BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy318
(438 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46441|N2B_HAEIR Putative ATPase N2B OS=Haematobia irritans PE=2 SV=1
Length = 464
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/441 (46%), Positives = 278/441 (63%), Gaps = 65/441 (14%)
Query: 11 PSKQYYEKLSNNEIQEDKHQEQIVKQLDNVYVSIKNYAP-----QSKSMFSFFQDKVKQ- 64
P + Y +++ + E+ DK Q++ ++L+++Y ++KNY P ++ S FF +K+
Sbjct: 37 PMQAYEQRIESKELLPDKVQKKTTQELEDLYNTLKNYQPKPVRVETSSGGGFFGRFMKKE 96
Query: 65 -------------PKGLYIYGAVGGGKTMLMDIFYESCE-TKQKQRVHFNKFMLDVHAKI 110
PKG+YIYG+VGGGKT LMD+FY C+ +KQRVHFN FM VH I
Sbjct: 97 QSAPKIELLNTTAPKGMYIYGSVGGGKTTLMDMFYSCCDDIPKKQRVHFNSFMSKVHGLI 156
Query: 111 HEVKKILARDKAKSYDPGVPNRLDVMKEEEEKEREREREREREREREREREREAKSYDPI 170
H+VK +E ++R E+ +DP
Sbjct: 157 HKVK------------------------QERGPQDRAFNSEK-----------PLPFDPT 181
Query: 171 PPVANDIISKTWLICFDEFQVTDIADAMILKRLFTELFQLGVVVVATSNRAPDDLYKNGL 230
PVA I +++WLICFDEFQVTDIADAMILK LFT LF G+V +ATSNR P+DLYKNGL
Sbjct: 182 LPVAEMIANESWLICFDEFQVTDIADAMILKSLFTHLFNEGIVCIATSNRHPNDLYKNGL 241
Query: 231 QRSNFLPFIDVLKTYCDVASLNSNIDYRSLKANAEESSTKTYFVKNFANEK-KLHGIFKL 289
QRSNF+PFI VL C+VA+++S +DYR + +S YFV + K ++ +FK+
Sbjct: 242 QRSNFIPFIGVLLNRCNVAAMDSGVDYRRIA----QSGDTNYFVTTQTDAKSQMERMFKI 297
Query: 290 LCSQENDIVRPRVITIMGRNVTFNKTCGQILEATFDELCSRDLGSSDYLHICQIFHTVII 349
LCSQENDI+RPR IT GR++TF +TCGQ+L++ F+ELC+R LG SDY+ I Q FHTV+I
Sbjct: 298 LCSQENDIIRPRTITHFGRDLTFQRTCGQVLDSNFEELCNRPLGGSDYIQIGQFFHTVLI 357
Query: 350 RNVPQLNIKLRSQSRRFITLIDALYDNNIRLVISSDVPLNKLFSNEAVIDTHSDEHRMLM 409
+VPQL + L+SQ RRFITLID LYDN +R+VIS++VPL++LFS +DE RMLM
Sbjct: 358 HDVPQLTLLLKSQMRRFITLIDTLYDNRVRVVISAEVPLDQLFSFTDKPKDLADEQRMLM 417
Query: 410 DDLNIKANDGTDANLKSNIFT 430
DDL + D + +++FT
Sbjct: 418 DDLKLG-----DTDTSASVFT 433
>sp|Q3V384|LACE1_MOUSE Lactation elevated protein 1 OS=Mus musculus GN=Lace1 PE=2 SV=1
Length = 480
Score = 359 bits (922), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/405 (45%), Positives = 256/405 (63%), Gaps = 43/405 (10%)
Query: 11 PSKQYYEKLSNNEIQEDKHQEQIVKQLDNVYVSIKNYAPQSKSMFSFFQDKVKQPKGLYI 70
P Y + + E++ED+HQ ++V+ L + +K Y+ + +FS + K PKGLY+
Sbjct: 75 PLDHYDFLIKSQELREDEHQRRVVQCLQKLQEDLKGYSIEEGGLFSKLFSRNKPPKGLYV 134
