BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy317
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H172|ABCG4_HUMAN ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4
PE=2 SV=2
Length = 646
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 12 DSMDPKKTPLTRMQISNGMMVLAAMFNQSQAGSCFISEILDTLGLQEHKTTMTSNLSGGQ 71
D + P T L M +S + + + + ++EIL LGL T T+ LSGGQ
Sbjct: 150 DMLLPHLTVLEAMMVSANL----KLSEKQEVKKELVTEILTALGLMSCSHTRTALLSGGQ 205
Query: 72 KKRLSIALELVNNPPIMFFDEPTSPLHKA 100
+KRL+IALELVNNPP+MFFDEPTS L A
Sbjct: 206 RKRLAIALELVNNPPVMFFDEPTSGLDSA 234
>sp|P45844|ABCG1_HUMAN ATP-binding cassette sub-family G member 1 OS=Homo sapiens GN=ABCG1
PE=2 SV=3
Length = 678
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 21 LTRMQISNGMMVLAAMFNQS--QAGSCFISEILDTLGLQEHKTTMTSNLSGGQKKRLSIA 78
L + + MMV A + Q + + EIL LGL T T +LSGGQ+KRL+IA
Sbjct: 169 LPHLTVQEAMMVSAHLKLQEKDEGRREMVKEILTALGLLSCANTRTGSLSGGQRKRLAIA 228
Query: 79 LELVNNPPIMFFDEPTSPLHKA 100
LELVNNPP+MFFDEPTS L A
Sbjct: 229 LELVNNPPVMFFDEPTSGLDSA 250
>sp|Q64343|ABCG1_MOUSE ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1
PE=2 SV=1
Length = 666
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 21 LTRMQISNGMMVLAAMFNQS--QAGSCFISEILDTLGLQEHKTTMTSNLSGGQKKRLSIA 78
L + + MMV A + Q + + EIL LGL T T +LSGGQ+KRL+IA
Sbjct: 169 LPHLTVQEAMMVSAHLKLQEKDEGRREMVKEILTALGLLPCANTRTGSLSGGQRKRLAIA 228
Query: 79 LELVNNPPIMFFDEPTSPLHKA 100
LELVNNPP+MFFDEPTS L A
Sbjct: 229 LELVNNPPVMFFDEPTSGLDSA 250
>sp|Q8RI39|POTA_FUSNN Spermidine/putrescine import ATP-binding protein PotA
OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC
25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=potA PE=3
SV=1
Length = 376
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
+++ L +GL+EH T S LSGGQ++R+SIA L+N P ++ DEP S L
Sbjct: 116 VNKYLKLVGLEEHSTKKVSQLSGGQQQRISIARALINKPGVLLLDEPLSAL 166
>sp|Q9MAG3|AB24G_ARATH ABC transporter G family member 24 OS=Arabidopsis thaliana
GN=ABCG24 PE=1 SV=2
Length = 1109
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
Query: 47 ISEILDTLGLQEHKTTMTS-----NLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
+ I+D+LGLQ ++++ +SGGQ+KR+++ LE+V P ++F DEPTS L A
Sbjct: 623 VERIIDSLGLQAVRSSLVGTVEKRGISGGQRKRVNVGLEMVMEPSVLFLDEPTSGLDSA 681
>sp|Q7PC81|AB43G_ARATH ABC transporter G family member 43 OS=Arabidopsis thaliana
GN=ABCG43 PE=3 SV=1
Length = 1390
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 19/102 (18%)
Query: 40 SQAGSCFISEILDTLGLQEHKTTMT-----SNLSGGQKKRLSIALELVNNPPIMFFDEPT 94
S+ S ++E+L+T+ L+E K ++ S ++ Q+KRL+IA+ELV+NP I+F DEPT
Sbjct: 910 SETKSAIVNEVLETIELEEIKDSLVGVPGISGVTAEQRKRLTIAVELVSNPSIIFMDEPT 969
Query: 95 SPLHKAEFTPKYERKVDTKVDYTGNR-TQNLQQTIRNEVCLI 135
+ L D + R +N+ +T R VC I
Sbjct: 970 TGL-------------DARAAAIVMRAVKNIAETGRTVVCTI 998
>sp|A0LM36|MACB_SYNFM Macrolide export ATP-binding/permease protein MacB
OS=Syntrophobacter fumaroxidans (strain DSM 10017 /
MPOB) GN=macB PE=3 SV=1
Length = 715
