Query psy3177
Match_columns 425
No_of_seqs 177 out of 1006
Neff 6.6
Searched_HMMs 13730
Date Fri Aug 16 18:19:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3177.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/3177hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hf2a2 c.102.1.1 (A:1-99) Cel 25.8 14 0.00099 27.6 1.7 31 394-424 16-46 (99)
2 d2nzwa1 c.87.1.11 (A:1-349) Al 10.1 87 0.0063 28.4 3.6 14 296-309 256-269 (349)
3 d1fh9a_ c.1.8.3 (A:) Xylanase 9.0 73 0.0053 27.6 2.5 46 296-347 77-126 (312)
4 d2uuyb1 g.8.1.3 (B:24-74) Tryp 8.5 56 0.0041 20.5 1.0 11 218-228 2-12 (51)
5 d1mgpa_ c.119.1.1 (A:) Hypothe 7.9 1.7E+02 0.012 25.1 4.5 85 323-419 66-166 (285)
6 d1i1wa_ c.1.8.3 (A:) Xylanase 7.2 91 0.0066 27.1 2.3 83 323-410 102-195 (303)
7 d1jova_ b.30.5.7 (A:) Hypothet 6.9 2E+02 0.015 24.1 4.5 22 206-227 39-60 (269)
8 d1ta3b_ c.1.8.3 (B:) Xylanase 6.5 1.1E+02 0.0078 26.5 2.3 26 323-348 99-128 (301)
9 d1us3a2 c.1.8.3 (A:243-606) Xy 6.4 1.3E+02 0.0092 26.6 2.9 25 323-347 112-142 (364)
10 d2bh1x1 d.52.10.1 (X:14-81) Ge 6.0 94 0.0068 21.1 1.3 31 333-368 38-68 (68)
No 1
>d1hf2a2 c.102.1.1 (A:1-99) Cell-division inhibitor MinC, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=25.77 E-value=14 Score=27.63 Aligned_cols=31 Identities=26% Similarity=0.548 Sum_probs=27.7
Q ss_pred CCcchHHHHHHHHHHHHHhccEEEEcCCeec
Q psy3177 394 GNTKNISKLLAKVEKYLQAFGLFYAKGANVS 424 (425)
Q Consensus 394 ~~~~~l~~L~~~i~~~l~~~Gff~~~~~~v~ 424 (425)
..|+++..|++.+..-+.+.|=|.+.|++++
T Consensus 16 ~~Y~~lE~llneI~~K~~~m~~FFa~gdkI~ 46 (99)
T d1hf2a2 16 KDYQNLEEVLNAISARITQMGGFFAKGDRIS 46 (99)
T ss_dssp CCCSCHHHHHHHHHHHHHHTGGGCCTTCEEE
T ss_pred cchhhHHHHHHHHHHHHHHHHhhhcCCCEEE
Confidence 4689999999999999999998889998875
No 2
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]}
Probab=10.14 E-value=87 Score=28.36 Aligned_cols=14 Identities=21% Similarity=0.975 Sum_probs=11.8
Q ss_pred eecCceeeeecCCc
Q psy3177 296 TRGSVPLFWEQPGI 309 (425)
Q Consensus 296 iRGSVPlfW~Q~~~ 309 (425)
..|+||++|.-+..
T Consensus 256 ~~g~iPIy~G~~~i 269 (349)
T d2nzwa1 256 FSHTIPIYWGSPSV 269 (349)
T ss_dssp HTTCEEEEESCTTG
T ss_pred hCCeEEEEECCCcH
Confidence 57999999998764
No 3
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]}
Probab=9.04 E-value=73 Score=27.64 Aligned_cols=46 Identities=15% Similarity=0.162 Sum_probs=28.9
Q ss_pred eecCceeeeecCCcccccceeeecCCccccHHHHHHHHHHHHHhcCCce----EEe
Q psy3177 296 TRGSVPLFWEQPGIQVGSHKVRMSRGVESSSAAFNRHMGFIKERYGHQV----IVN 347 (425)
Q Consensus 296 iRGSVPlfW~Q~~~~~~~~~i~i~~~~~~~~~a~~~Hf~~L~~~YG~~~----iVN 347 (425)
+||-+|+.+.+.+..... .+.+....++..|+..+..+|+..+ |+|
T Consensus 77 v~gh~lvw~~~~p~~~~~------~~~~~~~~~~~~~i~~v~~ry~g~i~~WdV~N 126 (312)
T d1fh9a_ 77 LYGHTLVWHSQLPDWAKN------LNGSAFESAMVNHVTKVADHFEGKVASWDVVN 126 (312)
