Query psy3177
Match_columns 425
No_of_seqs 177 out of 1006
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 18:19:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3177.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3177hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lwt_X Phosphoinositide phosph 100.0 7.1E-77 2.4E-81 623.1 22.8 308 16-418 48-370 (505)
2 3lwt_X Phosphoinositide phosph 98.5 2.1E-08 7.2E-13 105.1 1.2 40 249-288 201-242 (505)
3 3r45_C Holliday junction recog 14.5 93 0.0032 23.7 2.3 21 324-344 25-45 (81)
4 3ui3_A Immunoglobulin G-bindin 11.4 1.2E+02 0.0042 26.4 2.4 44 378-421 57-101 (160)
5 1w32_A Endo-1,4-beta-xylanase 10.0 8.2E+02 0.028 23.3 8.3 46 295-347 76-127 (348)
6 1xyz_A 1,4-beta-D-xylan-xylano 9.6 4.4E+02 0.015 25.2 6.1 25 323-347 126-154 (347)
7 1v0l_A Endo-1,4-beta-xylanase 8.8 4.9E+02 0.017 24.5 6.1 87 295-390 77-175 (313)
8 2nzw_A Alpha1,3-fucosyltransfe 8.7 2.2E+02 0.0075 28.1 3.5 42 296-337 256-298 (371)
9 1nq6_A XYS1; glycoside hydrola 8.2 2.5E+02 0.0085 26.2 3.6 46 296-347 77-126 (302)
10 3nyi_A FAT acid-binding protei 7.9 2.5E+02 0.0084 26.5 3.4 87 322-419 66-168 (297)
No 1
>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-77 Score=623.09 Aligned_cols=308 Identities=28% Similarity=0.444 Sum_probs=267.3
Q ss_pred cccceEEEEEEEEEEEEcccCCcceEEEEEEeCeEEeeEeCCCceEEEEeEEEEEecCcc---chH-HHHHHHHhhcCCC
Q psy3177 16 QARAVIISRLSCERAGTRFIGETTVLYLVMVTGCVSVGKIHESEIFRVTSTAFISLRNQA---QDE-ERISEVRKLLNSG 91 (425)
Q Consensus 16 ~~~~~~~~~~GilG~i~l~~g~~~~~yLvvit~~~~vg~i~~~~Iy~I~~~~~i~l~~~~---~de-~~~~~l~~~l~~g 91 (425)
+....+.+++||||+|++..| .||+|||+++.||.|.||.||+|++++|||+..+. +|| +++++|+++++++
T Consensus 48 ~~~~~~~~i~GilG~i~l~~~----~YlivIT~~~~vg~i~gh~Iy~I~~~~~ipl~~~~~~~~~E~~yl~ll~~~l~s~ 123 (505)
T 3lwt_X 48 PVQGEVVKIASLMGFIKLKLN----RYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLKNS 123 (505)
T ss_dssp CSSSCCEEESEEEEEEEETTE----EEEEEEEEEEEEEEETTEEEEEEEEEEEEESCTTCCCCHHHHHHHHHHHHHHHHC
T ss_pred CCcCceeEEEEEEEEEEECCC----cEEEEEEccEEEEEECCeEEEEEEEEEEEEecCccccChhHHHHHHHHHHHhcCC
Confidence 344457899999999999986 89999999999999999999999999999998532 344 5678899999999
Q ss_pred cEEEeecCCCCCccccchhhhhccC------CCCCCCceeechhhhHHHHhcCC---CCCCcEEEEEeeeEEEEEEEECc
Q psy3177 92 TFYFSWSSGAADSLDLTLCAQRRKY------TSETDRRFFWNRMLHIHLLRFSI---DPSPWLLKIMCGSIEIRTVYVGH 162 (425)
Q Consensus 92 ~fYfSyt~~~~~~~DlT~s~Q~~~~------~~~~d~rF~WN~~l~~~l~~~~~---~~~~~~l~li~G~v~~~~~~~~~ 162 (425)
+||||| +||||+++|++.. .+.+|++|+||++|+++|++++. +.+.|++|+||||+++..+.+.+
T Consensus 124 ~FYfS~------~yDLT~slQ~~~~~~~~~~~~~~d~~F~WN~~l~~~l~~~~~~~~~~~~~~~piI~Gfv~~~~~~~~~ 197 (505)
T 3lwt_X 124 TFYFSY------TYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQPVIYGYAKTVDAVLNA 197 (505)
T ss_dssp CCEECS------SSCTTSCHHHHHHHCSCCCGGGSCTTTCTTTGGGHHHHHHHTTCGGGGGGCCCCBSSEEEEEEEEETT
T ss_pred CEEEeC------CcCCCcchhhccccCccccccCCCCceechHHHHHHHHHhcccCcchhhhhhHhhcCceEEEEEEECC
Confidence 999999 6999999999853 24579999999999999998743 23589999999999999888999
Q ss_pred eeEEEEEEEeeeccccCcccccccCCCCCcceeeEeeeEEEEecCceeeeEEecCCCCccccCCCCCCCcccccccCCCC
Q psy3177 163 RQARAVIISRLSCERAGTRFNVRGVNDDGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFWEQPGIQHPKRQIQSRNNTP 242 (425)
Q Consensus 163 ~~~~~~LISRrS~~raGtRy~~RGid~~G~vANfVETEqIl~~~~~~~sfvQ~RGSvPl~W~q~~~~~~~~~i~~~~~~~ 242 (425)
..+.++||||||++||||||++||+|++|+|||||||||||+.++..
