Query psy3172
Match_columns 157
No_of_seqs 172 out of 1785
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 18:12:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ffu_A Ppgalnact-2, polypeptid 100.0 1.7E-32 5.7E-37 228.7 15.4 154 4-157 3-156 (501)
2 2d7i_A Polypeptide N-acetylgal 100.0 1.4E-28 5E-33 208.3 14.9 147 9-157 56-206 (570)
3 1xhb_A Polypeptide N-acetylgal 99.9 6.4E-26 2.2E-30 187.4 15.4 119 39-157 1-124 (472)
4 3bcv_A Putative glycosyltransf 99.9 1.1E-22 3.6E-27 153.1 11.9 89 65-157 3-94 (240)
5 1qg8_A Protein (spore coat pol 99.9 1.1E-21 3.8E-26 148.9 11.0 88 67-157 1-98 (255)
6 3ckj_A Putative uncharacterize 99.8 4.1E-19 1.4E-23 140.9 11.0 90 65-157 46-141 (329)
7 2z86_A Chondroitin synthase; G 99.8 6.5E-19 2.2E-23 149.8 12.5 90 64-157 372-464 (625)
8 3l7i_A Teichoic acid biosynthe 99.8 1.9E-20 6.4E-25 162.4 0.0 89 66-157 1-93 (729)
9 3f1y_A Mannosyl-3-phosphoglyce 99.8 1.8E-18 6.2E-23 140.5 8.6 89 66-157 93-189 (387)
10 2z86_A Chondroitin synthase; G 99.7 1.6E-17 5.5E-22 141.2 9.7 90 65-157 91-184 (625)
11 4hg6_A Cellulose synthase subu 99.7 1.2E-16 4.2E-21 140.0 10.7 95 63-157 136-248 (802)
12 4fix_A UDP-galactofuranosyl tr 99.7 4.8E-17 1.7E-21 139.9 7.9 88 66-157 179-278 (657)
13 2wvl_A Mannosyl-3-phosphoglyce 99.6 2E-15 7E-20 120.2 9.7 85 66-157 52-169 (391)
14 2fy7_A Beta-1,4-galactosyltran 99.6 1.5E-14 5.1E-19 113.2 10.3 70 65-157 63-139 (287)
15 2bo4_A Mannosylglycerate synth 99.5 8.1E-14 2.8E-18 113.5 9.6 84 70-157 2-102 (397)
16 2nxv_A ATP synthase subunits r 99.4 1.2E-13 4.1E-18 105.4 6.4 69 66-157 15-84 (249)
17 2zu9_A Mannosyl-3-phosphoglyce 99.4 8.4E-13 2.9E-17 106.9 10.6 85 67-157 51-170 (394)
18 1fo8_A Alpha-1,3-mannosyl-glyc 98.7 4E-08 1.4E-12 78.5 8.7 88 67-157 2-109 (343)
19 3lw6_A FI08434P, beta-4-galact 96.4 0.028 9.7E-07 43.4 9.9 68 67-157 51-123 (287)
20 2d0j_A Galactosylgalactosylxyl 94.6 0.21 7.2E-06 37.7 8.5 87 66-157 2-110 (246)
21 1v84_A Galactosylgalactosylxyl 94.4 0.16 5.6E-06 38.5 7.4 88 66-157 2-116 (253)
22 3cu0_A Galactosylgalactosylxyl 93.7 0.63 2.1E-05 35.8 9.6 80 64-147 18-115 (281)
23 2e8b_A Probable molybdopterin- 82.4 8.6 0.00029 27.1 8.3 50 101-157 56-106 (201)
24 1omz_A Alpha-1,4-N-acetylhexos 79.2 4.3 0.00015 31.3 5.9 86 66-157 27-116 (293)
25 4ecm_A Glucose-1-phosphate thy 79.2 13 0.00045 27.4 8.6 72 82-157 57-132 (269)
26 2c0n_A A197; thermophil protei 77.5 7.4 0.00025 28.4 6.4 23 135-157 37-63 (203)
27 2ux8_A Glucose-1-phosphate uri 75.3 21 0.00073 26.6 8.9 71 82-157 47-141 (297)
28 1e5k_A Molybdopterin-guanine d 74.5 17 0.00058 25.6 7.8 66 81-157 34-101 (201)
29 2wee_A MOBA-related protein; u 74.2 11 0.00038 25.9 6.7 71 81-157 32-105 (197)
30 2waw_A MOBA relate protein; un 73.8 11 0.00038 26.0 6.5 71 81-157 32-105 (199)
31 1fxo_A Glucose-1-phosphate thy 69.6 13 0.00043 28.1 6.4 80 72-157 27-110 (293)
32 2v0h_A Bifunctional protein GL 69.5 24 0.00082 27.9 8.3 70 82-157 35-105 (456)
33 1ezi_A CMP-N-acetylneuraminic 69.2 28 0.00095 24.7 8.1 69 82-157 31-106 (228)
34 2xwl_A 2-C-methyl-D-erythritol 68.8 25 0.00085 24.7 7.6 71 81-157 31-102 (223)
35 2e3d_A UTP--glucose-1-phosphat 68.7 28 0.00095 26.0 8.2 72 81-157 40-137 (302)
36 4fce_A Bifunctional protein GL 67.8 15 0.0005 29.2 6.7 70 82-157 38-108 (459)
37 2y6p_A 3-deoxy-manno-octuloson 67.0 24 0.00082 25.0 7.3 65 82-157 29-95 (234)
38 1hm9_A GLMU, UDP-N-acetylgluco 65.5 19 0.00064 28.7 6.9 69 82-157 41-111 (468)
39 3juk_A UDP-glucose pyrophospho 65.1 28 0.00095 25.7 7.5 78 73-157 28-130 (281)
40 3q80_A 2-C-methyl-D-erythritol 63.8 35 0.0012 24.8 7.7 73 77-157 33-109 (231)
41 2dpw_A Hypothetical protein TT 63.8 18 0.00063 25.9 6.1 60 82-157 34-93 (232)
42 2qh5_A PMI, ALGA, mannose-6-ph 61.8 34 0.0012 25.8 7.5 79 73-157 31-113 (308)
43 3tzt_A Glycosyl transferase fa 58.9 54 0.0018 24.5 9.8 89 67-157 4-110 (276)
44 3f1c_A Putative 2-C-methyl-D-e 58.8 34 0.0012 24.8 6.8 72 81-157 33-114 (246)
45 1mc3_A Glucose-1-phosphate thy 58.1 25 0.00084 26.6 6.1 79 72-157 28-111 (296)
46 1lvw_A Glucose-1-phosphate thy 57.5 25 0.00084 26.6 6.0 79 72-157 28-111 (295)
47 3ngw_A Molybdopterin-guanine d 57.4 36 0.0012 24.2 6.6 68 77-157 24-92 (208)
48 3d5n_A Q97W15_sulso; NESG, SSR 57.2 14 0.00049 25.8 4.4 34 123-157 61-96 (197)
49 3st8_A Bifunctional protein GL 57.1 67 0.0023 25.9 9.0 78 72-156 34-119 (501)
50 1vgw_A 4-diphosphocytidyl-2C-m 54.8 52 0.0018 23.1 9.2 70 81-157 35-113 (231)
51 1g9r_A Glycosyl transferase; a 54.0 56 0.0019 24.7 7.6 74 82-157 14-105 (311)
52 1qwj_A Cytidine monophospho-N- 53.0 58 0.002 23.1 9.5 69 82-157 30-104 (229)
53 1ll2_A Glycogenin-1; protein-s 51.4 59 0.002 25.0 7.4 14 144-157 91-104 (333)
54 1h7e_A 3-deoxy-manno-octuloson 49.1 68 0.0023 22.7 9.5 68 82-157 29-98 (245)
55 1w55_A ISPD/ISPF bifunctional 48.6 35 0.0012 26.9 5.7 66 82-157 33-98 (371)
56 2xme_A CTP-inositol-1-phosphat 47.8 47 0.0016 23.5 6.0 68 82-157 47-117 (232)
57 1i52_A 4-diphosphocytidyl-2-C- 46.1 76 0.0026 22.4 8.3 69 82-157 37-108 (236)
58 2x65_A Mannose-1-phosphate gua 45.5 29 0.00099 26.8 4.7 81 73-157 28-109 (336)
59 3tqd_A 3-deoxy-manno-octuloson 36.8 1.2E+02 0.0042 22.2 10.2 67 82-157 36-107 (256)
60 4fcu_A 3-deoxy-manno-octuloson 36.6 1.2E+02 0.0042 22.1 8.4 67 82-157 28-100 (253)
61 2i5e_A Hypothetical protein MM 35.7 1.1E+02 0.0038 21.3 8.4 33 122-157 65-97 (211)
62 3pnn_A Conserved domain protei 31.8 1.3E+02 0.0043 22.5 6.4 71 82-157 35-124 (303)
63 3u2u_A Glycogenin-1, GN-1, GN1 31.3 77 0.0026 23.6 5.0 11 147-157 95-105 (263)
64 2pa4_A UTP-glucose-1-phosphate 30.0 1E+02 0.0034 23.3 5.5 71 82-157 45-142 (323)
65 3k8d_A 3-deoxy-manno-octuloson 29.9 1.7E+02 0.0057 21.6 9.9 67 82-157 45-116 (264)
66 1xkn_A Putative peptidyl-argin 29.5 75 0.0026 25.0 4.8 32 70-106 295-326 (355)
67 2px7_A 2-C-methyl-D-erythritol 29.1 1.5E+02 0.0053 20.9 6.7 62 82-157 54-115 (236)
68 1s4n_A Glycolipid 2-alpha-mann 28.9 2.1E+02 0.0072 22.5 7.4 63 66-128 26-90 (348)
69 3rsb_A Adenosylcobinamide-phos 28.1 17 0.00059 25.1 0.8 69 82-157 29-101 (196)
70 2vsh_A TARI, 2-C-methyl-D-eryt 28.1 1.5E+02 0.0052 20.5 7.2 72 81-157 32-115 (236)
71 1vpa_A 2-C-methyl-D-erythritol 28.0 1.2E+02 0.004 21.3 5.4 71 82-157 43-116 (234)
72 2yc3_A 2-C-methyl-D-erythritol 24.4 1.8E+02 0.0061 20.1 7.2 70 82-157 34-107 (228)
73 1zbr_A AAQ65385, conserved hyp 23.4 69 0.0024 25.1 3.5 32 70-106 286-317 (349)
74 3oam_A 3-deoxy-manno-octuloson 22.6 2.2E+02 0.0074 20.4 9.7 67 82-157 29-100 (252)
75 2jer_A Agmatine deiminase; hyd 20.5 1.3E+02 0.0044 24.0 4.6 32 70-106 313-344 (389)
76 3h7c_X Agmatine deiminase; str 20.3 1.1E+02 0.0037 24.4 4.1 34 69-106 319-352 (383)
No 1
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=100.00 E-value=1.7e-32 Score=228.74 Aligned_cols=154 Identities=62% Similarity=0.959 Sum_probs=143.4
Q ss_pred CCCCccccCCcccccccccCCCCCCcccccccchhhhccCCCCCCCCCCCCCccccccCCCCCCcEEEEEEecCCchHHH
Q psy3172 4 DNHVDVRYFDESAYLEKGALRPGQDPYESNKYNQAASDNTPSNRDVPDTRHPACTRHALPRDLPATSVIITFHNEARSAL 83 (157)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~p~vSiIIp~yn~~~~~l 83 (157)
++-+.|..|+++.++.....+..+++|++++||.++|+.+++.|.+|+.|+..|....++..+|+||||||+||++...|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~s~~i~~~r~~~d~r~~~~~~~~~~~~~p~vSVIIp~yN~~~~~L 82 (501)
T 2ffu_A 3 ALKVRWPDFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSAL 82 (501)
T ss_dssp --CBCGGGSCHHHHHHTTCCCTTSCTTTTTSSCHHHHHHSCTTCCCCCCSCGGGGGCCCCSSCCCEEEEEEESSCCHHHH
T ss_pred cccCCHhhCCcccccChhhhhhhhhhHHhcCcCHHHHcccCCCCcCCCCChhHhccccCCcCCCCEEEEEEeCcCcHHHH
Confidence 45688999999999999999999999999999999999999999999999999998888888999999999999984499
Q ss_pred HHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 84 LRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 84 ~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
.+||.|+++|+++++..|||||||||+|+++...++..+++++++.++|.|++.|+|.|++.|+|+||+|||+|
T Consensus 83 ~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v~vi~~~~n~G~~~A~N~G~~~A~gd~i~flD~D 156 (501)
T 2ffu_A 83 LRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSH 156 (501)
T ss_dssp HHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGBTTEEEEECSSCCHHHHHHHHHHHHCCSSEEEECCSS
T ss_pred HHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcCCCEEEEECCCCcCHHHHHHHHHHhcCCCEEEEECCC
Confidence 99999999999876445999999999999977777788999999999999999999999999999999999998
No 2
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.96 E-value=1.4e-28 Score=208.33 Aligned_cols=147 Identities=43% Similarity=0.664 Sum_probs=128.4
Q ss_pred cccCCcccccccccCCCCCCcccccccchhhhccCCCCCCCCCCCCCccccccCCCCCCcEEEEEEecCCchHHHHHHHH
Q psy3172 9 VRYFDESAYLEKGALRPGQDPYESNKYNQAASDNTPSNRDVPDTRHPACTRHALPRDLPATSVIITFHNEARSALLRSVV 88 (157)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~p~vSiIIp~yn~~~~~l~~~l~ 88 (157)
.|.++....+... ++.++.|++++||.++|+++++.|.+|+.++..|....++..+|+||||||+||++...|.+||+
T Consensus 56 ~g~~g~~~~~~~~--~~~~~~~~~~~~n~~~sd~i~l~R~~~d~r~~~~~~~~~~~~~P~vSVIIp~yNe~~~~L~~~L~ 133 (570)
T 2d7i_A 56 NGEQGRPYPMTDA--ERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSIIIPFHNEGWSSLLRTVH 133 (570)
T ss_dssp TTGGGCCCCCCTT--TTSSHHHHTTSSCHHHHHTSCTTCCCCCCSCGGGGTCCEESSCCCEEEEEEESSCCHHHHHHHHH
T ss_pred CCCCCCceECCHH--HHHHHHHHHcCCCHHHHhccCCCccCCCCCCccceecccCCCCCCeEEEEEECCCCHHHHHHHHH
Confidence 3666666666533 44688999999999999999999999999999999888888899999999999998349999999
Q ss_pred HHHhhCCCCCccEEEEEeCCCCCchH----HHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 89 SIINRTPAHLLKEIILVDDFSDDPSD----GEELERIEKVSVLRNDKREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 89 sl~~q~~~~~~~eIivvddgS~d~t~----~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
|+++|+++++..|||||||||+|+++ +...+..+++++++.++|.|++.|+|.|++.|+|+||+|||+|
T Consensus 134 Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~~~A~N~G~~~A~gd~i~fLD~D 206 (570)
T 2d7i_A 134 SVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTRMLGASVATGDVITFLDSH 206 (570)
T ss_dssp HHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCHHHHHHHHHHHCCSSEEEECCSS
T ss_pred HHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCHHHHHHHHHHhcCCCEEEEEcCC
Confidence 99999987655599999999999983 2334467899999999999999999999999999999999998
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.94 E-value=6.4e-26 Score=187.42 Aligned_cols=119 Identities=46% Similarity=0.774 Sum_probs=101.2
Q ss_pred hhccCCCCCCCCCCCCCccccccCCCCCCcEEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCc-h---H
Q psy3172 39 ASDNTPSNRDVPDTRHPACTRHALPRDLPATSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDP-S---D 114 (157)
Q Consensus 39 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~-t---~ 114 (157)
+|+++++.|++|+.|+..|....++..+|+||||||+||++.+.|.+||+|+++|++++...|||||||||+|+ + +
T Consensus 1 ~s~~~~~~r~~~d~r~~~c~~~~~~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l 80 (472)
T 1xhb_A 1 ASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPL 80 (472)
T ss_dssp -------CCCCCCCSCGGGGTCCCCSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHH
T ss_pred CCccccCCCCCCCCCChhhccCcCCcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHH
Confidence 58999999999999999999999998999999999999998349999999999999887445999999999995 5 2
Q ss_pred HHHHhcCC-CEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 115 GEELERIE-KVSVLRNDKREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 115 ~~~~~~~~-~v~vi~~~~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
++..+.++ ++++++.++|.|++.|+|.|++.|+|+||+|||+|
T Consensus 81 ~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~~A~gd~i~flD~D 124 (472)
T 1xhb_A 81 ESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAH 124 (472)
T ss_dssp HHHHHSSSSCEEEEECSSCCCHHHHHHHHHHHCCSSEEEEEESS
T ss_pred HHHHHHCCCcEEEEECCCCCChHHHHHHHHHhccCCeEEEECCC
Confidence 33445677 89999999999999999999999999999999998
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.89 E-value=1.1e-22 Score=153.09 Aligned_cols=89 Identities=30% Similarity=0.400 Sum_probs=79.9
Q ss_pred CCCcEEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHH---HHHhcCCCEEEEEcCCCCCHHHHHHH
Q psy3172 65 DLPATSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDG---EELERIEKVSVLRNDKREGLMRSRVK 141 (157)
Q Consensus 65 ~~p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~---~~~~~~~~v~vi~~~~n~G~~~a~n~ 141 (157)
.+|+||||||+||++ .+|.+||+|+++|+++++ |||||||||+|++.+ ...+.++++++++ .+|.|.+.|+|.