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 21 LTRMQ-ISNGMMVL--AAMFNQSQAGSCFISEILDTLGLQEHKTTMTSNLSGGQKKRLSI 77
L RM + N MM L A Q G +L +GL EH S LSGGQ++R++I
Sbjct: 97 LPRMSAVENVMMPLSYAGGGVSDQNGRERAGALLTRMGLGEHLDNEPSQLSGGQQQRVAI 156
Query: 78 ALELVNNPPIMFFDEPTSPLHKA 100
A L+NNP ++F DEPT L A
Sbjct: 157 ARALINNPSLLFADEPTGNLDSA 179
>sp|O65934|ABC1_MYCTU ABC transporter ATP-binding/permease protein Rv1747
OS=Mycobacterium tuberculosis GN=Rv1747 PE=1 SV=1
Length = 865
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKAEFTPKY 106
++ +L+ L + +H T LSGGQ+KR S+ALEL+ P ++ DEPTS L P
Sbjct: 434 VARVLEELEMSKHIDTRVDKLSGGQRKRASVALELLTGPSLLILDEPTSGL-----DPAL 488
Query: 107 ERKVDT 112
+R+V T
Sbjct: 489 DRQVMT 494
>sp|Q04F14|METN1_OENOB Methionine import ATP-binding protein MetN 1 OS=Oenococcus oeni
(strain ATCC BAA-331 / PSU-1) GN=metN1 PE=3 SV=1
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 49 EILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
E+L +GLQE+ + S LSGGQK+R++IA L NNP I+ DE TS L
Sbjct: 133 ELLKLVGLQEYVSAYPSQLSGGQKQRVAIARALANNPEILISDESTSAL 181
>sp|Q8G5P8|METN_BIFLO Methionine import ATP-binding protein MetN OS=Bifidobacterium
longum (strain NCC 2705) GN=metN PE=3 SV=1
Length = 401
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
++E+L+ +GL EH S LSGGQK+R+ IA L NP I+ DE TS L
Sbjct: 128 VNELLEFVGLSEHANKYPSQLSGGQKQRVGIARALATNPEILLADEATSAL 178
>sp|Q8GU89|PDR4_ORYSJ Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica
GN=PDR4 PE=2 SV=1
Length = 1450
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 40 SQAGSCFISEILDTLGLQEHKTTMT-----SNLSGGQKKRLSIALELVNNPPIMFFDEPT 94
S+A FI E++D + L + + S LS Q+KRL+IA+ELV NP I+F DEPT
Sbjct: 972 SEARKMFIEEVMDLVELTSLRGALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1031
Query: 95 SPL 97
S L
Sbjct: 1032 SGL 1034
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 41 QAGSCFISEILDTLGLQEHKTTMTSN-----LSGGQKKRLSIALELVNNPPIMFFDEPTS 95
Q S IL LGL T+ N +SGGQ+KR++ LV +F DE ++
Sbjct: 299 QESSVVTDYILKILGLDICADTVVGNEMLRGISGGQRKRVTTGEMLVGPARALFMDEIST 358
Query: 96 PL 97
L
Sbjct: 359 GL 360
>sp|Q9ZUT8|AB33G_ARATH ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33
PE=2 SV=1
Length = 1413
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 39/138 (28%)
Query: 4 DSLESSIWDSMDPKKTPLTRMQISNGMMVLAAMFNQSQAGSCFISEILDTLGLQEHKTTM 63
+SL S W + P+ P T+++ F+ ++L+T+ L+E K +
Sbjct: 917 ESLIYSAWLRLVPEINPQTKIR--------------------FVKQVLETIELEEIKDAL 956
Query: 64 T-----SNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKAEFTPKYERKVDTKVDYTG 118
S LS Q+KRL++A+ELV NP I+F DEPT+ L D +
Sbjct: 957 VGVAGVSGLSTEQRKRLTVAVELVANPSIIFMDEPTTGL-------------DARAAAIV 1003
Query: 119 NR-TQNLQQTIRNEVCLI 135
R +N+ +T R VC I
Sbjct: 1004 MRAVKNVAETGRTIVCTI 1021
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 50 ILDTLGLQEHKTTMTSN-----LSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
IL LGL T+ N +SGGQKKRL+ A +V +F DE T+ L
Sbjct: 289 ILKILGLDICAETLVGNAMKRGISGGQKKRLTTAEMIVGPTKALFMDEITNGL 341