Query: 71 YGAVGGGKTMLMDIFYESCETKQKQRVHFNKFMLDVHAKIHEVKKILARDKAKSYDPGVP 130
YG VG GKTM+MD+FY ETK+K+RVHF+ FMLDVH +IH +K+ L + KA
Sbjct: 135 YGDVGTGKTMVMDMFYAYVETKRKKRVHFHGFMLDVHRRIHHLKQSLPKRKAGFM----- 189
Query: 131 NRLDVMKEEEEKEREREREREREREREREREREAKSYDPIPPVANDIISKTWLICFDEFQ 190
AKSYDPI P+A +I +T L+CFDEFQ
Sbjct: 190 ---------------------------------AKSYDPIAPIAEEISQETSLLCFDEFQ 216
Query: 191 VTDIADAMILKRLFTELFQLGVVVVATSNRAPDDLYKNGLQRSNFLPFIDVLKTYCDVAS 250
VTDIADAMILK+LF LF+ GVVVVATSNR P+DLYKNGLQR+NF+PFI VLK YCD
Sbjct: 217 VTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCDTLQ 276
Query: 251 LNSNIDYRSLKANAEESSTKTYFVKNFAN-EKKLHGIFKLLCSQENDIVRPRVITIMGRN 309
L+S +DYR + + K Y++ + A+ E + +F L ++ND+ PR++ + GR
Sbjct: 277 LDSGVDYRKREL---APAGKLYYLTSEADVEAVVDKLFDELAQKQNDLTSPRILKVQGRE 333
Query: 310 VTFNKTCGQILEATFDELCSRDLGSSDYLHICQIFHTVIIRNVPQLNIKLRSQSRRFITL 369
+ NK CG + + TF+ELC R LG+SDYL + + F TVIIRN+PQ ++ R+Q+RRFITL
Sbjct: 334 LRLNKACGSVADCTFEELCERPLGASDYLELSKNFDTVIIRNIPQFSLAKRTQARRFITL 393
Query: 370 IDALYDNNIRLVISSDVPLNKLFSNEAVIDTHSDEHRMLMDDLNI 414
ID YD +R++ S+ P++ LF ++ D+ SD+ R+LMDDL +
Sbjct: 394 IDNFYDFKVRIICSASAPISSLFLHQHQ-DSESDQSRILMDDLGL 437
>sp|Q8WV93|LACE1_HUMAN Lactation elevated protein 1 OS=Homo sapiens GN=LACE1 PE=2 SV=2
Length = 481
Score = 349 bits (895), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 176/405 (43%), Positives = 255/405 (62%), Gaps = 43/405 (10%)
Query: 11 PSKQYYEKLSNNEIQEDKHQEQIVKQLDNVYVSIKNYAPQSKSMFSFFQDKVKQPKGLYI 70
P Y + +E+++D+HQ ++++ L ++ +K Y +++ +FS + K P+GLY+
Sbjct: 75 PLDHYDFLIKAHELKDDEHQRRVIQCLQKLHEDLKGYNIEAEGLFSKLFSRSKPPRGLYV 134
Query: 71 YGAVGGGKTMLMDIFYESCETKQKQRVHFNKFMLDVHAKIHEVKKILARDKAKSYDPGVP 130
YG VG GKTM+MD+FY E K+K+RVHF+ FMLDVH +IH +K+ L + K PG
Sbjct: 135 YGDVGTGKTMVMDMFYAYVEMKRKKRVHFHGFMLDVHKRIHRLKQSLPKRK-----PGF- 188
Query: 131 NRLDVMKEEEEKEREREREREREREREREREREAKSYDPIPPVANDIISKTWLICFDEFQ 190
AKSYDPI P+A +I + L+CFDEFQ
Sbjct: 189 --------------------------------MAKSYDPIAPIAEEISEEACLLCFDEFQ 216
Query: 191 VTDIADAMILKRLFTELFQLGVVVVATSNRAPDDLYKNGLQRSNFLPFIDVLKTYCDVAS 250
VTDIADAMILK+LF LF+ GVVVVATSNR P+DLYKNGLQR+NF+PFI VLK YC+
Sbjct: 217 VTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCNTVQ 276
