Similarity=0.660  Sum_probs=166.4

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      ..+..++|++.+.||+|+||.||+|.+....      .....||+|.++...  .....+.+.+|+.+++++ +||||++
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~   85 (291)
T 1u46_A           13 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPS------GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIR   85 (291)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTT------SCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred             cccchhHeeeeeeecCCCceeEEEEEeccCC------CceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCccc
Confidence            3467789999999999999999999864322      233458999987542  234456788999999999 9999999


Q ss_pred             eeeEEEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          83 FIGCCYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      +++++.....++++|++++++|.+++..                     .|||+++++|+||||+||+++.++.+||+||
T Consensus        86 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Df  165 (291)
T 1u46_A           86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF  165 (291)
T ss_dssp             EEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCC
T ss_pred             EEEEEccCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccc
Confidence            9999988889999999999999998754                     5899999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST-GYRME  220 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~-~~~~~  220 (228)
                      |++.................++..|+|||.+.+..++.++|+||||+++|+|++.|..||.+.+..++...+.. +.+++
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~  245 (291)
T 1u46_A          166 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP  245 (291)
T ss_dssp             TTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC
T ss_pred             cccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCC
Confidence            99876543322211222345667899999998888899999999999999999769999999988888777655 44556


Q ss_pred             CCCCCCC
Q psy3166         221 RPASCNE  227 (228)
Q Consensus       221 ~p~~~~~  227 (228)
                      .|..+|+
T Consensus       246 ~~~~~~~  252 (291)
T 1u46_A          246 RPEDCPQ  252 (291)
T ss_dssp             CCTTCCH
T ss_pred             CCcCcCH
Confidence            6666664


No 112
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=2.2e-38  Score=258.54  Aligned_cols=212  Identities=38%  Similarity=0.728  Sum_probs=169.8

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      +.+..++|++.+.||+|+||.||+|+...+.       ....+|+|.++..........+.+|+.+++++.+||||++++
T Consensus        20 p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-------~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~   92 (327)
T 1fvr_A           20 PVLDWNDIKFQDVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL   92 (327)
T ss_dssp             SBCCGGGCEEEEEEECGGGCEEEEEEEEETT-------EEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEE
T ss_pred             ccccHHHccceeeeecCCCceEEEEEEccCC-------cccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhc
Confidence            3477789999999999999999999854322       111359998875544444567889999999998899999999


Q ss_pred             eEEEcCc-eEEEEecCCCCcHHHHHHH------------------------------------hcccCCCCcccCCCCCC
Q psy3166          85 GCCYKDE-LRLVVEYCALGDLQSYLRE------------------------------------EYLSNNKVVHRDLATRN  127 (228)
Q Consensus        85 ~~~~~~~-~~lv~e~~~~~~L~~~l~~------------------------------------~~lh~~~i~H~~lk~~n  127 (228)
                      +++.... .+++||++++++|.+++..                                    .|||+++|+|+||||+|
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  172 (327)
T 1fvr_A           93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN  172 (327)
T ss_dssp             EEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             eeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccce
Confidence            9987654 7899999999999998742                                    58999999999999999


Q ss_pred             EeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy3166         128 ILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC  207 (228)
Q Consensus       128 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~  207 (228)
                      |+++.++.+||+|||++......    .......++..|+|||.+....++.++|+||||+++|+|++.|..||.+.+..
T Consensus       173 Il~~~~~~~kL~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~  248 (327)
T 1fvr_A          173 ILVGENYVAKIADFGLSRGQEVY----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA  248 (327)
T ss_dssp             EEECGGGCEEECCTTCEESSCEE----CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             EEEcCCCeEEEcccCcCcccccc----ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH
Confidence            99999999999999998633221    11122345667999999988888999999999999999997699999999988


Q ss_pred             HHHHHHHcCCCCCCCCCCCC
Q psy3166         208 RIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       208 ~~~~~~~~~~~~~~p~~~~~  227 (228)
                      ++...+..+.+++.|..+|+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~  268 (327)
T 1fvr_A          249 ELYEKLPQGYRLEKPLNCDD  268 (327)
T ss_dssp             HHHHHGGGTCCCCCCTTBCH
T ss_pred             HHHHHhhcCCCCCCCCCCCH
Confidence            88888888888888877764


No 113
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=6e-38  Score=249.92  Aligned_cols=207  Identities=26%  Similarity=0.436  Sum_probs=149.9

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceE
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIV   81 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~   81 (228)
                      +.+...++|++.+.||+|+||.||+|+         +..++..||+|.+....  .......+.+|+.+++++ +||||+
T Consensus         7 ~~~~~~~~y~i~~~lg~G~~g~V~~~~---------~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~   76 (275)
T 2eue_A            7 ADGAHIGNYQIVKTLGEGSFAKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHII   76 (275)
T ss_dssp             -CCCBCCCBCCCC---------EEEEE---------CTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHC-CCTTBC
T ss_pred             CCCCcccceEEEEEEEcCCCEEEEEEE---------ECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhC-CCCCeE
Confidence            446677899999999999999999998         44456679999987542  223345788999999999 999999


Q ss_pred             EeeeEEEcC-ceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEee
Q psy3166          82 SFIGCCYKD-ELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISD  140 (228)
Q Consensus        82 ~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~d  140 (228)
                      ++++++... ..+++||++ ++++.+++..                    .|||++||+|+||||+||+++.++.+||+|
T Consensus        77 ~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~D  155 (275)
T 2eue_A           77 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIAD  155 (275)
T ss_dssp             CEEEEEECSSCEEEEEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECC
T ss_pred             EEEEEEecCCeEEEEehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEee
Confidence            999998764 488999999 6677777643                    699999999999999999999999999999


Q ss_pred             ccCcccccccccccCCCCCCCCcceeecccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Q psy3166         141 FGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIY-TNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRM  219 (228)
Q Consensus       141 fg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~  219 (228)
                      ||++........    .....++..|+|||.+.+..+ +.++|+||+|+++|+|++ |..||.+.+.......+..+ ..
T Consensus       156 fg~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~-~~  229 (275)
T 2eue_A          156 FGLSNIMTDGNF----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC-RRLPFDDESIPVLFKNISNG-VY  229 (275)
T ss_dssp             SSCC-------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHT-CC
T ss_pred             cccceeccCccc----ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhC-CC
Confidence            999875433221    123457788999999987765 689999999999999999 99999998888888777776 55


Q ss_pred             CCCCCCCC
Q psy3166         220 ERPASCNE  227 (228)
Q Consensus       220 ~~p~~~~~  227 (228)
                      +.|..+++
T Consensus       230 ~~~~~~~~  237 (275)
T 2eue_A          230 TLPKFLSP  237 (275)
T ss_dssp             CCCTTSCH
T ss_pred             CCCccCCH
Confidence            66666553


No 114
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.5e-37  Score=249.50  Aligned_cols=202  Identities=32%  Similarity=0.558  Sum_probs=157.0

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      ++.++.++|++.+.||+|+||.||+|...+            .+|+|.++... .....+.+.+|+.+++++ +||||++
T Consensus        18 ~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~------------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~   84 (289)
T 3og7_A           18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG------------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILL   84 (289)
T ss_dssp             CCBCCTTSCEEEEEEEECSSEEEEEEESSS------------EEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCC
T ss_pred             CCccCccceeeeeEecCCCCeEEEEEEEcC------------ceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEE
Confidence            467999999999999999999999997422            38999987553 445567788999999999 9999999


Q ss_pred             eeeEEEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          83 FIGCCYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++......+++||++.+++|.+++..                     .|||+++|+|+||||+||+++.++.++|+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Df  164 (289)
T 3og7_A           85 FMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDF  164 (289)
T ss_dssp             EEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCC
T ss_pred             EEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccc
Confidence            9998777779999999999999988742                     6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHcCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRI-VHYLSTGY  217 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~-~~~~~~~~  217 (228)
                      |++......... .......|+..|+|||.+.   ...++.++|+||||+++|+|++ |..||.+....+. ...+..+.
T Consensus       165 g~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~  242 (289)
T 3og7_A          165 GLATEKSRWSGS-HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMVGRGS  242 (289)
T ss_dssp             C-------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHH-SSCTTSSCCCHHHHHHHHHHTS
T ss_pred             eecccccccccc-ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHH-CCCCccccchHHHHHHHhcccc
Confidence            998654322111 1122346788899999986   5568889999999999999999 9999988655544 55555554


Q ss_pred             CCC
Q psy3166         218 RME  220 (228)
Q Consensus       218 ~~~  220 (228)
                      ..+
T Consensus       243 ~~~  245 (289)
T 3og7_A          243 LSP  245 (289)
T ss_dssp             CCC
T ss_pred             cCc
Confidence            443


No 115
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=9.2e-38  Score=249.33  Aligned_cols=204  Identities=25%  Similarity=0.420  Sum_probs=165.4

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      ....++|++.+.||+|+||.||+|...         .++..||+|.+.....  ......+.+|+.+++++ +||||+++
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~   74 (279)
T 3fdn_A            5 QWALEDFEIGRPLGKGKFGNVYLAREK---------QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRL   74 (279)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCE
T ss_pred             eeecccEEEeeEEecCCCeEEEEEEEc---------cCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcch
Confidence            345679999999999999999999843         3445799999864321  11235678899999999 89999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++.... .+++|||+++++|.+++..                    .|||++||+|+||||+||+++.++.++|+|||
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg  154 (279)
T 3fdn_A           75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG  154 (279)
T ss_dssp             EEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCC
T ss_pred             hheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEecc
Confidence            99987755 7899999999999988764                    69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      ++......     ......++..|+|||.+.+..++.++|+||+|+++|+|++ |..||...+..+....+... ..+.|
T Consensus       155 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~-~~~~~  227 (279)
T 3fdn_A          155 WSVHAPSS-----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV-GKPPFEANTYQETYKRISRV-EFTFP  227 (279)
T ss_dssp             EESCC-------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHT-CCCCC
T ss_pred             ccccCCcc-----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHH-CCCCCCCCcHHHHHHHHHhC-CCCCC
Confidence            87543222     1223466788999999998888999999999999999999 99999998888887777765 55556


Q ss_pred             CCCC
Q psy3166         223 ASCN  226 (228)
Q Consensus       223 ~~~~  226 (228)
                      ..++
T Consensus       228 ~~~~  231 (279)
T 3fdn_A          228 DFVT  231 (279)
T ss_dssp             TTSC
T ss_pred             CcCC
Confidence            5554


No 116
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=3.2e-38  Score=256.74  Aligned_cols=198  Identities=24%  Similarity=0.398  Sum_probs=160.1

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      .+..++|++.+.||+|+||+||+|...         .++..||+|.++..........+.+|+++++++ +||||+++++
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~   74 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHK---------KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFA   74 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEEC---------CCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEE
Confidence            345689999999999999999999853         345579999987553333456678999999999 8999999999


Q ss_pred             EEEcC---ceEEEEecCCCCcHHHHHHH-----------------------hcccCCCCcccCCCCCCEee----cCCCc
Q psy3166          86 CCYKD---ELRLVVEYCALGDLQSYLRE-----------------------EYLSNNKVVHRDLATRNILL----SSPHV  135 (228)
Q Consensus        86 ~~~~~---~~~lv~e~~~~~~L~~~l~~-----------------------~~lh~~~i~H~~lk~~nil~----~~~~~  135 (228)
                      ++...   ..++||||+++++|.+++..                       .|||+++|+||||||+||++    +.++.
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  154 (319)
T 4euu_A           75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSV  154 (319)
T ss_dssp             EEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEE
T ss_pred             EeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCce
Confidence            88653   47899999999999998763                       59999999999999999998    67778


Q ss_pred             EEEeeccCcccccccccccCCCCCCCCcceeecccccc--------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-
Q psy3166         136 VKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV--------SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL-  206 (228)
Q Consensus       136 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~--------~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~-  206 (228)
                      +||+|||++..+.....    .....+|..|+|||++.        +..++.++|+|||||++|+|++ |..||..... 
T Consensus       155 ~kL~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~  229 (319)
T 4euu_A          155 YKLTDFGAARELEDDEQ----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT-GSLPFRPFEGP  229 (319)
T ss_dssp             EEECCCTTCEECCTTCC----BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHH-SSCSEECTTCG
T ss_pred             EEEccCCCceecCCCCc----eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCcc
Confidence            99999999976544321    22356788999999886        4568899999999999999999 9999975433 


Q ss_pred             ---HHHHHHHHcCCC
Q psy3166         207 ---CRIVHYLSTGYR  218 (228)
Q Consensus       207 ---~~~~~~~~~~~~  218 (228)
                         .++...+..+.+
T Consensus       230 ~~~~~~~~~~~~~~p  244 (319)
T 4euu_A          230 RRNKEVMYKIITGKP  244 (319)
T ss_dssp             GGCHHHHHHHHHHCC
T ss_pred             chhHHHHHHHhcCCC
Confidence               455556655543


No 117
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=4.6e-37  Score=247.02  Aligned_cols=205  Identities=24%  Similarity=0.395  Sum_probs=170.3

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC--CCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      ...++|++.+.||+|+||.||++...         .++..||+|.+...  ......+.+.+|+.+++++ +||||++++
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~---------~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~   81 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDA---------DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH   81 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEE
T ss_pred             CcccceEEEEEEeecCCEEEEEEEEC---------CCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeee
Confidence            45679999999999999999999843         34457999998654  2345567788999999999 999999999


Q ss_pred             eEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          85 GCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        85 ~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      +++..+. .+++||++.+++|.+++..                    .|||+++++|+||||+||+++.++.+||+|||+
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  161 (294)
T 2rku_A           82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL  161 (294)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             eeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccC
Confidence            9987755 7899999999999988754                    699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPA  223 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~  223 (228)
                      +........   ......++..|+|||.+.+..++.++|+||+|+++|+|++ |..||......+....+..+ ....|.
T Consensus       162 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~-~~~~~~  236 (294)
T 2rku_A          162 ATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV-GKPPFETSCLKETYLRIKKN-EYSIPK  236 (294)
T ss_dssp             CEECCSTTC---CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHTT-CCCCCT
T ss_pred             ceecccCcc---ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhhc-cCCCcc
Confidence            875432211   1223567788999999988888999999999999999999 99999998888777777665 455566


Q ss_pred             CCC
Q psy3166         224 SCN  226 (228)
Q Consensus       224 ~~~  226 (228)
                      .++
T Consensus       237 ~~~  239 (294)
T 2rku_A          237 HIN  239 (294)
T ss_dssp             TSC
T ss_pred             ccC
Confidence            554


No 118
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=2e-37  Score=248.99  Aligned_cols=191  Identities=26%  Similarity=0.454  Sum_probs=153.8

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||+||+|..         ..++..||+|.++... .......+.+|+.+++++ +||||+++++++.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~   71 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKN---------RETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLH   71 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEE---------TTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEE---------CCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEE
Confidence            6899999999999999999984         3445679999987543 333446788999999999 9999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCccc
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED  146 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~  146 (228)
                      .+. .++|||++.+ ++.+++..                     .|||++||+||||||+||+++.++.+||+|||++..
T Consensus        72 ~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~  150 (292)
T 3o0g_A           72 SDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARA  150 (292)
T ss_dssp             ETTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             eCCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence            654 7899999976 55544332                     699999999999999999999999999999999975


Q ss_pred             ccccccccCCCCCCCCcceeecccccccCC-CCchhhHHHHHHHHHHHHhCCCCC-CCCCCHHHHHHHHHc
Q psy3166         147 IYEQNVFQNGEPSEKLPIRWLALESLVSNI-YTNKSDVWSFGVVLWEIVTLGANP-YPHIPLCRIVHYLST  215 (228)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Diwslg~~~~~l~t~g~~p-f~~~~~~~~~~~~~~  215 (228)
                      .....   .......+|..|+|||++.+.. ++.++|+||+||++|+|++ |..| |.+.+..+....+..
T Consensus       151 ~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~-~~~p~~~~~~~~~~~~~i~~  217 (292)
T 3o0g_A          151 FGIPV---RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN-AGRPLFPGNDVDDQLKRIFR  217 (292)
T ss_dssp             CCSCC---SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTT-TSCCSCCCSSHHHHHHHHHH
T ss_pred             cCCcc---ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHH-cCCCCcCCCCHHHHHHHHHH
Confidence            53221   1223456788899999998665 7999999999999999998 6555 677777776666544


No 119
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=1.2e-37  Score=257.81  Aligned_cols=186  Identities=28%  Similarity=0.401  Sum_probs=144.9

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      +.....++|++.+.||+|+||+||+++.         ..++..||+|.+......  ...+.+|+.+++++ +||||+++
T Consensus        14 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~hpniv~~   81 (361)
T 3uc3_A           14 PIMHDSDRYDFVKDIGSGNFGVARLMRD---------KLTKELVAVKYIERGAAI--DENVQREIINHRSL-RHPNIVRF   81 (361)
T ss_dssp             CCCCCTTTEEEEEEESSSTTSSEEEEEE---------TTTCCEEEEEEEESSTTS--CHHHHHHHHHHHHC-CCTTBCCE
T ss_pred             cCCCCCCcEEEEEEeccCCCEEEEEEEE---------CCCCcEEEEEEEecCccc--cHHHHHHHHHHHhC-CCCCCCcE
Confidence            3445678999999999999999999984         445567999998754322  24577899999999 99999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCc--EEEee
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHV--VKISD  140 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~--~kl~d  140 (228)
                      ++++.... .++||||+.+++|.+++..                    .|||++||+||||||+||+++.++.  +||+|
T Consensus        82 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~D  161 (361)
T 3uc3_A           82 KEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICD  161 (361)
T ss_dssp             EEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECC
T ss_pred             EEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEee
Confidence            99987654 8899999999999998754                    6999999999999999999987664  99999


Q ss_pred             ccCcccccccccccCCCCCCCCcceeecccccccCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         141 FGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNK-SDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       141 fg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~-~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      ||+++......    ......||..|+|||++.+..++.+ +|+||+||++|+|++ |..||.+...
T Consensus       162 fg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~  223 (361)
T 3uc3_A          162 FGYSKSSVLHS----QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEE  223 (361)
T ss_dssp             CCCC-------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHH-SSCSCC----
T ss_pred             cCccccccccC----CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHh-CCCCCCCCcc
Confidence            99986432221    1233567889999999988777655 899999999999999 9999987544


No 120
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=3.6e-37  Score=252.35  Aligned_cols=205  Identities=24%  Similarity=0.400  Sum_probs=169.9

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      ...++|++.+.||+|+||.||++...         .++..||+|.+....  .....+.+.+|+.+++++ +||||++++
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~---------~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~  107 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDA---------DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH  107 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEE
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEEC---------CCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence            34578999999999999999999843         345579999986542  345567788999999999 999999999


Q ss_pred             eEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          85 GCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        85 ~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      +++.... .+++|||+.+++|.+++..                    .|||+++|+|+||||+||+++.++.+||+|||+
T Consensus       108 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~  187 (335)
T 2owb_A          108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL  187 (335)
T ss_dssp             EEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccC
Confidence            9987755 7899999999999988754                    699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERPA  223 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p~  223 (228)
                      +.......   .......++..|+|||++.+..++.++|+||||+++|+|++ |..||......+....+..+ ....|.
T Consensus       188 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~-~~~~~~  262 (335)
T 2owb_A          188 ATKVEYDG---ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV-GKPPFETSCLKETYLRIKKN-EYSIPK  262 (335)
T ss_dssp             CEECCSTT---CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHT-CCCCCT
T ss_pred             ceecccCc---ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHH-CcCCCCCCCHHHHHHHHhcC-CCCCCc
Confidence            87553221   11233567888999999988889999999999999999999 99999998887777776665 445565


Q ss_pred             CCC
Q psy3166         224 SCN  226 (228)
Q Consensus       224 ~~~  226 (228)
                      .++
T Consensus       263 ~~~  265 (335)
T 2owb_A          263 HIN  265 (335)
T ss_dssp             TSC
T ss_pred             cCC
Confidence            554


No 121
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=2.6e-37  Score=251.87  Aligned_cols=196  Identities=26%  Similarity=0.419  Sum_probs=163.6

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ..|...+.||+|+||.||+|+..         .++..||+|.+..... ...+.+.+|+.+++++ +||||+++++++..
T Consensus        45 ~~~~~~~~lg~G~~g~V~~a~~~---------~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~  113 (321)
T 2c30_A           45 LLLDSYVKIGEGSTGIVCLAREK---------HSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDY-QHFNVVEMYKSYLV  113 (321)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEETTTC-CSHHHHHHHHHHHTTC-CCTTBCCEEEEEEE
T ss_pred             hhhhccEEeccCCCeEEEEEEEC---------CCCcEEEEEEEeccch-hHHHHHHHHHHHHHhC-CCCCcceEEEEEEE
Confidence            45788899999999999999843         3455799999875432 2345678999999999 99999999998876


Q ss_pred             C-ceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccccc
Q psy3166          90 D-ELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYE  149 (228)
Q Consensus        90 ~-~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~~~  149 (228)
                      . ..+++|||+++++|.+++..                   .|||+++|+||||||+||+++.++.+||+|||++..+..
T Consensus       114 ~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~  193 (321)
T 2c30_A          114 GEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK  193 (321)
T ss_dssp             TTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeeccc
Confidence            4 58899999999999998753                   699999999999999999999999999999999875543


Q ss_pred             cccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Q psy3166         150 QNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRME  220 (228)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~  220 (228)
                      ...   ......||..|+|||++.+..++.++|+||||+++|+|++ |..||.+.+..+....+.....+.
T Consensus       194 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~  260 (321)
T 2c30_A          194 DVP---KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD-GEPPYFSDSPVQAMKRLRDSPPPK  260 (321)
T ss_dssp             SSC---CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSSCCC
T ss_pred             Ccc---ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCCCC
Confidence            211   1234578889999999998889999999999999999999 999999988887777777664443


No 122
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=7.7e-38  Score=252.10  Aligned_cols=196  Identities=24%  Similarity=0.395  Sum_probs=154.8

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH-------------------------HHH
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-------------------------KTY   61 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------------------~~~   61 (228)
                      +..++|++.+.||+|+||.||+|+.         ..++..||+|.+......                         ...
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~a~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (298)
T 2zv2_A           10 VQLNQYTLKDEIGKGSYGVVKLAYN---------ENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI   80 (298)
T ss_dssp             CEETTEEEEEEEEC--CCEEEEEEE---------TTTTEEEEEEEEECC-------------------------------
T ss_pred             eeecceEEEeEEeecCCEEEEEEEE---------CCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchH
Confidence            4457999999999999999999984         445567999998654211                         113


Q ss_pred             HHHHHHHHHHHhcCCCCceEEeeeEEEc---CceEEEEecCCCCcHHHHHHH-------------------hcccCCCCc
Q psy3166          62 DKFLKEINLMKDVGKHDHIVSFIGCCYK---DELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVV  119 (228)
Q Consensus        62 ~~~~~e~~~l~~l~~h~ni~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~  119 (228)
                      +.+.+|+++++++ +||||+++++++..   +..+++|||+++++|.+++..                   .|||+++|+
T Consensus        81 ~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  159 (298)
T 2zv2_A           81 EQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKII  159 (298)
T ss_dssp             CHHHHHHHHHHTC-CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHhC-CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            4678999999999 99999999999875   347899999998887654211                   799999999


Q ss_pred             ccCCCCCCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCC---CCchhhHHHHHHHHHHHHhC
Q psy3166         120 HRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI---YTNKSDVWSFGVVLWEIVTL  196 (228)
Q Consensus       120 H~~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~---~~~~~Diwslg~~~~~l~t~  196 (228)
                      ||||||+||+++.++.+||+|||++..+......   .....||..|+|||.+.+..   ++.++|+|||||++|+|++ 
T Consensus       160 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~-  235 (298)
T 2zv2_A          160 HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL---LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVF-  235 (298)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCTTCEECSSSSCE---ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHH-
T ss_pred             ccCCCHHHEEECCCCCEEEecCCCcccccccccc---ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHH-
Confidence            9999999999999999999999998765433211   12356788999999987654   3678999999999999999 


Q ss_pred             CCCCCCCCCHHHHHHHHHcC
Q psy3166         197 GANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       197 g~~pf~~~~~~~~~~~~~~~  216 (228)
                      |..||.+....++...+...
T Consensus       236 g~~pf~~~~~~~~~~~~~~~  255 (298)
T 2zv2_A          236 GQCPFMDERIMCLHSKIKSQ  255 (298)
T ss_dssp             SSCSSCCSSHHHHHHHHHHC
T ss_pred             CCCCCCCccHHHHHHHHhcc
Confidence            99999998877776666554


No 123
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2e-37  Score=254.86  Aligned_cols=200  Identities=26%  Similarity=0.419  Sum_probs=151.3

Q ss_pred             CCccCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHH----HHHHHHHHHHHHHhcCC
Q psy3166           1 MALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAK----TYDKFLKEINLMKDVGK   76 (228)
Q Consensus         1 ~~~~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~e~~~l~~l~~   76 (228)
                      ||+..+...++|++.+.||+|+||.||+|.         +..++..||+|.++......    ....+.+|+.+++++ +
T Consensus         1 m~l~~~~~~~~y~~~~~lg~G~~g~Vy~~~---------~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~   70 (346)
T 1ua2_A            1 MALDVKSRAKRYEKLDFLGEGQFATVYKAR---------DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-S   70 (346)
T ss_dssp             ------------CEEEEEEEETTEEEEEEE---------CSSCCSEEEEEEC------------CTHHHHHHHHHHHC-C
T ss_pred             CchhhHHHhcccEEEeEEeecCCEEEEEEE---------ECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-C
Confidence            677788888999999999999999999998         44455679999987542211    123577899999999 9


Q ss_pred             CCceEEeeeEEEcC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCC
Q psy3166          77 HDHIVSFIGCCYKD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPH  134 (228)
Q Consensus        77 h~ni~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~  134 (228)
                      ||||+++++++... ..++|||++.+ +|.+++..                     .|||+++|+||||||+||+++.++
T Consensus        71 h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  149 (346)
T 1ua2_A           71 HPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG  149 (346)
T ss_dssp             CTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             CCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCC
Confidence            99999999998664 58899999976 78777653                     699999999999999999999999


Q ss_pred             cEEEeeccCcccccccccccCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy3166         135 VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYL  213 (228)
Q Consensus       135 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~  213 (228)
                      .+||+|||++..+....   .......+|..|+|||++.+. .++.++|+|||||++|+|++ |..||.+.+..+.+.++
T Consensus       150 ~~kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~~~~~~~~~~~~~~i  225 (346)
T 1ua2_A          150 VLKLADFGLAKSFGSPN---RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRI  225 (346)
T ss_dssp             CEEECCCGGGSTTTSCC---CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHH
T ss_pred             CEEEEecccceeccCCc---ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHH-CCCCCCCCCHHHHHHHH
Confidence            99999999987553321   112335678889999998754 58899999999999999999 99999998887776665


Q ss_pred             Hc
Q psy3166         214 ST  215 (228)
Q Consensus       214 ~~  215 (228)
                      .+
T Consensus       226 ~~  227 (346)
T 1ua2_A          226 FE  227 (346)
T ss_dssp             HH
T ss_pred             HH
Confidence            54


No 124
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=3e-38  Score=257.61  Aligned_cols=196  Identities=27%  Similarity=0.467  Sum_probs=152.3

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||.||+|+..         .++..||+|.++..........+.+|+.+++++ +||||+++++++..
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   71 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSK---------LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHT   71 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEEC---------CCCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEee
Confidence            68999999999999999999843         345579999987543222222445799999999 99999999999876


Q ss_pred             C-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccc
Q psy3166          90 D-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI  147 (228)
Q Consensus        90 ~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~  147 (228)
                      . ..++||||+. ++|.+++..                     .|||++||+||||||+||+++.++.+||+|||++...
T Consensus        72 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~  150 (324)
T 3mtl_A           72 EKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAK  150 (324)
T ss_dssp             SSCEEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC
T ss_pred             CCEEEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccc
Confidence            5 4889999997 488887653                     6999999999999999999999999999999998644


Q ss_pred             cccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Q psy3166         148 YEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRME  220 (228)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~  220 (228)
                      ....   .......++..|+|||++.+ ..++.++|+||+||++|+|++ |..||.+.+..+....+.+....+
T Consensus       151 ~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~  220 (324)
T 3mtl_A          151 SIPT---KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT-GRPLFPGSTVEEQLHFIFRILGTP  220 (324)
T ss_dssp             ---------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             cCCc---cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCC
Confidence            3221   11223466888999999876 568999999999999999999 999999998888877766543333


No 125
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=2.3e-37  Score=250.61  Aligned_cols=199  Identities=32%  Similarity=0.556  Sum_probs=160.4

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      .++.++|++.+.||+|+||.||+|.+.           +..||+|.+...   ...+.+.+|+.+++++ +||||+++++
T Consensus         4 ~i~~~~~~~~~~lg~G~~g~V~~~~~~-----------~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hp~iv~~~~   68 (307)
T 2eva_A            4 MIDYKEIEVEEVVGRGAFGVVCKAKWR-----------AKDVAIKQIESE---SERKAFIVELRQLSRV-NHPNIVKLYG   68 (307)
T ss_dssp             BCCGGGEEEEEEEECCSSSEEEEEEET-----------TEEEEEEECSST---THHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             cCCHhHeeeeeEeecCCCceEEEEEEC-----------CeeEEEEEecCh---hHHHHHHHHHHHHhcC-CCCCcCeEEE
Confidence            578899999999999999999999753           245999998643   2346788999999999 9999999999


Q ss_pred             EEEcCceEEEEecCCCCcHHHHHHH-----------------------hcccC---CCCcccCCCCCCEeecCCCc-EEE
Q psy3166          86 CCYKDELRLVVEYCALGDLQSYLRE-----------------------EYLSN---NKVVHRDLATRNILLSSPHV-VKI  138 (228)
Q Consensus        86 ~~~~~~~~lv~e~~~~~~L~~~l~~-----------------------~~lh~---~~i~H~~lk~~nil~~~~~~-~kl  138 (228)
                      ++. +..++||||+++++|.+++..                       .|||+   ++|+||||||+||+++.++. +||
T Consensus        69 ~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl  147 (307)
T 2eva_A           69 ACL-NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKI  147 (307)
T ss_dssp             BCT-TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEE
T ss_pred             EEc-CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEE
Confidence            765 558899999999999998763                       58999   89999999999999998876 899


Q ss_pred             eeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcC
Q psy3166         139 SDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL--CRIVHYLSTG  216 (228)
Q Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~--~~~~~~~~~~  216 (228)
                      +|||++......      .....|+..|+|||++.+..++.++|+||||+++|+|++ |..||.....  ..+...+..+
T Consensus       148 ~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~  220 (307)
T 2eva_A          148 CDFGTACDIQTH------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEIGGPAFRIMWAVHNG  220 (307)
T ss_dssp             CCCCC------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHH-TCCTTTTTCSSHHHHHHHHHTT
T ss_pred             cccccccccccc------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHH-CCCCchhhCccHHHHHHHHhcC
Confidence            999998644322      122457788999999998889999999999999999999 9999986533  3455667777


Q ss_pred             CCCCCCCCCCC
Q psy3166         217 YRMERPASCNE  227 (228)
Q Consensus       217 ~~~~~p~~~~~  227 (228)
                      .+++.+..+|+
T Consensus       221 ~~~~~~~~~~~  231 (307)
T 2eva_A          221 TRPPLIKNLPK  231 (307)
T ss_dssp             CCCCCBTTCCH
T ss_pred             CCCCcccccCH
Confidence            78888777764


No 126
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=3.5e-37  Score=246.58  Aligned_cols=204  Identities=22%  Similarity=0.371  Sum_probs=168.5

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||.||+|..         ..++..||+|.+.....  ......+.+|+.+++++ +||||+++
T Consensus        10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~   79 (284)
T 2vgo_A           10 KFTIDDFDIGRPLGKGKFGNVYLARE---------KQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRM   79 (284)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCE
T ss_pred             chhhhhceeeheecCCCCeEEEEEEE---------cCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeE
Confidence            46678999999999999999999984         33456799999864311  11235678899999999 99999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++.... .+++||++++++|.+++..                    .|||+++|+|+||||+||+++.++.++|+|||
T Consensus        80 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg  159 (284)
T 2vgo_A           80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG  159 (284)
T ss_dssp             EEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred             EEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEeccc
Confidence            99987654 7899999999999988764                    69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      ++......     ......++..|+|||.+.+..++.++|+||||+++|+|++ |..||...+..+....+... ..+.|
T Consensus       160 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~-~~~~~  232 (284)
T 2vgo_A          160 WSVHAPSL-----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV-GMPPFDSPSHTETHRRIVNV-DLKFP  232 (284)
T ss_dssp             TCEECSSS-----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHTT-CCCCC
T ss_pred             ccccCccc-----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHH-CCCCCCCCCHhHHHHHHhcc-ccCCC
Confidence            88644321     1223567888999999998889999999999999999999 99999998888777777665 45566


Q ss_pred             CCCC
Q psy3166         223 ASCN  226 (228)
Q Consensus       223 ~~~~  226 (228)
                      ..++
T Consensus       233 ~~~~  236 (284)
T 2vgo_A          233 PFLS  236 (284)
T ss_dssp             TTSC
T ss_pred             CcCC
Confidence            5554


No 127
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=1.4e-36  Score=242.79  Aligned_cols=193  Identities=25%  Similarity=0.455  Sum_probs=162.8

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++.+.||+|+||.||+|...         .++..||+|.+.... .......+.+|+.+++++ +||||+++++++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~   74 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHK---------TTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSI   74 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEc---------CCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEE
Confidence            478999999999999999999843         445579999986543 445557788999999999 999999999998


Q ss_pred             EcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCc---EEEeeccC
Q psy3166          88 YKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHV---VKISDFGL  143 (228)
Q Consensus        88 ~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~---~kl~dfg~  143 (228)
                      ..+. .+++||++++++|.+++..                    .|||+++|+|+||||+||+++.++.   +||+|||.
T Consensus        75 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~  154 (284)
T 3kk8_A           75 QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL  154 (284)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             EcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeecee
Confidence            7655 7899999999999887654                    6999999999999999999986554   99999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      +........    .....++..|+|||.+.+..++.++|+||+|+++|+|++ |..||.+.+..+....+..+
T Consensus       155 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~~~~~~~~~  222 (284)
T 3kk8_A          155 AIEVNDSEA----WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV-GYPPFWDEDQHRLYAQIKAG  222 (284)
T ss_dssp             CEECCSSCB----CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHT
T ss_pred             eEEcccCcc----ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHH-CCCCCCCCchhHHHHHHHhc
Confidence            865433221    123567889999999998889999999999999999999 99999998888887777665


No 128
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=1.1e-37  Score=253.99  Aligned_cols=181  Identities=22%  Similarity=0.430  Sum_probs=148.6

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||.||+|+..         .++..||+|.++........+.+.+|+.+|+++ +||||+++++++..
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~---------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~   75 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNK---------VDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLE   75 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEET---------TTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEE
T ss_pred             hcCceeeEecCCCCeEEEEEEEc---------CCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEE
Confidence            57999999999999999999843         345579999997655455567889999999999 99999999998743


Q ss_pred             Cc----------------------------------------------------------eEEEEecCCCCcHHHHHHH-
Q psy3166          90 DE----------------------------------------------------------LRLVVEYCALGDLQSYLRE-  110 (228)
Q Consensus        90 ~~----------------------------------------------------------~~lv~e~~~~~~L~~~l~~-  110 (228)
                      ..                                                          .+++|||+++++|.+++.. 
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  155 (332)
T 3qd2_B           76 TPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR  155 (332)
T ss_dssp             CCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC
T ss_pred             eccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc
Confidence            21                                                          6899999999999998753 


Q ss_pred             ----------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccccccccc---------cCCCCC
Q psy3166         111 ----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVF---------QNGEPS  159 (228)
Q Consensus       111 ----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~---------~~~~~~  159 (228)
                                            .|||+++|+||||||+||+++.++.+||+|||++..+......         ......
T Consensus       156 ~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~  235 (332)
T 3qd2_B          156 CSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTG  235 (332)
T ss_dssp             CSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCS
T ss_pred             cCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccc
Confidence                                  6999999999999999999999999999999998765443211         011234


Q ss_pred             CCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q psy3166         160 EKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY  201 (228)
Q Consensus       160 ~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf  201 (228)
                      ..||..|+|||.+.+..++.++|+||+||++|+|++ |..|+
T Consensus       236 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-~~~~~  276 (332)
T 3qd2_B          236 QVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY-SFSTQ  276 (332)
T ss_dssp             CC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHS-CCCCH
T ss_pred             cCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHH-cCCCh
Confidence            568889999999998889999999999999999998 76654


No 129
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=7.4e-38  Score=249.66  Aligned_cols=206  Identities=24%  Similarity=0.397  Sum_probs=169.6

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      ..++|++.+.||+|+||.||++...         .+++.||+|.+.... .....+.+.+|+.+++++ +||||++++++
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~   73 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRK---------SDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDR   73 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEET---------TTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred             chhheeeehhccCCCCcEEEEEEEC---------CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEE
Confidence            3579999999999999999999843         345579999987543 445567788999999999 99999999998


Q ss_pred             EEc---CceEEEEecCCCCcHHHHHHH------------------------hcccCCC-----CcccCCCCCCEeecCCC
Q psy3166          87 CYK---DELRLVVEYCALGDLQSYLRE------------------------EYLSNNK-----VVHRDLATRNILLSSPH  134 (228)
Q Consensus        87 ~~~---~~~~lv~e~~~~~~L~~~l~~------------------------~~lh~~~-----i~H~~lk~~nil~~~~~  134 (228)
                      +..   ...+++|||+++++|.+++..                        .|||+++     |+|+||||+||+++.++
T Consensus        74 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~  153 (279)
T 2w5a_A           74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ  153 (279)
T ss_dssp             EEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSS
T ss_pred             EecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCC
Confidence            753   348899999999999998753                        5899999     99999999999999999


Q ss_pred             cEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy3166         135 VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS  214 (228)
Q Consensus       135 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~  214 (228)
                      .+||+|||++..........   ....++..|+|||.+.+..++.++|+||||+++|+|++ |..||...+..++...+.
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~i~  229 (279)
T 2w5a_A          154 NVKLGDFGLARILNHDTSFA---KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA-LMPPFTAFSQKELAGKIR  229 (279)
T ss_dssp             CEEECCCCHHHHC---CHHH---HHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHH
T ss_pred             CEEEecCchheeeccccccc---cccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHH-CCCCCcccCHHHHHHHHh
Confidence            99999999886543321110   11245667999999988889999999999999999999 999999998888888899


Q ss_pred             cCCCCCCCCCCCC
Q psy3166         215 TGYRMERPASCNE  227 (228)
Q Consensus       215 ~~~~~~~p~~~~~  227 (228)
                      .+..++.|..+|+
T Consensus       230 ~~~~~~~~~~~~~  242 (279)
T 2w5a_A          230 EGKFRRIPYRYSD  242 (279)
T ss_dssp             HTCCCCCCTTSCH
T ss_pred             hcccccCCcccCH
Confidence            9888788877764


No 130
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=3.1e-37  Score=247.10  Aligned_cols=204  Identities=31%  Similarity=0.551  Sum_probs=162.3

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH---HHH---HHHHHHHHHHHhcCCCCc
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA---KTY---DKFLKEINLMKDVGKHDH   79 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~---~~~~~e~~~l~~l~~h~n   79 (228)
                      .+..++|++.+.||+|+||.||+|++.         .++..||+|.+......   ...   +.+.+|+.+++++ +|||
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~   84 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGRLV---------KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPN   84 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEEET---------TTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTT
T ss_pred             hhhhccceehhccccCCceeEEEEEEc---------CCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCC
Confidence            467899999999999999999999853         34557999998644221   111   5688999999999 9999


Q ss_pred             eEEeeeEEEcCceEEEEecCCCCcHHHHHHH---------------------hcccCCC--CcccCCCCCCEeecCCCc-
Q psy3166          80 IVSFIGCCYKDELRLVVEYCALGDLQSYLRE---------------------EYLSNNK--VVHRDLATRNILLSSPHV-  135 (228)
Q Consensus        80 i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~--i~H~~lk~~nil~~~~~~-  135 (228)
                      |+++++++.... +++|||+++++|.+++..                     .|||+++  |+|+||||+||+++.++. 
T Consensus        85 i~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~  163 (287)
T 4f0f_A           85 IVKLYGLMHNPP-RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDEN  163 (287)
T ss_dssp             BCCEEEEETTTT-EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTT
T ss_pred             chhhheeecCCC-eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCC
Confidence            999999875544 799999999999888743                     6999999  999999999999987765 


Q ss_pred             ----EEEeeccCcccccccccccCCCCCCCCcceeecccccc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy3166         136 ----VKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV--SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRI  209 (228)
Q Consensus       136 ----~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~--~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~  209 (228)
                          +||+|||++......      .....++..|+|||++.  ...++.++|+||+||++|+|++ |..||...+..+.
T Consensus       164 ~~~~~kl~Dfg~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~~  236 (287)
T 4f0f_A          164 APVCAKVADFGLSQQSVHS------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT-GEGPFDEYSYGKI  236 (287)
T ss_dssp             CSCCEEECCCTTCBCCSSC------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHH-SSCTTTTCCCCHH
T ss_pred             CceeEEeCCCCcccccccc------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHc-CCCCCccccccHH
Confidence                999999998743221      22356778899999984  4457889999999999999999 9999988655433


Q ss_pred             --HHH-HHcCCCCCCCCCCCC
Q psy3166         210 --VHY-LSTGYRMERPASCNE  227 (228)
Q Consensus       210 --~~~-~~~~~~~~~p~~~~~  227 (228)
                        ... ...+.++..|..+|+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~  257 (287)
T 4f0f_A          237 KFINMIREEGLRPTIPEDCPP  257 (287)
T ss_dssp             HHHHHHHHSCCCCCCCTTSCH
T ss_pred             HHHHHHhccCCCCCCCcccCH
Confidence              333 445666777887764


No 131
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=4.6e-37  Score=254.37  Aligned_cols=194  Identities=22%  Similarity=0.359  Sum_probs=161.6

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||.||+|+.         ..++..||+|.+...........+.+|+.+++++ +||||+++++++..
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~   96 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYD---------NLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRA   96 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECC
T ss_pred             ccEEEEEEeecCCCeEEEEEEE---------CCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEec
Confidence            6899999999999999999984         4455679999997665566667889999999999 99999999998854


Q ss_pred             C------ceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          90 D------ELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        90 ~------~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      .      ..+++||++. ++|.+++..                   .|||++||+||||||+||+++.++.+||+|||++
T Consensus        97 ~~~~~~~~~~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a  175 (364)
T 3qyz_A           97 PTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA  175 (364)
T ss_dssp             SSTTTCCCEEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             CCccccceEEEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcce
Confidence            2      3789999996 488887754                   6999999999999999999999999999999999


Q ss_pred             ccccccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      .................||..|+|||++.+ ..++.++|+||+||++|+|++ |..||.+.+..+.+..+..
T Consensus       176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~  246 (364)
T 3qyz_A          176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPIFPGKHYLDQLNHILG  246 (364)
T ss_dssp             EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHH-SSCSSCCSSGGGHHHHHHH
T ss_pred             EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHH-CCCCCCCCChHHHHHHHHH
Confidence            765443322222344578889999998764 458999999999999999999 9999999887777666543