T Consensus 3 ~~p~vsViIp~yn~~-~~l~~~l~Sl~~q~~~~~--eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~-~~n~G~~~a~N~ 78 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVE-KYLDQCVQALLAQTLSDI--EIILIDDESPDNCPKICDDYAAQYPNIKVIH-KKNAGLGMACNS 78 (240)
T ss_dssp CCCSEEEEEEESSCT-TTHHHHHHHHHTCSSSSE--EEEEEECCCSSSHHHHHHHHHHHCSSEEEEE-CCCCCHHHHHHH
T ss_pred CCCcEEEEEecCCCH-HHHHHHHHHHHhCcCCCe--EEEEEECCCCcCHHHHHHHHHhhCCCEEEEE-CCCCChHHHHHH
Confidence 468999999999999 599999999999999888 999999999999843 3334678999997 479999999999
Q ss_pred HHHHcCCCEEEEEcCC
Q psy3172 142 GADAATAPVLTFLDSH 157 (157)
Q Consensus 142 g~~~a~gd~i~flDa~ 157 (157)
|++.|+|+||+|||+|
T Consensus 79 g~~~a~g~~i~~lD~D 94 (240)
T 3bcv_A 79 GLDVATGEYVAFCDSD 94 (240)
T ss_dssp HHHHCCSSEEEECCTT
T ss_pred HHHHcCCCEEEEECCC
Confidence 9999999999999998
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.86 E-value=1.1e-21 Score=148.91 Aligned_cols=88 Identities=20% Similarity=0.295 Sum_probs=79.5
Q ss_pred CcEEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHh--cCCCEEEEEcC--------CCCCHH
Q psy3172 67 PATSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELE--RIEKVSVLRND--------KREGLM 136 (157)
Q Consensus 67 p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~--~~~~v~vi~~~--------~n~G~~ 136 (157)
|+||||||+||++ .+|.+||+|+++|+++++ |||||||||+|++.+.... ..+++++++.+ +|.|.+
T Consensus 1 p~vSViIp~yn~~-~~l~~~l~Sl~~q~~~~~--eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G~~ 77 (255)
T 1qg8_A 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSDF--ELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTRYA 77 (255)
T ss_dssp CCEEEEEEESSCT-TTHHHHHHHHHTCSCCCE--EEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSCHHH
T ss_pred CeEEEEEEcCCCH-HHHHHHHHHHHhccCCce--EEEEEECCCCchHHHHHHHHhhcCCEEEEecccccccccccccCHH
Confidence 6799999999999 599999999999999888 9999999999998543322 36799999998 899999
Q ss_pred HHHHHHHHHcCCCEEEEEcCC
Q psy3172 137 RSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 137 ~a~n~g~~~a~gd~i~flDa~ 157 (157)
.|+|.|++.|+|+||+|+|+|
T Consensus 78 ~a~N~gi~~a~g~~i~~lD~D 98 (255)
T 1qg8_A 78 ALINQAIEMAEGEYITYATDD 98 (255)
T ss_dssp HHHHHHHHHCCCSEEEEEETT
T ss_pred HHHHHHHHHcCCCEEEEeCCC
Confidence 999999999999999999998
No 6
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.79 E-value=4.1e-19 Score=140.94 Aligned_cols=90 Identities=19% Similarity=0.174 Sum_probs=74.6
Q ss_pred CCCcEEEEEEecCCchHHHHHHHHHHHhhCCCC-CccEEEEEeCCCCCchHHHHHhcCCC----EEEE-EcCCCCCHHHH
Q psy3172 65 DLPATSVIITFHNEARSALLRSVVSIINRTPAH-LLKEIILVDDFSDDPSDGEELERIEK----VSVL-RNDKREGLMRS 138 (157)
Q Consensus 65 ~~p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~-~~~eIivvddgS~d~t~~~~~~~~~~----v~vi-~~~~n~G~~~a 138 (157)
..|+||||||+||++ .+|.+||+|+++|+++. + |||||||||+|+|.+...+.... ++++ ..+.|.|++.|
T Consensus 46 ~~~~vSViIp~yN~~-~~l~~~l~sl~~q~~~~~~--eiivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~G~~~a 122 (329)
T 3ckj_A 46 AGRTISVVLPALDEE-DTIGSVIDSISPLVDGLVD--ELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPGKGEA 122 (329)
T ss_dssp TTCCEEEEEEESSCT-TTHHHHHHHHGGGBTTTBS--EEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCCSHHHH
T ss_pred cCCcEEEEEeeCCCH-HHHHHHHHHHHHhhCCCCc--EEEEEeCCCCchHHHHHHHhhhhhccceeeeccCCCCCCHHHH
Confidence 368999999999998 59999999999999874 6 99999999999986443332221 1222 16789999999
Q ss_pred HHHHHHHcCCCEEEEEcCC
Q psy3172 139 RVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 139 ~n~g~~~a~gd~i~flDa~ 157 (157)
+|.|++.|+|+||+|||+|
T Consensus 123 ~n~g~~~a~gd~i~~lD~D 141 (329)
T 3ckj_A 123 LWRSLAASRGDIVVFVDSD 141 (329)
T ss_dssp HHHHHHHCCCSEEEECCTT
T ss_pred HHHHHHhCCCCEEEEECCC
Confidence 9999999999999999998
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.79 E-value=6.5e-19 Score=149.77 Aligned_cols=90 Identities=23% Similarity=0.278 Sum_probs=80.3
Q ss_pred CCCCcEEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHH---HHhcCCCEEEEEcCCCCCHHHHHH
Q psy3172 64 RDLPATSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGE---ELERIEKVSVLRNDKREGLMRSRV 140 (157)
Q Consensus 64 ~~~p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~---~~~~~~~v~vi~~~~n~G~~~a~n 140 (157)
..+|+||||||+||++ .+|.+||+|+++|+++++ |||||||||+|+|.+. ..+.++++++++ .+|.|++.|+|
T Consensus 372 ~~~~~vsiii~~yn~~-~~l~~~l~s~~~q~~~~~--eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~n~G~~~a~n 447 (625)
T 2z86_A 372 KRVPLVSIYIPAYNCS-KYIVRCVESALNQTITDL--EVCICDDGSTDDTLRILQEHYANHPRVRFIS-QKNKGIGSASN 447 (625)
T ss_dssp CSSCSEEEEEEESSCT-TTHHHHHHHHHSSSCCSE--EEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-ECCCCHHHHHH
T ss_pred ccCCeEEEEEeCCCCH-HHHHHHHHHHHhCcCCCe--EEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CCCCCHHHHHH
Confidence 3468999999999998 599999999999999888 9999999999998542 233567899997 68999999999
Q ss_pred HHHHHcCCCEEEEEcCC
Q psy3172 141 KGADAATAPVLTFLDSH 157 (157)
Q Consensus 141 ~g~~~a~gd~i~flDa~ 157 (157)
.|++.|+|+||+|||+|
T Consensus 448 ~g~~~a~g~~i~~ld~D 464 (625)
T 2z86_A 448 TAVRLCRGFYIGQLDSD 464 (625)
T ss_dssp HHHHHCCSSEEEECCTT
T ss_pred HHHHhcCCCEEEEECCC
Confidence 99999999999999998
No 8
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.77 E-value=1.9e-20 Score=162.36 Aligned_cols=89 Identities=20% Similarity=0.345 Sum_probs=0.0
Q ss_pred CCcEEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHH---Hhc-CCCEEEEEcCCCCCHHHHHHH
Q psy3172 66 LPATSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEE---LER-IEKVSVLRNDKREGLMRSRVK 141 (157)
Q Consensus 66 ~p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~---~~~-~~~v~vi~~~~n~G~~~a~n~ 141 (157)
||+||||||+||++ .+|.+||+|+++|+++++ |||||||||+|+|.+.. .+. .+++++++.++|.|.+.|+|.
T Consensus 1 Mp~vSVIIp~yN~~-~~L~~~L~Sll~Qt~~~~--EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~ 77 (729)
T 3l7i_A 1 MNKLTIIVTYYNAE-EYITGCLESIKQQRTQDF--NLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNI 77 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCH-HHHHHHHHHHHhCCCCCe--EEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHH
Confidence 58899999999999 599999999999999988 99999999999985322 223 358999999899999999999
Q ss_pred HHHHcCCCEEEEEcCC
Q psy3172 142 GADAATAPVLTFLDSH 157 (157)
Q Consensus 142 g~~~a~gd~i~flDa~ 157 (157)
|++.|+|+||+|||+|
T Consensus 78 gi~~A~gdyI~flD~D 93 (729)
T 3l7i_A 78 ALEEVETPYFMFLDAD 93 (729)
T ss_dssp ----------------
T ss_pred HHHhccCCEEEEECCC
Confidence 9999999999999997
No 9
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.75 E-value=1.8e-18 Score=140.51 Aligned_cols=89 Identities=16% Similarity=0.157 Sum_probs=71.8
Q ss_pred CCcEEEEEEecCCchHHHHHHHHHHHh---hCCCCCccEEEEEeCCCCCchHHHHHhcCCC-----EEEEEcCCCCCHHH
Q psy3172 66 LPATSVIITFHNEARSALLRSVVSIIN---RTPAHLLKEIILVDDFSDDPSDGEELERIEK-----VSVLRNDKREGLMR 137 (157)
Q Consensus 66 ~p~vSiIIp~yn~~~~~l~~~l~sl~~---q~~~~~~~eIivvddgS~d~t~~~~~~~~~~-----v~vi~~~~n~G~~~ 137 (157)
.|+||||||+||++ ..|.+||.++.+ |.+.++ |||||||||+|+|.+...+...+ +++++.+.|.|++.
T Consensus 93 ~p~vSVVIP~yNe~-~~l~~~l~sl~~~l~~~~~~~--EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~ 169 (387)
T 3f1y_A 93 GLTVSAVLPSRNVA-DTVGGIIDEIHALNERAPLID--QILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGD 169 (387)
T ss_dssp TCCEEEEEEESSCT-TTHHHHHHHHHHHHHHSCCCS--EEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHH
T ss_pred CCeEEEEEEcCCCH-HHHHHHHHHHHHHHhcCCCCe--EEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHH
Confidence 57899999999999 599999999986 344466 99999999999996433332211 11234567999999
Q ss_pred HHHHHHHHcCCCEEEEEcCC
Q psy3172 138 SRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 138 a~n~g~~~a~gd~i~flDa~ 157 (157)
|+|.|++.|+|+||+|||||
T Consensus 170 A~n~G~~~A~gd~i~~lDaD 189 (387)
T 3f1y_A 170 AMWRALSVTRGDLVLYIDAD 189 (387)
T ss_dssp HHHHHTTTCCSSEEEECCTT
T ss_pred HHHHHHHhcCCCEEEEEcCC
Confidence 99999999999999999998
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.72 E-value=1.6e-17 Score=141.21 Aligned_cols=90 Identities=22% Similarity=0.249 Sum_probs=75.6
Q ss_pred CCCcEEEEEEecCCchHHHHHHHHHHHhhCCC-CCccEEEEEeCCCCCchHHHHH--hcCCCEEEEEcCC-CCCHHHHHH
Q psy3172 65 DLPATSVIITFHNEARSALLRSVVSIINRTPA-HLLKEIILVDDFSDDPSDGEEL--ERIEKVSVLRNDK-REGLMRSRV 140 (157)
Q Consensus 65 ~~p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~-~~~~eIivvddgS~d~t~~~~~--~~~~~v~vi~~~~-n~G~~~a~n 140 (157)
.+|.||||||+||++ ..|.+||.|++.|+++ .+ |||||||||+|++.+... ....+++++..+. +.|++.|+|
T Consensus 91 ~~p~vsviIp~~n~~-~~l~~~l~sl~~q~~~~~~--eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N 167 (625)
T 2z86_A 91 IIDGLSIVIPTYNRA-KILAITLACLCNQKTIYDY--EVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRN 167 (625)
T ss_dssp CCCCEEEEEEESSCH-HHHHHHHHHHHTCCCSSCE--EEEEEEESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHH
T ss_pred cCCcEEEEEecCCcH-HHHHHHHHHHHhhccCCCe--EEEEEeCCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHH
Confidence 468999999999998 5999999999999854 55 999999999999753322 2345788888654 346999999
Q ss_pred HHHHHcCCCEEEEEcCC
Q psy3172 141 KGADAATAPVLTFLDSH 157 (157)
Q Consensus 141 ~g~~~a~gd~i~flDa~ 157 (157)
.|++.|+|+||+|+|+|
T Consensus 168 ~g~~~a~g~~v~~lD~D 184 (625)
T 2z86_A 168 LGLRAAKYNYVAILDCD 184 (625)
T ss_dssp HHHHHCCSSEEEEECTT
T ss_pred HHHHhCCcCEEEEECCC
Confidence 99999999999999998
No 11
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.68 E-value=1.2e-16 Score=140.02 Aligned_cols=95 Identities=17% Similarity=0.231 Sum_probs=77.0
Q ss_pred CCCCCcEEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHH-----------------HHHhcCCCEE
Q psy3172 63 PRDLPATSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDG-----------------EELERIEKVS 125 (157)
Q Consensus 63 ~~~~p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~-----------------~~~~~~~~v~ 125 (157)
+...|+||||||+||++...+.+||+|+++|+|++...||+||||||+|++.+ +.+....+++
T Consensus 136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~ 215 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVV 215 (802)
T ss_dssp TTTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred ccCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcE
Confidence 34578999999999999535599999999999987334999999999998731 1112334677
Q ss_pred EEEcCCC-CCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 126 VLRNDKR-EGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 126 vi~~~~n-~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
++..+++ .|++.|+|.|++.++||||+|+|||
T Consensus 216 ~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD 248 (802)
T 4hg6_A 216 YSTRERNEHAKAGNMSAALERLKGELVVVFDAD 248 (802)
T ss_dssp EEECSSCCSHHHHHHHHHHHHCCCSEEEECCTT
T ss_pred EEEecCCCCcchHHHHHHHHhcCCCEEEEECCC
Confidence 7776665 7899999999999999999999998
No 12
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.68 E-value=4.8e-17 Score=139.87 Aligned_cols=88 Identities=11% Similarity=0.031 Sum_probs=74.9
Q ss_pred CCcEEEEEEecCCchHHHHHHHHHHHhhCC---CCCccEEEEEeCCCCCch----HHHHH-hcCCCEEEEEcCCCCCHHH
Q psy3172 66 LPATSVIITFHNEARSALLRSVVSIINRTP---AHLLKEIILVDDFSDDPS----DGEEL-ERIEKVSVLRNDKREGLMR 137 (157)
Q Consensus 66 ~p~vSiIIp~yn~~~~~l~~~l~sl~~q~~---~~~~~eIivvddgS~d~t----~~~~~-~~~~~v~vi~~~~n~G~~~ 137 (157)
.|+||||||+||+. ..|.+||+|+++|++ ..+ |||||||||+|.+ +.+.+ ...+++++++.+ |.|.+.