Query: 251 LNSNIDYRSLKANAEESSTKTYFVKNFAN-EKKLHGIFKLLCSQENDIVRPRVITIMGRN 309
L+S IDYR + A + K Y++ + A+ E + +F L ++ND+ RPR++ + GR
Sbjct: 277 LDSGIDYRKRELPA---AGKLYYLTSEADVEAVMDKLFDELAQKQNDLTRPRILKVQGRE 333
Query: 310 VTFNKTCGQILEATFDELCSRDLGSSDYLHICQIFHTVIIRNVPQLNIKLRSQSRRFITL 369
+ NK CG + + TF+ELC R LG+SDYL + + F T+ +RN+PQ + R+Q RRFITL
Sbjct: 334 LRLNKACGTVADCTFEELCERPLGASDYLELSKNFDTIFLRNIPQFTLANRTQGRRFITL 393
Query: 370 IDALYDNNIRLVISSDVPLNKLFSNEAVIDTHSDEHRMLMDDLNI 414
ID YD +R++ S+ P++ LF ++ D+ ++ R+LMDDL +
Sbjct: 394 IDNFYDLKVRIICSASTPISSLFLHQHH-DSELEQSRILMDDLGL 437
>sp|Q32PX9|LACE1_RAT Lactation elevated protein 1 OS=Rattus norvegicus GN=Lace1 PE=2
SV=1
Length = 480
Score = 348 bits (892), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 179/405 (44%), Positives = 248/405 (61%), Gaps = 43/405 (10%)
Query: 11 PSKQYYEKLSNNEIQEDKHQEQIVKQLDNVYVSIKNYAPQSKSMFSFFQDKVKQPKGLYI 70
P Y + E++ D+HQ ++V+ L + +K Y + +FS + K PKGLY+
Sbjct: 75 PLAHYDFLIKAQELKNDEHQRRVVQCLQKLQEDLKGYNIEEGGLFSKLFSRNKPPKGLYV 134
Query: 71 YGAVGGGKTMLMDIFYESCETKQKQRVHFNKFMLDVHAKIHEVKKILARDKAKSYDPGVP 130
YG VG GKTM+MD+FYE E K K+RVHF+ FMLDVH +IH +K+ L + K
Sbjct: 135 YGDVGTGKTMVMDMFYEYVEVKSKRRVHFHGFMLDVHKRIHRLKQSLPKRKVGFM----- 189
Query: 131 NRLDVMKEEEEKEREREREREREREREREREREAKSYDPIPPVANDIISKTWLICFDEFQ 190
AKSYDPI P+A +I + L+CFDEFQ
Sbjct: 190 ---------------------------------AKSYDPIAPIAEEISQEASLLCFDEFQ 216
Query: 191 VTDIADAMILKRLFTELFQLGVVVVATSNRAPDDLYKNGLQRSNFLPFIDVLKTYCDVAS 250
VTDIADAMILK+LF LF+ GVVVVATSNR P+DLYKNGLQR+NF+PFI VLK YC+
Sbjct: 217 VTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCNTVQ 276
Query: 251 LNSNIDYRSLKANAEESSTKTYFVKNFANEKK-LHGIFKLLCSQENDIVRPRVITIMGRN 309
L+S +DYR + + K Y++ + A+ + +F L ++ND+ PR++ + GR
Sbjct: 277 LDSGVDYRKRELT---PAGKLYYLTSEADVGTVMDKLFDELAQKQNDLTSPRILKVQGRE 333
Query: 310 VTFNKTCGQILEATFDELCSRDLGSSDYLHICQIFHTVIIRNVPQLNIKLRSQSRRFITL 369
+ NK CG + + TF+ELC R LG+SDYL + + F TVIIRN+PQ ++ R+Q RRFITL
Sbjct: 334 LRLNKACGTVADCTFEELCERPLGASDYLELSKNFDTVIIRNIPQFSLAKRTQVRRFITL 393
Query: 370 IDALYDNNIRLVISSDVPLNKLFSNEAVIDTHSDEHRMLMDDLNI 414
ID YD +R++ S+ VP++ LF + D+ SD+ R+LMDDL +
Sbjct: 394 IDNFYDFKVRIICSASVPISSLFVYQHQ-DSESDQSRVLMDDLGL 437
>sp|Q5TYS0|LCE1B_DANRE Lactation elevated protein 1 homolog B OS=Danio rerio GN=lace1b
