BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3180
(346 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 20/144 (13%)
Query: 185 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 239
K + + D DGD +T E + + +P E A +RD+ M +ID+D +G V
Sbjct: 13 KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTE-AELRDM-----MSEIDRDGNGTVDFP 66
Query: 240 EYIGDMFRG-GDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSD 298
E++G M R DTD +EE+ +E F ++ DK+G+GF+ E+++ + SD
Sbjct: 67 EFLGMMARKMKDTDNEEEI-------REAFRVF-DKDGNGFVSAAELRHVMTRLGEKLSD 118
Query: 299 AEARHLIYESDSDADQKLTKDEIL 322
E +I +D+D D ++ +E +
Sbjct: 119 EEVDEMIRAADTDGDGQVNYEEFV 142
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 185 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 239
K + + D DGD +T +E + + +P E A ++D++ ++D D +G +
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGNGTIDFP 67
Query: 240 EYIGDMFRG-GDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSD 298
E++ M R DTD +EEL KE F ++ DK+ +GF+ E+++ + +D
Sbjct: 68 EFLNLMARKMKDTDSEEEL-------KEAFRVF-DKDQNGFISAAELRHVMTNLGEKLTD 119
Query: 299 AEARHLIYESDSDADQKLTKDEIL 322
E +I E+D D D ++ DE +
Sbjct: 120 EEVDEMIREADVDGDGQINYDEFV 143
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 253 GDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDA 312
D+ D + KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D
Sbjct: 2 ADQLTEDQISEFKEAFSLF-DKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 313 DQKLTKDEIL 322
+ + E L
Sbjct: 61 NGTIDFPEFL 70
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 20/144 (13%)
Query: 185 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 239
K + + D DGD +T EE A+ + +P E ++D++ ++D D +G +
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTE-EELQDMI-----SEVDADGNGTIEFD 66
Query: 240 EYIGDMFRG-GDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSD 298
E++ M + DTD +EEL KE F ++ DK+ +G++ E+++ ++ +D
Sbjct: 67 EFLSLMAKKVKDTDAEEEL-------KEAFKVF-DKDQNGYISASELRHVMINLGEKLTD 118
Query: 299 AEARHLIYESDSDADQKLTKDEIL 322
E +I E+D D D ++ +E +
Sbjct: 119 EEVEQMIKEADLDGDGQVNYEEFV 142
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 249 GDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYES 308
D +E++ D+ KE F ++ DK+GDG + EE+ I D + ++ E + +I E
Sbjct: 1 ADILSEEQIVDF----KEAFGLF-DKDGDGCITVEELATVIRSLDQNPTEEELQDMISEV 55
Query: 309 DSDADQKLTKDEILA 323
D+D + + DE L+
Sbjct: 56 DADGNGTIEFDEFLS 70
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 185 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 239
K + + D DGD +T +E + + +P E A ++D++ ++D D +G +
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGNGTIDFP 67
Query: 240 EYIGDMFRG-GDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSD 298
E++ M R DTD +EEL KE F ++ DK+ +GF+ E+++ + +D
Sbjct: 68 EFLNLMARKMKDTDSEEEL-------KEAFRVF-DKDQNGFISAAELRHVMTNLGEKLTD 119
Query: 299 AEARHLIYESDSDADQKLTKDEIL 322
E +I E+D D D ++ +E +
Sbjct: 120 EEVDEMIREADVDGDGQINYEEFV 143
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 259 DWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTK 318
D + KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + +
Sbjct: 8 DQISEFKEAFSLF-DKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 319 DEIL 322
E L
Sbjct: 67 PEFL 70
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 28/141 (19%)
Query: 110 DIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAK 169
D++GD A++ EE +F+ + L+ + + ID D +G E+D E AK
Sbjct: 10 DVNGDGAVSYEEVKAFVSKKRAIKNEQLLQL-IFKSIDADGNG--------EIDQNEFAK 60
Query: 170 DEDQGFSYKNMLNRD--------KRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVV 221
Y ++ +D K + + D+DGD LT+EE SF V
Sbjct: 61 ------FYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK-----V 109
Query: 222 VETMEDIDKDKDGKVSLREYI 242
E + D + DG ++L E++
Sbjct: 110 AEQVMKADANGDGYITLEEFL 130
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 24/127 (18%)
Query: 20 IDKDKDGFVSKEELKEWIQFTQKRYIHND--VESQWRTHNPEDKEKITWDEYREKVYGFL 77
ID + DG VS EE+K ++ ++KR I N+ ++ +++ + + +I +E+ K YG +
Sbjct: 9 IDVNGDGAVSYEEVKAFV--SKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA-KFYGSI 65
Query: 78 DEVDAA-------------------ELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALT 118
D + +L K+E F K+ + + + AD +GD +T
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYIT 125
Query: 119 REEFASF 125
EEF F
Sbjct: 126 LEEFLEF 132
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 110 DIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDA-AELA 168
D DG+ + + EFA F + +D+ DK G L + ++VD +L
Sbjct: 46 DADGNGEIDQNEFAKFYGSIQG------------QDLSDDKIGLKVLYKLMDVDGDGKLT 93
Query: 169 KDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASF 207
K+E F K+ + + + AD +GD +T EEF F
Sbjct: 94 KEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEF 132
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 28/141 (19%)
Query: 110 DIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAK 169
D++GD A++ EE +F+ + L+ + + ID D +G E+D E AK
Sbjct: 10 DVNGDGAVSYEEVKAFVSKKRAIKNEQLLQL-IFKSIDADGNG--------EIDQNEFAK 60
Query: 170 DEDQGFSYKNMLNRD--------KRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVV 221
Y ++ +D K + + D+DGD LT+EE SF V
Sbjct: 61 ------FYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK-----V 109
Query: 222 VETMEDIDKDKDGKVSLREYI 242
E + D + DG ++L E++
Sbjct: 110 AEQVMKADANGDGYITLEEFL 130
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 24/127 (18%)
Query: 20 IDKDKDGFVSKEELKEWIQFTQKRYIHND--VESQWRTHNPEDKEKITWDEYREKVYGFL 77
ID + DG VS EE+K ++ ++KR I N+ ++ +++ + + +I +E+ K YG +
Sbjct: 9 IDVNGDGAVSYEEVKAFV--SKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA-KFYGSI 65
Query: 78 DEVDAA-------------------ELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALT 118
D + +L K+E F K+ + + + AD +GD +T
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYIT 125
Query: 119 REEFASF 125
EEF F
Sbjct: 126 LEEFLEF 132
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 110 DIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDA-AELA 168
D DG+ + + EFA F + +D+ DK G L + ++VD +L
