RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy3170
(525 letters)
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating
factor-I, PPAF-I, serine proteas hydrolase; HET: NAG;
1.70A {Holotrichia diomphalia}
Length = 278
Score = 226 bits (577), Expect = 2e-70
Identities = 75/305 (24%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLVGTMV 251
I+ G EFP A +G+ ++ CGGSLI+ Y++TAAHC+ ++
Sbjct: 23 ILNGDDTVPEEFPWTAMIGYKNSSN---FEQFACGGSLINNRYIVTAAHCVAGRVL---- 75
Query: 252 KAPLRTLLFISMAEVGFLEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLGKPRYVRF 311
+ L + + E + V+ + +
Sbjct: 76 -RVVGALNKVRLGEWNTATDPDCYGAVRVCVP----------------------DKPIDL 112
Query: 312 GLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIAPPVEFSETLKPACL--N 369
G + + I HP+Y +YHDIAL+++ VEF+ ++P CL
Sbjct: 113 G---------------IEETIQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQP 157
Query: 370 RAHNVKSPTAIASGFGKLNYFDTKESLRLMKVVLDIINNDTCSK----QETTLISSQLCA 425
G+G+ + S K+ + +++ + C+K + SSQLCA
Sbjct: 158 NEEVQVGQRLTVVGWGRTE--TGQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVRSSQLCA 215
Query: 426 TVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIV 485
KD+C GDSGGPL + + + G+ S+G CG P IYT+V Y WI
Sbjct: 216 GG-EKAKDSCGGDSGGPLLAERAN-QQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIE 273
Query: 486 HTVWP 490
+ P
Sbjct: 274 GNIRP 278
Score = 71.2 bits (175), Expect = 5e-14
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 17/110 (15%)
Query: 6 AAHCITS----PLGKPRYVRFGLITKLSYSVTDNIHRVMQN-----------ILHPNYTT 50
AAHC+ +G VR G + RV I HP+Y
Sbjct: 66 AAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVD 125
Query: 51 EGTSQYHDIALLKIAPPVEFSETLKPACL--NRAHNVKSPTAIASGFGKL 98
+YHDIAL+++ VEF+ ++P CL G+G+
Sbjct: 126 GSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRT 175
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase,
innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila
melanogaster}
Length = 408
Score = 211 bits (539), Expect = 2e-63
Identities = 70/250 (28%), Positives = 109/250 (43%), Gaps = 32/250 (12%)
Query: 263 MAEVGFLEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLGKPRYVRFG---LITKLSY 319
MA + + + G + ++ CGG++IS Y++TAAHC+ +R G + T+
Sbjct: 133 MALLRYQQFGES----RFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDC 188
Query: 320 SVTDNIH---------RVMQNILHPNYTTEGTSQYHDIALLKIAPPVEFSETLKPACL-- 368
+ ++++H Y HDIALLK+ V F + +KP CL
Sbjct: 189 RQQGRKKKCAPPVVNVGIEKHLIHEKYDA--RHIMHDIALLKLNRSVPFQKHIKPICLPI 246
Query: 369 ---NRAHNVKSPTAIASGFGKLNYFDTKESLRLMKVVLDIINNDTCSKQ-ETTLISSQLC 424
+ + T +G+G + S L++ + + CS+ + SQLC
Sbjct: 247 TDELKEKAEQISTYFVTGWGTTE--NGSSSDVLLQANVPLQPRSACSQAYRRAVPLSQLC 304
Query: 425 ATVMAGGKDTCQGDSGGPLQTIMPDLCMYN----IIGITSYG-RQCGHANTPAIYTRVSY 479
+D+C+GDSGGPLQ L Y GI S G CG + P +YT V
Sbjct: 305 VG-GGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGE 363
Query: 480 YVPWIVHTVW 489
YV WI T+
Sbjct: 364 YVQWITDTMA 373
Score = 74.1 bits (182), Expect = 2e-14
Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 24/147 (16%)
Query: 99 NYFECTQYSKIQDESPIALAPALVGGVRYVKT-QCDILAMPMIIGGSRAKYGEFPHQCTQ 157
+ C + E+ A Y++ C + H C
Sbjct: 44 PFSSCRTIEERLTEAQKAGQKVPADYASYLQKALCGE-------------FNGVRHFCCP 90
Query: 158 YSKIQDESPIALAPALVGGVRYVRTQCDILAMPMIIGGSRAKYGEFPHQAEVGFVEEGGT 217
+ IQ S + + C + G K P A + + + G +
Sbjct: 91 SANIQHNSKVM------SLFKDENFDCGNFLSQRVSNGYEVKLSSRPWMALLRYQQFGES 144
Query: 218 MKDVKWFCGGSLISPNYVMTAAHCITS 244
++ CGG++IS Y++TAAHC+
Sbjct: 145 ----RFLCGGAMISERYILTAAHCVHG 167
Score = 71.1 bits (174), Expect = 2e-13
Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 19/110 (17%)
Query: 6 AAHCITSPLGKPRYVRFG---LITKLSYSVTDNIH---------RVMQNILHPNYTTEGT 53
AAHC+ +R G + T+ + ++++H Y
Sbjct: 161 AAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDA--R 218
Query: 54 SQYHDIALLKIAPPVEFSETLKPACL-----NRAHNVKSPTAIASGFGKL 98
HDIALLK+ V F + +KP CL + + T +G+G
Sbjct: 219 HIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTT 268
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor;
mutagenically deglycosyalted human plasma kallikrein
protease domain; HET: BAM; 1.40A {Homo sapiens} PDB:
2anw_A*
Length = 241
Score = 200 bits (512), Expect = 2e-61
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 10/213 (4%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGGSLI +V+TAAHC + + + G++ + ++ + I+H NY
Sbjct: 28 LCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKV 87
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFDTKESLR 397
+ HDIAL+K+ P+E++E KP L ++ T +G+G +
Sbjct: 88 SEGN--HDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKE-KGEIQNI 144
Query: 398 LMKVVLDIINNDTCSK--QETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNI 455
L KV + ++ N+ C K Q+ + +CA GGKD C+GDSGGPL M+ +
Sbjct: 145 LQKVNIPLVTNEECQKRYQDYKITQRMVCAGYKEGGKDACKGDSGGPLVC--KHNGMWRL 202
Query: 456 IGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+GITS+G C P +YT+V+ Y+ WI+
Sbjct: 203 VGITSWGEGCARREQPGVYTKVAEYMDWILEKT 235
Score = 70.7 bits (174), Expect = 5e-14
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC + + + G++ + ++ + I+H NY + HDIAL+K+
Sbjct: 42 AAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGN--HDIALIKL 99
Query: 65 APPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
P+E++E KP L ++ T +G+G
Sbjct: 100 QAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKE 137
Score = 61.8 bits (151), Expect = 5e-11
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
I+GG+ + +GE+P Q + + CGGSLI +V+TAAHC
Sbjct: 1 IVGGTESSWGEWPWQVSLQVKLTAQ-----RHLCGGSLIGHQWVLTAAHCFDG 48
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA
inhibitor complex, covalent inhibitor, alternative
splicing, blood coagulation; HET: INH; 1.60A {Homo
sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A*
1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A*
1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A*
2fda_A* ...
Length = 238
Score = 200 bits (512), Expect = 2e-61
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 10/213 (4%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGGS+I +++TAAHC V G++ + + V + I+H Y
Sbjct: 28 LCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKM 87
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFDTKESLR 397
+ +DIALLK+ V ++++ +P L ++ T +G+G K
Sbjct: 88 AESG--YDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKL-RDKIQNT 144
Query: 398 LMKVVLDIINNDTCSK--QETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNI 455
L K + ++ N+ C K + + +CA GGKD C+GDSGGPL ++++
Sbjct: 145 LQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSC--KHNEVWHL 202
Query: 456 IGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+GITS+G C P +YT V YV WI+
Sbjct: 203 VGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 235
Score = 69.9 bits (172), Expect = 8e-14
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC V G++ + + V + I+H Y + +DIALLK+
Sbjct: 42 AAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESG--YDIALLKL 99
Query: 65 APPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
V ++++ +P L ++ T +G+G
Sbjct: 100 ETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKL 137
Score = 58.4 bits (142), Expect = 8e-10
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
I+GG+ + GE+P Q + + CGGS+I +++TAAHC
Sbjct: 1 IVGGTASVRGEWPWQVTLHTTSPTQ-----RHLCGGSIIGNQWILTAAHCFYG 48
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase;
1.90A {Homo sapiens} PDB: 1ekb_B
Length = 235
Score = 200 bits (511), Expect = 3e-61
Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 12/215 (5%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY--VRFGLITKLSYSVTDNIHR-VMQNILHPNY 337
CG SL+S +++++AAHC+ +P GL K + + + R + + +++P+Y
Sbjct: 25 LCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHY 84
Query: 338 TTEGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFDTKES 395
+DIA++ + V +++ ++P L +G+G + Y +
Sbjct: 85 NRRRKD--NDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVY-QGTTA 141
Query: 396 LRLMKVVLDIINNDTCSKQ--ETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMY 453
L + + +++N+ C +Q E + + +CA GG D+CQGDSGGPL + +
Sbjct: 142 DILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMC--QENNRW 199
Query: 454 NIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+ G+TS+G +C N P +Y RVS + WI +
Sbjct: 200 FLAGVTSFGYECALPNRPGVYARVSRFTEWIQSFL 234
Score = 68.4 bits (168), Expect = 3e-13
Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 6 AAHCITSPLGKPRY--VRFGLITKLSYSVTDNIHR-VMQNILHPNYTTEGTSQYHDIALL 62
AAHC+ +P GL K + + + R + + +++P+Y +DIA++
Sbjct: 39 AAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKD--NDIAMM 96
Query: 63 KIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
+ V +++ ++P L +G+G + Y
Sbjct: 97 HLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVY 136
Score = 57.6 bits (140), Expect = 1e-09
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
I+GGS AK G +P + D + CG SL+S +++++AAHC+
Sbjct: 1 IVGGSDAKEGAWPWVVGL--------YYDDRLLCGASLVSSDWLVSAAHCVYG 45
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen,
hydrolase, glycoprotein, hydroxylation, phosphoprotein,
sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo
sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S
3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Length = 235
Score = 200 bits (510), Expect = 4e-61
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 10/209 (4%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FCGGS+++ +++TAAHC+ + V G T+ V++ I H N+
Sbjct: 25 FCGGSIVNEKWIVTAAHCVETG--VKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAA 82
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT---AIASGFGKLNYFDTKESL 396
+ HDIALL++ P+ + + P C+ ++ + SG+G++ + + +L
Sbjct: 83 INTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFH-KGRSAL 141
Query: 397 RLMKVVLDIINNDTCSKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNI 455
L + + +++ TC + I++ CA GG+D+CQGDSGGP T + +
Sbjct: 142 VLQYLRVPLVDRATCLRSTKFTITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGT--SFL 199
Query: 456 IGITSYGRQCGHANTPAIYTRVSYYVPWI 484
GI S+G +C IYT+VS YV WI
Sbjct: 200 TGIISWGEECAMKGKYGIYTKVSRYVNWI 228
Score = 72.2 bits (178), Expect = 1e-14
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC+ + V G T+ V++ I H N+ + HDIALL++
Sbjct: 39 AAHCVETG--VKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELD 96
Query: 66 PPVEFSETLKPACL-NRAHNVKSPT---AIASGFGKLNY 100
P+ + + P C+ ++ + SG+G++ +
Sbjct: 97 EPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFH 135
Score = 62.2 bits (152), Expect = 3e-11
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 8/54 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
++GG AK G+FP Q + V FCGGS+++ +++TAAHC+ +
Sbjct: 1 VVGGEDAKPGQFPWQVVL--------NGKVDAFCGGSIVNEKWIVTAAHCVETG 46
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen,
secreted, protease, hydrolase, polymorphism,
glycoprotein, gamma-carboxyglutamic acid; HET: BI7;
1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A*
2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D
2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B*
1lqd_B* 1nfu_A* 1nfw_A* ...
Length = 241
Score = 199 bits (509), Expect = 5e-61
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 279 KWFCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYT 338
+ FCGG+++S Y++TAAHC+ K VR G + +H V I H +T
Sbjct: 24 EGFCGGTILSEFYILTAAHCLYQA--KRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFT 81
Query: 339 TEGTSQYHDIALLKIAPPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLNYFDTK 393
E DIA+L++ P+ F + PACL + A + T I SGFG+ + +
Sbjct: 82 KETYD--FDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHE-KGE 138
Query: 394 ESLRLMKVVLDIINNDTCSKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMPDLCM 452
+S RL + + ++ ++C + +I+ CA +D CQGDSGGP T D
Sbjct: 139 QSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDT-- 196
Query: 453 YNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
Y + GI S+G C IYT+V+ ++ WI ++
Sbjct: 197 YFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232
Score = 69.2 bits (170), Expect = 2e-13
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC+ K VR G + +H V I H +T E DIA+L++
Sbjct: 40 AAHCLYQA--KRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYD--FDIAVLRLK 95
Query: 66 PPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLNY 100
P+ F + PACL + A + T I SGFG+ +
Sbjct: 96 TPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHE 135
Score = 64.9 bits (159), Expect = 4e-12
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
I+GG K GE P Q + E + FCGG+++S Y++TAAHC+
Sbjct: 1 IVGGQECKDGECPWQ--ALLINEEN-----EGFCGGTILSEFYILTAAHCLYQA 47
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase;
2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Length = 240
Score = 197 bits (503), Expect = 4e-60
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGG LI P +V+TAAHC V G + + + + I T+
Sbjct: 27 VCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTS 86
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTA-IASGFGKLNYFDTKESLRL 398
+ S +DI L+K+ + ++ +K + +++S T +G+G + + S L
Sbjct: 87 DPQS--NDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTL 144
Query: 399 MKVVLDIINNDTCSKQ-----ETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMY 453
+V + +++ C+ Q + + +CA G KD+C+GD+GGPL +C
Sbjct: 145 REVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPL------ICKG 198
Query: 454 NIIGITSYGRQCGHANTPAIYTRVS-YYVPWIVHTV 488
I S G +CG A P IYT ++ Y WI +
Sbjct: 199 VFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNL 234
Score = 65.7 bits (161), Expect = 2e-12
Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC V G + + + + I T++ S +DI L+K+
Sbjct: 41 AAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQS--NDIMLVKL 98
Query: 65 APPVEFSETLKPACLNRAHNVKSPTA-IASGFGKLNY 100
+ ++ +K + +++S T +G+G +
Sbjct: 99 QTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDP 135
Score = 57.6 bits (140), Expect = 1e-09
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
IIGG P A ++ GG CGG LI P +V+TAAHC
Sbjct: 3 IIGGKEVSPHSRPFMA---SIQYGGHH-----VCGGVLIDPQWVLTAAHCQYR 47
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate
immunity, melanin, immune system binding complex; HET:
NAG FUC; 2.00A {Holotrichia diomphalia}
Length = 394
Score = 201 bits (513), Expect = 9e-60
Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 18/250 (7%)
Query: 263 MAEVGFLEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLGKPRY--VRFGLITKLSYS 320
M V + + CGGSLI+P+ V+T AHC+ S +R G L+
Sbjct: 145 MVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEK 204
Query: 321 VTDNI--HRVMQNILHPNYTTEGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSP 377
++ Q I+H N+ + + +D+ALL + P+ ++ + CL ++ S
Sbjct: 205 ERLPYQERKIRQVIIHSNFNPK--TVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDST 262
Query: 378 TAIASGFGKLNYFDT-KESLRLMKVVLDIINNDTCSKQ--------ETTLISSQLCATVM 428
ASG+GK + + S L K+ L ++ D C + L + +CA
Sbjct: 263 ECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGG- 321
Query: 429 AGGKDTCQGDSGGPLQTIMPDL-CMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHT 487
GKDTC GD G PL P Y +GI ++G CG N P +Y V+++ WI
Sbjct: 322 EQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHFRNWIDQE 381
Query: 488 VWPDQFPNSS 497
+ +
Sbjct: 382 MQAKGLSTTP 391
Score = 71.8 bits (176), Expect = 1e-13
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 6 AAHCITSPLGKPRY--VRFGLITKLSYSVTDNI--HRVMQNILHPNYTTEGTSQYHDIAL 61
AHC+ S +R G L+ ++ Q I+H N+ + + +D+AL
Sbjct: 177 GAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPK--TVVNDVAL 234
Query: 62 LKIAPPVEFSETLKPACL-NRAHNVKSPTAIASGFGKLNYFECTQYSKI 109
L + P+ ++ + CL ++ S ASG+GK + +YS I
Sbjct: 235 LLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNI 283
Score = 69.5 bits (170), Expect = 6e-13
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 192 IIGGSR-AKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
I G + A+YGEFP V + + CGGSLI+P+ V+T AHC+ S
Sbjct: 130 ITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNS 183
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor,
hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB:
1ybw_A 2r0k_A
Length = 283
Score = 197 bits (503), Expect = 1e-59
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 21/228 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
FC GSL+ +V++AAHC + + V G + + + I + Y+
Sbjct: 59 FCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSV 118
Query: 340 EGTSQYHDIALLKIAPP----VEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNYFDTK 393
S + D+ L+++ S+ ++P CL + +G+G L+ +
Sbjct: 119 FNPSDH-DLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSG 177
Query: 394 ESLRLMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDL 450
S L + ++ ++ + CS E + + LCA D CQGDSGGPL
Sbjct: 178 YSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPL------A 231
Query: 451 CMYN----IIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTVWPDQFP 494
C N + GI S+G CG + P +YTRV+ YV WI + P +
Sbjct: 232 CEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIRPPRRL 279
Score = 63.9 bits (156), Expect = 2e-11
Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 8/102 (7%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC + + V G + + + I + Y+ S + D+ L+++
Sbjct: 73 AAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDH-DLVLIRL 131
Query: 65 APP----VEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNY 100
S+ ++P CL + +G+G L+
Sbjct: 132 KKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDE 173
Score = 54.2 bits (131), Expect = 2e-08
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCI 242
IIGGS + G P A + FC GSL+ +V++AAHC
Sbjct: 36 IIGGSSSLPGSHPWLA---------AIYIGDSFCAGSLVHTCWVVSAAHCF 77
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody,
allosteric inhibitor, EGF-like DO glycoprotein,
hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo
sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Length = 248
Score = 196 bits (500), Expect = 1e-59
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 21/230 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
FC GSL+ +V++AAHC + + V G + + + I + Y+
Sbjct: 24 FCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSV 83
Query: 340 EGTSQYHDIALLKIAPP----VEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNYFDTK 393
S + D+ L+++ S+ ++P CL + +G+G L+ +
Sbjct: 84 FNPSDH-DLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSG 142
Query: 394 ESLRLMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDL 450
S L + ++ ++ + CS E + + LCA D CQGDSGGPL
Sbjct: 143 YSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPL------A 196
Query: 451 CMYN----IIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTVWPDQFPNS 496
C N + GI S+G CG + P +YTRV+ YV WI + P + +
Sbjct: 197 CEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIRPPRRLVA 246
Score = 63.8 bits (156), Expect = 1e-11
Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 8/102 (7%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC + + V G + + + I + Y+ S + D+ L+++
Sbjct: 38 AAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDH-DLVLIRL 96
Query: 65 APP----VEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNY 100
S+ ++P CL + +G+G L+
Sbjct: 97 KKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDE 138
Score = 54.9 bits (133), Expect = 1e-08
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCI 242
IIGGS + G P A + FC GSL+ +V++AAHC
Sbjct: 1 IIGGSSSLPGSHPWLA---------AIYIGDSFCAGSLVHTCWVVSAAHCF 42
>2jde_A Urokinase-type plasminogen activator; plasminogen activation,
EGF-like domain, blood coagulation, inhibitor complex,
UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Length = 276
Score = 197 bits (502), Expect = 2e-59
Identities = 73/234 (31%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 269 LEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHR 327
+ V + CGGSL+SP +V++A HC K Y V G S + +
Sbjct: 41 IYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFE 100
Query: 328 VMQNILHPNYTTEGTSQYHDIALLKIAPP----VEFSETLKPACL-NRAHNVKSPTA-IA 381
V ILH +Y+ + + ++DIALLKI + S T++ CL + ++ + T+
Sbjct: 101 VENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEI 160
Query: 382 SGFGKLNYFDTKESLRLMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGD 438
+GFGK N D +L V+ +I++ C + + + + LCA D+CQGD
Sbjct: 161 TGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGD 220
Query: 439 SGGPLQTIMPDLCMYN----IIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
SGGPL +C + GI S+GR C + P +YTRVS+++PWI
Sbjct: 221 SGGPL------VCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 268
Score = 65.4 bits (160), Expect = 4e-12
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
A HC K Y V G S + + V ILH +Y+ + + ++DIALLKI
Sbjct: 67 ATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKI 126
Query: 65 APP----VEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNY 100
+ S T++ CL + ++ + T+ +GFGK N
Sbjct: 127 RSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENS 168
Score = 59.6 bits (145), Expect = 5e-10
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCI 242
IIGG P A + V + CGGSL+SP +V++A HC
Sbjct: 24 IIGGEFTTIENQPWFAAI---YRRHRGGSVTYVCGGSLMSPCWVISATHCF 71
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation,
fibrinolysis, plasminogen activation; HET: ABV; 1.45A
{Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U*
1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U*
2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U*
1vj9_U* 1sc8_U* ...