>sp|Q8RFN2|METN_FUSNN Methionine import ATP-binding protein MetN OS=Fusobacterium
nucleatum subsp. nucleatum (strain ATCC 25586 / CIP
101130 / JCM 8532 / LMG 13131) GN=metN PE=3 SV=1
Length = 335
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
+SE+L+ +GL + S LSGGQK+R+SIA L NNP I+ DE TS L
Sbjct: 118 VSELLEIVGLSDKAKYYPSQLSGGQKQRVSIARALANNPDILLSDEATSAL 168
>sp|Q7VI92|METN_HELHP Methionine import ATP-binding protein MetN OS=Helicobacter
hepaticus (strain ATCC 51449 / 3B1) GN=metN PE=3 SV=1
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA------ 100
+ E+L+ +GL E + S LSGGQK+R++IA L N+P ++ DE TS L
Sbjct: 118 VDELLELVGLSERASFFPSQLSGGQKQRVAIARALANHPKVLLCDEATSALDTKTTKSIL 177
Query: 101 EFTPKYERKVDTKVDYTGNRTQNLQQTIRNEVCLISD 137
+R++ V ++ + +++ I N++C++SD
Sbjct: 178 ALLRDIQRRLGLSVVLITHQIEVVRE-ICNKMCVVSD 213
>sp|Q7PC83|AB41G_ARATH ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41
PE=2 SV=1
Length = 1397
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 19/95 (20%)
Query: 47 ISEILDTLGLQEHKTTMT-----SNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKAE 101
+ E+L+T+ L++ K +M S LS Q+KRL+IA+ELV+NP I+F DEPT+ L
Sbjct: 924 VKEVLETVELEDIKDSMVGLPGISGLSTEQRKRLTIAVELVSNPSIIFLDEPTTGL---- 979
Query: 102 FTPKYERKVDTKVDYTGNR-TQNLQQTIRNEVCLI 135
D + R +N+ +T R VC I
Sbjct: 980 ---------DARAAAIVMRAVKNVAETGRTVVCTI 1005
>sp|P44785|METN_HAEIN Methionine import ATP-binding protein MetN OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=metN PE=3 SV=1
Length = 345
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
I+ +LD +GL E + SNLSGGQK+R++IA L ++P ++ DE TS L A
Sbjct: 121 ITALLDLVGLSEKRDAYPSNLSGGQKQRVAIARALASDPKVLLCDEATSALDPA 174
>sp|Q4QMH4|METN_HAEI8 Methionine import ATP-binding protein MetN OS=Haemophilus
influenzae (strain 86-028NP) GN=metN PE=3 SV=1
Length = 345
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
I+ +LD +GL E + SNLSGGQK+R++IA L ++P ++ DE TS L A
Sbjct: 121 ITALLDLVGLSEKRDAYPSNLSGGQKQRVAIARALASDPKVLLCDEATSALDPA 174
>sp|Q9X196|POTA_THEMA Spermidine/putrescine import ATP-binding protein PotA OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=potA PE=3 SV=1
Length = 368
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
++E+L + ++EH M S LSGGQK+R++IA L N P ++ DEP S L
Sbjct: 116 VNELLSLIRMEEHAQKMPSQLSGGQKQRVAIARALANEPRVLLLDEPLSAL 166
>sp|Q1BWI2|NODI_BURCA Nod factor export ATP-binding protein I OS=Burkholderia cenocepacia
(strain AU 1054) GN=nodI PE=3 SV=1
Length = 304
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 11 WDSMDPKKTPLTRMQISNGMMVLAAMFNQS-QAGSCFISEILDTLGLQEHKTTMTSNLSG 69
+D++DP T + ++V + F S QA ++ +L+ L+ LSG
Sbjct: 86 FDNLDPDFT------VRENLLVFSRYFGMSAQAARALVAPLLEFAKLENKADAKVGELSG 139
Query: 70 GQKKRLSIALELVNNPPIMFFDEPTSPL 97
G K+RL++A LVN+P ++ DEPT+ L
Sbjct: 140 GMKRRLTLARALVNDPDVLVLDEPTTGL 167
>sp|Q7VM95|METN_HAEDU Methionine import ATP-binding protein MetN OS=Haemophilus ducreyi
(strain 35000HP / ATCC 700724) GN=metN PE=3 SV=1