T Consensus 179 ~pkVSVVIptYN~~-~~L~~~L~SL~~qt~~~~~~~--EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~~-N~G~a~ 254 (657)
T 4fix_A 179 TANIAVGIPTFNRP-ADCVNALRELTADPLVDQVIG--AVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQP-NLGGSG 254 (657)
T ss_dssp CCCEEEECCBSSCH-HHHHHHHHHHTTSHHHHTTEE--EEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEECC-CCHHHH
T ss_pred CCeEEEEEEecCCH-HHHHHHHHHHHcCccccCCCC--EEEEEECcCCCccchHHHHHHHHhcCCCEEEEECC-CCCHHH
Confidence 57999999999999 599999999999986 555 9999999999842 22333 245689999987 999999
Q ss_pred HHHHHHHHcC----CCEEEEEcCC
Q psy3172 138 SRVKGADAAT----APVLTFLDSH 157 (157)
Q Consensus 138 a~n~g~~~a~----gd~i~flDa~ 157 (157)
|+|.|++.|. ++||+|||+|
T Consensus 255 a~N~Gl~~A~g~~~~dyIlfLD~D 278 (657)
T 4fix_A 255 GYSRVMYEALKNTDCQQILFMDDD 278 (657)
T ss_dssp HHHHHHHHHHHHCCCSEEEEECSS
T ss_pred HHHHHHHHHHhcCCCCEEEEECCC
Confidence 9999999984 5899999998
No 13
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.61 E-value=2e-15 Score=120.18 Aligned_cols=85 Identities=18% Similarity=0.216 Sum_probs=69.7
Q ss_pred CCcEEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchH-----HHHHh--cCCCEEEEEcCCCCCHHHH
Q psy3172 66 LPATSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSD-----GEELE--RIEKVSVLRNDKREGLMRS 138 (157)
Q Consensus 66 ~p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~-----~~~~~--~~~~v~vi~~~~n~G~~~a 138 (157)
..++|||||+||+.. . +|++++.|++.++ |||+|||||+|.+. ...++ ...++.++| ++|.|.+.|
T Consensus 52 ~~klSIVVPvYNEe~-~---lLesVl~qi~~d~--eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viH-Qkn~gls~A 124 (391)
T 2wvl_A 52 LEQTAIVVPTRNERL-K---LLEGVLSGIPHEA--LILVASNSSPDRFQMERDLLEEFAHLTERPALIFH-QKDPALAEA 124 (391)
T ss_dssp HTTEEEEEEESSCCH-H---HHHHHHHTSCTTS--EEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEE-TTCHHHHHH
T ss_pred HhceEEEEeccCcHH-H---HHHHHHhcCCCCc--eEEEEECCCCCChHhHHHHHHHHHhhcccceEEEe-ccChHHHHH
Confidence 357999999999994 3 6999999999888 99999999999882 22333 367899997 468888888
Q ss_pred HH-----------------------HHHHHc---CCCEEEEEcCC
Q psy3172 139 RV-----------------------KGADAA---TAPVLTFLDSH 157 (157)
Q Consensus 139 ~n-----------------------~g~~~a---~gd~i~flDa~ 157 (157)
+| .|+..| .|+||.|+|||
T Consensus 125 r~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDAD 169 (391)
T 2wvl_A 125 LRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDAD 169 (391)
T ss_dssp HHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCc
Confidence 86 266666 79999999998
No 14
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.56 E-value=1.5e-14 Score=113.21 Aligned_cols=70 Identities=16% Similarity=0.149 Sum_probs=60.8
Q ss_pred CCCcEEEEEEecCCchHHHHHHHHHHH---hhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHH
Q psy3172 65 DLPATSVIITFHNEARSALLRSVVSII---NRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVK 141 (157)
Q Consensus 65 ~~p~vSiIIp~yn~~~~~l~~~l~sl~---~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~ 141 (157)
..|+||||||+||++ ..|.+||.|++ .|++.++ |||||||+++ ..++.+.++|.
T Consensus 63 ~~~~VSIIIP~yN~~-~~L~~~L~sl~~~l~q~~~~~--EIiVVdds~d--------------------~~f~~a~a~N~ 119 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQ-EHLKYWLYYLHPVLQRQQLDY--GIYVINQAGD--------------------TIFNRAKLLNV 119 (287)
T ss_dssp CSCEEEEEEEESSCH-HHHHHHHHHHHHHHHHTTCEE--EEEEEEECSS--------------------SCCCHHHHHHH
T ss_pred cCCcEEEEEeeCCCH-HHHHHHHHHHHHHHHHhcCCc--eEEEEEeCCC--------------------Cccchhhhhhh
Confidence 357899999999999 59999999999 7888777 9999999432 12368899999
Q ss_pred HH----HHcCCCEEEEEcCC
Q psy3172 142 GA----DAATAPVLTFLDSH 157 (157)
Q Consensus 142 g~----~~a~gd~i~flDa~ 157 (157)
|+ +.|+|+||+|+|+|
T Consensus 120 G~~~al~~A~gd~i~flD~D 139 (287)
T 2fy7_A 120 GFQEALKDYDYTCFVFSDVD 139 (287)
T ss_dssp HHHHHHHHSCCCEEEEECTT
T ss_pred HHHHHHHhCCCCEEEEECCC
Confidence 99 89999999999998
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.49 E-value=8.1e-14 Score=113.46 Aligned_cols=84 Identities=12% Similarity=0.062 Sum_probs=60.1
Q ss_pred EEEEEecCCchHHHHHHHHHHHh-hCCCCCccEEEEEeCCCCCchHHHHH--------hcCCCEEEEEcC--C--CCCHH
Q psy3172 70 SVIITFHNEARSALLRSVVSIIN-RTPAHLLKEIILVDDFSDDPSDGEEL--------ERIEKVSVLRND--K--REGLM 136 (157)
Q Consensus 70 SiIIp~yn~~~~~l~~~l~sl~~-q~~~~~~~eIivvddgS~d~t~~~~~--------~~~~~v~vi~~~--~--n~G~~ 136 (157)
|+|||.+|++ .+..++..+.. +..+.+ |||||||||+|+|.+... +...++.++... + |.|++
T Consensus 2 slVIiP~~eE--~I~~vl~~l~~~~~~~~~--EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG 77 (397)
T 2bo4_A 2 SLVVFPFKHE--HPEVLLHNVRVAAAHPRV--HEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKG 77 (397)
T ss_dssp CEEEEECCSS--CHHHHHHHHHHHHHSTTC--CEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHH
T ss_pred cEEEEeCCcc--CHHHHHHHHHHhccCCCe--EEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHH
Confidence 4455555554 46777877753 334566 999999999999965433 123344333323 3 89999
Q ss_pred HHHHHHH----HHcCCCEEEEEcCC
Q psy3172 137 RSRVKGA----DAATAPVLTFLDSH 157 (157)
Q Consensus 137 ~a~n~g~----~~a~gd~i~flDa~ 157 (157)
.|++.|+ +.++|++++|||||
T Consensus 78 ~Al~~G~~~Al~~a~gd~vv~mDAD 102 (397)
T 2bo4_A 78 DGMNTALRYFLEETQWERIHFYDAD 102 (397)
T ss_dssp HHHHHHHHHHHHHCCCSEEEECCTT
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 9999999 89999999999998
No 16
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.44 E-value=1.2e-13 Score=105.38 Aligned_cols=69 Identities=10% Similarity=-0.006 Sum_probs=56.1
Q ss_pred CCcEEEEEEecCCchHHHHHHHHHHHhhC-CCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHH
Q psy3172 66 LPATSVIITFHNEARSALLRSVVSIINRT-PAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGAD 144 (157)
Q Consensus 66 ~p~vSiIIp~yn~~~~~l~~~l~sl~~q~-~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~ 144 (157)
.+.+||| |+||+. ..|.+||+|+.... .+.. .|||||||+|+|. .|.+.|+|.|++
T Consensus 15 ~~~iSII-~~yN~~-~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~--------------------~g~a~a~N~Gi~ 71 (249)
T 2nxv_A 15 TLMFSVC-SLVRDQ-AKYDRLLESFERFGFTPDK-AEFLAADNREGNQ--------------------FHGFSWHKQMLP 71 (249)
T ss_dssp CCSEEEE-EEESCH-HHHHHHHHHHHHTTCCTTT-EEEEEEECTTSCS--------------------CCTTTHHHHHGG
T ss_pred cceEEEE-EeeCCH-HHHHHHHHHHHHhccCCCc-EEEEEEECCCCCc--------------------ccHHHHHHHHHH
Confidence 5689975 679998 59999999876532 1221 3999999999862 367899999999
Q ss_pred HcCCCEEEEEcCC
Q psy3172 145 AATAPVLTFLDSH 157 (157)
Q Consensus 145 ~a~gd~i~flDa~ 157 (157)
.|+|+||+|||+|
T Consensus 72 ~A~g~yl~fln~D 84 (249)
T 2nxv_A 72 RCKGRYVIFCHED 84 (249)
T ss_dssp GCCSSEEEEEETT
T ss_pred hcCCCEEEEECCC
Confidence 9999999999997
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.42 E-value=8.4e-13 Score=106.92 Aligned_cols=85 Identities=21% Similarity=0.289 Sum_probs=64.6
Q ss_pred CcEEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCch------HHH--HHhc--CCCEEEEEcCC-----
Q psy3172 67 PATSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPS------DGE--ELER--IEKVSVLRNDK----- 131 (157)
Q Consensus 67 p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t------~~~--~~~~--~~~v~vi~~~~----- 131 (157)
.++|||||+|||+. .+ |..++.+....+ |||+|||||+|++ ... .++. ...+.+++...
T Consensus 51 ~~iSVVIP~yNEE~-~l---I~~vL~~i~~~~--eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~~~~Vl~~~~p~v~~ 124 (394)
T 2zu9_A 51 GKMAVIVPMKNEKL-HL---VDGVLKAIPHKC--PIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSKIIMIHQKDPGLAK 124 (394)
T ss_dssp TTEEEEEEESSCCH-HH---HHHHHHHSCTTS--CEEEEECCCCSSSCHHHHHHHHHHHHHHHHCCCEEEEETTCHHHHH
T ss_pred CCEEEEEecCcccH-HH---HHHHHHcCCCCc--EEEEEECcCcccccchhhHHHHHHHHhhccccceEEEecCCcchhH
Confidence 46999999999995 43 777777765555 9999999997766 211 1111 34566666543
Q ss_pred -----------------CCCHHHHHHHHHHHc---CCCEEEEEcCC
Q psy3172 132 -----------------REGLMRSRVKGADAA---TAPVLTFLDSH 157 (157)
Q Consensus 132 -----------------n~G~~~a~n~g~~~a---~gd~i~flDa~ 157 (157)
+.|++.|.-.|+..| +|++|+|+|||
T Consensus 125 ~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaD 170 (394)
T 2zu9_A 125 AFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDAD 170 (394)
T ss_dssp HHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCC
Confidence 149999999999999 99999999998
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.73 E-value=4e-08 Score=78.47 Aligned_cols=88 Identities=10% Similarity=0.197 Sum_probs=62.6
Q ss_pred CcEEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcC-CCEEEEE---------cCCCCCHH
Q psy3172 67 PATSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERI-EKVSVLR---------NDKREGLM 136 (157)
Q Consensus 67 p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~-~~v~vi~---------~~~n~G~~ 136 (157)
+.++|||++||.. . |.+||+||++|.+.....+|||.|||+..++. +.+..+ .++..+. .++|.|..
T Consensus 2 ~~~pViI~~yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~-~vi~~~~~~I~~~~~~d~~~~~~~~~N~g~~ 78 (343)
T 1fo8_A 2 AVIPILVIACDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETA-QVIASYGSAVTHIRQPDLSNIAVQPDHRKFQ 78 (343)
T ss_dssp CCCCEEEEESSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHH-HHHHTTGGGSEEEECSCCCCCCCCTTCGGGH
T ss_pred CcccEEEEECCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHH-HHHHHcCCceEEEEcCCccccccchhhcCcc
Confidence 4588999999999 6 99999999999854323399999999986653 333332 1233332 34455642
Q ss_pred ----------HHHHHHHHHcCCCEEEEEcCC
Q psy3172 137 ----------RSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 137 ----------~a~n~g~~~a~gd~i~flDa~ 157 (157)
.|+|.++..+++++++|||.|
T Consensus 79 ~y~~ia~h~~~al~~vf~~~~~~~vIiLEDD 109 (343)
T 1fo8_A 79 GYYKIARHYRWALGQIFHNFNYPAAVVVEDD 109 (343)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCSEEEEEETT
T ss_pred cchhHhHHHHHHHHHHHHhccCCEEEEEcCC
Confidence 466666777789999999976
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=96.44 E-value=0.028 Score=43.38 Aligned_cols=68 Identities=15% Similarity=0.190 Sum_probs=49.1
Q ss_pred CcEEEEEEecCCchHHHHHHHH---HHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHH
Q psy3172 67 PATSVIITFHNEARSALLRSVV---SIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGA 143 (157)
Q Consensus 67 p~vSiIIp~yn~~~~~l~~~l~---sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~ 143 (157)
-+|.||||.+|... .|...|. -.|....-.+ .|+||+... ...++.+..+|.|+
T Consensus 51 ~kvAIIIPyRdR~~-hL~~fl~~lhp~L~rQ~l~y--~I~VieQ~~--------------------~~~FNRa~LlNvGf 107 (287)
T 3lw6_A 51 HKMALLVPFRDRFE-ELLQFVPHMTAFLKRQGVAH--HIFVLNQVD--------------------RFRFNRASLINVGF 107 (287)
T ss_dssp CEEEEEEEESSCHH-HHHHHHHHHHHHHHHTTCEE--EEEEEEECS--------------------SSCCCHHHHHHHHH
T ss_pred ceEEEEEEeCCHHH-HHHHHHHHHHHHHHHcCCce--EEEEEecCC--------------------CCccchhheecccH
Confidence 47999999999984 6655554 4444332234 888887531 24567999999999
Q ss_pred HHcC--CCEEEEEcCC
Q psy3172 144 DAAT--APVLTFLDSH 157 (157)
Q Consensus 144 ~~a~--gd~i~flDa~ 157 (157)
..|. .++++|-|.|
T Consensus 108 ~ea~~~~d~~ifHDVD 123 (287)
T 3lw6_A 108 QFASDVYDYIAMHDVD 123 (287)
T ss_dssp HHSCTTCCEEEEECTT
T ss_pred HHHhccCCEEEEeccc
Confidence 9885 6899999876
No 20
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=94.60 E-value=0.21 Score=37.73 Aligned_cols=87 Identities=22% Similarity=0.201 Sum_probs=52.9
Q ss_pred CCcEEEEEEecCCchH--HHHHHHHHHHhhCCCCCccEEEEEeCCCCCc-hHHHHHhcC-CCEEEEEcCC---------C
Q psy3172 66 LPATSVIITFHNEARS--ALLRSVVSIINRTPAHLLKEIILVDDFSDDP-SDGEELERI-EKVSVLRNDK---------R 132 (157)
Q Consensus 66 ~p~vSiIIp~yn~~~~--~l~~~l~sl~~q~~~~~~~eIivvddgS~d~-t~~~~~~~~-~~v~vi~~~~---------n 132 (157)
+|.|-||.|+|..... .|-++-+. +.+.+ ++ ..|||+|+.... .....+++. -..+.+..+. .