No 132
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=1.5e-37  Score=249.36  Aligned_cols=190  Identities=26%  Similarity=0.431  Sum_probs=152.1

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH-HHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||.||+|+..          ++..||+|.+...... .....+.+|+++++++ +||||+++++++.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~----------~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~   70 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNN----------YGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIH   70 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET----------TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEcC----------CCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEc
Confidence            68999999999999999999852          3346999998654322 2235677999999999 9999999999987


Q ss_pred             cC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCccc
Q psy3166          89 KD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED  146 (228)
Q Consensus        89 ~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~  146 (228)
                      .. ..+++||++.+ +|.+++..                     .|||++||+||||||+||+++.++.+||+|||++..
T Consensus        71 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  149 (288)
T 1ob3_A           71 TKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARA  149 (288)
T ss_dssp             CSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHH
T ss_pred             cCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccc
Confidence            64 48899999975 88877653                     699999999999999999999999999999999875


Q ss_pred             ccccccccCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         147 IYEQNVFQNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      .....   .......+|..|+|||++.+. .++.++|+||+||++|+|++ |..||.+.+..+...++.+
T Consensus       150 ~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~~~~  215 (288)
T 1ob3_A          150 FGIPV---RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRIFR  215 (288)
T ss_dssp             HCC------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHH
T ss_pred             cCccc---cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHH
Confidence            43221   112234567889999998754 58999999999999999999 9999999887776665543


No 133
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=3.5e-37  Score=265.26  Aligned_cols=193  Identities=28%  Similarity=0.426  Sum_probs=159.3

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH------------HHHHHHHHHHHHHHhcCC
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA------------KTYDKFLKEINLMKDVGK   76 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~e~~~l~~l~~   76 (228)
                      .++|++.+.||+|+||+||+|..         ..++..||+|.++.....            .....+.+|+.+|+++ +
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~---------~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~  104 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKE---------KNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-D  104 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEE---------TTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-C
T ss_pred             ccceEEEeEecccCCeEEEEEEE---------CCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-C
Confidence            46899999999999999999984         344557999998754211            2345788999999999 9


Q ss_pred             CCceEEeeeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCC-
Q psy3166          77 HDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPH-  134 (228)
Q Consensus        77 h~ni~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~-  134 (228)
                      ||||+++++++.... +++||||+++|+|.+++..                    .|||+++|+||||||+||+++.++ 
T Consensus       105 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~  184 (504)
T 3q5i_A          105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS  184 (504)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTC
T ss_pred             CCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCC
Confidence            999999999987755 7899999999999988754                    699999999999999999998765 


Q ss_pred             --cEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy3166         135 --VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHY  212 (228)
Q Consensus       135 --~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~  212 (228)
                        .+||+|||++..+....    ......||+.|+|||++. ..++.++|+||+||++|+|++ |..||.+.+..++...
T Consensus       185 ~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~  258 (504)
T 3q5i_A          185 LLNIKIVDFGLSSFFSKDY----KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLC-GYPPFGGQNDQDIIKK  258 (504)
T ss_dssp             CSSEEECCCTTCEECCTTS----CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHH
T ss_pred             CccEEEEECCCCEEcCCCC----ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Confidence              69999999997554332    123456888999999876 458999999999999999999 9999999999999888


Q ss_pred             HHcCC
Q psy3166         213 LSTGY  217 (228)
Q Consensus       213 ~~~~~  217 (228)
                      +.++.
T Consensus       259 i~~~~  263 (504)
T 3q5i_A          259 VEKGK  263 (504)
T ss_dssp             HHHCC
T ss_pred             HHcCC
Confidence            88874


No 134
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1.4e-37  Score=254.23  Aligned_cols=186  Identities=19%  Similarity=0.299  Sum_probs=154.2

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      +-.++|++.+.||+|+||.||+|.         +..++..||+|.+......   ..+.+|+.+++++.+||||++++++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~---------~~~~~~~vavK~~~~~~~~---~~~~~E~~~l~~l~~h~~i~~~~~~   73 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGK---------NLYTNEYVAIKLEPMKSRA---PQLHLEYRFYKQLGSGDGIPQVYYF   73 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEE---------ETTTTEEEEEEEEETTCSS---CCHHHHHHHHHHHCSCTTSCCEEEE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEE---------ECCCCcEEEEEEeccccch---HHHHHHHHHHHHhhCCCCCCEEEEE
Confidence            345789999999999999999998         3445668999998654322   3467899999999899999999999


Q ss_pred             EEcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCc-----EEEe
Q psy3166          87 CYKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHV-----VKIS  139 (228)
Q Consensus        87 ~~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~-----~kl~  139 (228)
                      +..+. .++|||++ +++|.+++..                     .|||+++|+||||||+||+++.++.     +||+
T Consensus        74 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~  152 (330)
T 2izr_A           74 GPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHII  152 (330)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred             EecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEE
Confidence            87655 78999999 9999998763                     6999999999999999999998876     9999


Q ss_pred             eccCccccccccccc----CCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         140 DFGLSEDIYEQNVFQ----NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       140 dfg~~~~~~~~~~~~----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      |||++..+.......    .......||..|+|||++.+..++.++|+|||||++|+|++ |..||.+.+.
T Consensus       153 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~-g~~Pf~~~~~  222 (330)
T 2izr_A          153 DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLR-GSLPWQGLKA  222 (330)
T ss_dssp             CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTTTCCC
T ss_pred             EcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhc-CCCCcccccc
Confidence            999997654332111    11235678899999999999889999999999999999999 9999988543


No 135
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1.7e-37  Score=253.69  Aligned_cols=197  Identities=23%  Similarity=0.414  Sum_probs=150.9

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC-HHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD-AKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      +.+...++|++.+.||+|+||.||+|+         +..++..||+|.++.... ......+.+|+.+++++ +||||++
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~---------~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~   97 (329)
T 3gbz_A           28 PSATSIDRYRRITKLGEGTYGEVYKAI---------DTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIE   97 (329)
T ss_dssp             ----CGGGEEEEEEEEECSSSEEEEEE---------ETTTTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCC
T ss_pred             CcccchhhEEEEEEEEecCCeEEEEEE---------ECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcce
Confidence            445677899999999999999999997         444566899999975532 22345677899999999 9999999


Q ss_pred             eeeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeec-----CCCcE
Q psy3166          83 FIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLS-----SPHVV  136 (228)
Q Consensus        83 ~~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~-----~~~~~  136 (228)
                      +++++..+. .++||||+.+ +|.+++..                    .|||+++|+||||||+||+++     ..+.+
T Consensus        98 ~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~  176 (329)
T 3gbz_A           98 LKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVL  176 (329)
T ss_dssp             EEEEEEETTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEE
T ss_pred             EEEEEecCCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceE
Confidence            999987654 8899999975 99888764                    699999999999999999995     45569


Q ss_pred             EEeeccCcccccccccccCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         137 KISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       137 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      ||+|||++..+....   .......+|..|+|||++.+. .++.++|+|||||++|+|++ |..||.+.+..+....+..
T Consensus       177 kl~Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~~~~  252 (329)
T 3gbz_A          177 KIGDFGLARAFGIPI---RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTPLFPGDSEIDQLFKIFE  252 (329)
T ss_dssp             EECCTTHHHHHC--------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHH
T ss_pred             EECcCCCccccCCcc---cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHH-CCCCcCCCCHHHHHHHHHH
Confidence            999999987553221   112234567889999999864 48999999999999999999 9999999888777666544


No 136
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=1.2e-37  Score=255.97  Aligned_cols=190  Identities=26%  Similarity=0.445  Sum_probs=155.6

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||+||+|..         ..++..||+|.++....     ...+|++++.++.+||||+++++++..
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~   87 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIH---------KATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDD   87 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             ccEEEEEEEeeCCCEEEEEEEE---------CCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEc
Confidence            5799999999999999999984         44566899999975532     234688889888789999999999877


Q ss_pred             Cc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCC----CcEEEeeccCc
Q psy3166          90 DE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSP----HVVKISDFGLS  144 (228)
Q Consensus        90 ~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~----~~~kl~dfg~~  144 (228)
                      +. .++||||+.+|+|.+++..                    .|||++||+||||||+||++...    +.+||+|||++
T Consensus        88 ~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a  167 (342)
T 2qr7_A           88 GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA  167 (342)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence            55 7899999999999998754                    69999999999999999998542    35999999999


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC---CCHHHHHHHHHcCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPH---IPLCRIVHYLSTGY  217 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~---~~~~~~~~~~~~~~  217 (228)
                      ........   ......+|..|+|||++.+..++.++|+|||||++|+|++ |..||.+   .+..++...+..+.
T Consensus       168 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~~~~i~~~~  239 (342)
T 2qr7_A          168 KQLRAENG---LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT-GYTPFANGPDDTPEEILARIGSGK  239 (342)
T ss_dssp             EECBCTTC---CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCSSCSSTTSCHHHHHHHHHHCC
T ss_pred             ccCcCCCC---ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhc-CCCCCCCCCcCCHHHHHHHHccCC
Confidence            76543321   1234567888999999988778899999999999999999 9999986   34556777777763


No 137
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=2.4e-37  Score=256.08  Aligned_cols=188  Identities=16%  Similarity=0.208  Sum_probs=149.5

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcC--CCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG--KHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~--~h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||+||+|.+....    +..++..||+|.++...    ...+..|+++++++.  .|+||+.+
T Consensus        61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~----~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~l~~~~~~~iv~~  132 (365)
T 3e7e_A           61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLN----DAKNKQKFVLKVQKPAN----PWEFYIGTQLMERLKPSMQHMFMKF  132 (365)
T ss_dssp             ECSSSEEEEEEEEEECSSEEEEEEEC-----------CCCCEEEEEESSCC----HHHHHHHHHHHHHSCGGGGGGBCCE
T ss_pred             EECCEEEEEEEEeeccCCEEEEEEEecCCc----ccccCcEEEEEEeCCCC----hhHHHHHHHHHHHhhhhhhhhhhhh
Confidence            356688999999999999999999654322    34566679999987542    235667777777772  28999999


Q ss_pred             eeEEEc-CceEEEEecCCCCcHHHHHHH-------------------------hcccCCCCcccCCCCCCEeecC-----
Q psy3166          84 IGCCYK-DELRLVVEYCALGDLQSYLRE-------------------------EYLSNNKVVHRDLATRNILLSS-----  132 (228)
Q Consensus        84 ~~~~~~-~~~~lv~e~~~~~~L~~~l~~-------------------------~~lh~~~i~H~~lk~~nil~~~-----  132 (228)
                      ++++.. +..++||||+++|+|.+++..                         .|||+++|+||||||+|||++.     
T Consensus       133 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~  212 (365)
T 3e7e_A          133 YSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ  212 (365)
T ss_dssp             EEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC
T ss_pred             heeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCc
Confidence            998876 458999999999999999862                         5999999999999999999988     


Q ss_pred             ------CCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3166         133 ------PHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPH  203 (228)
Q Consensus       133 ------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~  203 (228)
                            ++.+||+|||++..+...... .......||..|+|||++.+..++.++|+|||||++|+|++ |..||..
T Consensus       213 ~~~~~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~  287 (365)
T 3e7e_A          213 DDEDDLSAGLALIDLGQSIDMKLFPKG-TIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF-GTYMKVK  287 (365)
T ss_dssp             ------CTTEEECCCTTCEEGGGSCTT-EEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHH-SSCCCEE
T ss_pred             cccccccCCEEEeeCchhhhhhccCCC-ceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHh-CCCcccc
Confidence                  899999999999754321111 11234568889999999998889999999999999999999 9988753


No 138
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=2.5e-37  Score=245.61  Aligned_cols=204  Identities=32%  Similarity=0.593  Sum_probs=159.0

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC---HHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD---AKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      .++.++|++.+.||+|+||.||+|.+.           +..||+|.++....   ....+.+.+|+.+++.+ +||||++
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-----------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~   70 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWI-----------GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIA   70 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEET-----------TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCC
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEc-----------CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEee
Confidence            567889999999999999999999853           34599999865422   22346788999999999 9999999


Q ss_pred             eeeEEEcCc-eEEEEecCCCCcHHHHHHH-------------------hcccCCC---CcccCCCCCCEeecC-------
Q psy3166          83 FIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------EYLSNNK---VVHRDLATRNILLSS-------  132 (228)
Q Consensus        83 ~~~~~~~~~-~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~---i~H~~lk~~nil~~~-------  132 (228)
                      +++++..+. .+++|||+++++|.+++..                   .|||+++   |+|+||||+||+++.       
T Consensus        71 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~  150 (271)
T 3dtc_A           71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDL  150 (271)
T ss_dssp             EEEEECCC--CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCC
T ss_pred             EEEEEecCCceEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccc
Confidence            999987654 8899999999999988743                   6999999   889999999999986       


Q ss_pred             -CCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy3166         133 -PHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVH  211 (228)
Q Consensus       133 -~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~  211 (228)
                       ++.++|+|||++.......     .....++..|+|||.+.+..++.++|+||+|+++|+|++ |..||.+.+..+...
T Consensus       151 ~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~  224 (271)
T 3dtc_A          151 SNKILKITDFGLAREWHRTT-----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGIDGLAVAY  224 (271)
T ss_dssp             SSCCEEECCCCC------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH-CCCTTTTSCHHHHHH
T ss_pred             cCcceEEccCCccccccccc-----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Confidence             6789999999987543322     123467888999999998889999999999999999999 999999988877766


Q ss_pred             HHHc-CCCCCCCCCCCC
Q psy3166         212 YLST-GYRMERPASCNE  227 (228)
Q Consensus       212 ~~~~-~~~~~~p~~~~~  227 (228)
                      .+.. ..+.+.|..+|+
T Consensus       225 ~~~~~~~~~~~~~~~~~  241 (271)
T 3dtc_A          225 GVAMNKLALPIPSTCPE  241 (271)
T ss_dssp             HHHTSCCCCCCCTTCCH
T ss_pred             hhhcCCCCCCCCcccCH
Confidence            5444 445567777764


No 139
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=8.6e-38  Score=251.83  Aligned_cols=207  Identities=29%  Similarity=0.436  Sum_probs=144.7

Q ss_pred             CccCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceE
Q psy3166           2 ALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIV   81 (228)
Q Consensus         2 ~~~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~   81 (228)
                      .++|.+..++|++.+.||+|+||.||+|.         +..++..||+|.+...........+.+|+.+++++ +||||+
T Consensus         7 ~~p~~i~~~~y~~~~~lg~G~~g~V~~~~---------~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~   76 (303)
T 2vwi_A            7 ALPWSINRDDYELQEVIGSGATAVVQAAY---------CAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIV   76 (303)
T ss_dssp             ------CCCCCEEEEECC---CCCEEEEE---------C----CEEEEECCC----------------CCCCC-CCTTBC
T ss_pred             ccccccchhhhhhhheeccccceEEEEEE---------ECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEe
Confidence            46788999999999999999999999997         33455679999987554344456778999999999 999999


Q ss_pred             EeeeEEEcC-ceEEEEecCCCCcHHHHHHH----------------------------hcccCCCCcccCCCCCCEeecC
Q psy3166          82 SFIGCCYKD-ELRLVVEYCALGDLQSYLRE----------------------------EYLSNNKVVHRDLATRNILLSS  132 (228)
Q Consensus        82 ~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~----------------------------~~lh~~~i~H~~lk~~nil~~~  132 (228)
                      ++++++... ..+++||++++++|.+++..                            .|||+++++|+||||+||+++.
T Consensus        77 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~  156 (303)
T 2vwi_A           77 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE  156 (303)
T ss_dssp             CEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT
T ss_pred             eEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcC
Confidence            999998764 58899999999999998752                            5899999999999999999999


Q ss_pred             CCcEEEeeccCcccccccccc--cCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy3166         133 PHVVKISDFGLSEDIYEQNVF--QNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRI  209 (228)
Q Consensus       133 ~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~  209 (228)
                      ++.++|+|||++.........  ........++..|+|||.+.. ..++.++|+||||+++|+|++ |..||...+..+.
T Consensus       157 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~  235 (303)
T 2vwi_A          157 DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT-GAAPYHKYPPMKV  235 (303)
T ss_dssp             TCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHH-SSCTTTTSCGGGH
T ss_pred             CCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHh-CCCCCccCchhhH
Confidence            999999999988654332111  111223467788999999875 468899999999999999999 9999999877766


Q ss_pred             HHHHHcCCCC
Q psy3166         210 VHYLSTGYRM  219 (228)
Q Consensus       210 ~~~~~~~~~~  219 (228)
                      .........+
T Consensus       236 ~~~~~~~~~~  245 (303)
T 2vwi_A          236 LMLTLQNDPP  245 (303)
T ss_dssp             HHHHHTSSCC
T ss_pred             HHHHhccCCC
Confidence            5555554343


No 140
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=6e-37  Score=249.51  Aligned_cols=192  Identities=23%  Similarity=0.407  Sum_probs=162.4

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH-----HHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-----KTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      ++|++.+.||+|+||.||+|+..         .++..||+|.++.....     .....+.+|+.+++++ +||||++++
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~   81 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREK---------STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLH   81 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEEC---------CCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEE
Confidence            57999999999999999999843         44557999998654221     1346788999999999 899999999


Q ss_pred             eEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCC----cEEEe
Q psy3166          85 GCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPH----VVKIS  139 (228)
Q Consensus        85 ~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~----~~kl~  139 (228)
                      +++.... .+++||++++++|.+++..                    .|||+++|+|+||||+||+++.++    .++|+
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~  161 (321)
T 2a2a_A           82 DVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLI  161 (321)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred             EEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEc
Confidence            9987654 8899999999999998864                    699999999999999999999877    79999


Q ss_pred             eccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       140 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      |||++........    .....++..|+|||.+.+..++.++|+||||+++|+|++ |..||.+.+..+....+..+
T Consensus       162 Dfg~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~i~~~  233 (321)
T 2a2a_A          162 DFGLAHEIEDGVE----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANITSV  233 (321)
T ss_dssp             CCTTCEECCTTCC----CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SCCSSCCSSHHHHHHHHHTT
T ss_pred             cCccceecCcccc----ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhc
Confidence            9999875543221    223567889999999998889999999999999999999 99999998888887777765


No 141
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=3.4e-37  Score=245.65  Aligned_cols=192  Identities=23%  Similarity=0.393  Sum_probs=160.7

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .++|++.+.||+|+||.||+|....         ++..+|+|.+..... .....+.+|+++++++ +||||+++++++.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~---------~~~~~a~k~~~~~~~-~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~   76 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKG---------TRIRRAAKKIPKYFV-EDVDRFKQEIEIMKSL-DHPNIIRLYETFE   76 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETT---------TCCEEEEEEEEGGGC-SCHHHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCC---------CCcEEEEEeehhhcc-chHHHHHHHHHHHHhC-CCCCEeeEEEEEe
Confidence            3679999999999999999998543         445699999865422 2246788999999999 9999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEee---cCCCcEEEeeccCc
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILL---SSPHVVKISDFGLS  144 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~---~~~~~~kl~dfg~~  144 (228)
                      .+. .++||||+++++|.+++..                    .|||+++|+|+||||+||++   +.++.++|+|||++
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~  156 (277)
T 3f3z_A           77 DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA  156 (277)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             cCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence            755 7899999999999888754                    69999999999999999999   77889999999998


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY  217 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~  217 (228)
                      ..+....    ......++..|+|||.+.+. ++.++|+||+|+++|+|++ |..||...+..+....+.++.
T Consensus       157 ~~~~~~~----~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~  223 (277)
T 3f3z_A          157 ARFKPGK----MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLC-GYPPFSAPTDSEVMLKIREGT  223 (277)
T ss_dssp             EECCTTS----CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCC
T ss_pred             eeccCcc----chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhCC
Confidence            7554332    12235678889999988654 8899999999999999999 999999998888888877763


No 142
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=4.8e-37  Score=254.95  Aligned_cols=197  Identities=22%  Similarity=0.308  Sum_probs=154.9

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++.+.||+|+||.||+|..         ..++..||+|.+.... .......+.+|+.+++.+ +||||+++++++
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~   93 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYD---------AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVF   93 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             hhheeEeeeeEecCCEEEEEEEE---------CCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEee
Confidence            36899999999999999999984         4455679999987542 344556788999999999 999999999998


Q ss_pred             EcC-------ceEEEEecCCCCcHHHHHHH------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          88 YKD-------ELRLVVEYCALGDLQSYLRE------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        88 ~~~-------~~~lv~e~~~~~~L~~~l~~------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ...       ..++|||++.+ +|.+++..                  .|||++||+||||||+||+++.++.+||+|||
T Consensus        94 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  172 (371)
T 2xrw_A           94 TPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG  172 (371)
T ss_dssp             CSCCSTTTCCEEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             ccccccccccceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEee
Confidence            653       47899999965 67776542                  69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      ++.......    ......+|..|+|||++.+..++.++|+||+||++|+|++ |..||.+.+..+....+.+....+.
T Consensus       173 ~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~~~  246 (371)
T 2xrw_A          173 LARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQWNKVIEQLGTPC  246 (371)
T ss_dssp             C--------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHC-CCCCC
T ss_pred             ccccccccc----ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            987543321    1223567788999999998889999999999999999999 9999999888877777766544443


No 143
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=1e-36  Score=251.70  Aligned_cols=189  Identities=23%  Similarity=0.290  Sum_probs=159.1

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcC----CCCceEEee
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG----KHDHIVSFI   84 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~----~h~ni~~~~   84 (228)
                      .++|++.+.||+|+||.||+|+..         .++..||+|.++..  .........|+.+++.+.    .||||++++
T Consensus        34 ~~~y~~~~~lG~G~~g~V~~~~~~---------~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~  102 (360)
T 3llt_A           34 NNAFLVIRKMGDGTFGRVLLCQHI---------DNKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNIVKYH  102 (360)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred             cCEEEEEEEEcccCCeEEEEEEEC---------CCCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence            478999999999999999999853         34557999998643  344456778999999984    399999999


Q ss_pred             eEEEcC-ceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecC---------
Q psy3166          85 GCCYKD-ELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSS---------  132 (228)
Q Consensus        85 ~~~~~~-~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~---------  132 (228)
                      +++... ..++|||++ +++|.+++..                      .|||+++|+||||||+|||++.         
T Consensus       103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~  181 (360)
T 3llt_A          103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLIT  181 (360)
T ss_dssp             EEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEE
T ss_pred             ceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccc
Confidence            988764 488999999 8899998764                      6999999999999999999975         


Q ss_pred             ----------------CCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhC
Q psy3166         133 ----------------PHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTL  196 (228)
Q Consensus       133 ----------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~  196 (228)
                                      ++.+||+|||++......      .....||..|+|||++.+..++.++|+|||||++|+|++ 
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-  254 (360)
T 3llt_A          182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY------HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT-  254 (360)
T ss_dssp             EECTTTCCEEEEEEESCCCEEECCCTTCEETTSC------CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-
T ss_pred             hhcccccccccccccCCCCEEEEeccCceecCCC------CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH-
Confidence                            788999999998743221      234567889999999999899999999999999999999 


Q ss_pred             CCCCCCCCCHHHHHHHHHcC
Q psy3166         197 GANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       197 g~~pf~~~~~~~~~~~~~~~  216 (228)
                      |..||.+.+..+....+...
T Consensus       255 g~~pf~~~~~~~~~~~~~~~  274 (360)
T 3llt_A          255 GSLLFRTHEHMEHLAMMESI  274 (360)
T ss_dssp             SSCSCCCSSHHHHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHHHHh
Confidence            99999998888877776654


No 144
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=4.8e-37  Score=255.19  Aligned_cols=190  Identities=23%  Similarity=0.378  Sum_probs=153.7

Q ss_pred             ceee--eeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          11 RLIL--GEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        11 ~~~~--~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .|.+  .+.||+|+||.||+|..         ..++..||+|.++... ....+.+.+|+++++++ +||||+++++++.
T Consensus        88 ~~~~~~~~~lG~G~~g~Vy~a~~---------~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~  156 (373)
T 2x4f_A           88 FYTVSKTEILGGGRFGQVHKCEE---------TATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQL-DHANLIQLYDAFE  156 (373)
T ss_dssp             TEEEEEEEECC-----CEEEEEE---------TTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEE
T ss_pred             ceeeecceEEecCcCEEEEEEEE---------cCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhC-CCCCCCeEEEEEE
Confidence            3444  67899999999999984         3345579999987542 34456788999999999 9999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEee--cCCCcEEEeeccCc
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILL--SSPHVVKISDFGLS  144 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~--~~~~~~kl~dfg~~  144 (228)
                      ... .++||||+++++|.+++..                     .|||+++|+||||||+|||+  +.++.+||+|||++
T Consensus       157 ~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a  236 (373)
T 2x4f_A          157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLA  236 (373)
T ss_dssp             CSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSC
T ss_pred             ECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCc
Confidence            654 8899999999999887753                     69999999999999999999  45679999999998


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      ..+.....    .....||..|+|||++....++.++|+|||||++|+|++ |..||.+.+..+....+..+
T Consensus       237 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~i~~~  303 (373)
T 2x4f_A          237 RRYKPREK----LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS-GLSPFLGDNDAETLNNILAC  303 (373)
T ss_dssp             EECCTTCB----CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHT
T ss_pred             eecCCccc----cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhc
Confidence            76543321    223467889999999988889999999999999999999 99999999888887777665


No 145
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=8.5e-37  Score=247.41  Aligned_cols=209  Identities=20%  Similarity=0.257  Sum_probs=156.1

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      +...++|++.+.||+|+||.||+|..         ..++..||+|.++...  .......+.+|+.+++++ +||||+++
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~   99 (309)
T 2h34_A           30 GTQFGPYRLRRLVGRGGMGDVYEAED---------TVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPI   99 (309)
T ss_dssp             ----CCEEEEEEEEECSSSEEEEEEE---------TTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCE
T ss_pred             CcEeccEEEEEEEcCCCCeeEEEEEE---------cCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEE
Confidence            56678999999999999999999984         3455679999987542  344457788999999999 99999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++..+. .+++||++++++|.+++..                    .|||+++|+|+||||+||+++.++.++|+|||
T Consensus       100 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg  179 (309)
T 2h34_A          100 HDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFG  179 (309)
T ss_dssp             EEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCC
T ss_pred             EEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCc
Confidence            99987644 7899999999999998764                    69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--C
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRM--E  220 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~--~  220 (228)
                      ++........  .......++..|+|||.+.+..++.++|+||||+++|+|++ |..||.+.....+...+......  .
T Consensus       180 ~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (309)
T 2h34_A          180 IASATTDEKL--TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLT-GSPPYQGDQLSVMGAHINQAIPRPST  256 (309)
T ss_dssp             C------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHH-SSCSSCSCHHHHHHHHHHSCCCCGGG
T ss_pred             cCcccccccc--ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHH-CCCCCCCchHHHHHHHhccCCCCccc
Confidence            9865433221  11223467888999999988889999999999999999999 99999987666555555544332  2


Q ss_pred             CCCCCCC
Q psy3166         221 RPASCNE  227 (228)
Q Consensus       221 ~p~~~~~  227 (228)
                      .+.++|+
T Consensus       257 ~~~~~~~  263 (309)
T 2h34_A          257 VRPGIPV  263 (309)
T ss_dssp             TSTTCCT
T ss_pred             cCCCCCH
Confidence            3455554


No 146
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=9.2e-37  Score=251.29  Aligned_cols=198  Identities=25%  Similarity=0.450  Sum_probs=161.2

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      ++|++.+.||+|+||.||+|+.         ..++..||+|.+....  .....+.+.+|+.+++++ +||||+++++++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~  123 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARD---------VRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCY  123 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEE---------ccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence            5699999999999999999983         4455679999987542  233456788999999999 999999999998


Q ss_pred             EcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166          88 YKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus        88 ~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      ..+. .++||||+. |++.+++..                     .|||+++|+||||||+||+++.++.+||+|||++.
T Consensus       124 ~~~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  202 (348)
T 1u5q_A          124 LREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS  202 (348)
T ss_dssp             EETTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred             EECCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCce
Confidence            7654 789999997 577776642                     69999999999999999999999999999999987


Q ss_pred             cccccccccCCCCCCCCcceeecccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-
Q psy3166         146 DIYEQNVFQNGEPSEKLPIRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER-  221 (228)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~-  221 (228)
                      ....       .....||..|+|||++.   ...++.++|+|||||++|+|++ |..||...+..+....+..+..+.. 
T Consensus       203 ~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~  274 (348)
T 1u5q_A          203 IMAP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNESPALQ  274 (348)
T ss_dssp             SSSS-------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSCCCCCC
T ss_pred             ecCC-------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCC
Confidence            5432       12356788999999985   4568899999999999999999 9999999888777666666555443 


Q ss_pred             CCCCC
Q psy3166         222 PASCN  226 (228)
Q Consensus       222 p~~~~  226 (228)
                      +..+|
T Consensus       275 ~~~~~  279 (348)
T 1u5q_A          275 SGHWS  279 (348)
T ss_dssp             CTTSC
T ss_pred             CCCCC
Confidence            33443


No 147
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=4.3e-37  Score=253.32  Aligned_cols=191  Identities=24%  Similarity=0.327  Sum_probs=145.0

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||.||+|+..         .+++.||+|.++...   ..+.+.+|+.+++++ +||||+++++++..
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~---------~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~h~niv~~~~~~~~  119 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQK---------GTQKPYALKVLKKTV---DKKIVRTEIGVLLRL-SHPNIIKLKEIFET  119 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEEEC-------------CHHHHHC-CCTTBCCEEEEEEC
T ss_pred             CcEEEeeEEeeCCCEEEEEEEEC---------CCCcEEEEEEeccch---hHHHHHHHHHHHHhC-CCCCCcceeeeEec
Confidence            56999999999999999999854         344579999987543   234577899999999 99999999999876


Q ss_pred             Cc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecC---CCcEEEeeccCcc
Q psy3166          90 DE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSS---PHVVKISDFGLSE  145 (228)
Q Consensus        90 ~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~---~~~~kl~dfg~~~  145 (228)
                      .. .+++|||+++++|.+++..                    .|||+++|+||||||+||+++.   ++.+||+|||++.
T Consensus       120 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~  199 (349)
T 2w4o_A          120 PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK  199 (349)
T ss_dssp             SSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence            54 7899999999999998753                    6999999999999999999975   7899999999987


Q ss_pred             cccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCC
Q psy3166         146 DIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCR-IVHYLSTGYR  218 (228)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~-~~~~~~~~~~  218 (228)
                      ......    ......||..|+|||++.+..++.++|+|||||++|+|++ |..||......+ +...+.++..
T Consensus       200 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~~i~~~~~  268 (349)
T 2w4o_A          200 IVEHQV----LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC-GFEPFYDERGDQFMFRRILNCEY  268 (349)
T ss_dssp             -----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCCTTCHHHHHHHHHTTCC
T ss_pred             ccCccc----ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHh-CCCCCCCCcccHHHHHHHHhCCC
Confidence            543321    1223567889999999998889999999999999999999 999998766554 5666666533


No 148
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=7.8e-37  Score=244.89  Aligned_cols=191  Identities=26%  Similarity=0.416  Sum_probs=155.2

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||.||+|...         .++..+|+|.+...........+.+|+++++++ +||||+++++++..
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~   91 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEER---------SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFED   91 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEET---------TTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC
T ss_pred             hheeecceeccCCCeEEEEEEEc---------cCCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheec
Confidence            67999999999999999999843         345579999987654333456788999999999 99999999999876


Q ss_pred             Cc-eEEEEecCCCCcHHHHHHH------------------------hcccCCCCcccCCCCCCEeec---CCCcEEEeec
Q psy3166          90 DE-LRLVVEYCALGDLQSYLRE------------------------EYLSNNKVVHRDLATRNILLS---SPHVVKISDF  141 (228)
Q Consensus        90 ~~-~~lv~e~~~~~~L~~~l~~------------------------~~lh~~~i~H~~lk~~nil~~---~~~~~kl~df  141 (228)
                      .. .++|||++++++|.+++..                        .|||+++|+|+||||+||+++   .++.+||+||
T Consensus        92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Df  171 (285)
T 3is5_A           92 YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDF  171 (285)
T ss_dssp             SSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred             CCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEee
Confidence            44 7899999999999988742                        599999999999999999994   4678999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      |++..+.....    .....++..|+|||.+. ..++.++|+||+|+++|+|++ |..||.+.+..++.......
T Consensus       172 g~a~~~~~~~~----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~-g~~pf~~~~~~~~~~~~~~~  240 (285)
T 3is5_A          172 GLAELFKSDEH----STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLT-GCLPFTGTSLEEVQQKATYK  240 (285)
T ss_dssp             CCCCC--------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC
T ss_pred             ecceecCCccc----CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHh-CCCCCCCCCHHHHHhhhccC
Confidence            99875433221    22356788899999875 458899999999999999999 99999998888777666554


No 149
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=4.2e-37  Score=263.69  Aligned_cols=193  Identities=31%  Similarity=0.460  Sum_probs=159.8

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++.+.||+|+||+||+|+.         ..++..||+|.+.... .......+.+|+.+|+++ +||||+++++++
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~   90 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKD---------RITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEIL   90 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEE---------TTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEE---------CCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEE
Confidence            36899999999999999999984         3445679999985331 112246788999999999 999999999998


Q ss_pred             EcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecC---CCcEEEeeccC
Q psy3166          88 YKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSS---PHVVKISDFGL  143 (228)
Q Consensus        88 ~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~---~~~~kl~dfg~  143 (228)
                      .... +++||||+.+++|.+++..                    .|||++||+||||||+||+++.   ++.+||+|||+
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~  170 (486)
T 3mwu_A           91 EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL  170 (486)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSC
T ss_pred             EcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCc
Confidence            7754 7899999999999888754                    6999999999999999999954   56799999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY  217 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~  217 (228)
                      +..+....    ......||+.|+|||++.+ .++.++|+||+||++|+|++ |..||.+.+..++...+..+.
T Consensus       171 a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~  238 (486)
T 3mwu_A          171 STCFQQNT----KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVETGK  238 (486)
T ss_dssp             TTTBCCC--------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTC
T ss_pred             CeECCCCC----ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCC
Confidence            87554332    1234568899999999875 48999999999999999999 999999999888888887764


No 150
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=2.9e-37  Score=249.86  Aligned_cols=195  Identities=25%  Similarity=0.379  Sum_probs=154.3

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC----HHHHHHHHHHHHHHHhcC--CCCce
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD----AKTYDKFLKEINLMKDVG--KHDHI   80 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~--~h~ni   80 (228)
                      +-.++|++.+.||+|+||+||+|+         +..+++.||+|.++....    ........+|+.+++++.  +||||
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~---------~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni   76 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV   76 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEE---------CTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTB
T ss_pred             ccccceEEEEEEecCCCeEEEEEE---------ECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCe
Confidence            445799999999999999999998         445566899999863321    111234556777777662  59999


Q ss_pred             EEeeeEEEcCc------eEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecC
Q psy3166          81 VSFIGCCYKDE------LRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSS  132 (228)
Q Consensus        81 ~~~~~~~~~~~------~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~  132 (228)
                      +++++++....      .+++||++. ++|.+++..                      .|||+++|+||||||+||+++.
T Consensus        77 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~  155 (308)
T 3g33_A           77 VRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS  155 (308)
T ss_dssp             CCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECT
T ss_pred             EEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC
Confidence            99999986532      689999996 599888654                      6999999999999999999999


Q ss_pred             CCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy3166         133 PHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHY  212 (228)
Q Consensus       133 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~  212 (228)
                      ++.+||+|||++.......    ......+|..|+|||++.+..++.++|+||+||++|+|++ |..||.+.+..+...+
T Consensus       156 ~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~  230 (308)
T 3g33_A          156 GGTVKLADFGLARIYSYQM----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGK  230 (308)
T ss_dssp             TSCEEECSCSCTTTSTTCC----CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTT-SSCSCCCSSHHHHHHH
T ss_pred             CCCEEEeeCccccccCCCc----ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Confidence            9999999999987543321    1223466888999999998889999999999999999999 9999999888887776


Q ss_pred             HHcC
Q psy3166         213 LSTG  216 (228)
Q Consensus       213 ~~~~  216 (228)
                      +.+.
T Consensus       231 i~~~  234 (308)
T 3g33_A          231 IFDL  234 (308)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6543


No 151
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=3.8e-37  Score=257.95  Aligned_cols=178  Identities=26%  Similarity=0.421  Sum_probs=143.2

Q ss_pred             CCceeee-eeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILG-EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~-~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|.+. +.||+|+||+||+|+.         ..++..||+|.++..      ..+.+|+.++.++.+||||+++++++
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~---------~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~  124 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFN---------KRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVY  124 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEE---------TTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEE---------CCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEE
Confidence            3567776 7999999999999984         445567999998633      34567888887776999999999987


Q ss_pred             Ec-----CceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecC---CCcEE
Q psy3166          88 YK-----DELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSS---PHVVK  137 (228)
Q Consensus        88 ~~-----~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~---~~~~k  137 (228)
                      ..     ..+++||||+.+|+|.+++..                      .|||+++|+||||||+|||++.   ++.+|
T Consensus       125 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~k  204 (400)
T 1nxk_A          125 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK  204 (400)
T ss_dssp             EEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEE
T ss_pred             eecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEE
Confidence            53     337899999999999998753                      6999999999999999999997   78999


Q ss_pred             EeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         138 ISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       138 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      |+|||+++......    ......||..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus       205 l~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~  268 (400)
T 1nxk_A          205 LTDFGFAKETTSHN----SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-GYPPFYSNHG  268 (400)
T ss_dssp             ECCCTTCEECC---------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHH-SSCSCCCCTT
T ss_pred             EEecccccccCCCC----ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHh-CCCCCCCCcc
Confidence            99999987543321    1224567888999999988889999999999999999999 9999987654


No 152
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.3e-37  Score=254.96  Aligned_cols=189  Identities=22%  Similarity=0.393  Sum_probs=152.6

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++.+.||+|+||.||+|..         ..++..||+|.+... .......++.+|+.+|+++ +||||+++++++
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~   93 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVD---------GRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVF   93 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEE---------TTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEE
T ss_pred             cceEEEeEEeeecCCeEEEEEEE---------CCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeE
Confidence            46899999999999999999984         445567999998654 3344556788999999999 899999999998


Q ss_pred             EcC-------ceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          88 YKD-------ELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        88 ~~~-------~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ...       .++++||++ +++|.+++..                   .|||++||+||||||+||+++.++.+||+||
T Consensus        94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  172 (367)
T 1cm8_A           94 TPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDF  172 (367)
T ss_dssp             CSCSSTTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             ecCCccccCceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEee
Confidence            653       358999999 7899888764                   6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      |++......      .....+|..|+|||++.+ ..++.++|+||+||++|+|++ |..||.+.+..+.+..+.+
T Consensus       173 g~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~l~~i~~  240 (367)
T 1cm8_A          173 GLARQADSE------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT-GKTLFKGSDHLDQLKEIMK  240 (367)
T ss_dssp             TTCEECCSS------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHH
T ss_pred             ecccccccc------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHH
Confidence            998754221      223567888999999886 678999999999999999999 9999999887766665543


No 153
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=6.2e-37  Score=251.41  Aligned_cols=196  Identities=30%  Similarity=0.506  Sum_probs=157.5

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC----CHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA----DAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      ++|++.+.||+|+||.||+|..         ..++..||+|.+....    .......+.+|+.+++++ +||||+++++
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~   95 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIE---------NQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYE   95 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEE---------TTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             hheeecceeeecCCeEEEEEEE---------CCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeeh
Confidence            5799999999999999999984         3445579999986431    233456788999999999 8999999999


Q ss_pred             EEEcCc-eEEEEecCCCCcHHHHHH----------------------------------------------H--------
Q psy3166          86 CCYKDE-LRLVVEYCALGDLQSYLR----------------------------------------------E--------  110 (228)
Q Consensus        86 ~~~~~~-~~lv~e~~~~~~L~~~l~----------------------------------------------~--------  110 (228)
                      ++.... .++||||+++++|.+++.                                              +        
T Consensus        96 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  175 (345)
T 3hko_A           96 VYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR  175 (345)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred             hhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence            987755 789999999999988762                                              0        


Q ss_pred             ------hcccCCCCcccCCCCCCEeecCCC--cEEEeeccCccccccccc-ccCCCCCCCCcceeeccccccc--CCCCc
Q psy3166         111 ------EYLSNNKVVHRDLATRNILLSSPH--VVKISDFGLSEDIYEQNV-FQNGEPSEKLPIRWLALESLVS--NIYTN  179 (228)
Q Consensus       111 ------~~lh~~~i~H~~lk~~nil~~~~~--~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~~Pe~~~~--~~~~~  179 (228)
                            .|||+++|+|+||||+||+++.++  .+||+|||++..+..... .........++..|+|||.+.+  ..++.
T Consensus       176 qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  255 (345)
T 3hko_A          176 QIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP  255 (345)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred             HHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence                  699999999999999999998766  899999999875533211 1112234567889999999875  56889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         180 KSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       180 ~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      ++|+|||||++|+|++ |..||.+.+..+...++..+
T Consensus       256 ~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~  291 (345)
T 3hko_A          256 KCDAWSAGVLLHLLLM-GAVPFPGVNDADTISQVLNK  291 (345)
T ss_dssp             HHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHH-CCCCCCCCChHHHHHHHHhc
Confidence            9999999999999999 99999998888887776655


No 154
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=5.6e-37  Score=263.43  Aligned_cols=193  Identities=28%  Similarity=0.431  Sum_probs=156.9

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||+||+|+.         ..++..||+|.+.... .......+.+|+.+++++ +||||+++++++.
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~  106 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRD---------KVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFE  106 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEE---------TTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEE---------CCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEE
Confidence            3699999999999999999984         3445579999987542 122345678999999999 9999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecC---CCcEEEeeccCc
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSS---PHVVKISDFGLS  144 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~---~~~~kl~dfg~~  144 (228)
                      ... .++||||+++|+|.+++..                    .|||++||+||||||+||+++.   ++.+||+|||++
T Consensus       107 ~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a  186 (494)
T 3lij_A          107 DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS  186 (494)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence            754 7899999999999887654                    6999999999999999999976   456999999998


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYR  218 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~  218 (228)
                      ..+....    ......||+.|+|||++. ..++.++|+||+||++|+|++ |..||.+.+..++...+..+..
T Consensus       187 ~~~~~~~----~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~  254 (494)
T 3lij_A          187 AVFENQK----KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLA-GYPPFGGQTDQEILRKVEKGKY  254 (494)
T ss_dssp             EECBTTB----CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTCC
T ss_pred             eECCCCc----cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCC
Confidence            7654332    123456888999999876 458999999999999999999 9999999999999888887643


No 155
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-37  Score=257.31  Aligned_cols=210  Identities=25%  Similarity=0.337  Sum_probs=161.4