PE=2 SV=1
Length = 503
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 224/355 (63%), Gaps = 44/355 (12%)
Query: 61 KVKQPKGLYIYGAVGGGKTMLMDIFYESCETKQKQRVHFNKFMLDVHAKIHEVKKILARD 120
K P+G YIYG VG GKTMLMD+FY E ++K+RVHFN FMLDVH +IH++K+ L
Sbjct: 148 KPHPPQGYYIYGNVGTGKTMLMDLFYSFVENRRKKRVHFNGFMLDVHRRIHKLKQSL--- 204
Query: 121 KAKSYDPGVPNRLDVMKEEEEKEREREREREREREREREREREAKSYDPIPPVANDIISK 180
P R R + YDPI PVA +I +
Sbjct: 205 ---------PKR---------------------------RIGKMTMYDPIFPVAMEIAEE 228
Query: 181 TWLICFDEFQVTDIADAMILKRLFTELFQLGVVVVATSNRAPDDLYKNGLQRSNFLPFID 240
T LICFDEFQV DIADAMILK+LF LF+ GVVVVATSNR P++LYKNGLQR+ F+PFI
Sbjct: 229 TCLICFDEFQVVDIADAMILKQLFEGLFKCGVVVVATSNRPPEELYKNGLQRAAFVPFIG 288
Query: 241 VLKTYCDVASLNSNIDYRSLKANAEESSTKTYFVKNFAN-EKKLHGIFKLLCSQENDIVR 299
VLK YC + SL++ ID+R+ + + + + Y++ + + E ++ +F+ L ++ND+ R
Sbjct: 289 VLKEYCRIVSLDTGIDFRTREM---KPAGRLYYISSEPDAENAVNALFEELAFRQNDVTR 345
Query: 300 PRVITIMGRNVTFNKTCGQILEATFDELCSRDLGSSDYLHICQIFHTVIIRNVPQLNIKL 359
PRV+ + GR VT ++TCG I + +F ELC + LG+ DYL I + F TVIIRNVP L + +
Sbjct: 346 PRVLNVQGREVTLSRTCGTIADCSFQELCEQPLGAGDYLEIARCFDTVIIRNVPYLQLGM 405
Query: 360 RSQSRRFITLIDALYDNNIRLVISSDVPLNKLFSNEAVIDTHSDEHRMLMDDLNI 414
+ Q+RRF TLID YD +R+V+ +D PL++L ++ + R+++D+L +
Sbjct: 406 KDQARRFTTLIDNFYDQKVRVVMLADAPLDRLL-DQGQMTGEEARDRLMLDELGL 459
>sp|O42895|YBQ2_SCHPO Uncharacterized protein C115.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC115.02c PE=3 SV=1
Length = 454
Score = 212 bits (540), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 210/421 (49%), Gaps = 81/421 (19%)
Query: 5 TSDSSLPSKQYYEKLSNNEIQEDKHQEQIVKQLDNVYVSIKNYA---------PQSK-SM 54
T+ + P + Y +K+++ + D +QE VK ++ +Y +++Y P K S+
Sbjct: 30 TTFHNTPIEVYNKKVNDGVWKRDPYQETAVKAINRLYTELESYTQPPITQDSMPAEKGSI 89
Query: 55 FSFFQDKVKQ------------------PKGLYIYGAVGGGKTMLMDIFYESCE--TKQK 94
S+ K PKG+Y+YG VG GKT LMD+FY + +
Sbjct: 90 LSWISPLKKMFSRKKSPTLTSSLPVPGMPKGIYLYGDVGCGKTALMDLFYHNLPPNVTRS 149
Query: 95 QRVHFNKFMLDVHAKIHEVKKILARDKAKSYDPGVPNRLDVMKEEEEKERERERERERER 154
QR+HF+ FM+ VH H+++
Sbjct: 150 QRIHFHAFMMQVHRTSHDLQ---------------------------------------- 169
Query: 155 EREREREREAKSYDPIPPVANDIISKTWLICFDEFQVTDIADAMILKRLFTELFQLGVVV 214