Sbjct: 46 DADGNGEIDQNEFAKFYGSIQG------------QDLSDDKIGLKVLYKLMDVDGDGKLT 93
Query: 169 KDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASF 207
K+E F K+ + + + AD +GD +T EEF F
Sbjct: 94 KEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEF 132
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 99 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLRE 158
+ R +R+ D+D +L+ EEF S PE ++ +V ++ D D +G+V +E
Sbjct: 19 IKRLGKRFKKLDLDNSGSLSVEEFMSL--PE---LQQNPLVQRVIDIFDTDGNGEVDFKE 73
Query: 159 YIE-VDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
+IE V + D++Q + + + D+D D ++ E L +++
Sbjct: 74 FIEGVSQFSVKGDKEQKLRFA---------FRIYDMDKDGYISNGELFQVLKMMVGNNLK 124
Query: 218 DL----VVVETMEDIDKDKDGKVSLREYI 242
D +V +T+ + DKD DG++S E+
Sbjct: 125 DTQLQQIVDKTIINADKDGDGRISFEEFC 153
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 99 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLRE 158
+ R +R+ D+D +L+ EEF S PE ++ +V ++ D D +G+V +E
Sbjct: 20 IKRLGKRFKKLDLDNSGSLSVEEFMSL--PE---LQQNPLVQRVIDIFDTDGNGEVDFKE 74
Query: 159 YIE-VDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
+IE V + D++Q + + + D+D D ++ E L +++
Sbjct: 75 FIEGVSQFSVKGDKEQKLRFA---------FRIYDMDKDGYISNGELFQVLKMMVGNNLK 125
Query: 218 DL----VVVETMEDIDKDKDGKVSLREYI 242
D +V +T+ + DKD DG++S E+
Sbjct: 126 DTQLQQIVDKTIINADKDGDGRISFEEFC 154
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 99 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLRE 158
+ R +R+ D+D +L+ EEF S PE ++ +V ++ D D +G+V +E
Sbjct: 5 IKRLGKRFKKLDLDNSGSLSVEEFMSL--PE---LQQNPLVQRVIDIFDTDGNGEVDFKE 59
Query: 159 YIE-VDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
+IE V + D++Q + + + D+D D ++ E L +++
Sbjct: 60 FIEGVSQFSVKGDKEQKLRFA---------FRIYDMDKDGYISNGELFQVLKMMVGNNLK 110
Query: 218 DL----VVVETMEDIDKDKDGKVSLREYI 242
D +V +T+ + DKD DG++S E+
Sbjct: 111 DTQLQQIVDKTIINADKDGDGRISFEEFC 139
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 99 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLRE 158
+ R +R+ D+D +L+ EEF S PE ++ +V ++ D D +G+V +E
Sbjct: 6 IKRLGKRFKKLDLDNSGSLSVEEFMSL--PE---LQQNPLVQRVIDIFDTDGNGEVDFKE 60
Query: 159 YIE-VDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
+IE V + D++Q + + + D+D D ++ E L +++
Sbjct: 61 FIEGVSQFSVKGDKEQKLRFA---------FRIYDMDKDGYISNGELFQVLKMMVGNNLK 111
Query: 218 DL----VVVETMEDIDKDKDGKVSLREYI 242
D +V +T+ + DKD DG++S E+
Sbjct: 112 DTQLQQIVDKTIINADKDGDGRISFEEFC 140
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 171 EDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS---FLHPEETAHMRDLVVVETMED 227
E + F + M+ K +D+ D DG ++ +E + L T D ++ E+
Sbjct: 9 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII----EE 64
Query: 228 IDKDKDGKVSLREYIGDMFRGGDTDG----DEELPDWVKNEKEQFAMYRDKNGDGFMDEE 283
+D+D G + E++ M R D +EEL D F ++ DKN DGF+D E
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADC-------FRIF-DKNADGFIDIE 116
Query: 284 EVKNWILPPDFDH-SDAEARHLIYESDSDADQKLTKDEIL 322
E+ IL +H ++ + L+ +SD + D ++ DE L
Sbjct: 117 EL-GEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DGF+ EEL E ++ T + D+E + + + +I +DE+ + + G
Sbjct: 106 DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 171 EDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS---FLHPEETAHMRDLVVVETMED 227
E + F + M+ K +D+ D DG ++ +E + L T D ++ E+
Sbjct: 6 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII----EE 61
Query: 228 IDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYR--DKNGDGFMDEEEV 285
+D+D G + E++ M R D K+E+E +R DKN DGF+D EE+
Sbjct: 62 VDEDGSGTIDFEEFLVMMVRQMKEDA------KGKSEEELANCFRIFDKNADGFIDIEEL 115
Query: 286 KNWILPPDFDH-SDAEARHLIYESDSDADQKLTKDEIL 322
IL +H ++ + L+ +SD + D ++ DE L
Sbjct: 116 -GEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFL 152
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DGF+ EEL E ++ T + D+E + + + +I +DE+ + + G
Sbjct: 103 DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 157
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 171 EDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS---FLHPEETAHMRDLVVVETMED 227
E + F + M+ K +D+ D DG ++ +E + L T D ++ E+
Sbjct: 9 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII----EE 64
Query: 228 IDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYR--DKNGDGFMDEEEV 285
+D+D G + E++ M R D K+E+E +R DKN DGF+D EE+
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQMKEDAKG------KSEEELANCFRIFDKNADGFIDIEEL 118
Query: 286 KNWILPPDFDH-SDAEARHLIYESDSDADQKLTKDEIL 322
IL +H ++ + L+ +SD + D ++ DE L
Sbjct: 119 -GEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DGF+ EEL E ++ T + D+E + + + +I +DE+ + + G
Sbjct: 106 DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 171 EDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS---FLHPEETAHMRDLVVVETMED 227
E + F + M+ K +D+ D DG ++ +E + L T D ++ E+
Sbjct: 9 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII----EE 64
Query: 228 IDKDKDGKVSLREYIGDMFRGGDTDG----DEELPDWVKNEKEQFAMYRDKNGDGFMDEE 283
+D+D G + E++ M R D +EEL D F ++ DKN DGF+D E
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDC-------FRIF-DKNADGFIDIE 116
Query: 284 EVKNWILPPDFDH-SDAEARHLIYESDSDADQKLTKDEIL 322
E+ IL +H ++ + L+ +SD + D ++ DE L
Sbjct: 117 EL-GEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DGF+ EEL E ++ T + D+E + + + +I +DE+ + + G
Sbjct: 106 DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 110 DIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAA---E 166
D +GD +++ EE +F+ + L+ + + ID D +G++ L E+ + AA +
Sbjct: 10 DANGDGSVSYEEVKAFVSSKRPIKNEQLLQL-IFKAIDIDGNGEIDLAEFTKFAAAVKEQ 68
Query: 167 LAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETME 226
DE G K + + D DGD LT+EE +F ++ + + VV+ +
Sbjct: 69 DLSDEKVGL---------KILYKLMDADGDGKLTKEEVTTFF--KKFGYEK---VVDQIM 114
Query: 227 DIDKDKDGKVSLREYIG 243
D + DG ++L E++
Sbjct: 115 KADANGDGYITLEEFLA 131
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 23/147 (15%)
Query: 16 IVDKIDKDKDGFVSKEELKEWIQFTQKRYIHND--VESQWRTHNPEDKEKITWDEYREKV 73
+ ++D + DG VS EE+K ++ + KR I N+ ++ ++ + + +I E+ +
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFV--SSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTK-- 60