Length = 247
Score = 195 bits (499), Expect = 2e-59
Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 20/222 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGGSLISP +V++A HC K Y V G S + + V ILH +Y+
Sbjct: 30 VCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSA 89
Query: 340 EGTSQYHDIALLKIAPP----VEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNYFDTK 393
+ + ++DIALLKI + S T++ L + ++ + T+ +GFGK N D
Sbjct: 90 DTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYL 149
Query: 394 ESLRLMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDL 450
+L V+ +I++ C + + + + LCA D+CQGDSGGPL +
Sbjct: 150 YPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPL------V 203
Query: 451 CMYN----IIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
C + GI S+GR C + P +YTRVS+++PWI
Sbjct: 204 CSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 245
Score = 65.4 bits (160), Expect = 4e-12
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
A HC K Y V G S + + V ILH +Y+ + + ++DIALLKI
Sbjct: 44 ATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKI 103
Query: 65 APP----VEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNY 100
+ S T++ L + ++ + T+ +GFGK N
Sbjct: 104 RSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENS 145
Score = 59.6 bits (145), Expect = 3e-10
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCI 242
IIGG P A + V + CGGSLISP +V++A HC
Sbjct: 1 IIGGEFTTIENQPWFAAI---YRRHRGGSVTYVCGGSLISPCWVISATHCF 48
>1aut_C Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2
PDB: 3f6u_H*
Length = 250
Score = 195 bits (499), Expect = 2e-59
Identities = 64/232 (27%), Positives = 113/232 (48%), Gaps = 25/232 (10%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CG LI P++V+TAAHC+ K VR G + + + + +HPNY+
Sbjct: 26 ACGAVLIHPSWVLTAAHCMDES--KKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKS 83
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACL---NRAHNVKSPT---AIASGFGKLNYFDTKE 394
T +DIALL +A P S+T+ P CL A + + +G+G + + +
Sbjct: 84 TTD--NDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEA 141
Query: 395 SLR----LMKVVLDIINNDTCSKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMPD 449
L + + ++ ++ CS+ + ++S LCA ++ +D C+GDSGGP+
Sbjct: 142 KRNRTFVLNFIKIPVVPHNECSEVMSNMVSENMLCAGILGDRQDACEGDSGGPM------ 195
Query: 450 LCMYN----IIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTVWPDQFPNSS 497
+ ++ ++G+ S+G CG + +YT+VS Y+ WI + + P S
Sbjct: 196 VASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIRDKEAPQKS 247
Score = 68.1 bits (167), Expect = 5e-13
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC+ K VR G + + + + +HPNY+ T +DIALL +A
Sbjct: 40 AAHCMDES--KKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTD--NDIALLHLA 95
Query: 66 PPVEFSETLKPACL---NRAHNVKSPT---AIASGFGKLNY 100
P S+T+ P CL A + + +G+G +
Sbjct: 96 QPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSS 136
Score = 61.9 bits (151), Expect = 5e-11
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
+I G + G+ P Q V ++ K CG LI P++V+TAAHC+
Sbjct: 1 LIDGKMTRRGDSPWQ--VVLLDSKK-----KLACGAVLIHPSWVLTAAHCMDES 47
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 242
Score = 195 bits (498), Expect = 3e-59
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 279 KWFCGGSLISPNYVMTAAHCITSPLGKPRY--VRFGLITKLSYSVTDNIHRVMQNILHPN 336
G+L+ N+V+TAAH + +R G + +LS T +H
Sbjct: 21 GTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQ--AWSEAVFIHEG 78
Query: 337 YTTEGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT---AIASGFGKLNYFDT 392
YT + +DIAL+K+ V + + P CL + T ASG+G
Sbjct: 79 YTHD-AGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ--RG 135
Query: 393 KESLRLMKVVLDIINNDTCSKQETTLISSQ-------LCATVMAGGKDTCQGDSGGPLQT 445
+ LM V + I+++ C+ + LCA + +GGKD+C+GDSGG L
Sbjct: 136 FLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVF 195
Query: 446 IMPDLCMYNIIGITSYGRQ-CGHANTPAIYTRVSYYVPWIVHTV 488
+ + + + GI S+G CG A +YT+V Y+PWI + +
Sbjct: 196 LDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 239
Score = 68.0 bits (167), Expect = 4e-13
Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
Query: 6 AAHCITSPLGKPRY--VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLK 63
AAH + +R G + +LS T +H YT + +DIAL+K
Sbjct: 37 AAHAVYEQKHDASALDIRMGTLKRLSPHYTQ--AWSEAVFIHEGYTHD-AGFDNDIALIK 93
Query: 64 IAPPVEFSETLKPACL-NRAHNVKSPT---AIASGFGKLN 99
+ V + + P CL + T ASG+G
Sbjct: 94 LNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ 133
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic
resolution, hydrolase/hydrolase inhibitor complex; 1.20A
{Pontastacus leptodactylus} SCOP: b.47.1.2
Length = 237
Score = 195 bits (497), Expect = 3e-59
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY---VRFGLITKLSYSVTDNIHRVMQNILHPNY 337
FCG S+ + NY +TA HC+ + + G + ++ I V + ILH N+
Sbjct: 29 FCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHENF 88
Query: 338 TTEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESLR 397
+DI+LLK++ + F++ + P L + + I +G+G +
Sbjct: 89 DYNLLD--NDISLLKLSGSLTFNDNVAPIALPEQGHTATGDVIVTGWGTTSE-GGNTPDV 145
Query: 398 LMKVVLDIINNDTCSKQ--ETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNI 455
L KV + +++++ C ++ S +CA V GGKD+CQGDSGGPL D +
Sbjct: 146 LQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQGDSGGPLAA--SDTGSTYL 203
Query: 456 IGITSYGRQCGHANTPAIYTRVSYYVPWI 484
GI S+G C P +YT VSY+V WI
Sbjct: 204 AGIVSWGYGCARPGYPGVYTEVSYHVDWI 232
Score = 66.1 bits (162), Expect = 2e-12
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 6 AAHCITSPLGKPRY---VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALL 62
A HC+ + + G + ++ I V + ILH N+ +DI+LL
Sbjct: 43 AGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLD--NDISLL 100
Query: 63 KIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNY 100
K++ + F++ + P L + + I +G+G +
Sbjct: 101 KLSGSLTFNDNVAPIALPEQGHTATGDVIVTGWGTTSE 138
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation,
pyroglutamation, eight-membered R peptide bond,
hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Length = 238
Score = 194 bits (496), Expect = 4e-59
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FCGGS+I+ +V+ AAHC+ + G + S H V ++ NY
Sbjct: 27 FCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPA 86
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTAIASGFGKLNYFDTKESLRLM 399
+D++++K A + F + P C + A++ + SG+G +N L
Sbjct: 87 TLE--NDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLR 144
Query: 400 KVVLDIINNDTCSKQ--ETTLISSQLCATVMAG--GKDTCQGDSGGPLQTIMPDLCMYNI 455
V L+I N C T+ +CAT G +D+CQGDSGGPL +
Sbjct: 145 YVTLNITTNAFCDAVYTSDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFS-L 203
Query: 456 IGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+GI S+G C + P +Y+RV ++ WI T+
Sbjct: 204 VGIVSWGIGCA-SGYPGVYSRVGFHAGWITDTI 235
Score = 69.2 bits (170), Expect = 2e-13
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC+ + G + S H V ++ NY +D++++K A
Sbjct: 41 AAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPATLE--NDVSVIKTA 98
Query: 66 PPVEFSETLKPACL-NRAHNVKSPTAIASGFGKLNY 100
+ F + P C + A++ + SG+G +N
Sbjct: 99 VAITFDINVGPICAPDPANDYVYRKSQCSGWGTINS 134
Score = 62.6 bits (153), Expect = 3e-11
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
I+GG A+ EFP Q V FCGGS+I+ +V+ AAHC+
Sbjct: 1 IVGGIEARPYEFPWQVSVRRKSSD------SHFCGGSIINDRWVVCAAHCMQG 47
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase;
HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP:
b.47.1.2 PDB: 1fiz_A*
Length = 290
Score = 196 bits (499), Expect = 7e-59
Identities = 70/233 (30%), Positives = 101/233 (43%), Gaps = 14/233 (6%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLI-----TKLSYSVTDNIHRVMQNILH 334
CGGSL++ +++TAAHC + + FG T V + I+H
Sbjct: 31 VCGGSLLNSQWLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIH 90
Query: 335 PNYTTEGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSP--TAIASGFGKLNYFD 391
Y+ + +DIAL+KI PPV + P CL T +G+G L
Sbjct: 91 EKYSASSEA--NDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENA 148
Query: 392 TKESLRLMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMP 448
+ S L + +D+I+ C+ + S+ +CA G DTCQGDSGGPL
Sbjct: 149 RRTSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDS 208
Query: 449 DLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTVWPDQFPNSSLTTA 501
Y ++GITS+G C A P +YT Y+ WI + L TA
Sbjct: 209 AENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASKIGSTAVHMIQLPTA 261
Score = 63.2 bits (154), Expect = 3e-11
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 6 AAHCITSPLGKPRY-VRFGLI-----TKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDI 59
AAHC + + FG T V + I+H Y+ + +DI
Sbjct: 45 AAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEA--NDI 102
Query: 60 ALLKIAPPVEFSETLKPACL 79
AL+KI PPV + P CL
Sbjct: 103 ALMKITPPVTCGHFIGPGCL 122
Score = 56.6 bits (137), Expect = 4e-09
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
IIGG A +G +P + + CGGSL++ +++TAAHC
Sbjct: 1 IIGGQDAAHGAWPWMVSLQIFTYHNNRR--YHVCGGSLLNSQWLLTAAHCFRI 51
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine
proteinases, trypsin-like serine protease, tumor marker,
hydrolase; 1.61A {Homo sapiens}
Length = 232
Score = 193 bits (494), Expect = 8e-59
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CG +LI+ ++++AAHC T+ R+ FG +T + + R+ I+H Y
Sbjct: 25 RCGATLINATWLVSAAHCFTTYKNPARWTASFG-VTIKPSKMKRGLRRI---IVHEKYKH 80
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFDTKESLR 397
+DI+L +++ PV ++ + CL + ++ + +GFG L D
Sbjct: 81 PSHD--YDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKN-DGYSQNH 137
Query: 398 LMKVVLDIINNDTCSKQE--TTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMPDLCMYN 454
L + + +I+ TC++ + I+ + LCA + G D CQGDSGGPL + Y
Sbjct: 138 LRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWY- 196
Query: 455 IIGITSYGRQCGHANTPAIYTRVSYYVPWI 484
+ GI S+G +C N P +YTRV+ WI
Sbjct: 197 LAGIVSWGDECAKPNKPGVYTRVTALRDWI 226
Score = 65.7 bits (161), Expect = 2e-12
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC T+ R+ FG +T + + R+ I+H Y +DI+L ++
Sbjct: 39 AAHCFTTYKNPARWTASFG-VTIKPSKMKRGLRRI---IVHEKYKHPSHD--YDISLAEL 92
Query: 65 APPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
+ PV ++ + CL + ++ + +GFG L
Sbjct: 93 SSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKN 130
Score = 57.6 bits (140), Expect = 1e-09
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 8/53 (15%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
I+GG+ + GE+P QA + + G+ CG +LI+ ++++AAHC T+
Sbjct: 1 IVGGTEVEEGEWPWQASLQW---DGSH-----RCGATLINATWLVSAAHCFTT 45
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin
membrane, disulfide bond, glycoprotein, hydrolase,
membrane protease, secreted; 1.30A {Homo sapiens} PDB:
3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A
3dfl_A*
Length = 261
Score = 194 bits (495), Expect = 1e-58
Identities = 74/233 (31%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGGSL+S +V++AAHC S K Y V+ G SYS + + I HP+Y
Sbjct: 25 VCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQ 84
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNYFDTKES-L 396
EG+ DIALL+++ P+ FS ++P L + + +G+G + + +
Sbjct: 85 EGSQ--GDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPK 142
Query: 397 RLMKVVLDIINNDTCSKQETTLISSQ---------LCATVMAGGKDTCQGDSGGPLQTIM 447
L ++ + +I+ +TC+ + +CA + GGKD CQGDSGGPL
Sbjct: 143 PLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSC-- 200
Query: 448 PDLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTVWPDQFPNSSLTT 500
P ++ + GI S+G CG N P +YT S Y WI V Q T
Sbjct: 201 PVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQSKVTELQPRVVPQTQ 253
Score = 71.2 bits (175), Expect = 5e-14
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC S K Y V+ G SYS + + I HP+Y EG+ DIALL++
Sbjct: 39 AAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQ--GDIALLQL 96
Query: 65 APPVEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNYFECTQYSKI 109
+ P+ FS ++P L + + +G+G + K
Sbjct: 97 SRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKP 143
Score = 53.1 bits (128), Expect = 5e-08
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
I GGS A G++P Q + + G CGGSL+S +V++AAHC S
Sbjct: 1 ITGGSSAVAGQWPWQVSITY---EGVH-----VCGGSLVSEQWVLSAAHCFPSEH 47
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor
complex, serine proteinase, benzamidine phosphonate,
serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens}
PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A*
3p8g_A* 3p8f_A*
Length = 241
Score = 193 bits (493), Expect = 1e-58
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 14/218 (6%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY------VRFGLITKLSYSVTDNI-HRVMQNIL 333
CG SLISPN++++AAHC G GL + S R+ + I
Sbjct: 26 ICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIIS 85
Query: 334 HPNYTTEGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFD 391
HP + +DIALL++ P E+S ++P L + +H + +G+G Y
Sbjct: 86 HPFFNDFTFD--YDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQY-G 142
Query: 392 TKESLRLMKVVLDIINNDTCSKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMPDL 450
+L L K + +IN TC I+ + +C ++GG D+CQGDSGGPL ++ D
Sbjct: 143 GTGALILQKGEIRVINQTTCENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADG 202
Query: 451 CMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
++ G+ S+G C N P +YTR+ + WI
Sbjct: 203 RIF-QAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENT 239
Score = 61.5 bits (150), Expect = 6e-11
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 11/104 (10%)
Query: 6 AAHCITSPLGKPRY------VRFGLITKLSYSVTDNI-HRVMQNILHPNYTTEGTSQYHD 58
AAHC G GL + S R+ + I HP + +D
Sbjct: 40 AAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFD--YD 97
Query: 59 IALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
IALL++ P E+S ++P L + +H + +G+G Y
Sbjct: 98 IALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQY 141
Score = 59.5 bits (145), Expect = 3e-10
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
++GG+ A GE+P Q V G CG SLISPN++++AAHC
Sbjct: 1 VVGGTDADEGEWPWQ--VSLHALGQGH-----ICGASLISPNWLVSAAHCYIDD 47
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex,
hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2
PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H
1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H*
1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H*
...
Length = 254
Score = 194 bits (494), Expect = 2e-58
Identities = 65/232 (28%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGG+LI+ +V++AAHC G + + RV Q I+ Y
Sbjct: 25 LCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVP 84
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLNYFDTKE 394
T+ HDIALL++ PV ++ + P CL + + ++ SG+G+L
Sbjct: 85 GTTN--HDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLD-RGAT 141
Query: 395 SLRLMKVVLDIINNDTCSKQ-----ETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMP 448
+L LM + + + C +Q ++ I+ CA G KD+C+GDSGGP T
Sbjct: 142 ALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYR 201
Query: 449 DLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTVWPDQFPNSSLTT 500
+ + GI S+G+ C +YTRVS Y+ W+ + + P L
Sbjct: 202 GT--WYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSEPRPGVLLRA 251
Score = 68.0 bits (167), Expect = 5e-13
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC G + + RV Q I+ Y T+ HDIALL++
Sbjct: 39 AAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTN--HDIALLRL 96
Query: 65 APPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLNY 100
PV ++ + P CL + + ++ SG+G+L
Sbjct: 97 HQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLD 137
Score = 58.4 bits (142), Expect = 9e-10
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
I+GG GE P Q + + + CGG+LI+ +V++AAHC
Sbjct: 1 IVGGKVCPKGECPWQVLL--------LVNGAQLCGGTLINTIWVVSAAHCFDKI 46
>1fxy_A Coagulation factor XA-trypsin chimera; protease,
chloromethylketone, hydrolase-hydrolase I complex; HET:
0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Length = 228
Score = 192 bits (490), Expect = 3e-58
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
FCGG+++S Y++TAAHC+ R+ VR G + +H V I H +T
Sbjct: 26 FCGGTILSEFYILTAAHCLYQA---KRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTK 82
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESLRLM 399
E DIA+L++ P+ F + PA L A + SG+G L
Sbjct: 83 ETYD--FDIAVLRLKTPITFRMNVAPASLPTAPPATGTKCLISGWGNTASSGADYPDELQ 140
Query: 400 KVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGI 458
+ +++ C I S+ C + GGKD+CQGDSGGP+ +C + G+
Sbjct: 141 CLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPV------VCNGQLQGV 194
Query: 459 TSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
S+G C N P +YT+V YV WI +T+
Sbjct: 195 VSWGDGCAQKNKPGVYTKVYNYVKWIKNTI 224
Score = 63.7 bits (156), Expect = 1e-11
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
I+GG K GE P Q + E + FCGG+++S Y++TAAHC+
Sbjct: 1 IVGGYNCKDGEVPWQ--ALLINEEN-----EGFCGGTILSEFYILTAAHCLYQA 47
Score = 62.5 bits (153), Expect = 3e-11
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC+ R+ VR G + +H V I H +T E DIA+L++
Sbjct: 40 AAHCLYQA---KRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYD--FDIAVLRL 94
Query: 65 APPVEFSETLKPACL 79
P+ F + PA L
Sbjct: 95 KTPITFRMNVAPASL 109
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_B
Length = 251
Score = 191 bits (488), Expect = 8e-58
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 22/222 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY--------------VRFGLITKLSYSVTDNIH 326
FCGGSL+ ++++TAAHC+ L + G +L +
Sbjct: 26 FCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHL 85
Query: 327 RVMQNILHPNYTTEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGK 386
V LHP Y +D+AL+++ + + P CL + I SG+GK
Sbjct: 86 GVKHTTLHPQYDPNTFE--NDVALVELLESPVLNAFVMPICLPEGPQQEGAMVIVSGWGK 143
Query: 387 LNYFDTKESLRLMKVVLDIINNDTCSKQETTLI----SSQLCATVMAGGKDTCQGDSGGP 442
F + LM++ + I+++ TC K L +CA GGKD C GDSGGP
Sbjct: 144 Q--FLQRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGP 201
Query: 443 LQTIMPDLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWI 484
+ T+ + + ++G S+G CG + +Y+ + + WI
Sbjct: 202 MVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWI 243
Score = 61.5 bits (150), Expect = 8e-11
Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 16/107 (14%)
Query: 6 AAHCITSPLGKPRY--------------VRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 51
AAHC+ L + G +L + V LHP Y
Sbjct: 40 AAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPN 99
Query: 52 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKL 98
+D+AL+++ + + P CL + I SG+GK
Sbjct: 100 TFE--NDVALVELLESPVLNAFVMPICLPEGPQQEGAMVIVSGWGKQ 144
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood
coagulation, BLOO clotting, convertion of fibrinogen to
fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB:
1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H*
1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H*
1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Length = 259
Score = 191 bits (488), Expect = 1e-57
Identities = 65/229 (28%), Positives = 91/229 (39%), Gaps = 22/229 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY------VRFGLITKLSYSV-TDNIHRVMQNIL 333
CG SLIS +V+TAAHC+ P + VR G ++ Y + I + + +
Sbjct: 27 LCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYI 86
Query: 334 HPNYTTEGTSQYHDIALLKIAPPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLN 388
HP Y DIAL+K+ PV FS+ + P CL A ++ +G+G L
Sbjct: 87 HPRYNWRENLDR-DIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLK 145
Query: 389 YFDTKESLR-----LMKVVLDIINNDTCSKQETTLISSQ-LCA---TVMAGGKDTCQGDS 439
T + L V L I+ C I+ CA D C+GDS
Sbjct: 146 ETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDS 205
Query: 440 GGPLQTIMPDLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
GGP P + +GI S+G C YT V WI +
Sbjct: 206 GGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVI 254
Score = 66.2 bits (162), Expect = 2e-12
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 13/114 (11%)
Query: 6 AAHCITSPLGKPRY------VRFGLITKLSYSV-TDNIHRVMQNILHPNYTTEGTSQYHD 58
AAHC+ P + VR G ++ Y + I + + +HP Y D
Sbjct: 41 AAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDR-D 99
Query: 59 IALLKIAPPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLNYFECTQYS 107
IAL+K+ PV FS+ + P CL A ++ +G+G L
Sbjct: 100 IALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVG 153
Score = 62.3 bits (152), Expect = 4e-11
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
I+ GS A+ G P Q + + CG SLIS +V+TAAHC+ P
Sbjct: 1 IVEGSDAEIGMSPWQVMLFRKSPQ------ELLCGASLISDRWVLTAAHCLLYP 48
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
SCOP: b.47.1.2
Length = 242
Score = 190 bits (486), Expect = 1e-57
Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 20/222 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-----VRFGLITKLSYSVTDNIHRVMQNILHP 335
GG+L+ +++TAAH + + + V G T + + H + + +HP
Sbjct: 23 RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLG-HTNVEELMKLGNHPIRRVSVHP 81
Query: 336 NYTTEGTSQY-HDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFDT 392
+Y + + + DIALL++ V L P CL + SGFG +
Sbjct: 82 DYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE--- 138
Query: 393 KESLRLMKVVLDIINNDTC-----SKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTI 446
K + L V L + N C K + S CA + +D CQGDSGG
Sbjct: 139 KIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVR 198
Query: 447 MPDLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
P+ + GI S+G C YT+V YV WI +
Sbjct: 199 DPNTDRWVATGIVSWGIGCSRG--YGFYTKVLNYVDWIKKEM 238
Score = 70.8 bits (174), Expect = 5e-14
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 6 AAHCITSPLGKPRY-----VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQY-HDI 59
AAH + + + V G T + + H + + +HP+Y + + + DI
Sbjct: 37 AAHTLYPKEHEAQSNASLDVFLG-HTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDI 95
Query: 60 ALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
ALL++ V L P CL + SGFG +
Sbjct: 96 ALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE 138
Score = 61.1 bits (149), Expect = 9e-11
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLVGTMV 251
IIGG +AK G FP Q F G GG+L+ +++TAAH +
Sbjct: 1 IIGGQKAKMGNFPWQV---FTNIHG-------RGGGALLGDRWILTAAHTLYPKEHEAQS 50
Query: 252 KAPLRTLL 259
A L L
Sbjct: 51 NASLDVFL 58
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus}
PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A
1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A*
1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A
...