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~T-L~~Vp-~l--~WIVVEd~~~~~~~v~~lL~~sgl~y~HL~~~~~~~~~~~~~p 77 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANT-FRQVA-QL--HWILVEDAAARSELVSRFLARAGLPSTHLHVPTPRRYKRPGLP 77 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHH-HTTST-TE--EEEEEESSSSCCHHHHHHHHHSCSCEEEEECCCCCC----CCC
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHH-HhcCC-ce--EEEEEcCCCCCCHHHHHHHHHcCCceEEEecCCccccCCCCCc
Confidence 5889999999987643 44443333 33443 46 999999988654 344555532 2344443321 1
Q ss_pred CCHHHHHHHHHHHcC---------CCEEEEEcCC
Q psy3172 133 EGLMRSRVKGADAAT---------APVLTFLDSH 157 (157)
Q Consensus 133 ~G~~~a~n~g~~~a~---------gd~i~flDa~ 157 (157)
.| ...||.|++..+ .-+|.|.|-|
T Consensus 78 rg-~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDd 110 (246)
T 2d0j_A 78 RA-TEQRNAGLAWLRQRHQHQRAQPGVLFFADDD 110 (246)
T ss_dssp CC-HHHHHHHHHHHHHHSCSSSCCCCEEEECCTT
T ss_pred ch-HHHHHHHHHHHHHhcccccCccceEEEccCC
Confidence 22 368999986542 3578888865
No 21
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=94.37 E-value=0.16 Score=38.50 Aligned_cols=88 Identities=17% Similarity=0.171 Sum_probs=52.9
Q ss_pred CCcEEEEEEecCCchH--HHHHHHHHHHhhCCCCCccEEEEEeCCCC-CchHHHHHhcC-CCEEEEEcCC--C-------
Q psy3172 66 LPATSVIITFHNEARS--ALLRSVVSIINRTPAHLLKEIILVDDFSD-DPSDGEELERI-EKVSVLRNDK--R------- 132 (157)
Q Consensus 66 ~p~vSiIIp~yn~~~~--~l~~~l~sl~~q~~~~~~~eIivvddgS~-d~t~~~~~~~~-~~v~vi~~~~--n------- 132 (157)
+|.|-+|.|||..... .|-++-+.+ .+. +++ ..|||+|+.. .+.....+++. -..+.+..+. +
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL-~~V-p~L--~WIVVEd~~~~t~~va~lL~~sgl~y~HL~~~~p~~~~~~~~~ 77 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTL-LHV-PNL--HWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDA 77 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHH-TTS-SSE--EEEEEESSSSCCHHHHHHHHHHCCEEEEEECCCCHHHHCC---
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhh-ccC-Cce--EEEEEeCCCCCCHHHHHHHHHcCCceEEeecCCCccccccccc
Confidence 5789999999987643 455554554 333 467 9999999764 34444555432 2233333321 1
Q ss_pred -----CCHHHHHHHHHHHcC---------CCEEEEEcCC
Q psy3172 133 -----EGLMRSRVKGADAAT---------APVLTFLDSH 157 (157)
Q Consensus 133 -----~G~~~a~n~g~~~a~---------gd~i~flDa~ 157 (157)
.--...||.|++..+ .-+|.|.|-|
T Consensus 78 ~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDd 116 (253)
T 1v84_A 78 RDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDD 116 (253)
T ss_dssp ----CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTT
T ss_pred cCccccchHHHHHHHHHHHHHhcccccccceeEEEecCC
Confidence 012357999987653 2478888765
No 22
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=93.73 E-value=0.63 Score=35.78 Aligned_cols=80 Identities=18% Similarity=0.093 Sum_probs=44.7
Q ss_pred CCCCcEEEEEEecCCchH--HHHHHHHHHHhhCCCCCccEEEEEeCCCC-CchHHHHHhcC-CCEEEEEcCCCCC-----
Q psy3172 64 RDLPATSVIITFHNEARS--ALLRSVVSIINRTPAHLLKEIILVDDFSD-DPSDGEELERI-EKVSVLRNDKREG----- 134 (157)
Q Consensus 64 ~~~p~vSiIIp~yn~~~~--~l~~~l~sl~~q~~~~~~~eIivvddgS~-d~t~~~~~~~~-~~v~vi~~~~n~G----- 134 (157)
...|.|-||.|||..... .|-++- ..+.+.+ ++ ..|||+|+.. .+.....+++. -..+.+..+.+.+
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~LtRLa-~TL~~Vp-~L--~WIVVEd~~~~t~~va~lL~rsGl~y~HL~~~~p~~~~~~~ 93 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAELVRLS-QTLSLVP-RL--HWLLVEDAEGPTPLVSGLLAASGLLFTHLVVLTPKAQRLRE 93 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHHHHHHH-HHHTTSS-SE--EEEEEESSSSCCHHHHHHHHHHCSEEEEEECCCC-------
T ss_pred CCCCeEEEEeCCCCCcchhHHHHHHH-HHHhcCC-ce--EEEEEcCCCCCCHHHHHHHHHcCCceEEeccCCCccccccc
Confidence 347899999999987642 333333 3334443 66 9999999754 34444555432 2233333321111
Q ss_pred ---------HHHHHHHHHHHcC
Q psy3172 135 ---------LMRSRVKGADAAT 147 (157)
Q Consensus 135 ---------~~~a~n~g~~~a~ 147 (157)
-...||.|++..+
T Consensus 94 ~dp~w~~~rg~~QRN~AL~~Ir 115 (281)
T 3cu0_A 94 GEPGWVHPRGVEQRNKALDWLR 115 (281)
T ss_dssp ----CCCCCSHHHHHHHHHHHT
T ss_pred cccccccchhHHHHHHHHHHHH
Confidence 1467999997766
No 23
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=82.42 E-value=8.6 Score=27.13 Aligned_cols=50 Identities=10% Similarity=0.115 Sum_probs=34.7
Q ss_pred EEEEEeCCCCCchHHHHHhcCCCEEEEEcC-CCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 101 EIILVDDFSDDPSDGEELERIEKVSVLRND-KREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 101 eIivvddgS~d~t~~~~~~~~~~v~vi~~~-~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
+|+|+-+.... ..+. .++++..+ ...|.+.+...|++....+.++++.+|
T Consensus 56 ~i~vv~~~~~~----~~~~---~~~~v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D 106 (201)
T 2e8b_A 56 EVYIVAKDREK----FSFL---NAPVVLDEFEESASIIGLYTALKHAKEENVFVLSGD 106 (201)
T ss_dssp EEEEEESCSGG----GGGG---TCCEEECCCSSCCHHHHHHHHHHHCSSSEEEEEETT
T ss_pred EEEEEeCcHHH----hhcC---CceEEecCCCCCCcHHHHHHHHHHcCCCCEEEEeCC
Confidence 88887643322 1121 45666643 457999999999998888899999887
No 24
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=79.22 E-value=4.3 Score=31.33 Aligned_cols=86 Identities=16% Similarity=0.164 Sum_probs=52.1
Q ss_pred CCcEEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc----CCCEEEEEcCCCCCHHHHHHH
Q psy3172 66 LPATSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER----IEKVSVLRNDKREGLMRSRVK 141 (157)
Q Consensus 66 ~p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~----~~~v~vi~~~~n~G~~~a~n~ 141 (157)
...+++||-+|+.. ..|.+.|..+.... ...||+||=++............ ...|+++..+.|. + ..|-.
T Consensus 27 ~~~FTvvi~ty~R~-~~L~~lv~~~~~~~---~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~ns-L-nnRF~ 100 (293)
T 1omz_A 27 LDSFTLIMQTYNRT-DLLLRLLNHYQAVP---SLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANK-M-RNRLQ 100 (293)
T ss_dssp TTCEEEEEEESSCH-HHHHHHHHHHTTST---TEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCC-G-GGGGS
T ss_pred CCceEEEEEeeccc-HHHHHHHHHHhcCC---CCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCc-h-hhccC
Confidence 34799999999986 58888877653332 24599888666543222222222 2458888776551 1 11222
Q ss_pred HHHHcCCCEEEEEcCC
Q psy3172 142 GADAATAPVLTFLDSH 157 (157)
Q Consensus 142 g~~~a~gd~i~flDa~ 157 (157)
-....+.+-|+.+|-|
T Consensus 101 p~~~i~T~AVLslDDD 116 (293)
T 1omz_A 101 VFPEVETNAVLMVDDD 116 (293)
T ss_dssp CCTTCCSSEEEEECTT
T ss_pred CCccCCcCEEEEEcCC
Confidence 2344578889999876
No 25
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=79.17 E-value=13 Score=27.43 Aligned_cols=72 Identities=10% Similarity=0.022 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc----CCCEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER----IEKVSVLRNDKREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~----~~~v~vi~~~~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
.|..+|+++..... .+|+|+-+......+...+.. ...+.++..+...|.+.++..++.....+.++++.+|
T Consensus 57 li~~~l~~l~~~g~----~~iivv~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D 132 (269)
T 4ecm_A 57 MIYHAVYKLKQCDI----TDIMIITGKEHMGDVVSFLGSGQEFGVSFTYRVQDKAGGIAQALGLCEDFVGNDRMVVILGD 132 (269)
T ss_dssp HHHHHHHHHHHTTC----CEEEEEECTTTHHHHHHHHTTSGGGTCEEEEEECSSCCCHHHHHHTTHHHHTTSEEEEEETT
T ss_pred HHHHHHHHHHHCCC----CEEEEECChhhHHHHHHHHhhccccCceEEEeeCCccCcHHHHHHHHHHhcCCCcEEEEeCC
Confidence 78888888877531 288877654332333344432 1245566666678999998888887777888888876
No 26
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=77.53 E-value=7.4 Score=28.36 Aligned_cols=23 Identities=26% Similarity=0.304 Sum_probs=17.6
Q ss_pred HHHHHHHHHHH----cCCCEEEEEcCC
Q psy3172 135 LMRSRVKGADA----ATAPVLTFLDSH 157 (157)
Q Consensus 135 ~~~a~n~g~~~----a~gd~i~flDa~ 157 (157)
...|||..+.. ...++++|||||
T Consensus 37 I~raRN~lv~~Fl~~~~~dhllfIDAD 63 (203)
T 2c0n_A 37 VAVQREIALDMFLEMKDYDTLAFLDED 63 (203)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 55777776554 467999999998
No 27
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=75.30 E-value=21 Score=26.63 Aligned_cols=71 Identities=11% Similarity=0.122 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc------------------------CCCEEEEEcCCCCCHHH
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER------------------------IEKVSVLRNDKREGLMR 137 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~------------------------~~~v~vi~~~~n~G~~~ 137 (157)
.|...++.+..... .+|+|+-+.. ...+...+.. ...+.++..+...|.+.
T Consensus 47 li~~~l~~l~~~g~----~~i~vv~~~~-~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~ 121 (297)
T 2ux8_A 47 LIQYAVDEAVEAGI----EQMIFVTGRG-KSALEDHFDIAYELEATMAARGKSLDVLDGTRLKPGNIAYVRQQEPMGLGH 121 (297)
T ss_dssp HHHHHHHHHHHTTC----CEEEEEECTT-CHHHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTTSEEEEECCSCCCHHH
T ss_pred HHHHHHHHHHhCCC----CEEEEEeCCC-HHHHHHHHhhhhhhhhhhhhccchhhhhhhcccCCCceEEEeCCCCCChHH
Confidence 78888888776531 2887776543 3333333321 13577777777789999
Q ss_pred HHHHHHHHcCCCEEEEEcCC
Q psy3172 138 SRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 138 a~n~g~~~a~gd~i~flDa~ 157 (157)
+.-.|+.....+.++++.+|
T Consensus 122 al~~a~~~~~~~~~lv~~~D 141 (297)
T 2ux8_A 122 AVWCARDIVGDEPFAVLLPD 141 (297)
T ss_dssp HHHTTHHHHCSSCEEEECTT
T ss_pred HHHHHHHHcCCCcEEEEeCC
Confidence 98888887766777788776
No 28
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=74.54 E-value=17 Score=25.60 Aligned_cols=66 Identities=5% Similarity=0.095 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcC-CC-CCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 81 SALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRND-KR-EGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 81 ~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~-~n-~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
..|..+++.+.... .+|+|+-+... ... .. ..++++... .. .|...+...|++....++++++++|
T Consensus 34 pli~~~l~~l~~~~-----~~ivvv~~~~~----~~~-~~-~~~~~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~~~D 101 (201)
T 1e5k_A 34 PLWQHVADALMTQL-----SHVVVNANRHQ----EIY-QA-SGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCD 101 (201)
T ss_dssp EHHHHHHHHHHHHC-----SCEEEECSSSH----HHH-HT-TSCCEECCCTTCCCSHHHHHHHHHHHCCSSEEEEEETT
T ss_pred eHHHHHHHHHHhhC-----CEEEEEcCCcH----HHH-hh-cCCeEEecCCCCCCCHHHHHHHHHHhCCCCcEEEEeCC
Confidence 37888888877432 27877754321 122 22 345566543 22 5899999999999988999999887
No 29
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=74.24 E-value=11 Score=25.93 Aligned_cols=71 Identities=10% Similarity=0.038 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcC-CCCCHHHHHHHHHHHc--CCCEEEEEcCC
Q psy3172 81 SALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRND-KREGLMRSRVKGADAA--TAPVLTFLDSH 157 (157)
Q Consensus 81 ~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~-~n~G~~~a~n~g~~~a--~gd~i~flDa~ 157 (157)
..|..+++.+.... ..+|+|+-+.. ...+...+.. ..++++..+ ...|...+...|++.. ..++++++++|
T Consensus 32 pll~~~l~~l~~~~----~~~i~vv~~~~-~~~~~~~~~~-~~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D 105 (197)
T 2wee_A 32 TVLGATLDVARQAG----FDQLILTLGGA-ASAVRAAMAL-DGTDVVVVEDVERGCAASLRVALARVHPRATGIVLMLGD 105 (197)
T ss_dssp EHHHHHHHHHHHTT----CSEEEEEECTT-HHHHHHHSCC-TTSEEEECC----CCHHHHHHHHTTSCTTEEEEEEEETT
T ss_pred cHHHHHHHHHHhcC----CCcEEEEeCCC-HHHHHHHhcc-CCCEEEECCCcccCHHHHHHHHHHHhcccCCeEEEEeCC
Confidence 37888888876653 12777775432 2223232222 356666543 3357788888888877 46889999887
No 30
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=73.77 E-value=11 Score=25.98 Aligned_cols=71 Identities=13% Similarity=0.045 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcC-CCCCHHHHHHHHHHHc--CCCEEEEEcCC
Q psy3172 81 SALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRND-KREGLMRSRVKGADAA--TAPVLTFLDSH 157 (157)
Q Consensus 81 ~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~-~n~G~~~a~n~g~~~a--~gd~i~flDa~ 157 (157)
..|..+++.+.... ..+|+|+-+... ..+...+.. ..++++..+ ...|.+.+...|++.. ..++++++++|
T Consensus 32 pli~~~l~~l~~~~----~~~i~vv~~~~~-~~~~~~~~~-~~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D 105 (199)
T 2waw_A 32 TLLGATLAMARRCP----FDQLIVTLGGAA-DEVLEKVEL-DGLDIVLVDDAGLGCSSSLKSALTWVDPTAEGIVLMLGD 105 (199)
T ss_dssp EHHHHHHHHHHTSS----CSEEEEEECTTH-HHHHHHSCC-TTSEEEECCCCCTTCCCHHHHHHHTSCTTCSEEEEEETT
T ss_pred CHHHHHHHHHHhCC----CCcEEEEeCCCH-HHHHHHhcc-CCCEEEECCCcccCHHHHHHHHHHhhhccCCeEEEEeCC
Confidence 37777887776553 127877764322 223232222 346666533 3457677888888887 56899999887
No 31
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=69.57 E-value=13 Score=28.14 Aligned_cols=80 Identities=10% Similarity=0.179 Sum_probs=45.7
Q ss_pred EEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc----CCCEEEEEcCCCCCHHHHHHHHHHHcC
Q psy3172 72 IITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER----IEKVSVLRNDKREGLMRSRVKGADAAT 147 (157)
Q Consensus 72 IIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~----~~~v~vi~~~~n~G~~~a~n~g~~~a~ 147 (157)
++|.++.. .|...|..+.... ..+|+||-.+.....+...+.. ...+.++..+...|.+.+...|.....