Query: 74 YGFLDEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAH 133
F V +L+ DE G K + + D DGD LT+EE +F ++ +
Sbjct: 61 --FAAAVKEQDLS-DEKVGL---------KILYKLMDADGDGKLTKEEVTTFF--KKFGY 106
Query: 134 MRDLVVVETMEDIDKDKDGKVSLREYI 160
+ VV+ + D + DG ++L E++
Sbjct: 107 EK---VVDQIMKADANGDGYITLEEFL 130
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 171 EDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS---FLHPEETAHMRDLVVVETMED 227
E + F + M+ K +D+ D DG ++ +E + L T D ++ E+
Sbjct: 9 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII----EE 64
Query: 228 IDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYR--DKNGDGFMDEEEV 285
+D+D G + E++ M R D K+E+E +R DKN DGF+D EE+
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQMKEDAKG------KSEEELANCFRIFDKNADGFIDIEEL 118
Query: 286 KNWILPPDFDHSDAE-ARHLIYESDSDADQKLTKDEIL 322
IL +H E L+ +SD + D ++ DE L
Sbjct: 119 -GEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DGF+ EEL E ++ T + I D+E + + + +I +DE+ + + G
Sbjct: 106 DKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 89 EDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS---FLHPEETAHMRDLVVVETMED 145
E + F + M+ K +D+ D DG ++ +E + L T D ++ E+
Sbjct: 9 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII----EE 64
Query: 146 IDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFA 205
+D+D G + E++ + ++ K++ +G S + + N + + D + D + EE
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQM-KEDAKGKSEEELANC----FRIFDKNADGFIDIEELG 119
Query: 206 SFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYI 242
L H+ + + + M+D DK+ DG++ E++
Sbjct: 120 EILRAT-GEHVIEEDIEDLMKDSDKNNDGRIDFDEFL 155
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 171 EDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS---FLHPEETAHMRDLVVVETMED 227
E + + + M+ K +D+ D DG ++ +E + L T D ++ E+
Sbjct: 6 EARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAII----EE 61
Query: 228 IDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYR--DKNGDGFMDEEEV 285
+D+D G + E++ M R D K+E+E ++R D+N DG++D EE+
Sbjct: 62 VDEDGSGTIDFEEFLVMMVRQMKEDAKG------KSEEELAELFRIFDRNADGYIDAEEL 115
Query: 286 KNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
+D E L+ + D + D ++ DE L
Sbjct: 116 AEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 89 EDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS---FLHPEETAHMRDLVVVETMED 145
E + + + M+ K +D+ D DG ++ +E + L T D ++ E+
Sbjct: 6 EARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAII----EE 61
Query: 146 IDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFA 205
+D+D G + E++ + ++ K++ +G S + + + + D + D + EE A
Sbjct: 62 VDEDGSGTIDFEEFLVMMVRQM-KEDAKGKSEEEL----AELFRIFDRNADGYIDAEELA 116
Query: 206 SFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYI 242
H+ D + M+D DK+ DG++ E++
Sbjct: 117 EIFRAS-GEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 171 EDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS---FLHPEETAHMRDLVVVETMED 227
E + + + M+ K +D+ D DG ++ +E + L T D ++ E+
Sbjct: 6 EARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAII----EE 61
Query: 228 IDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYR--DKNGDGFMDEEEV 285
+D+D G + E++ M R D K+E+E +R D+N DG++D EE+
Sbjct: 62 VDEDGSGTIDFEEFLVMMVRQMKEDAKG------KSEEELAECFRIFDRNADGYIDAEEL 115
Query: 286 KNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
+D E L+ + D + D ++ DE L
Sbjct: 116 AEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 89 EDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS---FLHPEETAHMRDLVVVETMED 145
E + + + M+ K +D+ D DG ++ +E + L T D ++ E+
Sbjct: 6 EARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAII----EE 61
Query: 146 IDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFA 205
+D+D G + E++ + ++ K++ +G S + + + + D + D + EE A
Sbjct: 62 VDEDGSGTIDFEEFLVMMVRQM-KEDAKGKSEEEL----AECFRIFDRNADGYIDAEELA 116
Query: 206 SFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYI 242
H+ D + M+D DK+ DG++ E++
Sbjct: 117 EIFRAS-GEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 117 LTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFS 176
LT EF F + + + V + E D +KDG + EY+ + L DQ
Sbjct: 32 LTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQ--- 88
Query: 177 YKNMLNRDKRRW--DVADIDGDRALTREEFASFLHPEETAHMRDLVVVE------TMEDI 228
K RW + D+DG+ + R E + + + + + + I
Sbjct: 89 --------KLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKI 140
Query: 229 DKDKDGKVSLREYI 242
D + DG++SL E++
Sbjct: 141 DINGDGELSLEEFM 154
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 185 KRRWDVADIDGDRALTREEFASF-----LHPEETAHMRDLVVVETMEDIDKDKDGKVSLR 239
K + + D D + +++ E A+ L P E A + DL M +ID D + ++
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSE-AEVNDL-----MNEIDVDGNHQIEFS 66
Query: 240 EYIGDMFRG-GDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSD 298
E++ M R D ++EL E F ++ DKNGDG + E+K+ + +D
Sbjct: 67 EFLALMSRQLKSNDSEQELL-------EAFKVF-DKNGDGLISAAELKHVLTSIGEKLTD 118
Query: 299 AEARHLIYE 307
AE ++ E
Sbjct: 119 AEVDDMLRE 127
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE FA++ DK+ +G + E+ + S+AE L+ E D D + ++ E LA
Sbjct: 13 KEAFALF-DKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 185 KRRWDVADIDGDRALTREEFASF-----LHPEETAHMRDLVVVETMEDIDKDKDGKVSLR 239
K + + D D + +++ E A+ L P E A + DL M +ID D + ++
Sbjct: 14 KEAFALFDKDNNGSISSSELATVMRSLGLSPSE-AEVNDL-----MNEIDVDGNHQIEFS 67
Query: 240 EYIGDMFRG-GDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSD 298
E++ M R D ++EL E F ++ DKNGDG + E+K+ + +D
Sbjct: 68 EFLALMSRQLKSNDSEQELL-------EAFKVF-DKNGDGLISAAELKHVLTSIGEKLTD 119
Query: 299 AEARHLIYE 307
AE ++ E
Sbjct: 120 AEVDDMLRE 128
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE FA++ DK+ +G + E+ + S+AE L+ E D D + ++ E LA
Sbjct: 14 KEAFALF-DKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 71
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 20/122 (16%)
Query: 185 KRRWDVADIDGDRALTREEFASF-----LHPEETAHMRDLVVVETMEDIDKDKDGKVSLR 239
K + + D D + +++ E A+ L P E A + DL M +ID D + ++
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSE-AEVNDL-----MNEIDVDGNHQIEFS 66