Length = 344
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
++E+L+ +GL E K SNLSGGQK+R++IA L ++P ++ DE TS L
Sbjct: 121 VNELLELVGLTERKDVYPSNLSGGQKQRVAIARALASDPKVLLCDEATSAL 171
>sp|Q832Y6|METN1_ENTFA Methionine import ATP-binding protein MetN 1 OS=Enterococcus
faecalis (strain ATCC 700802 / V583) GN=metN1 PE=3 SV=1
Length = 356
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
IS +L+ +GL E + S LSGGQK+R++IA L N+P I+ DE TS L
Sbjct: 121 ISHLLELVGLSEKRDAYPSQLSGGQKQRVAIARALANDPEILLCDEATSAL 171
>sp|Q7PC82|AB42G_ARATH ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42
PE=2 SV=1
Length = 1392
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 17/101 (16%)
Query: 40 SQAGSCFISEILDTLGLQEHKTTMT-----SNLSGGQKKRLSIALELVNNPPIMFFDEPT 94
S+ ++E+L+T+ L+E K ++ S L+ Q+KRL+IA+ELV+NP I+F DEPT
Sbjct: 912 SETKCAIVNEVLETIELEEIKDSIVGIPGISGLTTEQRKRLTIAVELVSNPSIIFMDEPT 971
Query: 95 SPLHKAEFTPKYERKVDTKVDYTGNRTQNLQQTIRNEVCLI 135
+ L A R V +N+ +T R VC I
Sbjct: 972 TGL-DARAAAIVMRAV-----------KNIAETGRTVVCTI 1000
>sp|Q6D5H7|METN1_ERWCT Methionine import ATP-binding protein MetN 1 OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=metN1 PE=3 SV=1
Length = 340
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
+ EIL +GLQ+ + + + LSGGQK+R+ IA + N+P ++ DEPTS L
Sbjct: 122 VPEILALVGLQDKEASYPAQLSGGQKQRVGIARAIANHPEVLLCDEPTSAL 172
>sp|Q9LFH0|AB37G_ARATH ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37
PE=2 SV=1
Length = 1450
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 5/57 (8%)
Query: 46 FISEILDTLGLQEHK-----TTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
F+ ++L+T+ L E K T S LS Q+KRL+IA+ELV NP I+F DEPT+ L
Sbjct: 976 FVKQVLETIELDEIKDSLVGVTGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1032
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 62 TMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
M +SGGQKKRL+ A +V +F DE T+ L
Sbjct: 341 VMRRGISGGQKKRLTTAEMIVGPTKALFMDEITNGL 376
>sp|Q8Z990|METN1_SALTI Methionine import ATP-binding protein MetN 1 OS=Salmonella typhi
GN=metN1 PE=3 SV=1
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+LD +GL + + +NLSGGQK+R++IA L +NP ++ DE TS L A
Sbjct: 121 VTELLDLVGLGDKHDSYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPA 174
>sp|Q57T09|METN1_SALCH Methionine import ATP-binding protein MetN 1 OS=Salmonella
choleraesuis (strain SC-B67) GN=metN1 PE=3 SV=2
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+LD +GL + + +NLSGGQK+R++IA L +NP ++ DE TS L A
Sbjct: 121 VTELLDLVGLGDKHDSYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPA 174
>sp|Q5PID0|METN1_SALPA Methionine import ATP-binding protein MetN 1 OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=metN1 PE=3
SV=1
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+LD +GL + + +NLSGGQK+R++IA L +NP ++ DE TS L A
Sbjct: 121 VTELLDLVGLGDKHDSYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPA 174