+R D I +A+ I +T ++CFDE QVTD+ADA++L+RLF L + GVV+
Sbjct: 170 ------DRYGFEIDFIDHIASGIAKETTVLCFDELQVTDVADALLLRRLFEALMKYGVVI 223
Query: 215 VATSNRAPDDLYKNGLQRSNFLPFIDVLKTYCDVASLNSNIDYRSLKANAEESSTKTYFV 274
TSNRAP DLYKNG+QR +F+P I +L+ V L+S DYR LK+ E+ T Y
Sbjct: 224 FITSNRAPSDLYKNGIQRESFIPCIKLLEHRLQVICLDSPNDYRRLKSKTED--TYLYPA 281
Query: 275 KNFANEKKLHGIFKLLC-SQENDIVRPRVITIMGRNVTFNKTCGQILEATFDELCSRDLG 333
+ +K L F LC + E D + + GR + K G + TF++LC
Sbjct: 282 NSPEVKKALENWF--LCYADEKDPAHQDEVEVFGRKIIVPKASGNVAWFTFEQLCGEPKS 339
Query: 334 SSDYLHICQIFHTVIIRNVPQLNIKLRSQSRRFITLIDALYDNNIRLVISSDVPLNKLFS 393
++DYL + +H I+ ++P+L+I+ + RFIT IDALYD + +L++SS+VP+ +++
Sbjct: 340 AADYLSLASRYHVFIVSDIPKLSIESKDLIHRFITFIDALYDTHGKLILSSEVPVQEIYP 399
Query: 394 N 394
Sbjct: 400 T 400
>sp|P64612|YHCM_ECOLI Uncharacterized protein YhcM OS=Escherichia coli (strain K12)
GN=yhcM PE=1 SV=1
Length = 375
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 204/404 (50%), Gaps = 76/404 (18%)
Query: 8 SSLPSKQYYEKLSNNEIQEDKHQEQIVKQLDNVYVSIKNYAPQSK----------SMFSF 57
S P+ QY + L+ Q D Q++ V +L+ +Y + N P + ++
Sbjct: 3 SVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGK 62
Query: 58 FQDKVKQP-KGLYIYGAVGGGKTMLMDIFYESCETKQKQRVHFNKFMLDVHAKIHEVKKI 116
+D P +GLY++G VG GKT LMD+FY+S ++KQR+HF++FML VH ++ ++
Sbjct: 63 REDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRVHEELTALQG- 121
Query: 117 LARDKAKSYDPGVPNRLDVMKEEEEKEREREREREREREREREREREAKSYDPIPPVAND 176
DP+ +A+
Sbjct: 122 -------------------------------------------------QTDPLEIIADR 132
Query: 177 IISKTWLICFDEFQVTDIADAMILKRLFTELFQLGVVVVATSNRAPDDLYKNGLQRSNFL 236
++T ++CFDEF V+DI DAM+L L LF G+ +VATSN PD+LY+NGLQR+ FL
Sbjct: 133 FKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRNGLQRARFL 192
Query: 237 PFIDVLKTYCDVASLNSNIDYRSLKANAEESSTKTYFVKNFANEKKLHGIFKLLCS---- 292
P ID +K +CDV ++++ +DYR + T+ + + +++ + KL +
Sbjct: 193 PAIDAIKQHCDVMNVDAGVDYRL------RTLTQAHLWLSPLHDETRAQMDKLWLALAGG 246
Query: 293 -QENDIVRPRVITIMGRNVTFNKTCGQILEATFDELCSRDLGSSDYLHICQIFHTVIIRN 351
+EN + I R + Q L +F LC DY+ + ++FHTV++ +
Sbjct: 247 KRENS----PTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFD 302
Query: 352 VPQLNIKLRSQSRRFITLIDALYDNNIRLVISSDVPLNKLFSNE 395
VP + + S++RRFI L+D Y+ +++LV+S++VPL +++ +