T Consensus 198 ~~~~~tLISRRS~~raGtRy~~RGidd~G~VANfVETEqIv~~~~~~--------------------------------- 244 (505)
T 3lwt_X 198 TPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAENPE--------------------------------- 244 (505)
T ss_dssp EEEEEEEEEEECCCCCSSSCCSSSBCTTSCCSCEEEEEEEEEEECTT---------------------------------
T ss_pred ceEEEEEEEEEecccCCccccccCcCCCCCccceeeEEEEEEeCCCC---------------------------------
Confidence 99999999999999999999999999999999999999999873200
Q ss_pred CcccchhhhhhhhhccccccccccCCCCCCCcccceeeeEeEeeCCceeEEEEeecCceeeeecCC-cccccceeeecCC
Q psy3177 243 NSWMLMDVLEFCRSMQVRNKFNVRGVNDDGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFWEQPG-IQVGSHKVRMSRG 321 (425)
Q Consensus 243 ~~~~~~~~~~~~r~~~~~~r~~~rGid~~G~van~vete~i~~~~~~~~SfvQiRGSVPlfW~Q~~-~~~~~~~i~i~~~ 321 (425)
.| ...++||||+||||||||+|.+ ++.+ |+|.+.
T Consensus 245 ----------------------------~~--------------~~~~~SfvQiRGSVPlfW~Q~~~l~~k-P~i~i~-- 279 (505)
T 3lwt_X 245 ----------------------------SE--------------KIHVFSFLQTRGSVPIYWAEINNLKYK-PNLVLG-- 279 (505)
T ss_dssp ----------------------------TC--------------CEEEEEEEEEEECCCSBSCCCCCSSSC-CCCCCC--
T ss_pred ----------------------------CC--------------CccEEEEEEeccccCceeeecCCcCcC-CCeeec--
Confidence 00 1257888888888888888854 3333 456554
Q ss_pred ccccHHHHHHHHHHHHHhcCCceEEeccCcccCCCCchhhhHHHHHHHHhhcCCCCCCCCEEEeecchhhhcCCcchHHH
Q psy3177 322 VESSSAAFNRHMGFIKERYGHQVIVNLLGTSLIGSKEGEATLSNLFQSHHAKSSHSSDVPHIVYDYHQECRGGNTKNISK 401 (425)
Q Consensus 322 ~~~~~~a~~~Hf~~L~~~YG~~~iVNLl~~~~~~~k~~E~~L~~~f~~~i~~~~~~~~i~yi~fDfh~~~k~~~~~~l~~ 401 (425)
+.+++||++||+.|.++||.++||||| ++|++|..|+++|++++..++. +.|+|++||||++||+++++++..
T Consensus 280 -~~~~~a~~kHF~~L~~~YG~~~iVNLl-----~~k~~E~~L~~~y~~~v~~l~~-~~i~y~~fDfh~~~k~~~~~~v~~ 352 (505)
T 3lwt_X 280 -ENSLDATKKHFDQQKELYGDNYLVNLV-----NQKGHELPVKEGYESVVHALND-PKIHYVYFDFHHECRKMQWHRVKL 352 (505)
T ss_dssp -HHHHHHHHHHHHHHHHHHSEEEEEEEC-----CCSSCCCHHHHHHHHHHHHHCC-TTEEEEEECCCSSTTTHHHHHHHH
T ss_pred -CchHHHHHHHHHHHHHHhCCcEEEecc-----cCCCchhHHHHHHHHHHHHhcc-cCCceEEecchHhhhccchhHHHH
Confidence 348999999999999999999999999 6789999999999999998875 899999999999999999999999
Q ss_pred HHHHHHHH-HHhccEEEE
Q psy3177 402 LLAKVEKY-LQAFGLFYA 418 (425)
Q Consensus 402 L~~~i~~~-l~~~Gff~~ 418 (425)
|++.+.+. ++++|||+.