T ss_dssp EEEEEEEESSSCCHHHHT------CCHHHHHHHHHHHHHHHHHHTTTTCCEEEEEE
T ss_pred EEEecccccccccccccc------cchHHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 578777755553321110 1233455778899999999998754 566
No 4
>d2uuyb1 g.8.1.3 (B:24-74) Tryptase inhibitor {Brown ear tick (Rhipicephalus appendiculatus) [TaxId: 34631]}
Probab=8.50 E-value=56 Score=20.47 Aligned_cols=11 Identities=36% Similarity=0.860 Sum_probs=8.9
Q ss_pred CCCccccCCCC
Q psy3177 218 SVPLFWEQPGI 228 (425)
Q Consensus 218 SvPl~W~q~~~ 228 (425)
+||+-|+.|.-
T Consensus 2 tvpigwsepvk 12 (51)
T d2uuyb1 2 TVPIGWSEPVK 12 (51)
T ss_dssp CCCTTCCCCCC
T ss_pred cccccccchhh
Confidence 68999999753
No 5
>d1mgpa_ c.119.1.1 (A:) Hypothetical protein TM841 {Thermotoga maritima [TaxId: 2336]}
Probab=7.86 E-value=1.7e+02 Score=25.05 Aligned_cols=85 Identities=22% Similarity=0.316 Sum_probs=52.0
Q ss_pred cccHHHHHHHHHHHHHh-cCCceEEeccCcccCCCCchhhhHHHHHHHHhhcCCCCCCCCEEEeecchhhhcCCc-----
Q psy3177 323 ESSSAAFNRHMGFIKER-YGHQVIVNLLGTSLIGSKEGEATLSNLFQSHHAKSSHSSDVPHIVYDYHQECRGGNT----- 396 (425)
Q Consensus 323 ~~~~~a~~~Hf~~L~~~-YG~~~iVNLl~~~~~~~k~~E~~L~~~f~~~i~~~~~~~~i~yi~fDfh~~~k~~~~----- 396 (425)
.++...+.+-|+++.+. |-.++++.+=+ + ||..|..+..... ..+.+...+|=+.-+-+.++
T Consensus 66 ~ps~~~~~~~~~~~~~~gyd~vi~i~iSs----~-------lSgty~~a~~a~~-~~~~~v~ViDS~~~s~g~g~~v~~a 133 (285)
T d1mgpa_ 66 QPSVEDFKKRYLKYKEEDYDVVLVLTLSS----K-------LSGTYNSAVLASK-EVDIPVYVVDTLLASGAIPLPARVA 133 (285)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEESCT----T-------TCSHHHHHHHHHH-HSSSCEEEEECSCCGGGTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCcEEEEecCc----h-------hhHHHHHHHHHHH-hcCCcEEEEecccchhhHHHHHHHH
Confidence 35778899999999887 88888887753 2 3334444322111 13456778887765554433
Q ss_pred -------chHHHHHHHHHHHHHhc---cEEEEc
Q psy3177 397 -------KNISKLLAKVEKYLQAF---GLFYAK 419 (425)
Q Consensus 397 -------~~l~~L~~~i~~~l~~~---Gff~~~ 419 (425)
..++.+.+.+++..++. .||..+
T Consensus 134 ~~~~~~G~s~~ei~~~l~~~~~~~~~~~~~~v~ 166 (285)
T d1mgpa_ 134 REMLENGATIEEVLKKLDERMKNKDFKAIFYVS 166 (285)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHTTCEEEEEEES
T ss_pred HHHHHcCCCHHHHHHHHHHHhhcCeeEEEEEeC
Confidence 24555666777766653 567655
No 6
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]}
Probab=7.22 E-value=91 Score=27.13 Aligned_cols=83 Identities=17% Similarity=0.259 Sum_probs=42.7
Q ss_pred cccHHHHHHHHHHHHHhcCCc-e---EEeccCcccCC--CC-----chhhhHHHHHHHHhhcCCCCCCCCEEEeecchhh
Q psy3177 323 ESSSAAFNRHMGFIKERYGHQ-V---IVNLLGTSLIG--SK-----EGEATLSNLFQSHHAKSSHSSDVPHIVYDYHQEC 391 (425)
Q Consensus 323 ~~~~~a~~~Hf~~L~~~YG~~-~---iVNLl~~~~~~--~k-----~~E~~L~~~f~~~i~~~~~~~~i~yi~fDfh~~~ 391 (425)
+....++..|+..+..+|+.. . |||=.-.+.-. .. -++..+..+|+.+-+. .++.+.+.=||.-+.