Query: 240 EYIGDMFRG-GDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSD 298
E++ M R D ++EL E F ++ DKNGDG + E+K+ + +D
Sbjct: 67 EFLALMSRQLKSNDSEQELL-------EAFKVF-DKNGDGLISAAELKHVLTSIGEKLTD 118
Query: 299 AE 300
AE
Sbjct: 119 AE 120
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE FA++ DK+ +G + E+ + S+AE L+ E D D + ++ E LA
Sbjct: 13 KEAFALF-DKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F ++ DK+GDG + EE+ I D + ++ E + +I E D+D + + DE L+
Sbjct: 13 KEAFGLF-DKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F ++ DK+GDG + EE+ I D + ++ E + +I E D+D + + DE L+
Sbjct: 13 KEAFGLF-DKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DGF+ EEL E ++ T + I D+E + + + +I +DE+ + + G
Sbjct: 20 DKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 74
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 103 KRRWDVADIDGDRALTREEFASFLHPE--ETAHMRDLVVVETMEDIDKDKDGKVSLREYI 160
K + V D DG +T+E+ L + + + DL+ ++ ID D GK+ E+I
Sbjct: 55 KSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLL----LDQIDSDGSGKIDYTEFI 110
Query: 161 EVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLH---PEETAHMR 217
AA L + + S K + + V D+D D +T E A L+ + R
Sbjct: 111 ---AAALDRKQ---LSKKLIYCA----FRVFDVDNDGEITTAELAHILYNGNKKGNITQR 160
Query: 218 DLVVVETM-EDIDKDKDGKVSLREY 241
D+ V+ M D+DK+ DGK+ E+
Sbjct: 161 DVNRVKRMIRDVDKNNDGKIDFHEF 185
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 8 IDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWD 67
++K K +V +D+D G+++KE+LK+ ++ + +N + + + KI +
Sbjct: 51 VEKLKSTFLV--LDEDGKGYITKEQLKKGLEKDGLKLPYN-FDLLLDQIDSDGSGKIDYT 107
Query: 68 EYREKVYGFLDEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLH 127
E+ + AA K + Y + V D+D D +T E A L+
Sbjct: 108 EF----------IAAALDRKQLSKKLIY--------CAFRVFDVDNDGEITTAELAHILY 149
Query: 128 ---PEETAHMRDLVVVETM-EDIDKDKDGKVSLREYIEV 162
+ RD+ V+ M D+DK+ DGK+ E+ E+
Sbjct: 150 NGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEM 188
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ EELK +Q T + +D+E + + + +I +DE+ E + G
Sbjct: 105 DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 210 PEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGG--DTDG--DEELPDWVKNEK 265
PEE M D ++D+D G V E++ M R D+ G +EEL D
Sbjct: 54 PEELQEMID--------EVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDL----- 100
Query: 266 EQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
F M+ DKN DG++D EE+K + ++ + L+ + D + D ++ DE L
Sbjct: 101 --FRMF-DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ EELK +Q T + +D+E + + + +I +DE+ E + G
Sbjct: 105 DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 210 PEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGG--DTDG--DEELPDWVKNEK 265
PEE M D ++D+D G V E++ M R D+ G +EEL D
Sbjct: 54 PEELQEMID--------EVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDL----- 100
Query: 266 EQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
F M+ DKN DG++D EE+K + ++ + L+ + D + D ++ DE L
Sbjct: 101 --FRMF-DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ EELK +Q T + +D+E + + + +I +DE+ E + G
Sbjct: 25 DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ EELK +Q T + +D+E + + + +I +DE+ E + G
Sbjct: 105 DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 210 PEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGG--DTDG--DEELPDWVKNEK 265
PEE M D ++D+D G V E++ M R D+ G +EEL D
Sbjct: 54 PEELQEMID--------EVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDL----- 100
Query: 266 EQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
F M+ DKN DG++D EE+K + ++ + L+ + D + D ++ DE L
Sbjct: 101 --FRMF-DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ EELK +Q T + +D+E + + + +I +DE+ E + G
Sbjct: 17 DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 71
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ EELK +Q T + +D+E + + + +I +DE+ E + G
Sbjct: 15 DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 69
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 20 IDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ EELK +Q T + +D+E + + + +I +DE+ E + G
Sbjct: 19 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 74
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 15 LIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVY 74
++ D ID DKDG+VS E K ++Q + + + T + +I+ DE+ V
Sbjct: 106 IMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
Query: 75 GFLDEVDAAELA 86
FL ++ LA
Sbjct: 166 DFLFGLEETALA 177
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Query: 185 KRRWDVADIDGDRALTREEFASF-----LHPEETAHMRDLVVVETMEDIDKDKDGKVSLR 239
K + + D D +++ E A+ L P E A + DL M +ID D + +
Sbjct: 14 KEAFALFDKDNSGSISASELATVMRSLGLSPSE-AEVADL-----MNEIDVDGNHAIEFS 67
Query: 240 EYIGDMFRGGDT-DGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSD 298
E++ M R D ++EL E F ++ DKNGDG + E+K+ + +D
Sbjct: 68 EFLALMSRQLKCNDSEQELL-------EAFKVF-DKNGDGLISAAELKHVLTSIGEKLTD 119
Query: 299 AEARHLIYE 307
AE ++ E
Sbjct: 120 AEVDEMLRE 128
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 24/158 (15%)
Query: 183 RDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVET--------------MEDI 228
R K+R+D D DG+ AL R +F A +D E ++
Sbjct: 8 RLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEA 67
Query: 229 DKDKDGKVSLREYI----GDMFRGGDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEE 284
DG ++ ++I +F G+ + L VK DKN DG ++ +E
Sbjct: 68 GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKG----IVGMCDKNADGQINADE 123
Query: 285 VKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
W+ S AEA + D++ + +L+ DE+L
Sbjct: 124 FAAWLTA--LGMSKAEAAEAFNQVDTNGNGELSLDELL 159
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 18 DKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFL 77
D ID DKDG+VS E K ++Q + + + T + +I+ DE+ V FL
Sbjct: 109 DCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDFL 168
Query: 78 DEVDAAELA 86
++ LA
Sbjct: 169 FGLEETALA 177
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ +ELK +Q T + +D+E + + + +I +DE+ E + G
Sbjct: 16 DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 70
