Query psy3180
Match_columns 346
No_of_seqs 193 out of 2880
Neff 10.0
Searched_HMMs 46136
Date Fri Aug 16 18:23:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3180.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3180hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4223|consensus 100.0 1.9E-33 4.1E-38 236.3 16.9 255 4-346 70-325 (325)
2 COG5126 FRQ1 Ca2+-binding prot 99.9 1.3E-21 2.7E-26 152.0 13.3 138 179-325 17-154 (160)
3 COG5126 FRQ1 Ca2+-binding prot 99.9 8.7E-22 1.9E-26 152.9 11.8 142 5-164 14-155 (160)
4 KOG0027|consensus 99.9 2.1E-21 4.5E-26 154.4 13.7 142 181-326 7-148 (151)
5 KOG0027|consensus 99.9 2.2E-21 4.7E-26 154.3 11.8 147 6-165 3-149 (151)
6 PTZ00183 centrin; Provisional 99.8 1.1E-18 2.4E-23 140.4 12.2 144 5-165 11-154 (158)
7 PTZ00184 calmodulin; Provision 99.8 2.2E-18 4.8E-23 137.2 12.0 143 5-164 5-147 (149)
8 KOG0028|consensus 99.8 2E-18 4.2E-23 130.8 10.7 144 5-165 27-170 (172)
9 KOG4251|consensus 99.8 7E-18 1.5E-22 136.4 13.4 262 6-346 96-362 (362)
10 KOG0037|consensus 99.8 6.5E-18 1.4E-22 135.2 12.6 154 9-201 55-209 (221)
11 KOG2643|consensus 99.8 4.3E-18 9.3E-23 148.6 11.0 231 56-331 208-457 (489)
12 PTZ00184 calmodulin; Provision 99.8 2.1E-17 4.6E-22 131.5 13.2 138 180-325 9-146 (149)
13 KOG0036|consensus 99.7 1.1E-17 2.3E-22 145.3 11.6 154 180-346 12-177 (463)
14 PTZ00183 centrin; Provisional 99.7 3.3E-17 7.2E-22 131.8 13.7 139 180-326 15-153 (158)
15 KOG0037|consensus 99.7 4.4E-17 9.6E-22 130.4 13.0 134 181-328 56-189 (221)
16 KOG4223|consensus 99.7 8.4E-17 1.8E-21 136.2 14.9 192 10-245 112-303 (325)
17 KOG0028|consensus 99.7 1.3E-16 2.9E-21 120.9 11.7 139 179-325 30-168 (172)
18 KOG2643|consensus 99.7 4.1E-16 9E-21 136.4 13.6 209 8-251 230-457 (489)
19 KOG0031|consensus 99.7 1.7E-15 3.7E-20 114.0 11.3 138 6-164 27-164 (171)
20 KOG0031|consensus 99.6 3.8E-15 8.2E-20 112.2 12.7 135 179-325 29-163 (171)
21 KOG0030|consensus 99.6 1.2E-15 2.6E-20 112.9 9.0 136 182-324 11-148 (152)
22 KOG0030|consensus 99.6 6.5E-15 1.4E-19 109.0 9.5 140 99-247 10-151 (152)
23 KOG0034|consensus 99.6 4.6E-14 1E-18 113.9 11.5 137 99-248 32-176 (187)
24 KOG0044|consensus 99.5 7.4E-14 1.6E-18 112.7 10.9 139 100-247 26-175 (193)
25 KOG0034|consensus 99.5 1.1E-13 2.5E-18 111.7 11.5 142 5-166 27-176 (187)
26 KOG0036|consensus 99.5 1E-13 2.2E-18 120.8 11.0 138 6-166 9-147 (463)
27 KOG0044|consensus 99.5 4.2E-13 9E-18 108.4 10.1 133 185-325 29-173 (193)
28 KOG0751|consensus 99.4 3.3E-12 7.1E-17 113.6 15.5 275 5-325 27-312 (694)
29 KOG2562|consensus 99.4 7.5E-13 1.6E-17 117.2 11.2 265 14-323 142-420 (493)