>sp|Q8ZRM9|METN1_SALTY Methionine import ATP-binding protein MetN 1 OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=metN1 PE=3 SV=1
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+LD +GL + + +NLSGGQK+R++IA L +NP ++ DE TS L A
Sbjct: 121 VTELLDLVGLGDKHDSYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPA 174
>sp|Q667L9|METN2_YERPS Methionine import ATP-binding protein MetN 2 OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=metN2
PE=3 SV=1
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+LD +GL + + +NLSGGQK+R++IA L +NP ++ DE TS L A
Sbjct: 121 VNELLDLVGLTDKQDAYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPA 174
>sp|Q1CFH7|METN2_YERPN Methionine import ATP-binding protein MetN 2 OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=metN2 PE=3 SV=1
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+LD +GL + + +NLSGGQK+R++IA L +NP ++ DE TS L A
Sbjct: 121 VNELLDLVGLTDKQDAYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPA 174
>sp|Q8ZH38|METN1_YERPE Methionine import ATP-binding protein MetN 1 OS=Yersinia pestis
GN=metN1 PE=3 SV=1
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+LD +GL + + +NLSGGQK+R++IA L +NP ++ DE TS L A
Sbjct: 121 VNELLDLVGLTDKQDAYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPA 174
>sp|Q1CAK4|METN1_YERPA Methionine import ATP-binding protein MetN 1 OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=metN1 PE=3 SV=1
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+LD +GL + + +NLSGGQK+R++IA L +NP ++ DE TS L A
Sbjct: 121 VNELLDLVGLTDKQDAYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPA 174
>sp|P55662|Y4TH_RHISN Probable amino-acid ABC transporter ATP-binding protein y4tH
OS=Rhizobium sp. (strain NGR234) GN=NGR_a01510 PE=3 SV=1
Length = 257
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 49 EILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
E+L+ +GL +H + LSGGQ++R+ IA L P IM FDEPTS L
Sbjct: 133 ELLELVGLVDHAHKFPAQLSGGQQQRVGIARALAMRPKIMLFDEPTSAL 181
>sp|P54537|ARTM_BACSU Arginine transport ATP-binding protein ArtM OS=Bacillus subtilis
(strain 168) GN=artM PE=1 SV=1
Length = 240
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 41 QAGSCFISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
QA ++L +GL E + + LSGGQK+R++IA L NP IM FDEPTS L
Sbjct: 111 QAAQEKAEDLLRKVGLFEKRNDYPNRLSGGQKQRVAIARALAMNPDIMLFDEPTSAL 167
>sp|Q8PGE8|METN_XANAC Methionine import ATP-binding protein MetN OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=metN PE=3 SV=1
Length = 335
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
++E+L +GLQEH + LSGGQK+R+ IA L P I+ DE TS L
Sbjct: 121 VAELLARVGLQEHANKYPAQLSGGQKQRVGIARALATRPQILLCDEATSAL 171
>sp|Q3BNZ3|METN_XANC5 Methionine import ATP-binding protein MetN OS=Xanthomonas
campestris pv. vesicatoria (strain 85-10) GN=metN PE=3
SV=1
Length = 335
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
++E+L +GLQEH + LSGGQK+R+ IA L P I+ DE TS L
Sbjct: 121 VAELLARVGLQEHANKYPAQLSGGQKQRVGIARALATRPQILLCDEATSAL 171