T Consensus 27 llpi~gkp--li~~~l~~l~~~g----i~~I~vv~~~~~~~~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~~~i~ 100 (293)
T 1fxo_A 27 LLPVYDKP--MIYYPLSTLMLAG----IREILIISTPQDTPRFQQLLGDGSNWGLDLQYAVQPSPDGLAQAFLIGESFIG 100 (293)
T ss_dssp GSEETTEE--TTHHHHHHHHHTT----CCEEEEEECTTTHHHHHHHHTTSGGGTCEEEEEECSSCCCGGGHHHHTHHHHT
T ss_pred eCeECCEe--HHHHHHHHHHHCC----CCEEEEEeccccHHHHHHHHhcccccCceEEEeeCCCCCCHHHHHHHHHHHhC
Confidence 34556643 6777777766542 1288877644333334444432 123555666666788888888877765
Q ss_pred CCEEEEEcCC
Q psy3172 148 APVLTFLDSH 157 (157)
Q Consensus 148 gd~i~flDa~ 157 (157)
.+-++++.+|
T Consensus 101 ~~~~~lv~gD 110 (293)
T 1fxo_A 101 NDLSALVLGD 110 (293)
T ss_dssp TSEEEEEETT
T ss_pred CCCEEEEECC
Confidence 4544444355
No 32
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=69.51 E-value=24 Score=27.87 Aligned_cols=70 Identities=10% Similarity=0.032 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHcC-CCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGADAAT-APVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a~-gd~i~flDa~ 157 (157)
.|..+|+.+..... .+|+|+-+.. ...+...+... .++++..+...|.+.+...+++... .++++++++|
T Consensus 35 li~~~l~~l~~~~~----~~iivv~~~~-~~~i~~~~~~~-~~~~v~~~~~~g~~~~~~~~~~~~~~~~~vlv~~~D 105 (456)
T 2v0h_A 35 MVKHVIDTAHQLGS----ENIHLIYGHG-GDLMRTHLANE-QVNWVLQTEQLGTAHAVQQAAPFFKDNENIVVLYGD 105 (456)
T ss_dssp HHHHHHHHHHHTTC----SCEEEEECTT-HHHHHHHTTTC-CCEEEECSCCCCHHHHHHHHGGGCCTTSEEEEEETT
T ss_pred HHHHHHHHHHhCCC----CcEEEEeCCC-HHHHHHHhhcC-CcEEEeCCCCCCcHHHHHHHHHhcCCCCeEEEEcCC
Confidence 88888888876532 2676665432 12233333332 5777776667788888888888775 6899999887
No 33
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=69.16 E-value=28 Score=24.69 Aligned_cols=69 Identities=16% Similarity=0.174 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcC-----CCCCHHHHHHHHHHHcC--CCEEEEE
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRND-----KREGLMRSRVKGADAAT--APVLTFL 154 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~-----~n~G~~~a~n~g~~~a~--gd~i~fl 154 (157)
.|..+++.+..... ..+|+|+-+. +.+....... .++++..+ ...|...+...|++.+. .++++++
T Consensus 31 ll~~~l~~~~~~~~---~~~ivvv~~~---~~i~~~~~~~-~~~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~ 103 (228)
T 1ezi_A 31 LLGHTINAAISSKC---FDRIIVSTDG---GLIAEEAKNF-GVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTLL 103 (228)
T ss_dssp HHHHHHHHHHHHCC---CSEEEEEESC---HHHHHHHHHT-TCEEEECCC------CHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred HHHHHHHHHHhCCC---CCEEEEECCC---HHHHHHHHHc-CCEEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 78888888876642 1288888742 3333333332 44555443 23455667777777763 5789999
Q ss_pred cCC
Q psy3172 155 DSH 157 (157)
Q Consensus 155 Da~ 157 (157)
++|
T Consensus 104 ~~D 106 (228)
T 1ezi_A 104 QPT 106 (228)
T ss_dssp CTT
T ss_pred cCC
Confidence 887
No 34
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=68.76 E-value=25 Score=24.66 Aligned_cols=71 Identities=11% Similarity=0.037 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHc-CCCEEEEEcCC
Q psy3172 81 SALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGADAA-TAPVLTFLDSH 157 (157)
Q Consensus 81 ~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a-~gd~i~flDa~ 157 (157)
..|..+++.+..... ..+|+|+-+......+...+. ...+.++.. ..+.+.+...|++.. ..++++++++|
T Consensus 31 pli~~~l~~l~~~~~---~~~i~vv~~~~~~~~~~~~~~-~~~v~~~~~--~~~~~~~i~~al~~~~~~~~vlv~~~D 102 (223)
T 2xwl_A 31 PLLEHALSGLRASGV---IDRIVIAVPPALTDESKLVFG-GEDSVIVSG--GVDRTESVALALEAAGDAEFVLVHDAA 102 (223)
T ss_dssp EHHHHHHHHHHHHSC---CSEEEEEECGGGHHHHHHHTC-BTTEEEEEC--CSSHHHHHHHHHTTCTTCSEEEECCTT
T ss_pred EHHHHHHHHHhcCCC---CCeEEEEEcccHHHHHHHHhc-cCCeEEEcC--CCCHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 378888888776542 127777765322111222221 346766653 245677788888877 67899998886
No 35
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=68.71 E-value=28 Score=26.00 Aligned_cols=72 Identities=15% Similarity=0.137 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc--------------------------CCCEEEEEcCCCCC
Q psy3172 81 SALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER--------------------------IEKVSVLRNDKREG 134 (157)
Q Consensus 81 ~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~--------------------------~~~v~vi~~~~n~G 134 (157)
..|..+|+.+.... ..+|+||-+.. ...+...+.. ...+.++..+...|
T Consensus 40 pli~~~l~~l~~~g----i~~i~vv~~~~-~~~i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~G 114 (302)
T 2e3d_A 40 PLIQYVVNECIAAG----ITEIVLVTHSS-KNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGLAKG 114 (302)
T ss_dssp EHHHHHHHHHHHTT----CCEEEEEECGG-GHHHHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTCEEEEEECSSCCC
T ss_pred EHHHHHHHHHHHCC----CCEEEEEeCCC-HHHHHHHHhcchhhhhhhhhccchhhhhhhhhccccCcceEEeeCCccCC
Confidence 38888888887653 12777775432 2223333321 12355666667789
Q ss_pred HHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 135 LMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 135 ~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
.+.+.-.++.....+.++++.+|
T Consensus 115 t~~al~~a~~~~~~~~~lv~~~D 137 (302)
T 2e3d_A 115 LGHAVLCAHPVVGDEPVAVILPD 137 (302)
T ss_dssp HHHHHHHTHHHHCSSCEEEECTT
T ss_pred HHHHHHHHHHHcCCCcEEEEcCC
Confidence 99999888887765677777776
No 36
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=67.83 E-value=15 Score=29.18 Aligned_cols=70 Identities=9% Similarity=0.021 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHcC-CCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGADAAT-APVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a~-gd~i~flDa~ 157 (157)
.|..+|+.+..... .+|+|+-... ...+...+. ...++++..+...|.+.+...|++... .+.++++++|
T Consensus 38 li~~~l~~l~~~~~----~~i~vv~~~~-~~~i~~~~~-~~~~~~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~~D 108 (459)
T 4fce_A 38 MVQHVIDAAMKLGA----QHVHLVYGHG-GELLKKTLA-DPSLNWVLQAEQLGTGHAMQQAAPHFADDEDILMLYGD 108 (459)
T ss_dssp HHHHHHHHHHHHTC----SCEEEEESSC-HHHHHHHC------CEEECSSCCCHHHHHHHHGGGSCTTSEEEEEETT
T ss_pred HHHHHHHHHHhCCC----CcEEEEeCCC-HHHHHHHhc-cCCcEEEeCCCCCCcHHHHHHHHHhcCCCCcEEEEeCC
Confidence 88888888877642 2777765432 223333332 235677777777899999998988886 4899999987
No 37
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=67.02 E-value=24 Score=25.00 Aligned_cols=65 Identities=14% Similarity=0.103 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCC--CCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDK--REGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~--n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
.|..+++.+... . - +|+|+-+. ..+...+... +.++..++ ..|.+.+. .+++....++++++++|
T Consensus 29 li~~~l~~~~~~-~--~--~i~v~~~~---~~i~~~~~~~--~~~~~~~~~~~~g~~~~~-~~~~~~~~~~vlv~~~D 95 (234)
T 2y6p_A 29 LIRWVVEGLVKT-G--E--RVILATDS---ERVKEVVEDL--CEVFLTPSDLPSGSDRVL-YVVRDLDVDLIINYQGD 95 (234)
T ss_dssp HHHHHHHHHHTT-T--S--CEEEEESC---HHHHHHHTTT--SEEEECCTTCCSHHHHHH-HHHTTCCCSEEEECCTT
T ss_pred HHHHHHHHHHHh-C--C--EEEEECCh---HHHHHHHHhc--eEEEECCcccccchHHHH-HHHHhCCCCEEEEecCC
Confidence 788888887665 2 2 77776543 3343444333 55554322 45666665 46666677899999886
No 38
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=65.49 E-value=19 Score=28.72 Aligned_cols=69 Identities=9% Similarity=-0.012 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHcC--CCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGADAAT--APVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a~--gd~i~flDa~ 157 (157)
.|..+|+.+.... ..+|+|+-... ...+...+.. .+.++..+...|.+.+.-.|++... .+.++++++|
T Consensus 41 li~~~l~~l~~~g----~~~iivv~~~~-~~~i~~~~~~--~i~~v~~~~~~G~~~sl~~a~~~~~~~~~~vlv~~~D 111 (468)
T 1hm9_A 41 MLEHVFRSVGAIQ----PEKTVTVVGHK-AELVEEVLAG--QTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLVIAGD 111 (468)
T ss_dssp HHHHHHHHHHTTC----CSEEEEEECTT-HHHHHHSSSS--SSEEEECSSCCCHHHHHHTTHHHHTTCCSEEEEEETT
T ss_pred HHHHHHHHHHhcC----CCCEEEEECCC-HHHHHHHhCC--CcEEEeCCccCChHHHHHHHHHHhccCCCeEEEEeCC
Confidence 7888888876653 22777775432 1222222222 5777776667799998888888775 5889999887
No 39
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=65.13 E-value=28 Score=25.65 Aligned_cols=78 Identities=10% Similarity=0.114 Sum_probs=49.3
Q ss_pred EEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc-------------------------CCCEEEE
Q psy3172 73 ITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER-------------------------IEKVSVL 127 (157)
Q Consensus 73 Ip~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~-------------------------~~~v~vi 127 (157)
+|.-+. ..|...|+.+..... .+|+|+-.. ....+...+.. ...+.++
T Consensus 28 l~i~gk--pli~~~l~~l~~~gi----~~i~vv~~~-~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 100 (281)
T 3juk_A 28 LPIVDK--PLIQYAVEEAMEAGC----EVMAIVTGR-NKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEKCCFSYV 100 (281)
T ss_dssp CBSSSS--BHHHHHHHHHHHHTC----CEEEEEECT-THHHHHHHTSCCC--------CCHHHHHHHHHHHHHHCEEEEE
T ss_pred ceECCE--EHHHHHHHHHHhCCC----CEEEEEecC-CHHHHHHHHhcchhhhhhhhcccchhhhhhhhccccCccEEEE
Confidence 344444 388888888877632 277777642 22333333322 1345566
Q ss_pred EcCCCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 128 RNDKREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 128 ~~~~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
..+...|.+.+...|+.....+.++++.+|
T Consensus 101 ~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D 130 (281)
T 3juk_A 101 RQKQMKGLGHAILTGEALIGNEPFAVILAD 130 (281)
T ss_dssp ECSSCCCHHHHHHHTHHHHCSSCEEEECTT
T ss_pred ecCCCCCcHHHHHHHHHHcCCCCEEEEeCC
Confidence 666778999999888888766677777765
No 40
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=63.80 E-value=35 Score=24.76 Aligned_cols=73 Identities=5% Similarity=0.092 Sum_probs=43.5
Q ss_pred CCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHcC----CCEEE
Q psy3172 77 NEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGADAAT----APVLT 152 (157)
Q Consensus 77 n~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a~----gd~i~ 152 (157)
+.. ..|..+++.+..... ..+|+||-+......+...+.. .+.++.. ..+...+.-.|++.+. .++++
T Consensus 33 ~Gk-pll~~~l~~~~~~~~---~~~ivVv~~~~~~~~~~~~~~~--~v~~v~g--g~~r~~sv~~gl~~~~~~~~~d~Vl 104 (231)
T 3q80_A 33 DGQ-TLIERAVDGLLDSGV---VDTVVVAVPADRTDEARQILGH--RAMIVAG--GSNRTDTVNLALTVLSGTAEPEFVL 104 (231)
T ss_dssp TTE-EHHHHHHHHHHHTSC---CCEEEEEECGGGHHHHHHHHGG--GCEEEEC--CSSHHHHHHHHHGGGC---CCSEEE
T ss_pred CCe-EHHHHHHHHHHhCCC---CCeEEEECChHHHHHHHHHhcC--CeEEEcC--CCchHHHHHHHHHHhhhcCCCCEEE
Confidence 344 388888888766432 2288887654321223333332 5666653 2244566677887775 48999
Q ss_pred EEcCC
Q psy3172 153 FLDSH 157 (157)
Q Consensus 153 flDa~ 157 (157)
++|+|
T Consensus 105 v~~~d 109 (231)
T 3q80_A 105 VHDAA 109 (231)
T ss_dssp ECCTT
T ss_pred EEcCC
Confidence 99987
No 41
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=63.76 E-value=18 Score=25.93 Aligned_cols=60 Identities=10% Similarity=0.158 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
.|..+++.+.... . +|+|+-. . +.+ .....+++ ....|.+.+...|++... +.++++++|
T Consensus 34 ll~~~l~~l~~~~---~--~ivvv~~--~-~~i----~~~~~~~~---~~~~g~~~~i~~a~~~~~-~~~lv~~~D 93 (232)
T 2dpw_A 34 MVEWVLEALYAAG---L--SPVYVGE--N-PGL----VPAPALTL---PDRGGLLENLEQALEHVE-GRVLVATGD 93 (232)
T ss_dssp THHHHHHHHHHTT---C--EEEEESC--C-SSC----SSCCSEEE---CCCSSHHHHHHHHHHTCC-SEEEEEETT
T ss_pred HHHHHHHHHHhcC---C--EEEEEeC--h-HHH----hhhcCeEe---cCCCCHHHHHHHHHHHcC-CCEEEEeCC
Confidence 7777888776653 2 8888733 2 221 11115555 456789999999998877 888888887
No 42
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=61.84 E-value=34 Score=25.77 Aligned_cols=79 Identities=15% Similarity=0.051 Sum_probs=46.4
Q ss_pred EEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc-C--CCEEEEEcCCCCCHHHHHHHHHHHcC-C
Q psy3172 73 ITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER-I--EKVSVLRNDKREGLMRSRVKGADAAT-A 148 (157)
Q Consensus 73 Ip~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~-~--~~v~vi~~~~n~G~~~a~n~g~~~a~-g 148 (157)
+|..+.. ..|..+++.+... . - +|+|+-+......+.+.+.. . +.+.++..+...|.+.+...++.... .
T Consensus 31 l~i~gg~-pli~~~l~~l~~~-~--~--~i~vv~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~~gt~~al~~a~~~l~~~ 104 (308)
T 2qh5_A 31 LKLFDHK-SLFELSFKRNASL-V--D--ETLIVCNEKHYFLALEEIKNEIKNKSVGFLLESLSKNTANAIALSALMSDKE 104 (308)
T ss_dssp CTTBTTB-CHHHHHHHHHHTT-C--S--EEEEEEEGGGHHHHHHHTTTTCSSCEEEEEEESSCCCHHHHHHHHHHTSCTT
T ss_pred EECCCCC-CHHHHHHHHHHcc-C--C--CEEEEEChhHHHHHHHHHHHhhCCCccEEEeCCCCCChHHHHHHHHHHhCCC
Confidence 3443334 3777778777665 2 2 77766543221223344433 2 24556666667789888888887765 4
Q ss_pred CEEEEEcCC
Q psy3172 149 PVLTFLDSH 157 (157)
Q Consensus 149 d~i~flDa~ 157 (157)
++++++.+|
T Consensus 105 ~~~lv~~~D 113 (308)
T 2qh5_A 105 DLLIVTPSD 113 (308)
T ss_dssp SEEEEEESS
T ss_pred CeEEEEcCC
Confidence 467777765
No 43
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=58.90 E-value=54 Score=24.45 Aligned_cols=89 Identities=16% Similarity=0.233 Sum_probs=49.5
Q ss_pred CcEEEEEEecCCchHHHHHHHHHHHhhCCC-CCccEEEEEeCCCCCchH---HHHHhcC-CCEEEEEcCCCC--------
Q psy3172 67 PATSVIITFHNEARSALLRSVVSIINRTPA-HLLKEIILVDDFSDDPSD---GEELERI-EKVSVLRNDKRE-------- 133 (157)
Q Consensus 67 p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~-~~~~eIivvddgS~d~t~---~~~~~~~-~~v~vi~~~~n~-------- 133 (157)
..+-|++.+=+.-...+.-++.|++..+.. ++ .+.|+.++-+.... ....... ..++++..+...