Length = 223
Score = 190 bits (484), Expect = 2e-57
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FCGGSLI+ +V++AAHC S + VR G + ++I+HP+Y +
Sbjct: 24 FCGGSLINSQWVVSAAHCYKSGI----QVRLGEDNINVVEGNEQFISASKSIVHPSYNSN 79
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESLRLMK 400
+ +DI L+K+ + + L + + SG+G T L
Sbjct: 80 TLN--NDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKC 137
Query: 401 VVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGIT 459
+ I+++ +C I S+ CA + GGKD+CQGDSGGP+ +C + GI
Sbjct: 138 LKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPV------VCSGKLQGIV 191
Query: 460 SYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
S+G C N P +YT+V YV WI T+
Sbjct: 192 SWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220
Score = 62.5 bits (153), Expect = 3e-11
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC S + VR G + ++I+HP+Y + + +DI L+K+
Sbjct: 38 AAHCYKSGI----QVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLN--NDIMLIKLK 91
Query: 66 PPVEFSETLKPACL 79
+ + L
Sbjct: 92 SAASLNSRVASISL 105
Score = 58.7 bits (143), Expect = 5e-10
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
I+GG P+Q + G FCGGSLI+ +V++AAHC S +
Sbjct: 1 IVGGYTCGANTVPYQV---SLNSGY------HFCGGSLINSQWVVSAAHCYKSGI 46
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B
1qrz_A
Length = 247
Score = 190 bits (486), Expect = 2e-57
Identities = 74/214 (34%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
FCGG+LISP +V+TAAHC+ Y V G +++ V + L P
Sbjct: 43 FCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTR-- 100
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNYFDTKESLR 397
DIALLK++ P ++ + PACL + + V T +G+G+ T +
Sbjct: 101 ------KDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ--GTFGAGL 152
Query: 398 LMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYN 454
L + L +I N C++ E + S++LCA +AGG D+CQGD+GGPL D Y
Sbjct: 153 LKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFEKDK--YI 210
Query: 455 IIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+ G+TS+G C N P +Y RVS +V WI +
Sbjct: 211 LQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 244
Score = 65.3 bits (160), Expect = 4e-12
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC+ Y V G +++ V + L P DIALLK+
Sbjct: 57 AAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTR--------KDIALLKL 108
Query: 65 APPVEFSETLKPACL 79
+ P ++ + PACL
Sbjct: 109 SSPAVITDKVIPACL 123
Score = 55.7 bits (135), Expect = 7e-09
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 11/55 (20%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKW--FCGGSLISPNYVMTAAHCITS 244
++GG A +P Q +++ FCGG+LISP +V+TAAHC+
Sbjct: 18 VVGGCVAHPHSWPWQV---------SLRTRFGMHFCGGTLISPEWVLTAAHCLEK 63
>1z8g_A Serine protease hepsin; serine protease hepsin, protease,
hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A
{Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A
1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Length = 372
Score = 194 bits (495), Expect = 2e-57
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY--VRFGLITKLS-YSVTDNIHRVMQNILHPNY 337
CGGSL+S ++V+TAAHC V G + + S + + + V + H Y
Sbjct: 142 LCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAV---VYHGGY 198
Query: 338 TTEGTSQY----HDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFD 391
+DIAL+ ++ P+ +E ++P CL + +G+G Y
Sbjct: 199 LPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQY-Y 257
Query: 392 TKESLRLMKVVLDIINNDTCSKQE--TTLISSQ-LCATVMAGGKDTCQGDSGGPL--QTI 446
+++ L + + II+ND C+ + I + CA GG D CQGDSGGP +
Sbjct: 258 GQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDS 317
Query: 447 MPDLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+ + + GI S+G C A P +YT+VS + WI +
Sbjct: 318 ISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAI 359
Score = 66.7 bits (163), Expect = 4e-12
Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 12/104 (11%)
Query: 6 AAHCITSPLGKPRY--VRFGLITKLS-YSVTDNIHRVMQNILHPNYTTEGTSQY----HD 58
AAHC V G + + S + + + V + H Y +D
Sbjct: 156 AAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAV---VYHGGYLPFRDPNSEENSND 212
Query: 59 IALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
IAL+ ++ P+ +E ++P CL + +G+G Y
Sbjct: 213 IALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQY 256
Score = 57.1 bits (138), Expect = 6e-09
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
I+GG G +P Q V +G CGGSL+S ++V+TAAHC
Sbjct: 118 IVGGRDTSLGRWPWQ--VSLRYDGAH------LCGGSLLSGDWVLTAAHCFPERN 164
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG;
0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A
1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A*
1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E
1pqa_A*
Length = 224
Score = 189 bits (483), Expect = 2e-57
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
+CGGSL++ N V+TAAHC++ +R G +++ S +T + +HP+Y+
Sbjct: 25 WCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGIT---SSLSSVRVHPSYSGN 81
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFDTKESLRL 398
+D+A+LK++ + + A L + + + A +G+G + + + L
Sbjct: 82 N----NDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNL 137
Query: 399 MKVVLDIINNDTCSK--QETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNII 456
+KV + I++ TC + + + CA V +GGKD+CQGDSGGP+ + +I
Sbjct: 138 LKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGGPI--VDSS---NTLI 192
Query: 457 GITSYGRQCGHANTPAIYTRVSYYVPWIVHT 487
G S+G C N +Y V +I
Sbjct: 193 GAVSWGNGCARPNYSGVYASVGALRSFIDTY 223
Score = 63.3 bits (155), Expect = 1e-11
Identities = 20/97 (20%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC++ +R G +++ S +T + +HP+Y+ +D+A+LK++
Sbjct: 39 AAHCVSGYAQSGFQIRAGSLSRTSGGIT---SSLSSVRVHPSYSGNN----NDLAILKLS 91
Query: 66 PPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
+ + A L + + + A +G+G +
Sbjct: 92 TSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSE 128
Score = 58.7 bits (143), Expect = 4e-10
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 8/53 (15%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
I+GG+ A G+FP V GG +CGGSL++ N V+TAAHC++
Sbjct: 1 IVGGTSASAGDFPFI--VSISRNGGP------WCGGSLLNANTVLTAAHCVSG 45
>2bdy_A Thrombin; thrombin, complex structure, hydrolase,
hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo
sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E*
1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A*
1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A*
1zgi_A* 1zgv_A* 1zrb_A* ...
Length = 289
Score = 191 bits (487), Expect = 3e-57
Identities = 65/229 (28%), Positives = 91/229 (39%), Gaps = 22/229 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY------VRFGLITKLSYSV-TDNIHRVMQNIL 333
CG SLIS +V+TAAHC+ P + VR G ++ Y + I + + +
Sbjct: 57 LCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYI 116
Query: 334 HPNYTTEGTSQYHDIALLKIAPPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLN 388
HP Y DIAL+K+ PV FS+ + P CL A ++ +G+G L
Sbjct: 117 HPRYNWRENLDR-DIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLK 175
Query: 389 YFDTKESLR-----LMKVVLDIINNDTCSKQETTLISS-QLCA---TVMAGGKDTCQGDS 439
T + L V L I+ C I+ CA D C+GDS
Sbjct: 176 ETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDS 235
Query: 440 GGPLQTIMPDLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
GGP P + +GI S+G C YT V WI +
Sbjct: 236 GGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVI 284
Score = 67.0 bits (164), Expect = 2e-12
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 13/114 (11%)
Query: 6 AAHCITSPLGKPRY------VRFGLITKLSYSV-TDNIHRVMQNILHPNYTTEGTSQYHD 58
AAHC+ P + VR G ++ Y + I + + +HP Y D
Sbjct: 71 AAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDR-D 129
Query: 59 IALLKIAPPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLNYFECTQYS 107
IAL+K+ PV FS+ + P CL A ++ +G+G L
Sbjct: 130 IALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVG 183
Score = 62.8 bits (153), Expect = 5e-11
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
I+ GS A+ G P Q + + CG SLIS +V+TAAHC+ P
Sbjct: 31 IVEGSDAEIGMSPWQVMLFRKSPQ------ELLCGASLISDRWVLTAAHCLLYP 78
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen;
HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A
3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Length = 224
Score = 188 bits (479), Expect = 1e-56
Identities = 52/208 (25%), Positives = 83/208 (39%), Gaps = 15/208 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGG+L + + V+TAAHC++ G++ S S R + + P +T
Sbjct: 21 GCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSSSAV--KVRSTKVLQAPGFTK 78
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTAIASGFGKLNYFDTKESLRL 398
E D AL+K+A P+ P T +G+G + L
Sbjct: 79 ETYG--KDWALIKLAQPINQ-----PTLKIATTTAYNQGTFTVAGWGAN-REGGSQQRYL 130
Query: 399 MKVVLDIINNDTCSKQ--ETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNII 456
+K + +++ C + + +CA +DTCQGDSGGP+ +
Sbjct: 131 LKANVPFVSDAACRSSSSFILVANEMICAGYDTKQEDTCQGDSGGPMFRKDNADEWV-QV 189
Query: 457 GITSYGRQCGHANTPAIYTRVSYYVPWI 484
GI S+G C +YT VS + I
Sbjct: 190 GIVSWGEGCARKGKYGVYTEVSTFASAI 217
Score = 63.7 bits (156), Expect = 1e-11
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLVGTMV 251
++GG+RA GEFP + CGG+L + + V+TAAHC++ T +
Sbjct: 1 VVGGTRAAQGEFPFMVRLSM------------GCGGALYAQDIVLTAAHCVSGSGNNTSI 48
Query: 252 KA 253
A
Sbjct: 49 TA 50
Score = 57.6 bits (140), Expect = 1e-09
Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 11/97 (11%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC++ G++ S S R + + P +T E D AL+K+
Sbjct: 35 AAHCVSGSGNNTSITATGGVVDLQSSSAV--KVRSTKVLQAPGFTKETYG--KDWALIKL 90
Query: 65 APPVEFSETLKPACL-NRAHNVKSPTAIASGFGKLNY 100
A P+ P T +G+G
Sbjct: 91 AQPINQ-----PTLKIATTTAYNQGTFTVAGWGANRE 122
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 198 bits (506), Expect = 1e-56
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGGS+I +++TAAHC V G++ + + V + I+H Y
Sbjct: 415 LCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKM 474
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFDTKESLR 397
+ +DIALLK+ V ++++ +P CL ++ T +G+G K
Sbjct: 475 AESG--YDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKL-RDKIQNT 531
Query: 398 LMKVVLDIINNDTCSK--QETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNI 455
L K + ++ N+ C K + + +CA GGKD C+GDSGGPL + ++++
Sbjct: 532 LQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNE--VWHL 589
Query: 456 IGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+GITS+G C P +YT V YV WI+
Sbjct: 590 VGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 622
Score = 70.6 bits (173), Expect = 5e-13
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC V G++ + + V + I+H Y + +DIALLK+
Sbjct: 429 AAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESG--YDIALLKL 486
Query: 65 APPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
V ++++ +P CL ++ T +G+G
Sbjct: 487 ETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKL 524
Score = 57.5 bits (139), Expect = 5e-09
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
I+GG+ + GE+P Q + + CGGS+I +++TAAHC
Sbjct: 388 IVGGTASVRGEWPWQVTLHTTSPTQ-----RHLCGGSIIGNQWILTAAHCFYG 435
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage,
salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar}
SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A
2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A
2eek_A
Length = 222
Score = 186 bits (476), Expect = 2e-56
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FCGGSL++ N+V++AAHC S + VR G ++ + I HPNY++
Sbjct: 24 FCGGSLVNENWVVSAAHCYKSRV----EVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSY 79
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESLRLMK 400
+DI L+K++ P + ++P L + SG+G T +S +L
Sbjct: 80 NID--NDIMLIKLSKPATLNTYVQPVALPTSCAPAGTMCTVSGWGNTMS-STADSNKLQC 136
Query: 401 VVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGIT 459
+ + I++ C+ +I ++ CA + GGKD+CQGDSGGP+ +C + G+
Sbjct: 137 LNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKDSCQGDSGGPV------VCNGELQGVV 190
Query: 460 SYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
S+G C P +Y +V + W+ T+
Sbjct: 191 SWGYGCAEPGNPGVYAKVCIFNDWLTSTM 219
Score = 62.1 bits (152), Expect = 4e-11
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC S + VR G ++ + I HPNY++ +DI L+K++
Sbjct: 38 AAHCYKSRV----EVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNID--NDIMLIKLS 91
Query: 66 PPVEFSETLKPACL 79
P + ++P L
Sbjct: 92 KPATLNTYVQPVAL 105
Score = 57.9 bits (141), Expect = 8e-10
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
I+GG K PHQ + G FCGGSL++ N+V++AAHC S +
Sbjct: 1 IVGGYECKAYSQPHQV---SLNSGY------HFCGGSLVNENWVVSAAHCYKSRV 46
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus
scrofa} SCOP: b.47.1.2
Length = 241
Score = 187 bits (477), Expect = 3e-56
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 14/216 (6%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGG+L+ ++V+TAAHCI+S Y V G + + +V + ++H ++ +
Sbjct: 29 TCGGTLVDQSWVLTAAHCISSSR---TYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNS 85
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNYFDTKESLR 397
S +DIALLK+A PV ++ ++ CL + + +G+G+L +
Sbjct: 86 NQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQT-NGASPDI 144
Query: 398 LMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYN 454
L + L +++ TCSK +T+ ++ +CA G +C GDSGGPL + +
Sbjct: 145 LQQGQLLVVDYATCSKPGWWGSTVKTNMICAG-GDGIISSCNGDSGGPLNCQGAN-GQWQ 202
Query: 455 IIGITSYGRQ--CGHANTPAIYTRVSYYVPWIVHTV 488
+ GI S+G C + + P+++TRVS Y+ WI +
Sbjct: 203 VHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVI 238
Score = 68.4 bits (168), Expect = 3e-13
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHCI+S Y V G + + +V + ++H ++ + S +DIALLK+
Sbjct: 43 AAHCISSSR---TYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKL 99
Query: 65 APPVEFSETLKPACL 79
A PV ++ ++ CL
Sbjct: 100 ASPVSLTDKIQLGCL 114
Score = 59.9 bits (146), Expect = 3e-10
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
++GG A+ +P Q + + G CGG+L+ ++V+TAAHCI+S
Sbjct: 1 VVGGEDARPNSWPWQVSLQYDSSGQWRH----TCGGTLVDQSWVLTAAHCISSS 50
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI,
protein-protein interaction, non-cognate binding, S1
pocket, primary specificity; 1.70A {Bos taurus} SCOP:
b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E
1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A
1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Length = 245
Score = 187 bits (476), Expect = 4e-56
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 12/211 (5%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FCGGSLI+ N+V+TAAHC + V G + S S ++ + + Y +
Sbjct: 41 FCGGSLINENWVVTAAHCGVTTSDV---VVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSL 97
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESLRL 398
+ +DI LLK++ FS+T+ CL A + + T + +G+G Y + RL
Sbjct: 98 TIN--NDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRL 155
Query: 399 MKVVLDIINNDTCSKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIG 457
+ L +++N C K T I +CA A G +C GDSGGPL + ++G
Sbjct: 156 QQASLPLLSNTNCKKYWGTKIKDAMICAG--ASGVSSCMGDSGGPLVC--KKNGAWTLVG 211
Query: 458 ITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
I S+G +TP +Y RV+ V W+ T+
Sbjct: 212 IVSWGSSTCSTSTPGVYARVTALVNWVQQTL 242
Score = 61.4 bits (150), Expect = 7e-11
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC + V G + S S ++ + + Y + + +DI LLK++
Sbjct: 55 AAHCGVTTSDV---VVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTIN--NDITLLKLS 109
Query: 66 PPVEFSETLKPACL 79
FS+T+ CL
Sbjct: 110 TAASFSQTVSAVCL 123
Score = 57.2 bits (139), Expect = 2e-09
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 11/56 (19%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKW--FCGGSLISPNYVMTAAHCITSP 245
I+ G A G +P Q +++D FCGGSLI+ N+V+TAAHC +
Sbjct: 16 IVNGEEAVPGSWPWQV---------SLQDKTGFHFCGGSLINENWVVTAAHCGVTT 62
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 192 bits (489), Expect = 4e-56
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 279 KWFCGGSLISPNYVMTAAHCITSPLGKPRY--VRFGLITKLSYSVTDNIHRVMQNILHPN 336
G+L+ N+V+TAAH + +R G + +LS T +H
Sbjct: 182 GTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQ--AWSEAVFIHEG 239
Query: 337 YTTEGTSQYHDIALLKIAPPVEFSETLKPACL---NRAHNVKSPT-AIASGFGKLNYFDT 392
YT + +DIAL+K+ V + + P CL +++ ASG+G
Sbjct: 240 YTHD-AGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ--RG 296
Query: 393 KESLRLMKVVLDIINNDTCSKQETTLISSQ-------LCATVMAGGKDTCQGDSGGPLQT 445
+ LM V + I+++ C+ + LCA + +GGKD+C+GDSGG L
Sbjct: 297 FLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVF 356
Query: 446 IMPDLCMYNIIGITSYGRQ-CGHANTPAIYTRVSYYVPWIVHTV 488
+ + + + GI S+G CG A +YT+V Y+PWI + +
Sbjct: 357 LDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 400
Score = 66.7 bits (163), Expect = 5e-12
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 9/100 (9%)
Query: 6 AAHCITSPLGKPRY--VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLK 63
AAH + +R G + +LS T +H YT + +DIAL+K
Sbjct: 198 AAHAVYEQKHDASALDIRMGTLKRLSPHYTQ--AWSEAVFIHEGYTHD-AGFDNDIALIK 254
Query: 64 IAPPVEFSETLKPACL---NRAHNVKSPT-AIASGFGKLN 99
+ V + + P CL +++ ASG+G
Sbjct: 255 LNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQ 294
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Length = 236
Score = 186 bits (475), Expect = 4e-56
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGGSLI +VMTAAHC+ S + V G + + I V +H + +
Sbjct: 29 TCGGSLIRQGWVMTAAHCVDSAR---TWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNS 85
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNYFDTKESLR 397
+ + +DIALL++ + ++ A L + + +G+GK + S
Sbjct: 86 DDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTST-GGPLSDS 144
Query: 398 LMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYN 454
L + L +++ TCS +T+ ++ +CA G C GDSGGPL Y
Sbjct: 145 LKQAWLPSVDHATCSSSGWWGSTVKTTMVCAG--GGANSGCNGDSGGPLNC--QVNGSYY 200
Query: 455 IIGITS--YGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+ G+TS C + P ++TRVS Y+ W+ +
Sbjct: 201 VHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGIM 236
Score = 68.8 bits (169), Expect = 2e-13
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC+ S + V G + + I V +H + ++ + +DIALL++
Sbjct: 43 AAHCVDSAR---TWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRL 99
Query: 65 APPVEFSETLKPACL 79
+ ++ A L
Sbjct: 100 NTQASLNSAVQLAAL 114
Score = 61.1 bits (149), Expect = 1e-10
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
++GG A+ +P Q + + CGGSLI +VMTAAHC+ S
Sbjct: 1 VVGGRVAQPNSWPWQISLQYKSGSSYYH----TCGGSLIRQGWVMTAAHCVDSA 50
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease,
fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Length = 252
Score = 186 bits (475), Expect = 6e-56
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 28/230 (12%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGG LIS ++++AAHC V G ++ + V + I+H +
Sbjct: 31 LCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDD 90
Query: 340 EGTSQYHDIALLKIAPP----VEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFDTK 393
+ +DIALL++ + S ++ CL + T SG+GK
Sbjct: 91 DTYD--NDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPF 148
Query: 394 ESLRLMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGG------KDTCQGDSGGPLQ 444
S RL + + + + C+ Q T+ + LCA G D CQGDSGGPL
Sbjct: 149 YSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPL- 207
Query: 445 TIMPDLCMYN----IIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTVWP 490
+C+ + ++GI S+G CG + P +YT+V+ Y+ WI + P
Sbjct: 208 -----VCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNMRP 252
Score = 62.7 bits (153), Expect = 3e-11
Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 9/102 (8%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC V G ++ + V + I+H + + +DIALL++
Sbjct: 45 AAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYD--NDIALLQL 102
Query: 65 APP----VEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
+ S ++ CL + T SG+GK
Sbjct: 103 KSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEA 144
Score = 59.6 bits (145), Expect = 3e-10
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
I GG A P Q + ++ CGG LIS ++++AAHC
Sbjct: 1 IKGGLFADIASHPWQ--AAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQE 51
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS;
1.70A {Solenopsis invicta} SCOP: b.47.1.2
Length = 222
Score = 185 bits (473), Expect = 7e-56
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CG S++ N V+TAAHC+ R V G S + +++ V +++ NY
Sbjct: 25 RCGASILDNNNVLTAAHCVDGLSNLNRLKVHVG---TNYLSESGDVYDVEDAVVNKNYDD 81
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTAIASGFGKLNYFDTKESLRL 398
+D+AL+ + P++F++ ++P L +++S +G+G L
Sbjct: 82 --FLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRL-GGNTPNAL 138
Query: 399 MKVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGI 458
++ L + C + + +I S +C + G+ C GDSGGPL + IGI
Sbjct: 139 QEIELIVHPQKQCERDQWRVIDSHICT-LTKRGEGACHGDSGGPL------VANGAQIGI 191
Query: 459 TSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
S+G C P +YTRVS +V WI +
Sbjct: 192 VSFGSPCA-LGEPDVYTRVSSFVSWINANL 220
Score = 65.3 bits (160), Expect = 3e-12
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC+ R V G S + +++ V +++ NY +D+AL+ +
Sbjct: 39 AAHCVDGLSNLNRLKVHVG---TNYLSESGDVYDVEDAVVNKNYDD--FLLRNDVALVHL 93
Query: 65 APPVEFSETLKPACL-NRAHNVKSPTAIASGFGKLNY 100
P++F++ ++P L +++S +G+G
Sbjct: 94 TNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRL 130
Score = 59.1 bits (144), Expect = 4e-10
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
I+GG A G++P+Q V G CG S++ N V+TAAHC+
Sbjct: 1 IVGGKDAPVGKYPYQ--VSLRLSGSH------RCGASILDNNNVLTAAHCVDG 45
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation,
hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC;
1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A*
2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A*
3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Length = 245
Score = 186 bits (474), Expect = 9e-56
Identities = 69/227 (30%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY--VRFGLITKLSYSVTDNIHRVMQNILHPNYT 338
FCGGSLI P +V+TAAHC+ + V+ + R+ I+HP +
Sbjct: 28 FCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRI---IVHPQFY 84
Query: 339 TEGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY-FDTKES 395
T DIALL++ PV S + L + +G+G ++
Sbjct: 85 IIQTG--ADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPP 142
Query: 396 LRLMKVVLDIINNDTCSK---------QETTLISSQ-LCATVMAGGKDTCQGDSGGPLQT 445
L +V + I+ N C + +I LCA +D+CQGDSGGPL
Sbjct: 143 FPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAG--NSQRDSCQGDSGGPLV- 199
Query: 446 IMPDLCMYN----IIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
C N G+ S+G C N P IYTRV+YY+ WI H V
Sbjct: 200 -----CKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYV 241
Score = 66.5 bits (163), Expect = 1e-12
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 7/76 (9%)
Query: 6 AAHCITSPLGKPRY--VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLK 63
AAHC+ + V+ + R+ I+HP + T DIALL+
Sbjct: 42 AAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRI---IVHPQFYIIQTG--ADIALLE 96
Query: 64 IAPPVEFSETLKPACL 79
+ PV S + L
Sbjct: 97 LEEPVNISSRVHTVML 112
Score = 58.0 bits (141), Expect = 1e-09
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKW--FCGGSLISPNYVMTAAHCITSPL 246
I+GG A ++P Q + ++D W FCGGSLI P +V+TAAHC+ +
Sbjct: 1 IVGGQEAPRSKWPWQVSL-------RVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDV 50
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A,
LUNG; chymotrypsin homology, hormone/growth factor
complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Length = 240
Score = 185 bits (473), Expect = 1e-55
Identities = 61/224 (27%), Positives = 90/224 (40%), Gaps = 19/224 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGL--ITKLSYSVTDNIHRVMQNILHPNYT 338
CGGSLI ++V+TA C S K G+ + + V Q + P
Sbjct: 24 ICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEG- 82
Query: 339 TEGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNYFDTKESL 396
D+ L+K+A P + + L N + T+ G+G
Sbjct: 83 -------SDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTG--LINYDG 133
Query: 397 RLMKVVLDIINNDTCSKQ---ETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMY 453
L L I+ N+ CS+ + TL S++CA G C+GD GGPL M
Sbjct: 134 LLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVC--EQHKMR 191
Query: 454 NIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTVWPDQFPNSS 497
++G+ GR C N P I+ RV+YY WI + + P S
Sbjct: 192 MVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILTYKVPQSH 235
Score = 57.2 bits (139), Expect = 2e-09
Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 10/76 (13%)
Query: 6 AAHCITSPLGKPRYVRFGL--ITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLK 63
A C S K G+ + + V Q + P D+ L+K
Sbjct: 38 ARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEG--------SDLVLMK 89
Query: 64 IAPPVEFSETLKPACL 79
+A P + + L
Sbjct: 90 LARPAVLDDFVSTIDL 105
Score = 51.5 bits (124), Expect = 2e-07
Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 9/53 (16%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
++ G + V CGGSLI ++V+TA C S
Sbjct: 1 VVNGIPTR-TNIGWM--VSLRYRNKH------ICGGSLIKESWVLTARQCFPS 44
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease
(elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Length = 241
Score = 185 bits (472), Expect = 1e-55
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGL--ITKLSYSVTDNIHRVMQNILHPNYT 338
CG SL+S ++A+HC+ L V GL + S + T N+ +H NY
Sbjct: 28 SCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSY---TMHENYG 84
Query: 339 TEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESL 396
S +DIA+L +A + ++ A L +N T + SG+G+ +
Sbjct: 85 AGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDG-TNNLPD 143
Query: 397 RLMKVVLDIINNDTCSKQ-----ETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLC 451
L K + +I C+ + + +C AG C GDSGGPL PD
Sbjct: 144 ILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNC--PD-G 200
Query: 452 MYNIIGITS----YGRQCGHANTPAIYTRVSYYVPWI 484
++G+TS G + P++YTRVS Y+ WI
Sbjct: 201 GTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWI 237
Score = 65.7 bits (161), Expect = 2e-12
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 6 AAHCITSPLGKPRYVRFGL--ITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLK 63
A+HC+ L V GL + S + T N+ +H NY S +DIA+L
Sbjct: 42 ASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSY---TMHENYGAGTASYSNDIAILH 98
Query: 64 IAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNY 100
+A + ++ A L +N T + SG+G+ +
Sbjct: 99 LATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDG 137
Score = 63.8 bits (156), Expect = 1e-11
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
+IGG+ A GEFP Q + + G+ CG SL+S ++A+HC+
Sbjct: 1 VIGGTNASPGEFPWQ--LSQQRQSGSWS---HSCGASLLSSTSALSASHCVDG 48
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease,
catalytic intermediate, atomic resolution,
hydrolase-hydrolase inhibitor complex; 0.94A {Sus
scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B*
1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A*
1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A*
1esa_A 1esb_A* 1est_A* ...