>sp|Q39GT7|NODI_BURS3 Nod factor export ATP-binding protein I OS=Burkholderia sp. (strain
383) GN=nodI PE=3 SV=2
Length = 304
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 11 WDSMDPKKTPLTRMQISNGMMVLAAMFNQS-QAGSCFISEILDTLGLQEHKTTMTSNLSG 69
+D++DP T + ++V F S QA + +L+ L+ LSG
Sbjct: 86 FDNLDPDFT------VRENLLVFGRYFGMSAQAAHALVKPLLEFAKLENKADAKVGELSG 139
Query: 70 GQKKRLSIALELVNNPPIMFFDEPTSPL 97
G K+RL++A LVN+P ++ DEPT+ L
Sbjct: 140 GMKRRLTLARALVNDPDVLVLDEPTTGL 167
>sp|Q6MPX9|MACB_BDEBA Macrolide export ATP-binding/permease protein MacB OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=macB PE=3 SV=1
Length = 650
Score = 52.0 bits (123), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 50 ILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
+LD +GL E ++ LSGGQ++R++IA L+NNP I+F DEPT L
Sbjct: 123 LLDKVGLAERIHHKSNELSGGQQQRIAIARSLINNPRIIFADEPTGNL 170
>sp|Q1IGZ0|METN2_PSEE4 Methionine import ATP-binding protein MetN 2 OS=Pseudomonas
entomophila (strain L48) GN=metN2 PE=3 SV=1
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
++E+L +GLQ+H + LSGGQK+R+ IA L NP I+ DE TS L
Sbjct: 122 VTELLARVGLQDHARKYPAQLSGGQKQRVGIARALSTNPKILLCDEATSAL 172
>sp|Q08234|YO075_YEAST Uncharacterized ABC transporter ATP-binding protein/permease
YOL075C OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=YOL075C PE=1 SV=3
Length = 1294
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 39/56 (69%), Gaps = 5/56 (8%)
Query: 47 ISEILDTLGLQEHKTTMTSN-----LSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
+ ++++ LGL++ T+ + LSGG+K+RLSI ++++NP IMF DEPT+ L
Sbjct: 161 VEQLIEELGLKDCADTLVGDNSHRGLSGGEKRRLSIGTQMISNPSIMFLDEPTTGL 216
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 37/53 (69%), Gaps = 5/53 (9%)
Query: 50 ILDTLGLQEHKTTMTSN-----LSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
++ +LGL+ + + N +SGG+K+R+++ ++L+N+PPI+ DEPTS L
Sbjct: 817 LIRSLGLKHCENNIIGNEFVKGISGGEKRRVTMGVQLLNDPPILLLDEPTSGL 869
>sp|Q3KJS6|METN2_PSEPF Methionine import ATP-binding protein MetN 2 OS=Pseudomonas
fluorescens (strain Pf0-1) GN=metN2 PE=3 SV=1
Length = 374
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
+ E+L+ +GLQ T + LSGGQK+R+ IA LV++P I+ DE TS L
Sbjct: 151 VRELLELVGLQAKHTAYPAQLSGGQKQRVGIARALVHDPDILLCDEATSAL 201
>sp|Q8NY21|METN1_STAAW Methionine import ATP-binding protein MetN 1 OS=Staphylococcus
aureus (strain MW2) GN=metN1 PE=3 SV=1
Length = 341
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+L+ +GL + K LSGGQK+R++IA LV NP I+ DE TS L A
Sbjct: 121 VTEMLEFVGLSDKKDQFPEELSGGQKQRVAIARALVTNPKILLCDEATSALDPA 174
>sp|Q6GC27|METN1_STAAS Methionine import ATP-binding protein MetN 1 OS=Staphylococcus
aureus (strain MSSA476) GN=metN1 PE=3 SV=1
Length = 341
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+L+ +GL + K LSGGQK+R++IA LV NP I+ DE TS L A
Sbjct: 121 VTEMLEFVGLSDKKDQFPEELSGGQKQRVAIARALVTNPKILLCDEATSALDPA 174
>sp|Q1GKZ0|PHNC2_RUEST Phosphonates import ATP-binding protein PhnC 2 OS=Ruegeria sp.