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ +ELK +Q T + +D+E + + + +I +DE+ E + G
Sbjct: 105 DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 210 PEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGG--DTDGDEELPDWVKNEKEQ 267
PEE M D ++D+D G V E++ M R D+ G K+E+E
Sbjct: 54 PEELQEMID--------EVDEDGSGTVDFDEFLVMMVRSMKDDSKG--------KSEEEL 97
Query: 268 FAMYR--DKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
++R DKN DG++D +E+K + ++ + L+ + D + D ++ DE L
Sbjct: 98 SDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2JTT|A Chain A, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
pdb|2JTT|B Chain B, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
Length = 90
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 112 DGDR-ALTREEFASFLHPEET--AHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAA 165
+GD+ L+++E + E T + ++D +V+ M+D+D++KD +V+ +EYI A
Sbjct: 23 EGDKHTLSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYITFLGA 79
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 194 DGDR-ALTREEFASFLHPEET--AHMRDLVVVETMEDIDKDKDGKVSLREYI 242
+GD+ L+++E + E T + ++D +V+ M+D+D++KD +V+ +EYI
Sbjct: 23 EGDKHTLSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYI 74
>pdb|2EEF|A Chain A, Solution Structure Of The Cbm_21 Domain From Human Protein
Phosphatase 1, Regulatory (Inhibitor) Subunit 3b
Length = 156
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 240 EYIGDMFRGGDTDG---DEELPDWVKN-EKEQFAMYRDKNGDGFMDEEEVKNW 288
+Y+ D + G D D D LP+ +++ E+ +FA+Y + NG + D KN+
Sbjct: 81 QYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQTYWDSNRGKNY 133
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 185 KRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYI 242
K + + D+DGD LT+EE SF V E + D + DG ++L E++
Sbjct: 8 KVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK-----VAEQVMKADANGDGYITLEEFL 60
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ +ELK +Q T + +D+E + + + +I +DE+ E + G
Sbjct: 105 DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 20/117 (17%)
Query: 210 PEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDG----DEELPDWVKNEK 265
PEE M D ++D+D G V E++ M R D +EEL D
Sbjct: 54 PEELQEMID--------EVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDL----- 100
Query: 266 EQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
F M+ DKN DG++D +E+K + ++ + L+ + D + D ++ DE L
Sbjct: 101 --FRMW-DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F++Y DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLY-DKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 257 LPDWVKNE-----KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSD 311
LPD + E KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 358
Query: 312 ADQKLTKDEILA 323
D + E L
Sbjct: 359 GDGTIDFPEFLT 370
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 103 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 157
K + + D DGD +T +E + + +P E A ++D++ ++D D DG +
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGDGTIDFP 366
Query: 158 EYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
E++ + A ++ Y + + + V D DG+ ++ E + +
Sbjct: 367 EFLTMMARKM--------KYTDSEEEIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLT 417
Query: 218 DLVVVETMEDIDKDKDGKVSLREYI 242
D V E + + D D DG+V+ E++
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFV 442
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 250 DTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESD 309
DTD +EEL KE F ++ DK+ +G++ E+++ ++ +D E +I E+D
Sbjct: 4 DTDAEEEL-------KEAFKVF-DKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEAD 55
Query: 310 SDADQKLTKDEIL 322
D D ++ +E +
Sbjct: 56 LDGDGQVNYEEFV 68
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 257 LPDWVKNE-----KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSD 311
LPD + E KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 358
Query: 312 ADQKLTKDEILA 323
D + E L
Sbjct: 359 GDGTIDFPEFLT 370
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 103 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 157
K + + D DGD +T +E + + +P E A ++D++ ++D D DG +
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGDGTIDFP 366
Query: 158 EYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
E++ + A ++ Y + + + V D DG+ ++ E + +
Sbjct: 367 EFLTMMARKM--------KYTDSEEEIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLT 417
Query: 218 DLVVVETMEDIDKDKDGKVSLREYI 242
D V E + + D D DG+V+ E++
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFV 442
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 28/125 (22%)
Query: 143 MEDIDKDKDGKVSLREYIE--VDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRAL- 199
M +D D G + E+I +D L E R +R + + D DG +
Sbjct: 387 MPLLDMDGSGSIEYSEFIASAIDRTILLSRE-----------RMERAFKMFDKDGSGKIS 435
Query: 200 TREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPD 259
T+E F F + + M +L + +E +D +KDG+V E++ E L +
Sbjct: 436 TKELFKLFSQADSSIQMEELESI--IEQVDNNKDGEVDFNEFV------------EMLQN 481
Query: 260 WVKNE 264
+V+NE
Sbjct: 482 FVRNE 486
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 98 MLNRDK--RRWDVADIDGDRAL-TREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKV 154
+L+R++ R + + D DG + T+E F F + + M +L + +E +D +KDG+V
Sbjct: 413 LLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESI--IEQVDNNKDGEV 470
Query: 155 SLREYIEV 162
E++E+
Sbjct: 471 DFNEFVEM 478
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 210 PEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGG--DTDG--DEELPDWVKNEK 265
PEE M D ++D+D G V E++ M R D+ G +EEL D
Sbjct: 54 PEELQEMID--------EVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDL----- 100
Query: 266 EQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
F M+ DKN DG++D +E+K + ++ + L+ + D + D ++ DE L
Sbjct: 101 --FRMF-DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXL 154
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ +ELK +Q T + +D+E + + + +I +DE E + G
Sbjct: 105 DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFMKG 159
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 21 DKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75