T Consensus 353 ll~~l~~~~~~~~g~f~~ 370 (505)
T 3lwt_X 353 LIDHLEKLGLSNEDFFHK 370 (505)
T ss_dssp HHHHHHHHTCCTTCSEEE
T ss_pred HHHHHHHhcccccCceEe
Confidence 99999885 789999997
No 2
>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae}
Probab=98.49 E-value=2.1e-08 Score=105.09 Aligned_cols=40 Identities=35% Similarity=0.528 Sum_probs=35.4
Q ss_pred hhhhhhhhcc--ccccccccCCCCCCCcccceeeeEeEeeCC
Q psy3177 249 DVLEFCRSMQ--VRNKFNVRGVNDDGHVANFVETEQVLFLDD 288 (425)
Q Consensus 249 ~~~~~~r~~~--~~~r~~~rGid~~G~van~vete~i~~~~~ 288 (425)
.++.++|||. +|+||++||+|++||||||||||||+..++
T Consensus 201 ~~tLISRRS~~raGtRy~~RGidd~G~VANfVETEqIv~~~~ 242 (505)
T 3lwt_X 201 VLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAEN 242 (505)
T ss_dssp EEEEEEEECCCCCSSSCCSSSBCTTSCCSCEEEEEEEEEEEC
T ss_pred EEEEEEEEecccCCccccccCcCCCCCccceeeEEEEEEeCC
Confidence 4566899985 889999999999999999999999998754
No 3
>3r45_C Holliday junction recognition protein; histone fold, centromere, CENP-A, histone chaperone, hjurp; 2.60A {Homo sapiens}
Probab=14.50 E-value=93 Score=23.66 Aligned_cols=21 Identities=29% Similarity=0.498 Sum_probs=17.9
Q ss_pred ccHHHHHHHHHHHHHhcCCce
Q psy3177 324 SSSAAFNRHMGFIKERYGHQV 344 (425)
Q Consensus 324 ~~~~a~~~Hf~~L~~~YG~~~ 344 (425)
.+..-|++|+..|+++|+.|.
T Consensus 25 ~sr~RFQ~~Mq~lieKYn~PF 45 (81)
T 3r45_C 25 ASRRRFQRRMQRLIEKYNQPF 45 (81)
T ss_dssp HHHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHHHHHcCCCC
Confidence 456789999999999999874
No 4
>3ui3_A Immunoglobulin G-binding protein G, virulence-ASS protein D; ferrodoxin-like fold, virulence associated protein D, ribonu RNA binding protein; 2.80A {Streptococcus}
Probab=11.41 E-value=1.2e+02 Score=26.35 Aligned_cols=44 Identities=14% Similarity=0.274 Sum_probs=33.2
Q ss_pred CCCCEEEeecchhhhcCCc-chHHHHHHHHHHHHHhccEEEEcCC
Q psy3177 378 SDVPHIVYDYHQECRGGNT-KNISKLLAKVEKYLQAFGLFYAKGA 421 (425)
Q Consensus 378 ~~i~yi~fDfh~~~k~~~~-~~l~~L~~~i~~~l~~~Gff~~~~~ 421 (425)
....-|.||+-..|=...| +....-...|+..|.+.||-+..|+
T Consensus 57 ~~MYAIaFDLdt~~LKk~Y~~~y~nAY~DIrk~Le~~GF~~~QGS 101 (160)
T 3ui3_A 57 GSMYALAFDLKIEILKKEYGEPYNKAYDDLRQELELLGFEWTQGS 101 (160)
T ss_dssp CCEEEEEEEECHHHHHHHTCSSCHHHHHHHHHHHHHTTEEEETTB
T ss_pred CceEEEEEeccHHHHHHHcCCchhHHHHHHHHHHHHcCCEeeeCc
Confidence 4556789999887655444 3455677789999999999999874
No 5
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=10.01 E-value=8.2e+02 Score=23.33 Aligned_cols=46 Identities=20% Similarity=0.309 Sum_probs=28.6
Q ss_pred EeecCceeeee--cCCcccccceeeecCCccccHHHHHHHHHHHHHhcCCce----EEe
Q psy3177 295 QTRGSVPLFWE--QPGIQVGSHKVRMSRGVESSSAAFNRHMGFIKERYGHQV----IVN 347 (425)
Q Consensus 295 QiRGSVPlfW~--Q~~~~~~~~~i~i~~~~~~~~~a~~~Hf~~L~~~YG~~~----iVN 347 (425)