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC---CHHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA---DAKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      +..++|++.+.||+|+||.||+|+...      ...++..||+|.++...   .......+.+|+++++++.+||||+++
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~------~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~  124 (355)
T 1vzo_A           51 VGIENFELLKVLGTGAYGKVFLVRKIS------GHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL  124 (355)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECS------STTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCE
T ss_pred             ccccceEEEEEeccCCCEEEEEEEEcc------cCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEE
Confidence            455799999999999999999998633      23456689999986431   111224456799999999779999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++... ..++||||+++++|.+++..                    .|||+++|+||||||+|||++.++.+||+|||
T Consensus       125 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG  204 (355)
T 1vzo_A          125 HYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG  204 (355)
T ss_dssp             EEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred             EEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCC
Confidence            9988765 48899999999999998764                    69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHHcC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN--IYTNKSDVWSFGVVLWEIVTLGANPYPHIP----LCRIVHYLSTG  216 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--~~~~~~Diwslg~~~~~l~t~g~~pf~~~~----~~~~~~~~~~~  216 (228)
                      +++.+......  ......||..|+|||++.+.  .++.++|+|||||++|+|++ |..||....    ..++...+...
T Consensus       205 ~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~-g~~pf~~~~~~~~~~~~~~~~~~~  281 (355)
T 1vzo_A          205 LSKEFVADETE--RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT-GASPFTVDGEKNSQAEISRRILKS  281 (355)
T ss_dssp             EEEECCGGGGG--GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHH-SSCTTSCTTSCCCHHHHHHHHHHC
T ss_pred             CCeecccCCCC--cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHH-CCCCCccCCccchHHHHHHHHhcc
Confidence            98754332211  11234678889999999853  47889999999999999999 999997532    23444444444


Q ss_pred             CCCCCCCCCC
Q psy3166         217 YRMERPASCN  226 (228)
Q Consensus       217 ~~~~~p~~~~  226 (228)
                       .++.|..++
T Consensus       282 -~~~~~~~~~  290 (355)
T 1vzo_A          282 -EPPYPQEMS  290 (355)
T ss_dssp             -CCCCCTTSC
T ss_pred             -CCCCCcccC
Confidence             555565554


No 156
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=6.3e-37  Score=253.00  Aligned_cols=190  Identities=26%  Similarity=0.431  Sum_probs=161.7

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      .+..++|++.+.||+|+||.||+|...         .++..||+|.++..........+.+|+.+++++ +||||+++++
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~   98 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVSHK---------PSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYG   98 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEET---------TTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEE
T ss_pred             ccccccceeeeeecCCCCeEEEEEEEC---------CCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeE
Confidence            356789999999999999999999853         345579999998766666677889999999999 9999999999


Q ss_pred             EEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCC-CCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          86 CCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNN-KVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        86 ~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~-~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      ++..+. .++||||+++++|.+++..                    .|||++ +|+|+||||+||+++.++.++|+|||+
T Consensus        99 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  178 (360)
T 3eqc_A           99 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV  178 (360)
T ss_dssp             EEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCC
T ss_pred             EEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCC
Confidence            987654 7899999999999998764                    589986 999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVH  211 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~  211 (228)
                      +..+....     .....++..|+|||++.+..++.++|+|||||++|+|++ |..||...+..++..
T Consensus       179 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~  240 (360)
T 3eqc_A          179 SGQLIDSM-----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV-GRYPIPPPDAKELEL  240 (360)
T ss_dssp             CHHHHHHC---------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHH-TSCCSSCCCHHHHHH
T ss_pred             Cccccccc-----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Confidence            86543321     223467788999999998889999999999999999999 999999987766543


No 157
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=4e-37  Score=251.05  Aligned_cols=214  Identities=36%  Similarity=0.637  Sum_probs=171.4

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      .+..++|++.+.||+|+||.||+|++...     +..++..||+|.+.... ....+.+.+|+.+++++ +||||+++++
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~  109 (326)
T 2w1i_A           37 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-----QDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSL-QHDNIVKYKG  109 (326)
T ss_dssp             CCCGGGEEEEEEEECCSSEEEEEEEECTT-----SSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             ccCHHHceeeeeeccCCCeEEEEEEeccc-----cCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhC-CCCCeeeEEE
Confidence            46677899999999999999999985321     33466789999987653 34456788999999999 9999999999


Q ss_pred             EEEcC---ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          86 CCYKD---ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        86 ~~~~~---~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++...   ..++|||++++++|.+++..                     .|||+++|+|+||||+||+++.++.+||+||
T Consensus       110 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Df  189 (326)
T 2w1i_A          110 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF  189 (326)
T ss_dssp             EECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCC
T ss_pred             EEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecC
Confidence            87543   47899999999999998764                     5899999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---------------
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL---------------  206 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~---------------  206 (228)
                      |++.................++..|+|||.+.+..++.++|+||||+++|+|++ |..||.....               
T Consensus       190 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~  268 (326)
T 2w1i_A          190 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPPAEFMRMIGNDKQGQMI  268 (326)
T ss_dssp             TTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHH-TTCGGGSHHHHHHHHHCTTCCTHHH
T ss_pred             cchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHh-cCCCCCCCHHHHHHhhccccchhhh
Confidence            998765443322222233456677999999988888999999999999999999 9988865311               


Q ss_pred             -HHHHHHHHcCCCCCCCCCCCC
Q psy3166         207 -CRIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       207 -~~~~~~~~~~~~~~~p~~~~~  227 (228)
                       .++.+.+..+.+++.|..+|+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~  290 (326)
T 2w1i_A          269 VFHLIELLKNNGRLPRPDGCPD  290 (326)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCCH
T ss_pred             HHHHHHHhhcCCCCCCCCcccH
Confidence             133455666777888888875


No 158
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=4.1e-37  Score=250.68  Aligned_cols=183  Identities=27%  Similarity=0.403  Sum_probs=150.6

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      -+..++|++.+.||+|+||+||+|++.           +..||+|.++...  ........|+.+++++ +||||+++++
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~hpniv~~~~   85 (322)
T 3soc_A           20 YFQSMPLQLLEVKARGRFGCVWKAQLL-----------NEYVAVKIFPIQD--KQSWQNEYEVYSLPGM-KHENILQFIG   85 (322)
T ss_dssp             EETTEEEEEEEEEECSTTCEEEEEEET-----------TEEEEEEEECGGG--HHHHHHHHHHHTSTTC-CCTTBCCEEE
T ss_pred             ccchhhchhhheecccCceEEEEEEEC-----------CCEEEEEEeecCc--hHHHHHHHHHHHHhcC-CCCCchhhcc
Confidence            367889999999999999999999753           3469999986542  2234556689999999 9999999999


Q ss_pred             EEEcCc-----eEEEEecCCCCcHHHHHHH-------------------hcccCC----------CCcccCCCCCCEeec
Q psy3166          86 CCYKDE-----LRLVVEYCALGDLQSYLRE-------------------EYLSNN----------KVVHRDLATRNILLS  131 (228)
Q Consensus        86 ~~~~~~-----~~lv~e~~~~~~L~~~l~~-------------------~~lh~~----------~i~H~~lk~~nil~~  131 (228)
                      ++....     +++||||+++|+|.+++..                   .|||++          +|+||||||+||+++
T Consensus        86 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~  165 (322)
T 3soc_A           86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK  165 (322)
T ss_dssp             EEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEEC
T ss_pred             eeccCCCCCceEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEEC
Confidence            986532     6899999999999999865                   689999          999999999999999


Q ss_pred             CCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3166         132 SPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN-----IYTNKSDVWSFGVVLWEIVTLGANPYPHI  204 (228)
Q Consensus       132 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-----~~~~~~Diwslg~~~~~l~t~g~~pf~~~  204 (228)
                      .++.+||+|||++..+...... .......||..|+|||++.+.     .++.++|||||||++|+|+| |..||.+.
T Consensus       166 ~~~~~kL~DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~t-g~~pf~~~  241 (322)
T 3soc_A          166 NNLTACIADFGLALKFEAGKSA-GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS-RCTAADGP  241 (322)
T ss_dssp             TTCCEEECCCTTCEEECTTSCC-CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TBTTSSSC
T ss_pred             CCCeEEEccCCcccccccccCc-cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHh-CCCCCCCC
Confidence            9999999999999765443221 122335688999999998863     34567899999999999999 99999764


No 159
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.2e-36  Score=246.36  Aligned_cols=191  Identities=26%  Similarity=0.430  Sum_probs=154.0

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC-HHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD-AKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||.||+|...         .++..||+|.+..... ......+.+|+.+++++ +||||+++++++.
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~   72 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNR---------DTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFR   72 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeC---------CCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheee
Confidence            68999999999999999999843         3455799998865533 34456778999999999 8999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccc
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDI  147 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~  147 (228)
                      ... .++|||++.+++|.+++..                    .|||++||+|+||||+||+++.++.++|+|||++...
T Consensus        73 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  152 (311)
T 4agu_A           73 RKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLL  152 (311)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             cCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhc
Confidence            654 7899999999988887653                    6999999999999999999999999999999998755


Q ss_pred             cccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy3166         148 YEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS  214 (228)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~  214 (228)
                      ......   .....++..|+|||.+.+ ..++.++|+||+|+++|+|++ |..||.+.+..+....+.
T Consensus       153 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~  216 (311)
T 4agu_A          153 TGPSDY---YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS-GVPLWPGKSDVDQLYLIR  216 (311)
T ss_dssp             C---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHH
T ss_pred             cCcccc---cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Confidence            432211   123467788999999876 568999999999999999999 999999988776655443


No 160
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.1e-36  Score=244.08  Aligned_cols=207  Identities=23%  Similarity=0.387  Sum_probs=147.3

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHH-HHHhcCCCCceEE
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN-LMKDVGKHDHIVS   82 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~-~l~~l~~h~ni~~   82 (228)
                      |+.+..++|++.+.||+|+||.||+|+.         ..+++.||+|.++.............|.. .++.+ +||||++
T Consensus         1 S~~i~~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~iv~   70 (290)
T 3fme_A            1 SMEVKADDLEPIMELGRGAYGVVEKMRH---------VPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV-DCPFTVT   70 (290)
T ss_dssp             -CCCCGGGEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTC-CCTTBCC
T ss_pred             CCcccHHhhhhHHhcCCCCCeEEEEEEe---------cCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhC-CCCeEEE
Confidence            5678899999999999999999999984         44566799999976644444444444444 46666 9999999


Q ss_pred             eeeEEEcC-ceEEEEecCCCCcHHHHHHH------------------------hcccCC-CCcccCCCCCCEeecCCCcE
Q psy3166          83 FIGCCYKD-ELRLVVEYCALGDLQSYLRE------------------------EYLSNN-KVVHRDLATRNILLSSPHVV  136 (228)
Q Consensus        83 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~------------------------~~lh~~-~i~H~~lk~~nil~~~~~~~  136 (228)
                      +++++... ..+++||++++ +|.+++..                        .|||++ ||+|+||||+||+++.++.+
T Consensus        71 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~  149 (290)
T 3fme_A           71 FYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQV  149 (290)
T ss_dssp             EEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCE
T ss_pred             EeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCE
Confidence            99998764 48899999975 77766542                        699998 99999999999999999999


Q ss_pred             EEeeccCcccccccccccCCCCCCCCcceeeccccc----ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHH
Q psy3166         137 KISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL----VSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI-PLCRIVH  211 (228)
Q Consensus       137 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~----~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~-~~~~~~~  211 (228)
                      ||+|||++........    .....++..|+|||.+    ....++.++|+||+|+++|+|++ |..||... ...+...
T Consensus       150 kl~Dfg~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~  224 (290)
T 3fme_A          150 KMCDFGISGYLVDDVA----KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAI-LRFPYDSWGTPFQQLK  224 (290)
T ss_dssp             EBCCC-------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHH-TSCSSCCCSCHHHHHH
T ss_pred             EEeecCCccccccccc----ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHH-CCCCccccCchHHHHH
Confidence            9999999875533221    1224577889999996    45568899999999999999999 99999873 3333344


Q ss_pred             HHHcCCCCCCC-CCCC
Q psy3166         212 YLSTGYRMERP-ASCN  226 (228)
Q Consensus       212 ~~~~~~~~~~p-~~~~  226 (228)
                      .......+..| ..+|
T Consensus       225 ~~~~~~~~~~~~~~~~  240 (290)
T 3fme_A          225 QVVEEPSPQLPADKFS  240 (290)
T ss_dssp             HHHHSCCCCCCTTTSC
T ss_pred             HHhccCCCCcccccCC
Confidence            44443344333 3444


No 161
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=8.4e-37  Score=249.27  Aligned_cols=190  Identities=26%  Similarity=0.403  Sum_probs=136.9

Q ss_pred             Cceeee---eeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166          10 ERLILG---EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus        10 ~~~~~~---~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      ++|++.   +.||+|+||.||+|..         ..++..||+|.++..    ......+|+.+++++.+||||++++++
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~---------~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~   74 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVH---------KKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEV   74 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEE---------TTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             hccccccCCCccccCCCeEEEEEEE---------CCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEE
Confidence            356665   7899999999999984         345567999998643    234567899999999669999999999


Q ss_pred             EEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCC---cEEEeecc
Q psy3166          87 CYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPH---VVKISDFG  142 (228)
Q Consensus        87 ~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~---~~kl~dfg  142 (228)
                      +..+. .++||||+++++|.+++..                    .|||+++|+||||||+||+++.++   .+||+|||
T Consensus        75 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg  154 (325)
T 3kn6_A           75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFG  154 (325)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred             EEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccc
Confidence            87754 7899999999999998864                    699999999999999999998765   89999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHc
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL-------CRIVHYLST  215 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~-------~~~~~~~~~  215 (228)
                      ++........   ......+|..|+|||++.+..++.++|+||+||++|+|++ |..||.+.+.       .++..++..
T Consensus       155 ~a~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~~~~~~~~i~~  230 (325)
T 3kn6_A          155 FARLKPPDNQ---PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS-GQVPFQSHDRSLTCTSAVEIMKKIKK  230 (325)
T ss_dssp             TCEECCC-------------------------CCCCHHHHHHHHHHHHHHHHH-SSCTTC-------CCCHHHHHHHHTT
T ss_pred             cceecCCCCC---cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHh-CCCCCCCCccccccccHHHHHHHHHc
Confidence            9875433221   1223456888999999998889999999999999999999 9999987433       345555655


Q ss_pred             C
Q psy3166         216 G  216 (228)
Q Consensus       216 ~  216 (228)
                      +
T Consensus       231 ~  231 (325)
T 3kn6_A          231 G  231 (325)
T ss_dssp             T
T ss_pred             C
Confidence            5


No 162
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=9.1e-37  Score=244.50  Aligned_cols=209  Identities=28%  Similarity=0.503  Sum_probs=161.4

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      ..+..++|++.+.||+|+||.||+|+...+...  .......||+|.+.... ....+.+.+|+.+++++ +||||++++
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~--~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~   78 (289)
T 4fvq_A            3 HKIRNEDLIFNESLGQGTFTKIFKGVRREVGDY--GQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKL-SHKHLVLNY   78 (289)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEEEEECGG--GCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTS-CCTTBCCEE
T ss_pred             EEechhHeeeeeeeccCCCceEEEEEEeccccc--ccccchhhhhhhccccc-HHHHHHHHHHHHHHHhC-CCCCEeEEE
Confidence            357889999999999999999999986543210  01123469999986542 33456788999999999 899999999


Q ss_pred             eEEEcC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCc-------
Q psy3166          85 GCCYKD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHV-------  135 (228)
Q Consensus        85 ~~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~-------  135 (228)
                      +++..+ ..++||||+.+++|.+++..                     .|||+++|+||||||+||+++.++.       
T Consensus        79 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~  158 (289)
T 4fvq_A           79 GVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPP  158 (289)
T ss_dssp             EEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred             EEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccc
Confidence            998764 47899999999999998864                     6999999999999999999998776       


Q ss_pred             -EEEeeccCcccccccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy3166         136 -VKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYL  213 (228)
Q Consensus       136 -~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~  213 (228)
                       +||+|||++........       ..++..|+|||.+.+ ..++.++|+||||+++|+|++.|..||...+........
T Consensus       159 ~~kl~Dfg~~~~~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~  231 (289)
T 4fvq_A          159 FIKLSDPGISITVLPKDI-------LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY  231 (289)
T ss_dssp             EEEECCCCSCTTTSCHHH-------HHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             eeeeccCcccccccCccc-------cCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh
Confidence             99999999864433211       234556999999987 668999999999999999999455667776665555544


Q ss_pred             HcCCCCCCCCCCC
Q psy3166         214 STGYRMERPASCN  226 (228)
Q Consensus       214 ~~~~~~~~p~~~~  226 (228)
                      ...  ...|..++
T Consensus       232 ~~~--~~~~~~~~  242 (289)
T 4fvq_A          232 EDR--HQLPAPKA  242 (289)
T ss_dssp             HTT--CCCCCCSS
T ss_pred             hcc--CCCCCCCC
Confidence            443  33344444


No 163
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=2.2e-36  Score=244.22  Aligned_cols=192  Identities=27%  Similarity=0.412  Sum_probs=158.6

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .++|++.+.||+|+||.||+|+.         ..+++.||+|.++.... .....+.+|+.+++++ +||||+++++++.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~   76 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQ---------RLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKI-KHENIVTLEDIYE   76 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEE---------TTTCCEEEEEEEECC-------HHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             hccceeeeeccCCCCceEEEEEE---------CCCCCEEEEEEEecccc-cchHHHHHHHHHHHhC-CCCCeeehhhhcc
Confidence            36899999999999999999984         33455799999875432 2235678999999999 9999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEee---cCCCcEEEeeccCc
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILL---SSPHVVKISDFGLS  144 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~---~~~~~~kl~dfg~~  144 (228)
                      .+. .+++||++++++|.+++..                    .|||+++|+|+||||+||++   +.++.++|+|||++
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~  156 (304)
T 2jam_A           77 STTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS  156 (304)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred             cCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence            654 7899999999999988754                    69999999999999999999   67889999999998


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY  217 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~  217 (228)
                      .......     .....++..|+|||.+.+..++.++|+||+|+++|+|++ |..||.+.+..++...+.++.
T Consensus       157 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~  223 (304)
T 2jam_A          157 KMEQNGI-----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC-GYPPFYEETESKLFEKIKEGY  223 (304)
T ss_dssp             CCCCCBT-----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHCC
T ss_pred             eecCCCc-----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHcCC
Confidence            6432211     112346778999999998889999999999999999999 999999988888888877764


No 164
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=2.1e-36  Score=252.66  Aligned_cols=204  Identities=24%  Similarity=0.396  Sum_probs=154.9

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCC-CCceEEeee
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGK-HDHIVSFIG   85 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~-h~ni~~~~~   85 (228)
                      ..++|++.+.||+|+||+||++....          +..||+|.+... ........+.+|+.+|+++.+ ||||+++++
T Consensus        54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~----------~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~  123 (390)
T 2zmd_A           54 KGRIYSILKQIGSGGSSKVFQVLNEK----------KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD  123 (390)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTT----------CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             cCCceEEEEEEccCCCeEEEEEEcCC----------CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEE
Confidence            34569999999999999999997422          446999998654 345556788999999999953 699999999


Q ss_pred             EEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          86 CCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        86 ~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      ++..+. +++||| +.+++|.+++..                    .|||+++|+||||||+|||++ ++.+||+|||++
T Consensus       124 ~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a  201 (390)
T 2zmd_A          124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA  201 (390)
T ss_dssp             EEECSSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSS
T ss_pred             EEecCCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCcc
Confidence            887654 789999 568899998764                    699999999999999999995 588999999999


Q ss_pred             ccccccccccCCCCCCCCcceeeccccccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHH
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVS-----------NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL-CRIVHY  212 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-----------~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~-~~~~~~  212 (228)
                      ..+...... .......||+.|+|||++..           ..++.++|||||||++|+|++ |..||..... ...+..
T Consensus       202 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~~  279 (390)
T 2zmd_A          202 NQMQPDTTS-VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHA  279 (390)
T ss_dssp             CCC----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHH-SSCTTTTCCCHHHHHHH
T ss_pred             ccccCCCcc-ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHH-CCCcchhhhHHHHHHHH
Confidence            765432211 11234568899999999865           358889999999999999999 9999987543 233444


Q ss_pred             HHc-CCCCCCCCCC
Q psy3166         213 LST-GYRMERPASC  225 (228)
Q Consensus       213 ~~~-~~~~~~p~~~  225 (228)
                      +.. ....+.|..+
T Consensus       280 ~~~~~~~~~~~~~~  293 (390)
T 2zmd_A          280 IIDPNHEIEFPDIP  293 (390)
T ss_dssp             HHCTTSCCCCCCCS
T ss_pred             HhCccccCCCCccc
Confidence            443 3334445444


No 165
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=5.9e-37  Score=262.62  Aligned_cols=193  Identities=29%  Similarity=0.457  Sum_probs=161.7

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      .++|++.+.||+|+||.||+|+.         ..++..||+|.+.....  ......+.+|+.+++++ +||||++++++
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~   94 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKD---------KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEF   94 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEE---------TTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEE---------CCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEE
Confidence            46899999999999999999984         34556799999864421  23356788999999999 99999999999


Q ss_pred             EEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeec---CCCcEEEeecc
Q psy3166          87 CYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLS---SPHVVKISDFG  142 (228)
Q Consensus        87 ~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~---~~~~~kl~dfg  142 (228)
                      +.... .++|||++.+++|.+++..                    .|||+++|+||||||+||+++   .++.+||+|||
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  174 (484)
T 3nyv_A           95 FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG  174 (484)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTT
T ss_pred             EEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeee
Confidence            87754 7899999999999988754                    699999999999999999994   57899999999


Q ss_pred             CcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY  217 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~  217 (228)
                      ++..+......    ....||+.|+|||++.+ .++.++|+||+||++|+|++ |..||.+.+..++...+.++.
T Consensus       175 ~a~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~  243 (484)
T 3nyv_A          175 LSTHFEASKKM----KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVEKGK  243 (484)
T ss_dssp             HHHHBCCCCSH----HHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCC
T ss_pred             eeEEccccccc----ccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHcCC
Confidence            98755333211    12457888999998876 58999999999999999999 999999999999988888764


No 166
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=1.1e-36  Score=242.51  Aligned_cols=204  Identities=28%  Similarity=0.455  Sum_probs=160.0

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      +..++|++.+.||+|+||.||+|...         .++..||+|.+.....  ......+.+|+.+++++ +||||++++
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~---------~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~   77 (276)
T 2h6d_A            8 VKIGHYVLGDTLGVGTFGKVKIGEHQ---------LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLY   77 (276)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEE
T ss_pred             ceeccEEEEeeecCCCCeEEEEEEEC---------CCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEE
Confidence            45679999999999999999999843         3455799999864311  12235678999999999 899999999


Q ss_pred             eEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          85 GCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        85 ~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      +++.... .+++||++++++|.+++..                    .|||+++++|+||||+||+++.++.++|+|||+
T Consensus        78 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~  157 (276)
T 2h6d_A           78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL  157 (276)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCG
T ss_pred             EEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeeccc
Confidence            9987654 7899999999999998754                    699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIY-TNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMERP  222 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~p  222 (228)
                      +........    .....++..|+|||.+.+..+ +.++|+||||+++|+|++ |..||...+..++.+.+..+ ....|
T Consensus       158 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~-~~~~~  231 (276)
T 2h6d_A          158 SNMMSDGEF----LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLC-GTLPFDDEHVPTLFKKIRGG-VFYIP  231 (276)
T ss_dssp             GGCCCC-----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC-CCCCC
T ss_pred             ccccCCCcc----eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHhhcC-cccCc
Confidence            875433211    123456788999999987765 578999999999999999 99999998888777777766 45556


Q ss_pred             CCCC
Q psy3166         223 ASCN  226 (228)
Q Consensus       223 ~~~~  226 (228)
                      ..++
T Consensus       232 ~~~~  235 (276)
T 2h6d_A          232 EYLN  235 (276)
T ss_dssp             TTSC
T ss_pred             hhcC
Confidence            6554


No 167
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.5e-37  Score=246.63  Aligned_cols=206  Identities=25%  Similarity=0.433  Sum_probs=141.8

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~   83 (228)
                      |-..++|++.+.||+|+||.||+|..         ..++..||+|.+.....  ......+.+|+.+++++ +||||+++
T Consensus         7 g~~~~~y~~~~~lg~G~~g~Vy~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~   76 (278)
T 3cok_A            7 GEKIEDFKVGNLLGKGSFAGVYRAES---------IHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILEL   76 (278)
T ss_dssp             CSSGGGEEEEEEEEECSSEEEEEEEE---------TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCE
T ss_pred             ccccccceeeeeecCCCceEEEEEEE---------ccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeE
Confidence            55667999999999999999999984         33455799999864321  11235678999999999 99999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ++++.... .+++||++++++|.+++..                     .|||+++|+|+||||+||+++.++.++|+||
T Consensus        77 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~df  156 (278)
T 3cok_A           77 YNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADF  156 (278)
T ss_dssp             EEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCC
T ss_pred             EEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEee
Confidence            99987755 7899999999999998764                     5999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRMER  221 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~~~  221 (228)
                      |++........   ......++..|+|||.+.+..++.++|+||+|+++|+|++ |..||...+..+....+... ..+.
T Consensus       157 g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~-~~~~  231 (278)
T 3cok_A          157 GLATQLKMPHE---KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLI-GRPPFDTDTVKNTLNKVVLA-DYEM  231 (278)
T ss_dssp             TTCEECC-------------------------------CTHHHHHHHHHHHHHH-SSCSSCCCSCC-----CCSS-CCCC
T ss_pred             cceeeccCCCC---cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCChhHHHHHHHHhhc-ccCC
Confidence            99875432211   1123456788999999988888999999999999999999 99999886655554443332 2334


Q ss_pred             CCCCC
Q psy3166         222 PASCN  226 (228)
Q Consensus       222 p~~~~  226 (228)
                      |..++
T Consensus       232 ~~~~~  236 (278)
T 3cok_A          232 PSFLS  236 (278)
T ss_dssp             CTTSC
T ss_pred             ccccC
Confidence            44443


No 168
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=1.8e-36  Score=249.49  Aligned_cols=197  Identities=24%  Similarity=0.389  Sum_probs=157.8

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC-HHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD-AKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      -..++|++.+.||+|+||.||+|+.         ..++..||+|.+..... ......+.+|+.+++++ +||||+++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~   83 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFGEVFKARH---------RKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIE   83 (351)
T ss_dssp             CBGGGEEEEEECSSCSTTSEEEEEE---------TTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             ccccceeEEEEEecCCCcEEEEEEE---------CCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhh
Confidence            3567999999999999999999984         34455799998864422 22235677899999999 8999999999


Q ss_pred             EEEc---------CceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCc
Q psy3166          86 CCYK---------DELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHV  135 (228)
Q Consensus        86 ~~~~---------~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~  135 (228)
                      ++..         +..++||||+.+ +|.+.+..                     .|||++||+||||||+||+++.++.
T Consensus        84 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~  162 (351)
T 3mi9_A           84 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV  162 (351)
T ss_dssp             EEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred             eeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCC
Confidence            8764         237899999975 66665432                     6999999999999999999999999


Q ss_pred             EEEeeccCcccccccccc-cCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy3166         136 VKISDFGLSEDIYEQNVF-QNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYL  213 (228)
Q Consensus       136 ~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~  213 (228)
                      +||+|||++..+...... ........+|..|+|||++.+ ..++.++|+|||||++|+|++ |..||.+.+..+....+
T Consensus       163 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i  241 (351)
T 3mi9_A          163 LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALI  241 (351)
T ss_dssp             EEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHH
T ss_pred             EEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Confidence            999999998765432211 122234567889999999876 457999999999999999999 99999998887776665


Q ss_pred             Hc
Q psy3166         214 ST  215 (228)
Q Consensus       214 ~~  215 (228)
                      ..
T Consensus       242 ~~  243 (351)
T 3mi9_A          242 SQ  243 (351)
T ss_dssp             HH
T ss_pred             HH
Confidence            54


No 169
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.4e-36  Score=253.18  Aligned_cols=188  Identities=22%  Similarity=0.393  Sum_probs=149.4

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      ....++|++.+.||+|+||+||+|+.         ..++..||+|.+......     ..+|+++++.+ +||||+++++
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~---------~~~~~~vAiK~~~~~~~~-----~~~E~~il~~l-~hpnIv~l~~   67 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFD---------IESGKRFALKKVLQDPRY-----KNRELDIMKVL-DHVNIIKLVD   67 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEE---------TTTCCEEEEEEEECCTTS-----CCHHHHHHTTC-CCTTBCCEEE
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEE---------CCCCCEEEEEEEecCcch-----HHHHHHHHHHc-CCCCccchhh
Confidence            45678999999999999999999984         345567999998654221     23699999999 9999999999


Q ss_pred             EEEcC---------------------------------------ceEEEEecCCCCcHHHHHHH----------------
Q psy3166          86 CCYKD---------------------------------------ELRLVVEYCALGDLQSYLRE----------------  110 (228)
Q Consensus        86 ~~~~~---------------------------------------~~~lv~e~~~~~~L~~~l~~----------------  110 (228)
                      ++...                                       .+++||||+++ +|.+.+..                
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i  146 (383)
T 3eb0_A           68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIY  146 (383)
T ss_dssp             EEEEC-------------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred             eeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHH
Confidence            87431                                       16799999974 77666542                


Q ss_pred             --------hcccCCCCcccCCCCCCEeec-CCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccC-CCCch
Q psy3166         111 --------EYLSNNKVVHRDLATRNILLS-SPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN-IYTNK  180 (228)
Q Consensus       111 --------~~lh~~~i~H~~lk~~nil~~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~  180 (228)
                              .|||++||+||||||+||+++ .++.+||+|||++..+....    ......++..|+|||.+.+. .++.+
T Consensus       147 ~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~  222 (383)
T 3eb0_A          147 IYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----PSVAYICSRFYRAPELMLGATEYTPS  222 (383)
T ss_dssp             HHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS----CCCCCCCCSSCCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC----CCcCcccCCCccCHHHhcCCCCCCcc
Confidence                    699999999999999999998 58899999999997553332    12234567789999998765 48999


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy3166         181 SDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS  214 (228)
Q Consensus       181 ~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~  214 (228)
                      +|+||+||++|+|++ |..||.+.+..+.+..+.
T Consensus       223 ~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~  255 (383)
T 3eb0_A          223 IDLWSIGCVFGELIL-GKPLFSGETSIDQLVRII  255 (383)
T ss_dssp             HHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Confidence            999999999999999 999999988877766544


No 170
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.2e-36  Score=248.36  Aligned_cols=207  Identities=24%  Similarity=0.400  Sum_probs=155.1

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCCC-CceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGKH-DHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~h-~ni~~~   83 (228)
                      .+..++|++.+.||+|+||.||++...          ++..||+|.+... ........+.+|+.+|+++.+| |||+++
T Consensus         5 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~   74 (343)
T 3dbq_A            5 SVKGRIYSILKQIGSGGSSKVFQVLNE----------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL   74 (343)
T ss_dssp             ESSSCEEEEEEEESCCSSEEEEEEECT----------TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             eeecCEEEEEEEEecCCCeEEEEEEeC----------CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEE
Confidence            356789999999999999999999742          2446999998754 3445567788999999999433 999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++..+. .++||| +.+++|.+++..                    .|||+++|+||||||+|||++ ++.+||+|||
T Consensus        75 ~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG  152 (343)
T 3dbq_A           75 YDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFG  152 (343)
T ss_dssp             EEEEECSSEEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred             eeeEeeCCEEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecc
Confidence            99987755 789999 567899998764                    699999999999999999997 6889999999


Q ss_pred             CcccccccccccCCCCCCCCcceeeccccccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHH
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVS-----------NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC-RIV  210 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-----------~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~-~~~  210 (228)
                      ++..+...... .......||..|+|||++..           ..++.++|||||||++|+|++ |..||...... ...
T Consensus       153 ~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~  230 (343)
T 3dbq_A          153 IANQMQPDTTS-VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKL  230 (343)
T ss_dssp             SSCCC-------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHH-SSCTTTTCCSHHHHH
T ss_pred             cccccCccccc-ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHh-CCCcchhhhhHHHHH
Confidence            99765433211 11224567889999999864           568889999999999999999 99999875433 223


Q ss_pred             HH-HHcCCCCCCCCCCC
Q psy3166         211 HY-LSTGYRMERPASCN  226 (228)
Q Consensus       211 ~~-~~~~~~~~~p~~~~  226 (228)
                      .. +....+.+.|..++
T Consensus       231 ~~~~~~~~~~~~~~~~~  247 (343)
T 3dbq_A          231 HAIIDPNHEIEFPDIPE  247 (343)
T ss_dssp             HHHHCTTSCCCCCCCSC
T ss_pred             HHHhcCCcccCCcccCC
Confidence            33 33344445555444


No 171
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=4.8e-38  Score=261.47  Aligned_cols=186  Identities=16%  Similarity=0.140  Sum_probs=145.0

Q ss_pred             ccCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC--CCHHHHHHHHHHHHHHHhcC--CCC
Q psy3166           3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAKTYDKFLKEINLMKDVG--KHD   78 (228)
Q Consensus         3 ~~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~e~~~l~~l~--~h~   78 (228)
                      ..++.+.++|++.+.||+|+||.||+|++         ..++..||+|.++..  ......+.+.+|+.+++.+.  +||
T Consensus        66 ~~~~~~~~~y~~~~~lG~G~~g~V~~a~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hp  136 (377)
T 3byv_A           66 SELGERPRTLVRGTVLGQEDPYAYLEATD---------QETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQ  136 (377)
T ss_dssp             ESSSCCCEEEEEEEEEEEETTEEEEEEEC----------CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSH
T ss_pred             eecCCCCceEEEcceeecCCCEEEEEEEE---------CCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCH
Confidence            34567788999999999999999999984         345567999998743  22334567889995444442  899


Q ss_pred             ceEEee-------eEEEcC------------------ceEEEEecCCCCcHHHHHHH-----------------------
Q psy3166          79 HIVSFI-------GCCYKD------------------ELRLVVEYCALGDLQSYLRE-----------------------  110 (228)
Q Consensus        79 ni~~~~-------~~~~~~------------------~~~lv~e~~~~~~L~~~l~~-----------------------  110 (228)
                      ||++++       +++...                  ..+++|||+ +|+|.+++..                       
T Consensus       137 niv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi  215 (377)
T 3byv_A          137 KQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQV  215 (377)
T ss_dssp             HHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHH
Confidence            999988       544432                  278999999 6799988752                       


Q ss_pred             ----hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccC-----------
Q psy3166         111 ----EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN-----------  175 (228)
Q Consensus       111 ----~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-----------  175 (228)
                          .|||+++|+||||||+|||++.++.+||+|||++......      .....| ..|+|||++.+.           
T Consensus       216 ~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~  288 (377)
T 3byv_A          216 IRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR------VVSSVS-RGFEPPELEARRATISYHRDRRT  288 (377)
T ss_dssp             HHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE------EECCCC-TTCCCHHHHHHHTSTHHHHCCEE
T ss_pred             HHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCc------ccCCCC-cCccChhhhcccccccccccccc
Confidence                5999999999999999999999999999999998743221      122345 679999999877           


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         176 IYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       176 ~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      .++.++|+|||||++|+|++ |..||.+...
T Consensus       289 ~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~  318 (377)
T 3byv_A          289 LMTFSFDAWALGLVIYWIWC-ADLPITKDAA  318 (377)
T ss_dssp             ECCHHHHHHHHHHHHHHHHH-SSCCC-----
T ss_pred             cCChhhhHHHHHHHHHHHHH-CCCCCccccc
Confidence            79999999999999999999 9999987553


No 172
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=3e-37  Score=258.29  Aligned_cols=198  Identities=24%  Similarity=0.396  Sum_probs=159.6

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      ...++|++.+.||+|+||.||+|++.         .++..||+|.++..........+.+|+++++++ +||||++++++
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~---------~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~   75 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHK---------KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAI   75 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEEC---------CCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEe
Confidence            45679999999999999999999853         445579999987553333456678999999999 99999999998


Q ss_pred             EEcC---ceEEEEecCCCCcHHHHHHH-----------------------hcccCCCCcccCCCCCCEee----cCCCcE
Q psy3166          87 CYKD---ELRLVVEYCALGDLQSYLRE-----------------------EYLSNNKVVHRDLATRNILL----SSPHVV  136 (228)
Q Consensus        87 ~~~~---~~~lv~e~~~~~~L~~~l~~-----------------------~~lh~~~i~H~~lk~~nil~----~~~~~~  136 (228)
                      +...   ..++||||+++++|.+++..                       .|||+++|+||||||+||++    +.++.+
T Consensus        76 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~  155 (396)
T 4eut_A           76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVY  155 (396)
T ss_dssp             EECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEE
T ss_pred             eccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeE
Confidence            8653   47899999999999988653                       69999999999999999998    667789


Q ss_pred             EEeeccCcccccccccccCCCCCCCCcceeeccccccc--------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC----
Q psy3166         137 KISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS--------NIYTNKSDVWSFGVVLWEIVTLGANPYPHI----  204 (228)
Q Consensus       137 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--------~~~~~~~Diwslg~~~~~l~t~g~~pf~~~----  204 (228)
                      ||+|||++........    .....|+..|+|||++..        ..++.++|+|||||++|+|++ |..||...    
T Consensus       156 kL~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~  230 (396)
T 4eut_A          156 KLTDFGAARELEDDEQ----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT-GSLPFRPFEGPR  230 (396)
T ss_dssp             EECCGGGCEECCCGGG----SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHH-SSCSEECTTCTT
T ss_pred             EEecCCCceEccCCCc----cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHH-CCCCCCCCCccc
Confidence            9999999976544322    223567888999998864        456789999999999999999 99999753    


Q ss_pred             CHHHHHHHHHcCCCC
Q psy3166         205 PLCRIVHYLSTGYRM  219 (228)
Q Consensus       205 ~~~~~~~~~~~~~~~  219 (228)
                      ...++...+..+.++
T Consensus       231 ~~~~~~~~~~~~~p~  245 (396)
T 4eut_A          231 RNKEVMYKIITGKPS  245 (396)
T ss_dssp             TCHHHHHHHHHSCCT
T ss_pred             chHHHHHHHhcCCCc
Confidence            234566666666443


No 173
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=5.5e-36  Score=239.30  Aligned_cols=192  Identities=24%  Similarity=0.421  Sum_probs=158.7

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH-----HHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-----KTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      ++|++.+.||+|+||.||+|+..         .++..||+|.++.....     ...+.+.+|+.+++++ +||||++++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~   74 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQK---------GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLH   74 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEc---------CCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehh
Confidence            57999999999999999999853         34457999998654211     1356788999999999 899999999


Q ss_pred             eEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCC----cEEEe
Q psy3166          85 GCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPH----VVKIS  139 (228)
Q Consensus        85 ~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~----~~kl~  139 (228)
                      +++.... .+++||++++++|.+++..                    .|||+++++|+||||+||+++.++    .++|+
T Consensus        75 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~  154 (283)
T 3bhy_A           75 DIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLI  154 (283)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEEC
T ss_pred             heecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEE
Confidence            9987654 7899999999999998864                    689999999999999999998876    89999


Q ss_pred             eccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       140 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      |||++........    .....++..|+|||.+....++.++|+||||+++|+|++ |..||.+.+..+....+...
T Consensus       155 dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~  226 (283)
T 3bhy_A          155 DFGIAHKIEAGNE----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGETKQETLTNISAV  226 (283)
T ss_dssp             CCTTCEECC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHTT
T ss_pred             ecccceeccCCCc----ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHH-CCCCCCCcchHHHHHHhHhc
Confidence            9999875533221    123457788999999988889999999999999999999 99999998888777776665


No 174
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=3.7e-37  Score=259.54  Aligned_cols=194  Identities=27%  Similarity=0.447  Sum_probs=148.6

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-------CHHHHHHHHHHHHHHHhcCCCCceE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-------DAKTYDKFLKEINLMKDVGKHDHIV   81 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~~h~ni~   81 (228)
                      .++|++.+.||+|+||.||+|..         ..++..||+|.+....       .......+.+|+.+|+++ +||||+
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv  203 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFE---------RKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCII  203 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEE---------TTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBC
T ss_pred             hccEEEEeEEeeCCCeEEEEEEE---------CCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEe
Confidence            46899999999999999999984         3455679999986431       111123477899999999 999999


Q ss_pred             EeeeEEEcCceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCC---cEEE
Q psy3166          82 SFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPH---VVKI  138 (228)
Q Consensus        82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~---~~kl  138 (228)
                      ++++++..+..++||||+++++|.+++..                    .|||+++|+||||||+|||++.++   .+||
T Consensus       204 ~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl  283 (419)
T 3i6u_A          204 KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI  283 (419)
T ss_dssp             CCCEEEESSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred             eEEEEEecCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEE
Confidence            99999888889999999999999876532                    699999999999999999997544   5999


Q ss_pred             eeccCcccccccccccCCCCCCCCcceeeccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHH
Q psy3166         139 SDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC-RIVHYLS  214 (228)
Q Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~---~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~-~~~~~~~  214 (228)
                      +|||+++.+.....    .....||..|+|||++.+   ..++.++|+|||||++|+|++ |..||...... .+...+.
T Consensus       284 ~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~i~  358 (419)
T 3i6u_A          284 TDFGHSKILGETSL----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS-GYPPFSEHRTQVSLKDQIT  358 (419)
T ss_dssp             CCSSTTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHH-SSCSSCCCSSSCCHHHHHH
T ss_pred             eecccceecCCCcc----ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHH-CCCCCCCCcchHHHHHHHh
Confidence            99999976543221    223567889999999863   457889999999999999999 99999875443 3445555


Q ss_pred             cCC
Q psy3166         215 TGY  217 (228)
Q Consensus       215 ~~~  217 (228)
                      .+.
T Consensus       359 ~~~  361 (419)
T 3i6u_A          359 SGK  361 (419)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            553


No 175
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.7e-35  Score=237.43  Aligned_cols=197  Identities=26%  Similarity=0.421  Sum_probs=158.8

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      ....+.|++.+.||+|+||.||+|...         .++..||+|.+... ........+.+|+.+++++ +||||++++
T Consensus        22 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~---------~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~   91 (290)
T 1t4h_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDT---------ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFY   91 (290)
T ss_dssp             CTTSCEEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred             ccCceeEEeeeeccCCCCeEEEEeEec---------CCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeee
Confidence            355667899999999999999999843         34557999998654 3445567788999999999 999999999


Q ss_pred             eEEEc-----CceEEEEecCCCCcHHHHHHH--------------------hcccCCC--CcccCCCCCCEeec-CCCcE
Q psy3166          85 GCCYK-----DELRLVVEYCALGDLQSYLRE--------------------EYLSNNK--VVHRDLATRNILLS-SPHVV  136 (228)
Q Consensus        85 ~~~~~-----~~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~--i~H~~lk~~nil~~-~~~~~  136 (228)
                      +++..     ..+++||||+++++|.+++..                    .|||+++  |+|+||||+||+++ .++.+
T Consensus        92 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~  171 (290)
T 1t4h_A           92 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSV  171 (290)
T ss_dssp             EEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCE
T ss_pred             eeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCE
Confidence            98754     227899999999999998864                    6999999  99999999999998 78899