DK+ DG++ +ELK +Q T + +D+E + + + +I +DE+ E + G
Sbjct: 105 DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFMKG 159
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 20/117 (17%)
Query: 210 PEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDG----DEELPDWVKNEK 265
PEE M D ++D+D G V E++ M R D +EEL D
Sbjct: 54 PEELQEMID--------EVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDL----- 100
Query: 266 EQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
F M+ DKN DG++D +E+K + ++ + L+ + D + D ++ DE L
Sbjct: 101 --FRMF-DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWL 154
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 112 DGDR-ALTREEFASFLHPEET--AHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAA 165
+GD+ L+++E + E T + ++D + MED+D++KD +V+ +EY+ A
Sbjct: 23 EGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 79
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 194 DGDR-ALTREEFASFLHPEET--AHMRDLVVVETMEDIDKDKDGKVSLREYI 242
+GD+ L+++E + E T + ++D + MED+D++KD +V+ +EY+
Sbjct: 23 EGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74
>pdb|1A4P|A Chain A, P11 (s100a10), Ligand Of Annexin Ii
pdb|1A4P|B Chain B, P11 (s100a10), Ligand Of Annexin Ii
pdb|1BT6|A Chain A, P11 (S100a10), Ligand Of Annexin Ii In Complex With
Annexin Ii N-Terminus
pdb|1BT6|B Chain B, P11 (S100a10), Ligand Of Annexin Ii In Complex With
Annexin Ii N-Terminus
pdb|4FTG|A Chain A, The Crystal Structure Of An Ahnak Peptide In Complex With
The S100a10/anxa2 Heterotetramer
pdb|4FTG|B Chain B, The Crystal Structure Of An Ahnak Peptide In Complex With
The S100a10/anxa2 Heterotetramer
Length = 96
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 115 RALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAA 165
R L +EF FL ++ L V + M+D+D+ +DGKV + + + A
Sbjct: 31 RVLMEKEFPGFLENQKDP----LAVDKIMKDLDQCRDGKVGFQSFFSLIAG 77
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 197 RALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYI 242
R L +EF FL ++ L V + M+D+D+ +DGKV + +
Sbjct: 31 RVLMEKEFPGFLENQKDP----LAVDKIMKDLDQCRDGKVGFQSFF 72
>pdb|1UUR|A Chain A, Structure Of An Activated Dictyostelium Stat In Its
Dna-Unbound Form
pdb|1UUS|A Chain A, Structure Of An Activated Dictyostelium Stat In Its
Dna-Unbound Form
Length = 473
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVES 51
+ +D K G+I++ D K F K++L+ IQF Q +HN+++S
Sbjct: 72 MSALDATKKGMILEPTDLAKL-FALKQDLQ--IQFKQLSLLHNEIQS 115
>pdb|4DRW|A Chain A, Crystal Structure Of The Ternary Complex Between S100a10,
An Annexin A2 N-Terminal Peptide And An Ahnak Peptide
pdb|4DRW|B Chain B, Crystal Structure Of The Ternary Complex Between S100a10,
An Annexin A2 N-Terminal Peptide And An Ahnak Peptide
pdb|4DRW|C Chain C, Crystal Structure Of The Ternary Complex Between S100a10,
An Annexin A2 N-Terminal Peptide And An Ahnak Peptide
pdb|4DRW|D Chain D, Crystal Structure Of The Ternary Complex Between S100a10,
An Annexin A2 N-Terminal Peptide And An Ahnak Peptide
Length = 121
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 115 RALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAA 165
R L +EF FL ++ L V + M+D+D+ +DGKV + + + A
Sbjct: 37 RVLMEKEFPGFLENQKDP----LAVDKIMKDLDQCRDGKVGFQSFFSLIAG 83
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 197 RALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYI 242
R L +EF FL ++ L V + M+D+D+ +DGKV + +
Sbjct: 37 RVLMEKEFPGFLENQKDP----LAVDKIMKDLDQCRDGKVGFQSFF 78
>pdb|2FNA|A Chain A, Crystal Structure Of An Archaeal Aaa+ Atpase (Sso1545)
From Sulfolobus Solfataricus P2 At 2.00 A Resolution
pdb|2FNA|B Chain B, Crystal Structure Of An Archaeal Aaa+ Atpase (Sso1545)
From Sulfolobus Solfataricus P2 At 2.00 A Resolution
Length = 357
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 16/120 (13%)
Query: 93 FSYKNMLNRDKRRWDVA---DIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKD 149
+Y + D + D A ++ + L +EF +FLH E A R L + T+ K
Sbjct: 246 LTYFGFIYLDNKNLDFAINQTLEYAKKLILKEFENFLHGREIARKRYLNIXRTLSKCGKW 305
Query: 150 KDGK--VSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASF 207
D K + L E IE+ +E+ Y + K W + +G++ E S
Sbjct: 306 SDVKRALELEEGIEISDSEI---------YNYLTQLTKHSWIIK--EGEKYCPSEPLISL 354
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE FA++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L+
Sbjct: 13 KEAFALF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE FA++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L+
Sbjct: 13 KEAFALF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 3/114 (2%)
Query: 229 DKDKDGKVSLREYIGDMFRG-GDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKN 287
D +KD VS EY+ + +LP W +N D +GDG +D EE +N
Sbjct: 70 DINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQN 129
Query: 288 WILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFVGSQATDFGEALV 341
+ +D A + + L + + L Y + S A D G L+
Sbjct: 130 YCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKEL--YYRLLTSPAADAGNTLM 181
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D D + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 103 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 157
K + + D DGD +T +E + + +P E A ++D++ ++D D DG +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGDGTIDFP 66
Query: 158 EYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
E++ + A ++ KD D S + + + + V D DG+ ++ E + +
Sbjct: 67 EFLTMMARKM-KDTD---SEEEI----REAFRVFDKDGNGYISAAELRHVM-TNLGEKLT 117
Query: 218 DLVVVETMEDIDKDKDGKVSLREYI 242
D V E + + D D DG+V+ E++
Sbjct: 118 DEEVDEMIREADIDGDGQVNYEEFV 142
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D D + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D D + E L
Sbjct: 313 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 103 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 157
K + + D DGD +T +E + + +P E A ++D++ ++D D DG +
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGDGTIDFP 366
Query: 158 EYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
E++ + A ++ KD D + + V D DG+ ++ E + +