Sbjct: 303 VPVMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGD 346
>sp|P64613|YHCM_ECO57 Uncharacterized protein YhcM OS=Escherichia coli O157:H7 GN=yhcM
PE=3 SV=1
Length = 375
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 204/404 (50%), Gaps = 76/404 (18%)
Query: 8 SSLPSKQYYEKLSNNEIQEDKHQEQIVKQLDNVYVSIKNYAPQSK----------SMFSF 57
S P+ QY + L+ Q D Q++ V +L+ +Y + N P + ++
Sbjct: 3 SVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGK 62
Query: 58 FQDKVKQP-KGLYIYGAVGGGKTMLMDIFYESCETKQKQRVHFNKFMLDVHAKIHEVKKI 116
+D P +GLY++G VG GKT LMD+FY+S ++KQR+HF++FML VH ++ ++
Sbjct: 63 REDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRVHEELTALQG- 121
Query: 117 LARDKAKSYDPGVPNRLDVMKEEEEKEREREREREREREREREREREAKSYDPIPPVAND 176
DP+ +A+
Sbjct: 122 -------------------------------------------------QTDPLEIIADR 132
Query: 177 IISKTWLICFDEFQVTDIADAMILKRLFTELFQLGVVVVATSNRAPDDLYKNGLQRSNFL 236
++T ++CFDEF V+DI DAM+L L LF G+ +VATSN PD+LY+NGLQR+ FL
Sbjct: 133 FKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRNGLQRARFL 192
Query: 237 PFIDVLKTYCDVASLNSNIDYRSLKANAEESSTKTYFVKNFANEKKLHGIFKLLCS---- 292
P ID +K +CDV ++++ +DYR + T+ + + +++ + KL +
Sbjct: 193 PAIDAIKQHCDVMNVDAGVDYRL------RTLTQAHLWLSPLHDETRAQMDKLWLALAGG 246
Query: 293 -QENDIVRPRVITIMGRNVTFNKTCGQILEATFDELCSRDLGSSDYLHICQIFHTVIIRN 351
+EN + I R + Q L +F LC DY+ + ++FHTV++ +
Sbjct: 247 KRENS----PTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFD 302
Query: 352 VPQLNIKLRSQSRRFITLIDALYDNNIRLVISSDVPLNKLFSNE 395
VP + + S++RRFI L+D Y+ +++LV+S++VPL +++ +
Sbjct: 303 VPVMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGD 346
>sp|P32317|AFG1_YEAST Protein AFG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=AFG1 PE=1 SV=1
Length = 509
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 213/450 (47%), Gaps = 106/450 (23%)
Query: 4 TTSDSSLPSKQYYEKLSN-NEIQEDKHQEQIVKQLDNVYVSIKNYAPQS----------- 51
T S+ L Q Y++L ++++D +Q I+ L ++Y S+ Y P
Sbjct: 28 TKSNKCLTPLQEYDRLVKLGKLRDDTYQRGIISSLGDLYDSLVKYVPPVVKTPNAVDQVG 87
Query: 52 ------KSMFSFFQDK-------VKQ-----PKGLYIYGAVGGGKTMLMDIFYESCETK- 92
KS+FS + K V + P+G+Y+YG VG GKTMLMD+FY +
Sbjct: 88 GWLNGLKSVFSRGKPKNIGAYVDVSKIGNSIPRGVYLYGDVGCGKTMLMDLFYTTIPNHL 147