Length = 240
Score = 185 bits (471), Expect = 2e-55
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
CGG+LI N+VMTAAHC+ L + V G + T+ V + ++HP + T
Sbjct: 29 TCGGTLIRQNWVMTAAHCVDREL---TFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNT 85
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESLR 397
+ + +DIALL++A V + ++ L RA + + +G+G + + +
Sbjct: 86 DDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRT-NGQLAQT 144
Query: 398 LMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYN 454
L + L ++ CS +T+ +S +CA G + CQGDSGGPL Y
Sbjct: 145 LQQAYLPTVDYAICSSSSYWGSTVKNSMVCAG-GDGVRSGCQGDSGGPLHC--LVNGQYA 201
Query: 455 IIGITSYGRQ--CGHANTPAIYTRVSYYVPWIVHTV 488
+ G+TS+ + C P ++TRVS Y+ WI + +
Sbjct: 202 VHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI 237
Score = 68.8 bits (169), Expect = 2e-13
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC+ L + V G + T+ V + ++HP + T+ + +DIALL++
Sbjct: 43 AAHCVDREL---TFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRL 99
Query: 65 APPVEFSETLKPACL 79
A V + ++ L
Sbjct: 100 AQSVTLNSYVQLGVL 114
Score = 61.8 bits (151), Expect = 5e-11
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
++GG+ A+ +P Q + + CGG+LI N+VMTAAHC+ L
Sbjct: 1 VVGGTEAQRNSWPSQISLQYRSGSSWAH----TCGGTLIRQNWVMTAAHCVDREL 51
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 188 bits (479), Expect = 2e-55
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 20/222 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-----VRFGLITKLSYSVTDNIHRVMQNILHP 335
GG+L+ +++TAAH + + + V G T + + H + + +HP
Sbjct: 112 RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLG-HTNVEELMKLGNHPIRRVSVHP 170
Query: 336 NYTTEGTSQY-HDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFDT 392
+Y + + + DIALL++ V L P CL + SGFG +
Sbjct: 171 DYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE--- 227
Query: 393 KESLRLMKVVLDIINNDTC-----SKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTI 446
K + L V L + N C K + S CA + +D CQGDSGG
Sbjct: 228 KIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVR 287
Query: 447 MPDLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
P+ + GI S+G C + YT+V YV WI +
Sbjct: 288 DPNTDRWVATGIVSWGIGC--SRGYGFYTKVLNYVDWIKKEM 327
Score = 68.6 bits (168), Expect = 9e-13
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 6 AAHCITSPLGKPRY-----VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQY-HDI 59
AAH + + + V G T + + H + + +HP+Y + + + DI
Sbjct: 126 AAHTLYPKEHEAQSNASLDVFLG-HTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDI 184
Query: 60 ALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLN 99
ALL++ V L P CL + SGFG +
Sbjct: 185 ALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME 226
>2asu_B Hepatocyte growth factor-like protein; serine proteinase,
beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Length = 234
Score = 185 bits (471), Expect = 2e-55
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 19/215 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY--VRFGLIT--KLSYSVTDNIHRVMQNILHPN 336
FCGGSL+ +++TA C +S V G + + V + + P+
Sbjct: 23 FCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPS 82
Query: 337 YTTEGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTAI-ASGFGKLNYFDTKE 394
+ LLK+ V ++ + CL + V T +G+G+
Sbjct: 83 G--------SQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGN-- 132
Query: 395 SLRLMKVVLDIINNDTCSKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMPDLCMY 453
L +L++I+N C+ + + +C + C+GD GGPL +
Sbjct: 133 DTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGACEGDYGGPLAC--FTHNSW 190
Query: 454 NIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+ GI R C + PA++TRVS +V WI +
Sbjct: 191 VLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVM 225
Score = 58.4 bits (142), Expect = 7e-10
Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 12/78 (15%)
Query: 6 AAHCITSPLGKPRY--VRFGLIT--KLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIAL 61
A C +S V G + + V + + P+ + L
Sbjct: 37 ARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSG--------SQLVL 88
Query: 62 LKIAPPVEFSETLKPACL 79
LK+ V ++ + CL
Sbjct: 89 LKLERSVTLNQRVALICL 106
Score = 49.9 bits (120), Expect = 6e-07
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 14/55 (25%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKW--FCGGSLISPNYVMTAAHCITS 244
++GG G P ++++ + FCGGSL+ +++TA C +S
Sbjct: 1 VVGGHP---GNSPWTV---------SLRNRQGQHFCGGSLVKEQWILTARQCFSS 43
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase,
secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A
2zgj_A
Length = 240
Score = 185 bits (471), Expect = 2e-55
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG L+ P +V+TAAHC+ + + R + GL T S +T +I I HP Y
Sbjct: 25 LCGGVLVHPKWVLTAAHCLAQRMAQLR-LVLGLHTLDSPGLTFHIKAA---IQHPRYKPV 80
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNYFDTKESLRL 398
+ D+ALL++ V+ S T++P L ++ V + T +G+G + + S L
Sbjct: 81 PALEN-DLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQ-GGRLSRVL 138
Query: 399 MKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLC--MY 453
++ L +++ C+ +L S +C + + C+GDSGGPL +C
Sbjct: 139 RELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDSGGPL------VCGKGR 192
Query: 454 NIIGITSYG-RQCGHANTPAIYTRVSYYVPWIVHTVWPDQFP 494
+ G+ S+ R C P + T V+ YV WI
Sbjct: 193 VLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGRSALE 234
Score = 61.4 bits (150), Expect = 8e-11
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC+ + + R + GL T S +T +I I HP Y + D+ALL++
Sbjct: 39 AAHCLAQRMAQLR-LVLGLHTLDSPGLTFHIKAA---IQHPRYKPVPALEN-DLALLQLD 93
Query: 66 PPVEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNY 100
V+ S T++P L ++ V + T +G+G +
Sbjct: 94 GKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQ 130
Score = 56.8 bits (138), Expect = 3e-09
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
IIGG P+ A ++ G CGG L+ P +V+TAAHC+ +
Sbjct: 1 IIGGREVIPHSRPYMA---SLQRNG-----SHLCGGVLVHPKWVLTAAHCLAQRM 47
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease,
inhibitor, complex, protease-substrate interactions,
collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Length = 226
Score = 183 bits (468), Expect = 4e-55
Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 280 WFCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
+FCGGSLISP +++TAAHC+ V G T + +H NY +
Sbjct: 24 YFCGGSLISPEWILTAAHCMDGAGFV--DVVLGAHNIREDEATQVTIQSTDFTVHENYNS 81
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESLRLM 399
S +DIA++++ PV + + L +G+G + S L
Sbjct: 82 FVIS--NDIAVIRLPVPVTLTAAIATVGLPSTDVGVGTVVTPTGWGLPSDSALGISDVLR 139
Query: 400 KVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGIT 459
+V + I++N C + +C GGK TC GDSGGPL GIT
Sbjct: 140 QVDVPIMSNADCDAVYGIVTDGNICI-DSTGGKGTCNGDSGGPL------NYNGLTYGIT 192
Query: 460 SYGRQCG-HANTPAIYTRVSYYVPWI 484
S+G G A P +TRV+Y++ WI
Sbjct: 193 SFGAAAGCEAGYPDAFTRVTYFLDWI 218
Score = 67.5 bits (166), Expect = 5e-13
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
I+GG A +PHQ + +FCGGSLISP +++TAAHC+
Sbjct: 1 IVGGVEAVPNSWPHQ--AALFIDDM------YFCGGSLISPEWILTAAHCMDGA 46
Score = 61.0 bits (149), Expect = 8e-11
Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC+ V G T + +H NY + S +DIA++++
Sbjct: 39 AAHCMDGAGFV--DVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVIS--NDIAVIRLP 94
Query: 66 PPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNY 100
PV + + L +G+G +
Sbjct: 95 VPVTLTAAIATVGLPSTDVGVGTVVTPTGWGLPSD 129
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET:
NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB:
2aip_A*
Length = 231
Score = 183 bits (468), Expect = 5e-55
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 18/212 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHR--VMQNILHPNYT 338
CGG+LI+ +V+TA HC + + G + L D + R +
Sbjct: 24 LCGGTLINQEWVLTARHCDRGNM----RIYLG-MHNLKVLNKDALRRFPKEKYFCLNTRN 78
Query: 339 TEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTA-IASGFGKLNYFDTKESLR 397
DI L+++ PV S + P L ++ + G+G + +
Sbjct: 79 DTIWD--KDIMLIRLNRPVRNSAHIAPLSL-PSNPPSVGSVCRIMGWGTITSPNATLPDV 135
Query: 398 LMKVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIG 457
++I++ C L ++ LCA ++ GGKDTC+GDSGGPL +C G
Sbjct: 136 PHCANINILDYAVCQAAYKGLAATTLCAGILEGGKDTCKGDSGGPL------ICNGQFQG 189
Query: 458 ITSYGRQ-CGHANTPAIYTRVSYYVPWIVHTV 488
I S G C P IYT+V Y WI +
Sbjct: 190 ILSVGGNPCAQPRKPGIYTKVFDYTDWIQSII 221
Score = 58.7 bits (143), Expect = 6e-10
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 9/55 (16%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
+IGG E A V G+ CGG+LI+ +V+TA HC +
Sbjct: 1 VIGGDECNINEHRFLA---LVYANGS------LCGGTLINQEWVLTARHCDRGNM 46
Score = 55.2 bits (134), Expect = 7e-09
Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 9/76 (11%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHR--VMQNILHPNYTTEGTSQYHDIALLK 63
A HC + + G + L D + R + DI L++
Sbjct: 38 ARHCDRGNM----RIYLG-MHNLKVLNKDALRRFPKEKYFCLNTRNDTIWD--KDIMLIR 90
Query: 64 IAPPVEFSETLKPACL 79
+ PV S + P L
Sbjct: 91 LNRPVRNSAHIAPLSL 106
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 188 bits (479), Expect = 1e-54
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 20/222 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-----VRFGLITKLSYSVTDNIHRVMQNILHP 335
GG+L+ +++TAAH + + + V G T + + H + + +HP
Sbjct: 180 RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLG-HTNVEELMKLGNHPIRRVSVHP 238
Query: 336 NYTTEGTSQY-HDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFDT 392
+Y + + + DIALL++ V L P CL + SGFG +
Sbjct: 239 DYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE--- 295
Query: 393 KESLRLMKVVLDIINNDTC-----SKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTI 446
K + L V L + N C K + S CA + +D CQGDSGG
Sbjct: 296 KIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVR 355
Query: 447 MPDLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
P+ + GI S+G C + YT+V YV WI +
Sbjct: 356 DPNTDRWVATGIVSWGIGC--SRGYGFYTKVLNYVDWIKKEM 395
Score = 68.3 bits (167), Expect = 1e-12
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 6 AAHCITSPLGKPRY-----VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQY-HDI 59
AAH + + + V G T + + H + + +HP+Y + + + DI
Sbjct: 194 AAHTLYPKEHEAQSNASLDVFLG-HTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDI 252
Query: 60 ALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
ALL++ V L P CL + SGFG +
Sbjct: 253 ALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEE 295
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes
scabiei type hominis}
Length = 235
Score = 183 bits (466), Expect = 1e-54
Identities = 48/217 (22%), Positives = 91/217 (41%), Gaps = 22/217 (10%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FCGGS+++ N+V+TAA C+ + +G SY T + + I Y
Sbjct: 25 FCGGSILTANFVITAAQCVDGTKPSDISIHYGS----SYRTTKGTSVMAKKIYIVRYHPL 80
Query: 341 GTSQYHDIALLKIAPPVEFSE-TLKPACL-NRAHNVKSPT-AIASGFGKLNYFDTKESLR 397
++ A+++ P++ + T K L + ++ + T + SG+G N+ + S
Sbjct: 81 TMQ--NNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGD 138
Query: 398 LMKVVLDIINNDTCSKQETTLI------SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLC 451
LM+ +++ +C +Q + CA GD+G P +
Sbjct: 139 LMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPA------VQ 192
Query: 452 MYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
++G+ SY + P+++ RV YYV I +
Sbjct: 193 NGTLVGVASYISSMP-SEFPSVFLRVGYYVLDIKDII 228
Score = 60.7 bits (148), Expect = 1e-10
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
IIGG ++ + P VG + + K FCGGS+++ N+V+TAA C+
Sbjct: 1 IIGGKKSDITKEPWA--VGVLVDE------KPFCGGSILTANFVITAAQCVDG 45
Score = 57.2 bits (139), Expect = 2e-09
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 9/98 (9%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AA C+ + +G SY T + + I Y ++ A+++
Sbjct: 39 AAQCVDGTKPSDISIHYGS----SYRTTKGTSVMAKKIYIVRYHPLTMQ--NNYAVIETE 92
Query: 66 PPVEFSE-TLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
P++ + T K L + ++ + T + SG+G N+
Sbjct: 93 MPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNF 130
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes,
fibrinogen binding, glycosylati hydrolase; 1.43A
{Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A*
Length = 234
Score = 183 bits (466), Expect = 1e-54
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FC G+LI+ +V+TAAHC + ++ G+ +K + + + + PN +
Sbjct: 25 FCSGTLINEEWVLTAAHCDNTNF----QMKLGVHSKKVLNEDEQTRNPKEKFICPNKKND 80
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESLRLMK 400
DI L+K+ V SE + P L + G+G +
Sbjct: 81 EVLD-KDIMLIKLDSRVSNSEHIVPLSLPSSPPSVGSVCHIMGWGSITPIKVTYPDVPYC 139
Query: 401 VVLDIINNDTCSKQETTLI--SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGI 458
++++++ C L+ LCA ++ GGKDTC GDSGGPL +C GI
Sbjct: 140 AYINLLDDAVCQAGYPELLTEYRTLCAGILEGGKDTCGGDSGGPL------ICNGQFQGI 193
Query: 459 TSYGRQ-CGHANTPAIYTRVSYYVPWIVHTV 488
S+G CG P +YT+V Y WI +
Sbjct: 194 VSFGAHPCGQGLKPGVYTKVFDYNHWIQSII 224
Score = 58.3 bits (142), Expect = 7e-10
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
+IGG E V F G FC G+LI+ +V+TAAHC +
Sbjct: 1 VIGGDECNINEHRSL--VAFFNSTGF------FCSGTLINEEWVLTAAHCDNTNF 47
Score = 57.2 bits (139), Expect = 2e-09
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC + ++ G+ +K + + + + PN + DI L+K+
Sbjct: 39 AAHCDNTNF----QMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLD-KDIMLIKLD 93
Query: 66 PPVEFSETLKPACL 79
V SE + P L
Sbjct: 94 SRVSNSEHIVPLSL 107
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate
conformations, alternative splicing, glycoprotein,
hydrolase, protease, secreted; HET: K7J; 1.00A {Homo
sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Length = 224
Score = 182 bits (464), Expect = 1e-54
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG L++ +V+TAAHC + V G T + ++ HP Y+T+
Sbjct: 25 HCGGVLVNERWVLTAAHCKMNEY----TVHLGSDTLGDRRAQ--RIKASKSFRHPGYSTQ 78
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESLRLMK 400
+D+ L+K+ S +K L T SG+G D LM
Sbjct: 79 THV--NDLMLVKLNSQARLSSMVKKVRLPSRCEPPGTTCTVSGWGTTTSPDVTFPSDLMC 136
Query: 401 VVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGIT 459
V + +I+ C+K L+ +S LCA + K+ C GDSGGPL +C + G+
Sbjct: 137 VDVKLISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPL------VCRGTLQGLV 190
Query: 460 SYGR-QCGHANTPAIYTRVSYYVPWI 484
S+G CG N P +YT+V + WI
Sbjct: 191 SWGTFPCGQPNDPGVYTQVCKFTKWI 216
Score = 57.2 bits (139), Expect = 2e-09
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
II G+ G P Q V + CGG L++ +V+TAAHC +
Sbjct: 1 IIDGAPCARGSHPWQ--VALLSGNQL------HCGGVLVNERWVLTAAHCKMNEY 47
Score = 56.4 bits (137), Expect = 3e-09
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 8/74 (10%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC + V G T + ++ HP Y+T+ +D+ L+K+
Sbjct: 39 AAHCKMNEY----TVHLGSDTLGDRRAQ--RIKASKSFRHPGYSTQTHV--NDLMLVKLN 90
Query: 66 PPVEFSETLKPACL 79
S +K L
Sbjct: 91 SQARLSSMVKKVRL 104
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6,
benzamidine, protease, brain serine protease,
myelencephalon specific protease, MSP, ZYME; 1.56A {Homo
sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Length = 223
Score = 182 bits (464), Expect = 1e-54
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG LI P +V+TAAHC L V G + V++ ++HP+Y
Sbjct: 25 LCGGVLIHPLWVLTAAHCKKPNL----QVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAA 80
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESLRLMK 400
DI LL++A P + SE ++P L R + + + G+GK D +
Sbjct: 81 SHD--QDIMLLRLARPAKLSELIQPLPLERDCSANTTSCHILGWGKTA--DGDFPDTIQC 136
Query: 401 VVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGIT 459
+ +++ + C I + LCA GKD+CQGDSGGPL +C ++ G+
Sbjct: 137 AYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPL------VCGDHLRGLV 190
Query: 460 SYGRQ-CGHANTPAIYTRVSYYVPWI 484
S+G CG P +YT V Y WI
Sbjct: 191 SWGNIPCGSKEKPGVYTNVCRYTNWI 216
Score = 57.9 bits (141), Expect = 1e-09
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC L V G + V++ ++HP+Y DI LL++A
Sbjct: 39 AAHCKKPNL----QVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHD--QDIMLLRLA 92
Query: 66 PPVEFSETLKPACL 79
P + SE ++P L
Sbjct: 93 RPAKLSELIQPLPL 106
Score = 57.5 bits (140), Expect = 1e-09
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
++ G P+QA + G + CGG LI P +V+TAAHC L
Sbjct: 1 LVHGGPCDKTSHPYQA---ALYTSGHL-----LCGGVLIHPLWVLTAAHCKKPNL 47
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes
scabiei type hominis}
Length = 228
Score = 182 bits (464), Expect = 1e-54
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 19/213 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG+++S +V+TAAHC+ KP + + + + ++ Y E
Sbjct: 27 TCGGAILSQWFVLTAAHCVFDQ--KPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQE 84
Query: 341 GTSQYHDIALLKIAPPVEFSE-TLKPACL-NRAHNVKSPT-AIASGFGKLNYFDTKESLR 397
+DIA+L+++ P++ KPA L + K+ + + SG+G +
Sbjct: 85 TME--NDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQT-MDPKDHD 141
Query: 398 LMKVVLDIINNDTCSK--QETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNI 455
L L +++ D C L CA G GD+G P + +
Sbjct: 142 LKSAQLTVVDLDECRTKYGPIFLSLQVFCAQ--KVGVSLESGDAGDPT------VQQDTL 193
Query: 456 IGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+G+ +Y + P ++T+V YV WI +
Sbjct: 194 VGVAAYFPKRP-EGAPEVFTKVGSYVSWIQDII 225
Score = 59.9 bits (146), Expect = 2e-10
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 194 GGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
GG + + P V CGG+++S +V+TAAHC+
Sbjct: 2 GGEKTDIKQVPWTVAVRTYPGEE-----SLTCGGAILSQWFVLTAAHCVFD 47
Score = 58.0 bits (141), Expect = 8e-10
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC+ KP + + + + ++ Y E +DIA+L+++
Sbjct: 41 AAHCVFDQ--KPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETME--NDIAILELS 96
Query: 66 PPVEFSE-TLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
P++ KPA L + K+ + + SG+G
Sbjct: 97 RPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQT 134
>2xw9_A Complement factor D; immune system, hydrolase, serine protease,
alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB:
2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A
1fdp_A 2xwa_A 1dst_A 4d9q_A
Length = 228
Score = 182 bits (464), Expect = 2e-54
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG L++ +V++AAHC+ V G + + ++ V++ + HP+ +
Sbjct: 25 LCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPD 84
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESLRL 398
HD+ LL+++ ++P R +P +G+G +N+ + L
Sbjct: 85 TID--HDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNH-AGRRPDSL 141
Query: 399 MKVVLDIINNDTCSKQET---TLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNI 455
V+L +++ TC+++ + +CA + +D+C+GD+GGPL +C +
Sbjct: 142 QHVLLPVLDRATCNRRTHHDGAITERLMCAE--SNRRDSCKGDAGGPL------VCGGVL 193
Query: 456 IGITSYG-RQCGHANTPAIYTRVSYYVPWIVHTV 488
G+ + G R CG+ P IYTRV+ Y WI +
Sbjct: 194 EGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227
Score = 61.0 bits (149), Expect = 8e-11
Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC+ V G + + ++ V++ + HP+ + HD+ LL+++
Sbjct: 39 AAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTID--HDLLLLQLS 96
Query: 66 PPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNY 100
++P R +P +G+G +N+
Sbjct: 97 EKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNH 133
Score = 59.1 bits (144), Expect = 4e-10
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLVGTM 250
I+GG A+ P+ A V+ G CGG L++ +V++AAHC+ G +
Sbjct: 1 ILGGREAEAHARPYMA---SVQLNGAH-----LCGGVLVAEQWVLSAAHCLEDAADGKV 51
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin
binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2
PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Length = 225
Score = 181 bits (463), Expect = 2e-54
Identities = 43/206 (20%), Positives = 71/206 (34%), Gaps = 19/206 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FCGG+LI +VMTAA C S V G + ++ Y +
Sbjct: 25 FCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQ 84
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESLRL 398
+D+ LL++ + ++ L + +G+G + S
Sbjct: 85 QNL--NDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRS-GGRLSRFP 141
Query: 399 MKVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGI 458
V + + D C + +C V+ C GD G PL +C G+
Sbjct: 142 RFVNVTVTPEDQCR-------PNNVCTGVLTRRGGICNGDGGTPL------VCEGLAHGV 188
Query: 459 TSYGRQCGHANTPAIYTRVSYYVPWI 484
S+ P +TRV+ + WI
Sbjct: 189 ASFSLGPC-GRGPDFFTRVALFRDWI 213
Score = 61.0 bits (149), Expect = 9e-11
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLVGTM 250
I+GG +A+ +FP A ++ G + FCGG+LI +VMTAA C S G
Sbjct: 1 IVGGRKARPRQFPFLA---SIQNQG-----RHFCGGALIHARFVMTAASCFQSQNPGVS 51
Score = 56.8 bits (138), Expect = 2e-09
Identities = 13/97 (13%), Positives = 27/97 (27%), Gaps = 4/97 (4%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AA C S V G + ++ Y + +D+ LL++
Sbjct: 39 AASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNL--NDLMLLQLD 96
Query: 66 PPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNY 100
+ ++ L + +G+G
Sbjct: 97 REANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRS 133
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease;
1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Length = 240
Score = 181 bits (462), Expect = 4e-54
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGL--ITKLSYSVTDNIHRVMQNILHPNY 337
CGGSLI+P++V+TA HCI++ Y V G + L S +HP +
Sbjct: 27 TCGGSLIAPDWVVTAGHCISTSR---TYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLW 83
Query: 338 TTEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKES 395
+ + +DIAL+K++ + + ++ A L A ++ SG+G+L
Sbjct: 84 NSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYT-GGPLP 142
Query: 396 LRLMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCM 452
+L + +L ++ + CS+ + T+ + +CA + C GDSGGPL D
Sbjct: 143 DKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAG--GDTRSGCNGDSGGPLNCPAAD-GS 199
Query: 453 YNIIGITS--YGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+ + G+TS C P ++TRVS ++ WI T+
Sbjct: 200 WQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETI 237
Score = 64.6 bits (158), Expect = 6e-12
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 6 AAHCITSPLGKPRY-VRFGL--ITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALL 62
A HCI++ Y V G + L S +HP + + + +DIAL+
Sbjct: 41 AGHCISTSR---TYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALV 97
Query: 63 KIAPPVEFSETLKPACL 79
K++ + + ++ A L
Sbjct: 98 KLSRSAQLGDKVQLANL 114
Score = 55.3 bits (134), Expect = 8e-09
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 195 GSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
G A + Q + + ++G CGGSLI+P++V+TA HCI++
Sbjct: 2 GEDAVPYSWSWQVSLQYEKDGAFHH----TCGGSLIAPDWVVTAGHCISTS 48
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine
esterase, glycosylation, extracellular; HET: NAG; 1.75A
{Agkistrodon halys}
Length = 238
Score = 181 bits (461), Expect = 5e-54
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHR--VMQNILHPNYT 338
FCGG+LI+ +V+TAAHC ++ G + D R + +
Sbjct: 27 FCGGTLINQEWVLTAAHCDRKNF----RIKLG-MHSKKVPNEDEQTRVPKEKFFCLSSKN 81
Query: 339 TEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTA-IASGFGKLNYFDTKESLR 397
DI L+++ PV+ S+ + P L + + G+G+++ +
Sbjct: 82 YTLWD--KDIMLIRLDSPVKNSKHIAPFSL-PSSPPSVGSVCRIMGWGRISPTEGTYPDV 138
Query: 398 LMKVVLDIINNDTCSKQ----ETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMY 453
V ++++ + C E S LCA ++ GGKDTC+GDSGGPL +C
Sbjct: 139 PHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDSGGPL------ICNG 192
Query: 454 NIIGITSYGR-QCGHANTPAIYTRVSYYVPWIVHTV 488
GI S+G C + PA YT+V ++ WI + +
Sbjct: 193 QFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENII 228
Score = 60.7 bits (148), Expect = 1e-10
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
IIGG E + FCGG+LI+ +V+TAAHC
Sbjct: 1 IIGGDECNINEHRFLVALYTSRSR------TLFCGGTLINQEWVLTAAHCDRKNF 49
Score = 56.0 bits (136), Expect = 5e-09
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 9/76 (11%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHR--VMQNILHPNYTTEGTSQYHDIALLK 63
AAHC ++ G + D R + + DI L++
Sbjct: 41 AAHCDRKNF----RIKLG-MHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWD--KDIMLIR 93
Query: 64 IAPPVEFSETLKPACL 79
+ PV+ S+ + P L
Sbjct: 94 LDSPVKNSKHIAPFSL 109
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A*
4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A*
2hvx_A* 3s0n_A* 2rdl_A
Length = 226
Score = 180 bits (460), Expect = 5e-54
Identities = 65/206 (31%), Positives = 86/206 (41%), Gaps = 17/206 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FCGG LI N+V+TAAHC + V G T V++ HP Y T
Sbjct: 29 FCGGFLIRRNFVLTAAHCAGRSI----TVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTS 84
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESLRL 398
HDI LLK+ + + N P +G+G+ S L
Sbjct: 85 TLH--HDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGV-LKPGSDTL 141
Query: 399 MKVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGI 458
+V L +++ CS + QLC K +GDSGGPL LC GI
Sbjct: 142 QEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSGGPL------LCAGVAQGI 195
Query: 459 TSYGRQCGHANTPAIYTRVSYYVPWI 484
SYG A PA++TR+S+Y PWI
Sbjct: 196 VSYG--RSDAKPPAVFTRISHYRPWI 219
Score = 61.8 bits (151), Expect = 4e-11
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
IIGG+ K P+ A + V G K FCGG LI N+V+TAAHC +
Sbjct: 1 IIGGTECKPHSRPYMAYLEIVTSNGPSK----FCGGFLIRRNFVLTAAHCAGRSI 51
Score = 51.0 bits (123), Expect = 2e-07
Identities = 18/74 (24%), Positives = 24/74 (32%), Gaps = 6/74 (8%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC + V G T V++ HP Y T HDI LLK+
Sbjct: 43 AAHCAGRSI----TVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLH--HDIMLLKLK 96
Query: 66 PPVEFSETLKPACL 79
+ +
Sbjct: 97 EKASLTLAVGTLPF 110
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine
proteinase, C-terminal peptidase; 2.35A {Bos taurus}
SCOP: b.47.1.2
Length = 251
Score = 180 bits (460), Expect = 1e-53
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLIT-KLSYSVTDNIHRVMQNILHPNYT 338
CGG+LI+PN+V+TAAHCI++ L Y V G ++ V +H +
Sbjct: 42 TCGGTLITPNHVLTAAHCISNTL---TYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWN 98
Query: 339 TEGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNYFDTKESL 396
+ +DIAL+K+A VE +T++ ACL + + +G+G+L + +
Sbjct: 99 SFLVR--NDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYT-NGPIAA 155
Query: 397 RLMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMY 453
L + + +++ TCS+++ TT+ + +CA G C GDSGGPL +
Sbjct: 156 ELQQGLQPVVDYATCSQRDWWGTTVKETMVCAG-GDGVISACNGDSGGPLNC--QADGQW 212
Query: 454 NIIGITS--YGRQCGHANTPAIYTRVSYYVPWIVHTV 488
++ GI S G C P ++TRVS Y+ WI +
Sbjct: 213 DVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKL 249
Score = 62.6 bits (153), Expect = 4e-11
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 6 AAHCITSPLGKPRY-VRFGLIT-KLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLK 63
AAHCI++ L Y V G ++ V +H + + +DIAL+K
Sbjct: 56 AAHCISNTL---TYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVR--NDIALIK 110
Query: 64 IAPPVEFSETLKPACL-NRAHNVKSPT-AIASGFGKLNY 100
+A VE +T++ ACL + + +G+G+L
Sbjct: 111 LAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYT 149
Score = 59.5 bits (145), Expect = 4e-10
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 8/56 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKW--FCGGSLISPNYVMTAAHCITSP 245
++GG A +P Q + ++ + W CGG+LI+PN+V+TAAHCI++
Sbjct: 14 VVGGEDAIPHSWPWQISLQYLRDNT------WRHTCGGTLITPNHVLTAAHCISNT 63
>1cgh_A Cathepsin G; inflammation, specificity, serine protease,
hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A*
1kyn_A*
Length = 224
Score = 179 bits (457), Expect = 1e-53
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG L+ ++V+TAAHC S + V G T + I HP Y
Sbjct: 28 RCGGFLVREDFVLTAAHCWGSNI----NVTLGAHNIQRRENTQQHITARRAIRHPQYNQR 83
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESLRL 398
+DI LL+++ V + + P L RA P +G+G+++ + + L
Sbjct: 84 TIQ--NDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVS--MRRGTDTL 139
Query: 399 MKVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIG 457
+V L + + C + + Q+C K +GDSGGPL LC G
Sbjct: 140 REVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPL------LCNNVAHG 193
Query: 458 ITSYGRQCGHANTPAIYTRVSYYVPWI 484
I SYG+ G P ++TRVS ++PWI
Sbjct: 194 IVSYGKSSG--VPPEVFTRVSSFLPWI 218
Score = 61.8 bits (151), Expect = 4e-11
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
IIGG ++ P+ A + G + CGG L+ ++V+TAAHC S +
Sbjct: 1 IIGGRESRPHSRPYMAYLQIQSPAG-----QSRCGGFLVREDFVLTAAHCWGSNI 50
Score = 52.9 bits (128), Expect = 4e-08
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 6/74 (8%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC S + V G T + I HP Y +DI LL+++
Sbjct: 42 AAHCWGSNI----NVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQ--NDIMLLQLS 95
Query: 66 PPVEFSETLKPACL 79
V + + P L
Sbjct: 96 RRVRRNRNVNPVAL 109
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 185 bits (472), Expect = 2e-53
Identities = 64/229 (27%), Positives = 88/229 (38%), Gaps = 22/229 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY------VRFGLITKLSYSV-TDNIHRVMQNIL 333
CG SLIS +V+TAAHC+ P + VR G ++ Y + I + + +
Sbjct: 192 LCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYI 251
Query: 334 HPNYTTEGTSQYHDIALLKIAPPVEFSETLKPACL--NRAHNVKSPT---AIASGFGKLN 388
HP Y DIAL+K+ PV FS+ + P CL +G+G L
Sbjct: 252 HPRYNWRENL-DRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLK 310
Query: 389 YFDTKESLR-----LMKVVLDIINNDTCSKQETTLISSQ-LCA---TVMAGGKDTCQGDS 439
T + L V L I+ C I+ CA D C+GDS
Sbjct: 311 ETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDS 370
Query: 440 GGPLQTIMPDLCMYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
GGP P + +GI S+G C YT V WI +
Sbjct: 371 GGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVI 419
Score = 65.3 bits (159), Expect = 2e-11
Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 13/114 (11%)
Query: 6 AAHCITSPLGKPRY------VRFGLITKLSYSV-TDNIHRVMQNILHPNYTTEGTSQYHD 58
AAHC+ P + VR G ++ Y + I + + +HP Y D
Sbjct: 206 AAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENL-DRD 264
Query: 59 IALLKIAPPVEFSETLKPACL--NRAHNVKSPT---AIASGFGKLNYFECTQYS 107
IAL+K+ PV FS+ + P CL +G+G L
Sbjct: 265 IALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVG 318
Score = 63.3 bits (154), Expect = 7e-11
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
I+ GS A+ G P Q + + CG SLIS +V+TAAHC+ P
Sbjct: 166 IVEGSDAEIGMSPWQVMLFRKSPQ------ELLCGASLISDRWVLTAAHCLLYP 213
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG;
2.40A {Bos taurus} SCOP: b.47.1.2
Length = 227
Score = 179 bits (457), Expect = 2e-53
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG L+ ++V+TAAHC+ S + V G + T + V + I HP+Y E
Sbjct: 28 ICGGFLVREDFVLTAAHCLGSSI----NVTLGAHNIMERERTQQVIPVRRPIPHPDYNDE 83
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESLRL 398
+ +DI LLK+ + ++ + P L R+ P +G+G+L + + +L
Sbjct: 84 TLA--NDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGV-NMPSTDKL 140
Query: 399 MKVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIG 457
+V L++ + + C + I +Q+CA + K++ GDSGGPL +C G
Sbjct: 141 QEVDLEVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDSGGPL------VCNGVAQG 194
Query: 458 ITSYGRQCGHANTPAIYTRVSYYVPWI 484
I SYG TP +YTR+S ++ WI
Sbjct: 195 IVSYG--RNDGTTPDVYTRISSFLSWI 219
Score = 62.1 bits (152), Expect = 4e-11
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
IIGG AK P+ A + F G CGG L+ ++V+TAAHC+ S +
Sbjct: 1 IIGGHEAKPHSRPYMAFLLFKTSGK-----SHICGGFLVREDFVLTAAHCLGSSI 50
Score = 52.9 bits (128), Expect = 5e-08
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC+ S + V G + T + V + I HP+Y E + +DI LLK+
Sbjct: 42 AAHCLGSSI----NVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLA--NDIMLLKLT 95
Query: 66 PPVEFSETLKPACL 79
+ ++ + P L
Sbjct: 96 RKADITDKVSPINL 109
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase -
serine proteinase (GAM inactive serine proteinase
(alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP:
b.47.1.2
Length = 240
Score = 180 bits (458), Expect = 2e-53
Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNY--- 337
CGG L+ N+V+TAAHC V G L +D V + I HP++
Sbjct: 28 QCGGVLLDRNWVLTAAHCYNDKY----QVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMS 83
Query: 338 ------TTEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTA-IASGFGKLNYF 390
+D+ LL+++ P + ++ +KP L K + +ASG+G
Sbjct: 84 LLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITL-PTEEPKLGSTCLASGWGSTTPI 142
Query: 391 DTKESLRLMKVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPD 449
K L V L ++ N+ C K + + LCA M GG TC+ DSGGPL
Sbjct: 143 KFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPL------ 196
Query: 450 LCMYNIIGITSYGRQ-CGHANTPAIYTRVSYYVPWI 484
+C + GITS+G + CG P++YT++ + WI
Sbjct: 197 ICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWI 232
Score = 56.1 bits (136), Expect = 5e-09
Identities = 13/53 (24%), Positives = 17/53 (32%), Gaps = 8/53 (15%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
+ P V CGG L+ N+V+TAAHC
Sbjct: 4 PVQSQVDCENSQPWHV---AVYRFNKY-----QCGGVLLDRNWVLTAAHCYND 48
Score = 54.5 bits (132), Expect = 2e-08
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 13/83 (15%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNY---------TTEGTSQY 56
AAHC V G L +D V + I HP++
Sbjct: 42 AAHCYNDKY----QVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYS 97
Query: 57 HDIALLKIAPPVEFSETLKPACL 79
+D+ LL+++ P + ++ +KP L
Sbjct: 98 NDLMLLRLSKPADITDVVKPITL 120
>2zch_P Prostate-specific antigen; human PSA, kallikrein related
peptidases, antibodies, prostate cancer, glycoprotein,
hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens}
PDB: 2zck_P* 2zcl_P* 3qum_P*
Length = 237
Score = 179 bits (456), Expect = 3e-53
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNY--- 337
CGG L+ P +V+TAAHCI + + G + T + +V + HP Y
Sbjct: 25 VCGGVLVHPQWVLTAAHCIRNKS----VILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMS 80
Query: 338 ------TTEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTA-IASGFGKLNYF 390
G HD+ LL+++ P E ++ +K L T ASG+G +
Sbjct: 81 LLKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDL-PTQEPALGTTCYASGWGSIEPE 139
Query: 391 DTKESLRLMKVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPD 449
+ +L V L +I+ND C++ + LCA GGK TC GDSGGPL
Sbjct: 140 EFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFMLCAGRWTGGKSTCSGDSGGPL------ 193
Query: 450 LCMYNIIGITSYGRQ-CGHANTPAIYTRVSYYVPWIVHTV 488
+C + GITS+G + C P++YT+V +Y WI T+
Sbjct: 194 VCNGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTI 233
Score = 56.5 bits (137), Expect = 3e-09
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 8/53 (15%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
I+GG + P Q V G CGG L+ P +V+TAAHCI +
Sbjct: 1 IVGGWECEKHSQPWQV---LVASRGRA-----VCGGVLVHPQWVLTAAHCIRN 45
Score = 52.6 bits (127), Expect = 7e-08
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 13/83 (15%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNY---------TTEGTSQY 56
AAHCI + + G + T + +V + HP Y G
Sbjct: 39 AAHCIRNKS----VILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSS 94
Query: 57 HDIALLKIAPPVEFSETLKPACL 79
HD+ LL+++ P E ++ +K L
Sbjct: 95 HDLMLLRLSEPAELTDAVKVMDL 117
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP:
b.47.1.2
Length = 235
Score = 179 bits (456), Expect = 3e-53
Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG LI P++V+TAAHC ++ V G V Q+ HP+Y
Sbjct: 23 LCGGVLIDPSWVITAAHCYSNNY----QVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPL 78
Query: 341 GTSQY---------HDIALLKIAPPVEFSETLKPACLNRAHNVKSPTA-IASGFGKLNYF 390
+ +D+ LL ++ P + + +K L K + +ASG+G N
Sbjct: 79 IVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDL-PTKEPKVGSTCLASGWGSTNPS 137
Query: 391 DTKESLRLMKVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPD 449
+ S L V + +++N+ C + + LCA M GGKDTC GDSGGPL