Q ss_pred             EEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHc
Q psy3166         137 KISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL-CRIVHYLST  215 (228)
Q Consensus       137 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~-~~~~~~~~~  215 (228)
                      +|+|||++.......     .....++..|+|||.+.+ .++.++|+||+|+++|+|++ |..||..... ......+..
T Consensus       172 kl~Dfg~~~~~~~~~-----~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~~~~~~~~~  244 (290)
T 1t4h_A          172 KIGDLGLATLKRASF-----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMAT-SEYPYSECQNAAQIYRRVTS  244 (290)
T ss_dssp             EECCTTGGGGCCTTS-----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHH-SSCTTTTCSSHHHHHHHHTT
T ss_pred             EEeeCCCcccccccc-----cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHh-CCCCCCCcCcHHHHHHHHhc
Confidence            999999986432221     123457788999998764 58999999999999999999 9999988544 444555666


Q ss_pred             CCCC
Q psy3166         216 GYRM  219 (228)
Q Consensus       216 ~~~~  219 (228)
                      +.++
T Consensus       245 ~~~~  248 (290)
T 1t4h_A          245 GVKP  248 (290)
T ss_dssp             TCCC
T ss_pred             cCCc
Confidence            5444


No 176
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=8e-36  Score=241.47  Aligned_cols=205  Identities=25%  Similarity=0.427  Sum_probs=154.0

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC--CCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN--ADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      ..++|++.+.||+|+||.||+|...         .++..||+|.++..  ........+.+|+.+++++ +||||+++++
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~   99 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACL---------LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYA   99 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEET---------TTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEc---------CCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEE
Confidence            4568999999999999999999843         34457999998743  2445567788999999999 9999999999


Q ss_pred             EEEcC-ceEEEEecCCCCcHHHHHHH------------------------hcccCCCCcccCCCCCCEeecCCCcEEEee
Q psy3166          86 CCYKD-ELRLVVEYCALGDLQSYLRE------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISD  140 (228)
Q Consensus        86 ~~~~~-~~~lv~e~~~~~~L~~~l~~------------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~d  140 (228)
                      ++..+ ..+++||++.+++|.+++..                        .|||+++++|+||||+||+++.++.++|+|
T Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~D  179 (310)
T 2wqm_A          100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGD  179 (310)
T ss_dssp             EEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECC
T ss_pred             EEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEe
Confidence            98765 47899999999999988753                        589999999999999999999999999999


Q ss_pred             ccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC
Q psy3166         141 FGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI--PLCRIVHYLSTGYR  218 (228)
Q Consensus       141 fg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~--~~~~~~~~~~~~~~  218 (228)
                      ||++........   ......++..|+|||.+.+..++.++|+||||+++|+|++ |..||.+.  ...++...+..+..
T Consensus       180 fg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~  255 (310)
T 2wqm_A          180 LGLGRFFSSKTT---AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYGDKMNLYSLCKKIEQCDY  255 (310)
T ss_dssp             C---------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTC---CCHHHHHHHHHTTCS
T ss_pred             ccceeeecCCCc---cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHh-CCCCCcccchhHHHHHHHhhcccC
Confidence            999875433221   1123456778999999998889999999999999999999 99999764  33455666766655


Q ss_pred             CCCC-CCCC
Q psy3166         219 MERP-ASCN  226 (228)
Q Consensus       219 ~~~p-~~~~  226 (228)
                      ++.+ ..+|
T Consensus       256 ~~~~~~~~~  264 (310)
T 2wqm_A          256 PPLPSDHYS  264 (310)
T ss_dssp             CCCCTTTSC
T ss_pred             CCCcccccC
Confidence            5443 4444


No 177
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=1.3e-36  Score=251.70  Aligned_cols=191  Identities=18%  Similarity=0.287  Sum_probs=148.7

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHH----------HHHHHHHHHHHhcCC
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTY----------DKFLKEINLMKDVGK   76 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~----------~~~~~e~~~l~~l~~   76 (228)
                      +..++|++.+.||+|+||.||+|.+..+.    ....+..||+|.+.........          ....+|+..++.+ +
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~  106 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSE----SVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL-K  106 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSS----CCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC-S
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCcc----ccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc-c
Confidence            44569999999999999999999876543    2234567999998654311100          1233455566667 7


Q ss_pred             CCceEEeeeEEEcC-----ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEee
Q psy3166          77 HDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILL  130 (228)
Q Consensus        77 h~ni~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~  130 (228)
                      ||||+++++++...     ..++||||+ +++|.+++..                     .|||+++|+||||||+|||+
T Consensus       107 h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill  185 (364)
T 3op5_A          107 YLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL  185 (364)
T ss_dssp             CCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEE
Confidence            99999999987652     278999999 9999998764                     69999999999999999999


Q ss_pred             c--CCCcEEEeeccCccccccccccc----CCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3166         131 S--SPHVVKISDFGLSEDIYEQNVFQ----NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI  204 (228)
Q Consensus       131 ~--~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~  204 (228)
                      +  .++.+||+|||+++.+.......    .......||..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus       186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~Pf~~~  264 (364)
T 3op5_A          186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT-GHLPWEDN  264 (364)
T ss_dssp             ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SCCTTGGG
T ss_pred             ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHh-CCCCcccc
Confidence            9  78999999999997654432211    11234558889999999998889999999999999999999 99999863


No 178
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=2e-35  Score=237.65  Aligned_cols=196  Identities=27%  Similarity=0.408  Sum_probs=162.4

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC----C----HHHHHHHHHHHHHHHhcCCCCc
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA----D----AKTYDKFLKEINLMKDVGKHDH   79 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~----~~~~~~~~~e~~~l~~l~~h~n   79 (228)
                      -.++|++.+.||+|+||.||+|..         ..++..||+|.++...    .    ......+.+|+.+++++.+|||
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~   85 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIH---------KPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN   85 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred             hhhccceeeeecCCCceEEEEEEE---------cCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            357999999999999999999984         4455679999986442    1    1234567899999999966999


Q ss_pred             eEEeeeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEE
Q psy3166          80 IVSFIGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKI  138 (228)
Q Consensus        80 i~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl  138 (228)
                      |+++++++..+. .++|||++++++|.+++..                    .|||++|++|+||||+||+++.++.++|
T Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  165 (298)
T 1phk_A           86 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKL  165 (298)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             EeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEE
Confidence            999999987655 7899999999999998764                    6999999999999999999999999999


Q ss_pred             eeccCcccccccccccCCCCCCCCcceeecccccc------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy3166         139 SDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV------SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHY  212 (228)
Q Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~------~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~  212 (228)
                      +|||++..+.....    .....++..|+|||++.      ...++.++|+||||+++|+|++ |..||...+..+....
T Consensus       166 ~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~  240 (298)
T 1phk_A          166 TDFGFSCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWHRKQMLMLRM  240 (298)
T ss_dssp             CCCTTCEECCTTCC----BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHH
T ss_pred             ecccchhhcCCCcc----cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHH-CCCCCcCccHHHHHHH
Confidence            99999875533221    22356788899999885      3457889999999999999999 9999999888877777


Q ss_pred             HHcCC
Q psy3166         213 LSTGY  217 (228)
Q Consensus       213 ~~~~~  217 (228)
                      +..+.
T Consensus       241 ~~~~~  245 (298)
T 1phk_A          241 IMSGN  245 (298)
T ss_dssp             HHHTC
T ss_pred             HhcCC
Confidence            76653


No 179
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=2.3e-36  Score=247.04  Aligned_cols=194  Identities=25%  Similarity=0.391  Sum_probs=155.2

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      ...++|++.+.||+|+||.||+|+..         .++..||+|.+.... .......+.+|+.+++++ +||||+++++
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~   91 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNK---------DTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLE   91 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEET---------TTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEEC---------CCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEE
Confidence            35679999999999999999999843         445579999986543 344456678999999999 8999999999


Q ss_pred             EEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          86 CCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        86 ~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      ++.... .++|||++.+++|.+++..                    .|||++||+|+||||+||+++.++.+||+|||++
T Consensus        92 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~  171 (331)
T 4aaa_A           92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA  171 (331)
T ss_dssp             EEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCc
Confidence            987655 7899999999888876532                    6999999999999999999999999999999998


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS  214 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~  214 (228)
                      ..+......   .....++..|+|||.+.+. .++.++|+||+||++|+|++ |..||.+.+..+....+.
T Consensus       172 ~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~  238 (331)
T 4aaa_A          172 RTLAAPGEV---YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM-GEPLFPGDSDIDQLYHIM  238 (331)
T ss_dssp             ---------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHH
T ss_pred             eeecCCccc---cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Confidence            754332211   1234567789999998865 68899999999999999999 999999988776655443


No 180
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=8.2e-36  Score=242.94  Aligned_cols=198  Identities=29%  Similarity=0.510  Sum_probs=155.9

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      ..+.++|++.+.||+|+||.||+|++.         .++..||+|.+......  ...+.+|+.+++++.+||||+++++
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~---------~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~   88 (326)
T 2x7f_A           20 RDPAGIFELVELVGNGTYGQVYKGRHV---------KTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYG   88 (326)
T ss_dssp             CCCTTTEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEECCSST--THHHHHHHHHHHHHCCSTTBCCEEE
T ss_pred             cCCCCcEEEEEEeccCCCEEEEEEEEC---------CCCCeEEEEEEecCccc--HHHHHHHHHHHHhccCCCCeeeeee
Confidence            456789999999999999999999853         34457999998654322  3567889999999978999999999


Q ss_pred             EEEc-------CceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcE
Q psy3166          86 CCYK-------DELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVV  136 (228)
Q Consensus        86 ~~~~-------~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~  136 (228)
                      ++..       +..+++||++.+++|.+++..                      .|||++||+|+||||+||+++.++.+
T Consensus        89 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~  168 (326)
T 2x7f_A           89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV  168 (326)
T ss_dssp             EEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCE
T ss_pred             EEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCE
Confidence            9864       347899999999999998764                      58999999999999999999999999


Q ss_pred             EEeeccCcccccccccccCCCCCCCCcceeecccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy3166         137 KISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV-----SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVH  211 (228)
Q Consensus       137 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~  211 (228)
                      ||+|||++.......   .......++..|+|||.+.     ...++.++|+|||||++|+|++ |..||.+....+...
T Consensus       169 kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~  244 (326)
T 2x7f_A          169 KLVDFGVSAQLDRTV---GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE-GAPPLCDMHPMRALF  244 (326)
T ss_dssp             EECCCTTTC----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHH
T ss_pred             EEeeCcCceecCcCc---cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHh-CCCCCCCCcHHHHHH
Confidence            999999987543221   1122346788899999987     4568899999999999999999 999999988776666


Q ss_pred             HHHcCCC
Q psy3166         212 YLSTGYR  218 (228)
Q Consensus       212 ~~~~~~~  218 (228)
                      .+.....
T Consensus       245 ~~~~~~~  251 (326)
T 2x7f_A          245 LIPRNPA  251 (326)
T ss_dssp             HHHHSCC
T ss_pred             HhhcCcc
Confidence            6555433


No 181
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=4.7e-36  Score=239.69  Aligned_cols=198  Identities=24%  Similarity=0.321  Sum_probs=159.2

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||.||+|...         .++..||+|.++... .......+.+|+..+.++.+||||+++++++.
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~   81 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKR---------LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA   81 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEc---------CCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeee
Confidence            68999999999999999999843         345579999987542 23345678899999999889999999999987


Q ss_pred             cC-ceEEEEecCCCCcHHHHHHH------------------------hcccCCCCcccCCCCCCEeecCC----------
Q psy3166          89 KD-ELRLVVEYCALGDLQSYLRE------------------------EYLSNNKVVHRDLATRNILLSSP----------  133 (228)
Q Consensus        89 ~~-~~~lv~e~~~~~~L~~~l~~------------------------~~lh~~~i~H~~lk~~nil~~~~----------  133 (228)
                      .+ ..+++||++++++|.+++..                        .|||+++|+|+||||+||+++.+          
T Consensus        82 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~  161 (289)
T 1x8b_A           82 EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEG  161 (289)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------
T ss_pred             cCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccc
Confidence            64 47899999999999998753                        59999999999999999999844          


Q ss_pred             ---------CcEEEeeccCcccccccccccCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3166         134 ---------HVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYPH  203 (228)
Q Consensus       134 ---------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~~  203 (228)
                               ..++|+|||.+......       ....++..|+|||.+.+. .++.++|+|||||++|+|++ |..|+..
T Consensus       162 ~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-~~~~~~~  233 (289)
T 1x8b_A          162 DEDDWASNKVMFKIGDLGHVTRISSP-------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAG-AEPLPRN  233 (289)
T ss_dssp             --------CCCEEECCCTTCEETTCS-------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTT-CCCCCSS
T ss_pred             ccccccCCceEEEEcccccccccCCc-------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhc-CCCCCcc
Confidence                     47999999998754322       234578889999999866 45689999999999999998 8877654


Q ss_pred             CCHHHHHHHHHcCCCCCCCCCCCC
Q psy3166         204 IPLCRIVHYLSTGYRMERPASCNE  227 (228)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~p~~~~~  227 (228)
                      .   .....+..+..+..|..+|+
T Consensus       234 ~---~~~~~~~~~~~~~~~~~~~~  254 (289)
T 1x8b_A          234 G---DQWHEIRQGRLPRIPQVLSQ  254 (289)
T ss_dssp             S---HHHHHHHTTCCCCCSSCCCH
T ss_pred             h---hHHHHHHcCCCCCCCcccCH
Confidence            3   34556677777777777664


No 182
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1.7e-36  Score=247.47  Aligned_cols=193  Identities=27%  Similarity=0.367  Sum_probs=156.7

Q ss_pred             Cceeee-eeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166          10 ERLILG-EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus        10 ~~~~~~-~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      ++|.+. +.||+|+||.||+|+.         ..++..||+|.++... .......+.+|+.+++++.+||||+++++++
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~   98 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCIS---------KSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY   98 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEE---------TTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             hEEeeccceeCCCCCeEEEEEEE---------CCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            357776 8999999999999984         3445679999987542 2233467889999999997789999999998


Q ss_pred             EcCc-eEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecC---CCcEEEeec
Q psy3166          88 YKDE-LRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSS---PHVVKISDF  141 (228)
Q Consensus        88 ~~~~-~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~---~~~~kl~df  141 (228)
                      .... .++||||+.+++|.+++..                      .|||++||+||||||+||+++.   ++.+||+||
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Df  178 (327)
T 3lm5_A           99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDF  178 (327)
T ss_dssp             ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred             EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeC
Confidence            7654 7899999999998877532                      6999999999999999999987   789999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      |++..+.....    .....++..|+|||++....++.++|+||||+++|+|++ |..||.+.+..+....+...
T Consensus       179 g~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~  248 (327)
T 3lm5_A          179 GMSRKIGHACE----LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT-HTSPFVGEDNQETYLNISQV  248 (327)
T ss_dssp             GGCEEC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHT
T ss_pred             ccccccCCccc----cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchHHHHHHHhc
Confidence            99875533221    123567889999999998889999999999999999999 99999998888777666554


No 183
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=2.9e-36  Score=244.55  Aligned_cols=186  Identities=25%  Similarity=0.433  Sum_probs=146.4

Q ss_pred             CCceeee-eeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILG-EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~-~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++. +.||+|+||.||+|.         +..++..||+|.++.... .....+.+|++++.++.+||||+++++++
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~---------~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~h~~i~~~~~~~   80 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCI---------NLITSQEYAVKIIEKQPG-HIRSRVFREVEMLYQCQGHRNVLELIEFF   80 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEE---------CSSSCCEEEEEEEECCSS-CCHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEE---------EcCCCcEEEEEEEeeCcc-hhHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            4678885 789999999999997         444566799999875532 23467889999999965899999999998


Q ss_pred             EcC-ceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCc---EEEeeccC
Q psy3166          88 YKD-ELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHV---VKISDFGL  143 (228)
Q Consensus        88 ~~~-~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~---~kl~dfg~  143 (228)
                      ..+ ..++|||++++++|.+++..                    .|||+++|+||||||+||+++.++.   +||+|||+
T Consensus        81 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~  160 (316)
T 2ac3_A           81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDL  160 (316)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred             eeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence            764 48899999999999998864                    6999999999999999999998765   99999999


Q ss_pred             cccccccccc----cCCCCCCCCcceeeccccccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q psy3166         144 SEDIYEQNVF----QNGEPSEKLPIRWLALESLVS-----NIYTNKSDVWSFGVVLWEIVTLGANPYPHIP  205 (228)
Q Consensus       144 ~~~~~~~~~~----~~~~~~~~~~~~~~~Pe~~~~-----~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~  205 (228)
                      +.........    ........|+..|+|||++..     ..++.++|+|||||++|+|++ |..||.+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~  230 (316)
T 2ac3_A          161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS-GYPPFVGRC  230 (316)
T ss_dssp             CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHH-SSCSCCCCC
T ss_pred             ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHH-CCCCCcccc
Confidence            8654322111    111223457889999999875     457889999999999999999 999998754


No 184
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=5.3e-36  Score=240.93  Aligned_cols=186  Identities=19%  Similarity=0.277  Sum_probs=153.9

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      .+-.++|++.+.||+|+||.||+|..         ..++..||+|.+......   ..+.+|+.+++++.+|+|++.+++
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~---~~~~~e~~~~~~l~~~~~i~~~~~   73 (298)
T 1csn_A            6 NVVGVHYKVGRRIGEGSFGVIFEGTN---------LLNNQQVAIKFEPRRSDA---PQLRDEYRTYKLLAGCTGIPNVYY   73 (298)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEE---------TTTTEEEEEEEEECCTTS---CCHHHHHHHHHHTTTCTTCCCEEE
T ss_pred             cccccceEEEEEEeecCCEEEEEEEE---------CCCCcEEEEEEeccCCcc---HHHHHHHHHHHHHhcCCCCCeEEe
Confidence            45578999999999999999999983         445567999998644322   346789999999988999999999


Q ss_pred             EEEcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCc-----EEE
Q psy3166          86 CCYKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHV-----VKI  138 (228)
Q Consensus        86 ~~~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~-----~kl  138 (228)
                      ++..+. .+++||++ +++|.+++..                     .|||+++|+||||||+||+++.++.     +||
T Consensus        74 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl  152 (298)
T 1csn_A           74 FGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYV  152 (298)
T ss_dssp             EEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred             ecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEE
Confidence            887654 78999999 9999999874                     5999999999999999999987665     999


Q ss_pred             eeccCccccccccccc----CCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q psy3166         139 SDFGLSEDIYEQNVFQ----NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP  205 (228)
Q Consensus       139 ~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~  205 (228)
                      +|||++..........    .......||..|+|||++.+..++.++|+||||+++|+|++ |..||.+.+
T Consensus       153 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~  222 (298)
T 1csn_A          153 VDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR-GSLPWQGLK  222 (298)
T ss_dssp             CCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCC
T ss_pred             EECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHc-CCCCcchhh
Confidence            9999987654332111    12334568889999999998889999999999999999999 999998843


No 185
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=1.6e-36  Score=251.57  Aligned_cols=188  Identities=23%  Similarity=0.423  Sum_probs=141.4

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||.||+|.         +..++..||+|.+... .......++.+|+.+++.+ +||||+++++++.
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~---------~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~   98 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFT   98 (367)
T ss_dssp             TTEEEEEECC----CCEEEEE---------ETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEC
T ss_pred             CceEEeeEEeecCCeEEEEEE---------ECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEe
Confidence            789999999999999999997         4445668999998754 2344556788999999999 8999999999885


Q ss_pred             c-------CceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          89 K-------DELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        89 ~-------~~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      .       ...++++|++ +++|.+++..                   .|||++||+||||||+||+++.++.+||+|||
T Consensus        99 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG  177 (367)
T 2fst_X           99 PARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG  177 (367)
T ss_dssp             SCSSGGGCCCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred             cCCccccCCeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecc
Confidence            4       3378999998 6777766542                   69999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      ++......      .....+|..|+|||++.+ ..++.++|+||+||++|+|++ |..||.+.+..+.+..+.+
T Consensus       178 ~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~l~~i~~  244 (367)
T 2fst_X          178 LARHTADE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLILR  244 (367)
T ss_dssp             -------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHH
T ss_pred             cccccccc------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHH
Confidence            98754321      223466778999999886 568999999999999999999 9999999887766665544


No 186
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.9e-35  Score=244.85  Aligned_cols=194  Identities=27%  Similarity=0.456  Sum_probs=160.3

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC-------HHHHHHHHHHHHHHHhcCCCCceEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD-------AKTYDKFLKEINLMKDVGKHDHIVS   82 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~~h~ni~~   82 (228)
                      ++|++.+.||+|+||.||+|+..         .++..||||.+.....       ......+.+|+.+++++.+||||++
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~---------~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~  164 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHR---------ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT  164 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred             hhcccceEEecCCCEEEEEEEEC---------CCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            47999999999999999999853         3445799999865421       1224567889999999978999999


Q ss_pred             eeeEEEcC-ceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          83 FIGCCYKD-ELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        83 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      +++++... ..++||||+.+++|.+++..                    .|||++||+|+||||+||+++.++.++|+||
T Consensus       165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~Df  244 (365)
T 2y7j_A          165 LIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDF  244 (365)
T ss_dssp             EEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             EEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEec
Confidence            99998764 48899999999999998764                    6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN------IYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      |++..+....    ......||..|+|||++.+.      .++.++|+|||||++|+|++ |..||.+....+....+..
T Consensus       245 G~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~-g~~pf~~~~~~~~~~~i~~  319 (365)
T 2y7j_A          245 GFSCHLEPGE----KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA-GSPPFWHRRQILMLRMIME  319 (365)
T ss_dssp             TTCEECCTTC----CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHH
T ss_pred             CcccccCCCc----ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHH-CCCCCCCCCHHHHHHHHHh
Confidence            9987554322    12345778899999988632      47889999999999999999 9999999887777777766


Q ss_pred             CC
Q psy3166         216 GY  217 (228)
Q Consensus       216 ~~  217 (228)
                      +.
T Consensus       320 ~~  321 (365)
T 2y7j_A          320 GQ  321 (365)
T ss_dssp             TC
T ss_pred             CC
Confidence            53


No 187
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.5e-35  Score=240.18  Aligned_cols=194  Identities=29%  Similarity=0.548  Sum_probs=155.3

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      .+.++|++.+.||+|+||.||+|...         .++..||+|.+.....   ...+.+|+.+++++ +||||++++++
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~---------~~~~~vaiK~~~~~~~---~~~~~~e~~~l~~l-~h~~i~~~~~~   92 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHK---------ETGQIVAIKQVPVESD---LQEIIKEISIMQQC-DSPHVVKYYGS   92 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEET---------TTCCEEEEEEEETTSC---CHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEEC---------CCCCEEEEEecCchHH---HHHHHHHHHHHHhC-CCCCCccEEEE
Confidence            46788999999999999999999843         3455799999875432   24678899999999 99999999998


Q ss_pred             EEcC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          87 CYKD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        87 ~~~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      +..+ ..+++||++.+++|.+++..                     .|||++|++|+||||+||+++.++.++|+|||++
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  172 (314)
T 3com_A           93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA  172 (314)
T ss_dssp             EEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccc
Confidence            8764 47899999999999998762                     5999999999999999999999999999999998


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY  217 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~  217 (228)
                      ........   ......++..|+|||.+.+..++.++|+||||+++|+|++ |..||...........+....
T Consensus       173 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~  241 (314)
T 3com_A          173 GQLTDTMA---KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAE-GKPPYADIHPMRAIFMIPTNP  241 (314)
T ss_dssp             EECBTTBS---CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSC
T ss_pred             hhhhhhcc---ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCC
Confidence            75533211   1234567888999999998889999999999999999999 999999887766655555543


No 188
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=7.5e-36  Score=252.25  Aligned_cols=189  Identities=23%  Similarity=0.318  Sum_probs=156.3

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcC-----CCCceEEe
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG-----KHDHIVSF   83 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~ni~~~   83 (228)
                      ..+|++.+.||+|+||.||+|..         ..++..||+|.++..  ......+.+|+.+++.+.     +|+||+.+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~---------~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~  164 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYD---------HKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHM  164 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEE---------TTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCE
T ss_pred             cCcEEEEEEcccCccEEEEEEEE---------CCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEE
Confidence            45799999999999999999984         445667999998754  334456778888888762     56799999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCc--EEE
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHV--VKI  138 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~--~kl  138 (228)
                      ++.+... .++++||++. ++|.+++..                      .|||+++|+||||||+|||++.++.  +||
T Consensus       165 ~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL  243 (429)
T 3kvw_A          165 LENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV  243 (429)
T ss_dssp             EEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEE
T ss_pred             EeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEE
Confidence            9998764 4889999995 588887654                      6999999999999999999999886  999


Q ss_pred             eeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy3166         139 SDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTG  216 (228)
Q Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~  216 (228)
                      +|||++......      .....+|..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+.+..+.+.
T Consensus       244 ~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~l~~i~~~  314 (429)
T 3kvw_A          244 IDFGSSCYEHQR------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT-GYPLLPGEDEGDQLACMIEL  314 (429)
T ss_dssp             CCCTTCEETTCC------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHH
T ss_pred             eecccceecCCc------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHH
Confidence            999998643221      223567888999999999889999999999999999999 99999998888777665543


No 189
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=6.1e-36  Score=253.01  Aligned_cols=181  Identities=26%  Similarity=0.459  Sum_probs=144.5

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++.+.||+|+||+||+|+.         ..++..||+|+++... ......++.+|+.+|+++ +||||+++++++
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~---------~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~   94 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYD---------KNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLI   94 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEE---------TTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEE---------CCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEE
Confidence            47999999999999999999984         4456689999997542 344557789999999999 899999999988


Q ss_pred             EcC------ceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          88 YKD------ELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        88 ~~~------~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ...      .+++|||++. ++|.+++..                    .|||++||+||||||+|||++.++.+||+||
T Consensus        95 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DF  173 (432)
T 3n9x_A           95 IPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDF  173 (432)
T ss_dssp             CCSCTTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             ecCCCCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccC
Confidence            653      4899999985 599888764                    6999999999999999999999999999999


Q ss_pred             cCcccccccccc-------------------cCCCCCCCCcceeecccccc-cCCCCchhhHHHHHHHHHHHHhCCCCCC
Q psy3166         142 GLSEDIYEQNVF-------------------QNGEPSEKLPIRWLALESLV-SNIYTNKSDVWSFGVVLWEIVTLGANPY  201 (228)
Q Consensus       142 g~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~Pe~~~-~~~~~~~~Diwslg~~~~~l~t~g~~pf  201 (228)
                      |+++........                   ........||..|+|||++. ...++.++||||+||++|+|++ |..||
T Consensus       174 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~-g~~p~  252 (432)
T 3n9x_A          174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN-MLQSH  252 (432)
T ss_dssp             TTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHT-TCTTT
T ss_pred             CCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHh-ccccc
Confidence            999765432211                   01124567788899999864 5568999999999999999996 54443


No 190
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=5.2e-36  Score=241.50  Aligned_cols=198  Identities=25%  Similarity=0.477  Sum_probs=158.1

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      .+.++|++.+.||+|+||.||+|...         .++..||+|.+.... ......+.+|+.+++++ +||||++++++
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~---------~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~   84 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNK---------ETGALAAAKVIETKS-EEELEDYIVEIEILATC-DHPYIVKLLGA   84 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEET---------TTCCEEEEEEEC-----CCHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred             CCccceeecceeccCCCeEEEEEEEc---------CCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcC-CCCCEeeeeee
Confidence            34578999999999999999999854         344579999986542 23346788999999999 99999999999


Q ss_pred             EEcC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          87 CYKD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        87 ~~~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      +..+ ..+++||++++++|.+++..                     .|||+++++|+||||+||+++.++.++|+|||++
T Consensus        85 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  164 (302)
T 2j7t_A           85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS  164 (302)
T ss_dssp             EECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred             eeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCC
Confidence            8764 48899999999999988653                     6999999999999999999999999999999987


Q ss_pred             ccccccccccCCCCCCCCcceeecccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLV-----SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRM  219 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~  219 (228)
                      .......   .......++..|+|||.+.     ...++.++|+||||+++|+|++ |..||...+..+....+..+..+
T Consensus       165 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~  240 (302)
T 2j7t_A          165 AKNLKTL---QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ-IEPPHHELNPMRVLLKIAKSDPP  240 (302)
T ss_dssp             HHHHHHH---HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSCCC
T ss_pred             ccccccc---cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhc-CCCCCccCCHHHHHHHHhccCCc
Confidence            5332211   1112346778899999884     5568899999999999999999 99999998887777776666444


No 191
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=1.4e-35  Score=242.98  Aligned_cols=202  Identities=23%  Similarity=0.394  Sum_probs=157.2

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHH-HHhcCCCCceEEe
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINL-MKDVGKHDHIVSF   83 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~-l~~l~~h~ni~~~   83 (228)
                      +.+..++|++.+.||+|+||.||+|+.         ..++..||+|.++..........+..|..+ ++.+ +||||+++
T Consensus        46 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~-~h~~iv~~  115 (340)
T 3an0_A           46 FEVKADDLEPIMELGRGAYGVVEKMRH---------VPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV-DCPFTVTF  115 (340)
T ss_dssp             CCCCSSCEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTC-CCTTTCCE
T ss_pred             eEEehhheeEeeEecccCCEEEEEEEE---------cCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhc-CCCcEEEE
Confidence            467889999999999999999999984         345567999999766444445566667766 5556 99999999


Q ss_pred             eeEEEcC-ceEEEEecCCCCcHHHHHHH------------------------hcccCC-CCcccCCCCCCEeecCCCcEE
Q psy3166          84 IGCCYKD-ELRLVVEYCALGDLQSYLRE------------------------EYLSNN-KVVHRDLATRNILLSSPHVVK  137 (228)
Q Consensus        84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~------------------------~~lh~~-~i~H~~lk~~nil~~~~~~~k  137 (228)
                      ++++... ..++||||+.+ +|.+++..                        .|||++ +|+||||||+||+++.++.+|
T Consensus       116 ~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~k  194 (340)
T 3an0_A          116 YGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK  194 (340)
T ss_dssp             EEEEECSSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEE
T ss_pred             eeEEEeCCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEE
Confidence            9998764 58899999975 88877652                        699987 999999999999999999999


Q ss_pred             EeeccCcccccccccccCCCCCCCCcceeeccccccc----CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHH
Q psy3166         138 ISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS----NIYTNKSDVWSFGVVLWEIVTLGANPYPHI-PLCRIVHY  212 (228)
Q Consensus       138 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~----~~~~~~~Diwslg~~~~~l~t~g~~pf~~~-~~~~~~~~  212 (228)
                      |+|||++..+......    ....|+..|+|||++.+    ..++.++|+|||||++|+|++ |..||... ...+....
T Consensus       195 l~Dfg~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~t-g~~p~~~~~~~~~~~~~  269 (340)
T 3an0_A          195 MCDFGISGYLVDSVAK----TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAI-LRFPYDSWGTPFQQLKQ  269 (340)
T ss_dssp             ECCCSHHHHHSCHHHH----HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHH-TSCSSCCCSCHHHHHHH
T ss_pred             EeeCCCceeccccccc----ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHH-CCCCCccccchHHHHHH
Confidence            9999998755332111    12356778999999643    368899999999999999999 99999874 33444445


Q ss_pred             HHcCCCCCCC
Q psy3166         213 LSTGYRMERP  222 (228)
Q Consensus       213 ~~~~~~~~~p  222 (228)
                      +.....+..|
T Consensus       270 ~~~~~~~~~~  279 (340)
T 3an0_A          270 VVEEPSPQLP  279 (340)
T ss_dssp             HHHSCCCCCC
T ss_pred             HhcCCCCCCC
Confidence            4444444443


No 192
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=8e-36  Score=240.75  Aligned_cols=204  Identities=26%  Similarity=0.498  Sum_probs=162.3

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC---CHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA---DAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      ++|++.+.||+|+||.||++.         +..++..||+|.++...   .......+.+|+.+++++ +||||++++++
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~---------~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~   74 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVL---------DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDV   74 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEE---------BTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEE
T ss_pred             cceeEeeEEecCCCeEEEEEE---------ECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEE
Confidence            689999999999999999998         44455679999986432   112346788999999999 89999999998


Q ss_pred             EEc---CceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          87 CYK---DELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        87 ~~~---~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      +..   ...+++||++.++ |.+++..                      .|||+++|+|+||||+||+++.++.++|+||
T Consensus        75 ~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~df  153 (305)
T 2wtk_C           75 LYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISAL  153 (305)
T ss_dssp             EECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             EEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecc
Confidence            743   3488999999876 5555442                      6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGYRM  219 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~~~  219 (228)
                      |++......... .......++..|+|||++.+..  ++.++|+||||+++|+|++ |..||.+.+..++.+.+.++ ..
T Consensus       154 g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~i~~~-~~  230 (305)
T 2wtk_C          154 GVAEALHPFAAD-DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITT-GLYPFEGDNIYKLFENIGKG-SY  230 (305)
T ss_dssp             TTCEECCTTCSS-CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHC-CC
T ss_pred             ccccccCccccc-cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHHHhcC-CC
Confidence            998754322111 1112345788899999987643  3779999999999999999 99999998888888888777 55


Q ss_pred             CCCCCCCC
Q psy3166         220 ERPASCNE  227 (228)
Q Consensus       220 ~~p~~~~~  227 (228)
                      +.|..+++
T Consensus       231 ~~~~~~~~  238 (305)
T 2wtk_C          231 AIPGDCGP  238 (305)
T ss_dssp             CCCSSSCH
T ss_pred             CCCCccCH
Confidence            66666653


No 193
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=1.7e-35  Score=243.55  Aligned_cols=193  Identities=25%  Similarity=0.391  Sum_probs=156.3

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .++|++.+.||+|+||.||+|..         ..++..||+|.++..........+.+|+.+++++ +||||+++++++.
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~   79 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATH---------KPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQR   79 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEE---------CCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeec
Confidence            47899999999999999999984         3455679999997655566667788999999999 9999999999875


Q ss_pred             c------CceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          89 K------DELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        89 ~------~~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      .      ...+++||++. ++|.+++..                   .|||++||+||||||+||+++.++.+||+|||+
T Consensus        80 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (353)
T 2b9h_A           80 PDSFENFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL  158 (353)
T ss_dssp             CSCSTTCCCEEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred             ccccCccceEEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccc
Confidence            4      34789999996 588887654                   699999999999999999999999999999999


Q ss_pred             ccccccccccc-------CCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy3166         144 SEDIYEQNVFQ-------NGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYL  213 (228)
Q Consensus       144 ~~~~~~~~~~~-------~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~  213 (228)
                      +..+.......       .......||..|+|||++.. ..++.++|+|||||++|+|++ |..||.+.+..+....+
T Consensus       159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~  235 (353)
T 2b9h_A          159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLI  235 (353)
T ss_dssp             CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHH
T ss_pred             ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Confidence            87554321110       01223467888999998764 668999999999999999999 99999998776554443


No 194
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=5.8e-36  Score=238.19  Aligned_cols=186  Identities=28%  Similarity=0.423  Sum_probs=153.3

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||.||+|...         .++..||+|.++..........+.+|+.+++.+ +||||+++++++..
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   76 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNR---------VTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRRE   76 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEET---------TTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEEC---------CCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEc
Confidence            58999999999999999999843         345579999987554334456788999999999 99999999999876


Q ss_pred             Cc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCccccc
Q psy3166          90 DE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY  148 (228)
Q Consensus        90 ~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~~  148 (228)
                      +. .+++||++++++|.+++..                    .|||+++++|+||||+||+++.++.++|+|||.+..+.
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  156 (276)
T 2yex_A           77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR  156 (276)
T ss_dssp             TTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred             CCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence            54 7899999999898877542                    69999999999999999999999999999999987543


Q ss_pred             ccccccCCCCCCCCcceeecccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy3166         149 EQNVFQNGEPSEKLPIRWLALESLVSNIY-TNKSDVWSFGVVLWEIVTLGANPYPHIPLC  207 (228)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Diwslg~~~~~l~t~g~~pf~~~~~~  207 (228)
                      .... ........++..|+|||.+.+..+ +.++|+||||+++|+|++ |..||......
T Consensus       157 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~  214 (276)
T 2yex_A          157 YNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPWDQPSDS  214 (276)
T ss_dssp             ETTE-ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHH-SSCCCSCSCTT
T ss_pred             CCcc-hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCchH
Confidence            3221 111234567888999999987665 678999999999999999 99999886543


No 195
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=4.5e-36  Score=255.49  Aligned_cols=176  Identities=27%  Similarity=0.468  Sum_probs=132.7

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++.+.||+|+||+||+|++         ..++..||+|.+... .......++.+|+.+|+++ +||||+++++++
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  121 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYD---------KLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIV  121 (458)
T ss_dssp             CTTEEECCC-------CEEEEEE---------CC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEE---------CCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEE
Confidence            37899999999999999999984         445567999998654 2344557788999999999 999999999988


Q ss_pred             Ec------CceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          88 YK------DELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        88 ~~------~~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      ..      ..+++|||++ +++|.+++..                    .|||+++|+||||||+|||++.++.+||+||
T Consensus       122 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DF  200 (458)
T 3rp9_A          122 IPKDVEKFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDF  200 (458)
T ss_dssp             CCSCTTTCCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCC
T ss_pred             ecCCcccCceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeeccc
Confidence            43      2479999988 5688887653                    6999999999999999999999999999999


Q ss_pred             cCcccccccccc------------------------cCCCCCCCCcceeecccccc-cCCCCchhhHHHHHHHHHHHHh
Q psy3166         142 GLSEDIYEQNVF------------------------QNGEPSEKLPIRWLALESLV-SNIYTNKSDVWSFGVVLWEIVT  195 (228)
Q Consensus       142 g~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~Pe~~~-~~~~~~~~Diwslg~~~~~l~t  195 (228)
                      |+++........                        ........||..|+|||++. ...++.++|||||||++|||++
T Consensus       201 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt  279 (458)
T 3rp9_A          201 GLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN  279 (458)
T ss_dssp             TTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred             ccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence            999765322110                        01123456688899999864 5669999999999999999997


No 196
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=1.2e-35  Score=239.01  Aligned_cols=192  Identities=26%  Similarity=0.443  Sum_probs=153.7

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC-HHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD-AKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++.+.||+|+||.||+|+..         .++..||+|.++.... ......+.+|+.+++++ +||||+++++++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~   71 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNK---------LTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVI   71 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEET---------TTCCEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEc---------CCCceEEEEEeecCccchhhHHHHHHHHHHHHHc-CCCCeeeEEEEE
Confidence            479999999999999999999843         3455799999865432 22235678899999999 999999999998


Q ss_pred             EcC-ceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          88 YKD-ELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        88 ~~~-~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      ..+ ..+++||++. ++|.+++..                      .|||++|++|+||||+||+++.++.+||+|||++
T Consensus        72 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~  150 (299)
T 2r3i_A           72 HTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA  150 (299)
T ss_dssp             EETTEEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHH
T ss_pred             ecCCceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhh
Confidence            764 4789999997 588887753                      5899999999999999999999999999999988


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNI-YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      ........   ......++..|+|||.+.+.. ++.++|+||||+++|+|++ |..||.+.+..+....+.+
T Consensus       151 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~~~~~~~~  218 (299)
T 2r3i_A          151 RAFGVPVR---TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQLFRIFR  218 (299)
T ss_dssp             HHHCCCSB---CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHH
T ss_pred             hhccCCcc---ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHh-CCCCCCCccHHHHHHHHHH
Confidence            65432211   122345677899999988655 7899999999999999999 9999999887766555443


No 197
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=1.7e-35  Score=239.97  Aligned_cols=178  Identities=25%  Similarity=0.288  Sum_probs=143.2

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||+||+|+..         .++..||+|++.... ..........|+..+.++.+||||+++++++.
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~  127 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSK---------EDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE  127 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET---------TTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEEC---------CCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE
Confidence            57999999999999999999853         345579999876542 34445566777777777769999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCccc
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSED  146 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~  146 (228)
                      .+. .++|||++ +++|.+++..                     .|||+++|+||||||+|||++.++.+||+|||++..
T Consensus       128 ~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~  206 (311)
T 3p1a_A          128 EGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE  206 (311)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEE
T ss_pred             eCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeee
Confidence            654 78999999 6688887653                     699999999999999999999999999999999875


Q ss_pred             ccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3166         147 IYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPH  203 (228)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~  203 (228)
                      .....    ......||..|+|||++.+ .++.++|+|||||++|+|++ |..|+.+
T Consensus       207 ~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~~~~~  257 (311)
T 3p1a_A          207 LGTAG----AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVAC-NMELPHG  257 (311)
T ss_dssp             CC----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHH-TCCCCSS
T ss_pred             cccCC----CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHh-CCCCCCC
Confidence            53322    1223567889999998876 68999999999999999999 8655544


No 198
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.1e-35  Score=241.18  Aligned_cols=195  Identities=25%  Similarity=0.401  Sum_probs=150.1

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .++|++.+.||+|+||.||+|..         ..+++.||+|.+... .......+.+|+.+++++ +||||+++++++.
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~   78 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVD---------NDCDKRVAIKKIVLT-DPQSVKHALREIKIIRRL-DHDNIVKVFEILG   78 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEE---------TTTTEEEEEEEEECC-SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC
T ss_pred             CCceeEEEEeccCCCeEEEEEEE---------CCCCeEEEEEEEecC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEecc
Confidence            57899999999999999999984         445567999998754 345567788999999999 9999999998863


Q ss_pred             c---------------CceEEEEecCCCCcHHHHHHH-------------------hcccCCCCcccCCCCCCEeec-CC
Q psy3166          89 K---------------DELRLVVEYCALGDLQSYLRE-------------------EYLSNNKVVHRDLATRNILLS-SP  133 (228)
Q Consensus        89 ~---------------~~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~~i~H~~lk~~nil~~-~~  133 (228)
                      .               ...+++||++. ++|.+++..                   .|||++||+|+||||+||+++ .+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  157 (320)
T 2i6l_A           79 PSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED  157 (320)
T ss_dssp             TTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT
T ss_pred             ccccccccccccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence            2               34789999997 589887653                   699999999999999999997 46


Q ss_pred             CcEEEeeccCcccccccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy3166         134 HVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHY  212 (228)
Q Consensus       134 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~  212 (228)
                      +.+||+|||++.................++..|+|||.+.. ..++.++|+||||+++|+|++ |..||.+.+..+..+.
T Consensus       158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~~~  236 (320)
T 2i6l_A          158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT-GKTLFAGAHELEQMQL  236 (320)
T ss_dssp             TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHH
T ss_pred             CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHh-CCCCCCCCCHHHHHHH
Confidence            79999999998755332111112223345677999998875 568999999999999999999 9999999887777666


Q ss_pred             HHcC
Q psy3166         213 LSTG  216 (228)
Q Consensus       213 ~~~~  216 (228)
                      +...
T Consensus       237 ~~~~  240 (320)
T 2i6l_A          237 ILES  240 (320)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            5543


No 199
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=3.4e-35  Score=239.65  Aligned_cols=177  Identities=22%  Similarity=0.375  Sum_probs=148.3

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .++|++.+.||+|+||.||+|+.         ..++..||+|.++...    ...+.+|+.+++++.+||||+++++++.
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~  101 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAIN---------ITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVK  101 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE---------TTTCCEEEEEEECSCC----HHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEE---------CCCCcEEEEEEecccc----hHHHHHHHHHHHHcCCCCCEEEeeeeec
Confidence            47899999999999999999984         3445579999987432    3567899999999966999999999987