T Consensus 4 m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~~~~--~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (276)
T 3tzt_A 4 MADALLLTLDENYIPQMKVLMTSIYINNPGRIF--DVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFAKVTD 81 (276)
T ss_dssp -CEEEEEECCGGGHHHHHHHHHHHHHHSTTCCE--EEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC-----------
T ss_pred eeEEEEEEeCHhHHHHHHHHHHHHHHhCCCCce--EEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcCcccc
Confidence 356777655322224788889999988753 44 88888887665442 2232222 245665543311
Q ss_pred --C-HHHHHHHHHHHc--CCCEEEEEcCC
Q psy3172 134 --G-LMRSRVKGADAA--TAPVLTFLDSH 157 (157)
Q Consensus 134 --G-~~~a~n~g~~~a--~gd~i~flDa~ 157 (157)
. ...+|-...... .-+-+++||+|
T Consensus 82 ~~s~~~~~rl~~~~l~p~~~~kvlylD~D 110 (276)
T 3tzt_A 82 RYPKEMYYRLLAGEFLPENLGEILYLDPD 110 (276)
T ss_dssp --CHHHHHHHTHHHHSCTTCCEEEEECSS
T ss_pred ccCHHHHHHHHHHHHcccccCeEEEEeCC
Confidence 1 122333333444 35889999998
No 44
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=58.85 E-value=34 Score=24.76 Aligned_cols=72 Identities=11% Similarity=0.184 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc---CCCEEEEEcCCCCCHHHHHHHHHHHcC-------CCE
Q psy3172 81 SALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER---IEKVSVLRNDKREGLMRSRVKGADAAT-------APV 150 (157)
Q Consensus 81 ~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~---~~~v~vi~~~~n~G~~~a~n~g~~~a~-------gd~ 150 (157)
..|..+|+.+..... ..+|+||-+..........+.. ...+.++.. ..+...+.-.|++... .++
T Consensus 33 pll~~~l~~~~~~~~---~~~ivvv~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~sv~~al~~l~~~~~~~~~~~ 107 (246)
T 3f1c_A 33 PIIVHTVEKFILNTR---FDKILISSPKEWMNHAEDNIKKYISDDRIVVIEG--GEDRNETIMNGIRFVEKTYGLTDDDI 107 (246)
T ss_dssp EHHHHHHHHHHTCTT---CSEEEEEECGGGHHHHHHHHHHHCCCTTEEEEEC--CSSHHHHHHHHHHHHHHHTCCCTTCE
T ss_pred eHHHHHHHHHHcCCC---CCEEEEEeCHHHHHHHHHHHHHhCCCCCEEEECC--CCchHHHHHHHHHHHhhhhcCCCCCE
Confidence 378888888765532 2288877654322122233322 235666653 2356666666776653 589
Q ss_pred EEEEcCC
Q psy3172 151 LTFLDSH 157 (157)
Q Consensus 151 i~flDa~ 157 (157)
++++|+|
T Consensus 108 vlv~~~d 114 (246)
T 3f1c_A 108 IVTHDAV 114 (246)
T ss_dssp EEEEETT
T ss_pred EEEecCc
Confidence 9999986
No 45
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=58.08 E-value=25 Score=26.60 Aligned_cols=79 Identities=11% Similarity=0.186 Sum_probs=44.5
Q ss_pred EEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc----CCCEEEEEcCCCCCHHHHHHHHHHHcC
Q psy3172 72 IITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER----IEKVSVLRNDKREGLMRSRVKGADAAT 147 (157)
Q Consensus 72 IIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~----~~~v~vi~~~~n~G~~~a~n~g~~~a~ 147 (157)
++|.++.. .|...|..+.... ..+|+||-.......+...+.. ...+.++..+...|.+.+.-.|+....
T Consensus 28 llpi~gkp--li~~~l~~l~~~g----i~~I~vv~~~~~~~~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~~~i~ 101 (296)
T 1mc3_A 28 LLPIYDKP--MIYYPLSVLMLAG----IREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLN 101 (296)
T ss_dssp GSEETTEE--TTHHHHHHHHHTT----CCEEEEEECTTTHHHHHHHHTTSGGGTCEEEEEECSSCCCSTHHHHHTHHHHT
T ss_pred eeEECCee--HHHHHHHHHHhCC----CCcEEEEechhHHHHHHHHHhcccccCceEEEeccCCCCCHHHHHHHHHHHhC
Confidence 34556542 6777777776532 2288887643332334444432 123555655566788888877877665
Q ss_pred C-CEEEEEcCC
Q psy3172 148 A-PVLTFLDSH 157 (157)
Q Consensus 148 g-d~i~flDa~ 157 (157)
. ++++++ +|
T Consensus 102 ~~~~~lv~-gD 111 (296)
T 1mc3_A 102 GEPSCLVL-GD 111 (296)
T ss_dssp TSCEEEEE-TT
T ss_pred CCCEEEEE-CC
Confidence 3 455444 54
No 46
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=57.46 E-value=25 Score=26.58 Aligned_cols=79 Identities=13% Similarity=0.213 Sum_probs=44.2
Q ss_pred EEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc----CCCEEEEEcCCCCCHHHHHHHHHHHcC
Q psy3172 72 IITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER----IEKVSVLRNDKREGLMRSRVKGADAAT 147 (157)
Q Consensus 72 IIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~----~~~v~vi~~~~n~G~~~a~n~g~~~a~ 147 (157)
++|.++.. .|...|..+.... ..+|+||-.......+...+.. ...+.++..+...|.+.+.-.|+....
T Consensus 28 llpi~gkp--li~~~l~~l~~~g----i~~Iivv~~~~~~~~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~~~i~ 101 (295)
T 1lvw_A 28 LLPIYDKP--MIYYPLSVLMLAG----IRDILIISTPRDLPLYRDLLGDGSQFGVRFSYRVQEEPRGIADAFIVGKDFIG 101 (295)
T ss_dssp GSEETTEE--TTHHHHHHHHHTT----CCEEEEEECTTTHHHHHHHHTTSGGGTSEEEEEECSSCCCGGGHHHHTHHHHT
T ss_pred ecEECCee--HHHHHHHHHHHCC----CCeEEEEeccchHHHHHHHhhhccccCceEEEeeCCCCCChHHHHHHHHHHhC
Confidence 34566643 6777777766542 2288877543222334344432 123555655566788888877777664
Q ss_pred -CCEEEEEcCC
Q psy3172 148 -APVLTFLDSH 157 (157)
Q Consensus 148 -gd~i~flDa~ 157 (157)
.++++++ +|
T Consensus 102 ~~~~~lv~-gD 111 (295)
T 1lvw_A 102 DSKVALVL-GD 111 (295)
T ss_dssp TSCEEEEE-TT
T ss_pred CCcEEEEE-CC
Confidence 3455544 54
No 47
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=57.39 E-value=36 Score=24.23 Aligned_cols=68 Identities=7% Similarity=-0.010 Sum_probs=41.9
Q ss_pred CCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEc-CCCCCHHHHHHHHHHHcCCCEEEEEc
Q psy3172 77 NEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRN-DKREGLMRSRVKGADAATAPVLTFLD 155 (157)
Q Consensus 77 n~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~-~~n~G~~~a~n~g~~~a~gd~i~flD 155 (157)
+.. ..+..+++.+... +|+||-+. .... ..+.....++++.. ....|...+.-.|++.+ .+++ ++.
T Consensus 24 ~G~-pli~~~~~~l~~~-------~vvvv~~~--~~~~-~~~~~~~~~~~v~d~~~~~G~~~si~~gl~~~-~~~v-v~~ 90 (208)
T 3ngw_A 24 CGK-KLIEWVLEKYSPF-------QTVFVCRD--EKQA-EKLSSRYEAEFIWDLHKGVGSIAGIHAALRHF-GSCV-VAA 90 (208)
T ss_dssp TTE-EHHHHHHHHHTTS-------EEEEECSS--HHHH-HHHHTTSCSCEECCTTCCCSHHHHHHHHHHHH-SSEE-EEE
T ss_pred CCe-eHHHHHHHHhcCC-------CEEEEECC--HHHH-HHHHHhcCCeEEecCCCCCChHHHHHHHHHHc-CCCE-EEE
Confidence 444 3777777766433 77777532 1222 23333234556643 23457888999999988 8999 988
Q ss_pred CC
Q psy3172 156 SH 157 (157)
Q Consensus 156 a~ 157 (157)
+|
T Consensus 91 ~D 92 (208)
T 3ngw_A 91 ID 92 (208)
T ss_dssp TT
T ss_pred CC
Confidence 86
No 48
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=57.23 E-value=14 Score=25.84 Aligned_cols=34 Identities=18% Similarity=0.126 Sum_probs=25.1
Q ss_pred CEEEEEcCC-CCCHHHHHHHHHHHcCC-CEEEEEcCC
Q psy3172 123 KVSVLRNDK-REGLMRSRVKGADAATA-PVLTFLDSH 157 (157)
Q Consensus 123 ~v~vi~~~~-n~G~~~a~n~g~~~a~g-d~i~flDa~ 157 (157)
.+ ++..+. ..|...+...|++.+.. ++++++++|
T Consensus 61 ~~-~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D 96 (197)
T 3d5n_A 61 QI-VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGD 96 (197)
T ss_dssp SC-EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETT
T ss_pred CE-EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCC
Confidence 45 555432 35888888889988865 799999887
No 49
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=57.13 E-value=67 Score=25.92 Aligned_cols=78 Identities=15% Similarity=0.150 Sum_probs=51.6
Q ss_pred EEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHh-----cCCCEEEEEcCCCCCHHHHHHHHHHHc
Q psy3172 72 IITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELE-----RIEKVSVLRNDKREGLMRSRVKGADAA 146 (157)
Q Consensus 72 IIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~-----~~~~v~vi~~~~n~G~~~a~n~g~~~a 146 (157)
++|..+.. .|...|+.+..... .+|+||-.. ..+.+...+. ....++++..++..|.+.|...++...
T Consensus 34 l~pv~gkp--~i~~~l~~~~~~g~----~~i~vv~~~-~~~~i~~~~~~~~~~~~~~i~~~~q~~~lGTa~Av~~a~~~l 106 (501)
T 3st8_A 34 LHTLAGRS--MLSHVLHAIAKLAP----QRLIVVLGH-DHQRIAPLVGELADTLGRTIDVALQDRPLGTGHAVLCGLSAL 106 (501)
T ss_dssp GCEETTEE--HHHHHHHHHHHHCC----SEEEEEECT-THHHHHHHHHHHHHHHTSCCEEEECSSCCCHHHHHHHHHTTS
T ss_pred HeEECChh--HHHHHHHHHHhCCC----CEEEEEeCC-CHHHHHHHHHHHHHhcCCcEEEEEcCCCCCcHHHHHHHHHHh
Confidence 56777754 78888888877653 288877643 2233434333 245788888888899999999998877
Q ss_pred CCC---EEEEEcC
Q psy3172 147 TAP---VLTFLDS 156 (157)
Q Consensus 147 ~gd---~i~flDa 156 (157)
..+ .++++.+
T Consensus 107 ~~~~~~~~lvl~g 119 (501)
T 3st8_A 107 PDDYAGNVVVTSG 119 (501)
T ss_dssp CTTCCSEEEEEET
T ss_pred ccccccceeeecC
Confidence 543 4455443
No 50
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=54.78 E-value=52 Score=23.09 Aligned_cols=70 Identities=7% Similarity=-0.001 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc--CCCEEEEEcCCCCCHHHHHHHHHHHc-------CCCEE
Q psy3172 81 SALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER--IEKVSVLRNDKREGLMRSRVKGADAA-------TAPVL 151 (157)
Q Consensus 81 ~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~--~~~v~vi~~~~n~G~~~a~n~g~~~a-------~gd~i 151 (157)
..|..+++.+..... ..+|+|+-+...+ .+.. +.. ...+.++ ....|.+.+.-.|+..+ ..+.+
T Consensus 35 pli~~~l~~l~~~~~---~~~ivvv~~~~~~-~~~~-~~~~~~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~v 107 (231)
T 1vgw_A 35 TVLEHVLGIFERHEA---VDLTVVVVSPEDT-FADK-VQTAFPQVRVWK--NGGQTRAETVRNGVAKLLETGLAAETDNI 107 (231)
T ss_dssp EHHHHHHHHHHTCTT---CCEEEEECCTTCS-THHH-HHHHCTTSEEEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEE
T ss_pred EHHHHHHHHHHcCCC---CCeEEEEECccHH-HHHH-HHhcCCCceEEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEE
Confidence 378888887765432 1278777643332 3333 322 2356554 34567888888887765 46899
Q ss_pred EEEcCC
Q psy3172 152 TFLDSH 157 (157)
Q Consensus 152 ~flDa~ 157 (157)
+++++|
T Consensus 108 lv~~~D 113 (231)
T 1vgw_A 108 LVHDAA 113 (231)
T ss_dssp EECCTT
T ss_pred EEEcCC
Confidence 999886
No 51
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=54.04 E-value=56 Score=24.65 Aligned_cols=74 Identities=11% Similarity=0.119 Sum_probs=42.3
Q ss_pred HHHHHHHHH-HhhCCCCCccEEEEEeCCCCCchHH---HHHhc-CCCEEEEEcCCC--------CC----HHHHHHHHHH
Q psy3172 82 ALLRSVVSI-INRTPAHLLKEIILVDDFSDDPSDG---EELER-IEKVSVLRNDKR--------EG----LMRSRVKGAD 144 (157)
Q Consensus 82 ~l~~~l~sl-~~q~~~~~~~eIivvddgS~d~t~~---~~~~~-~~~v~vi~~~~n--------~G----~~~a~n~g~~ 144 (157)
.+.-++.|+ +..+..++ .++|+.++-++.... ..... ...++++..+.. .+ ...+|-....