Sbjct: 138 EMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPL------ 191
Query: 450 LCMYNIIGITSYGR-QCGHANTPAIYTRVSYYVPWI 484
+C + GITS G C TPAIY ++ + WI
Sbjct: 192 ICDGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWI 227
Score = 54.1 bits (131), Expect = 2e-08
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
I+GG + + P Q V CGG LI P++V+TAAHC ++
Sbjct: 1 IVGGYKCEKNSQPWQV---AVINEY-------LCGGVLIDPSWVITAAHCYSNNY 45
Score = 53.0 bits (128), Expect = 5e-08
Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 13/83 (15%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQY--------- 56
AAHC ++ V G V Q+ HP+Y +
Sbjct: 37 AAHCYSNNY----QVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHS 92
Query: 57 HDIALLKIAPPVEFSETLKPACL 79
+D+ LL ++ P + + +K L
Sbjct: 93 NDLMLLHLSEPADITGGVKVIDL 115
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG;
1.70A {Homo sapiens}
Length = 238
Score = 178 bits (455), Expect = 4e-53
Identities = 65/217 (29%), Positives = 95/217 (43%), Gaps = 24/217 (11%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNY--- 337
CGG L+ +V+TAAHCI+ + G T V ++ HP +
Sbjct: 25 QCGGILVHRQWVLTAAHCISDNY----QLWLGRHNLFDDENTAQFVHVSESFPHPGFNMS 80
Query: 338 ------TTEGTSQYHDIALLKIAPPVE-FSETLKPACLNRAHNVKSPTA-IASGFGKLNY 389
HD+ LL++ P + ++ +K L + + +ASG+G +
Sbjct: 81 LLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVEL-PTEEPEVGSTCLASGWGSIEP 139
Query: 390 FDTKESLRLMKVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMP 448
+ L V L I+ ND C K + LC + GGKDTC GDSGGPL
Sbjct: 140 ENFSFPDDLQCVDLKILPNDECKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPL----- 194
Query: 449 DLCMYNIIGITSYGRQ-CGHANTPAIYTRVSYYVPWI 484
+C + G+TS+G CG N P++ RV YV WI
Sbjct: 195 -MCDGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWI 230
Score = 59.1 bits (144), Expect = 4e-10
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
I+GG + P QA + T CGG L+ +V+TAAHCI+
Sbjct: 1 IVGGWECEQHSQPWQA---ALYHFSTF-----QCGGILVHRQWVLTAAHCISDNY 47
Score = 49.1 bits (118), Expect = 9e-07
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 14/84 (16%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNY---------TTEGTSQY 56
AAHCI+ + G T V ++ HP +
Sbjct: 39 AAHCISDNY----QLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYS 94
Query: 57 HDIALLKIAPPVE-FSETLKPACL 79
HD+ LL++ P + ++ +K L
Sbjct: 95 HDLMLLRLTEPADTITDAVKVVEL 118
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus}
SCOP: b.47.1.2
Length = 224
Score = 178 bits (454), Expect = 4e-53
Identities = 69/206 (33%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG LIS +V+TAAHC + V G T +V + I+H +Y +
Sbjct: 29 ICGGFLISRQFVLTAAHCKGREI----TVILGAHDVRKRESTQQKIKVEKQIIHESYNSV 84
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAI--ASGFGKLNYFDTKESLRL 398
HDI LLK+ VE + + L + P A+ A+G+GK S L
Sbjct: 85 PNL--HDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGV-RDPTSYTL 141
Query: 399 MKVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGI 458
+V L I++ C Q+C + GDSGGPL LC GI
Sbjct: 142 REVELRIMDEKACVDYRYYEYKFQVCVGSPTTLRAAFMGDSGGPL------LCAGVAHGI 195
Query: 459 TSYGRQCGHANTPAIYTRVSYYVPWI 484
SYG A PAI+TRVS YVPWI
Sbjct: 196 VSYG--HPDAKPPAIFTRVSTYVPWI 219
Score = 61.4 bits (150), Expect = 6e-11
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
IIGG + P+ A + V E G CGG LIS +V+TAAHC +
Sbjct: 1 IIGGVESIPHSRPYMAHLDIVTEKGLRV----ICGGFLISRQFVLTAAHCKGREI 51
Score = 51.4 bits (124), Expect = 1e-07
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC + V G T +V + I+H +Y + HDI LLK+
Sbjct: 43 AAHCKGREI----TVILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNL--HDIMLLKLE 96
Query: 66 PPVEFSETLKPACL 79
VE + + L
Sbjct: 97 KKVELTPAVNVVPL 110
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase;
1.42A {Equus caballus} SCOP: b.47.1.2
Length = 237
Score = 178 bits (455), Expect = 4e-53
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 23/216 (10%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG L+ P +V+TAAHC++ + G T H+V + L P +
Sbjct: 25 QCGGVLVHPQWVLTAAHCMSDDY----QIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLS 80
Query: 341 GTSQY---------HDIALLKIAPPVEFSETLKPACLNRAHNVKSPTA-IASGFGKLNYF 390
+ HD+ LL++A P ++ +K L K + SG+G ++ F
Sbjct: 81 LLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDL-PTQEPKLGSTCYTSGWGLISTF 139
Query: 391 DTKESLRLMKVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPD 449
+ S L V L + +N+ C++ + LCAT C GDSGG L
Sbjct: 140 TNRGSGTLQCVELRLQSNEKCARAYPEKMTEFVLCATHRDDSGSICLGDSGGAL------ 193
Query: 450 LCMYNIIGITSYGR-QCGHANTPAIYTRVSYYVPWI 484
+C GITS+G +C N ++T+V + WI
Sbjct: 194 ICDGVFQGITSWGYSECADFNDNFVFTKVMPHKKWI 229
Score = 58.8 bits (143), Expect = 6e-10
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
IIGG + P Q V G + CGG L+ P +V+TAAHC++
Sbjct: 1 IIGGWECEKHSKPWQV---AVYHQG-----HFQCGGVLVHPQWVLTAAHCMSDDY 47
Score = 51.4 bits (124), Expect = 2e-07
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 13/83 (15%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQY--------- 56
AAHC++ + G T H+V + L P + +
Sbjct: 39 AAHCMSDDY----QIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDIS 94
Query: 57 HDIALLKIAPPVEFSETLKPACL 79
HD+ LL++A P ++ +K L
Sbjct: 95 HDLMLLRLAQPARITDAVKILDL 117
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET:
NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Length = 237
Score = 178 bits (454), Expect = 6e-53
Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG L+ N+V+TAAHC V G + V ++ HP +
Sbjct: 25 ICGGVLLDRNWVLTAAHCYVDQY----EVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMS 80
Query: 341 GTSQY---------HDIALLKIAPPVEFSETLKPACLNRAHNVKSPTA-IASGFGKLNYF 390
D+ LL+++ P + ++ +KP L K + +ASG+G +
Sbjct: 81 LLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIAL-PTKEPKPGSKCLASGWGSITPT 139
Query: 391 DTKESLRLMKVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPD 449
++ L V + ++ N+ C+K + LCA M GGKDTC+ DSGGPL
Sbjct: 140 RWQKPDDLQCVFITLLPNENCAKVYLQKVTDVMLCAGEMGGGKDTCRDDSGGPL------ 193
Query: 450 LCMYNIIGITSYGRQ-CGHANTPAIYTRVSYYVPWI 484
+C + G TSYG CG PAIYT + + WI
Sbjct: 194 ICDGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWI 229
Score = 56.1 bits (136), Expect = 5e-09
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 8/53 (15%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
++GG + P Q V + CGG L+ N+V+TAAHC
Sbjct: 1 VVGGFNCEKNSQPWQ--VAVYYQKEH------ICGGVLLDRNWVLTAAHCYVD 45
Score = 54.5 bits (132), Expect = 2e-08
Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 13/83 (15%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQY--------- 56
AAHC V G + V ++ HP +
Sbjct: 39 AAHCYVDQY----EVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFS 94
Query: 57 HDIALLKIAPPVEFSETLKPACL 79
D+ LL+++ P + ++ +KP L
Sbjct: 95 DDLMLLRLSKPADITDVVKPIAL 117
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double
six-stranded beta-barrels, hydrola glycosylation; HET:
NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB:
3s9b_A* 3s9a_A* 3sbk_A*
Length = 234
Score = 178 bits (453), Expect = 6e-53
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQN-ILHPNYTT 339
C G+LI+ +V+TAAHC + ++ G+ +K + + I
Sbjct: 27 HCAGALINREWVLTAAHCDRRNI----RIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFP 82
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESLRLM 399
G DI L+++ PV +S + P L G+GK++ T
Sbjct: 83 NGLD--KDIMLIRLRRPVTYSTHIAPVSLPSRSRGVGSRCRIMGWGKIS--TTTYPDVPH 138
Query: 400 KVVLDIINNDTCSK--QETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIG 457
+ I+ + C S LCA ++ GG+DTC GDSGGPL +C + G
Sbjct: 139 CTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSGGPL------ICNGEMHG 192
Query: 458 ITSYGRQ-CGHANTPAIYTRVSYYVPWIVHTV 488
I + G + CG PA+YT+V Y WI +
Sbjct: 193 IVAGGSEPCGQHLKPAVYTKVFDYNNWIQSII 224
Score = 59.5 bits (145), Expect = 3e-10
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
++GG E P V + C G+LI+ +V+TAAHC +
Sbjct: 1 VVGGDECNINEHPFL--VALYTSASS----TIHCAGALINREWVLTAAHCDRRNI 49
Score = 54.9 bits (133), Expect = 1e-08
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 7/75 (9%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQN-ILHPNYTTEGTSQYHDIALLKI 64
AAHC + ++ G+ +K + + I G DI L+++
Sbjct: 41 AAHCDRRNI----RIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLD--KDIMLIRL 94
Query: 65 APPVEFSETLKPACL 79
PV +S + P L
Sbjct: 95 RRPVTYSTHIAPVSL 109
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 181 bits (461), Expect = 7e-53
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 27/230 (11%)
Query: 279 KWFCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYT 338
+ GG+LI+ +V+TAAH + +P + S + +HP +
Sbjct: 102 NPWAGGALINEYWVLTAAHVVEGNR-EPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWK 160
Query: 339 TEGTSQY-----HDIALLKIAPPVEFSETLKPACL-NRAHNVKSPT---AIASGFGKLNY 389
+ +DIAL+++ PV+ T+ P CL + + + SG+G+
Sbjct: 161 LLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEK 220
Query: 390 FDTKESLRLMKVVLDIINNDTCSKQETTLISSQ----------LCATVMAGGKDTCQGDS 439
D ++RL L + C + + ++ +CA G D+C+GDS
Sbjct: 221 RDR--AVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAG-GEKGMDSCKGDS 277
Query: 440 GGPLQTIMPDLC-MYNIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
GG P+ + G+ S+G QCG T +YTRV YV WI+ T+
Sbjct: 278 GGAFAVQDPNDKTKFYAAGLVSWGPQCG---TYGLYTRVKNYVDWIMKTM 324
Score = 66.7 bits (163), Expect = 3e-12
Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 10/104 (9%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQY-----HDIA 60
AAH + +P + S + +HP + + +DIA
Sbjct: 118 AAHVVEGNR-EPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIA 176
Query: 61 LLKIAPPVEFSETLKPACL-NRAHNVKSPT---AIASGFGKLNY 100
L+++ PV+ T+ P CL + + + SG+G+
Sbjct: 177 LVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEK 220
Score = 62.5 bits (152), Expect = 8e-11
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
IIGGS A FP Q + GG+LI+ +V+TAAH +
Sbjct: 83 IIGGSDADIKNFPWQVFFD-----------NPWAGGALINEYWVLTAAHVVEGN 125
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease,
zymogen; 2.50A {Mus musculus} PDB: 3g01_A
Length = 227
Score = 177 bits (452), Expect = 8e-53
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FCGG L+ +V+TAAHC + V G + T I V + I HP+Y +
Sbjct: 29 FCGGFLVRDKFVLTAAHCKGRSM----TVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPD 84
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAI--ASGFGKLNYFDTKESLRL 398
S +DI LLK+ + + ++P L R + P +G+GK+ D + L
Sbjct: 85 DRS--NDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTP-DGEFPKTL 141
Query: 399 MKVVLDIINNDTCSKQ--ETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNII 456
+V L + + C Q + ++++C + + DSGGPL +C
Sbjct: 142 HEVKLTVQKDQVCESQFQSSYNRANEICVGDSKIKGASFEEDSGGPL------VCKRAAA 195
Query: 457 GITSYGRQCGHANTPAIYTRVSYYVPWI 484
GI SYG + P ++TRV +V WI
Sbjct: 196 GIVSYG--QTDGSAPQVFTRVLSFVSWI 221
Score = 60.2 bits (147), Expect = 2e-10
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
IIGG+ P+ A F++ GG FCGG L+ +V+TAAHC
Sbjct: 1 IIGGNEISPHSRPYMAYYEFLKVGGKKM----FCGGFLVRDKFVLTAAHCKGR 49
Score = 51.4 bits (124), Expect = 2e-07
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC + V G + T I V + I HP+Y + S +DI LLK+
Sbjct: 43 AAHCKGRSM----TVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRS--NDIMLLKLV 96
Query: 66 PPVEFSETLKPACL 79
+ + ++P L
Sbjct: 97 RNAKRTRAVRPLNL 110
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural
proteo europe, spine, structural genomics, hydrolase;
HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Length = 223
Score = 177 bits (451), Expect = 1e-52
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDN--IHRVMQNILHPNYT 338
FC G L+ P +V++AAHC + + G + L + ++ HP Y
Sbjct: 25 FCSGVLVHPQWVLSAAHCFQNSY----TIGLG-LHSLEADQEPGSQMVEASLSVRHPEYN 79
Query: 339 TEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTA-IASGFGKLNYFDTKESLR 397
+ +D+ L+K+ V S+T++ + + + + + SG+G L + +
Sbjct: 80 RPLLA--NDLMLIKLDESVSESDTIRSISI-ASQCPTAGNSCLVSGWGLLA--NGRMPTV 134
Query: 398 LMKVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNII 456
L V + +++ + CSK L S CA KD+C GDSGGPL +C +
Sbjct: 135 LQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPL------ICNGYLQ 188
Query: 457 GITSYGR-QCGHANTPAIYTRVSYYVPWI 484
G+ S+G+ CG P +YT + + WI
Sbjct: 189 GLVSFGKAPCGQVGVPGVYTNLCKFTEWI 217
Score = 58.3 bits (142), Expect = 7e-10
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 8/55 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
II G P QA + + FC G L+ P +V++AAHC +
Sbjct: 1 IINGEDCSPHSQPWQA---ALVMENEL-----FCSGVLVHPQWVLSAAHCFQNSY 47
Score = 53.3 bits (129), Expect = 3e-08
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDN--IHRVMQNILHPNYTTEGTSQYHDIALLK 63
AAHC + + G + L + ++ HP Y + +D+ L+K
Sbjct: 39 AAHCFQNSY----TIGLG-LHSLEADQEPGSQMVEASLSVRHPEYNRPLLA--NDLMLIK 91
Query: 64 IAPPVEFSETLKPACL 79
+ V S+T++ +
Sbjct: 92 LDESVSESDTIRSISI 107
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor,
disease mutation glycoprotein, hydrolase, zymogen,
secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP:
b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A*
1hne_E 2rg3_A* 1b0f_A*
Length = 218
Score = 176 bits (449), Expect = 2e-52
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVM--QNILHPNYT 338
FCG +LI+PN+VM+AAHC+ + + V G + S + +V Q I Y
Sbjct: 25 FCGATLIAPNFVMSAAHCVANVNVRAVRVVLG---AHNLSRREPTRQVFAVQRIFENGYD 81
Query: 339 TEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESL 396
+DI +L++ + ++ A L +A G+G L + +
Sbjct: 82 PVNLL--NDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGR-NRGIAS 138
Query: 397 RLMKVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNII 456
L ++ + ++ + C S +C V C GDSG PL +C I
Sbjct: 139 VLQELNVTVVTS-LCR-------RSNVCTLVRGRQAGVCFGDSGSPL------VCNGLIH 184
Query: 457 GITSYGRQ-CGHANTPAIYTRVSYYVPWI 484
GI S+ R C P + V+ +V WI
Sbjct: 185 GIASFVRGGCASGLYPDAFAPVAQFVNWI 213
Score = 59.9 bits (146), Expect = 2e-10
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLVGTM 250
I+GG RA+ +P ++ G FCG +LI+PN+VM+AAHC+ + V +
Sbjct: 1 IVGGRRARPHAWPFMV---SLQLRG-----GHFCGATLIAPNFVMSAAHCVANVNVRAV 51
Score = 53.7 bits (130), Expect = 2e-08
Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 9/99 (9%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVM--QNILHPNYTTEGTSQYHDIALLK 63
AAHC+ + + V G + S + +V Q I Y +DI +L+
Sbjct: 39 AAHCVANVNVRAVRVVLG---AHNLSRREPTRQVFAVQRIFENGYDPVNLL--NDIVILQ 93
Query: 64 IAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNY 100
+ + ++ A L +A G+G L
Sbjct: 94 LNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGR 132
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus
musculus} SCOP: b.47.1.2
Length = 225
Score = 176 bits (449), Expect = 2e-52
Identities = 63/207 (30%), Positives = 90/207 (43%), Gaps = 14/207 (6%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG L+ +V+TAAHC VR G + S + +V Q+I HP Y
Sbjct: 25 ICGGVLVGDRWVLTAAHCKKQKY----SVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNS 80
Query: 341 GTSQY-HDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESLRLM 399
+ HDI L+++ + +KP L I SG+G + L
Sbjct: 81 NPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCPKVGQKCIISGWGTVTSPQENFPNTLN 140
Query: 400 KVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGI 458
+ I + + C + I +CA + G DTCQGDSGGPL +C + GI
Sbjct: 141 CAEVKIYSQNKCERAYPGKITEGMVCAGS-SNGADTCQGDSGGPL------VCDGMLQGI 193
Query: 459 TSYGR-QCGHANTPAIYTRVSYYVPWI 484
TS+G CG P +YT++ Y WI
Sbjct: 194 TSWGSDPCGKPEKPGVYTKICRYTTWI 220
Score = 57.9 bits (141), Expect = 8e-10
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 8/55 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
I+ G P QA + +G + CGG L+ +V+TAAHC
Sbjct: 1 ILEGRECIPHSQPWQA---ALFQGE-----RLICGGVLVGDRWVLTAAHCKKQKY 47
Score = 57.2 bits (139), Expect = 2e-09
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQY-HDIALLKI 64
AAHC VR G + S + +V Q+I HP Y + HDI L+++
Sbjct: 39 AAHCKKQKY----SVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRL 94
Query: 65 APPVEFSETLKPACL 79
+ +KP L
Sbjct: 95 QNSANLGDKVKPVQL 109
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation,
hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG;
2.30A {Homo sapiens} PDB: 2psy_A*
Length = 227
Score = 176 bits (448), Expect = 3e-52
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSV-TDNIHRVMQNILHPNYTT 339
+CG L+ P +++TAAHC VR G + + + +++I HP Y+
Sbjct: 26 YCGAVLVHPQWLLTAAHCRKKVF----RVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSH 81
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESLR 397
G S +D+ L+K+ + ++ ++P + + + S + SG+G
Sbjct: 82 PGHS--NDLMLIKLNRRIRPTKDVRPINV--SSHCPSAGTKCLVSGWGTTKSPQVHFPKV 137
Query: 398 LMKVVLDIINNDTCSKQETTLI-SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNII 456
L + + +++ C I + CA G+D+CQGDSGGP+ +C ++
Sbjct: 138 LQCLNISVLSQKRCEDAYPRQIDDTMFCAGD-KAGRDSCQGDSGGPV------VCNGSLQ 190
Query: 457 GITSYGRQ-CGHANTPAIYTRVSYYVPWIVHTV 488
G+ S+G C N P +YT + + WI T+
Sbjct: 191 GLVSWGDYPCARPNRPGVYTNLCKFTKWIQETI 223
Score = 58.7 bits (143), Expect = 4e-10
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
II GS P QA + + +CG L+ P +++TAAHC
Sbjct: 1 IINGSDCDMHTQPWQAAL-LLRPNQL------YCGAVLVHPQWLLTAAHCRKKVF 48
Score = 56.0 bits (136), Expect = 4e-09
Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSV-TDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC VR G + + + +++I HP Y+ G S +D+ L+K+
Sbjct: 40 AAHCRKKVF----RVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHS--NDLMLIKL 93
Query: 65 APPVEFSETLKPACL 79
+ ++ ++P +
Sbjct: 94 NRRIRPTKDVRPINV 108
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC
MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB:
1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Length = 227
Score = 175 bits (447), Expect = 4e-52
Identities = 60/208 (28%), Positives = 87/208 (41%), Gaps = 19/208 (9%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
CGG LI ++V+TAAHC S + V G T V + I HP Y +