Q ss_pred             c---CceEEEEecCCCCcHHHHHHH-----------------hcccCCCCcccCCCCCCEeecCCC-cEEEeeccCcccc
Q psy3166          89 K---DELRLVVEYCALGDLQSYLRE-----------------EYLSNNKVVHRDLATRNILLSSPH-VVKISDFGLSEDI  147 (228)
Q Consensus        89 ~---~~~~lv~e~~~~~~L~~~l~~-----------------~~lh~~~i~H~~lk~~nil~~~~~-~~kl~dfg~~~~~  147 (228)
                      .   ...+++||++.+++|.+++..                 .|||++||+||||||+||+++.++ .+||+|||++...
T Consensus       102 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  181 (330)
T 3nsz_A          102 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  181 (330)
T ss_dssp             CTTTCCEEEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             cCCCCceEEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence            5   347899999999999887643                 699999999999999999999776 8999999999755


Q ss_pred             cccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3166         148 YEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPH  203 (228)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~  203 (228)
                      .....    .....++..|+|||.+.+ ..++.++|+||+||++|+|++ |..||..
T Consensus       182 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~-g~~p~~~  233 (330)
T 3nsz_A          182 HPGQE----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF-RKEPFFH  233 (330)
T ss_dssp             CTTCC----CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-TCSSSSC
T ss_pred             CCCCc----cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHh-CCCCccc
Confidence            43321    223567788999999886 568999999999999999999 9999854


No 200
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.6e-36  Score=247.30  Aligned_cols=182  Identities=32%  Similarity=0.509  Sum_probs=150.2

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      +..++|++.+.||+|+||.||+|+..+          +..||+|.+...........+.+|+.+++++ +||||++++++
T Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~   95 (326)
T 3uim_A           27 VASDNFSNKNILGRGGFGKVYKGRLAD----------GTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGF   95 (326)
T ss_dssp             TTTTSSCSTTEEECCSSSEEEEECCSS----------SCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEE
T ss_pred             HHhhccccceeEecCCCcEEEEEEecC----------CCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEE
Confidence            567899999999999999999996432          3469999987653333233678999999999 89999999999


Q ss_pred             EEcC-ceEEEEecCCCCcHHHHHHH------------------------hcccCC---CCcccCCCCCCEeecCCCcEEE
Q psy3166          87 CYKD-ELRLVVEYCALGDLQSYLRE------------------------EYLSNN---KVVHRDLATRNILLSSPHVVKI  138 (228)
Q Consensus        87 ~~~~-~~~lv~e~~~~~~L~~~l~~------------------------~~lh~~---~i~H~~lk~~nil~~~~~~~kl  138 (228)
                      +... ..+++|||+.+++|.+++..                        .|||++   +|+|+||||+||+++.++.+||
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl  175 (326)
T 3uim_A           96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV  175 (326)
T ss_dssp             ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred             EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence            8764 47899999999999998763                        589999   9999999999999999999999


Q ss_pred             eeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q psy3166         139 SDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP  202 (228)
Q Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~  202 (228)
                      +|||++.........  ......||..|+|||.+.+..++.++|+||+|+++|+|++ |..||.
T Consensus       176 ~Dfg~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~  236 (326)
T 3uim_A          176 GDFGLAKLMDYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD  236 (326)
T ss_dssp             CCCSSCEECCSSSSC--EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHH-CCCSBC
T ss_pred             ccCccccccCccccc--ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHh-CCCccc
Confidence            999998755332211  1223457889999999988889999999999999999999 999995


No 201
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=1.4e-35  Score=246.14  Aligned_cols=188  Identities=22%  Similarity=0.392  Sum_probs=153.7

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||.||+|.         +..++..||+|.++... .......+.+|+.+++++ +||||+++++++.
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~---------~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~  111 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAI---------DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFT  111 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEE---------ETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEC
T ss_pred             ccEEEEeEEecCCCeEEEEEE---------ECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhhee
Confidence            689999999999999999998         44456689999987543 344456788999999999 8999999999986


Q ss_pred             cCc-------eEEEEecCCCCcHHHHHHH------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          89 KDE-------LRLVVEYCALGDLQSYLRE------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        89 ~~~-------~~lv~e~~~~~~L~~~l~~------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      ...       .+++||++. ++|.+++..                  .|||++||+||||||+||+++.++.+||+|||+
T Consensus       112 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~  190 (371)
T 4exu_A          112 PASSLRNFYDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGL  190 (371)
T ss_dssp             SCSSSTTCCCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred             ccCCcccceeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCc
Confidence            543       389999996 577776432                  699999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      +......      .....+|..|+|||++.+ ..++.++|+|||||++|+|++ |..||.+.+..+.+..+.+
T Consensus       191 a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~  256 (371)
T 4exu_A          191 ARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT-GKTLFKGKDYLDQLTQILK  256 (371)
T ss_dssp             C--------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHH
T ss_pred             ccccccC------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Confidence            8744222      223566788999999886 678999999999999999999 9999999887777666543


No 202
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.8e-36  Score=246.05  Aligned_cols=210  Identities=25%  Similarity=0.449  Sum_probs=164.5

Q ss_pred             ccCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC-HHHHHHHHHHHHHHHhcCCCCceE
Q psy3166           3 LSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD-AKTYDKFLKEINLMKDVGKHDHIV   81 (228)
Q Consensus         3 ~~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~   81 (228)
                      -.|.++.++|++.+.||+|+||.||+|.+.+            .+|+|.++.... ....+.+.+|+.+++++ +||||+
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~------------~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv   92 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG------------EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVV   92 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEESS------------SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBC
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEcC------------eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEe
Confidence            3578999999999999999999999998532            389998864421 22224566799999999 999999


Q ss_pred             EeeeEEEcC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCCcEEEe
Q psy3166          82 SFIGCCYKD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPHVVKIS  139 (228)
Q Consensus        82 ~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~  139 (228)
                      ++++++... ..+++||++.+++|.+++..                     .|||+++|+|+||||+||+++ ++.++|+
T Consensus        93 ~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~  171 (319)
T 2y4i_B           93 LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVIT  171 (319)
T ss_dssp             CCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEEC
T ss_pred             EEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEe
Confidence            999998765 48899999999999998753                     699999999999999999998 6899999


Q ss_pred             eccCccccccccc--ccCCCCCCCCcceeeccccccc---------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy3166         140 DFGLSEDIYEQNV--FQNGEPSEKLPIRWLALESLVS---------NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCR  208 (228)
Q Consensus       140 dfg~~~~~~~~~~--~~~~~~~~~~~~~~~~Pe~~~~---------~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~  208 (228)
                      |||++........  .........|+..|+|||++..         ..++.++|+||||+++|+|++ |..||...+..+
T Consensus       172 Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~  250 (319)
T 2y4i_B          172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA-REWPFKTQPAEA  250 (319)
T ss_dssp             CCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHH-SSCSSSSCCHHH
T ss_pred             ecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Confidence            9998764422111  1112223457788999999874         347889999999999999999 999999999888


Q ss_pred             HHHHHHcCCCCCCC-CCCCC
Q psy3166         209 IVHYLSTGYRMERP-ASCNE  227 (228)
Q Consensus       209 ~~~~~~~~~~~~~p-~~~~~  227 (228)
                      +...+..+.++..+ .++|+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~  270 (319)
T 2y4i_B          251 IIWQMGTGMKPNLSQIGMGK  270 (319)
T ss_dssp             HHHHHHTTCCCCCCCSSCCT
T ss_pred             HHHHhccCCCCCCCcCCCCH
Confidence            88888888776654 35554


No 203
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=2e-35  Score=249.07  Aligned_cols=184  Identities=28%  Similarity=0.404  Sum_probs=145.6

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      .+|++.+.||+|+||+||+|++.         .++..||+|.+.....     ...+|+++|+++ +||||+++++++..
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~---------~~~~~vaiK~~~~~~~-----~~~~E~~il~~l-~hpniv~l~~~~~~  118 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLC---------DSGELVAIKKVLQDKR-----FKNRELQIMRKL-DHCNIVRLRYFFYS  118 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEET---------TTCCEEEEEEEECCTT-----SCCHHHHHHHTC-CCTTBCCEEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEEC---------CCCcEEEEEEecccch-----hHHHHHHHHHHc-CCCCccceeeEEec
Confidence            36999999999999999999853         3455799999865422     123699999999 99999999998753


Q ss_pred             -----Cc--eEEEEecCCCCcHHHHHHH------------------------hcccCCCCcccCCCCCCEeecCC-CcEE
Q psy3166          90 -----DE--LRLVVEYCALGDLQSYLRE------------------------EYLSNNKVVHRDLATRNILLSSP-HVVK  137 (228)
Q Consensus        90 -----~~--~~lv~e~~~~~~L~~~l~~------------------------~~lh~~~i~H~~lk~~nil~~~~-~~~k  137 (228)
                           +.  +++||||+++ ++.+.+..                        .|||+++|+||||||+|||++.+ +.+|
T Consensus       119 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~k  197 (420)
T 1j1b_A          119 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK  197 (420)
T ss_dssp             EETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEE
T ss_pred             cCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEE
Confidence                 11  5689999976 55544321                        69999999999999999999965 6789


Q ss_pred             EeeccCcccccccccccCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy3166         138 ISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS  214 (228)
Q Consensus       138 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~  214 (228)
                      |+|||+++.+....    ......+|..|+|||++.+. .++.++|||||||++|+|++ |..||.+.+..+.+..+.
T Consensus       198 l~DFG~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~-G~~pf~~~~~~~~l~~i~  270 (420)
T 1j1b_A          198 LCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEII  270 (420)
T ss_dssp             ECCCTTCEECCTTC----CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHH
T ss_pred             eccchhhhhcccCC----CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Confidence            99999997553321    12234667889999998764 68999999999999999999 999999987766555443


No 204
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=3.1e-36  Score=247.72  Aligned_cols=188  Identities=22%  Similarity=0.284  Sum_probs=144.9

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHH----------HHHHHHHHHHHHhcCC
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKT----------YDKFLKEINLMKDVGK   76 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~e~~~l~~l~~   76 (228)
                      +..++|++.+.||+|+||.||+|.....      ..++..+|+|..........          ...+.+|+..++.+ +
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~------~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~  106 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNK------PEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-D  106 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSS------CGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-S
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCC------CCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-c
Confidence            4567899999999999999999986542      23556799999875532211          12355788888999 9


Q ss_pred             CCceEEeeeEEEc----C-ceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeec
Q psy3166          77 HDHIVSFIGCCYK----D-ELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLS  131 (228)
Q Consensus        77 h~ni~~~~~~~~~----~-~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~  131 (228)
                      ||||+++++++..    . ..+++||++ +++|.+++..                    .|||+++|+||||||+||+++
T Consensus       107 h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  185 (345)
T 2v62_A          107 YLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLG  185 (345)
T ss_dssp             CCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             ccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEc
Confidence            9999999998765    2 378999999 9999998653                    699999999999999999999


Q ss_pred             CCC--cEEEeeccCccccccccccc----CCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3166         132 SPH--VVKISDFGLSEDIYEQNVFQ----NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPH  203 (228)
Q Consensus       132 ~~~--~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~  203 (228)
                      .++  .+||+|||+++.+.......    .......|+..|+|||++.+..++.++|+|||||++|+|++ |..||.+
T Consensus       186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~-g~~pf~~  262 (345)
T 2v62_A          186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLC-GKLPWEQ  262 (345)
T ss_dssp             SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH-SSCTTGG
T ss_pred             cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh-CCCCccc
Confidence            877  99999999997654332111    11134567889999999998889999999999999999999 9999965


No 205
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1.4e-36  Score=248.93  Aligned_cols=181  Identities=27%  Similarity=0.455  Sum_probs=149.5

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH-------HHHHHHHHHHHHHHhcCCCCceE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-------KTYDKFLKEINLMKDVGKHDHIV   81 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l~~h~ni~   81 (228)
                      .++|++.+.||+|+||.||+|+         +..++..||+|.++.....       .....+.+|+.+++++ +||||+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~---------~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv   92 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAV---------DKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANII   92 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEE---------ETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBC
T ss_pred             ccceEEEeEEEecCCEEEEEEE---------ECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEe
Confidence            3689999999999999999998         4445667999998754211       1223466799999999 999999


Q ss_pred             EeeeEEEcCc-eEEEEecCCCC-cHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEe
Q psy3166          82 SFIGCCYKDE-LRLVVEYCALG-DLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKIS  139 (228)
Q Consensus        82 ~~~~~~~~~~-~~lv~e~~~~~-~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~  139 (228)
                      ++++++.... .+++||++.+| +|.+++..                    .|||+++|+||||||+||+++.++.+||+
T Consensus        93 ~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~  172 (335)
T 3dls_A           93 KVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLI  172 (335)
T ss_dssp             CEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEEC
T ss_pred             eEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEe
Confidence            9999987755 78999998666 99988764                    69999999999999999999999999999


Q ss_pred             eccCcccccccccccCCCCCCCCcceeecccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3166         140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIY-TNKSDVWSFGVVLWEIVTLGANPYPHI  204 (228)
Q Consensus       140 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Diwslg~~~~~l~t~g~~pf~~~  204 (228)
                      |||++..+.....    .....||..|+|||++.+..+ +.++|+|||||++|+|++ |..||...
T Consensus       173 Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~  233 (335)
T 3dls_A          173 DFGSAAYLERGKL----FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF-EENPFCEL  233 (335)
T ss_dssp             CCTTCEECCTTCC----BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH-SSCSCSSG
T ss_pred             ecccceECCCCCc----eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHh-CCCchhhH
Confidence            9999876543321    123457889999999987776 788999999999999999 99999763


No 206
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=9.9e-36  Score=239.03  Aligned_cols=204  Identities=27%  Similarity=0.438  Sum_probs=156.6

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .++|.....||+|+||.||+|...         .++..||+|.+..... ...+.+.+|+.+++.+ +||||+++++++.
T Consensus        21 ~~~~~~~~~lg~G~~g~Vy~~~~~---------~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~   89 (295)
T 2clq_A           21 YDENGDRVVLGKGTYGIVYAGRDL---------SNQVRIAIKEIPERDS-RYSQPLHEEIALHKHL-KHKNIVQYLGSFS   89 (295)
T ss_dssp             BCTTSSBCEEEECSSSEEEEEEET---------TTCCEEEEEEEECCCC----HHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred             ccCCCCcEEEeecCcEEEEEEEEC---------CCCeEEEEEEccCCch-HHHHHHHHHHHHHHhC-CCCCEeeEeeEEE
Confidence            334444559999999999999843         3455799999875532 3346788999999999 9999999999987


Q ss_pred             cCc-eEEEEecCCCCcHHHHHHH-----------------------hcccCCCCcccCCCCCCEeecC-CCcEEEeeccC
Q psy3166          89 KDE-LRLVVEYCALGDLQSYLRE-----------------------EYLSNNKVVHRDLATRNILLSS-PHVVKISDFGL  143 (228)
Q Consensus        89 ~~~-~~lv~e~~~~~~L~~~l~~-----------------------~~lh~~~i~H~~lk~~nil~~~-~~~~kl~dfg~  143 (228)
                      ... .+++||++++++|.+++..                       .|||+++|+|+||||+||+++. ++.++|+|||+
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~  169 (295)
T 2clq_A           90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGT  169 (295)
T ss_dssp             ETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTT
T ss_pred             eCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeeccc
Confidence            654 7899999999999988753                       5899999999999999999997 89999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcCCCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI--YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRI--VHYLSTGYRM  219 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~--~~~~~~~~~~  219 (228)
                      +........   ......++..|+|||++....  ++.++|+||||+++|+|++ |..||........  ........++
T Consensus       170 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~  245 (295)
T 2clq_A          170 SKRLAGINP---CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT-GKPPFYELGEPQAAMFKVGMFKVHP  245 (295)
T ss_dssp             CEESCC--------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHH-TSCTTGGGSSHHHHHHHHHHHCCCC
T ss_pred             ccccCCCCC---cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHH-CCCCccCCCchhHHHHhhccccccc
Confidence            875433211   122356788899999987643  7889999999999999999 9999976543322  2233345566


Q ss_pred             CCCCCCCC
Q psy3166         220 ERPASCNE  227 (228)
Q Consensus       220 ~~p~~~~~  227 (228)
                      +.|..+|+
T Consensus       246 ~~~~~~~~  253 (295)
T 2clq_A          246 EIPESMSA  253 (295)
T ss_dssp             CCCTTSCH
T ss_pred             cccccCCH
Confidence            66766653


No 207
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=2.1e-35  Score=240.79  Aligned_cols=186  Identities=27%  Similarity=0.498  Sum_probs=134.9

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHH-HHHhcCCCCceEE
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEIN-LMKDVGKHDHIVS   82 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~-~l~~l~~h~ni~~   82 (228)
                      .|.++.++|++.+.||+|+||.||+|..         ..++..||+|.++.........++..|+. +++.+ +||||++
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~-~h~niv~   85 (327)
T 3aln_A           16 HWDFTAEDLKDLGEIGRGAYGSVNKMVH---------KPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS-DCPYIVQ   85 (327)
T ss_dssp             EECCCSCSEEC-CEEEECSSEEEEEEEE---------TTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSC-CCTTBCC
T ss_pred             hcccCHHHhhehheeccCCCEEEEEEEE---------cCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcC-CCCcEee
Confidence            4678899999999999999999999984         34556799999987655555566677777 55555 9999999


Q ss_pred             eeeEEEcCc-eEEEEecCCCCcHHHHHHH-------------------------hcccCC-CCcccCCCCCCEeecCCCc
Q psy3166          83 FIGCCYKDE-LRLVVEYCALGDLQSYLRE-------------------------EYLSNN-KVVHRDLATRNILLSSPHV  135 (228)
Q Consensus        83 ~~~~~~~~~-~~lv~e~~~~~~L~~~l~~-------------------------~~lh~~-~i~H~~lk~~nil~~~~~~  135 (228)
                      +++++.... .+++||++.+ +|.+++..                         .|||++ +|+|+||||+||+++.++.
T Consensus        86 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~  164 (327)
T 3aln_A           86 FYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN  164 (327)
T ss_dssp             EEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTE
T ss_pred             eeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCC
Confidence            999987654 7899999975 77666541                         589999 9999999999999999999


Q ss_pred             EEEeeccCcccccccccccCCCCCCCCcceeeccccc----ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q psy3166         136 VKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL----VSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP  205 (228)
Q Consensus       136 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~----~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~  205 (228)
                      +||+|||++..+.....    .....++..|+|||++    ....++.++|+||||+++|+|++ |..||.+..
T Consensus       165 ~kl~Dfg~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~  233 (327)
T 3aln_A          165 IKLCDFGISGQLVDSIA----KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELAT-GRFPYPKWN  233 (327)
T ss_dssp             EEECCCSSSCC----------------------------------CCSHHHHHHHHHHHHHHHH-SCCCSSCC-
T ss_pred             EEEccCCCceecccccc----cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHH-CCCCCCCcc
Confidence            99999999875533221    1223577889999998    35568899999999999999999 999998754


No 208
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=2.2e-35  Score=240.94  Aligned_cols=190  Identities=25%  Similarity=0.428  Sum_probs=136.0

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      .+...+|++.+.||+|+||.||+|.+         ..++..||+|.+... .......+.+|+.+++++.+||||+++++
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~   93 (337)
T 3ll6_A           24 ELGELRLRVRRVLAEGGFAFVYEAQD---------VGSGREYALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCS   93 (337)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEEE---------TTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEE
T ss_pred             eccCceEEEEEEEccCCceEEEEEEE---------CCCCcEEEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhccc
Confidence            35567899999999999999999984         334557999988654 34445678899999999956999999999


Q ss_pred             EEEc-------C--ceEEEEecCCCCcHHHHHHH-----------------------hcccCCC--CcccCCCCCCEeec
Q psy3166          86 CCYK-------D--ELRLVVEYCALGDLQSYLRE-----------------------EYLSNNK--VVHRDLATRNILLS  131 (228)
Q Consensus        86 ~~~~-------~--~~~lv~e~~~~~~L~~~l~~-----------------------~~lh~~~--i~H~~lk~~nil~~  131 (228)
                      ++..       .  .++++||++. |+|.+++..                       .|||+++  |+|+||||+||+++
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~  172 (337)
T 3ll6_A           94 AASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS  172 (337)
T ss_dssp             EEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEEC
T ss_pred             cccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEEC
Confidence            8842       1  2689999995 688887653                       6999999  99999999999999


Q ss_pred             CCCcEEEeeccCccccccccccc---------CCCCCCCCcceeeccccc---ccCCCCchhhHHHHHHHHHHHHhCCCC
Q psy3166         132 SPHVVKISDFGLSEDIYEQNVFQ---------NGEPSEKLPIRWLALESL---VSNIYTNKSDVWSFGVVLWEIVTLGAN  199 (228)
Q Consensus       132 ~~~~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~Pe~~---~~~~~~~~~Diwslg~~~~~l~t~g~~  199 (228)
                      .++.+||+|||++..........         .......++..|+|||++   ....++.++|+||||+++|+|++ |..
T Consensus       173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~  251 (337)
T 3ll6_A          173 NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF-RQH  251 (337)
T ss_dssp             TTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHH-SSC
T ss_pred             CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHh-CCC
Confidence            99999999999987654332111         011134578889999998   45568899999999999999999 999


Q ss_pred             CCCCCCHH
Q psy3166         200 PYPHIPLC  207 (228)
Q Consensus       200 pf~~~~~~  207 (228)
                      ||......
T Consensus       252 p~~~~~~~  259 (337)
T 3ll6_A          252 PFEDGAKL  259 (337)
T ss_dssp             CC------
T ss_pred             CCcchhHH
Confidence            99875443


No 209
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.7e-35  Score=242.06  Aligned_cols=183  Identities=33%  Similarity=0.514  Sum_probs=140.0

Q ss_pred             CccCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHH--HHhcCCCCc
Q psy3166           2 ALSCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINL--MKDVGKHDH   79 (228)
Q Consensus         2 ~~~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~--l~~l~~h~n   79 (228)
                      +..++++.++|++.+.||+|+||.||+|+.           ++..||+|.++...    ...+..|.++  +..+ +|||
T Consensus         5 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-----------~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~-~h~~   68 (336)
T 3g2f_A            5 ASEPSLDLDNLKLLELIGRGRYGAVYKGSL-----------DERPVAVKVFSFAN----RQNFINEKNIYRVPLM-EHDN   68 (336)
T ss_dssp             ----CCCTTSEEEEEEEEECSSEEEEEEEE-----------TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTC-CCTT
T ss_pred             ccCCCcChHHhheeeecccCCCeEEEEEEE-----------CCeEEEEEEeeccc----hhhHHHHHHHHHHHhc-cCcc
Confidence            345689999999999999999999999974           23469999986442    2233344444  4446 9999


Q ss_pred             eEEeeeEEEc----C--ceEEEEecCCCCcHHHHHHH-------------------hcccCC---------CCcccCCCC
Q psy3166          80 IVSFIGCCYK----D--ELRLVVEYCALGDLQSYLRE-------------------EYLSNN---------KVVHRDLAT  125 (228)
Q Consensus        80 i~~~~~~~~~----~--~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~---------~i~H~~lk~  125 (228)
                      |+++++.+..    +  .+++||||+++|+|.+++..                   .|||++         +|+||||||
T Consensus        69 i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp  148 (336)
T 3g2f_A           69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS  148 (336)
T ss_dssp             BCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSG
T ss_pred             hhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeeccccc
Confidence            9999975432    1  36899999999999999864                   699999         999999999


Q ss_pred             CCEeecCCCcEEEeeccCcccccccccc-----cCCCCCCCCcceeeccccccc-------CCCCchhhHHHHHHHHHHH
Q psy3166         126 RNILLSSPHVVKISDFGLSEDIYEQNVF-----QNGEPSEKLPIRWLALESLVS-------NIYTNKSDVWSFGVVLWEI  193 (228)
Q Consensus       126 ~nil~~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~~Pe~~~~-------~~~~~~~Diwslg~~~~~l  193 (228)
                      +|||++.++.+||+|||++..+......     ........||..|+|||++.+       ..++.++|||||||++|+|
T Consensus       149 ~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~el  228 (336)
T 3g2f_A          149 RNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI  228 (336)
T ss_dssp             GGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHH
Confidence            9999999999999999999765432211     112224568899999999876       3456789999999999999


Q ss_pred             HhCCCCCC
Q psy3166         194 VTLGANPY  201 (228)
Q Consensus       194 ~t~g~~pf  201 (228)
                      ++ |..||
T Consensus       229 l~-g~~p~  235 (336)
T 3g2f_A          229 FM-RCTDL  235 (336)
T ss_dssp             HT-TBGGG
T ss_pred             Hh-cCCcC
Confidence            99 86554


No 210
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=2.9e-36  Score=245.48  Aligned_cols=193  Identities=27%  Similarity=0.447  Sum_probs=151.5

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC-------HHHHHHHHHHHHHHHhcCCCCceE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD-------AKTYDKFLKEINLMKDVGKHDHIV   81 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~~h~ni~   81 (228)
                      .++|++.+.||+|+||.||+|..         ..++..||+|.+.....       ......+.+|+++++++ +||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~   78 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFE---------RKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCII   78 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBC
T ss_pred             hhceeEeeEEecCCCEEEEEEEE---------cCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCc
Confidence            36899999999999999999984         44556799999864321       11223577899999999 999999


Q ss_pred             EeeeEEEcCceEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCC---cEEE
Q psy3166          82 SFIGCCYKDELRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPH---VVKI  138 (228)
Q Consensus        82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~---~~kl  138 (228)
                      ++++++.....++|||++++++|.+++..                    .|||+++|+|+||||+||+++.++   .+||
T Consensus        79 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl  158 (322)
T 2ycf_A           79 KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI  158 (322)
T ss_dssp             CEEEEEESSSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEE
T ss_pred             eEeeEEcCCceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEE
Confidence            99999988889999999999999887643                    699999999999999999998765   4999


Q ss_pred             eeccCcccccccccccCCCCCCCCcceeecccccc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHH
Q psy3166         139 SDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLV---SNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC-RIVHYLS  214 (228)
Q Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~-~~~~~~~  214 (228)
                      +|||++.........    ....++..|+|||++.   ...++.++|+|||||++|+|++ |..||...... .+...+.
T Consensus       159 ~Dfg~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~  233 (322)
T 2ycf_A          159 TDFGHSKILGETSLM----RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS-GYPPFSEHRTQVSLKDQIT  233 (322)
T ss_dssp             CCCTTCEECCCCHHH----HHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHH-SSCSSCSTTCSSCHHHHHH
T ss_pred             ccCccceeccccccc----ccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHh-CCCCCcccchHHHHHHHHH
Confidence            999998755332211    1134567899999874   4568899999999999999999 99999875433 3444455


Q ss_pred             cC
Q psy3166         215 TG  216 (228)
Q Consensus       215 ~~  216 (228)
                      .+
T Consensus       234 ~~  235 (322)
T 2ycf_A          234 SG  235 (322)
T ss_dssp             HT
T ss_pred             hC
Confidence            44


No 211
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=3.6e-36  Score=244.83  Aligned_cols=186  Identities=32%  Similarity=0.495  Sum_probs=152.1

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      ...++|++.+.||+|+||.||+|++++          +..||+|.+..... ...+.+.+|+.+++++ +||||++++++
T Consensus        36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~  103 (321)
T 2qkw_B           36 EATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESS-QGIEEFETEIETLSFC-RHPHLVSLIGF  103 (321)
T ss_dssp             CCCCCCSCCCCSCBCSSSEEEEEECTT----------CCEEEEEECCSCCS-SHHHHHHHHHHGGGSC-CCTTBCCEEEE
T ss_pred             HHHhccCccceeecCCCeeEEEEEECC----------CCEEEEEEecccCh-HHHHHHHHHHHHHHhC-CCCCEeeEEEE
Confidence            345789999999999999999998432          34699998875532 3456788999999999 99999999999


Q ss_pred             EEcC-ceEEEEecCCCCcHHHHHHH------------------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          87 CYKD-ELRLVVEYCALGDLQSYLRE------------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        87 ~~~~-~~~lv~e~~~~~~L~~~l~~------------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      +... ..++||||+++++|.+++..                        .|||+++|+|+||||+||+++.++.+||+||
T Consensus       104 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Df  183 (321)
T 2qkw_B          104 CDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDF  183 (321)
T ss_dssp             CCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred             EcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeec
Confidence            8664 48899999999999876521                        6999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      |++........ ........|+..|+|||++.+..++.++|+||||+++|+|++ |..||.+..+
T Consensus       184 g~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~-g~~p~~~~~~  246 (321)
T 2qkw_B          184 GISKKGTELDQ-THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC-ARSAIVQSLP  246 (321)
T ss_dssp             TTCEECSSSSC-CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHH-CCTTCSCSSS
T ss_pred             ccccccccccc-cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHh-CCCcccccCc
Confidence            99875432211 111223456788999999988889999999999999999999 9999976543


No 212
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=9.4e-35  Score=242.00  Aligned_cols=188  Identities=27%  Similarity=0.362  Sum_probs=153.9

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCC-----ceEEe
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHD-----HIVSF   83 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~-----ni~~~   83 (228)
                      .++|++.+.||+|+||+||+|+.         ..++..||+|.++..  ......+..|+.+++.+.+|+     +++.+
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  121 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYD---------RVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHL  121 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEE---------TTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEE---------cCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEe
Confidence            36899999999999999999984         445567999998743  334456778888888885465     49999


Q ss_pred             eeEEEc-CceEEEEecCCCCcHHHHHHH----------------------hccc--CCCCcccCCCCCCEeec--CCCcE
Q psy3166          84 IGCCYK-DELRLVVEYCALGDLQSYLRE----------------------EYLS--NNKVVHRDLATRNILLS--SPHVV  136 (228)
Q Consensus        84 ~~~~~~-~~~~lv~e~~~~~~L~~~l~~----------------------~~lh--~~~i~H~~lk~~nil~~--~~~~~  136 (228)
                      .+++.. +..++|||++. ++|.+++..                      .|||  +.+|+||||||+|||+.  .++.+
T Consensus       122 ~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~  200 (382)
T 2vx3_A          122 KRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAI  200 (382)
T ss_dssp             EEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCE
T ss_pred             eeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcE
Confidence            988766 45889999995 599888754                      5788  57999999999999995  47789


Q ss_pred             EEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         137 KISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       137 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      ||+|||++......      .....+|..|+|||++.+..++.++|+|||||++|+|++ |..||.+.+..+.+..+..
T Consensus       201 kL~DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~  272 (382)
T 2vx3_A          201 KIVDFGSSCQLGQR------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT-GEPLFSGANEVDQMNKIVE  272 (382)
T ss_dssp             EECCCTTCEETTCC------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHH
T ss_pred             EEEeccCceecccc------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHH
Confidence            99999998754322      234567888999999998889999999999999999999 9999999888877776655


No 213
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=4.4e-36  Score=243.64  Aligned_cols=209  Identities=19%  Similarity=0.280  Sum_probs=156.0

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      .++.++|++.+.||+|+||.||++..         ..++..||+|.+... .......+.+|+.+++++ +||||+++++
T Consensus        25 ~i~~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~   93 (317)
T 2buj_A           25 IIDNKHYLFIQKLGEGGFSYVDLVEG---------LHDGHFYALKRILCH-EQQDREEAQREADMHRLF-NHPNILRLVA   93 (317)
T ss_dssp             EETTEEEEEEEEEEC--CEEEEEEEE---------TTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHTC-CCTTBCCCCE
T ss_pred             EECCeEEEEEEEecCCCCeEEEEEEe---------cCCCcEEEEEEEecC-CHHHHHHHHHHHHHHhhc-CCCCeeeEEE
Confidence            46778999999999999999999984         344567999988654 344567788999999999 9999999999


Q ss_pred             EEEc-----CceEEEEecCCCCcHHHHHHH------------------------hcccCCCCcccCCCCCCEeecCCCcE
Q psy3166          86 CCYK-----DELRLVVEYCALGDLQSYLRE------------------------EYLSNNKVVHRDLATRNILLSSPHVV  136 (228)
Q Consensus        86 ~~~~-----~~~~lv~e~~~~~~L~~~l~~------------------------~~lh~~~i~H~~lk~~nil~~~~~~~  136 (228)
                      ++..     ...+++||++.+++|.+++..                        .|||+++|+|+||||+||+++.++.+
T Consensus        94 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~  173 (317)
T 2buj_A           94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQP  173 (317)
T ss_dssp             EEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCE
T ss_pred             EEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCE
Confidence            8752     247899999999999988753                        59999999999999999999999999


Q ss_pred             EEeeccCccccccccccc------CCCCCCCCcceeecccccccCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCC--
Q psy3166         137 KISDFGLSEDIYEQNVFQ------NGEPSEKLPIRWLALESLVSNI---YTNKSDVWSFGVVLWEIVTLGANPYPHIP--  205 (228)
Q Consensus       137 kl~dfg~~~~~~~~~~~~------~~~~~~~~~~~~~~Pe~~~~~~---~~~~~Diwslg~~~~~l~t~g~~pf~~~~--  205 (228)
                      +|+|||++..........      .......++..|+|||.+....   ++.++|+||||+++|+|++ |..||....  
T Consensus       174 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~  252 (317)
T 2buj_A          174 VLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF-GEGPYDMVFQK  252 (317)
T ss_dssp             EECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHH-SSCTTHHHHHT
T ss_pred             EEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHh-CCCChhhhhcc
Confidence            999999876432211000      0001123467899999987543   6889999999999999999 999996421  


Q ss_pred             HHHHHHHHHcCCCCCCCCCCC
Q psy3166         206 LCRIVHYLSTGYRMERPASCN  226 (228)
Q Consensus       206 ~~~~~~~~~~~~~~~~p~~~~  226 (228)
                      ...+...+....+.+.+..+|
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~  273 (317)
T 2buj_A          253 GDSVALAVQNQLSIPQSPRHS  273 (317)
T ss_dssp             TSCHHHHHHCC--CCCCTTSC
T ss_pred             cchhhHHhhccCCCCccccCC
Confidence            122333344444444444444


No 214
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=8.1e-36  Score=247.47  Aligned_cols=185  Identities=14%  Similarity=0.176  Sum_probs=139.9

Q ss_pred             cCCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC--HHHHHHHHHHHHHHHhcC-CCCce
Q psy3166           4 SCGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD--AKTYDKFLKEINLMKDVG-KHDHI   80 (228)
Q Consensus         4 ~~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-~h~ni   80 (228)
                      .++.+..+|++.+.||+|+||+||+|.+         ..++..||+|.++....  ......+.+|+.+++.+. +||||
T Consensus        56 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~i  126 (371)
T 3q60_A           56 LLSQGERKLKLVEPLRVGDRSVVFLVRD---------VERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEE  126 (371)
T ss_dssp             TTTCCEEEEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----
T ss_pred             cCCCCceeeeeeeeccCCCCEEEEEEEE---------CCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhh
Confidence            3566777899999999999999999984         34556799999986542  334556778876666663 59998


Q ss_pred             EEee-------eEEEc------------------CceEEEEecCCCCcHHHHHHH-------------------------
Q psy3166          81 VSFI-------GCCYK------------------DELRLVVEYCALGDLQSYLRE-------------------------  110 (228)
Q Consensus        81 ~~~~-------~~~~~------------------~~~~lv~e~~~~~~L~~~l~~-------------------------  110 (228)
                      ++++       +++..                  ..+++||||+. ++|.+++..                         
T Consensus       127 v~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~  205 (371)
T 3q60_A          127 ARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIR  205 (371)
T ss_dssp             -----CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred             hhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHH
Confidence            8855       33321                  22789999998 799988753                         


Q ss_pred             --hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeeccccccc--CCCCchhhHHHH
Q psy3166         111 --EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS--NIYTNKSDVWSF  186 (228)
Q Consensus       111 --~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--~~~~~~~Diwsl  186 (228)
                        .|||+++|+||||||+|||++.++.+||+|||++........      ...++..|+|||++.+  ..++.++|+|||
T Consensus       206 aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~~~DiwSl  279 (371)
T 3q60_A          206 LAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP------ASSVPVTYAPREFLNASTATFTHALNAWQL  279 (371)
T ss_dssp             HHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE------GGGSCGGGCCHHHHTCSEEECCHHHHHHHH
T ss_pred             HHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc------CccCCcCCcChhhccCCCCCcCccccHHHH
Confidence              589999999999999999999999999999999875432211      2344578999999987  678999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCC
Q psy3166         187 GVVLWEIVTLGANPYPHIP  205 (228)
Q Consensus       187 g~~~~~l~t~g~~pf~~~~  205 (228)
                      ||++|+|++ |..||.+..
T Consensus       280 G~il~ellt-g~~Pf~~~~  297 (371)
T 3q60_A          280 GLSIYRVWC-LFLPFGLVT  297 (371)
T ss_dssp             HHHHHHHHH-SSCSTTBCC
T ss_pred             HHHHHHHHh-CCCCCCCcC
Confidence            999999999 999998763


No 215
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=6.2e-35  Score=235.02  Aligned_cols=182  Identities=27%  Similarity=0.497  Sum_probs=145.8

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHh--cCCCCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKD--VGKHDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~~h~ni~~~   83 (228)
                      .+-.++|++.+.||+|+||.||+|++           ++..||+|.+...    ....+.+|.+++..  + +||||+++
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~-----------~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l-~h~niv~~   67 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSW-----------QGENVAVKIFSSR----DEKSWFRETELYNTVML-RHENILGF   67 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEE-----------TTEEEEEEEECGG----GHHHHHHHHHHHHHTCC-CCTTBCCE
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEE-----------CCEEEEEEEeccc----cchhhHHHHHHHHHhhc-cCcCeeeE
Confidence            34568999999999999999999975           2346999998643    22445567777666  6 89999999


Q ss_pred             eeEEEc-----CceEEEEecCCCCcHHHHHHH-------------------hccc--------CCCCcccCCCCCCEeec
Q psy3166          84 IGCCYK-----DELRLVVEYCALGDLQSYLRE-------------------EYLS--------NNKVVHRDLATRNILLS  131 (228)
Q Consensus        84 ~~~~~~-----~~~~lv~e~~~~~~L~~~l~~-------------------~~lh--------~~~i~H~~lk~~nil~~  131 (228)
                      ++++..     ...+++|||+++|+|.+++..                   .|||        +++|+||||||+||+++
T Consensus        68 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~  147 (301)
T 3q4u_A           68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK  147 (301)
T ss_dssp             EEEEEEEETTEEEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEEC
T ss_pred             EEeeccccCCCceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEc
Confidence            988643     237899999999999998764                   6999        99999999999999999


Q ss_pred             CCCcEEEeeccCcccccccccc-cCCCCCCCCcceeecccccccC------CCCchhhHHHHHHHHHHHHhCC-------
Q psy3166         132 SPHVVKISDFGLSEDIYEQNVF-QNGEPSEKLPIRWLALESLVSN------IYTNKSDVWSFGVVLWEIVTLG-------  197 (228)
Q Consensus       132 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Diwslg~~~~~l~t~g-------  197 (228)
                      .++.+||+|||++......... ........||..|+|||++.+.      .++.++|+|||||++|+|++ |       
T Consensus       148 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~t-g~~~~~~~  226 (301)
T 3q4u_A          148 KNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR-RMVSNGIV  226 (301)
T ss_dssp             TTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT-TBCBTTBC
T ss_pred             CCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHh-hhcCcccc
Confidence            9999999999998755443221 1223345788999999999866      34468999999999999999 9       


Q ss_pred             ---CCCCCCC
Q psy3166         198 ---ANPYPHI  204 (228)
Q Consensus       198 ---~~pf~~~  204 (228)
                         ..||...
T Consensus       227 ~~~~~pf~~~  236 (301)
T 3q4u_A          227 EDYKPPFYDV  236 (301)
T ss_dssp             CCCCCTTTTT
T ss_pred             cccccccccc
Confidence               8888653


No 216
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=4.5e-35  Score=244.97  Aligned_cols=185  Identities=26%  Similarity=0.402  Sum_probs=145.1

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      .+|++.+.||+|+||+||+|+...         ++ .+|+|++......     ..+|+++++.+ +||||+++++++..
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~---------~~-~~aikk~~~~~~~-----~~~E~~il~~l-~h~niv~l~~~~~~  103 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVE---------SD-EVAIKKVLQDKRF-----KNRELQIMRIV-KHPNVVDLKAFFYS  103 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETT---------TE-EEEEEEEECCTTS-----CCHHHHHHHTC-CCTTBCCEEEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECC---------CC-eEEEEEEecCcch-----HHHHHHHHHhC-CCCCcceEEEEEEe
Confidence            479999999999999999998533         22 3888887543221     13699999999 99999999998854


Q ss_pred             Cc-------eEEEEecCCCCcHHHHHH------------------H-----hcccCCCCcccCCCCCCEeec-CCCcEEE
Q psy3166          90 DE-------LRLVVEYCALGDLQSYLR------------------E-----EYLSNNKVVHRDLATRNILLS-SPHVVKI  138 (228)
Q Consensus        90 ~~-------~~lv~e~~~~~~L~~~l~------------------~-----~~lh~~~i~H~~lk~~nil~~-~~~~~kl  138 (228)
                      ..       +++||||++++.+.....                  +     .|||++||+||||||+|||++ .++.+||
T Consensus       104 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL  183 (394)
T 4e7w_A          104 NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKL  183 (394)
T ss_dssp             ESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEE
T ss_pred             cCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEE
Confidence            21       679999997753332211                  0     699999999999999999999 7899999


Q ss_pred             eeccCcccccccccccCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         139 SDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       139 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      +|||+++.+....    ......+|..|+|||++.+. .++.++||||+||++|+|++ |..||.+.+..+.+..+.+
T Consensus       184 ~DFG~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~l~~i~~  256 (394)
T 4e7w_A          184 IDFGSAKILIAGE----PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQ-GQPLFPGESGIDQLVEIIK  256 (394)
T ss_dssp             CCCTTCEECCTTC----CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHH
T ss_pred             eeCCCcccccCCC----CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHH
Confidence            9999997553322    12235668889999998765 58999999999999999999 9999999887766555443


No 217
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=2.4e-34  Score=234.86  Aligned_cols=188  Identities=23%  Similarity=0.353  Sum_probs=154.9

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCC------ceEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHD------HIVS   82 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~------ni~~   82 (228)
                      .++|++.+.||+|+||.||+|...        ...+..||+|.++..  ......+.+|+.+++.+ +|+      ++++
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~--------~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~   81 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDH--------KAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHL-NTTDPNSTFRCVQ   81 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET--------TTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHH-HHHCTTCTTCBCC
T ss_pred             cCceEEEEEEecCCCeEEEEEEec--------CCCCcEEEEEEEecC--CchhHHHHHHHHHHHHh-hhcCCCCceeeEe
Confidence            479999999999999999999742        234567999998643  34456778899999888 554      5999


Q ss_pred             eeeEEEcC-ceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecC-------
Q psy3166          83 FIGCCYKD-ELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSS-------  132 (228)
Q Consensus        83 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~-------  132 (228)
                      +++++... ..++|||++ +++|.+++..                      .|||+++|+||||||+||+++.       
T Consensus        82 ~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~  160 (339)
T 1z57_A           82 MLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAY  160 (339)
T ss_dssp             EEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEE
T ss_pred             eecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEecccccccc
Confidence            99988664 488999999 8899988764                      5999999999999999999987       