T Consensus 14 ~~~vli~Sl~l~~~~~~~--~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~ 91 (311)
T 1g9r_A 14 YLCVAAKSVEAAHPDTEI--RFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGE 91 (311)
T ss_dssp HHHHHHHHHHHTCTTSCC--EEEEEESSCCHHHHHHHHHHSGGGTTTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHH
T ss_pred HHHHHHHHHHHHcCCCCc--eEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEcCHHHHhcCccccccCCHHHHHHHHHHH
Confidence 677788899 77765556 888888775554422 22222 345666653221 11 1223333333
Q ss_pred Hc-CCCEEEEEcCC
Q psy3172 145 AA-TAPVLTFLDSH 157 (157)
Q Consensus 145 ~a-~gd~i~flDa~ 157 (157)
.. .-+-+++||||
T Consensus 92 ll~~~~kvlyLD~D 105 (311)
T 1g9r_A 92 YIADCDKVLYLDID 105 (311)
T ss_dssp HCCSCSCEEEECSS
T ss_pred HhhhcCEEEEEcCC
Confidence 33 45789999998
No 52
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=52.96 E-value=58 Score=23.08 Aligned_cols=69 Identities=6% Similarity=0.051 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcC-----CCCCHHHHHHHHHHHc-CCCEEEEEc
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRND-----KREGLMRSRVKGADAA-TAPVLTFLD 155 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~-----~n~G~~~a~n~g~~~a-~gd~i~flD 155 (157)
.|..+++.+..... ..+|+|+-+ ++.+....... +++++..+ ...+...+...|++.+ ..+++++++
T Consensus 30 li~~~i~~~~~~~~---~~~ivv~~~---~~~i~~~~~~~-g~~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~ 102 (229)
T 1qwj_A 30 LIGWVLRAALDAGV---FQSVWVSTD---HDEIENVAKQF-GAQVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQ 102 (229)
T ss_dssp HHHHHHHHHHHHTC---CSEEEEEES---CHHHHHHHHHT-TCEEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEEC
T ss_pred HHHHHHHHHHhCCC---cCEEEEECC---hHHHHHHHHHc-CCEEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEec
Confidence 78888888776642 128888763 23343443333 45665543 2234445666677766 578999998
Q ss_pred CC
Q psy3172 156 SH 157 (157)
Q Consensus 156 a~ 157 (157)
+|
T Consensus 103 ~D 104 (229)
T 1qwj_A 103 AT 104 (229)
T ss_dssp TT
T ss_pred CC
Confidence 86
No 53
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=51.35 E-value=59 Score=25.04 Aligned_cols=14 Identities=14% Similarity=0.261 Sum_probs=10.8
Q ss_pred HHcCCCEEEEEcCC
Q psy3172 144 DAATAPVLTFLDSH 157 (157)
Q Consensus 144 ~~a~gd~i~flDa~ 157 (157)
.....+-+++||||
T Consensus 91 ~l~~ydrvlYLDaD 104 (333)
T 1ll2_A 91 SLTQYSKCVFMDAD 104 (333)
T ss_dssp GCTTCSEEEEECTT
T ss_pred HhcCCCeEEEEeCC
Confidence 33456889999998
No 54
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=49.09 E-value=68 Score=22.74 Aligned_cols=68 Identities=10% Similarity=0.098 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcC--CCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRND--KREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~--~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
.|..+++.+..... ..+|+|+-+. +.+...+... +++++..+ ...|.+.+. .|++....+.++++++|
T Consensus 29 li~~~i~~~~~~~~---~~~ivvv~~~---~~i~~~~~~~-~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv~~~D 98 (245)
T 1h7e_A 29 MIQHVYERALQVAG---VAEVWVATDD---PRVEQAVQAF-GGKAIMTRNDHESGTDRLV-EVMHKVEADIYINLQGD 98 (245)
T ss_dssp HHHHHHHHHHTCTT---CCEEEEEESC---HHHHHHHHHT-TCEEEECCSCCSSHHHHHH-HHHHHSCCSEEEECCTT
T ss_pred HHHHHHHHHHhCCC---CCeEEEECCc---HHHHHHHHHc-CCeEEeCCCccCCcHHHHH-HHHHhCCCCEEEEEcCC
Confidence 77778887765532 1288887643 3333333333 56666642 334565554 46666677899999887
No 55
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=48.60 E-value=35 Score=26.90 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
.|..+++.+..... ..+|+|+-+ . .. ........++++. ...|...+...|++....++++++++|
T Consensus 33 Li~~~l~~l~~~~~---~~~IvVvt~--~-~~--~i~~~~~~v~~v~--~g~g~~~sv~~aL~~l~~d~vlv~~~D 98 (371)
T 1w55_A 33 LWLYATKNLSSFYP---FKKIVVTSS--N-IT--YMKKFTKNYEFIE--GGDTRAESLKKALELIDSEFVMVSDVA 98 (371)
T ss_dssp HHHHHHHHHHTTSC---CSCEEEEES--C-HH--HHHTTCSSSEEEE--CCSSHHHHHHHHHTTCCSSEEEEEETT
T ss_pred HHHHHHHHHHccCC---CCeEEEEcC--C-HH--HHHHHhCCCEEEe--CCCChHHHHHHHHHhcCCCeEEEEeCC
Confidence 78888887765322 127888765 2 21 1122222366663 235677888888888778999999987
No 56
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=47.77 E-value=47 Score=23.53 Aligned_cols=68 Identities=16% Similarity=0.174 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHH-HhcC-CCEEEEEcCCC-CCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEE-LERI-EKVSVLRNDKR-EGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~-~~~~-~~v~vi~~~~n-~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
.|..+++.+... . .+|+|+- . ....+... .... ..++++..+.. .|.+.+...|++....++ +++.+|
T Consensus 47 li~~~l~~l~~~-~----~~i~vv~-~-~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~i~~a~~~~~~~~-lv~~~D 117 (232)
T 2xme_A 47 IILRTMKLLSPH-V----SEFIIVA-S-RYADDIDAFLKDKGFNYKIVRHDRPEKGNGYSLLVAKNHVEDRF-ILTMGD 117 (232)
T ss_dssp HHHHHHHHHGGG-E----EEEEEEE-S-TTHHHHHHHHTTSCCCEEEEECSCGGGCHHHHHHTTGGGCCSSE-EEEETT
T ss_pred HHHHHHHHHHHh-C----CEEEEEe-C-ChHHHHHHHHHhcCCcEEEEECCCCCCCcHHHHHHHHHHCCCCE-EEEcCC
Confidence 777777776554 2 2777776 3 22333233 2322 35777775443 688888888888776554 456554
No 57
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=46.12 E-value=76 Score=22.42 Aligned_cols=69 Identities=19% Similarity=0.215 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcC--CCEEEEEcCCCCCHHHHHHHHHHHcC-CCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERI--EKVSVLRNDKREGLMRSRVKGADAAT-APVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~--~~v~vi~~~~n~G~~~a~n~g~~~a~-gd~i~flDa~ 157 (157)
.|..+++.+..... ..+|+|+-+...+. +.. +... ..++++.. ..|...+...|++.+. .++++++++|
T Consensus 37 ll~~~i~~l~~~~~---~~~ivvv~~~~~~~-~~~-~~~~~~~~v~~~~~--~~g~~~~i~~al~~~~~~~~~lv~~~D 108 (236)
T 1i52_A 37 ILEHSVHALLAHPR---VKRVVIAISPGDSR-FAQ-LPLANHPQITVVDG--GDERADSVLAGLKAAGDAQWVLVHDAA 108 (236)
T ss_dssp HHHHHHHHHHTSTT---EEEEEEEECTTCCS-GGG-SGGGGCTTEEEEEC--CSSHHHHHHHHHHTSTTCSEEEECCTT
T ss_pred HHHHHHHHHHhCCC---CCeEEEEeCccHHH-HHH-HHhcCCCCEEEECC--CCCHHHHHHHHHHhcCCCCEEEEEcCc
Confidence 77777777765431 22777776543322 212 2222 35666543 3578888888888874 6899999886
No 58
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=45.49 E-value=29 Score=26.76 Aligned_cols=81 Identities=11% Similarity=0.174 Sum_probs=44.0
Q ss_pred EEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHcC-CCEE
Q psy3172 73 ITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGADAAT-APVL 151 (157)
Q Consensus 73 Ip~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a~-gd~i 151 (157)
+|..+.. ..|..+++.+..... ..+|+|+-+......+.+.+.......++..+...|.+.+.-.++.... .+++
T Consensus 28 l~l~g~~-pli~~~l~~l~~~~~---~~~iivvt~~~~~~~i~~~l~~~~~~~ii~e~~~~gta~ai~~a~~~~~~~~~~ 103 (336)
T 2x65_A 28 LKLFGNK-SLMRWTFERVLEEMD---PKDVIVVTHKDYVERTKKELPELPDENIIAEPMKKNTAPACFIGTKLADDDEPV 103 (336)
T ss_dssp CCCBTTB-CHHHHHHHHHHTTCC---GGGEEEEEEGGGHHHHHHHCTTSCGGGEEEESSCCCHHHHHHHHHTTSCTTCEE
T ss_pred EECCCCC-cHHHHHHHHHhccCC---CCcEEEEcChHHHHHHHHHhhccccceEEeCCCCCCcHHHHHHHHHhhCCCCEE
Confidence 3444534 378888887766422 1266666543211222233333222344555566788887776665443 4677
Q ss_pred EEEcCC
Q psy3172 152 TFLDSH 157 (157)
Q Consensus 152 ~flDa~ 157 (157)
+++.+|
T Consensus 104 lvl~~D 109 (336)
T 2x65_A 104 LVLPAD 109 (336)
T ss_dssp EEEETT
T ss_pred EEEcCC
Confidence 777765
No 59
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=36.76 E-value=1.2e+02 Score=22.17 Aligned_cols=67 Identities=19% Similarity=0.227 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEc--CCCCCHHHHHHHHHHHc---CCCEEEEEcC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRN--DKREGLMRSRVKGADAA---TAPVLTFLDS 156 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~--~~n~G~~~a~n~g~~~a---~gd~i~flDa 156 (157)
.|...++.+.... ..+|+|+-+ ++.+...+..+ +++++.. ....|.+. ...+++.. ..++++++++
T Consensus 36 li~~~l~~l~~~~----i~~VvVvt~---~~~i~~~~~~~-g~~v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~g 106 (256)
T 3tqd_A 36 MIQHVYESAIKSG----AEEVVIATD---DKRIRQVAEDF-GAVVCMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQG 106 (256)
T ss_dssp HHHHHHHHHHHTT----CSEEEEEES---CHHHHHHHHHT-TCEEEECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECT
T ss_pred HHHHHHHHHHhCC----CCEEEEECC---HHHHHHHHHHc-CCeEEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeC
Confidence 7777777776642 238888754 24444444433 4455432 33445555 44466665 5689999998
Q ss_pred C
Q psy3172 157 H 157 (157)
Q Consensus 157 ~ 157 (157)
|
T Consensus 107 D 107 (256)
T 3tqd_A 107 D 107 (256)
T ss_dssp T
T ss_pred C
Confidence 7
No 60
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=36.60 E-value=1.2e+02 Score=22.10 Aligned_cols=67 Identities=16% Similarity=0.152 Sum_probs=37.5
Q ss_pred HHHHHH-HHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEE--cCCCCCHHHHHHHHHHHc---CCCEEEEEc
Q psy3172 82 ALLRSV-VSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLR--NDKREGLMRSRVKGADAA---TAPVLTFLD 155 (157)
Q Consensus 82 ~l~~~l-~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~--~~~n~G~~~a~n~g~~~a---~gd~i~flD 155 (157)
.|..++ +.+.... ..+|+|+-+ ++.+.+....+ +++++. .....|.. +...|++.. ..+++++++
T Consensus 28 li~~~i~~~~~~~~----~~~vvVvt~---~~~i~~~~~~~-g~~v~~~~~~~~~Gt~-~i~~a~~~~~~~~~d~vlv~~ 98 (253)
T 4fcu_A 28 MILRVVDQAKKVEG----FDDLCVATD---DERIAEICRAE-GVDVVLTSADHPSGTD-RLSEVARIKGWDADDIIVNVQ 98 (253)
T ss_dssp HHHHHHHHHHTCTT----CCEEEEEES---CHHHHHHHHTT-TCCEEECCTTCCCHHH-HHHHHHHHHTCCTTCEEEECC
T ss_pred hHHHHHHHHHHhcC----CCEEEEECC---HHHHHHHHHHc-CCeEEEeCCCCCChHH-HHHHHHHhcCcCCCCEEEEEe
Confidence 777777 7665432 238888864 24343444332 344443 22333443 444566555 358999999
Q ss_pred CC
Q psy3172 156 SH 157 (157)
Q Consensus 156 a~ 157 (157)
+|
T Consensus 99 gD 100 (253)
T 4fcu_A 99 GD 100 (253)
T ss_dssp TT
T ss_pred CC
Confidence 87
No 61
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=35.66 E-value=1.1e+02 Score=21.30 Aligned_cols=33 Identities=12% Similarity=0.115 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 122 EKVSVLRNDKREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 122 ~~v~vi~~~~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
..++++..+ .|.+.++..|++.. .+.++++-+|
T Consensus 65 ~~~~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D 97 (211)
T 2i5e_A 65 TEARVLLDE--KDLNEALNRYLKEA-EEPVLIVMAD 97 (211)
T ss_dssp CSSEEEECC--SCHHHHHHHHHHHC-CSCEEEECSC
T ss_pred cCCEEEECC--CCHHHHHHHHHHhc-CCCEEEEcCC
Confidence 357777765 78999999998877 5677777655
No 62
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=31.78 E-value=1.3e+02 Score=22.49 Aligned_cols=71 Identities=18% Similarity=0.152 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHh----cCCCEEEEEcC---------------CCCCHHHHHHHH
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELE----RIEKVSVLRND---------------KREGLMRSRVKG 142 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~----~~~~v~vi~~~---------------~n~G~~~a~n~g 142 (157)
.|..+|+.+..... .+|+||-.......+...+. ....+.++..+ ...|.+.|.-.+
T Consensus 35 li~~~l~~~~~~~~----~~i~vv~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a 110 (303)
T 3pnn_A 35 IMDYSVYDAIRAGF----GRLVFVIRHSFEKEFREKILTKYEGRIPVELVFQELDRLPEGFSCPEGREKPWGTNHAVLMG 110 (303)
T ss_dssp HHHHHHHHHHHHTC----CEEEEEECGGGHHHHHHHTHHHHTTTSCEEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTT
T ss_pred HHHHHHHHHHHCCC----CeEEEEcCchHHHHHHHHHHHHhccCCcEEEEecccccccccccccccccccCCcHHHHHHH
Confidence 78888887766532 27777765332223333332 23456776655 467888888888
Q ss_pred HHHcCCCEEEEEcCC
Q psy3172 143 ADAATAPVLTFLDSH 157 (157)
Q Consensus 143 ~~~a~gd~i~flDa~ 157 (157)
......++++ +.+|
T Consensus 111 ~~~i~~~~lV-~~gD 124 (303)
T 3pnn_A 111 RDAIREPFAV-INAD 124 (303)
T ss_dssp TTTCCSCEEE-EESS
T ss_pred HHhcCCCEEE-EECC
Confidence 7777655544 4454
No 63
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=31.30 E-value=77 Score=23.63 Aligned_cols=11 Identities=18% Similarity=0.335 Sum_probs=9.4
Q ss_pred CCCEEEEEcCC
Q psy3172 147 TAPVLTFLDSH 157 (157)
Q Consensus 147 ~gd~i~flDa~ 157 (157)
..+-+++||||
T Consensus 95 ~~~~vlylD~D 105 (263)
T 3u2u_A 95 QYSKCVFMDAD 105 (263)
T ss_dssp TCSEEEEECTT
T ss_pred CcceEEEEcCC
Confidence 56889999997
No 64
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=30.03 E-value=1e+02 Score=23.27 Aligned_cols=71 Identities=11% Similarity=0.070 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc-------------------------CCCEEEEEcCCCCCHH
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER-------------------------IEKVSVLRNDKREGLM 136 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~-------------------------~~~v~vi~~~~n~G~~ 136 (157)
.|..+|+.+.... ..+|+||-+... ..+...+.. ...+.++..+...|.+
T Consensus 45 li~~~l~~l~~~g----i~~iivv~~~~~-~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~ 119 (323)
T 2pa4_A 45 GIELIAAEAAELG----ATRLAIITAPNK-AGVLAHFERSSELEETLMERGKTDQVEIIRRAADLIKAVPVTQDKPLGLG 119 (323)
T ss_dssp HHHHHHHHHHHTT----CCEEEEEECTTC-HHHHHTTSCCHHHHHHHHHTTCHHHHHHTTHHHHHCEEEEEECSSCCCHH
T ss_pred HHHHHHHHHHhCC----CCEEEEEecCcH-HHHHHHHhccchhhhhhhccchhhhhhhhhccccCcceEEEeCCccCCcH
Confidence 7888888877642 127777764432 222222211 1245566666678999
Q ss_pred HHHHHHHHHcCCC--EEEEEcCC
Q psy3172 137 RSRVKGADAATAP--VLTFLDSH 157 (157)
Q Consensus 137 ~a~n~g~~~a~gd--~i~flDa~ 157 (157)
.+...|+.....+ .++++.+|
T Consensus 120 ~al~~a~~~l~~~~d~~lv~~~D 142 (323)
T 2pa4_A 120 HAVGLAESVLDDDEDVVAVMLPD 142 (323)
T ss_dssp HHHHTTGGGSCSSCCEEEEECTT
T ss_pred HHHHHHHHHhcCCCCeEEEEeCC
Confidence 9988888776433 37777776
No 65
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=29.93 E-value=1.7e+02 Score=21.56 Aligned_cols=67 Identities=13% Similarity=0.165 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEE--cCCCCCHHHHHHHHHHHc---CCCEEEEEcC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLR--NDKREGLMRSRVKGADAA---TAPVLTFLDS 156 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~--~~~n~G~~~a~n~g~~~a---~gd~i~flDa 156 (157)
.|...++.+.... ..+|+|+-+ ++.+.+.+..+ +++++. .....|.+. ...+++.. ..++++++++
T Consensus 45 mi~~~l~~l~~~~----i~~IvV~t~---~~~i~~~~~~~-g~~v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~g 115 (264)
T 3k8d_A 45 MIVHVLERARESG----AERIIVATD---HEDVARAVEAA-GGEVCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQG 115 (264)
T ss_dssp HHHHHHHHHHHTT----CSEEEEEES---CHHHHHHHHHT-TCEEEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECT
T ss_pred HHHHHHHHHHhCC----CCEEEEECC---HHHHHHHHHHc-CCEEEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcC
Confidence 6677777766543 128888764 34444444443 455554 333445544 33444443 5789999998
Q ss_pred C
Q psy3172 157 H 157 (157)
Q Consensus 157 ~ 157 (157)
|
T Consensus 116 D 116 (264)
T 3k8d_A 116 D 116 (264)
T ss_dssp T
T ss_pred C
Confidence 7
No 66
>1xkn_A Putative peptidyl-arginine deiminase; alpha-beta protein, NESG, structural genomics, protein struc initiative, PSI; 1.60A {Chlorobium tepidum} SCOP: d.126.1.6
Probab=29.48 E-value=75 Score=24.97 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=24.9
Q ss_pred EEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEe
Q psy3172 70 SVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVD 106 (157)
Q Consensus 70 SiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvd 106 (157)
.||+|.|+... .+....++++.+|+. |||-||
T Consensus 295 ~VivP~fgd~~---D~~A~~~L~~~fP~r--~Vi~v~ 326 (355)
T 1xkn_A 295 VVLVPTYRCPR---DQQAIDILQQCFPKR--EVVGID 326 (355)
T ss_dssp EEEEEECSSTH---HHHHHHHHHHHCTTS--EEEEEE
T ss_pred EEEEeeCCCcc---cHHHHHHHHHHCCCC--EEEEee
Confidence 68889998873 445566777778887 999998
No 67
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=29.14 E-value=1.5e+02 Score=20.94 Aligned_cols=62 Identities=13% Similarity=0.049 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
.|..+++. . .. ..+|+|+-+. . ..+ +.. ..+.++.. ..|...+.-.|++.+..++++++++|
T Consensus 54 li~~~l~~----~-~~-~~~ivvv~~~-~---~~~-~~~-~~v~~~~~--~~~~~~~i~~al~~~~~~~vlv~~~D 115 (236)
T 2px7_A 54 LLEWTLAA----F-RD-AAEVLVALPP-G---AEP-PKG-LGAVFLEG--GATRQASVARLLEAASLPLVLVHDVA 115 (236)
T ss_dssp HHHHHHHH----T-TT-CSEEEEEECT-T---CCC-CTT-CSCEEEEC--CSSHHHHHHHHHHHCCSSEEEECCTT
T ss_pred HHHHHHHh----c-CC-CCeEEEEeCH-H---HHH-hhc-CCcEEEeC--CCchHHHHHHHHHHcCCCeEEEecCc
Confidence 66666665 1 12 2378777654 1 111 211 34666642 34677788888888878899998876
No 68
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=28.92 E-value=2.1e+02 Score=22.46 Aligned_cols=63 Identities=14% Similarity=0.133 Sum_probs=45.6
Q ss_pred CCcEEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc--CCCEEEEE
Q psy3172 66 LPATSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER--IEKVSVLR 128 (157)
Q Consensus 66 ~p~vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~--~~~v~vi~ 128 (157)
.+.-++|+-++|.+...+.++++++-..=-..+.+-.|+++|..-++.....++. ...++...