Sbjct: 28 RCGGFLIRDDFVLTAAHCWGSSI----NVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPK 83
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESLRL 398
S +DI LL++ + + ++P L P T +G+G+ K S L
Sbjct: 84 NFS--NDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAP-LGKHSHTL 140
Query: 399 MKVVLDIINNDTCSKQETTLI--SSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNII 456
+V + + + C + +LC K + +GDSGGPL +C
Sbjct: 141 QEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDSGGPL------VCNKVAQ 194
Query: 457 GITSYGRQCGHANTPAIYTRVSYYVPWI 484
GI SYGR P T+VS +V WI
Sbjct: 195 GIVSYGRNN--GMPPRACTKVSSFVHWI 220
Score = 61.8 bits (151), Expect = 4e-11
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
IIGG AK P+ A + ++ CGG LI ++V+TAAHC S +
Sbjct: 1 IIGGHEAKPHSRPYMAYLMIWDQKS-----LKRCGGFLIRDDFVLTAAHCWGSSI 50
Score = 51.7 bits (125), Expect = 1e-07
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC S + V G T V + I HP Y + S +DI LL++
Sbjct: 42 AAHCWGSSI----NVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFS--NDIMLLQLE 95
Query: 66 PPVEFSETLKPACL 79
+ + ++P L
Sbjct: 96 RKAKRTRAVQPLRL 109
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation;
1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Length = 230
Score = 175 bits (447), Expect = 5e-52
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 280 WFCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
+CGGSLI +++TAAHC+ + V G + N R+ I H +
Sbjct: 28 VWCGGSLIDNKWILTAAHCVHDAVSV--VVYLGSAVQYEGEAVVNSERI---ISHSMFNP 82
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP----TAIASGFGKLNYFDTKES 395
+ +D+AL+KI P VE+++ ++P L + + A SG+G+ N ++
Sbjct: 83 --DTYLNDVALIKI-PHVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSN----TDT 135
Query: 396 LRLMKVVLDIINNDTCSKQ--ETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMY 453
+ L +I+ND C+++ ++ S +C + GK C GDSGGP +
Sbjct: 136 VILQYTYNLVIDNDRCAQEYPPGIIVESTICG-DTSDGKSPCFGDSGGPF--------VL 186
Query: 454 N----IIGITSYGRQCG-HANTPAIYTRVSYYVPWI 484
+ +IG+ S+ G + P ++RV+ Y+ WI
Sbjct: 187 SDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWI 222
Score = 73.0 bits (180), Expect = 8e-15
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
II G A G FP+QA + + + +CGGSLI +++TAAHC+
Sbjct: 1 IINGYEAYTGLFPYQAGLDITLQDQR----RVWCGGSLIDNKWILTAAHCVHDA 50
Score = 61.1 bits (149), Expect = 9e-11
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC+ + V G + N R+ I H + + +D+AL+KI
Sbjct: 43 AAHCVHDAVSV--VVYLGSAVQYEGEAVVNSERI---ISHSMFNP--DTYLNDVALIKI- 94
Query: 66 PPVEFSETLKPACLNRAHNVKSP----TAIASGFGKLN 99
P VE+++ ++P L + + A SG+G+ N
Sbjct: 95 PHVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSN 132
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Length = 234
Score = 175 bits (445), Expect = 1e-51
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
C G+LI+ ++V+TAAHC R V G + T I V + +P Y
Sbjct: 25 ICAGALIAKDWVLTAAHCNL----NKRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDP 80
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAI--ASGFGKLNYFDTKESLR 397
D+ LL++ + ++ + L + + P + +G+G+ + S
Sbjct: 81 ATRE--GDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHN-SASWSDT 137
Query: 398 LMKVVLDIINNDTCSKQET-----TLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCM 452
L +V + II+ C+ + + + +CA + GG+D+C GDSG PL LC
Sbjct: 138 LREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPL------LCE 191
Query: 453 YNIIGITSYGRQ--CGHANTPAIYTRVS-YYVPWI 484
G+TS+G + CG P +Y +S ++ WI
Sbjct: 192 GVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWI 226
Score = 58.3 bits (142), Expect = 7e-10
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
IIGG+ P+ + K C G+LI+ ++V+TAAHC +
Sbjct: 1 IIGGNEVTPHSRPYMV---LLSLDR-----KTICAGALIAKDWVLTAAHCNLNK 46
Score = 53.3 bits (129), Expect = 4e-08
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC R V G + T I V + +P Y D+ LL++
Sbjct: 39 AAHCNL----NKRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATRE--GDLKLLQL 92
Query: 65 APPVEFSETLKPACL 79
+ ++ + L
Sbjct: 93 TEKAKINKYVTILHL 107
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease
inhibitor, protease, GLYC secreted, serine protease
inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo
sapiens}
Length = 283
Score = 173 bits (440), Expect = 2e-50
Identities = 38/216 (17%), Positives = 74/216 (34%), Gaps = 30/216 (13%)
Query: 279 KWFCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYT 338
K FCGG +I N+V+T A C + V+ + I V +H Y
Sbjct: 76 KDFCGGVIIRENFVLTTAKCSLLH--RNITVKTYFNRTSQDPLMIKITHV---HVHMRYD 130
Query: 339 TEGTSQYHDIALLKIAPPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLNYFDTK 393
+ +D++LL++ P++ P C + A ++ P + SG+ + T
Sbjct: 131 ADAGE--NDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNG---TD 185
Query: 394 ESLRLMKVVLDIINNDTCSKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMPDLCM 452
L + ++ + C + ++++ C G +
Sbjct: 186 LGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCE---RSSVAAMHWMDGSVV------TRE 236
Query: 453 YN----IIGITSYGRQCGHANTPAIYTRVSYYVPWI 484
+ + G+ G + T+VS Y W
Sbjct: 237 HRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLWF 271
Score = 61.6 bits (150), Expect = 9e-11
Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 12/99 (12%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
A C + V+ + I V +H Y + +D++LL++
Sbjct: 92 TAKCSLLH--RNITVKTYFNRTSQDPLMIKITHV---HVHMRYDADAGE--NDLSLLELE 144
Query: 66 PPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLN 99
P++ P C + A ++ P + SG+ +
Sbjct: 145 WPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNG 183
Score = 56.2 bits (136), Expect = 6e-09
Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 10/95 (10%)
Query: 154 QCTQYSKIQDESPI---ALAPALVGGVRYVRTQCDILAMPMIIGGSRAKYGEFPHQAEVG 210
C + ES A L + + + P Q ++
Sbjct: 12 GCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVLTSEKRAPDLQDLPWQVKL- 70
Query: 211 FVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
T + K FCGG +I N+V+T A C
Sbjct: 71 ------TNSEGKDFCGGVIIRENFVLTTAKCSLLH 99
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor
complex, blood coagulation, CL PAIR of basic residues,
disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A
{Homo sapiens}
Length = 317
Score = 172 bits (439), Expect = 7e-50
Identities = 38/216 (17%), Positives = 74/216 (34%), Gaps = 30/216 (13%)
Query: 279 KWFCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYT 338
K FCGG +I N+V+T A C + V+ + I V +H Y
Sbjct: 117 KDFCGGVIIRENFVLTTAKCSLLH--RNITVKTYFNRTSQDPLMIKITHV---HVHMRYD 171
Query: 339 TEGTSQYHDIALLKIAPPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLNYFDTK 393
+ +D++LL++ P++ P C + A ++ P + SG+ + T
Sbjct: 172 ADAGE--NDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNG---TD 226
Query: 394 ESLRLMKVVLDIINNDTCSKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMPDLCM 452
L + ++ + C + ++++ C G +
Sbjct: 227 LGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCE---RSSVAAMHWMDGSVV------TRE 277
Query: 453 YN----IIGITSYGRQCGHANTPAIYTRVSYYVPWI 484
+ + G+ G + T+VS Y W
Sbjct: 278 HRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLWF 312
Score = 61.3 bits (149), Expect = 2e-10
Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 12/99 (12%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
A C + V+ + I V +H Y + +D++LL++
Sbjct: 133 TAKCSLLH--RNITVKTYFNRTSQDPLMIKITHV---HVHMRYDADAGE--NDLSLLELE 185
Query: 66 PPVEFSETLKPACL---NRAHNVKSP--TAIASGFGKLN 99
P++ P C + A ++ P + SG+ +
Sbjct: 186 WPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNG 224
Score = 57.4 bits (139), Expect = 3e-09
Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 7/56 (12%)
Query: 190 PMIIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
+ + P Q V G K FCGG +I N+V+T A C
Sbjct: 92 VLTSEKRAPDLQDLPWQ--VKLTNSEG-----KDFCGGVIIRENFVLTTAKCSLLH 140
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein,
zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo
sapiens} SCOP: b.47.1.2
Length = 221
Score = 169 bits (431), Expect = 8e-50
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FCGG+LI P++V+TAAHC+ + V G + T V Q L+ Y E
Sbjct: 28 FCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNN-YDAE 86
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSP--TAIASGFGKLNYFDTKESLRL 398
+DI L++++ P S ++ L + +A G+G++ + L
Sbjct: 87 NKL--NDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGA-HDPPAQVL 143
Query: 399 MKVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGI 458
++ + ++ C +C V C GDSGGPL +C I GI
Sbjct: 144 QELNVTVVTF-FCR-------PHNICTFVPRRKAGICFGDSGGPL------ICDGIIQGI 189
Query: 459 TSYGRQ-CGHANTPAIYTRVSYYVPWI 484
S+ C P +TRV+ YV WI
Sbjct: 190 DSFVIWGCATRLFPDFFTRVALYVDWI 216
Score = 62.9 bits (154), Expect = 2e-11
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLVGTM 250
I+GG A+ P+ A + G FCGG+LI P++V+TAAHC+ +
Sbjct: 1 IVGGHEAQPHSRPYMASLQMRGNPG-----SHFCGGTLIHPSFVLTAAHCLRDIPQRLV 54
Score = 47.5 bits (114), Expect = 3e-06
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC+ + V G + T V Q L+ Y E +DI L++++
Sbjct: 42 AAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNN-YDAENKL--NDILLIQLS 98
Query: 66 PPVEFSETLKPACL 79
P S ++ L
Sbjct: 99 SPANLSASVATVQL 112
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 178 bits (454), Expect = 9e-50
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 12/215 (5%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTD-NIHRVMQNILHPNYTT 339
CGG I +++TAAHC+ + + ++ + + I V + I H NY
Sbjct: 346 TCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNA 405
Query: 340 EGTSQYHDIALLKIAPPVEFSETL----KPACL-NRAHNVKSPT-AIASGFGKLNYFDTK 393
+DIAL+++ + PAC+ + + I SG+G+ +
Sbjct: 406 GTYQ--NDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERV 463
Query: 394 ESLRLMKVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMY 453
SL+ + +I+N + CA G D C+GDSGGPL + + Y
Sbjct: 464 FSLQ--WGEVKLISNCSKFYGNRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTY 521
Query: 454 NIIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+ G+ S+G CG P +YT+V+ Y WI + V
Sbjct: 522 -VWGVVSWGENCGKPEFPGVYTKVANYFDWISYHV 555
Score = 61.1 bits (148), Expect = 5e-10
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTD-NIHRVMQNILHPNYTTEGTSQYHDIALLKI 64
AAHC+ + + ++ + + I V + I H NY +DIAL+++
Sbjct: 360 AAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQ--NDIALIEM 417
Query: 65 APPVEFSETL----KPACL-NRAHNVKSPT-AIASGFGKLNY 100
+ PAC+ + + I SG+G+
Sbjct: 418 KKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKD 459
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 173 bits (440), Expect = 8e-47
Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
FCGG+LISP +V+TAAHC+ Y V G +++ V + L P
Sbjct: 587 FCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTR-- 644
Query: 340 EGTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNYFDTKESLR 397
DIALLK++ P ++ + PACL + + V T +G+G+ T +
Sbjct: 645 ------KDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQ--GTFGAGL 696
Query: 398 LMKVVLDIINNDTCSKQE---TTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYN 454
L + L +I N C++ E + S++LCA +AGG D+CQGDSGGPL D Y
Sbjct: 697 LKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKD--KYI 754
Query: 455 IIGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+ G+TS+G C N P +Y RVS +V WI +
Sbjct: 755 LQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 788
Score = 62.4 bits (151), Expect = 2e-10
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 5 HAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLK 63
AAHC+ Y V G +++ V + L P DIALLK
Sbjct: 600 TAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTR--------KDIALLK 651
Query: 64 IAPPVEFSETLKPACL 79
++ P ++ + PACL
Sbjct: 652 LSSPAVITDKVIPACL 667
Score = 48.1 bits (114), Expect = 6e-06
Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 14/94 (14%)
Query: 152 PHQCTQYSKIQDESPIALAPALVGGVRYVRTQCDILAMPMIIGGSRAKYGEFPHQAEVGF 211
P + Y + + + ++GG A +P Q +
Sbjct: 529 PRKLYDYCDVPQCAAPSFDC-------GKPQVEPKKCPGRVVGGCVAHPHSWPWQVSL-- 579
Query: 212 VEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
+ FCGG+LISP +V+TAAHC+
Sbjct: 580 -----RTRFGMHFCGGTLISPEWVLTAAHCLEKS 608
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP:
b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Length = 497
Score = 162 bits (411), Expect = 3e-44
Identities = 51/253 (20%), Positives = 96/253 (37%), Gaps = 59/253 (23%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
C G+++S +V+TAAHC T + V G + + + HPNY
Sbjct: 243 SCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRD--------LEIEVVLFHPNYNI 294
Query: 340 EGTSQ-------YHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAI-------ASGFG 385
G + +D+AL+K+ +++ +T++P CL +
Sbjct: 295 NGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEE 354
Query: 386 KLNY------FDTKESLRLMKVVLDIINNDTCS---------------KQETTLISSQ-L 423
L F ++E +L + + I N D K + +++ + L
Sbjct: 355 LLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFL 414
Query: 424 CATVMAG--GKDTCQGDSGGPLQTIMPDLCMYNIIGITSYGRQCG----------HANTP 471
C ++ +TC+GDSGGPL I+ + +G+ S+G A+
Sbjct: 415 CTGGVSPYADPNTCRGDSGGPL--IVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHAR 472
Query: 472 AIYTRVSYYVPWI 484
+ + +PW+
Sbjct: 473 DFHINLFQVLPWL 485
Score = 66.1 bits (161), Expect = 1e-11
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 16/82 (19%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQ-------YH 57
AAHC T + V G + + + HPNY G + +
Sbjct: 257 AAHCFTVDDKEHSIKVSVGGEKRD--------LEIEVVLFHPNYNINGKKEAGIPEFYDY 308
Query: 58 DIALLKIAPPVEFSETLKPACL 79
D+AL+K+ +++ +T++P CL
Sbjct: 309 DVALIKLKNKLKYGQTIRPICL 330
Score = 54.1 bits (130), Expect = 6e-08
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 194 GGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
Y + P QA++ + + C G+++S +V+TAAHC T
Sbjct: 217 HRKGTDYHKQPWQAKISVIRPSKGHE----SCMGAVVSEYFVLTAAHCFTVDD 265
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human
complement system, glycoprotein, SP, VWFA,; HET: NAG;
1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Length = 509
Score = 150 bits (380), Expect = 6e-40
Identities = 48/256 (18%), Positives = 85/256 (33%), Gaps = 59/256 (23%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
C G+LIS +V+TAAHC + V G K + + + ++ P +
Sbjct: 248 TCRGALISDQWVLTAAHCFRDGNDHSLWRVNVG-DPKSQWGKE---FLIEKAVISPGFDV 303
Query: 340 EGTSQY-------HDIALLKIAPPVEFSETLKPACL------NRAHNVKSPTA-IASGFG 385
DIALLK+A V+ S +P CL N A +
Sbjct: 304 FAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENE 363
Query: 386 KLNYFDTK-ESLRLMKVVLDI-----INNDTCSKQ-------------ETTLISSQ-LCA 425
LN + L L+I + +C++ +++ Q LC+
Sbjct: 364 LLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCS 423
Query: 426 TVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGITSYG-----------------RQCGHA 468
+ C+G+SGG + + + +G+ S+G +
Sbjct: 424 GTQ-EDESPCKGESGGAV--FLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVP 480
Query: 469 NTPAIYTRVSYYVPWI 484
+ + PW+
Sbjct: 481 PPRDFHINLFRMQPWL 496
Score = 63.1 bits (153), Expect = 9e-11
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 12/82 (14%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQY-------H 57
AAHC + V G K + + + ++ P +
Sbjct: 262 AAHCFRDGNDHSLWRVNVG-DPKSQWGKE---FLIEKAVISPGFDVFAKKNQGILEFYGD 317
Query: 58 DIALLKIAPPVEFSETLKPACL 79
DIALLK+A V+ S +P CL
Sbjct: 318 DIALLKLAQKVKMSTHARPICL 339
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 152 bits (386), Expect = 8e-40
Identities = 54/253 (21%), Positives = 96/253 (37%), Gaps = 59/253 (23%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
C G+++S +V+TAAHC T + V G + + HPNY
Sbjct: 485 SCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGG--------EKRDLEIEVVLFHPNYNI 536
Query: 340 EGTSQY-------HDIALLKIAPPVEFSETLKPACL------NRAHNVKSPTA-IASGFG 385
G + +D+AL+K+ +++ +T++P CL RA + T
Sbjct: 537 NGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEE 596
Query: 386 KLN------YFDTKESLRLMKVVLDIINNDTCS---------------KQETTLISSQ-L 423
L F ++E +L + + I N D K + +++ + L
Sbjct: 597 LLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFL 656
Query: 424 CA--TVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGITSYGRQCG----------HANTP 471
C +TC+GDSGGPL I+ + +G+ S+G A+
Sbjct: 657 CTGGVSPYADPNTCRGDSGGPL--IVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHAR 714
Query: 472 AIYTRVSYYVPWI 484
+ + +PW+
Sbjct: 715 DFHINLFQVLPWL 727
Score = 62.0 bits (150), Expect = 3e-10
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 16/82 (19%)
Query: 6 AAHCITSPLGKPRY-VRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQY-------H 57
AAHC T + V G + + HPNY G + +
Sbjct: 499 AAHCFTVDDKEHSIKVSVGG--------EKRDLEIEVVLFHPNYNINGKKEAGIPEFYDY 550
Query: 58 DIALLKIAPPVEFSETLKPACL 79
D+AL+K+ +++ +T++P CL
Sbjct: 551 DVALIKLKNKLKYGQTIRPICL 572
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_B 1hia_B
Length = 152
Score = 126 bits (320), Expect = 8e-35
Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 346 HDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESL--RLMKVVL 403
HD+ LL++ P + ++ +K L T ASG+G + + V L
Sbjct: 8 HDLMLLRLQSPAKITDAVKVLELPTQEPELGSTCEASGWGSIEPGPDDFEFPDEIQCVQL 67
Query: 404 DIINNDTCSKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGITSYG 462
++ N C+ ++ LCA + GGKDTC GDSGGPL +C GITS+G
Sbjct: 68 TLLQNTFCADAHPDKVTESMLCAGYLPGGKDTCMGDSGGPL------ICNGMWQGITSWG 121
Query: 463 R-QCGHANTPAIYTRVSYYVPWI 484
CG AN P+IYT++ +Y+ WI
Sbjct: 122 HTPCGSANKPSIYTKLIFYLDWI 144
Score = 37.5 bits (88), Expect = 0.003
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 57 HDIALLKIAPPVEFSETLKPACL 79
HD+ LL++ P + ++ +K L
Sbjct: 8 HDLMLLRLQSPAKITDAVKVLEL 30
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C*
1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C
1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Length = 97
Score = 99.1 bits (248), Expect = 2e-25
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 397 RLMKVVLDIINNDTCSKQETTLISSQ-LCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNI 455