Q ss_pred             ------------CCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCC
Q psy3166         133 ------------PHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANP  200 (228)
Q Consensus       133 ------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~p  200 (228)
                                  ++.+||+|||++......      .....+|..|+|||++.+..++.++|+|||||++|+|++ |..|
T Consensus       161 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~p  233 (339)
T 1z57_A          161 NPKIKRDERTLINPDIKVVDFGSATYDDEH------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTV  233 (339)
T ss_dssp             C----CEEEEESCCCEEECCCSSCEETTSC------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHH-SSCS
T ss_pred             CCccccccccccCCCceEeeCcccccCccc------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHh-CCCC
Confidence                        667999999998743221      234567889999999998889999999999999999999 9999


Q ss_pred             CCCCCHHHHHHHHHc
Q psy3166         201 YPHIPLCRIVHYLST  215 (228)
Q Consensus       201 f~~~~~~~~~~~~~~  215 (228)
                      |...+..+....+..
T Consensus       234 f~~~~~~~~~~~~~~  248 (339)
T 1z57_A          234 FPTHDSKEHLAMMER  248 (339)
T ss_dssp             CCCSCHHHHHHHHHH
T ss_pred             CCCCChHHHHHHHHH
Confidence            999888776655544


No 218
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=4.2e-35  Score=238.60  Aligned_cols=193  Identities=24%  Similarity=0.397  Sum_probs=153.4

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH-HHHHHHHHHHHHHHhcC--CCCceEEeee
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-KTYDKFLKEINLMKDVG--KHDHIVSFIG   85 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~--~h~ni~~~~~   85 (228)
                      .++|++.+.||+|+||.||+|+...        ..+..||+|.++..... .....+.+|+.+++.+.  +||||+++++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~   81 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLK--------NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFD   81 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETT--------TTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEE
T ss_pred             hhceeeeeeecccccEEEEEEEecC--------CCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeee
Confidence            3789999999999999999998521        33457999998643211 11123456777666553  7999999999


Q ss_pred             EEE-----c-CceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecCCCcEE
Q psy3166          86 CCY-----K-DELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSSPHVVK  137 (228)
Q Consensus        86 ~~~-----~-~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~~~~~k  137 (228)
                      ++.     . ...+++||++. ++|.+++..                      .|||++||+|+||||+||+++.++.+|
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~k  160 (326)
T 1blx_A           82 VCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK  160 (326)
T ss_dssp             EEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred             eeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEE
Confidence            875     2 33789999997 599888754                      589999999999999999999999999


Q ss_pred             EeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy3166         138 ISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLST  215 (228)
Q Consensus       138 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~  215 (228)
                      |+|||++........    .....++..|+|||++.+..++.++|+||||+++|+|++ |..||.+.+..+....+..
T Consensus       161 l~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~i~~  233 (326)
T 1blx_A          161 LADFGLARIYSFQMA----LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILD  233 (326)
T ss_dssp             ECSCCSCCCCCGGGG----GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHH
T ss_pred             EecCcccccccCCCC----ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHH
Confidence            999999875433221    223566788999999998889999999999999999999 9999999888777666554


No 219
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=7.8e-35  Score=233.33  Aligned_cols=193  Identities=31%  Similarity=0.461  Sum_probs=158.2

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++.+.||+|+||.||+|...         .++..||+|.+.... .......+.+|+++++++ +||||+++++++
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~---------~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~   90 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDR---------ITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEIL   90 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEc---------CCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEE
Confidence            368999999999999999999843         345579999986442 223346788999999999 999999999998


Q ss_pred             EcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCC---CcEEEeeccC
Q psy3166          88 YKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSP---HVVKISDFGL  143 (228)
Q Consensus        88 ~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~---~~~kl~dfg~  143 (228)
                      .... .+++||++++++|.+++..                    .|||+++++|+||||+||+++.+   +.+||+|||+
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~  170 (287)
T 2wei_A           91 EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL  170 (287)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred             eCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCc
Confidence            7654 7899999999999887653                    69999999999999999999764   4799999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLSTGY  217 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~~~~  217 (228)
                      +........    .....++..|+|||.+.+. ++.++|+||||+++|+|++ |..||.+.+..++...+..+.
T Consensus       171 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~  238 (287)
T 2wei_A          171 STCFQQNTK----MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVETGK  238 (287)
T ss_dssp             GGTBCCCSS----CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCC
T ss_pred             ceeecCCCc----cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Confidence            875433211    1223467789999988754 8899999999999999999 999999998888888877764


No 220
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=4.4e-35  Score=235.36  Aligned_cols=181  Identities=24%  Similarity=0.343  Sum_probs=145.5

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE-
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC-   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~-   87 (228)
                      .++|++.+.||+|+||.||+|+.         ..+++.||+|.+......   ..+.+|+.+++++ +|++++..+..+ 
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l-~~~~~i~~~~~~~   74 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTD---------IAAGEEVAIKLECVKTKH---PQLHIESKIYKMM-QGGVGIPTIRWCG   74 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEE---------TTTTEEEEEEEEESCSSC---CHHHHHHHHHHHH-TTSTTCCCEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEE---------cCCCcEEEEEEecCCcch---hHHHHHHHHHHHh-hcCCCCCcccccc
Confidence            47899999999999999999983         445568999998654322   3577899999999 666555444444 


Q ss_pred             Ec-CceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeec---CCCcEEEeecc
Q psy3166          88 YK-DELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLS---SPHVVKISDFG  142 (228)
Q Consensus        88 ~~-~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~---~~~~~kl~dfg  142 (228)
                      .. +..+++||++ +++|.+++..                     .|||+++|+|+||||+||+++   .++.+||+|||
T Consensus        75 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg  153 (296)
T 3uzp_A           75 AEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG  153 (296)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCT
T ss_pred             CCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCC
Confidence            33 3478999999 8999998863                     699999999999999999994   78899999999


Q ss_pred             Cccccccccccc----CCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3166         143 LSEDIYEQNVFQ----NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI  204 (228)
Q Consensus       143 ~~~~~~~~~~~~----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~  204 (228)
                      ++..........    .......++..|+|||.+.+..++.++|+||||+++|+|++ |..||.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~  218 (296)
T 3uzp_A          154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL-GSLPWQGL  218 (296)
T ss_dssp             TCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSC
T ss_pred             CcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHh-CCCCCCCc
Confidence            987654432211    11234577889999999998889999999999999999999 99999874


No 221
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=5.7e-35  Score=240.76  Aligned_cols=188  Identities=23%  Similarity=0.396  Sum_probs=152.0

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++.+.||+|+||.||+|+.         ..++..||+|.+.... .......+.+|+.+++++ +||||+++++++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~   92 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAID---------KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVF   92 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEE
T ss_pred             CceEEEeeeEecCCCeEEEEEEE---------CCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheE
Confidence            37899999999999999999984         4456689999987543 344456788999999999 899999999998


Q ss_pred             EcCc-------eEEEEecCCCCcHHHHHHH------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          88 YKDE-------LRLVVEYCALGDLQSYLRE------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        88 ~~~~-------~~lv~e~~~~~~L~~~l~~------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ....       .+++||++. ++|.+++..                  .|||++||+|+||||+||+++.++.+||+|||
T Consensus        93 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg  171 (353)
T 3coi_A           93 TPASSLRNFYDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG  171 (353)
T ss_dssp             CSCSSGGGCCCCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred             ecccccccceeEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecc
Confidence            6542       489999996 477654321                  79999999999999999999999999999999


Q ss_pred             CcccccccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVHYLS  214 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~~~~  214 (228)
                      ++......      .....++..|+|||++.+ ..++.++|+||+||++|+|++ |..||.+.+..+.+..+.
T Consensus       172 ~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~~~i~  237 (353)
T 3coi_A          172 LARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT-GKTLFKGKDYLDQLTQIL  237 (353)
T ss_dssp             CTTC--------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHH-SSCSSBSSCHHHHHHHHH
T ss_pred             cccCCCCC------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Confidence            98753221      223466788999999886 568899999999999999999 999999988766655543


No 222
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=5.2e-35  Score=245.33  Aligned_cols=184  Identities=25%  Similarity=0.388  Sum_probs=134.0

Q ss_pred             Cceee-eeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166          10 ERLIL-GEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~-~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      +.|++ .+.||+|+||+||+|+...+       .++..||+|.+......   ..+.+|+.+|+++ +||||+++++++.
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~-------~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l-~hpniv~~~~~~~   88 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDG-------KDDKDYALKQIEGTGIS---MSACREIALLREL-KHPNVISLQKVFL   88 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSS-------SCCCCEEEEECSSSSCC---HHHHHHHHHHHHC-CCTTBCCCCEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccC-------CCCeEEEEEEECCCCCC---HHHHHHHHHHHhc-CCCCeeeEeeEEe
Confidence            34666 45899999999999986432       23456999999755332   3567899999999 8999999999985


Q ss_pred             c---CceEEEEecCCCCcHHHHHHH-----------------------------hcccCCCCcccCCCCCCEee----cC
Q psy3166          89 K---DELRLVVEYCALGDLQSYLRE-----------------------------EYLSNNKVVHRDLATRNILL----SS  132 (228)
Q Consensus        89 ~---~~~~lv~e~~~~~~L~~~l~~-----------------------------~~lh~~~i~H~~lk~~nil~----~~  132 (228)
                      .   ..+++||||+.+ +|.+++..                             .|||+++|+||||||+|||+    +.
T Consensus        89 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~  167 (405)
T 3rgf_A           89 SHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPE  167 (405)
T ss_dssp             ETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTT
T ss_pred             cCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCC
Confidence            4   348899999964 77666531                             69999999999999999999    66


Q ss_pred             CCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         133 PHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       133 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      ++.+||+|||++..+..............||..|+|||++.+. .++.++|||||||++|+|++ |..||.+...
T Consensus       168 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~  241 (405)
T 3rgf_A          168 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-SEPIFHCRQE  241 (405)
T ss_dssp             TTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHH-SSCTTCCCC-
T ss_pred             CCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHh-CCCCCCCccc
Confidence            7899999999997654322211223345678889999999874 48999999999999999999 9999977543


No 223
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=8.1e-35  Score=240.10  Aligned_cols=190  Identities=25%  Similarity=0.388  Sum_probs=139.8

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      ..++|++.+.||+|+||.||+|+..         .++..||+|.+......  .....++++.+..+ +||||+++++++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~--~~~~~~~~~~l~~l-~h~niv~~~~~~   88 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEK---------STGMSVAIKKVIQDPRF--RNRELQIMQDLAVL-HHPNIVQLQSYF   88 (360)
T ss_dssp             HHTTEEEC----------CEEEEET---------TTCCEEEEEEEECCTTC--CCHHHHHHHHHHHH-CCTTBCCEEEEE
T ss_pred             hccceEEEEEEecCCCeEEEEEEEC---------CCCCEEEEEEEecCccc--cHHHHHHHHHHHhc-CCCCcccHHHhh
Confidence            3468999999999999999999843         34557999988644221  23456778888888 999999999988


Q ss_pred             Ec-Cc-------eEEEEecCCCCcHHHHHHH------------------------hccc--CCCCcccCCCCCCEeecC-
Q psy3166          88 YK-DE-------LRLVVEYCALGDLQSYLRE------------------------EYLS--NNKVVHRDLATRNILLSS-  132 (228)
Q Consensus        88 ~~-~~-------~~lv~e~~~~~~L~~~l~~------------------------~~lh--~~~i~H~~lk~~nil~~~-  132 (228)
                      .. +.       .+++|||+.+ +|.+.+..                        .|||  +++|+||||||+||+++. 
T Consensus        89 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~  167 (360)
T 3e3p_A           89 YTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA  167 (360)
T ss_dssp             EEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETT
T ss_pred             hccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCC
Confidence            54 11       6799999976 44433221                        5788  999999999999999997 


Q ss_pred             CCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy3166         133 PHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNI-YTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRIVH  211 (228)
Q Consensus       133 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~~~  211 (228)
                      ++.+||+|||++..+....    ......+|..|+|||++.+.. ++.++|+|||||++|+|++ |..||.+.+..+...
T Consensus       168 ~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~-g~~pf~~~~~~~~~~  242 (360)
T 3e3p_A          168 DGTLKLCDFGSAKKLSPSE----PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML-GEPIFRGDNSAGQLH  242 (360)
T ss_dssp             TTEEEECCCTTCBCCCTTS----CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHH
T ss_pred             CCcEEEeeCCCceecCCCC----CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHh-CCCCcCCCChHHHHH
Confidence            8999999999987554332    122356788899999987554 8999999999999999999 999999988877766


Q ss_pred             HHHc
Q psy3166         212 YLST  215 (228)
Q Consensus       212 ~~~~  215 (228)
                      .+.+
T Consensus       243 ~~~~  246 (360)
T 3e3p_A          243 EIVR  246 (360)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6544


No 224
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=1.2e-34  Score=232.70  Aligned_cols=182  Identities=24%  Similarity=0.337  Sum_probs=142.8

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE-
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC-   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~-   87 (228)
                      .++|++.+.||+|+||.||+|+.         ..++..||+|.+.....   ...+.+|+.+++++ +|++++..+..+ 
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~~~~~i~~~~~~~   74 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTD---------IAAGEEVAIKLECVKTK---HPQLHIESKIYKMM-QGGVGIPTIRWCG   74 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEE---------TTTTEEEEEEEEEC------CCCHHHHHHHHHHH-TTSTTCCCEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEE---------cCCCceEEEEeeccccc---chHHHHHHHHHHHh-cCCCCCCeeeeec
Confidence            47899999999999999999983         44556799998654322   23467899999999 665555554444 


Q ss_pred             Ec-CceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEee---cCCCcEEEeecc
Q psy3166          88 YK-DELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILL---SSPHVVKISDFG  142 (228)
Q Consensus        88 ~~-~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~---~~~~~~kl~dfg  142 (228)
                      .. +..+++||++ +++|.+++..                     .|||+++|+||||||+||++   +.++.+||+|||
T Consensus        75 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg  153 (296)
T 4hgt_A           75 AEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG  153 (296)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred             CCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence            43 3478999999 9999998863                     69999999999999999999   778899999999


Q ss_pred             Cccccccccccc----CCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q psy3166         143 LSEDIYEQNVFQ----NGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP  205 (228)
Q Consensus       143 ~~~~~~~~~~~~----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~  205 (228)
                      ++..........    .......++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+.+
T Consensus       154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~  219 (296)
T 4hgt_A          154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL-GSLPWQGLK  219 (296)
T ss_dssp             TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCC
T ss_pred             cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhc-CCCCCcccc
Confidence            987654432211    12234677889999999998889999999999999999999 999998753


No 225
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=1.9e-34  Score=232.00  Aligned_cols=191  Identities=26%  Similarity=0.469  Sum_probs=146.4

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||.||+|+.         ..++..||+|.++..  ......+.+|+.+++++ +||||+++++++..
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   73 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARN---------ALDSRYYAIKKIRHT--EEKLSTILSEVMLLASL-NHQYVVRYYAAWLE   73 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEE---------TTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEE
T ss_pred             ccchhhheeccCCcEEEEEEEE---------cCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhc-CchHHHHHHHHHHh
Confidence            5799999999999999999984         334557999998643  34456788999999999 99999999998743


Q ss_pred             --------------CceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecCCC
Q psy3166          90 --------------DELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSSPH  134 (228)
Q Consensus        90 --------------~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~~~  134 (228)
                                    +..+++||++++++|.+++..                     .|||+++|+|+||||+||+++.++
T Consensus        74 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~  153 (303)
T 1zy4_A           74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR  153 (303)
T ss_dssp             CCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             hcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCC
Confidence                          237899999999999998863                     699999999999999999999999


Q ss_pred             cEEEeeccCcccccccccc-----------cCCCCCCCCcceeecccccccC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Q psy3166         135 VVKISDFGLSEDIYEQNVF-----------QNGEPSEKLPIRWLALESLVSN-IYTNKSDVWSFGVVLWEIVTLGANPYP  202 (228)
Q Consensus       135 ~~kl~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Diwslg~~~~~l~t~g~~pf~  202 (228)
                      .++|+|||++.........           ........++..|+|||++.+. .++.++|+||+||++|+|++    ||.
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~----p~~  229 (303)
T 1zy4_A          154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFS  229 (303)
T ss_dssp             CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS----CCS
T ss_pred             CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh----ccC
Confidence            9999999998754322100           0112234567789999998854 68899999999999999997    555


Q ss_pred             C-CCHHHHHHHHHcC
Q psy3166         203 H-IPLCRIVHYLSTG  216 (228)
Q Consensus       203 ~-~~~~~~~~~~~~~  216 (228)
                      . .+..++...+...
T Consensus       230 ~~~~~~~~~~~~~~~  244 (303)
T 1zy4_A          230 TGMERVNILKKLRSV  244 (303)
T ss_dssp             SHHHHHHHHHHHHST
T ss_pred             CchhHHHHHHhcccc
Confidence            4 2333445555543


No 226
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=9.2e-35  Score=240.11  Aligned_cols=192  Identities=23%  Similarity=0.353  Sum_probs=148.9

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC----------CHHHHHHHHHHHHHHHhcCC
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA----------DAKTYDKFLKEINLMKDVGK   76 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~~e~~~l~~l~~   76 (228)
                      ...++|++.+.||+|+||.||+|....          +..||+|.+....          .....+.+.+|+.+++++ +
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~   87 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDSE----------GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-H   87 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECTT----------SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-C
T ss_pred             HhccceEEeEEeccCCCEEEEEEECCC----------CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-C
Confidence            345799999999999999999997422          4569999885432          122346788999999999 9


Q ss_pred             CCceEEeeeEEEc------CceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEe
Q psy3166          77 HDHIVSFIGCCYK------DELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNIL  129 (228)
Q Consensus        77 h~ni~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil  129 (228)
                      ||||+++++++..      ..+++|||++. ++|.+++..                     .|||+++|+|+||||+||+
T Consensus        88 h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl  166 (362)
T 3pg1_A           88 HPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL  166 (362)
T ss_dssp             CTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             CcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEE
Confidence            9999999998743      13789999997 577776643                     6999999999999999999


Q ss_pred             ecCCCcEEEeeccCcccccccccccCCCCCCCCcceeeccccccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy3166         130 LSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS-NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCR  208 (228)
Q Consensus       130 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~  208 (228)
                      ++.++.+||+|||++.......    ......++..|+|||++.+ ..++.++|+||+||++|+|++ |..||.+.+..+
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~  241 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDTADA----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKALFRGSTFYN  241 (362)
T ss_dssp             ECTTCCEEECCTTC-------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHH
T ss_pred             EcCCCCEEEEecCccccccccc----ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHh-CCCCCCCCCHHH
Confidence            9999999999999986433321    1223466788999999876 668999999999999999999 999999988777


Q ss_pred             HHHHHHc
Q psy3166         209 IVHYLST  215 (228)
Q Consensus       209 ~~~~~~~  215 (228)
                      ..+.+..
T Consensus       242 ~~~~i~~  248 (362)
T 3pg1_A          242 QLNKIVE  248 (362)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7666543


No 227
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=1.2e-34  Score=241.61  Aligned_cols=178  Identities=25%  Similarity=0.367  Sum_probs=146.6

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcC-------CCCceE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG-------KHDHIV   81 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-------~h~ni~   81 (228)
                      .++|++.+.||+|+||+||+|+.         ..++..||+|.++..  ......+.+|+.+++++.       +|+||+
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv  104 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWD---------IQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVV  104 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBC
T ss_pred             CCeEEEEEEeeecCCeeEEEEEe---------cCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceee
Confidence            36899999999999999999973         445668999998744  344567889999999983       178899


Q ss_pred             EeeeEEE----c-CceEEEEecCCCCcHHHHHHH----------------------hcccCC-CCcccCCCCCCEeecCC
Q psy3166          82 SFIGCCY----K-DELRLVVEYCALGDLQSYLRE----------------------EYLSNN-KVVHRDLATRNILLSSP  133 (228)
Q Consensus        82 ~~~~~~~----~-~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~-~i~H~~lk~~nil~~~~  133 (228)
                      ++++++.    . ...++|||++ ++++.+++..                      .|||++ ||+||||||+|||++.+
T Consensus       105 ~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~  183 (397)
T 1wak_A          105 QLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN  183 (397)
T ss_dssp             CEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCC
T ss_pred             eeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEecc
Confidence            9999876    2 2478999999 5566655432                      699998 99999999999999876


Q ss_pred             C-------------------------------------------------cEEEeeccCcccccccccccCCCCCCCCcc
Q psy3166         134 H-------------------------------------------------VVKISDFGLSEDIYEQNVFQNGEPSEKLPI  164 (228)
Q Consensus       134 ~-------------------------------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~  164 (228)
                      +                                                 .+||+|||++......      .....+|.
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~------~~~~~gt~  257 (397)
T 1wak_A          184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH------FTEDIQTR  257 (397)
T ss_dssp             HHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC------SCSCCSCG
T ss_pred             chhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc------CccCCCCC
Confidence            5                                                 7999999998754322      23456788


Q ss_pred             eeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q psy3166         165 RWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIP  205 (228)
Q Consensus       165 ~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~  205 (228)
                      .|+|||++.+..++.++|||||||++|+|++ |..||.+.+
T Consensus       258 ~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~  297 (397)
T 1wak_A          258 QYRSLEVLIGSGYNTPADIWSTACMAFELAT-GDYLFEPHS  297 (397)
T ss_dssp             GGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH-SSCSCCCCC
T ss_pred             cccCChhhcCCCCCcHHHHHHHHHHHHHHhh-CCCCCCCCc
Confidence            9999999998889999999999999999999 999998755


No 228
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=1e-35  Score=244.36  Aligned_cols=196  Identities=22%  Similarity=0.401  Sum_probs=159.1

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH----------------HHHHHHHHHHHHH
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA----------------KTYDKFLKEINLM   71 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~----------------~~~~~~~~e~~~l   71 (228)
                      ..++|++.+.||+|+||.||+|..           ++..||+|.+......                .....+.+|+.++
T Consensus        29 ~~~~y~~~~~lg~G~~g~V~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   97 (348)
T 2pml_X           29 YINDYRIIRTLNQGKFNKIILCEK-----------DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII   97 (348)
T ss_dssp             EETTEEEEEEEECCSSCCEEEEEE-----------TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHH
T ss_pred             ccCceEEEEEEcCCCCeEEEEEEc-----------CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHH
Confidence            347999999999999999999984           4457999998643110                0116788999999


Q ss_pred             HhcCCCCceEEeeeEEEcCc-eEEEEecCCCCcHHHH------HHH----------------------hcccC-CCCccc
Q psy3166          72 KDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSY------LRE----------------------EYLSN-NKVVHR  121 (228)
Q Consensus        72 ~~l~~h~ni~~~~~~~~~~~-~~lv~e~~~~~~L~~~------l~~----------------------~~lh~-~~i~H~  121 (228)
                      +++ +||||+++++++.... .++|||++++++|.++      +..                      .|||+ +||+|+
T Consensus        98 ~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~  176 (348)
T 2pml_X           98 TDI-KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR  176 (348)
T ss_dssp             TTC-CCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECC
T ss_pred             HhC-CCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeec
Confidence            999 8999999999987754 7899999999888776      321                      69998 999999


Q ss_pred             CCCCCCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccC-CCCc-hhhHHHHHHHHHHHHhCCCC
Q psy3166         122 DLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSN-IYTN-KSDVWSFGVVLWEIVTLGAN  199 (228)
Q Consensus       122 ~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~-~~Diwslg~~~~~l~t~g~~  199 (228)
                      ||||+||+++.++.++|+|||.+.......     .....++..|+|||.+.+. .++. ++|+||||+++|+|++ |..
T Consensus       177 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~-g~~  250 (348)
T 2pml_X          177 DVKPSNILMDKNGRVKLSDFGESEYMVDKK-----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFY-NVV  250 (348)
T ss_dssp             CCCGGGEEECTTSCEEECCCTTCEECBTTE-----ECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHH-SSC
T ss_pred             CCChHhEEEcCCCcEEEecccccccccccc-----ccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHh-CCC
Confidence            999999999999999999999987543321     1235677889999999877 5666 8999999999999999 999


Q ss_pred             CCCCCCH-HHHHHHHHcCCCCCCC
Q psy3166         200 PYPHIPL-CRIVHYLSTGYRMERP  222 (228)
Q Consensus       200 pf~~~~~-~~~~~~~~~~~~~~~p  222 (228)
                      ||...+. .++.+.+..+ .++.|
T Consensus       251 pf~~~~~~~~~~~~i~~~-~~~~~  273 (348)
T 2pml_X          251 PFSLKISLVELFNNIRTK-NIEYP  273 (348)
T ss_dssp             SSCCSSCSHHHHHHHTSC-CCCCC
T ss_pred             CCCCCCcHHHHHHHHhcc-CcCCc
Confidence            9998776 6777777766 44444


No 229
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1.4e-34  Score=247.44  Aligned_cols=184  Identities=21%  Similarity=0.301  Sum_probs=148.7

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .++|++.+.||+|+||.||+|.+         ..++..||||.+......   .++..|+.+++.+.+++++..+..++.
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~---------~~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~   73 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTN---------IQTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGV   73 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEE---------TTTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEE---------CCCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEe
Confidence            47899999999999999999984         344557999987654322   346789999999955567766666555


Q ss_pred             cC-ceEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEee---cCCCcEEEeeccC
Q psy3166          89 KD-ELRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILL---SSPHVVKISDFGL  143 (228)
Q Consensus        89 ~~-~~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~---~~~~~~kl~dfg~  143 (228)
                      .. ..+++|||+ +++|.+++..                     .|||+++|+||||||+|||+   +.++.+||+|||+
T Consensus        74 ~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl  152 (483)
T 3sv0_A           74 EGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL  152 (483)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred             eCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCc
Confidence            44 478999999 8999998863                     69999999999999999999   5788999999999


Q ss_pred             cccccccccc----cCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         144 SEDIYEQNVF----QNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       144 ~~~~~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      ++.+......    ........||..|++||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus       153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~  218 (483)
T 3sv0_A          153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKA  218 (483)
T ss_dssp             CEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCCC
T ss_pred             ceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHh-CCCCCccccc
Confidence            9765443221    112235678889999999999899999999999999999999 9999988543


No 230
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=7.3e-34  Score=233.49  Aligned_cols=188  Identities=23%  Similarity=0.337  Sum_probs=152.3

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCc------eEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDH------IVS   82 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~n------i~~   82 (228)
                      .++|++.+.||+|+||.||+|....+        .+..||+|.++..  ......+.+|+.+++++ +|++      ++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~--------~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~   86 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHAR--------GKSQVALKIIRNV--GKYREAARLEINVLKKI-KEKDKENKFLCVL   86 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTT--------TTEEEEEEEECSC--HHHHHHHHHHHHHHHHH-HHHCTTSCSCBCC
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCC--------CceEEEEEEEccc--ccchhHHHHHHHHHHHH-hhcCCCCceeEEE
Confidence            47899999999999999999985332        2256999998743  34456778899999988 6554      888


Q ss_pred             eeeEEEc-CceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEee---------
Q psy3166          83 FIGCCYK-DELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILL---------  130 (228)
Q Consensus        83 ~~~~~~~-~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~---------  130 (228)
                      +.+++.. +..+++||++ ++++.+++..                      .|||+++|+||||||+||++         
T Consensus        87 ~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~  165 (355)
T 2eu9_A           87 MSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLY  165 (355)
T ss_dssp             EEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEE
T ss_pred             eeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccc
Confidence            8887765 4588999999 5677666543                      69999999999999999999         


Q ss_pred             ----------cCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCC
Q psy3166         131 ----------SSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANP  200 (228)
Q Consensus       131 ----------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~p  200 (228)
                                +.++.+||+|||++.....      ......||..|+|||++.+..++.++|+|||||++|+|++ |..|
T Consensus       166 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~p  238 (355)
T 2eu9_A          166 NEHKSCEEKSVKNTSIRVADFGSATFDHE------HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR-GFTL  238 (355)
T ss_dssp             CCC-CCCEEEESCCCEEECCCTTCEETTS------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCS
T ss_pred             cccccccccccCCCcEEEeecCccccccc------cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh-CCCC
Confidence                      5678999999999874322      1234567889999999998889999999999999999999 9999


Q ss_pred             CCCCCHHHHHHHHHc
Q psy3166         201 YPHIPLCRIVHYLST  215 (228)
Q Consensus       201 f~~~~~~~~~~~~~~  215 (228)
                      |.+.+..+....+.+
T Consensus       239 f~~~~~~~~~~~~~~  253 (355)
T 2eu9_A          239 FQTHENREHLVMMEK  253 (355)
T ss_dssp             CCCSSHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHH
Confidence            999888776655544


No 231
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=8.3e-35  Score=239.74  Aligned_cols=188  Identities=16%  Similarity=0.237  Sum_probs=148.0

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEE-----
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVS-----   82 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~-----   82 (228)
                      ..++|++.+.||+|+||.||+|+...+... .....+..||+|.+...      ..+.+|+++++++ +||||++     
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~-~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l-~h~niv~~~~~~  111 (352)
T 2jii_A           40 SGRQWKLKSFQTRDNQGILYEAAPTSTLTC-DSGPQKQKFSLKLDAKD------GRLFNEQNFFQRA-AKPLQVNKWKKL  111 (352)
T ss_dssp             TSCEEEEEEEEEEETTEEEEEEEECC------------CEEEEEEETT------STHHHHHHHHHHH-CCHHHHHHHHHH
T ss_pred             cCCeEEEEEEecCCCCeEEEEEeecCCccc-cccccCceEEEEEeccc------chHHHHHHHHHHh-cccchhhhhhhh
Confidence            358999999999999999999987553210 01113557999998754      3467899999999 8999887     


Q ss_pred             ----------eeeEEEc--CceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCE
Q psy3166          83 ----------FIGCCYK--DELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNI  128 (228)
Q Consensus        83 ----------~~~~~~~--~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~ni  128 (228)
                                +++++..  ...++||||+ +++|.+++..                      .|||+++|+||||||+||
T Consensus       112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NI  190 (352)
T 2jii_A          112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI  190 (352)
T ss_dssp             TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGE
T ss_pred             ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHE
Confidence                      4555543  4478999999 9999999864                      599999999999999999


Q ss_pred             eecCCC--cEEEeeccCcccccccccc----cCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q psy3166         129 LLSSPH--VVKISDFGLSEDIYEQNVF----QNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP  202 (228)
Q Consensus       129 l~~~~~--~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~  202 (228)
                      +++.++  .+||+|||++..+......    ........++..|+|||.+.+..++.++|+||||+++|+|++ |..||.
T Consensus       191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~pf~  269 (352)
T 2jii_A          191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY-GFLPWT  269 (352)
T ss_dssp             EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SCCTTG
T ss_pred             EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCcc
Confidence            999988  8999999999765443211    112234577889999999998889999999999999999999 999998


Q ss_pred             CCC
Q psy3166         203 HIP  205 (228)
Q Consensus       203 ~~~  205 (228)
                      ...
T Consensus       270 ~~~  272 (352)
T 2jii_A          270 NCL  272 (352)
T ss_dssp             GGT
T ss_pred             cCC
Confidence            753


No 232
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=2.6e-34  Score=233.01  Aligned_cols=207  Identities=23%  Similarity=0.394  Sum_probs=154.5

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccC-CCHHHHHHHHHHHHHHHhcCC-CCceEEe
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKAN-ADAKTYDKFLKEINLMKDVGK-HDHIVSF   83 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~~-h~ni~~~   83 (228)
                      .+..++|++.+.||+|+||.||++....          +..||+|.+... ........+.+|+.+++++.+ ||||+++
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~   93 (313)
T 3cek_A           24 SVKGRIYSILKQIGSGGSSKVFQVLNEK----------KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL   93 (313)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEECTT----------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCE
T ss_pred             eeccceEEEEEEecCCCCEEEEEEEcCC----------CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEE
Confidence            3567889999999999999999997422          446999998654 345556788899999999943 6999999


Q ss_pred             eeEEEcCc-eEEEEecCCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeecCCCcEEEeecc
Q psy3166          84 IGCCYKDE-LRLVVEYCALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFG  142 (228)
Q Consensus        84 ~~~~~~~~-~~lv~e~~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg  142 (228)
                      ++++..+. .+++|| +.+++|.+++..                    .|||+++|+|+||||+||+++. +.+||+|||
T Consensus        94 ~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg  171 (313)
T 3cek_A           94 YDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFG  171 (313)
T ss_dssp             EEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred             EEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeecc
Confidence            99887655 788999 568899998764                    6999999999999999999964 899999999


Q ss_pred             CcccccccccccCCCCCCCCcceeeccccccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHH
Q psy3166         143 LSEDIYEQNVFQNGEPSEKLPIRWLALESLVS-----------NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC-RIV  210 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-----------~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~-~~~  210 (228)
                      ++..+...... .......++..|+|||.+..           ..++.++|+||||+++|+|++ |..||...... ...
T Consensus       172 ~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~~  249 (313)
T 3cek_A          172 IANQMQPDTTS-VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKL  249 (313)
T ss_dssp             SSCC---------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHH-SSCTTTTCCSHHHHH
T ss_pred             ccccccCcccc-ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHh-CCCchhhHHHHHHHH
Confidence            98755432211 11223467889999999875           367889999999999999999 99999875432 233


Q ss_pred             HH-HHcCCCCCCCCCCC
Q psy3166         211 HY-LSTGYRMERPASCN  226 (228)
Q Consensus       211 ~~-~~~~~~~~~p~~~~  226 (228)
                      .. +....+.+.|..++
T Consensus       250 ~~~~~~~~~~~~~~~~~  266 (313)
T 3cek_A          250 HAIIDPNHEIEFPDIPE  266 (313)
T ss_dssp             HHHHCTTSCCCCCCCSC
T ss_pred             HHHHhcccccCCcccch
Confidence            33 33344445555544


No 233
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=3.8e-34  Score=232.12  Aligned_cols=201  Identities=22%  Similarity=0.325  Sum_probs=142.0

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHH-HHHHhcCCCCceEEee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEI-NLMKDVGKHDHIVSFI   84 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~-~~l~~l~~h~ni~~~~   84 (228)
                      .+..++|++.+.||+|+||.||+|...         .++..||+|.+..........+...|. .+++.+ +||||++++
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~   90 (318)
T 2dyl_A           21 QAEINDLENLGEMGSGTCGQVWKMRFR---------KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-DCPYIVQCF   90 (318)
T ss_dssp             ECCGGGEEEEEEC------CEEEEEET---------TTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-TCTTBCCEE
T ss_pred             hhhhccccccceeeecCCeeEEEEEEe---------cCCeEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCceeeEE
Confidence            456679999999999999999999853         345579999997665544444444444 456666 999999999


Q ss_pred             eEEEcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCC-CCcccCCCCCCEeecCCCcEEEeec
Q psy3166          85 GCCYKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNN-KVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        85 ~~~~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~-~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      +++.... .+++||++ ++.+......                     .|||++ +|+|+||||+||+++.++.+||+||
T Consensus        91 ~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~df  169 (318)
T 2dyl_A           91 GTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDF  169 (318)
T ss_dssp             EEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEEC
Confidence            9987654 78999999 4455444331                     699995 9999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCCCCcceeecccccc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHc
Q psy3166         142 GLSEDIYEQNVFQNGEPSEKLPIRWLALESLV-----SNIYTNKSDVWSFGVVLWEIVTLGANPYPH-IPLCRIVHYLST  215 (228)
Q Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----~~~~~~~~Diwslg~~~~~l~t~g~~pf~~-~~~~~~~~~~~~  215 (228)
                      |++..+.....    .....++..|+|||.+.     ...++.++|+||||+++|+|++ |..||.. ....+....+..
T Consensus       170 g~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~  244 (318)
T 2dyl_A          170 GISGRLVDDKA----KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT-GQFPYKNCKTDFEVLTKVLQ  244 (318)
T ss_dssp             TTC------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHH-SSCTTTTCCSHHHHHHHHHH
T ss_pred             CCchhccCCcc----ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHh-CCCCCCCCCccHHHHHHHhc
Confidence            99865433221    12345677899999985     4457889999999999999999 9999987 445566777766


Q ss_pred             CCCCCCC
Q psy3166         216 GYRMERP  222 (228)
Q Consensus       216 ~~~~~~p  222 (228)
                      +.++..|
T Consensus       245 ~~~~~~~  251 (318)
T 2dyl_A          245 EEPPLLP  251 (318)
T ss_dssp             SCCCCCC
T ss_pred             cCCCCCC
Confidence            6565554


No 234
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=1.1e-34  Score=231.56  Aligned_cols=174  Identities=26%  Similarity=0.481  Sum_probs=146.1

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ++|++.+.||+|+||.||+|...         .++..||+|.++...     ..+.+|+++++++ +||||+++++++..
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~---------~~~~~vavK~~~~~~-----~~~~~e~~~l~~l-~h~~i~~~~~~~~~   75 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHR---------IDGKTYVIKRVKYNN-----EKAEREVKALAKL-DHVNIVHYNGCWDG   75 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEET---------TTCCEEEEEEEECCS-----GGGHHHHHHHHHC-CCTTBCCEEEEEEE
T ss_pred             cccceeeeeccCCceEEEEEEEc---------CCCeEEEEEEecccc-----HHHHHHHHHHHhC-CCCCEEEEeeeEec
Confidence            57999999999999999999853         344579999987543     2456899999999 99999999998743


Q ss_pred             -----------------CceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEee
Q psy3166          90 -----------------DELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILL  130 (228)
Q Consensus        90 -----------------~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~  130 (228)
                                       ...+++|||+++++|.+++..                      .|||+++|+|+||||+||++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~  155 (284)
T 2a19_B           76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL  155 (284)
T ss_dssp             EEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             cccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE
Confidence                             227899999999999998853                      59999999999999999999


Q ss_pred             cCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3166         131 SSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPH  203 (228)
Q Consensus       131 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~  203 (228)
                      +.++.++|+|||++.......    ......++..|+|||.+.+..++.++|+||||+++|+|++ |..||..
T Consensus       156 ~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-~~~~~~~  223 (284)
T 2a19_B          156 VDTKQVKIGDFGLVTSLKNDG----KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-VCDTAFE  223 (284)
T ss_dssp             EETTEEEECCCTTCEESSCCS----CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHS-CCSSHHH
T ss_pred             cCCCCEEECcchhheeccccc----cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHh-cCCcchh
Confidence            999999999999987554322    1223457788999999998889999999999999999999 8887643


No 235
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.4e-35  Score=238.88  Aligned_cols=179  Identities=30%  Similarity=0.493  Sum_probs=133.2

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhc-CCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV-GKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||.||+|.+.           +..||+|.++...    ...+.+|.+++..+ .+||||+++++++.
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~-----------~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~   67 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKWR-----------GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADN   67 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CT-----------TSCEEEEECC-TT----HHHHHHHHHHHTSTTCCC-CBCCEEEEEE
T ss_pred             ceeeehhhccCCCCeEEEEEEEc-----------CcceEEEEecccc----hhhHHHHHHHHHHHhccCcceeeeeeecc
Confidence            68999999999999999998743           3459999986432    24566788888773 29999999999886


Q ss_pred             cC-----ceEEEEecCCCCcHHHHHHH-------------------hccc--------CCCCcccCCCCCCEeecCCCcE
Q psy3166          89 KD-----ELRLVVEYCALGDLQSYLRE-------------------EYLS--------NNKVVHRDLATRNILLSSPHVV  136 (228)
Q Consensus        89 ~~-----~~~lv~e~~~~~~L~~~l~~-------------------~~lh--------~~~i~H~~lk~~nil~~~~~~~  136 (228)
                      ..     ..+++|||+++|+|.+++..                   .|||        +++|+||||||+||+++.++.+
T Consensus        68 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~  147 (303)
T 3gxj_A           68 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC  147 (303)
T ss_dssp             EECSSSEEEEEEEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC
T ss_pred             cCCCccceeEEEEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCE
Confidence            53     47899999999999999865                   6999        9999999999999999999999


Q ss_pred             EEeeccCccccccccccc-CCCCCCCCcceeecccccccC------CCCchhhHHHHHHHHHHHHhCC----------CC
Q psy3166         137 KISDFGLSEDIYEQNVFQ-NGEPSEKLPIRWLALESLVSN------IYTNKSDVWSFGVVLWEIVTLG----------AN  199 (228)
Q Consensus       137 kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Diwslg~~~~~l~t~g----------~~  199 (228)
                      ||+|||++.......... .......||..|+|||++.+.      .++.++|+||||+++|+|++ |          ..
T Consensus       148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~-g~~~~~~~~~~~~  226 (303)
T 3gxj_A          148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQL  226 (303)
T ss_dssp             -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGG-GBCBTTBC-CCCC
T ss_pred             EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHh-cCCCccccceeec
Confidence            999999987554432221 122334688899999998765      23368999999999999999 8          78


Q ss_pred             CCCCC
Q psy3166         200 PYPHI  204 (228)
Q Consensus       200 pf~~~  204 (228)
                      ||...
T Consensus       227 p~~~~  231 (303)
T 3gxj_A          227 PYYDL  231 (303)
T ss_dssp             TTTTT
T ss_pred             ccccc
Confidence            88654


No 236
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1.8e-34  Score=233.14  Aligned_cols=181  Identities=34%  Similarity=0.473  Sum_probs=146.9

Q ss_pred             ceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC---CHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166          11 RLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA---DAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus        11 ~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .|...+.||+|+||.||+|...           +..||+|.+....   .....+.+.+|+.+++++ +||||+++++++
T Consensus        32 ~~~~~~~lg~G~~g~Vy~~~~~-----------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~   99 (307)
T 2nru_A           32 ISVGGNKMGEGGFGVVYKGYVN-----------NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFS   99 (307)
T ss_dssp             TTTTCCEEEECSSEEEEEEESS-----------SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             ccccCCccccCCCeEEEEEEEC-----------CceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEE
Confidence            3455689999999999999742           3359999986432   233456788999999999 999999999998


Q ss_pred             EcC-ceEEEEecCCCCcHHHHHHH-----------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccC
Q psy3166          88 YKD-ELRLVVEYCALGDLQSYLRE-----------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGL  143 (228)
Q Consensus        88 ~~~-~~~lv~e~~~~~~L~~~l~~-----------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~  143 (228)
                      ... ..+++||++++++|.+++..                       .|||+++|+|+||||+||+++.++.++|+|||+
T Consensus       100 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~  179 (307)
T 2nru_A          100 SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGL  179 (307)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred             ecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccc
Confidence            764 48899999999999998762                       589999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         144 SEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      +......... .......|+..|+|||.+.+ .++.++|+||||+++|+|++ |..||.....
T Consensus       180 ~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~  239 (307)
T 2nru_A          180 ARASEKFAQT-VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIIT-GLPAVDEHRE  239 (307)
T ss_dssp             CEECCSCSSC-EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHH-CCCSBCTTBS
T ss_pred             cccccccccc-ccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHH-CCCCcccCcc
Confidence            8754332111 11223467889999998765 47889999999999999999 9999987543


No 237
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.4e-34  Score=232.14  Aligned_cols=180  Identities=27%  Similarity=0.489  Sum_probs=140.0