Sbjct: 367 EFLTMMARKM-KDTDS-------EEEIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLT 417
Query: 218 DLVVVETMEDIDKDKDGKVSLREYI 242
D V E + + D D DG+V+ E++
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFV 442
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D D + E L
Sbjct: 314 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 371
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 103 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 157
K + + D DGD +T +E + + +P E A ++D++ ++D D DG +
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGDGTIDFP 367
Query: 158 EYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
E++ + A ++ Y + + + V D DG+ ++ E + +
Sbjct: 368 EFLTMMARKM--------KYTDSEEEIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLT 418
Query: 218 DLVVVETMEDIDKDKDGKVSLREYI 242
D V E + + D D DG+V+ E++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFV 443
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D D + E L
Sbjct: 305 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 361
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWI---LPPDFDHSDAEARHLIYESDSDADQKLTKDEI 321
KE F + DK+ GF++EEE+K + D +D E + L+ DSD D K+ DE
Sbjct: 44 KEVFEIL-DKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEF 102
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 103 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 157
K + + D DGD +T +E + + +P E A ++D++ ++D D +G +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGNGTIDFP 66
Query: 158 EYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
E++ + A ++ KD D + K + V D DG+ ++ E + +
Sbjct: 67 EFLNLMARKM-KDTDSE-------EKLKEAFRVFDKDGNGFISAAELRHVM-TNLGEKLT 117
Query: 218 DLVVVETMEDIDKDKDGKVSLREYI 242
D V E + + D D DG+V+ E++
Sbjct: 118 DEEVDEMIREADVDGDGQVNYEEFV 142
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 31/124 (25%)
Query: 229 DKDKDGKVSLREY---------------IGDMFRGGDTDGDEEL--PDWV---------- 261
DKD DG ++ +E + DM D DG+ + P+++
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT 79
Query: 262 ---KNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTK 318
+ KE F ++ DK+G+GF+ E+++ + +D E +I E+D D D ++
Sbjct: 80 DSEEKLKEAFRVF-DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Query: 319 DEIL 322
+E +
Sbjct: 139 EEFV 142
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 254 DEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDAD 313
DE++ ++ KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D +
Sbjct: 6 DEQIAEF----KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 314 QKLTKDEIL 322
+ E L
Sbjct: 61 GTIDFPEFL 69
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 190 VADIDGDRALTREEFASFL------HPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIG 243
+AD DGD+ +TREEF + P+ A M + + D D DG V+ +
Sbjct: 63 IADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVT----VA 118
Query: 244 DMFRGGDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEV 285
D R G E + Q A D +GDG + E E+
Sbjct: 119 DTARALTAFGVPE------DLARQAAAALDTDGDGKVGETEI 154
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 103 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 157
K + + D DGD +T +E + + +P E A ++D++ ++D D +G +
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGNGTIDFP 63
Query: 158 EYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
E++ + A ++ KD D S + + K + V D DG+ ++ E + +
Sbjct: 64 EFLNLMARKM-KDTD---SEEEL----KEAFRVFDKDGNGFISAAELRHVM-TNLGEKLT 114
Query: 218 DLVVVETMEDIDKDKDGKVSLREYI 242
D V E + + D D DG+V+ E++
Sbjct: 115 DEEVDEMIREADVDGDGQVNYEEFV 139
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 254 DEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDAD 313
DE++ ++ KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D +
Sbjct: 3 DEQIAEF----KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 57
Query: 314 QKLTKDEIL 322
+ E L
Sbjct: 58 GTIDFPEFL 66
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 31/124 (25%)
Query: 229 DKDKDGKVSLREY---------------IGDMFRGGDTDGDEEL--PDWV---------- 261
DKD DG ++ +E + DM D DG+ + P+++
Sbjct: 17 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT 76
Query: 262 ---KNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTK 318
+ KE F ++ DK+G+GF+ E+++ + +D E +I E+D D D ++
Sbjct: 77 DSEEELKEAFRVF-DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 135
Query: 319 DEIL 322
+E +
Sbjct: 136 EEFV 139
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 103 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 157
K + + D DGD +T +E + + +P E A ++D++ ++D D +G +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGNGTIDFP 66
Query: 158 EYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
E++ + A ++ KD D S + + K + V D DG+ ++ E + +
Sbjct: 67 EFLNLMARKM-KDTD---SEEEL----KEAFRVFDKDGNGFISAAELRHVM-TNLGEKLT 117
Query: 218 DLVVVETMEDIDKDKDGKVSLREYI 242
D V E + + D D DG+V+ E++
Sbjct: 118 DEEVDEMIREADVDGDGQVNYEEFV 142
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 254 DEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDAD 313
DE++ ++ KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D +
Sbjct: 6 DEQIAEF----KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 314 QKLTKDEIL 322
+ E L
Sbjct: 61 GTIDFPEFL 69
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 31/124 (25%)
Query: 229 DKDKDGKVSLREY---------------IGDMFRGGDTDGDEEL--PDWV---------- 261
DKD DG ++ +E + DM D DG+ + P+++
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT 79
Query: 262 ---KNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTK 318
+ KE F ++ DK+G+GF+ E+++ + +D E +I E+D D D ++
Sbjct: 80 DSEEELKEAFRVF-DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Query: 319 DEIL 322
+E +
Sbjct: 139 EEFV 142
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 29/124 (23%)
Query: 229 DKDKDGKVSLREY---------------IGDMFRGGDTDGDEEL--PDWVK--------- 262
DKD DG ++ +E + DM D DG+ + P+++
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 80
Query: 263 -NEKEQFAMYR--DKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKD 319
+E+E +R DK+G+GF+ E+++ + +D E +I ESD D D ++ +
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYE 140