.+||-.++..+ |.+..+... . ..-..++.+|...+..+|+..+ ++|
T Consensus 76 ~v~ghtl~W~~~~q~P~W~~~~------~-~~~~~~~~~~i~~v~~rY~g~i~~wdv~N 127 (348)
T 1w32_A 76 TVHGHALVWHPSYQLPNWASDS------N-ANFRQDFARHIDTVAAHFAGQVKSWDVVN 127 (348)
T ss_dssp EEEEEEEECCCGGGCCTTCSTT------C-TTHHHHHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred EEEEEeeecCccccCchhhhcC------C-HHHHHHHHHHHHHHHHHhCCceeEEEeec
Confidence 36777776445 443323211 1 1256788999999999998643 566
No 6
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=9.57 E-value=4.4e+02 Score=25.23 Aligned_cols=25 Identities=20% Similarity=0.404 Sum_probs=19.4
Q ss_pred cccHHHHHHHHHHHHHhcCCce----EEe
Q psy3177 323 ESSSAAFNRHMGFIKERYGHQV----IVN 347 (425)
Q Consensus 323 ~~~~~a~~~Hf~~L~~~YG~~~----iVN 347 (425)
+....++.+|...+..+|+..+ ++|
T Consensus 126 ~~~~~~~~~~i~~v~~ry~g~v~~WdV~N 154 (347)
T 1xyz_A 126 DSLLAVMKNHITTVMTHYKGKIVEWDVAN 154 (347)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCeeEEEEeec
Confidence 3456789999999999997643 567
No 7
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=8.85 E-value=4.9e+02 Score=24.54 Aligned_cols=87 Identities=20% Similarity=0.217 Sum_probs=45.0
Q ss_pred EeecCceeeeecCCcccccceeeecCCccccHHHHHHHHHHHHHhcCC-ce---EEe-ccCcccC--CCC-----chhhh
Q psy3177 295 QTRGSVPLFWEQPGIQVGSHKVRMSRGVESSSAAFNRHMGFIKERYGH-QV---IVN-LLGTSLI--GSK-----EGEAT 362 (425)
Q Consensus 295 QiRGSVPlfW~Q~~~~~~~~~i~i~~~~~~~~~a~~~Hf~~L~~~YG~-~~---iVN-Ll~~~~~--~~k-----~~E~~ 362 (425)
.+||-.++..+|.+..+.. + +.+.-..++.+|...+..+|+. +. ++| -+..+.. .+. -++.-
T Consensus 77 ~v~ghtlvW~~q~P~W~~~----~--~~~~~~~~~~~~i~~v~~ry~g~i~~wdv~NE~~~~~g~~~~~~~~~~~~G~~~ 150 (313)
T 1v0l_A 77 QVRGHTLAWHSQQPGWMQS----L--SGSALRQAMIDHINGVMAHYKGKIVQWDVVNEAFADGSSGARRDSNLQRSGNDW 150 (313)
T ss_dssp EEEEEEEECSSSCCHHHHT----C--CHHHHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCSSSSCCBCCSHHHHTCTTH
T ss_pred EEEEEeecCcCcCchhhhc----C--CHHHHHHHHHHHHHHHHHHcCCcceEEeeecccccCCCcccccCcHHHhhhHHH
Confidence 3577666533454322211 1 1233457889999999999975 33 566 3311000 000 12445
Q ss_pred HHHHHHHHhhcCCCCCCCCEEEeecchh
Q psy3177 363 LSNLFQSHHAKSSHSSDVPHIVYDYHQE 390 (425)
Q Consensus 363 L~~~f~~~i~~~~~~~~i~yi~fDfh~~ 390 (425)
+..+|+.+-+.- ++.+...=||+-+
T Consensus 151 i~~af~~Ar~~d---P~a~L~~Ndyn~~ 175 (313)
T 1v0l_A 151 IEVAFRTARAAD---PSAKLCYNDYNVE 175 (313)
T ss_dssp HHHHHHHHHHHC---TTSEEEEEESSCC
T ss_pred HHHHHHHHHhhC---CCCEEEEeccccc
Confidence 677888765532 4455444466543
No 8
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=8.71 E-value=2.2e+02 Score=28.14 Aligned_cols=42 Identities=10% Similarity=0.206 Sum_probs=25.3
Q ss_pred eecCceeeeecCCc-ccccceeeecCCccccHHHHHHHHHHHH
Q psy3177 296 TRGSVPLFWEQPGI-QVGSHKVRMSRGVESSSAAFNRHMGFIK 337 (425)