30 PF13499 EF-hand_7: EF-hand do 99.3 3E-12 6.4E-17 86.6 5.1 62 12-73 1-66 (66)
31 cd05022 S-100A13 S-100A13: S-1 99.3 1.2E-11 2.7E-16 87.7 6.1 70 7-76 4-76 (89)
32 cd05022 S-100A13 S-100A13: S-1 99.2 1.3E-11 2.8E-16 87.6 5.6 67 260-327 6-75 (89)
33 PF13499 EF-hand_7: EF-hand do 99.2 6.8E-12 1.5E-16 84.9 3.9 62 263-325 1-66 (66)
34 KOG0751|consensus 99.2 9.8E-11 2.1E-15 104.3 10.9 215 105-342 41-267 (694)
35 cd05027 S-100B S-100B: S-100B 99.2 4.9E-11 1.1E-15 84.8 5.1 72 261-337 7-85 (88)
36 cd05027 S-100B S-100B: S-100B 99.1 1.2E-10 2.6E-15 82.8 5.9 69 8-76 5-80 (88)
37 KOG0377|consensus 99.1 4.7E-10 1E-14 98.8 9.9 144 181-329 463-617 (631)
38 KOG0377|consensus 99.1 1E-09 2.2E-14 96.7 10.5 154 95-250 459-618 (631)
39 KOG4251|consensus 99.0 2.8E-09 6E-14 87.0 11.2 201 9-243 138-341 (362)
40 cd05026 S-100Z S-100Z: S-100Z 99.0 7.5E-10 1.6E-14 79.9 6.0 69 8-76 7-82 (93)
41 PLN02964 phosphatidylserine de 99.0 1.2E-09 2.7E-14 103.9 8.6 102 6-128 138-243 (644)
42 cd05029 S-100A6 S-100A6: S-100 99.0 1.4E-09 3.1E-14 77.3 6.7 65 261-326 9-78 (88)
43 cd05026 S-100Z S-100Z: S-100Z 99.0 1.6E-09 3.4E-14 78.3 6.5 68 260-328 8-82 (93)
44 PLN02964 phosphatidylserine de 99.0 4.5E-09 9.8E-14 100.1 11.1 113 181-305 142-271 (644)
45 cd05029 S-100A6 S-100A6: S-100 99.0 1.3E-09 2.9E-14 77.5 5.5 68 8-75 7-79 (88)
46 cd05031 S-100A10_like S-100A10 98.9 1.6E-09 3.4E-14 78.7 5.9 67 9-75 6-79 (94)
47 smart00027 EH Eps15 homology d 98.9 1.7E-09 3.8E-14 78.8 5.8 69 5-75 4-72 (96)
48 PF13833 EF-hand_8: EF-hand do 98.9 6.8E-10 1.5E-14 71.7 3.2 51 276-326 1-52 (54)
49 cd00052 EH Eps15 homology doma 98.9 2.2E-09 4.8E-14 72.7 5.7 61 265-328 2-62 (67)
50 cd05031 S-100A10_like S-100A10 98.9 2.2E-09 4.8E-14 77.9 5.7 65 261-326 7-78 (94)
51 cd00213 S-100 S-100: S-100 dom 98.9 2.3E-09 5.1E-14 76.8 5.8 69 7-75 4-79 (88)
52 cd05025 S-100A1 S-100A1: S-100 98.9 2.4E-09 5.1E-14 77.4 5.8 66 261-327 8-80 (92)
53 cd00052 EH Eps15 homology doma 98.9 2.6E-09 5.6E-14 72.3 5.7 60 14-75 2-61 (67)
54 cd05025 S-100A1 S-100A1: S-100 98.9 2.6E-09 5.7E-14 77.1 5.9 67 9-75 7-80 (92)
55 cd05023 S-100A11 S-100A11: S-1 98.9 4.6E-09 1E-13 74.8 6.4 67 260-326 7-79 (89)
56 cd05023 S-100A11 S-100A11: S-1 98.9 4.1E-09 8.8E-14 75.1 6.0 69 7-75 5-80 (89)
57 cd00252 SPARC_EC SPARC_EC; ext 98.9 4E-09 8.6E-14 78.7 5.8 64 6-73 43-106 (116)
58 cd00213 S-100 S-100: S-100 dom 98.9 5.2E-09 1.1E-13 75.0 6.3 68 260-328 6-80 (88)
59 KOG0038|consensus 98.9 7.7E-09 1.7E-13 77.5 6.9 102 140-249 74-179 (189)
60 KOG0038|consensus 98.9 2.8E-09 6.1E-14 79.8 4.6 95 222-323 74-173 (189)
61 PF13833 EF-hand_8: EF-hand do 98.8 4.6E-09 9.9E-14 67.7 4.3 51 24-74 1-52 (54)