(strain TM1040) GN=phnC2 PE=3 SV=1
Length = 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 49 EILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
EILD LG+ EH LSGGQ++R++IA L+ +P I+ DEP + L
Sbjct: 127 EILDRLGIAEHAPKRAEALSGGQQQRVAIARALMQDPKIILADEPIASL 175
>sp|Q5HIL5|METN1_STAAC Methionine import ATP-binding protein MetN 1 OS=Staphylococcus
aureus (strain COL) GN=metN1 PE=3 SV=1
Length = 341
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+L+ +GL + K LSGGQK+R++IA LV NP I+ DE TS L A
Sbjct: 121 VTEMLEFVGLSDKKDQFPDELSGGQKQRVAIARALVTNPKILLCDEATSALDPA 174
>sp|Q2G0V2|METN1_STAA8 Methionine import ATP-binding protein MetN 1 OS=Staphylococcus
aureus (strain NCTC 8325) GN=metN1 PE=3 SV=1
Length = 341
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+L+ +GL + K LSGGQK+R++IA LV NP I+ DE TS L A
Sbjct: 121 VTEMLEFVGLSDKKDQFPDELSGGQKQRVAIARALVTNPKILLCDEATSALDPA 174
>sp|Q2FJI0|METN1_STAA3 Methionine import ATP-binding protein MetN 1 OS=Staphylococcus
aureus (strain USA300) GN=metN1 PE=3 SV=1
Length = 341
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPLHKA 100
++E+L+ +GL + K LSGGQK+R++IA LV NP I+ DE TS L A
Sbjct: 121 VTEMLEFVGLSDKKDQFPDELSGGQKQRVAIARALVTNPKILLCDEATSALDPA 174
>sp|Q4KKK8|METN1_PSEF5 Methionine import ATP-binding protein MetN 1 OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=metN1 PE=3
SV=1
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
++E+LD +GL +H + LSGGQK+R+ IA L P I+ DE TS L
Sbjct: 122 VAELLDRVGLADHAKKYPAQLSGGQKQRVGIARALATKPKILLCDEATSAL 172
>sp|Q24739|BROWN_DROVI Protein brown OS=Drosophila virilis GN=bw PE=2 SV=1
Length = 668
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
+S++L +GL++ T LSGG++KRLS+A EL+ +P +F DEPT+ L
Sbjct: 144 VSDLLLAVGLRDAAHTRIQQLSGGERKRLSLAEELITDPIFLFCDEPTTGL 194
>sp|Q8P4S7|METN_XANCP Methionine import ATP-binding protein MetN OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=metN PE=3 SV=1
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 47 ISEILDTLGLQEHKTTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSPL 97
++E+L +GL++H T + LSGGQK+R+ IA L P I+ DE TS L
Sbjct: 121 VAELLARVGLEQHATKYPAQLSGGQKQRVGIARALATRPQILLCDEATSAL 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,682,983
Number of Sequences: 539616
Number of extensions: 1737844
Number of successful extensions: 8117
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3378
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 4170
Number of HSP's gapped (non-prelim): 4015
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)