Query: 93 QKQRVHFNKFMLDVHAKIHEVKKILARDKAKSYDPGVPNRLDVMKEEEEKERERERERER 152
K+R+HF++FM VH + HE+ R
Sbjct: 148 TKKRIHFHQFMQYVHKRSHEI-------------------------------------VR 170
Query: 153 EREREREREREAKSYDPIPPVANDIISKTWLICFDEFQVTDIADAMILKRLFTELFQ--L 210
E+ + + + K D +P +A +I + + ++CFDEFQVTD+ADAMIL+RL T L
Sbjct: 171 EQNLKELGDAKGKEIDTVPFLAAEIANNSHVLCFDEFQVTDVADAMILRRLMTALLSDDY 230
Query: 211 GVVVVATSNRAPDDLYKNGLQRSNFLPFIDVLKTYCDVASLNSNIDYR------------ 258
GVV+ ATSNR PD+LY NG+QR +F+P I+++K V LNS DYR
Sbjct: 231 GVVLFATSNRHPDELYINGVQRQSFIPCIELIKHRTKVIFLNSPTDYRKIPRPVSSVYYF 290
Query: 259 ----SLKANAEESSTK---------TYFVKNFANEKKL--HGIFKLLCSQENDIVRPRVI 303
S+K ++E T+ YF + + H + K +
Sbjct: 291 PSDTSIKYASKECKTRRETHIKEWYNYFAQASHTDDSTDSHTVHKTFYDYP--------L 342
Query: 304 TIMGRNVTFNK-TCGQILEATFDELCSRDLGSSDYLHICQIFHTVIIRNVPQLNIKLRSQ 362
TI GR K T ++ + TF +LC L + DYL + + F I+ ++P L+I +R +
Sbjct: 343 TIWGREFKVPKCTPPRVAQFTFKQLCGEPLAAGDYLTLAKNFEAFIVTDIPYLSIYVRDE 402
Query: 363 SRRFITLIDALYDNNIRLVISSDVPLNKLF 392
RRFIT +DA+YD+ +L + + LF
Sbjct: 403 VRRFITFLDAVYDSGGKLATTGAADFSSLF 432
>sp|Q6PGZ3|MIPT3_DANRE TRAF3-interacting protein 1 OS=Danio rerio GN=traf3ip1 PE=2 SV=1
Length = 629
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 23/25 (92%)
Query: 141 EKEREREREREREREREREREREAK 165
EKERERE++R RE+ERER+++R+ K
Sbjct: 229 EKEREREKDRNREKERERDKDRDKK 253
Score = 32.0 bits (71), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%), Gaps = 5/50 (10%)
Query: 119 RDKAKSYDPGVPNRLDVMKEEE-EKEREREREREREREREREREREAKSY 167
RDK KS D D +E+E E+E++R RE+ERER+++R++++E +S+
Sbjct: 214 RDKDKSRD----REKDKTREKEREREKDRNREKERERDKDRDKKKERESH 259
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,082,747
Number of Sequences: 539616
Number of extensions: 6687071
Number of successful extensions: 76840
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 299
Number of HSP's that attempted gapping in prelim test: 56973
Number of HSP's gapped (non-prelim): 12410
length of query: 438
length of database: 191,569,459
effective HSP length: 120
effective length of query: 318
effective length of database: 126,815,539
effective search space: 40327341402
effective search space used: 40327341402
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)