62 KOG2562|consensus 98.8 8.7E-08 1.9E-12 85.6 13.6 218 10-243 173-420 (493)
63 smart00027 EH Eps15 homology d 98.8 1.1E-08 2.3E-13 74.6 6.5 65 261-328 9-73 (96)
64 cd00252 SPARC_EC SPARC_EC; ext 98.8 2E-08 4.3E-13 75.0 7.4 63 258-325 44-106 (116)
65 cd00051 EFh EF-hand, calcium b 98.8 1.3E-08 2.7E-13 67.4 5.8 61 13-73 2-62 (63)
66 cd00051 EFh EF-hand, calcium b 98.8 1.8E-08 4E-13 66.6 5.5 61 264-325 2-62 (63)
67 cd05030 calgranulins Calgranul 98.6 2.6E-07 5.7E-12 65.9 7.1 72 96-167 4-81 (88)
68 cd05030 calgranulins Calgranul 98.6 1.5E-07 3.3E-12 67.1 5.7 69 7-75 4-79 (88)
69 KOG0041|consensus 98.5 1.2E-07 2.6E-12 75.2 4.9 70 6-75 94-163 (244)
70 KOG0040|consensus 98.5 7.5E-07 1.6E-11 89.2 10.6 138 97-246 2250-2397(2399)
71 KOG0041|consensus 98.5 1.7E-07 3.7E-12 74.4 4.8 67 261-328 98-164 (244)
72 PF00036 EF-hand_1: EF hand; 98.4 1.8E-07 3.8E-12 51.3 2.5 28 13-40 2-29 (29)
73 PF14658 EF-hand_9: EF-hand do 98.4 4.8E-07 1E-11 59.3 4.1 63 266-329 2-66 (66)
74 PF14658 EF-hand_9: EF-hand do 98.4 7.6E-07 1.6E-11 58.3 4.9 61 15-75 2-64 (66)
75 KOG0040|consensus 98.4 3.2E-06 7E-11 84.9 11.3 140 4-163 2246-2396(2399)
76 cd05024 S-100A10 S-100A10: A s 98.2 8.6E-06 1.9E-10 57.4 7.4 71 97-168 5-79 (91)
77 PF13405 EF-hand_6: EF-hand do 98.2 1.5E-06 3.2E-11 48.7 2.6 30 12-41 1-31 (31)
78 cd05024 S-100A10 S-100A10: A s 98.1 7.7E-06 1.7E-10 57.7 6.2 67 9-76 6-77 (91)
79 PF14788 EF-hand_10: EF hand; 98.1 3.2E-06 7E-11 52.0 3.0 49 280-328 2-50 (51)
80 PF13202 EF-hand_5: EF hand; P 98.0 3.3E-06 7.2E-11 44.5 2.2 25 13-37 1-25 (25)
81 PF00036 EF-hand_1: EF hand; 98.0 7.2E-06 1.6E-10 44.9 3.2 26 139-164 2-27 (29)
82 PF12763 EF-hand_4: Cytoskelet 98.0 1.2E-05 2.7E-10 58.7 4.5 68 5-75 4-71 (104)
83 PF12763 EF-hand_4: Cytoskelet 97.8 2.7E-05 5.9E-10 56.9 4.2 65 261-329 9-73 (104)
84 PF13405 EF-hand_6: EF-hand do 97.8 7.2E-06 1.6E-10 45.9 0.9 29 264-293 2-31 (31)
85 PRK12309 transaldolase/EF-hand 97.8 3.3E-05 7.2E-10 70.3 5.5 54 9-75 332-385 (391)
86 PRK12309 transaldolase/EF-hand 97.8 0.00013 2.7E-09 66.5 8.8 52 262-327 334-385 (391)
87 KOG0998|consensus 97.8 4.7E-05 1E-09 76.2 6.3 300 9-331 9-349 (847)
88 KOG4666|consensus 97.7 5.6E-05 1.2E-09 64.8 5.0 134 102-250 229-362 (412)
89 PF10591 SPARC_Ca_bdg: Secrete 97.7 1.4E-05 3E-10 59.7 1.1 63 7-71 50-112 (113)
90 KOG1029|consensus 97.7 0.0002 4.3E-09 68.2 8.6 131 111-247 26-257 (1118)
91 PF13202 EF-hand_5: EF hand; P 97.6 3.2E-05 6.8E-10 40.7 1.7 23 265-288 2-24 (25)
92 KOG1029|consensus 97.6 0.00018 3.9E-09 68.4 7.2 134 187-327 21-257 (1118)