Query: 320 EILA 323
E +
Sbjct: 141 EFVT 144
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 14 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDH---SDAEARHLIYESDSDADQKLTKDEI 321
K+ FA+ D++ GF++E+E+K ++ D +D E + + DSD D K+ DE
Sbjct: 45 KKAFAII-DQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEF 103
Query: 322 LA 323
A
Sbjct: 104 TA 105
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 28.5 bits (62), Expect = 6.0, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 106 WDVADIDGDRALTREEFASFLH 127
W+++DID D LT EEF +H
Sbjct: 54 WNLSDIDQDGKLTAEEFILAMH 75
Score = 28.5 bits (62), Expect = 6.0, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 188 WDVADIDGDRALTREEFASFLH 209
W+++DID D LT EEF +H
Sbjct: 54 WNLSDIDQDGKLTAEEFILAMH 75
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 14 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEIL 322
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 27/122 (22%)
Query: 229 DKDKDGKVSLREY---------------IGDMFRGGDTDGDEEL--PDWVK--------N 263
DKD DG ++ +E + DM D DG+ + P+++ +
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDS 79
Query: 264 EKEQFAMYR--DKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEI 321
E+E +R DK+G+GF+ E+++ + +D E +I E+D D D ++ +E
Sbjct: 80 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
Query: 322 LA 323
+
Sbjct: 140 VT 141
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 22/148 (14%)
Query: 103 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 157
K + + D DGD +T +E + + +P E A ++D++ ++D D +G +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGNGTIDFP 66
Query: 158 EYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
E++ + A ++ E++ + + V D DG+ ++ E + +
Sbjct: 67 EFLTMMARKMKDSEEE----------IREAFRVFDKDGNGFISAAELRHVM-TNLGEKLT 115
Query: 218 DLVVVETMEDIDKDKDGKVSLREYIGDM 245
D V E + + D D DG+V+ E++ M
Sbjct: 116 DEEVDEMIREADIDGDGQVNYEEFVTMM 143
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 14 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 9 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 315 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 372
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 314 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 12 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 314 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 14 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 10 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 103 KRRWDVADIDGDRALTREEFASFL-----HPEETAHMRDLVVVETMEDIDKDKDGKVSLR 157
K + + D DGD +T +E + + +P E A ++D++ ++D D +G +
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-AELQDMI-----NEVDADGNGTIDFP 367
Query: 158 EYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR 217
E++ + A ++ Y + + + V D DG+ ++ E + +
Sbjct: 368 EFLTMMARKM--------KYTDSEEEIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLT 418
Query: 218 DLVVVETMEDIDKDKDGKVSLREYI 242
D V E + + D D DG+V+ E++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFV 443
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 314 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 11 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 14 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 9 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 314 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 142 TMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTR 201
E DK+KDGK+SL E+ EV A F+ ++++ + ++ D+DG+ L
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALA-----FSPYFTQEDIV----KFFEEIDVDGNGELNA 56
Query: 202 EEFASFL 208
+EF S +
Sbjct: 57 DEFTSCI 63
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 14 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 11 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 14 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 277 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 14 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 19 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 76
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 14 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 280 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 280 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 15 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 72
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 11 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 103 KRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEV 162
K ++ D D +T EE + L A++++ +++ + D D G + +E+I
Sbjct: 30 KEXFNXIDADKSGQITFEELKAGL-KRVGANLKESEILDLXQAADVDNSGTIDYKEFI-- 86
Query: 163 DAAELAKDEDQGFSYKNMLNRDKRRWDVA---DIDGDRALTREEFASFLHPEETAHMRDL 219
AA L + N + R+ + D DG +T +E E + D+
Sbjct: 87 -AATL---------HLNKIEREDHLFAAFTYFDKDGSGYITPDELQ---QACEEFGVEDV 133
Query: 220 VVVETMEDIDKDKDGKVSLREYIGDMFRGGDT 251
+ E D+D+D DG++ E++ +G T
Sbjct: 134 RIEELXRDVDQDNDGRIDYNEFVAXXQKGSIT 165
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 17 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 74
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 14 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 115 RALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAA 165
+ L + E + FL ++ A D V M+++D+D DG+V +EY+ + AA
Sbjct: 34 KELLQTELSGFLDAQKDADAVDKV----MKELDEDGDGEVDFQEYVVLVAA 80
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323
KE F+++ DK+GDG + +E+ + + ++AE + +I E D+D + + E L
Sbjct: 13 KEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,908,768
Number of Sequences: 62578
Number of extensions: 568881
Number of successful extensions: 2189
Number of sequences better than 100.0: 202
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 1518
Number of HSP's gapped (non-prelim): 753
length of query: 346
length of database: 14,973,337
effective HSP length: 100
effective length of query: 246
effective length of database: 8,715,537
effective search space: 2144022102
effective search space used: 2144022102
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.6 bits)