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhc-CCCCceEEeeeEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV-GKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~~h~ni~~~~~~~   87 (228)
                      .++|++.+.||+|+||.||+|...           +..||+|.+....    .....+|.+++..+ .+||||+++++++
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~-----------~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~  100 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKWR-----------GEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAAD  100 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEET-----------TEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEE
T ss_pred             ccceEEEeEeecCCCeEEEEEEEC-----------CceEEEEEEeccc----cchhhhHHHHHHHHhhcCCCeeeEEEEE
Confidence            368999999999999999999753           3469999986432    12334455554443 2899999999987


Q ss_pred             EcC-----ceEEEEecCCCCcHHHHHHH-------------------hcccCC--------CCcccCCCCCCEeecCCCc
Q psy3166          88 YKD-----ELRLVVEYCALGDLQSYLRE-------------------EYLSNN--------KVVHRDLATRNILLSSPHV  135 (228)
Q Consensus        88 ~~~-----~~~lv~e~~~~~~L~~~l~~-------------------~~lh~~--------~i~H~~lk~~nil~~~~~~  135 (228)
                      ...     ..++||||+++++|.+++..                   .|||++        +|+||||||+||+++.++.
T Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~  180 (337)
T 3mdy_A          101 IKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT  180 (337)
T ss_dssp             EESCGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred             ccCCCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence            653     47899999999999999864                   689998        9999999999999999999


Q ss_pred             EEEeeccCcccccccccc-cCCCCCCCCcceeecccccccCCCCch------hhHHHHHHHHHHHHhCC----------C
Q psy3166         136 VKISDFGLSEDIYEQNVF-QNGEPSEKLPIRWLALESLVSNIYTNK------SDVWSFGVVLWEIVTLG----------A  198 (228)
Q Consensus       136 ~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~~~~~~------~Diwslg~~~~~l~t~g----------~  198 (228)
                      +||+|||++..+...... ........||..|+|||++.+......      +|+|||||++|+|++ |          .
T Consensus       181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~t-g~~~~~~~~~~~  259 (337)
T 3mdy_A          181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVAR-RCVSGGIVEEYQ  259 (337)
T ss_dssp             EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHT-TBCBTTBCCCCC
T ss_pred             EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHh-ccCccccccccc
Confidence            999999998755433211 111224578889999999987665554      999999999999999 9          7


Q ss_pred             CCCCCC
Q psy3166         199 NPYPHI  204 (228)
Q Consensus       199 ~pf~~~  204 (228)
                      .||...
T Consensus       260 ~p~~~~  265 (337)
T 3mdy_A          260 LPYHDL  265 (337)
T ss_dssp             CTTTTT
T ss_pred             ccHhhh
Confidence            787653


No 238
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=8.6e-34  Score=234.90  Aligned_cols=180  Identities=22%  Similarity=0.346  Sum_probs=145.8

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcC----------C
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG----------K   76 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~----------~   76 (228)
                      +..++|++.+.||+|+||.||+|..         ..++..||+|.+...  ......+.+|+.+++++.          .
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~---------~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~   84 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAKD---------MVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMG   84 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEE---------TTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHH
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEEe---------cCCCcEEEEEEecCC--ccchhhhhHHHHHHHHhhcccccchhccc
Confidence            4457999999999999999999984         445567999998743  334466788999999883          1


Q ss_pred             CCceEEeeeEEEcC-----ceEEEEecCCCCcHHHHHHH----------------------hcccCC-CCcccCCCCCCE
Q psy3166          77 HDHIVSFIGCCYKD-----ELRLVVEYCALGDLQSYLRE----------------------EYLSNN-KVVHRDLATRNI  128 (228)
Q Consensus        77 h~ni~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~-~i~H~~lk~~ni  128 (228)
                      ||||+++++++...     ..+++||++ +++|.+++..                      .|||++ ||+||||||+||
T Consensus        85 ~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NI  163 (373)
T 1q8y_A           85 ANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV  163 (373)
T ss_dssp             HTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGE
T ss_pred             cchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHe
Confidence            89999999988642     377999999 8899988754                      599998 999999999999


Q ss_pred             eec------CCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q psy3166         129 LLS------SPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYP  202 (228)
Q Consensus       129 l~~------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~  202 (228)
                      +++      ..+.+||+|||++......      .....+|..|+|||++.+..++.++|+|||||++|+|++ |..||.
T Consensus       164 ll~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~pf~  236 (373)
T 1q8y_A          164 LMEIVDSPENLIQIKIADLGNACWYDEH------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT-GDFLFE  236 (373)
T ss_dssp             EEEEEETTTTEEEEEECCCTTCEETTBC------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHH-SSCCC-
T ss_pred             EEeccCCCcCcceEEEcccccccccCCC------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHh-CCCCCC
Confidence            995      3448999999998754322      223567889999999998889999999999999999999 999998


Q ss_pred             CCC
Q psy3166         203 HIP  205 (228)
Q Consensus       203 ~~~  205 (228)
                      +.+
T Consensus       237 ~~~  239 (373)
T 1q8y_A          237 PDE  239 (373)
T ss_dssp             ---
T ss_pred             CCc
Confidence            754


No 239
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=1.9e-33  Score=230.32  Aligned_cols=179  Identities=30%  Similarity=0.510  Sum_probs=145.7

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhc-CCCCceEEeeeEEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDV-GKHDHIVSFIGCCY   88 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~~h~ni~~~~~~~~   88 (228)
                      ++|++.+.||+|+||.||+|.+.           ++.||+|.++..    ....+.+|.+++..+ .+||||+++++++.
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~-----------~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~  106 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWR-----------GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADN  106 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-----------TEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred             ccEEEEeeecCCCCcEEEEEEEc-----------CccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence            68999999999999999999752           456999998643    234567888888873 28999999999987


Q ss_pred             cC-----ceEEEEecCCCCcHHHHHHH-------------------hccc--------CCCCcccCCCCCCEeecCCCcE
Q psy3166          89 KD-----ELRLVVEYCALGDLQSYLRE-------------------EYLS--------NNKVVHRDLATRNILLSSPHVV  136 (228)
Q Consensus        89 ~~-----~~~lv~e~~~~~~L~~~l~~-------------------~~lh--------~~~i~H~~lk~~nil~~~~~~~  136 (228)
                      ..     ..+++|||+++++|.+++..                   .|||        +++|+|+||||+||+++.++.+
T Consensus       107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~  186 (342)
T 1b6c_B          107 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC  186 (342)
T ss_dssp             CCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred             ccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence            64     57899999999999999865                   5899        8999999999999999999999


Q ss_pred             EEeeccCcccccccccc-cCCCCCCCCcceeecccccccCC------CCchhhHHHHHHHHHHHHhCC----------CC
Q psy3166         137 KISDFGLSEDIYEQNVF-QNGEPSEKLPIRWLALESLVSNI------YTNKSDVWSFGVVLWEIVTLG----------AN  199 (228)
Q Consensus       137 kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~~------~~~~~Diwslg~~~~~l~t~g----------~~  199 (228)
                      ||+|||++......... ........++..|+|||.+.+..      ++.++|+||||+++|+|++ |          ..
T Consensus       187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~t-g~~~~~~~~~~~~  265 (342)
T 1b6c_B          187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQL  265 (342)
T ss_dssp             EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHT-TBCBTTBCCCCCC
T ss_pred             EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHh-ccCcCCccccccc
Confidence            99999998755433211 11223456888999999987653      2368999999999999999 8          78


Q ss_pred             CCCCC
Q psy3166         200 PYPHI  204 (228)
Q Consensus       200 pf~~~  204 (228)
                      ||...
T Consensus       266 p~~~~  270 (342)
T 1b6c_B          266 PYYDL  270 (342)
T ss_dssp             TTTTT
T ss_pred             Ccccc
Confidence            98764


No 240
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=4.4e-34  Score=250.63  Aligned_cols=184  Identities=31%  Similarity=0.493  Sum_probs=151.1

Q ss_pred             CCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166           6 GYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus         6 ~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      +...++|++.+.||+|+||.||+|.         +..++..||+|.++..........+.+|+.+++++ +||||+++++
T Consensus        10 g~~~grY~i~~~LG~G~fG~Vyla~---------~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~   79 (676)
T 3qa8_A           10 TQTCGPWEMKERLGTGGFGYVLRWI---------HQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSARE   79 (676)
T ss_dssp             -------CCCCCCCBCSSSBCCCCC---------CTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEE
T ss_pred             CCCCCCeEEEEEEeeCCCeEEEEEE---------ECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceee
Confidence            4556899999999999999999987         44455679999998766666677899999999999 9999999998


Q ss_pred             EEEc-------CceEEEEecCCCCcHHHHHHH-----------------------hcccCCCCcccCCCCCCEeecCCCc
Q psy3166          86 CCYK-------DELRLVVEYCALGDLQSYLRE-----------------------EYLSNNKVVHRDLATRNILLSSPHV  135 (228)
Q Consensus        86 ~~~~-------~~~~lv~e~~~~~~L~~~l~~-----------------------~~lh~~~i~H~~lk~~nil~~~~~~  135 (228)
                      ++..       +..++||||+++++|.+++..                       .|||++||+|+||||+||+++.++.
T Consensus        80 v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~  159 (676)
T 3qa8_A           80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQ  159 (676)
T ss_dssp             CCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSS
T ss_pred             eecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCC
Confidence            8643       347899999999999998763                       5999999999999999999997654


Q ss_pred             ---EEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3166         136 ---VKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHI  204 (228)
Q Consensus       136 ---~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~  204 (228)
                         ++|+|||++........    .....++..|+|||.+.+..++.++|+||+|+++|+|++ |..||.+.
T Consensus       160 ~~~vKL~DFG~a~~~~~~~~----~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~  226 (676)
T 3qa8_A          160 RLIHKIIDLGYAKELDQGEL----CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT-GFRPFLPN  226 (676)
T ss_dssp             SCEEEECSCCCCCBTTSCCC----CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHS-SCSSCCSS
T ss_pred             ceeEEEcccccccccccccc----cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHH-CCCCCCcc
Confidence               99999999876543321    233567888999999998889999999999999999999 99999764


No 241
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=8.4e-34  Score=232.49  Aligned_cols=180  Identities=25%  Similarity=0.426  Sum_probs=122.7

Q ss_pred             CCceeee-eeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166           9 PERLILG-EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus         9 ~~~~~~~-~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      .++|++. +.||+|+||.||+|+..         .+++.||+|.+...  .    ...+|+..+.+..+||||+++++++
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~---------~~~~~vavK~~~~~--~----~~~~e~~~~~~~~~h~~i~~~~~~~   91 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHR---------RTGQKCALKLLYDS--P----KARQEVDHHWQASGGPHIVCILDVY   91 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEET---------TTCCEEEEEEEESS--H----HHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEEC---------CCCCEEEEEEecCc--H----HHHHHHHHHHHhcCCCChHHHHHHH
Confidence            3688885 57999999999999843         44567999998643  1    2233444433444999999999987


Q ss_pred             Ec----C-ceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecC---CCcEE
Q psy3166          88 YK----D-ELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSS---PHVVK  137 (228)
Q Consensus        88 ~~----~-~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~---~~~~k  137 (228)
                      ..    + ..++||||+.+++|.+++..                      .|||+++|+||||||+||+++.   ++.+|
T Consensus        92 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~k  171 (336)
T 3fhr_A           92 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLK  171 (336)
T ss_dssp             EEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEE
T ss_pred             hhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEE
Confidence            54    2 27899999999999998864                      6999999999999999999986   45699


Q ss_pred             EeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy3166         138 ISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLCRI  209 (228)
Q Consensus       138 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~~  209 (228)
                      |+|||++.......     .....++..|+|||++....++.++|+||||+++|+|++ |..||.+......
T Consensus       172 l~Dfg~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~  237 (336)
T 3fhr_A          172 LTDFGFAKETTQNA-----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-GFPPFYSNTGQAI  237 (336)
T ss_dssp             ECCCTTCEEC---------------------------CHHHHHHHHHHHHHHHHHHHH-SSCCC--------
T ss_pred             Eeccccceeccccc-----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHH-CCCCCCCccchhh
Confidence            99999987543221     223466788999999988888899999999999999999 9999987665443


No 242
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=3.3e-33  Score=236.40  Aligned_cols=183  Identities=27%  Similarity=0.387  Sum_probs=139.0

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      +.|.+.+.||+|+||+||.+..          .++..||+|.+....    ...+.+|+.+++++.+||||+++++++..
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~----------~~g~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~   80 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGS----------FQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETT   80 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEE----------SSSSEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             heeeccCeEeeCCCeEEEEEEE----------ECCeEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEec
Confidence            4456678999999999976432          234579999986432    34567899999987689999999998876


Q ss_pred             Cc-eEEEEecCCCCcHHHHHHH---------------------------hcccCCCCcccCCCCCCEeecCC--------
Q psy3166          90 DE-LRLVVEYCALGDLQSYLRE---------------------------EYLSNNKVVHRDLATRNILLSSP--------  133 (228)
Q Consensus        90 ~~-~~lv~e~~~~~~L~~~l~~---------------------------~~lh~~~i~H~~lk~~nil~~~~--------  133 (228)
                      +. .+++||++. |+|.+++..                           .|||+++|+||||||+||+++.+        
T Consensus        81 ~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~  159 (434)
T 2rio_A           81 DRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQ  159 (434)
T ss_dssp             SSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCT
T ss_pred             CCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccc
Confidence            55 789999995 599887642                           59999999999999999999754        


Q ss_pred             -----CcEEEeeccCcccccccccc-cCCCCCCCCcceeeccccccc-------CCCCchhhHHHHHHHHHHHHhCCCCC
Q psy3166         134 -----HVVKISDFGLSEDIYEQNVF-QNGEPSEKLPIRWLALESLVS-------NIYTNKSDVWSFGVVLWEIVTLGANP  200 (228)
Q Consensus       134 -----~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~-------~~~~~~~Diwslg~~~~~l~t~g~~p  200 (228)
                           +.+||+|||++..+...... ........||..|+|||++.+       ..++.++|||||||++|+|++.|..|
T Consensus       160 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~P  239 (434)
T 2rio_A          160 TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP  239 (434)
T ss_dssp             TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCC
Confidence                 48999999999765433211 111223567889999999875       56889999999999999999768999


Q ss_pred             CCCCCHH
Q psy3166         201 YPHIPLC  207 (228)
Q Consensus       201 f~~~~~~  207 (228)
                      |.+....
T Consensus       240 f~~~~~~  246 (434)
T 2rio_A          240 FGDKYSR  246 (434)
T ss_dssp             TCSTTTH
T ss_pred             CCCchhh
Confidence            9875443


No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.8e-33  Score=237.82  Aligned_cols=186  Identities=25%  Similarity=0.348  Sum_probs=139.7

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      +...+|++.+.||+|+||+|+...          ..+++.||||.+.....    ..+.+|+++|+++.+||||++++++
T Consensus        21 i~~~~y~~~~~LG~G~~G~V~~~~----------~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~   86 (432)
T 3p23_A           21 VGKISFCPKDVLGHGAEGTIVYRG----------MFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCT   86 (432)
T ss_dssp             ETTEEEEEEEEEEECGGGCEEEEE----------ESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEE
T ss_pred             EccEEEecCCeeecCcCEEEEEEE----------EeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEE
Confidence            455679999999999999865322          12345699999865422    1245799999999789999999998


Q ss_pred             EEcCc-eEEEEecCCCCcHHHHHHH---------------------hcccCCCCcccCCCCCCEeecC-----CCcEEEe
Q psy3166          87 CYKDE-LRLVVEYCALGDLQSYLRE---------------------EYLSNNKVVHRDLATRNILLSS-----PHVVKIS  139 (228)
Q Consensus        87 ~~~~~-~~lv~e~~~~~~L~~~l~~---------------------~~lh~~~i~H~~lk~~nil~~~-----~~~~kl~  139 (228)
                      +.... .+++||++. |+|.+++..                     .|||+++|+||||||+||+++.     ...+||+
T Consensus        87 ~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~  165 (432)
T 3p23_A           87 EKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMIS  165 (432)
T ss_dssp             EEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEEC
T ss_pred             EecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEe
Confidence            87655 789999996 599888754                     6999999999999999999953     2368899


Q ss_pred             eccCcccccccccccCCCCCCCCcceeeccccccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy3166         140 DFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVS---NIYTNKSDVWSFGVVLWEIVTLGANPYPHIPLC  207 (228)
Q Consensus       140 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~---~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~~  207 (228)
                      |||+++.+..............||..|+|||++..   ..++.++||||+||++|+|++.|..||......
T Consensus       166 DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~  236 (432)
T 3p23_A          166 DFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR  236 (432)
T ss_dssp             CTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH
T ss_pred             cccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH
Confidence            99998765433221122334568889999999873   457789999999999999998788999765443


No 244
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=5.5e-34  Score=253.36  Aligned_cols=176  Identities=20%  Similarity=0.218  Sum_probs=145.4

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .++|++.+.||+|+||.||+|.+..        .+++.||+|.+...........+.+|+.+++++ +||||+++++++.
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~--------~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~  149 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRN--------VNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVE  149 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGG--------GTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcC--------CCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEe
Confidence            3789999999999999999998532        135679999987665566667888999999999 9999999999986


Q ss_pred             cC-c-----eEEEEecCCCCcHHHHHHH------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166          89 KD-E-----LRLVVEYCALGDLQSYLRE------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus        89 ~~-~-----~~lv~e~~~~~~L~~~l~~------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      .. .     .++||||+++++|.+++..                  .|||++||+||||||+||+++.+ .+||+|||++
T Consensus       150 ~~~~~~~~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a  228 (681)
T 2pzi_A          150 HTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAV  228 (681)
T ss_dssp             EECTTSCEEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred             ecCCCCCceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccc
Confidence            53 2     5899999999998876542                  69999999999999999999875 8999999998


Q ss_pred             ccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q psy3166         145 EDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPH  203 (228)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~  203 (228)
                      +.....       ....||..|++||++.+. ++.++|||||||++|+|++ |..||.+
T Consensus       229 ~~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~-g~~~~~~  278 (681)
T 2pzi_A          229 SRINSF-------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTL-DLPTRNG  278 (681)
T ss_dssp             EETTCC-------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHS-CCCEETT
T ss_pred             hhcccC-------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHh-CCCCCcc
Confidence            754322       345678899999988765 4889999999999999998 9888765


No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=3.8e-33  Score=223.84  Aligned_cols=156  Identities=13%  Similarity=0.080  Sum_probs=134.0

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCCCceEEeeeEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKHDHIVSFIGCC   87 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   87 (228)
                      ++|++.+.||+|+||.||+|++         ..+++.||+|.+....  .......+.+|+..+.++ +||||+++++++
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~  100 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALD---------TALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVV  100 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEE---------TTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEe---------cCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEE
Confidence            6799999999999999999984         4455679999997553  245557788999999999 999999999998


Q ss_pred             EcC-ceEEEEecCCCCcHHHHHHH------------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCccccc
Q psy3166          88 YKD-ELRLVVEYCALGDLQSYLRE------------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIY  148 (228)
Q Consensus        88 ~~~-~~~lv~e~~~~~~L~~~l~~------------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~~  148 (228)
                      ..+ ..++||||+.+++|.+++..                  .|||++||+||||||+||+++.++.+||++++      
T Consensus       101 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~------  174 (286)
T 3uqc_A          101 HTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA------  174 (286)
T ss_dssp             EETTEEEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred             EECCcEEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc------
Confidence            765 48899999999999998754                  69999999999999999999999999987443      


Q ss_pred             ccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         149 EQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                                       |++|       ++.++|+|||||++|+|++ |..||.+.+.
T Consensus       175 -----------------~~~~-------~~~~~Di~slG~il~ellt-g~~Pf~~~~~  207 (286)
T 3uqc_A          175 -----------------TMPD-------ANPQDDIRGIGASLYALLV-NRWPLPEAGV  207 (286)
T ss_dssp             -----------------CCTT-------CCHHHHHHHHHHHHHHHHH-SEECSCCCSB
T ss_pred             -----------------ccCC-------CCchhHHHHHHHHHHHHHH-CCCCCCcCCc
Confidence                             2332       6889999999999999999 9999988654


No 246
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=6.3e-34  Score=231.67  Aligned_cols=183  Identities=23%  Similarity=0.383  Sum_probs=148.1

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH-----HHHHHHHHHHHHHHhcC-CCCce
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-----KTYDKFLKEINLMKDVG-KHDHI   80 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~-~h~ni   80 (228)
                      .-.++|++.+.||+|+||.||+|+.         ..++..||+|.++.....     .....+.+|+.+++++. .||||
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i  110 (320)
T 3a99_A           40 PLESQYQVGPLLGSGGFGSVYSGIR---------VSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV  110 (320)
T ss_dssp             CCTTTEEEEEECSSSSSCEEEEEEE---------TTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSB
T ss_pred             CccCceEEEEEEeeCCCeEEEEEEE---------CCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCc
Confidence            4567899999999999999999984         345567999998654211     11234567999999995 26999


Q ss_pred             EEeeeEEEcCc-eEEEEecCCC-CcHHHHHHH--------------------hcccCCCCcccCCCCCCEeec-CCCcEE
Q psy3166          81 VSFIGCCYKDE-LRLVVEYCAL-GDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLS-SPHVVK  137 (228)
Q Consensus        81 ~~~~~~~~~~~-~~lv~e~~~~-~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~-~~~~~k  137 (228)
                      +++++++.... .++++|++.+ ++|.+++..                    .|||+++|+||||||+||+++ .++.+|
T Consensus       111 ~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~k  190 (320)
T 3a99_A          111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK  190 (320)
T ss_dssp             CCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEE
T ss_pred             eEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEE
Confidence            99999987654 7899999865 899988764                    699999999999999999999 678999


Q ss_pred             EeeccCcccccccccccCCCCCCCCcceeecccccccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCC
Q psy3166         138 ISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIY-TNKSDVWSFGVVLWEIVTLGANPYPHI  204 (228)
Q Consensus       138 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Diwslg~~~~~l~t~g~~pf~~~  204 (228)
                      |+|||++.......     .....++..|+|||.+....+ +.++|+||||+++|+|++ |..||...
T Consensus       191 L~Dfg~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~  252 (320)
T 3a99_A          191 LIDFGSGALLKDTV-----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC-GDIPFEHD  252 (320)
T ss_dssp             ECCCTTCEECCSSC-----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH-SSCSCCSH
T ss_pred             EeeCcccccccccc-----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHH-CCCCCCCh
Confidence            99999987553321     223567888999999887665 678899999999999999 99999763


No 247
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.7e-33  Score=228.05  Aligned_cols=181  Identities=26%  Similarity=0.411  Sum_probs=141.7

Q ss_pred             CCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH-----HHHHHHHHHHHHHHhcC---CCCc
Q psy3166           8 PPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-----KTYDKFLKEINLMKDVG---KHDH   79 (228)
Q Consensus         8 ~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~---~h~n   79 (228)
                      -.++|++.+.||+|+||.||+|.         +..++..||+|.++.....     .....+.+|+.+++++.   +|||
T Consensus        29 ~~~~y~~~~~lg~G~~g~Vy~~~---------~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~   99 (312)
T 2iwi_A           29 FEAEYRLGPLLGKGGFGTVFAGH---------RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPG   99 (312)
T ss_dssp             ----CEEEEEEEEETTEEEEEEE---------CTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSS
T ss_pred             hhhceEEeeEEEcCCCEEEEEEE---------EccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCC
Confidence            35689999999999999999997         4445567999998654221     11233557888888874   6999


Q ss_pred             eEEeeeEEEc-CceEEEEec-CCCCcHHHHHHH--------------------hcccCCCCcccCCCCCCEeec-CCCcE
Q psy3166          80 IVSFIGCCYK-DELRLVVEY-CALGDLQSYLRE--------------------EYLSNNKVVHRDLATRNILLS-SPHVV  136 (228)
Q Consensus        80 i~~~~~~~~~-~~~~lv~e~-~~~~~L~~~l~~--------------------~~lh~~~i~H~~lk~~nil~~-~~~~~  136 (228)
                      |+++++++.. +..++++|+ +.+++|.+++..                    .|||+++|+|+||||+||+++ .++.+
T Consensus       100 i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~  179 (312)
T 2iwi_A          100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCA  179 (312)
T ss_dssp             BCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEE
T ss_pred             eeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeE
Confidence            9999998865 457899999 788999998764                    699999999999999999999 78999


Q ss_pred             EEeeccCcccccccccccCCCCCCCCcceeecccccccCCCC-chhhHHHHHHHHHHHHhCCCCCCCC
Q psy3166         137 KISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYT-NKSDVWSFGVVLWEIVTLGANPYPH  203 (228)
Q Consensus       137 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~-~~~Diwslg~~~~~l~t~g~~pf~~  203 (228)
                      +|+|||++.......     .....++..|+|||++.+..+. .++|+||||+++|+|++ |..||..
T Consensus       180 kl~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~  241 (312)
T 2iwi_A          180 KLIDFGSGALLHDEP-----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVC-GDIPFER  241 (312)
T ss_dssp             EECCCSSCEECCSSC-----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH-SSCSCCS
T ss_pred             EEEEcchhhhcccCc-----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHH-CCCCCCC
Confidence            999999987554322     2234577889999998876664 58999999999999999 9999975


No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.98  E-value=1.3e-32  Score=231.36  Aligned_cols=185  Identities=16%  Similarity=0.135  Sum_probs=136.6

Q ss_pred             CCCCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH--HHHHHHHHHHHHHHhcCCC-Cce-
Q psy3166           5 CGYPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA--KTYDKFLKEINLMKDVGKH-DHI-   80 (228)
Q Consensus         5 ~~~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~~h-~ni-   80 (228)
                      ++.+..+|++.+.||+|+||+||+|.+         ..++..||||.++.....  ...+.+.+|+.+++.+ .| .|. 
T Consensus        73 ~~~~~~~~~~~~~LG~G~fG~Vy~a~~---------~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~  142 (413)
T 3dzo_A           73 LGERPRTLVRGTVLGQEDPYAYLEATD---------QETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQK  142 (413)
T ss_dssp             SSSCCEEEEEEEEEEEETTEEEEEEEE---------TTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHH
T ss_pred             CCCCceeEEEecccccCCCEEEEEEEe---------cCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHH
Confidence            456677899999999999999999984         344557999998744222  2346788899999988 55 211 


Q ss_pred             --------------EEe------eeEEEc------CceEEEEecCCCCcHHHHHHH------------------------
Q psy3166          81 --------------VSF------IGCCYK------DELRLVVEYCALGDLQSYLRE------------------------  110 (228)
Q Consensus        81 --------------~~~------~~~~~~------~~~~lv~e~~~~~~L~~~l~~------------------------  110 (228)
                                    +.+      ...+..      ...+++|+.+ +++|.+++..                        
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~  221 (413)
T 3dzo_A          143 QAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVI  221 (413)
T ss_dssp             HHHHHTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHH
Confidence                          111      111111      1255666655 6788887731                        


Q ss_pred             ---hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeeccccc----------ccCCC
Q psy3166         111 ---EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL----------VSNIY  177 (228)
Q Consensus       111 ---~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~----------~~~~~  177 (228)
                         .|||+++|+||||||+|||++.++.+||+|||++......      .....| ..|+|||++          ....+
T Consensus       222 ~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~  294 (413)
T 3dzo_A          222 RLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS------AVSPIG-RGFAPPETTAERMLPFGQHHPTLM  294 (413)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEE
T ss_pred             HHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCc------cccCCC-CceeCchhhhccccccccccCcCC
Confidence               6999999999999999999999999999999998754332      123455 789999998          44457


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy3166         178 TNKSDVWSFGVVLWEIVTLGANPYPHIPLCR  208 (228)
Q Consensus       178 ~~~~Diwslg~~~~~l~t~g~~pf~~~~~~~  208 (228)
                      +.++|+|||||++|+|++ |..||......+
T Consensus       295 ~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~  324 (413)
T 3dzo_A          295 TFAFDTWTLGLAIYWIWC-ADLPNTDDAALG  324 (413)
T ss_dssp             CHHHHHHHHHHHHHHHHH-SSCCCCTTGGGS
T ss_pred             CchhhHHHHHHHHHHHHH-CCCCCCCcchhh
Confidence            889999999999999999 999998865443


No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98  E-value=1.2e-33  Score=231.41  Aligned_cols=176  Identities=22%  Similarity=0.286  Sum_probs=139.3

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC-------CHHHHHHHHHHHHHHHhcC----
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA-------DAKTYDKFLKEINLMKDVG----   75 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~----   75 (228)
                      ++.++|++.+.||+|+||+||+|++           ++..||+|.++...       .......+.+|+.+++.+.    
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~-----------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~   85 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA-----------DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSG   85 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE-----------TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGG
T ss_pred             cccccchheeeecccCceEEEEEEe-----------CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhc
Confidence            5668899999999999999999984           23579999987542       1223467788999998884    


Q ss_pred             ----CCCceEEeeeEEE-------------------------------cCceEEEEecCCCCcHHHHHHH----------
Q psy3166          76 ----KHDHIVSFIGCCY-------------------------------KDELRLVVEYCALGDLQSYLRE----------  110 (228)
Q Consensus        76 ----~h~ni~~~~~~~~-------------------------------~~~~~lv~e~~~~~~L~~~l~~----------  110 (228)
                          .||||+++.+++.                               .+..++||||+++|++.+.+..          
T Consensus        86 ~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~  165 (336)
T 2vuw_A           86 EVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKS  165 (336)
T ss_dssp             CSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHH
T ss_pred             cccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHH
Confidence                3777777776542                               3568999999998865544321          


Q ss_pred             ---------hccc-CCCCcccCCCCCCEeecCCC--------------------cEEEeeccCcccccccccccCCCCCC
Q psy3166         111 ---------EYLS-NNKVVHRDLATRNILLSSPH--------------------VVKISDFGLSEDIYEQNVFQNGEPSE  160 (228)
Q Consensus       111 ---------~~lh-~~~i~H~~lk~~nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~  160 (228)
                               .||| +++|+||||||+|||++.++                    .+||+|||+++.....        ..
T Consensus       166 i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--------~~  237 (336)
T 2vuw_A          166 ILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--------IV  237 (336)
T ss_dssp             HHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--------EE
T ss_pred             HHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--------cE
Confidence                     6999 99999999999999999887                    8999999999755322        23


Q ss_pred             CCcceeecccccccCCCCchhhHHHHHHH-HHHHHhCCCCCCCC
Q psy3166         161 KLPIRWLALESLVSNIYTNKSDVWSFGVV-LWEIVTLGANPYPH  203 (228)
Q Consensus       161 ~~~~~~~~Pe~~~~~~~~~~~Diwslg~~-~~~l~t~g~~pf~~  203 (228)
                      .||..|+|||++.+.. +.++||||++++ .+++++ |..||..
T Consensus       238 ~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~-g~~p~~~  279 (336)
T 2vuw_A          238 VFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWG-EYHPYSN  279 (336)
T ss_dssp             ECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTT-SCCTHHH
T ss_pred             EEeecccChhhhcCCC-ccceehhhhhCCCCccccc-ccCCCcc
Confidence            6778899999998766 889999998776 777887 9999855


No 250
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97  E-value=2.8e-31  Score=214.00  Aligned_cols=160  Identities=26%  Similarity=0.446  Sum_probs=130.0

Q ss_pred             CCCCCceeee-eeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEee
Q psy3166           6 GYPPERLILG-EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFI   84 (228)
Q Consensus         6 ~~~~~~~~~~-~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~   84 (228)
                      +.-.++|.+. +.||+|+||.||+|..         ..++..||+|.++..      ....+|+.++.++.+||||++++
T Consensus        13 ~~~~~~y~~~~~~lg~G~~g~V~~~~~---------~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~   77 (299)
T 3m2w_A           13 NAIIDDYKVTSQVLGLGINGKVLQIFN---------KRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIV   77 (299)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEE---------TTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEE
T ss_pred             cccccchhhcCcccccCCCeEEEEEEE---------cCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHH
Confidence            3445678777 7899999999999984         345567999998643      34567898886666999999999


Q ss_pred             eEEEc-----CceEEEEecCCCCcHHHHHHH----------------------hcccCCCCcccCCCCCCEeecC---CC
Q psy3166          85 GCCYK-----DELRLVVEYCALGDLQSYLRE----------------------EYLSNNKVVHRDLATRNILLSS---PH  134 (228)
Q Consensus        85 ~~~~~-----~~~~lv~e~~~~~~L~~~l~~----------------------~~lh~~~i~H~~lk~~nil~~~---~~  134 (228)
                      +++..     ...++||||+++++|.+++..                      .|||+++|+||||||+||+++.   ++
T Consensus        78 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~  157 (299)
T 3m2w_A           78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA  157 (299)
T ss_dssp             EEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTC
T ss_pred             hhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCC
Confidence            98754     337899999999999998864                      6999999999999999999998   78


Q ss_pred             cEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy3166         135 VVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPYPHIPL  206 (228)
Q Consensus       135 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf~~~~~  206 (228)
                      .++|+|||++....                         +..++.++|+||+||++|+|++ |..||.+...
T Consensus       158 ~~kl~Dfg~a~~~~-------------------------~~~~~~~~DiwslG~il~el~t-g~~pf~~~~~  203 (299)
T 3m2w_A          158 ILKLTDFGFAKETT-------------------------GEKYDKSCDMWSLGVIMYILLC-GYPPFYSNHG  203 (299)
T ss_dssp             CEEECCCTTCEECT-------------------------TCGGGGHHHHHHHHHHHHHHHH-SSCSCCC---
T ss_pred             cEEEeccccccccc-------------------------cccCCchhhHHHHHHHHHHHHH-CCCCCCCCcc
Confidence            89999999875321                         1236778999999999999999 9999976543


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96  E-value=8.9e-31  Score=227.94  Aligned_cols=152  Identities=13%  Similarity=0.043  Sum_probs=108.9

Q ss_pred             CcccceeeeeeccccCC---------CHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEcCc-eEEEEecCCCCcHHHHHH
Q psy3166          40 SGQAAMEVAVKMLKANA---------DAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE-LRLVVEYCALGDLQSYLR  109 (228)
Q Consensus        40 ~~~~~~~vavK~~~~~~---------~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~  109 (228)
                      ....+..||+|.+....         .....+.+.+|+++|+++.+|+||+++++++.++. .|+||||++|++|.+++.
T Consensus       255 r~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~  334 (569)
T 4azs_A          255 RYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLA  334 (569)
T ss_dssp             EEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHH
T ss_pred             cccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHH
Confidence            34466779999986441         12234568899999999988999999999998754 899999999999999987


Q ss_pred             H-----------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeeccccc
Q psy3166         110 E-----------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESL  172 (228)
Q Consensus       110 ~-----------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~  172 (228)
                      .                 .|+|++||+||||||+|||++.+|.+||+|||+++.......   ...+..||+.|++||++
T Consensus       335 ~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~---~~~t~vGTp~YmAPE~l  411 (569)
T 4azs_A          335 AGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS---WPTNLVQSFFVFVNELF  411 (569)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C---CSHHHHHHHHHHHHHHC
T ss_pred             hCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc---cccCceechhhccHHHh
Confidence            5                 699999999999999999999999999999999875533221   12235678999999998


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHh
Q psy3166         173 VSNIYTNKSDVWSFGVVLWEIVT  195 (228)
Q Consensus       173 ~~~~~~~~~Diwslg~~~~~l~t  195 (228)
                      .+. +..++|+|++|++.+++.+
T Consensus       412 ~g~-~~~~~d~~s~g~~~~~l~~  433 (569)
T 4azs_A          412 AEN-KSWNGFWRSAPVHPFNLPQ  433 (569)
T ss_dssp             ------------------CCCCT
T ss_pred             CCC-CCCcccccccccchhhhcc
Confidence            764 5667999999998776544


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92  E-value=2.2e-26  Score=199.30  Aligned_cols=174  Identities=19%  Similarity=0.141  Sum_probs=123.9

Q ss_pred             eeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CH-----HHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166          14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DA-----KTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus        14 ~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      -.+.||+|+||+||+|...+           ..+++|......  ..     ...+++.+|+++|+++ +||||+.+..+
T Consensus       340 ~~~~LG~G~fg~Vy~~~~~~-----------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~  407 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSYLD-----------FDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIF  407 (540)
T ss_dssp             --------CCEEEEEEECSS-----------CEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEE
T ss_pred             CCCEEeeCCCEEEEEEEECC-----------CeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEE
Confidence            35799999999999985322           247777754321  11     1234578999999999 99999944333


Q ss_pred             E-EcCceEEEEecCCCCcHHHHHHH------------hcccCCCCcccCCCCCCEeecCCCcEEEeeccCcccccccccc
Q psy3166          87 C-YKDELRLVVEYCALGDLQSYLRE------------EYLSNNKVVHRDLATRNILLSSPHVVKISDFGLSEDIYEQNVF  153 (228)
Q Consensus        87 ~-~~~~~~lv~e~~~~~~L~~~l~~------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~  153 (228)
                      + ..+..++||||+++++|.+++..            .|||+++|+||||||+|||++.  .+||+|||+++........
T Consensus       408 ~~~~~~~~lVmE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~  485 (540)
T 3en9_A          408 DVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDK  485 (540)
T ss_dssp             EEETTTTEEEEECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHH
T ss_pred             EEeCCccEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCcccc
Confidence            3 44568999999999999988653            7999999999999999999998  9999999999865432110


Q ss_pred             c----CCCCCCCCcceeeccccccc--CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q psy3166         154 Q----NGEPSEKLPIRWLALESLVS--NIYTNKSDVWSFGVVLWEIVTLGANPYP  202 (228)
Q Consensus       154 ~----~~~~~~~~~~~~~~Pe~~~~--~~~~~~~Diwslg~~~~~l~t~g~~pf~  202 (228)
                      .    .......||+.|+|||++..  ..|+...|+|+..+-..+... ++.+|.
T Consensus       486 ~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~-~r~rY~  539 (540)
T 3en9_A          486 AVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVE-RRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHH-TCSCCC
T ss_pred             ccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-hccccC
Confidence            0    00123467888999999986  557778899999987777776 666653


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88  E-value=1.6e-23  Score=167.42  Aligned_cols=117  Identities=20%  Similarity=0.250  Sum_probs=92.8

Q ss_pred             eeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCH-----------------HHHHHHHHHHHHHHhcC
Q psy3166          13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADA-----------------KTYDKFLKEINLMKDVG   75 (228)
Q Consensus        13 ~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~e~~~l~~l~   75 (228)
                      .+.+.||+|+||.||+|.+          .++..||+|.++.....                 .....+.+|+.+++++ 
T Consensus        93 ~~~~~iG~G~~g~Vy~~~~----------~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l-  161 (282)
T 1zar_A           93 AIGKLMGEGKESAVFNCYS----------EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-  161 (282)
T ss_dssp             EEEEEEEECSSEEEEEEEE----------TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-
T ss_pred             EecCEeccCCCceEEEEEe----------CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc-
Confidence            3449999999999999985          23457999998643211                 1345688999999999 


Q ss_pred             CCCceEEeeeEEEcCceEEEEecCCCCcHHHHHHH--------------hcccCCCCcccCCCCCCEeecCCCcEEEeec
Q psy3166          76 KHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLRE--------------EYLSNNKVVHRDLATRNILLSSPHVVKISDF  141 (228)
Q Consensus        76 ~h~ni~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------------~~lh~~~i~H~~lk~~nil~~~~~~~kl~df  141 (228)
                      +|   +.+.+++..+..++||||+++++|.+ +..              .|||++||+||||||+|||++ ++.+||+||
T Consensus       162 ~~---~~v~~~~~~~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DF  236 (282)
T 1zar_A          162 QG---LAVPKVYAWEGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDF  236 (282)
T ss_dssp             TT---SSSCCEEEEETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCC
T ss_pred             cC---CCcCeEEeccceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEEC
Confidence            44   55555555567899999999988876 211              799999999999999999999 999999999


Q ss_pred             cCcc
Q psy3166         142 GLSE  145 (228)
Q Consensus       142 g~~~  145 (228)
                      |++.
T Consensus       237 G~a~  240 (282)
T 1zar_A          237 PQSV  240 (282)
T ss_dssp             TTCE
T ss_pred             CCCe
Confidence            9886


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77  E-value=1e-18  Score=137.76  Aligned_cols=121  Identities=21%  Similarity=0.191  Sum_probs=89.4

Q ss_pred             ceeeeeeeeeecCceEEEeeecCCCCCCCCccccee--eeeeccccCCCH-----------------------HHHHHHH
Q psy3166          11 RLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAME--VAVKMLKANADA-----------------------KTYDKFL   65 (228)
Q Consensus        11 ~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~--vavK~~~~~~~~-----------------------~~~~~~~   65 (228)
                      -|++...||+|+||.||+|..         ..++..  ||+|.++.....                       .....+.
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~---------~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADG---------VFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTE  118 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEE---------EETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEE---------cCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHH
Confidence            468999999999999999974         234456  999986543110                       1123577


Q ss_pred             HHHHHHHhcCCCCce--EEeeeEEEcCceEEEEecCCC-C----cHHHHHHH-----------------hccc-CCCCcc
Q psy3166          66 KEINLMKDVGKHDHI--VSFIGCCYKDELRLVVEYCAL-G----DLQSYLRE-----------------EYLS-NNKVVH  120 (228)
Q Consensus        66 ~e~~~l~~l~~h~ni--~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~-----------------~~lh-~~~i~H  120 (228)
                      +|+.+|.++ .|+++  ...+.   .+..++||||+.+ |    +|.+....                 .+|| +.||+|
T Consensus       119 ~E~~~l~~l-~~~~i~~p~~~~---~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givH  194 (258)
T 1zth_A          119 KEFRNLERA-KEAGVSVPQPYT---YMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVH  194 (258)
T ss_dssp             HHHHHHHHH-HHTTCCCCCEEE---EETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEEC
T ss_pred             HHHHHHHHH-HhCCCCCCeEEE---cCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence            899999999 66653  33332   2467899999942 3    66655321                 6899 999999


Q ss_pred             cCCCCCCEeecCCCcEEEeeccCccc
Q psy3166         121 RDLATRNILLSSPHVVKISDFGLSED  146 (228)
Q Consensus       121 ~~lk~~nil~~~~~~~kl~dfg~~~~  146 (228)
                      |||||+|||++.  .++|+|||++..
T Consensus       195 rDlkp~NILl~~--~~~liDFG~a~~  218 (258)
T 1zth_A          195 ADLSEYNIMYID--KVYFIDMGQAVT  218 (258)
T ss_dssp             SSCSTTSEEESS--SEEECCCTTCEE
T ss_pred             CCCCHHHEEEcC--cEEEEECccccc
Confidence            999999999998  899999999863


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60  E-value=2.1e-16  Score=130.37  Aligned_cols=122  Identities=14%  Similarity=0.139  Sum_probs=84.8

Q ss_pred             ceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC----------------CHH-----HHHHHHHHHH
Q psy3166          11 RLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA----------------DAK-----TYDKFLKEIN   69 (228)
Q Consensus        11 ~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~-----~~~~~~~e~~   69 (228)
                      -|++...||+|++|.||+|...          .++.||+|+++...                ...     ......+|..
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~----------~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~  165 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADE----------KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFA  165 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECT----------TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCEeeeCCceEEEEEECC----------CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence            4889999999999999999743          24469999865320                000     1112345778