93 KOG1707|consensus 97.6 0.00024 5.2E-09 66.2 7.4 145 98-245 193-375 (625)
94 PF10591 SPARC_Ca_bdg: Secrete 97.5 6.3E-05 1.4E-09 56.1 2.9 59 262-323 54-112 (113)
95 KOG4666|consensus 97.5 0.00027 5.9E-09 60.7 6.5 121 194-327 239-359 (412)
96 KOG0169|consensus 97.3 0.0016 3.4E-08 62.7 9.3 144 5-169 130-278 (746)
97 PF14788 EF-hand_10: EF hand; 97.3 0.00047 1E-08 42.6 3.8 47 28-74 2-48 (51)
98 KOG4065|consensus 97.3 0.00059 1.3E-08 49.4 4.9 63 10-72 65-142 (144)
99 KOG0046|consensus 97.2 0.00062 1.3E-08 62.3 5.2 73 5-78 13-88 (627)
100 KOG1955|consensus 97.1 0.00084 1.8E-08 61.0 5.7 68 261-331 230-297 (737)
101 KOG0046|consensus 97.0 0.0012 2.5E-08 60.6 5.6 68 261-330 18-88 (627)
102 smart00054 EFh EF-hand, calciu 96.8 0.0013 2.9E-08 35.1 2.8 27 13-39 2-28 (29)
103 KOG0169|consensus 96.4 0.027 5.8E-07 54.5 10.3 140 97-250 133-277 (746)
104 KOG4065|consensus 96.3 0.0075 1.6E-07 43.8 4.5 60 103-162 70-142 (144)
105 KOG1707|consensus 96.0 0.036 7.8E-07 52.2 8.6 147 175-328 188-378 (625)
106 PF09279 EF-hand_like: Phospho 95.8 0.01 2.2E-07 41.7 3.2 66 101-167 1-71 (83)
107 smart00054 EFh EF-hand, calciu 95.6 0.011 2.3E-07 31.3 2.2 26 264-290 2-27 (29)
108 PF09279 EF-hand_like: Phospho 95.3 0.027 5.9E-07 39.4 3.9 66 184-250 2-72 (83)
109 PF05042 Caleosin: Caleosin re 95.2 0.1 2.2E-06 41.5 7.2 107 11-128 7-166 (174)
110 KOG1955|consensus 94.7 0.044 9.6E-07 50.2 4.3 69 5-75 225-293 (737)
111 KOG0998|consensus 94.5 0.045 9.8E-07 55.3 4.5 218 102-327 13-311 (847)
112 KOG3555|consensus 94.0 0.053 1.1E-06 47.5 3.2 67 5-75 244-310 (434)
113 PF08976 DUF1880: Domain of un 94.0 0.046 9.9E-07 40.1 2.4 34 295-328 3-36 (118)
114 PF05042 Caleosin: Caleosin re 93.9 0.52 1.1E-05 37.5 8.3 71 216-291 93-166 (174)
115 PF08726 EFhand_Ca_insen: Ca2+ 92.3 0.11 2.4E-06 34.7 2.2 58 8-73 3-67 (69)
116 KOG4347|consensus 92.3 0.3 6.5E-06 46.7 5.7 78 117-204 535-612 (671)
117 KOG2243|consensus 92.1 0.21 4.6E-06 51.4 4.7 68 267-340 4062-4129(5019)
118 KOG4578|consensus 92.0 0.11 2.4E-06 45.2 2.3 66 10-75 332-398 (421)
119 KOG0042|consensus 91.4 0.15 3.4E-06 47.8 2.8 74 5-78 587-660 (680)
120 KOG3555|consensus 91.4 1.4 3.1E-05 38.9 8.3 105 177-293 206-312 (434)
121 KOG3866|consensus 90.8 0.29 6.3E-06 42.3 3.7 60 15-74 248-323 (442)
122 KOG0035|consensus 90.2 2.4 5.1E-05 42.7 9.7 102 96-206 743-848 (890)
123 PF08976 DUF1880: Domain of un 90.1 0.2 4.4E-06 36.8 1.8 31 44-74 4-34 (118)
124 KOG2243|consensus 89.5 0.66 1.4E-05 48.0 5.4 63 186-250 4061-4123(5019)
125 KOG4578|consensus 89.3 0.18 3.8E-06 44.0 1.2 65 102-166 335-399 (421)
126 KOG0035|consensus 88.7 1.1 2.4E-05 44.9 6.3 102 6-124 742-848 (890)