T Consensus 26 r~nAtfV~L~RN~el~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFteeFk~~~~~~~sg~v~Fg~ 90 (348)
T 1s4n_A 26 KPKACYVTLVRNKELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKAVSSEVKFGI 90 (348)
T ss_dssp CCCEEEEEECCGGGHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHHHHCSSCEEEEE
T ss_pred CCceEEEEEeccHHHHHHHHHHHHHHHHhhccCCCCEEEecCCCCCHHHHHHHHHhcCcceEEEE
Confidence 4578999999998877888888888877544455599999999988775444432 33455443
No 69
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=28.15 E-value=17 Score=25.08 Aligned_cols=69 Identities=10% Similarity=0.186 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc-CC---CEEEEEcCCCCCHHHHHHHHHHHcCCCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER-IE---KVSVLRNDKREGLMRSRVKGADAATAPVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~-~~---~v~vi~~~~n~G~~~a~n~g~~~a~gd~i~flDa~ 157 (157)
.|..+++.+.... ..+|+|+-+.. .+.+.+.+.. +. ++.++.. ...|.+.+...|++.. .+.++++.+|
T Consensus 29 li~~~l~~l~~~~----~~~v~vv~~~~-~~~i~~~~~~~~~~~~~~~~~~~-~~~g~~~si~~al~~~-~~~vlv~~~D 101 (196)
T 3rsb_A 29 LIDYVVSPLLKSK----VNNIFIATSPN-TPKTKEYINSAYKDYKNIVVIDT-SGKGYIEDLNECIGYF-SEPFLVVSSD 101 (196)
T ss_dssp HHHHHHHHHHSSS----CCCEEEECCTT-CHHHHHHHHHHTTTTTEEEE---------CCCCCTTTTTC-SSCEEEEETT
T ss_pred HHHHHHHHHHHCC----CCEEEEEeCCC-hHHHHHHHHhhccCCCCEEEEEC-CCCCcHHHHHHHHHhC-CCCEEEEeCC
Confidence 7888888776553 12777775433 3333334333 22 5665543 3445555566666666 7788888876
No 70
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=28.13 E-value=1.5e+02 Score=20.55 Aligned_cols=72 Identities=8% Similarity=0.071 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCC-----CEEEEEcCCCCCHHHHHHHHHHHc-------CC
Q psy3172 81 SALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIE-----KVSVLRNDKREGLMRSRVKGADAA-------TA 148 (157)
Q Consensus 81 ~~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~-----~v~vi~~~~n~G~~~a~n~g~~~a-------~g 148 (157)
..|..+++.+..... ..+|+|+-+......+........ .+.... ...|...+.-.|+..+ ..
T Consensus 32 pli~~~l~~l~~~~~---~~~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~l~~~~~~~~~~~~ 106 (236)
T 2vsh_A 32 PILIHTIEKFVLEPS---IEKIVVGVHGDWVSHAEDLVDKYLPLYKERIIITK--GGADRNTSIKNIIEAIDAYRPLTPE 106 (236)
T ss_dssp EHHHHHHHHHHTCTT---CCCEEEEECGGGHHHHHHHHHHHCGGGGGGEEEEE--CCSSHHHHHHHHHHHHHHHSCCCTT
T ss_pred cHHHHHHHHHHcCCC---CCeEEEEeCHHHHHHHHHHHHhccccccCceEEEC--CCCchHHHHHHHHHHHHhhccCCCC
Confidence 377778887765422 127777765432122323222211 223332 2346777777777765 34
Q ss_pred CEEEEEcCC
Q psy3172 149 PVLTFLDSH 157 (157)
Q Consensus 149 d~i~flDa~ 157 (157)
++++++++|
T Consensus 107 ~~vlv~~~D 115 (236)
T 2vsh_A 107 DIVVTHDSV 115 (236)
T ss_dssp CEEEEEETT
T ss_pred CEEEEecCC
Confidence 899999886
No 71
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=27.99 E-value=1.2e+02 Score=21.28 Aligned_cols=71 Identities=6% Similarity=0.025 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHc---CCCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLRNDKREGLMRSRVKGADAA---TAPVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~~~~n~G~~~a~n~g~~~a---~gd~i~flDa~ 157 (157)
.|..+++.+..... ..+|+|+-+......+...+.....+.... ...+...+.-.|++.+ ..++++++++|
T Consensus 43 li~~~i~~l~~~~~---~~~ivVv~~~~~~~~~~~~~~~~~~~~~~~--gg~~~~~sv~~al~~~~~~~~~~vlv~~~D 116 (234)
T 1vpa_A 43 LFEYPLSTFLKSEA---IDGVVIVTRREWFEVVEKRVFHEKVLGIVE--GGDTRSQSVRSALEFLEKFSPSYVLVHDSA 116 (234)
T ss_dssp TTHHHHHHHHHCTT---CSEEEEEECGGGHHHHHTTCCCTTEEEEEE--CCSSHHHHHHHHHHHHGGGCCSEEEEEETT
T ss_pred HHHHHHHHHHcCCC---CCeEEEEEChHHHHHHHHHhccCCceEEeC--CCCcHHHHHHHHHHHhhhcCCCEEEEecCc
Confidence 77777877765432 128888764322111111111011122221 2223666666777765 35889999886
No 72
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=24.44 E-value=1.8e+02 Score=20.14 Aligned_cols=70 Identities=23% Similarity=0.129 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhc-C-CCEEEEEcCCCCCHHHHHHHHHHHcC--CCEEEEEcCC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELER-I-EKVSVLRNDKREGLMRSRVKGADAAT--APVLTFLDSH 157 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~-~-~~v~vi~~~~n~G~~~a~n~g~~~a~--gd~i~flDa~ 157 (157)
.|..+++.+..... ..+|+|+-+... ..+...+.. . ..+.++. ...|...+.-.|++... .++++++|+|
T Consensus 34 li~~~l~~l~~~~~---~~~ivvv~~~~~-~~~~~~~~~~~~~~v~~~~--~~~~~~~sv~~al~~~~~~~~~vl~~d~d 107 (228)
T 2yc3_A 34 IALYSFFTFSRMPE---VKEIVVVCDPFF-RDIFEEYEESIDVDLSFAI--PGKERQDSVYSGLQEIDVNSELVCIHDSA 107 (228)
T ss_dssp HHHHHHHHHHHCTT---EEEEEEECCGGG-HHHHHTTTTTSSSEEEEEC--CCSSHHHHHHHHHTTSCTTCSEEEEEETT
T ss_pred HHHHHHHHHHcCCC---CCeEEEEEChHH-HHHHHHHHHhCCCcEEEEC--CCCCHHHHHHHHHHhhccCCCEEEEecCC
Confidence 77778877765422 227777754321 122122221 1 1344443 23577788888887765 3789999976
No 73
>1zbr_A AAQ65385, conserved hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.60A {Porphyromonas gingivalis} SCOP: d.126.1.6
Probab=23.45 E-value=69 Score=25.14 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=24.2
Q ss_pred EEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEe
Q psy3172 70 SVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVD 106 (157)
Q Consensus 70 SiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvd 106 (157)
.||+|+|+... .+....++++.+|+. |||-|+
T Consensus 286 ~VivP~fgd~~---D~~A~~~l~~~fP~r--~Vv~i~ 317 (349)
T 1zbr_A 286 AVLVPTYDSHL---DAVALSVMQGLFPDR--EVIGID 317 (349)
T ss_dssp EEEEEECSSTT---TTHHHHHHHHHCTTS--EEEEEE
T ss_pred EEEEeeCCCcc---cHHHHHHHHHHCCCC--EEEEee
Confidence 78999998763 334556777777777 999997
No 74
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=22.65 E-value=2.2e+02 Score=20.43 Aligned_cols=67 Identities=9% Similarity=0.098 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhhCCCCCccEEEEEeCCCCCchHHHHHhcCCCEEEEE--cCCCCCHHHHHHHHHHHc---CCCEEEEEcC
Q psy3172 82 ALLRSVVSIINRTPAHLLKEIILVDDFSDDPSDGEELERIEKVSVLR--NDKREGLMRSRVKGADAA---TAPVLTFLDS 156 (157)
Q Consensus 82 ~l~~~l~sl~~q~~~~~~~eIivvddgS~d~t~~~~~~~~~~v~vi~--~~~n~G~~~a~n~g~~~a---~gd~i~flDa 156 (157)
.|...++.+..... .+|+|+-+ ++.+...+... +++++. .+...|.+.+.. +++.. ..+.++++++
T Consensus 29 li~~~l~~l~~~~~----~~ivVv~~---~~~i~~~~~~~-g~~v~~~~~~~~~Gt~~~~~-~~~~l~~~~~d~vlv~~g 99 (252)
T 3oam_A 29 MIQWVYEQAMQAGA----DRVIIATD---DERVEQAVQAF-GGVVCMTSPNHQSGTERLAE-VVAKMAIPADHIVVNVQG 99 (252)
T ss_dssp HHHHHHHHHHHTTC----SEEEEEES---CHHHHHHHHHT-TCEEEECCTTCCSHHHHHHH-HHHHTTCCTTSEEEECCT
T ss_pred HHHHHHHHHHhCCC----CeEEEECC---HHHHHHHHHHc-CCEEEEcCCCCCCcHHHHHH-HHHhcCcCCCCEEEEEeC
Confidence 78888887776532 28888764 24444444443 455544 334456665433 44544 4689999988
Q ss_pred C
Q psy3172 157 H 157 (157)
Q Consensus 157 ~ 157 (157)
|
T Consensus 100 D 100 (252)
T 3oam_A 100 D 100 (252)
T ss_dssp T
T ss_pred C
Confidence 7
No 75
>2jer_A Agmatine deiminase; hydrolase, tetramer, AGDI, 5- fold pseudosymmetric structure, agmatine degradation pathway, covalent amidino adduct; HET: AGT; 1.65A {Enterococcus faecalis} SCOP: d.126.1.6
Probab=20.50 E-value=1.3e+02 Score=24.00 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=24.3
Q ss_pred EEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEe
Q psy3172 70 SVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVD 106 (157)
Q Consensus 70 SiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvd 106 (157)
.||+|.|+... .+....++++.+|+. |||-||
T Consensus 313 ~VivP~fgd~~---D~~A~~~L~~~fP~r--~Vi~v~ 344 (389)
T 2jer_A 313 GVIVPQYGDEN---DRLALEQVQTMFPDK--KIVGVN 344 (389)
T ss_dssp EEEEEECSCTT---HHHHHHHHHHHSTTS--EEEEEE
T ss_pred EEEEccCCCch---hHHHHHHHHHHCCCC--EEEEee
Confidence 68889998763 344566777777877 999997
No 76
>3h7c_X Agmatine deiminase; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; HET: MSE 211 1PE; 1.50A {Arabidopsis thaliana} SCOP: d.126.1.6 PDB: 1vkp_A* 2q3u_A* 3h7k_A*
Probab=20.32 E-value=1.1e+02 Score=24.38 Aligned_cols=34 Identities=9% Similarity=0.224 Sum_probs=23.9
Q ss_pred EEEEEEecCCchHHHHHHHHHHHhhCCCCCccEEEEEe
Q psy3172 69 TSVIITFHNEARSALLRSVVSIINRTPAHLLKEIILVD 106 (157)
Q Consensus 69 vSiIIp~yn~~~~~l~~~l~sl~~q~~~~~~~eIivvd 106 (157)
=.||+|+|+... . .+.-..++++.+|+. +||-|+
T Consensus 319 g~VivP~fgd~~-~-D~~A~~~l~~~fP~R--~Vv~I~ 352 (383)
T 3h7c_X 319 GGIIAPQFGDPI-R-DKEAIRVLSDTFPHH--SVVGIE 352 (383)
T ss_dssp TEEEEECCCCTT-H-HHHHHHHHHHHCTTS--EEEEET
T ss_pred CEEEEecCCCcc-c-HHHHHHHHHHHCCCC--EEEeCc
Confidence 368999998751 1 233456677777877 999886
Done!