Q ss_pred             HHHhcCCCCceEEeeeEEEcCceEEEEecCCCCcHHHHHH---------H-----hcccCCCCcccCCCCCCEeecCCC-
Q psy3166          70 LMKDVGKHDHIVSFIGCCYKDELRLVVEYCALGDLQSYLR---------E-----EYLSNNKVVHRDLATRNILLSSPH-  134 (228)
Q Consensus        70 ~l~~l~~h~ni~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---------~-----~~lh~~~i~H~~lk~~nil~~~~~-  134 (228)
                      .|.++ .+..+. +...+.....++||||+.|++|.+...         +     .++|+.||+||||||.|||++.++ 
T Consensus       166 nL~rL-~~~gv~-vp~p~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd  243 (397)
T 4gyi_A          166 FMKAL-YEEGFP-VPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKD  243 (397)
T ss_dssp             HHHHH-HHTTCS-CCCEEEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEEC
T ss_pred             HHHHH-HhcCCC-CCeeeeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCC
Confidence            88887 443332 222222334579999998877754321         1     689999999999999999998766 


Q ss_pred             ---------cEEEeeccCc
Q psy3166         135 ---------VVKISDFGLS  144 (228)
Q Consensus       135 ---------~~kl~dfg~~  144 (228)
                               .+.|+||+-+
T Consensus       244 ~~d~~~~~~~~~iID~~Q~  262 (397)
T 4gyi_A          244 AEDPSSITLTPIIIXFPQM  262 (397)
T ss_dssp             SSCTTSEEEEEEECCCTTC
T ss_pred             cccccccccceEEEEeCCc
Confidence                     3889999965


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.03  E-value=2.9e-10  Score=89.18  Aligned_cols=124  Identities=15%  Similarity=0.018  Sum_probs=90.6

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ..|++...++.|+.+.||++...           +..+++|....... .....+.+|..+++.+..+..+.+++++...
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~-----------~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~   81 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE-----------NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERH   81 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS-----------SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECC-----------CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence            36888888998999999997632           23589999764211 1123467899999999667778888887665


Q ss_pred             C-ceEEEEecCCCCcHHHHH----------HH-----hcccC--------------------------------------
Q psy3166          90 D-ELRLVVEYCALGDLQSYL----------RE-----EYLSN--------------------------------------  115 (228)
Q Consensus        90 ~-~~~lv~e~~~~~~L~~~l----------~~-----~~lh~--------------------------------------  115 (228)
                      . ..+++||+++|.++.+.+          ..     ..||+                                      
T Consensus        82 ~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (263)
T 3tm0_A           82 DGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED  161 (263)
T ss_dssp             TTEEEEEEECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred             CCceEEEEEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence            4 478999999998887641          11     34444                                      


Q ss_pred             ---------------------CCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166         116 ---------------------NKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus       116 ---------------------~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                                           ..++|+|+++.||+++..+.+.|+||+.+.
T Consensus       162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                 347899999999999875556799998653


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.89  E-value=3.8e-09  Score=82.27  Aligned_cols=121  Identities=13%  Similarity=0.017  Sum_probs=80.3

Q ss_pred             ceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCc-eEEeeeEEEc
Q psy3166          11 RLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDH-IVSFIGCCYK   89 (228)
Q Consensus        11 ~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~n-i~~~~~~~~~   89 (228)
                      .+.+....+.|..+.||++...+          +..+++|......    ...+.+|..+++.+..+.- +.+++.+...
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~~----------g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~   86 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQG----------RPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTE   86 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTT----------SCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEEC
T ss_pred             CCceEecccCCCCceEEEEecCC----------CCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccC
Confidence            45554444456668999985322          2348999875431    1345679999998844422 5567776654


Q ss_pred             -CceEEEEecCCCCcHH-------HHHHH-----hcccCC----------------------------------------
Q psy3166          90 -DELRLVVEYCALGDLQ-------SYLRE-----EYLSNN----------------------------------------  116 (228)
Q Consensus        90 -~~~~lv~e~~~~~~L~-------~~l~~-----~~lh~~----------------------------------------  116 (228)
                       +..+++||+++|.++.       .....     ..+|+.                                        
T Consensus        87 ~~~~~~v~e~i~G~~l~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (264)
T 1nd4_A           87 AGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA  166 (264)
T ss_dssp             SSCEEEEEECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred             CCCCEEEEEecCCcccCcCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence             3478999999987774       11111     233432                                        


Q ss_pred             ------------------CCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166         117 ------------------KVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus       117 ------------------~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                                        .++|+|++|.||+++.++.+.|+||+.+.
T Consensus       167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                              28999999999999876666799999764


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.65  E-value=6.5e-08  Score=79.26  Aligned_cols=80  Identities=10%  Similarity=0.087  Sum_probs=51.8

Q ss_pred             eeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccc--cCCCHHHHHHHHHHHHHHHhcCC-CCceEEeeeEEEcC
Q psy3166          14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLK--ANADAKTYDKFLKEINLMKDVGK-HDHIVSFIGCCYKD   90 (228)
Q Consensus        14 ~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~e~~~l~~l~~-h~ni~~~~~~~~~~   90 (228)
                      -.+.|+.|.++.||+....+           ..+++|...  ..........+.+|..+++.+.. +..+.+++..+...
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~-----------~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~  110 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPG-----------QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE  110 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSS-----------CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT
T ss_pred             eEEEcCCcccceEEEEEECC-----------ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC
Confidence            45678899999999976422           248888875  33222223467789999999943 34577777766543


Q ss_pred             ----ceEEEEecCCCCcH
Q psy3166          91 ----ELRLVVEYCALGDL  104 (228)
Q Consensus        91 ----~~~lv~e~~~~~~L  104 (228)
                          ..++|||+++|.++
T Consensus       111 ~~~g~~~~vme~v~G~~l  128 (359)
T 3dxp_A          111 SVIGRAFYIMEFVSGRVL  128 (359)
T ss_dssp             TTTSSCEEEEECCCCBCC
T ss_pred             CccCCeEEEEEecCCeec
Confidence                37899999987655


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.06  E-value=3.1e-06  Score=67.56  Aligned_cols=74  Identities=15%  Similarity=0.080  Sum_probs=48.2

Q ss_pred             eeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCc--eEEeeeEEEcCc-
Q psy3166          15 GEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDH--IVSFIGCCYKDE-   91 (228)
Q Consensus        15 ~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~n--i~~~~~~~~~~~-   91 (228)
                      .+.++.|....||+..              ..+++|....   ......+.+|..+|+.+..+..  +..++.....+. 
T Consensus        25 i~~~~~G~~n~v~~v~--------------~~~vlR~~~~---~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~   87 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN--------------RDFIFKFPKH---SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSET   87 (304)
T ss_dssp             CCEEEECSSEEEEEST--------------TSEEEEEESS---HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSS
T ss_pred             eEecCCCCcceEEEEC--------------CEEEEEecCC---cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCC
Confidence            3568999999999852              1388887542   2344677889999988844432  333333322222 


Q ss_pred             ---eEEEEecCCCCcHH
Q psy3166          92 ---LRLVVEYCALGDLQ  105 (228)
Q Consensus        92 ---~~lv~e~~~~~~L~  105 (228)
                         .|+||++++|.++.
T Consensus        88 ~~~~~~vm~~i~G~~l~  104 (304)
T 3sg8_A           88 YQMSFAGFTKIKGVPLT  104 (304)
T ss_dssp             CSCSCEEEECCCCEECC
T ss_pred             CCcceEEEcccCCeECC
Confidence               47899999887664


No 260
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.88  E-value=0.00017  Score=56.22  Aligned_cols=78  Identities=12%  Similarity=-0.017  Sum_probs=50.0

Q ss_pred             eeeeecCc-eEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEc-CceEE
Q psy3166          17 VLGQGEFG-VVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYK-DELRL   94 (228)
Q Consensus        17 ~ig~g~~~-~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~-~~~~l   94 (228)
                      .+..|..+ .||+.....         .+..+.+|.-...    ....+.+|...|+.+..+--+.+++.++.. +..++
T Consensus        31 ~~~~G~S~~~v~rl~~~~---------~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~l   97 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKP---------NAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWL   97 (272)
T ss_dssp             EEECSSSSCEEEEEECCT---------TCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             EccCCCcCCeEEEEEecC---------CCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEE
Confidence            34445554 588765322         2234788875422    234567899999988655456667766654 44789


Q ss_pred             EEecCCCCcHHHH
Q psy3166          95 VVEYCALGDLQSY  107 (228)
Q Consensus        95 v~e~~~~~~L~~~  107 (228)
                      |||+++|.++.+.
T Consensus        98 vme~l~G~~~~~~  110 (272)
T 4gkh_A           98 LTTAIPGKTAFQV  110 (272)
T ss_dssp             EEECCCSEEHHHH
T ss_pred             EEEeeCCcccccc
Confidence            9999998776553


No 261
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.83  E-value=8.5e-05  Score=59.68  Aligned_cols=72  Identities=13%  Similarity=0.043  Sum_probs=48.6

Q ss_pred             eeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCC--C-CceEEeeeEEEcC
Q psy3166          14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGK--H-DHIVSFIGCCYKD   90 (228)
Q Consensus        14 ~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~--h-~ni~~~~~~~~~~   90 (228)
                      -.+.++.|..+.||+.   +           ..+++|....   ......+.+|..+|..+..  . ..+.++++.   +
T Consensus        41 ~v~~l~~G~~n~vy~v---g-----------~~~vlR~~~~---~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---~  100 (320)
T 3r70_A           41 ELRYLSSGDDSDTFLC---N-----------EQYVVKVPKR---DSVRISQKRELELYRFLENCKLSYQIPAVVYQ---S  100 (320)
T ss_dssp             CEEEEEECSSEEEEEE---T-----------TTEEEEEESS---HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---C
T ss_pred             EEEeCCCCCCceEEEE---C-----------CEEEEEeCCc---HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec---C
Confidence            4567899999999986   1           1388887642   2223457889999998833  1 233444443   5


Q ss_pred             ceEEEEecCCCCcHH
Q psy3166          91 ELRLVVEYCALGDLQ  105 (228)
Q Consensus        91 ~~~lv~e~~~~~~L~  105 (228)
                      ..+++||+++|.++.
T Consensus       101 ~~~lvme~i~G~~l~  115 (320)
T 3r70_A          101 DRFNIMKYIKGERIT  115 (320)
T ss_dssp             SSCEEEECCCCBCCC
T ss_pred             CcEEEEeecCCcccc
Confidence            678999999887664


No 262
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.83  E-value=6.2e-05  Score=59.74  Aligned_cols=79  Identities=19%  Similarity=0.156  Sum_probs=53.9

Q ss_pred             eeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCC--CceEEeeeEEEc
Q psy3166          12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH--DHIVSFIGCCYK   89 (228)
Q Consensus        12 ~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h--~ni~~~~~~~~~   89 (228)
                      ..-.+.|+.|.++.||++...++          ..+++|...... ......+.+|.+.|+.+..+  ..+.+++.+   
T Consensus        17 ~~~~~~l~gG~~n~vy~v~~~dG----------~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~---   82 (288)
T 3d1u_A           17 VAAVAERGHSHRWHLYRVELADG----------TPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGW---   82 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTS----------CEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---
T ss_pred             ccceeeeCCcchhheEEEEeCCC----------CeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEe---
Confidence            34567899999999999875332          258999864321 11224678899999999432  256666654   


Q ss_pred             CceEEEEecCCCCcH
Q psy3166          90 DELRLVVEYCALGDL  104 (228)
Q Consensus        90 ~~~~lv~e~~~~~~L  104 (228)
                      +..+++||+++++++
T Consensus        83 ~~~~lvme~l~g~~~   97 (288)
T 3d1u_A           83 DDRTLAMEWVDERPP   97 (288)
T ss_dssp             ETTEEEEECCCCCCC
T ss_pred             cCcEEEEEecccCCC
Confidence            246899999987653


No 263
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.53  E-value=0.00018  Score=59.48  Aligned_cols=78  Identities=15%  Similarity=0.101  Sum_probs=47.4

Q ss_pred             eeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCC------HHHHHHHHHHHHHHHhcCCC-C-ceEEeee
Q psy3166          14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANAD------AKTYDKFLKEINLMKDVGKH-D-HIVSFIG   85 (228)
Q Consensus        14 ~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~~h-~-ni~~~~~   85 (228)
                      -.+.||.|..+.||++....         .+..+++|.......      .....+...|.++|+.+..+ + .+..++.
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~---------~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~  104 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQE---------HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY  104 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC-------------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE
T ss_pred             EEEECCCCceEEEEEEEECC---------CCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEE
Confidence            45689999999999986322         223589997643211      01123456788888877332 3 3445544


Q ss_pred             EEEcCceEEEEecCCC
Q psy3166          86 CCYKDELRLVVEYCAL  101 (228)
Q Consensus        86 ~~~~~~~~lv~e~~~~  101 (228)
                      + ..+..++|||++++
T Consensus       105 ~-d~~~~~lvmE~l~g  119 (397)
T 2olc_A          105 S-DTEMAVTVMEDLSH  119 (397)
T ss_dssp             E-ETTTTEEEECCCTT
T ss_pred             E-cCCccEEEEEeCCC
Confidence            3 44557899999976


No 264
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.26  E-value=0.00083  Score=52.95  Aligned_cols=80  Identities=19%  Similarity=0.136  Sum_probs=51.2

Q ss_pred             CceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCC--ceEEeeeEE
Q psy3166          10 ERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHD--HIVSFIGCC   87 (228)
Q Consensus        10 ~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~--ni~~~~~~~   87 (228)
                      ....-.+.+|.|..+.||+.+..++          +.|.+|...... ......+..|...|+.|....  .+.+++.  
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~DG----------~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~--   81 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELADG----------TPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAG--   81 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTS----------CEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEE--
T ss_pred             CCeEEEEecCCCCCeEEEEEEECCC----------CEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEe--
Confidence            4556678899999999999876443          358889764332 112235678999998884331  2333333  


Q ss_pred             EcCceEEEEecCCCCc
Q psy3166          88 YKDELRLVVEYCALGD  103 (228)
Q Consensus        88 ~~~~~~lv~e~~~~~~  103 (228)
                       .+.-+++||++.++.
T Consensus        82 -~~~~~lv~e~l~~~~   96 (288)
T 3f7w_A           82 -WDDRTLAMEWVDERP   96 (288)
T ss_dssp             -EETTEEEEECCCCCC
T ss_pred             -ccCceEEEEeecccC
Confidence             234578899986543


No 265
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.23  E-value=0.0038  Score=49.69  Aligned_cols=75  Identities=16%  Similarity=0.065  Sum_probs=49.9

Q ss_pred             eeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCC-C-ceEEeeeEEE--cC
Q psy3166          15 GEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH-D-HIVSFIGCCY--KD   90 (228)
Q Consensus        15 ~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h-~-ni~~~~~~~~--~~   90 (228)
                      .+.++.|....||+.   +           ..+++|+..   .......+.+|..+|..+..+ + .+..+..+..  .+
T Consensus        24 v~~l~~G~~n~v~~v---g-----------~~~VlR~~~---~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g   86 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---N-----------GDWVFRFPK---SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDG   86 (306)
T ss_dssp             EEEEEECSSEEEEEE---T-----------TTEEEEEES---SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTS
T ss_pred             eeecCCCcceeEEEE---C-----------CEEEEEecC---CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCC
Confidence            356788888899985   1           138888743   233456788999999999544 2 2445444443  23


Q ss_pred             ceEEEEecCCCCcHHH
Q psy3166          91 ELRLVVEYCALGDLQS  106 (228)
Q Consensus        91 ~~~lv~e~~~~~~L~~  106 (228)
                      ..+++|++++|.++.+
T Consensus        87 ~~~~v~e~i~G~~l~~  102 (306)
T 3tdw_A           87 NPFVGYRKVQGQILGE  102 (306)
T ss_dssp             CEEEEEECCCSEECHH
T ss_pred             ceEEEEeccCCeECch
Confidence            3789999998877654


No 266
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.03  E-value=0.004  Score=50.87  Aligned_cols=75  Identities=12%  Similarity=0.001  Sum_probs=49.8

Q ss_pred             eeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCC-ceEEeeeEEEc--
Q psy3166          13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHD-HIVSFIGCCYK--   89 (228)
Q Consensus        13 ~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~-ni~~~~~~~~~--   89 (228)
                      .-.+.++.|....+|+....           +..+++|.....      ..+..|..++..+..+. .+.+++.....  
T Consensus        44 ~~i~~l~gG~~n~~y~v~~~-----------g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~  106 (362)
T 3ovc_A           44 SDLMQLSEGEESRAFSFDVG-----------GRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSE  106 (362)
T ss_dssp             EEEEEEEECSSEEEEEEEET-----------TEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS
T ss_pred             ceEEECCCCCcceEEEEEEC-----------CcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCC
Confidence            34567889999999987532           235888876432      24678888998884432 24555555443  


Q ss_pred             CceEEEEecCCCCcH
Q psy3166          90 DELRLVVEYCALGDL  104 (228)
Q Consensus        90 ~~~~lv~e~~~~~~L  104 (228)
                      +..+++||+++|.++
T Consensus       107 g~~~lv~e~l~G~~l  121 (362)
T 3ovc_A          107 SLTYCISRRAQGVTL  121 (362)
T ss_dssp             SCEEEEEECCCSEET
T ss_pred             CCeEEEEEecCCCCc
Confidence            347899999986544


No 267
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.57  E-value=0.0072  Score=50.24  Aligned_cols=30  Identities=20%  Similarity=0.356  Sum_probs=25.8

Q ss_pred             CCCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166         115 NNKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus       115 ~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      ...++|+|+++.||+++.++ +.++||+.+.
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~  260 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSF  260 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCE
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccc
Confidence            34578999999999998776 9999999765


No 268
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.51  E-value=0.0075  Score=48.22  Aligned_cols=75  Identities=17%  Similarity=0.044  Sum_probs=52.1

Q ss_pred             eeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCC--CceEEeeeEEEc-C
Q psy3166          14 LGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKH--DHIVSFIGCCYK-D   90 (228)
Q Consensus        14 ~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h--~ni~~~~~~~~~-~   90 (228)
                      -.+.|+.|....+|+....           +..+++|.....    ....+..|...|+.|...  ..+++++..... +
T Consensus        40 ~~~~l~gG~~n~~y~v~~~-----------~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g  104 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDE-----------VQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG  104 (312)
T ss_dssp             EEEEECCSSSSEEEEEESS-----------SCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS
T ss_pred             eeEEeCCccceeeeEEEEC-----------CCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC
Confidence            4567899999999997632           224888876532    245677898888887433  466777666544 4


Q ss_pred             ceEEEEecCCCCc
Q psy3166          91 ELRLVVEYCALGD  103 (228)
Q Consensus        91 ~~~lv~e~~~~~~  103 (228)
                      ..+++||++++..
T Consensus       105 ~~~lvme~l~G~~  117 (312)
T 3jr1_A          105 HSFLLLEALNKSK  117 (312)
T ss_dssp             EEEEEEECCCCCC
T ss_pred             ceEEEEEeccCCC
Confidence            4789999998764


No 269
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=96.11  E-value=0.0025  Score=51.62  Aligned_cols=89  Identities=6%  Similarity=-0.046  Sum_probs=50.1

Q ss_pred             eeeeeee-eeecCceEEEeeecCCCCCCCCcccceeeeeeccccCC--CHHHHHHHHHHHHHHHhcCCC--CceEEeeeE
Q psy3166          12 LILGEVL-GQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANA--DAKTYDKFLKEINLMKDVGKH--DHIVSFIGC   86 (228)
Q Consensus        12 ~~~~~~i-g~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~h--~ni~~~~~~   86 (228)
                      ....+.| +.|..+.+|+........   ....+..+++|......  .......+.+|..+++.+..+  -.+.+++.+
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~---~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~   98 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQD---GRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWI   98 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEET---TEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEE
T ss_pred             eEEEEECCCCCccceEEEEEEecccC---CCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEE
Confidence            3445677 788888999875320000   00013458888764321  000013456788888887444  346666666


Q ss_pred             EEcC----ceEEEEecCCCCc
Q psy3166          87 CYKD----ELRLVVEYCALGD  103 (228)
Q Consensus        87 ~~~~----~~~lv~e~~~~~~  103 (228)
                      ....    ..+++||+++|.+
T Consensus        99 ~~~~~~~g~~~~v~e~l~G~~  119 (357)
T 3ats_A           99 ETTGDVLGTPFFLMDYVEGVV  119 (357)
T ss_dssp             ECSSTTTSSCEEEEECCCCBC
T ss_pred             ccCCCccCCceEEEEecCCCC
Confidence            5443    3578999997643


No 270
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.04  E-value=0.053  Score=44.50  Aligned_cols=89  Identities=16%  Similarity=0.163  Sum_probs=47.2

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      ++.+.+++ +.+..|-...+|++...++...  ....+..+.+|+.-...  .......+|..+++.+..+.-..++++.
T Consensus        48 ~~~~~l~v-~~lsGG~TN~~y~v~~~~~~~~--~~~~~~~~vlR~~g~~~--~~~~~~~rE~~vl~~L~~~gv~P~ll~~  122 (379)
T 3feg_A           48 VQPEELRV-YPVSGGLSNLLFRCSLPDHLPS--VGEEPREVLLRLYGAIL--QGVDSLVLESVMFAILAERSLGPQLYGV  122 (379)
T ss_dssp             CCGGGCCC-EEC-----CCEEEEECCTTSCC--CSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEE
T ss_pred             CCcCceEE-EEcCCcccccEEEEEeCCCccc--cCCCCCeEEEEECCCcc--chHHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            45566664 4566677788999875431100  01123468888753221  1223455899988887555445666655


Q ss_pred             EEcCceEEEEecCCCCc
Q psy3166          87 CYKDELRLVVEYCALGD  103 (228)
Q Consensus        87 ~~~~~~~lv~e~~~~~~  103 (228)
                      +..   -+|||+++|.+
T Consensus       123 ~~~---g~v~e~i~G~~  136 (379)
T 3feg_A          123 FPE---GRLEQYIPSRP  136 (379)
T ss_dssp             ETT---EEEEECCSEEE
T ss_pred             cCC---ccEEEEecCcc
Confidence            433   28889987643


No 271
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=94.50  E-value=0.036  Score=43.68  Aligned_cols=75  Identities=11%  Similarity=0.086  Sum_probs=42.9

Q ss_pred             eeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEcCc
Q psy3166          12 LILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDE   91 (228)
Q Consensus        12 ~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~   91 (228)
                      +.-.+.|+.|....+|+.    .           .+.+|+.......  .....+|..+++.+..+.-..+++.. ..+.
T Consensus        20 ~~~i~~l~gG~tN~~~~~----~-----------~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~-~~~~   81 (301)
T 3dxq_A           20 YTGPLERLGGLTNLVFRA----G-----------DLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV-DPAT   81 (301)
T ss_dssp             CCSCEEEESCSSEEEEEE----T-----------TEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE-CTTT
T ss_pred             ccceeEcCCcccccccee----e-----------eEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE-ECCC
Confidence            333788888999999986    1           2788876543111  11223577777766333322444443 2334


Q ss_pred             eEEEEecC-CCCcH
Q psy3166          92 LRLVVEYC-ALGDL  104 (228)
Q Consensus        92 ~~lv~e~~-~~~~L  104 (228)
                      -++++|++ ++.++
T Consensus        82 ~~~v~e~i~~g~~l   95 (301)
T 3dxq_A           82 GVMVTRYIAGAQTM   95 (301)
T ss_dssp             CCEEEECCTTCEEC
T ss_pred             CEEEEeecCCCccC
Confidence            57889999 55433


No 272
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=92.32  E-value=0.062  Score=42.78  Aligned_cols=31  Identities=23%  Similarity=0.348  Sum_probs=27.2

Q ss_pred             CCCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166         115 NNKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus       115 ~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      ...++|+|+.+.||+++.++.+.++||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            3678999999999999877889999999764


No 273
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=88.89  E-value=0.12  Score=40.79  Aligned_cols=30  Identities=23%  Similarity=0.379  Sum_probs=25.1

Q ss_pred             CCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166         116 NKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus       116 ~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      .+++|+|+.+.||+++.++.+-++||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            358899999999999876656799998764


No 274
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=87.00  E-value=0.25  Score=39.27  Aligned_cols=30  Identities=30%  Similarity=0.399  Sum_probs=25.7

Q ss_pred             CCCcccCCCCCCEeecCC----CcEEEeeccCcc
Q psy3166         116 NKVVHRDLATRNILLSSP----HVVKISDFGLSE  145 (228)
Q Consensus       116 ~~i~H~~lk~~nil~~~~----~~~kl~dfg~~~  145 (228)
                      ..++|+|+.+.||+++.+    +.+.++||+.+.
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~  216 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK  216 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence            468999999999999874    678999999764


No 275
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.96  E-value=0.079  Score=44.68  Aligned_cols=63  Identities=10%  Similarity=0.065  Sum_probs=17.0

Q ss_pred             eeeeeeeeecCceEEEeeecCCCCCCCCcccceeeee------eccccCC-CHHHHHHHHHHHHHHHhcCCCCceEEeee
Q psy3166          13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAV------KMLKANA-DAKTYDKFLKEINLMKDVGKHDHIVSFIG   85 (228)
Q Consensus        13 ~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vav------K~~~~~~-~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   85 (228)
                      .+.+.||   ||+||+|.+...         ..+||+      |..+... .......+.+|..+++.+ +|||+++.+.
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~---------~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~-~H~niv~~h~  211 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKK---------HMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENE-QIPKYEKIHN  211 (463)
T ss_dssp             CSTTTSS---BCCC------------------CCBGGGC------------------------------------CBCCC
T ss_pred             cccccCC---chhhhccccccc---------CCchhhhhccCccccccccccccccccccccccccccc-cccccCCCcc
Confidence            3455666   999999986432         225788      6554322 223334577788888888 9999999987


Q ss_pred             EEE
Q psy3166          86 CCY   88 (228)
Q Consensus        86 ~~~   88 (228)
                      +..
T Consensus       212 f~~  214 (463)
T 3cxl_A          212 FKV  214 (463)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            653


No 276
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=85.44  E-value=0.35  Score=39.09  Aligned_cols=89  Identities=9%  Similarity=0.066  Sum_probs=43.2

Q ss_pred             CCCCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeE
Q psy3166           7 YPPERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGC   86 (228)
Q Consensus         7 ~~~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~   86 (228)
                      ++.+..+ ...|+.|....+|+....++... .....+..+.+|+.....  ........|..+++.+..+..+.+++..
T Consensus        31 ~~~~~~~-~~~l~~G~~N~~y~v~~~~~~~~-~~~~~~~~~vlRi~~~~~--~~~~~~~~E~~~l~~L~~~g~~P~~~~~  106 (369)
T 3c5i_A           31 FTEDNLR-VKQILSGLTNQLFEVGLKEETAN-NYNSIRTRVLFRIYGKHV--DELYNTISEFEVYKTMSKYKIAPQLLNT  106 (369)
T ss_dssp             CCGGGEE-EEEC----CCEEEEEEECHHHHT-TCTTSCCEEEEEECCTTG--GGTSCHHHHHHHHHHHHHTTSSCCEEEE
T ss_pred             CCcCceE-EEEeCCcccceEEEEEeCCCCcc-cccCCCceEEEEecCCCc--cceecHHHHHHHHHHHHhcCCCCceEEe
Confidence            4444443 35677788889998764321000 000012357888764321  1111234678888777444334455543


Q ss_pred             EEcCceEEEEecCCCC
Q psy3166          87 CYKDELRLVVEYCALG  102 (228)
Q Consensus        87 ~~~~~~~lv~e~~~~~  102 (228)
                      +   .-++++++++|.
T Consensus       107 ~---~~~~v~e~i~G~  119 (369)
T 3c5i_A          107 F---NGGRIEEWLYGD  119 (369)
T ss_dssp             E---TTEEEEECCCSE
T ss_pred             c---CCcEEEEEecCC
Confidence            3   236788888764


No 277
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=83.85  E-value=0.45  Score=37.59  Aligned_cols=28  Identities=21%  Similarity=0.127  Sum_probs=23.8

Q ss_pred             CCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166         116 NKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus       116 ~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      ..++|+|+++.||+++ + .+.++||+.+.
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            3478999999999998 4 78999998764


No 278
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=83.81  E-value=0.5  Score=39.75  Aligned_cols=73  Identities=7%  Similarity=-0.007  Sum_probs=41.9

Q ss_pred             eeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEcCceEE
Q psy3166          15 GEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRL   94 (228)
Q Consensus        15 ~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~l   94 (228)
                      .+.|+.|-...+|++...+         .+..+.+|+.......  .....+|..++..|..+.-..++++.+. +  .+
T Consensus       113 i~~lsgG~tN~~y~v~~~~---------~~~~~vLRi~g~~~~~--~idR~~E~~vl~~L~~~gl~P~ll~~~~-~--G~  178 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMS---------KQAKYLIRLYGPKTDE--IINREREKKISCILYNKNIAKKIYVFFT-N--GR  178 (458)
T ss_dssp             EEEECC--CEEEEEEEETT---------TTEEEEEEEECC-CCS--CSCHHHHHHHHHHHTTSSSBCCEEEEET-T--EE
T ss_pred             EEEcCCCeEeEEEEEEECC---------CCceEEEEECCCChhh--hcCHHHHHHHHHHHHhcCCCCCEEEEeC-C--eE
Confidence            4567778888999986432         1235788876432111  0112478889988855554566666552 2  24


Q ss_pred             EEecCCC
Q psy3166          95 VVEYCAL  101 (228)
Q Consensus        95 v~e~~~~  101 (228)
                      |+||++|
T Consensus       179 v~e~I~G  185 (458)
T 2qg7_A          179 IEEFMDG  185 (458)
T ss_dssp             EEECCCS
T ss_pred             EEEeeCC
Confidence            7888765


No 279
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=83.58  E-value=0.38  Score=40.01  Aligned_cols=79  Identities=9%  Similarity=0.009  Sum_probs=45.0

Q ss_pred             eeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEEcCceEE
Q psy3166          15 GEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCYKDELRL   94 (228)
Q Consensus        15 ~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~l   94 (228)
                      .+.|+.|-...+|++...+....  ....+..+.+|+......   ...+..|..+++.+..+....++++.+..   .+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~--~~~~~~~~vlRi~~~~~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~---g~  149 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPP--IRNEPNKVLLRVYFNPET---ESHLVAESVIFTLLSERHLGPKLYGIFSG---GR  149 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCC--SSSCCSEEEEEEECSCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT---EE
T ss_pred             EEEeCCCcccceEEEEeCCCccc--cCCCCceEEEEEeCCCCc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC---CE
Confidence            35677788889999875432110  011234588888743211   12344688888887545444555554322   26


Q ss_pred             EEecCCC
Q psy3166          95 VVEYCAL  101 (228)
Q Consensus        95 v~e~~~~  101 (228)
                      |++|++|
T Consensus       150 v~e~l~G  156 (429)
T 1nw1_A          150 LEEYIPS  156 (429)
T ss_dssp             EECCCCE
T ss_pred             EEEEeCC
Confidence            7777764


No 280
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=82.63  E-value=0.57  Score=38.69  Aligned_cols=29  Identities=31%  Similarity=0.382  Sum_probs=25.5

Q ss_pred             CCcccCCCCCCEeecCC------CcEEEeeccCcc
Q psy3166         117 KVVHRDLATRNILLSSP------HVVKISDFGLSE  145 (228)
Q Consensus       117 ~i~H~~lk~~nil~~~~------~~~kl~dfg~~~  145 (228)
                      .++|+|+.+.||+++.+      +.+.++||..+.
T Consensus       245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence            36899999999999876      789999999864


No 281
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=81.59  E-value=0.66  Score=38.13  Aligned_cols=28  Identities=32%  Similarity=0.427  Sum_probs=23.9

Q ss_pred             CcccCCCCCCEeec------CCCcEEEeeccCcc
Q psy3166         118 VVHRDLATRNILLS------SPHVVKISDFGLSE  145 (228)
Q Consensus       118 i~H~~lk~~nil~~------~~~~~kl~dfg~~~  145 (228)
                      ++|+|+.+.|||+.      ..+.+.++||.++.
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            57999999999993      45679999999875


No 282
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=80.92  E-value=0.52  Score=37.75  Aligned_cols=29  Identities=21%  Similarity=0.373  Sum_probs=25.6

Q ss_pred             CCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166         117 KVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus       117 ~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      .++|+|+.+.|++++.++.+.++||+.+.
T Consensus       207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             EEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             eeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            47899999999999877889999998764


No 283
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=74.49  E-value=1.3  Score=36.81  Aligned_cols=28  Identities=25%  Similarity=0.504  Sum_probs=24.8

Q ss_pred             CCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166         117 KVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus       117 ~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      .++|+|+.+.|++ +..+.+.++||..+.
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCC
Confidence            3689999999999 777889999999875


No 284
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=62.66  E-value=22  Score=26.49  Aligned_cols=32  Identities=9%  Similarity=0.122  Sum_probs=26.7

Q ss_pred             cCCCCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166         114 SNNKVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus       114 h~~~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      |...-+|.-+.|+|++++.++.+++...|+..
T Consensus       101 ~~~~r~tf~l~P~NL~f~~~~~p~i~hRGi~~  132 (219)
T 4ano_A          101 HSARRLIFIVCPENLMFNRALEPFFLHVGVKE  132 (219)
T ss_dssp             CCSSSEECCCCGGGEEECTTCCEEESCCEETT
T ss_pred             hhhCceeEEEeCceEEEeCCCcEEEEEcCCcc
Confidence            44566788899999999999999999888643


No 285
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=51.02  E-value=17  Score=27.07  Aligned_cols=29  Identities=14%  Similarity=0.103  Sum_probs=24.3

Q ss_pred             CCCcccCCCCCCEeecCCCcEEEeeccCc
Q psy3166         116 NKVVHRDLATRNILLSSPHVVKISDFGLS  144 (228)
Q Consensus       116 ~~i~H~~lk~~nil~~~~~~~kl~dfg~~  144 (228)
                      ..-+|--+.|+|++++.++.+++.-.|+.
T Consensus        98 ~~r~tf~L~P~NL~f~~~~~p~i~~RGik  126 (215)
T 4ann_A           98 RTRYTFVLAPDELFFTRDGLPIAKTRGLQ  126 (215)
T ss_dssp             GSSEECCCSGGGEEECTTSCEEESCCEET
T ss_pred             cCceEEEEecceEEEcCCCCEEEEEccCc
Confidence            34567789999999999999999988764


No 286
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=50.69  E-value=45  Score=25.72  Aligned_cols=73  Identities=16%  Similarity=0.086  Sum_probs=36.6

Q ss_pred             eeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcC----CCCceEEee-e--E-E
Q psy3166          16 EVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVG----KHDHIVSFI-G--C-C   87 (228)
Q Consensus        16 ~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~----~h~ni~~~~-~--~-~   87 (228)
                      +.|+.|..+.||+....+           ..+++|.....  .   .....|..++..+.    ..|.++... +  + .
T Consensus        38 ~~l~gG~~n~~~~v~~~~-----------~~~vlk~~~~~--~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~  101 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDS-----------GAVCLKRIHRP--E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSK  101 (346)
T ss_dssp             EECC----CEEEEEEETT-----------EEEEEEEECSC--H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEE
T ss_pred             eeccccccCcEEEEEeCC-----------CCEEEEecCCC--H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEE
Confidence            355566788999876322           13889987642  2   22233445554442    123333311 1  0 1


Q ss_pred             EcCceEEEEecCCCCcH
Q psy3166          88 YKDELRLVVEYCALGDL  104 (228)
Q Consensus        88 ~~~~~~lv~e~~~~~~L  104 (228)
                      ..+..+++|++++|.++
T Consensus       102 ~~~~~~~l~~~i~G~~~  118 (346)
T 2q83_A          102 HGSFLFVVYDWIEGRPF  118 (346)
T ss_dssp             ETTEEEEEEECCCCBCC
T ss_pred             ECCEEEEEEEeecCccC
Confidence            23457899999987543


No 287
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=48.84  E-value=32  Score=26.51  Aligned_cols=77  Identities=4%  Similarity=-0.078  Sum_probs=40.9

Q ss_pred             eeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCC-ceEEeeeE-----
Q psy3166          13 ILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHD-HIVSFIGC-----   86 (228)
Q Consensus        13 ~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~-ni~~~~~~-----   86 (228)
                      .-.+.|+.|....+|+....++           .+++|.......   ...+..|..++..+..+. .+.+++..     
T Consensus        25 ~~~~~i~~G~~n~~~~v~~~~g-----------~~vlk~~~~~~~---~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~   90 (322)
T 2ppq_A           25 TSYKGIAEGVENSNFLLHTTKD-----------PLILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGEL   90 (322)
T ss_dssp             EEEEEECC---EEEEEEEESSC-----------CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCS
T ss_pred             eEeeccCCCcccceEEEEeCCc-----------cEEEEEeCCCCC---HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCE
Confidence            3456677788888998764322           388888764211   123445777777663331 12333211     


Q ss_pred             --EEcCceEEEEecCCCCc
Q psy3166          87 --CYKDELRLVVEYCALGD  103 (228)
Q Consensus        87 --~~~~~~~lv~e~~~~~~  103 (228)
                        ...+..++++++++|..
T Consensus        91 ~~~~~g~~~~l~~~l~G~~  109 (322)
T 2ppq_A           91 LGELSGRPAALISFLEGMW  109 (322)
T ss_dssp             CEEETTEEEEEEECCCCBC
T ss_pred             EEEECCEEEEEEEeCCCcC
Confidence              12244678999998754


No 288
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=43.26  E-value=30  Score=28.45  Aligned_cols=29  Identities=31%  Similarity=0.469  Sum_probs=23.8

Q ss_pred             CCcccCCCCCCEeecCC----------------------------CcEEEeeccCcc
Q psy3166         117 KVVHRDLATRNILLSSP----------------------------HVVKISDFGLSE  145 (228)
Q Consensus       117 ~i~H~~lk~~nil~~~~----------------------------~~~kl~dfg~~~  145 (228)
                      .++|+|+.+.|||++.+                            +.+.++||+.+.
T Consensus       250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~  306 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYAS  306 (429)
T ss_dssp             EEECSCCCGGGEEEEC------------------------------CCEECCCTTCE
T ss_pred             EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCC
Confidence            47899999999999875                            678999998764


No 289
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=36.83  E-value=70  Score=23.95  Aligned_cols=62  Identities=10%  Similarity=0.066  Sum_probs=35.8

Q ss_pred             CCCCCEeecCCCcEEEeeccCcccccccccccCCCCCCCCcceeecccccccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q psy3166         123 LATRNILLSSPHVVKISDFGLSEDIYEQNVFQNGEPSEKLPIRWLALESLVSNIYTNKSDVWSFGVVLWEIVTLGANPY  201 (228)
Q Consensus       123 lk~~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Diwslg~~~~~l~t~g~~pf  201 (228)
                      +.|..|++..+|.|...+ ..+.               .....+.+||... ...+.+.=|+|||+++|.-+-+|-.+=
T Consensus        76 ~~~~~i~l~~dG~V~f~~-~~s~---------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~  137 (229)
T 2yle_A           76 RSAAQIRVWRDGAVTLAP-AADD---------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN  137 (229)
T ss_dssp             CSGGGEEEETTSCEEECC-C---------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             cCCcceEEecCCceeccc-cccc---------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence            446778888888877663 1110               0011356777653 234567789999999999988665543


No 290
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=32.23  E-value=38  Score=28.23  Aligned_cols=15  Identities=33%  Similarity=0.485  Sum_probs=13.6

Q ss_pred             CCcccCCCCCCEeec
Q psy3166         117 KVVHRDLATRNILLS  131 (228)
Q Consensus       117 ~i~H~~lk~~nil~~  131 (228)
                      .++|+|+.+.|||++
T Consensus       291 v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          291 VLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEECSCCCGGGEEEC
T ss_pred             eEEecCCCCCcEEee
Confidence            368999999999998


No 291
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=26.78  E-value=40  Score=26.74  Aligned_cols=28  Identities=29%  Similarity=0.469  Sum_probs=23.2

Q ss_pred             CCcccCCCCCCEeecCCCcEEEeeccCcc
Q psy3166         117 KVVHRDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus       117 ~i~H~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      .++|+|+.+.||+++.++ +.++||..+.
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            478999999999997654 8999998764


No 292
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=26.38  E-value=41  Score=29.80  Aligned_cols=25  Identities=28%  Similarity=0.280  Sum_probs=22.4

Q ss_pred             cCCCCCCEeecCCCcEEEeeccCcc
Q psy3166         121 RDLATRNILLSSPHVVKISDFGLSE  145 (228)
Q Consensus       121 ~~lk~~nil~~~~~~~kl~dfg~~~  145 (228)
                      +|-.++|||++..|.+.=+|||..-
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             CCCCCcceEEeCCCCEEEEeehhhh
Confidence            5778999999999999999999763


No 293
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=25.78  E-value=3.5  Score=34.69  Aligned_cols=28  Identities=7%  Similarity=-0.064  Sum_probs=23.5

Q ss_pred             HHHHHHHHHHHHhcCCCCceEEeeeEEEc
Q psy3166          61 YDKFLKEINLMKDVGKHDHIVSFIGCCYK   89 (228)
Q Consensus        61 ~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   89 (228)
                      ...|..|++.+.++ +|+|++++.++|..
T Consensus       323 ~~eF~~Eve~L~~i-~HrNLV~L~gyC~s  350 (487)
T 3oja_A          323 SETERLECERENQA-RQREIDALKEQYRT  350 (487)
T ss_dssp             --CHHHHHHHHHHH-HHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHhcc-cccchhhHHHHhcC
Confidence            45688999999999 99999999998754


No 294
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=20.56  E-value=69  Score=26.36  Aligned_cols=88  Identities=6%  Similarity=0.009  Sum_probs=47.9

Q ss_pred             CCceeeeeeeeeecCceEEEeeecCCCCCCCCcccceeeeeeccccCCCHHHHHHHHHHHHHHHhcCCCCceEEeeeEEE
Q psy3166           9 PERLILGEVLGQGEFGVVVKGLLGDGPTEGASGQAAMEVAVKMLKANADAKTYDKFLKEINLMKDVGKHDHIVSFIGCCY   88 (228)
Q Consensus         9 ~~~~~~~~~ig~g~~~~V~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   88 (228)
                      .+..++ +.+..|-...+|+....+....  ....+..+.+|+.....  .......+|..+++.+..+.-..++++.+ 
T Consensus        70 ~~~~~v-~~lsGG~TN~~y~v~~~~~~~~--~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~-  143 (424)
T 3mes_A           70 ESYIEV-KQIFSGLTNQLFVVSIVNESMS--LSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADF-  143 (424)
T ss_dssp             GGGEEE-EEECCCSSSEEEEEEECCC-------CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEE-
T ss_pred             CCceEE-EEcCCCcccceEEEEeCCCccc--ccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEc-
Confidence            344444 4556677788999876432110  00113458888864331  11112346888888774444455555432 


Q ss_pred             cCceEEEEecCCCCcH
Q psy3166          89 KDELRLVVEYCALGDL  104 (228)
Q Consensus        89 ~~~~~lv~e~~~~~~L  104 (228)
                        .-++|++|++|.+|
T Consensus       144 --~~~~I~efI~G~~l  157 (424)
T 3mes_A          144 --PEGRIEEFIDGEPL  157 (424)
T ss_dssp             --TTEEEEECCCSEEC
T ss_pred             --CCCEEEEEeCCccC
Confidence              23688999987553


Done!