T Consensus 102 ~~~~~~~~~~i~~v~~rY~g~i~~WdVvNE~~~~~~~~r~~~~~~~~g~d~i~~af~~Ar~~---dP~a~L~~Ndy~~~~ 178 (303)
T d1i1wa_ 102 NTLTNVMKNHITTLMTRYKGKIRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAA---DPNAKLYINDYNLDS 178 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHH---CTTSEEEEEESSCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCCchhhhcccccCCCcccccCchhhcccHHHHHHHHHHHHHh---CCCCEEEeecCcccC
Confidence 344567889999999999764 3 56632100000 00 0133456777765432 245665555665431
Q ss_pred hcCCcchHHHHHHHHHHHH
Q psy3177 392 RGGNTKNISKLLAKVEKYL 410 (425)
Q Consensus 392 k~~~~~~l~~L~~~i~~~l 410 (425)
........++..++..+
T Consensus 179 --~~~~k~~~~~~~v~~l~ 195 (303)
T d1i1wa_ 179 --ASYPKTQAIVNRVKKWR 195 (303)
T ss_dssp --SSSHHHHHHHHHHHHHH
T ss_pred --CcHHHHHHHHHHHHHHH
Confidence 11223444555555433
No 7
>d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]}
Probab=6.87 E-value=2e+02 Score=24.08 Aligned_cols=22 Identities=9% Similarity=0.265 Sum_probs=13.1
Q ss_pred cCceeeeEEecCCCCccccCCC
Q psy3177 206 DDEVTSYVQTRGSVPLFWEQPG 227 (425)
Q Consensus 206 ~~~~~sfvQ~RGSvPl~W~q~~ 227 (425)
+-.++|+.-..|.-++.|.-++
T Consensus 39 Ga~l~s~~~~~~~~e~Lw~s~~ 60 (269)
T d1jova_ 39 GAQLISWKPQNAKQDVLWLSEV 60 (269)
T ss_dssp TTEEEEEEETTCSSCSBCBCTT
T ss_pred CCEEEEEEECCCCceEEEeCCh
Confidence 3456665544566777776543
No 8
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]}
Probab=6.47 E-value=1.1e+02 Score=26.47 Aligned_cols=26 Identities=19% Similarity=0.404 Sum_probs=19.4
Q ss_pred cccHHHHHHHHHHHHHhcCCce----EEec
Q psy3177 323 ESSSAAFNRHMGFIKERYGHQV----IVNL 348 (425)
Q Consensus 323 ~~~~~a~~~Hf~~L~~~YG~~~----iVNL 348 (425)
+.....+.+|+..+..+|+..+ |||=
T Consensus 99 ~~~~~~~~~~I~~v~~rY~g~i~~WDVvNE 128 (301)
T d1ta3b_ 99 NTLRSVMTNHINEVVGRYKGKIMHWDVVNE 128 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCSEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEeecc
Confidence 3445678999999999997643 5663
No 9
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]}
Probab=6.41 E-value=1.3e+02 Score=26.64 Aligned_cols=25 Identities=40% Similarity=0.620 Sum_probs=18.8
Q ss_pred cccHHHHHHHHHHHHHhc---CCce---EEe
Q psy3177 323 ESSSAAFNRHMGFIKERY---GHQV---IVN 347 (425)
Q Consensus 323 ~~~~~a~~~Hf~~L~~~Y---G~~~---iVN 347 (425)
+....++.+|+..+..+| |.+. |+|
T Consensus 112 ~~~~~~~~~~I~~vv~ry~~~G~I~~WDVvN 142 (364)
T d1us3a2 112 EDFLAALDTHITTIVDHYEAKGNLVSWDVVN 142 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhccCCceEEEEEec
Confidence 344567889999999999 5564 566
No 10
>d2bh1x1 d.52.10.1 (X:14-81) General secretion pathway protein E, EpsE {Vibrio cholerae [TaxId: 666]}
Probab=6.04 E-value=94 Score=21.05 Aligned_cols=31 Identities=23% Similarity=0.193 Sum_probs=24.4
Q ss_pred HHHHHHhcCCceEEeccCcccCCCCchhhhHHHHHH
Q psy3177 333 MGFIKERYGHQVIVNLLGTSLIGSKEGEATLSNLFQ 368 (425)
Q Consensus 333 f~~L~~~YG~~~iVNLl~~~~~~~k~~E~~L~~~f~ 368 (425)
+.++.+..|.+..+..+ +...-|..|+++|+
T Consensus 38 l~E~rR~~g~~~~l~~~-----~~~~Fe~~L~~~YQ 68 (68)
T d2bh1x1 38 LVETKRVVKHAFQLIEL-----SQAEFESKLTQVYQ 68 (68)
T ss_dssp HHHHHHHHCSCEEEEEC-----CHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCCCceEEC-----CHHHHHHHHHHHcC
Confidence 45677778999888888 55677889988874
Done!