Q Consensus 296 iRGSVPlfW~Q~~~-~~~~~~i~i~~~~~~~~~a~~~Hf~~L~ 337 (425)
..|+||++|.-+.. .+.|+.--|.-..-.+..++..|...|-
T Consensus 256 ~~g~VPI~~G~~~~~~~~Pp~SfI~~~dF~s~~~La~yL~~L~ 298 (371)
T 2nzw_A 256 FSHTIPIYWGSPSVAKDFNPKSFVNVHDFKNFDEAIDYIKYLH 298 (371)
T ss_dssp HTTCEEEEESCTTGGGTSCGGGSEEGGGSSSHHHHHHHHHHHH
T ss_pred hCCeEEEEECCCchhhhCCCCceEEcccCCCHHHHHHHHHHHh
Confidence 47999999998865 2345442222212245666777776554
No 9
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=8.19 E-value=2.5e+02 Score=26.25 Aligned_cols=46 Identities=22% Similarity=0.271 Sum_probs=28.6
Q ss_pred eecCceeeeecCCcccccceeeecCCccccHHHHHHHHHHHHHhcCCc-e---EEe
Q psy3177 296 TRGSVPLFWEQPGIQVGSHKVRMSRGVESSSAAFNRHMGFIKERYGHQ-V---IVN 347 (425)
Q Consensus 296 iRGSVPlfW~Q~~~~~~~~~i~i~~~~~~~~~a~~~Hf~~L~~~YG~~-~---iVN 347 (425)
+||-+++..+|.+..+.+ .+.+....++.+|...+..+|+.. . ++|
T Consensus 77 v~gh~lvW~~~~P~W~~~------~~~~~~~~~~~~~i~~v~~ry~g~v~~WdV~N 126 (302)
T 1nq6_A 77 VRGHTLVWHSQLPGWVSP------LAATDLRSAMNNHITQVMTHYKGKIHSWDVVN 126 (302)
T ss_dssp EEEEEEEESTTCCTTTTT------SCHHHHHHHHHHHHHHHHHHTTTSCSEEEEEE
T ss_pred EEEEecccCCCCChhhhc------CCHHHHHHHHHHHHHHHHHHcCCceEEEEeec
Confidence 566666644554433321 122345678999999999999753 3 466
No 10
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=7.92 E-value=2.5e+02 Score=26.54 Aligned_cols=87 Identities=13% Similarity=0.105 Sum_probs=51.5
Q ss_pred ccccHHHHHHHHHHHHHhcCCceEEeccCcccCCCCchhhhHHHHHHHHhhcC----CCCCCCCEEEeecchhhhcCC--
Q psy3177 322 VESSSAAFNRHMGFIKERYGHQVIVNLLGTSLIGSKEGEATLSNLFQSHHAKS----SHSSDVPHIVYDYHQECRGGN-- 395 (425)
Q Consensus 322 ~~~~~~a~~~Hf~~L~~~YG~~~iVNLl~~~~~~~k~~E~~L~~~f~~~i~~~----~~~~~i~yi~fDfh~~~k~~~-- 395 (425)
..++...|...|+++.+.|..+++|.|-+ + ||..|..+.... ..-++.+...+|=+..+-+.+
T Consensus 66 Sqps~~~~~~~f~~l~~~g~~ii~i~iSs----~-------LSGTy~sA~~aa~~~~e~~~~~~I~ViDS~~~s~g~g~~ 134 (297)
T 3nyi_A 66 SLPSVESYADVFRSFVEQGFPVVCFTITT----L-------FSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALL 134 (297)
T ss_dssp ECCCHHHHHHHHHHHHTTTCCEEEEESCT----T-------TCSHHHHHHHHHHHHHHHCTTCCEEEEECSCCHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHCCCeEEEEECCC----c-------HhHHHHHHHHHHHHHHhhCCCCeEEEEeCCchHHHHHHH
Confidence 34577889999999999987778888863 2 333343332111 011345666777655333222
Q ss_pred ----------cchHHHHHHHHHHHHHhccEEEEc
Q psy3177 396 ----------TKNISKLLAKVEKYLQAFGLFYAK 419 (425)
Q Consensus 396 ----------~~~l~~L~~~i~~~l~~~Gff~~~ 419 (425)
...++.+.+.+++..++...|..-
T Consensus 135 v~~A~~l~~~G~s~~eI~~~l~~~~~~~~~~f~v 168 (297)
T 3nyi_A 135 IDQFVRMLEDGLSFEQAMSKLDALMASARIFFTV 168 (297)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHCEEEEEC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEEEE
Confidence 234566777777777766655443
Done!