RL + L +++N C K T I +CA A G +C GDSGGPL + + +
Sbjct: 6 RLQQASLPLLSNTNCKKYWGTKIKDAMICAG--ASGVSSCMGDSGGPL--VCKKNGAWTL 61
Query: 456 IGITSYGRQCGHANTPAIYTRVSYYVPWIVHTV 488
+GI S+G +TP +Y RV+ V W+ T+
Sbjct: 62 VGIVSWGSSTCSTSTPGVYARVTALVNWVQQTL 94
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B*
1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B
1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Length = 131
Score = 93.8 bits (234), Expect = 5e-23
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTE 340
FCGGSLI+ N+V+TAAHC + V G + S S ++ + + Y +
Sbjct: 26 FCGGSLINENWVVTAAHCGVTTS---DVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSL 82
Query: 341 GTSQYHDIALLKIAPPVEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNY 389
+ +DI LLK++ FS+T+ CL + + + + T + +G+G Y
Sbjct: 83 TIN--NDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRY 131
Score = 62.6 bits (153), Expect = 4e-12
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
AAHC + V G + S S ++ + + Y + + +DI LLK++
Sbjct: 40 AAHCGVTTS---DVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTIN--NDITLLKLS 94
Query: 66 PPVEFSETLKPACL-NRAHNVKSPTA-IASGFGKLNY 100
FS+T+ CL + + + + T + +G+G Y
Sbjct: 95 TAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRY 131
Score = 58.3 bits (142), Expect = 1e-10
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 11/56 (19%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKW--FCGGSLISPNYVMTAAHCITSP 245
I+ G A G +P Q +++D FCGGSLI+ N+V+TAAHC +
Sbjct: 1 IVNGEEAVPGSWPWQV---------SLQDKTGFHFCGGSLINENWVVTAAHCGVTT 47
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus
intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Length = 215
Score = 81.9 bits (202), Expect = 5e-18
Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 41/224 (18%)
Query: 266 VGFLEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNI 325
+ ++ GG+ C G+LI+PN ++T HC+ + + + + ++ S N
Sbjct: 22 IAYITFGGS------SCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNG 75
Query: 326 HRVMQNILHPNYTTEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFG 385
M P+ + +D A++K + T+ + + N+ T SG+
Sbjct: 76 SANMTEFYVPSGYINTGASQYDFAVIKTDTNI--GNTVGYRSIRQVTNLTGTTIKISGYP 133
Query: 386 KLNYFDTKESLRLMKVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQT 445
T + + + + DT G+SG
Sbjct: 134 GDKMRST--GKVSQWEMSGSVTREDT--------------NLAYYTIDTFSGNSGSA--- 174
Query: 446 IMPDLCMYN----IIGITSYGRQCGHANTPAIYTRVS-YYVPWI 484
M + I+G+ + G G N + + +V +I
Sbjct: 175 ------MLDQNQQIVGVHNAGYSNGTING---GPKATAAFVEFI 209
Score = 34.2 bits (78), Expect = 0.062
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
HC+ + + + + ++ S N M P+ + +D A++K
Sbjct: 45 NGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTD 104
Query: 66 PPVEFSETLKPACLNRAHNVKSPTAIASGFG 96
+ T+ + + N+ T SG+
Sbjct: 105 TNI--GNTVGYRSIRQVTNLTGTTIKISGYP 133
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_A 1hia_A
Length = 80
Score = 60.6 bits (148), Expect = 5e-12
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 192 IIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPL 246
IIGG + P Q + + CGG L++P +V+TAAHC
Sbjct: 1 IIGGRECEKNSHPWQV---AIYHYS-----SFQCGGVLVNPKWVLTAAHCKNDNY 47
Score = 56.7 bits (138), Expect = 1e-10
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 281 FCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNY 337
CGG L++P +V+TAAHC V G T V + HP +
Sbjct: 25 QCGGVLVNPKWVLTAAHCKNDNY----EVWLGRHNLFENENTAQFFGVTADFPHPGF 77
Score = 25.9 bits (58), Expect = 8.1
Identities = 10/43 (23%), Positives = 12/43 (27%), Gaps = 4/43 (9%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNY 48
AAHC V G T V + HP +
Sbjct: 39 AAHCKNDNY----EVWLGRHNLFENENTAQFFGVTADFPHPGF 77
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A
{Nesterenkonia abyssinica}
Length = 218
Score = 57.8 bits (139), Expect = 9e-10
Identities = 25/187 (13%), Positives = 51/187 (27%), Gaps = 23/187 (12%)
Query: 281 FCGGSLI---SPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNY 337
C +++ + + V TA HC+ G F Y +++ + ++
Sbjct: 22 VCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVTSAE 81
Query: 338 TTEGTSQYHDIALLKIAPPV--EFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKES 395
HD A + + + A + + A G+ F+
Sbjct: 82 WANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQPRGQYYSAYGYPAAAPFNG--- 138
Query: 396 LRLMKVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNI 455
T + + ++ + G SGGP + +
Sbjct: 139 -------------QELHSCHGTATNDPMGSSTQGIPCNMTGGSSGGPW--FLGNGTGGAQ 183
Query: 456 IGITSYG 462
SYG
Sbjct: 184 NSTNSYG 190
Score = 30.1 bits (67), Expect = 1.5
Identities = 9/62 (14%), Positives = 17/62 (27%)
Query: 6 AAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIA 65
A HC+ G F Y +++ + ++ HD A +
Sbjct: 39 AGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVTSAEWANRGDFEHDYAFAVLE 98
Query: 66 PP 67
Sbjct: 99 TK 100
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 47.4 bits (112), Expect = 1e-05
Identities = 84/482 (17%), Positives = 136/482 (28%), Gaps = 162/482 (33%)
Query: 34 DNIHRVMQNILHPNYTTEGTSQ-----YHDIALLKIAPPVEFSETLKPACLNRAHNVKSP 88
++IH + +L N TT ++ Y A + P F + A L RA V
Sbjct: 99 NDIHALAAKLLQENDTTLVKTKELIKNYIT-ARIMAKRP--FDKKSNSA-LFRA--VGEG 152
Query: 89 TA-IASGFG----KLNYFE------CTQYSKIQDESPIALAPALVGGVR--------YVK 129
A + + FG +YFE T Y + + A L +R + +
Sbjct: 153 NAQLVAIFGGQGNTDDYFEELRDLYQT-YHVLVGDLIKFSAETLSELIRTTLDAEKVFTQ 211
Query: 130 TQCDILA--------------------MPMIIGGSRAKYGEFPHQCTQY---SKIQDESP 166
+IL P+I Q Y +K+ +P
Sbjct: 212 G-LNILEWLENPSNTPDKDYLLSIPISCPLI----------GVIQLAHYVVTAKLLGFTP 260
Query: 167 IALAPALVGGVRYVRTQCDILAMPMIIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKW--F 224
L L G + + ++ I + E F K + F
Sbjct: 261 GELRSYLKGATGHSQ---GLVTAVAI---AETDSWE-------SFFVS--VRKAITVLFF 305
Query: 225 CG--GSLISPNYVMTAAHCITSPLVGTMVKAPLRTLLFISMAEVGFLEEGGTMKDVKWFC 282
G PN + + S V +P M + T + V+
Sbjct: 306 IGVRCYEAYPNTSLPPSILEDSLENNEGVPSP--------MLSI----SNLTQEQVQ--- 350
Query: 283 GGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNIL--HPNYTTE 340
++ T +H L + V L+ N + ++ P
Sbjct: 351 --DYVN----KTNSH-----LPAGKQVEISLV---------NGAK--NLVVSGPP----- 383
Query: 341 GTSQYH-DIALLKI-APP------VEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDT 392
S Y ++ L K AP + FSE K NR V SP F +
Sbjct: 384 -QSLYGLNLTLRKAKAPSGLDQSRIPFSER-KLKFSNRFLPVASP------------FHS 429
Query: 393 KESLRLMKVVLDIINNDTCSKQETTLISSQLCATVMA--GGKDTCQGDSGGPLQTIMPDL 450
L+ D+IN D K + + + V G D +I +
Sbjct: 430 H----LLVPASDLINKD-LVKNNVSFNAKDIQIPVYDTFDGSDLRVLSG-----SISERI 479
Query: 451 CM 452
Sbjct: 480 VD 481
Score = 40.8 bits (95), Expect = 0.001
Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 59/215 (27%)
Query: 323 DNIHRVMQNILHPNYTTEGTSQ-----YHDIALLKIAPPVEFSETLKPACLNRAHNVKSP 377
++IH + +L N TT ++ Y A + P F + A L RA V
Sbjct: 99 NDIHALAAKLLQENDTTLVKTKELIKNYIT-ARIMAKRP--FDKKSNSA-LFRA--VGEG 152
Query: 378 TA-IASGFG----KLNYFDTKESLRLM-----KVVLDIINNDTCSKQETTLISSQLCATV 427
A + + FG +YF+ E LR + +V D+I ++ + LI + L A
Sbjct: 153 NAQLVAIFGGQGNTDDYFE--E-LRDLYQTYHVLVGDLI--KFSAETLSELIRTTLDAEK 207
Query: 428 MAG-GKDTCQ---GDSGGP----LQTI---MPDLCMYNIIGITSYGRQCGHANTPAIYTR 476
+ G + + S P L +I P +IG+ Q H
Sbjct: 208 VFTQGLNILEWLENPSNTPDKDYLLSIPISCP------LIGVI----QLAH--------- 248
Query: 477 VSYYVPWIVHTVWPDQFPNSSLTTALAYRADQLKA 511
Y V + P + S L A + + A
Sbjct: 249 --YVVTAKLLGFTPGEL-RSYLKGATGHSQGLVTA 280
Score = 36.6 bits (84), Expect = 0.027
Identities = 25/141 (17%), Positives = 34/141 (24%), Gaps = 50/141 (35%)
Query: 195 GSRAK------YGEFPHQAEV------------GF-----VEEGGTMKDVKWFCG--GSL 229
GS+ + Y +V GF V + F G G
Sbjct: 1625 GSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIH-FGGEKGKR 1683
Query: 230 ISPNY-VMTAAHC-------------ITSPLVGTMVKAP---L-RT------LLFISMAE 265
I NY M I ++ L T L + A
Sbjct: 1684 IRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAA 1743
Query: 266 VGFLEEGGTMKDVKWFCGGSL 286
L+ G + F G SL
Sbjct: 1744 FEDLKSKGLIPADATFAGHSL 1764
Score = 29.2 bits (65), Expect = 4.6
Identities = 27/170 (15%), Positives = 47/170 (27%), Gaps = 72/170 (42%)
Query: 402 VLDIINNDTCSKQETTLISSQLCATVMAGGKD-----------TCQGDSGGPLQT--IMP 448
+LDI+ N+ + T+ GG+ + G L+T I
Sbjct: 1661 ILDIVINNPVNL------------TIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFK 1708
Query: 449 DL------CMYN----IIGITSYGRQCGHANT-PAIYTRVSYYVPWIVHTVWPDQF---P 494
++ + ++ T T PA+ + +
Sbjct: 1709 EINEHSTSYTFRSEKGLLSAT--------QFTQPALTL-MEK----AAFEDLKSKGLIPA 1755
Query: 495 NS-----SLT--TALAYRADQLKAE------RAR-------VEKDSFLTS 524
++ SL ALA AD + E R V +D S
Sbjct: 1756 DATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRS 1805
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme,
hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1
PDB: 1qy6_A
Length = 274
Score = 44.4 bits (104), Expect = 4e-05
Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 10/93 (10%)
Query: 266 VGFLEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNI 325
V +++ + G ++ + ++T H + + G P ++ + +
Sbjct: 22 VTYIQ--VEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGG 79
Query: 326 HRVMQNILHPNYTTEGTSQYHDIALLKIAPPVE 358
Q S D+A++K +P +
Sbjct: 80 FTAEQIT--------KYSGEGDLAIVKFSPNEQ 104
Score = 42.9 bits (100), Expect = 1e-04
Identities = 4/43 (9%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Query: 202 EFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITS 244
+ V +++ + G ++ + ++T H + +
Sbjct: 16 NGHYAP-VTYIQ--VEAPTGTFIASGVVVGKDTLLTNKHVVDA 55
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A
{Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Length = 268
Score = 44.3 bits (103), Expect = 5e-05
Identities = 38/230 (16%), Positives = 61/230 (26%), Gaps = 38/230 (16%)
Query: 266 VGFLEEGGTMKDVKWFCGGSLISP------NYVMTAAHCITSPLGKPRYVRFGLI----- 314
VG + GT C GSL++ Y +TA HC +
Sbjct: 25 VGAYSKSGT-----LACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNST 79
Query: 315 -TKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIAPPVEFSETLKPACLNRAHN 373
+ + + T + T D LL++ + L A +R
Sbjct: 80 CRAPNTPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAANPAFNLFWAGWDRRDQ 139
Query: 374 V-KSPTAIASGFGKLNYFDTKESLRLMKVVLDIINNDTCSKQETTLISSQLCATVMAGGK 432
AI K + + + + ++ L G
Sbjct: 140 NYPGAIAIHHPNVAE------------KRISNSTSPTSFVAWGGGAGTTHLNVQWQPSGG 187
Query: 433 DTCQGDSGGPLQTIMPDLCMYNIIGITSYGR-QCG--HANTPAIYTRVSY 479
T G SG P+ + ++G G C N Y RV
Sbjct: 188 VTEPGSSGSPIYSP-----EKRVLGQLHGGPSSCSATGTNRSDQYGRVFT 232
Score = 28.5 bits (62), Expect = 4.8
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 11/42 (26%)
Query: 209 VGFVEEGGTMKDVKWFCGGSLISP------NYVMTAAHCITS 244
VG + GT C GSL++ Y +TA HC
Sbjct: 25 VGAYSKSGT-----LACTGSLVNNTANDRKMYFLTAHHCGMG 61
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A
{Staphylococcus aureus} SCOP: b.47.1.1
Length = 268
Score = 42.7 bits (100), Expect = 1e-04
Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 36/170 (21%)
Query: 280 WFCGGSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTT 339
+ G ++ + ++T H + + G P ++ + + Q
Sbjct: 34 FIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQIT------- 86
Query: 340 EGTSQYHDIALLKIAPPVE---FSETLKPACLNRAHNVKS-PTAIASG--FGKLNYFDTK 393
S D+A++K +P + E +KPA ++ + +G K
Sbjct: 87 -KYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDK------- 138
Query: 394 ESLRLMKVVLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPL 443
+ M + + + + L T G+SG P+
Sbjct: 139 -PVATM-----WESKGKITYLKGEAMQYDL---------STTGGNSGSPV 173
Score = 38.1 bits (88), Expect = 0.004
Identities = 4/44 (9%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Query: 202 EFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCITSP 245
+ V +++ + G ++ + ++T H + +
Sbjct: 16 NGHYAP-VTYIQ--VEAPTGTFIASGVVVGKDTLLTNKHVVDAT 56
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase;
2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Length = 246
Score = 41.5 bits (97), Expect = 3e-04
Identities = 26/190 (13%), Positives = 53/190 (27%), Gaps = 48/190 (25%)
Query: 284 GSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTS 343
G LI N ++T H P + F + + +
Sbjct: 52 GVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQ 111
Query: 344 QYHDIALLKIAPPVE---FSETLKPACLNRAHNVKSP-TAIASG--FGKLNYFDTKESLR 397
D+A++K+ P + + ++PA + ++ G + + SL
Sbjct: 112 GL-DLAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNY-----SAYSLY 165
Query: 398 LMKV-VLDIINNDTCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYN-- 454
++ + + T G+SG + +N
Sbjct: 166 QSQIEMFNDSQYFG----------------------YTEVGNSGSGI---------FNLK 194
Query: 455 --IIGITSYG 462
+IGI S
Sbjct: 195 GELIGIHSGK 204
Score = 30.3 bits (68), Expect = 1.2
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 227 GSLISPNYVMTAAHCI 242
G LI N ++T H
Sbjct: 52 GVLIGKNTIVTNYHVA 67
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 41.0 bits (95), Expect = 9e-04
Identities = 66/430 (15%), Positives = 109/430 (25%), Gaps = 136/430 (31%)
Query: 8 HCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIAPP 67
H I S +R L L + + + ++ +L NY S
Sbjct: 53 HIIMSKDAVSGTLR--LFWTLLSKQEEMVQKFVEEVLRINYKFL-MSPIKTEQRQPSMMT 109
Query: 68 VEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFECTQYSKIQDESPIALAPA---LVGG 124
+ E +R +N F K N Y K++ ++ + L PA L+ G
Sbjct: 110 RMYIE-----QRDRLYNDNQV------FAKYNVSRLQPYLKLR-QALLELRPAKNVLIDG 157
Query: 125 VRYVKTQCDILAMPMIIGGSRAKYGEFPHQCTQYSKIQDESPIALAPALVGGVRYVR-TQ 183
+ GS G+ + ++
Sbjct: 158 --------------V--LGS----GK---TWVALDVCLSYKVQCKMD---FKIFWLNLKN 191
Query: 184 CDILAMPMIIGGSRAKYGEFPHQAEVGFVEEGGTMKDVKWFCGGSLISPNYVMTAAHCIT 243
C+ ++ ++ I PN+ + H
Sbjct: 192 CN---------------------------SPETVLEMLQKLL--YQIDPNWTSRSDHSSN 222
Query: 244 SPLVGTMVKAPLRTLLFISMAEVGFLEEGGTMKDVKWFCGGSLISPNYVMTA--AHCITS 301
L ++A LR LL E L + +V + A C
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCLL----VLLNV-Q-------NAK-AWNAFNLSCKI- 268
Query: 302 PLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIALLKIAPPVEFSE 361
L+T VTD L TT I+L + + E
Sbjct: 269 -----------LLTTRFKQVTD--------FLSAATTTH-------ISLDHHSMTLTPDE 302
Query: 362 TL---------KPACL-NRAHNVKSPTAIASGFGKLNYFDTKESLRLMKVVLDIINNDTC 411
+P L +P + S ES+R D + C
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTT-NPRRL-SIIA--------ESIRDGLATWDNWKHVNC 352
Query: 412 SKQETTLISS 421
K T + SS
Sbjct: 353 DKLTTIIESS 362
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Length = 204
Score = 34.0 bits (78), Expect = 0.064
Identities = 6/73 (8%), Positives = 23/73 (31%), Gaps = 12/73 (16%)
Query: 284 GSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTS 343
G ++ N ++T H + + + +I +++
Sbjct: 26 GFVVGKNTILTNKHVSKNY-KVGDRITAHPNSDKGNGGIYSIKKII-----------NYP 73
Query: 344 QYHDIALLKIAPP 356
D++++++
Sbjct: 74 GKEDVSVIQVEER 86
Score = 30.2 bits (68), Expect = 1.2
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 227 GSLISPNYVMTAAHCITSPLVGTMVKA 253
G ++ N ++T H + VG + A
Sbjct: 26 GFVVGKNTILTNKHVSKNYKVGDRITA 52
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase;
2.40A {Sesbania mosaic virus}
Length = 191
Score = 32.1 bits (72), Expect = 0.25
Identities = 21/180 (11%), Positives = 44/180 (24%), Gaps = 45/180 (25%)
Query: 290 NYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTSQYHDIA 349
+ ++TA H + + + G + + + + D A
Sbjct: 40 DCLLTAHHVWCNSMRPTGLAKAGKQVSVEDW---------------EISMSSSDKMLDFA 84
Query: 350 LLKIAPPVEFSETLKPACLNRAHNVKSPTAIASGFGKLNYFDTKESLRLMKVVLDIINND 409
++++ V +K L + K G S + + +
Sbjct: 85 IVRVPTHVWSKLGVKSTPLVCPSS-KDVITCYGGSSSDCLMSGVGSSSTSEFTWKLTHTC 143
Query: 410 TCSKQETTLISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGITSYGRQCGHAN 469
T G SG PL ++G+ + G N
Sbjct: 144 -----------------------PTAAGWSGTPL------YSSRGVVGMHVGFEEIGKLN 174
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A
{Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A
1exf_A 1due_A
Length = 242
Score = 30.2 bits (68), Expect = 1.2
Identities = 19/86 (22%), Positives = 28/86 (32%), Gaps = 5/86 (5%)
Query: 284 GSLISPNYVMTAAHCITSPLGKPRYVRFGLITKLSYSVTDNIHRVMQNILHPNYTTEGTS 343
G LI N V+T H G P V F + + E
Sbjct: 59 GVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEV--KEILQEPFG 116
Query: 344 QYHDIALLKIAPP---VEFSETLKPA 366
D+AL+++ P V + + PA
Sbjct: 117 AGVDLALIRLKPDQNGVSLGDKISPA 142
>2zrr_A Mundticin KS immunity protein; antiparallel four-helix bundle,
antimicrobial protein; 1.80A {Enterococcus mundtii}
Length = 118
Score = 28.7 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 205 HQAEVGFVEEGGTMKDVKWFCGGS 228
H G V G M ++KWF GG
Sbjct: 8 HHHSSGLVPRGSHMSNLKWFSGGD 31
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels,
thermophIle, kinetic stabilit thermostability, protein
folding; HET: 2AB; 1.44A {Thermobifida fusca}
Length = 186
Score = 28.3 bits (63), Expect = 4.2
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 11/60 (18%)
Query: 419 ISSQLCATVMAGGKDTCQGDSGGPLQTIMPDLCMYNIIGITSYGRQCGHANTPAIYTRVS 478
++ T A G GDSGGP L G+TS G + + ++
Sbjct: 125 VTGLTRTTACAEG-----GDSGGPW------LTGSQAQGVTSGGTGDCRSGGITFFQPIN 173
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein,
structural genomics, NPPSFA; 1.78A {Thermus
thermophilus} PDB: 3v45_A
Length = 159
Score = 27.5 bits (62), Expect = 8.2
Identities = 7/35 (20%), Positives = 13/35 (37%), Gaps = 5/35 (14%)
Query: 483 WIVHTVWPDQFPNSSLTTALAYR-----ADQLKAE 512
+++H P S T A + A +L +
Sbjct: 72 YVIHAAVLGDEPASLETVRKATKSALEKAVELGLK 106
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.135 0.416
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,825,534
Number of extensions: 459998
Number of successful extensions: 1752
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1086
Number of HSP's successfully gapped: 313
Length of query: 525
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 427
Effective length of database: 3,965,535
Effective search space: 1693283445
Effective search space used: 1693283445
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (26.8 bits)