127 PF08726 EFhand_Ca_insen: Ca2+ 88.5 0.59 1.3E-05 31.3 3.0 58 183-245 7-67 (69)
128 PLN02952 phosphoinositide phos 88.1 2.3 5E-05 41.3 7.9 90 150-247 13-110 (599)
129 PF09069 EF-hand_3: EF-hand; 86.3 2.6 5.5E-05 29.9 5.4 63 10-75 2-75 (90)
130 PF05517 p25-alpha: p25-alpha 84.9 1.5 3.3E-05 34.6 4.2 67 263-330 3-72 (154)
131 KOG3866|consensus 82.1 6.6 0.00014 34.3 7.0 95 29-129 225-325 (442)
132 KOG0042|consensus 81.5 1.6 3.4E-05 41.4 3.4 77 259-336 590-666 (680)
133 KOG1265|consensus 77.1 47 0.001 33.8 11.8 127 108-250 156-302 (1189)
134 PF09069 EF-hand_3: EF-hand; 77.0 15 0.00032 26.0 6.4 64 182-248 3-76 (90)
135 PLN02952 phosphoinositide phos 75.0 12 0.00026 36.5 7.4 56 113-169 13-69 (599)
136 PF05517 p25-alpha: p25-alpha 74.8 8.2 0.00018 30.5 5.3 65 105-169 7-73 (154)
137 KOG1265|consensus 73.4 21 0.00046 36.1 8.5 67 100-166 221-300 (1189)
138 PF00404 Dockerin_1: Dockerin 72.8 6.7 0.00015 19.4 2.7 16 21-36 1-16 (21)
139 PF14513 DAG_kinase_N: Diacylg 71.7 25 0.00054 27.2 7.0 59 25-85 5-70 (138)
140 KOG4347|consensus 70.8 4.2 9.1E-05 39.2 3.2 60 9-69 553-612 (671)
141 KOG4004|consensus 65.4 4.5 9.7E-05 32.9 1.9 58 187-247 192-250 (259)
142 PF08414 NADPH_Ox: Respiratory 64.6 20 0.00042 25.8 4.7 65 99-169 29-96 (100)
143 KOG2871|consensus 59.5 10 0.00022 34.1 3.2 71 5-75 303-374 (449)
144 cd07313 terB_like_2 tellurium 59.1 24 0.00053 25.4 4.8 53 25-77 13-67 (104)
145 PF12174 RST: RCD1-SRO-TAF4 (R 59.0 4.5 9.9E-05 27.1 0.8 38 293-330 19-56 (70)
146 KOG1954|consensus 54.8 11 0.00024 34.2 2.6 48 113-163 456-503 (532)
147 cd07313 terB_like_2 tellurium 52.8 49 0.0011 23.8 5.6 84 113-206 12-96 (104)
148 KOG4004|consensus 51.1 8.6 0.00019 31.3 1.3 55 55-128 195-250 (259)
149 PF05099 TerB: Tellurite resis 49.9 35 0.00075 26.1 4.6 75 24-114 36-112 (140)
150 PF11116 DUF2624: Protein of u 49.0 17 0.00037 25.4 2.3 34 278-311 13-46 (85)
151 PF09068 EF-hand_2: EF hand; 48.8 47 0.001 25.3 5.0 67 100-166 41-126 (127)
152 KOG1954|consensus 47.6 24 0.00052 32.1 3.6 61 264-328 446-506 (532)
153 cd07316 terB_like_DjlA N-termi 47.0 47 0.001 23.9 4.7 85 195-286 12-96 (106)
154 KOG3449|consensus 44.5 83 0.0018 23.1 5.3 59 264-328 3-61 (112)
155 PF03979 Sigma70_r1_1: Sigma-7 42.5 31 0.00067 23.9 2.9 44 263-311 8-51 (82)
156 PRK09430 djlA Dna-J like membr 42.1 61 0.0013 28.3 5.3 103 195-307 68-174 (267)
157 PF11116 DUF2624: Protein of u 41.5 1.2E+02 0.0026 21.2 6.2 49 26-74 13-61 (85)
158 KOG2871|consensus 39.5 11 0.00023 34.0 0.2 71 99-169 308-378 (449)
159 TIGR01639 P_fal_TIGR01639 Plas 39.4 35 0.00075 22.1 2.6 33 277-309 7-39 (61)
160 PF07879 PHB_acc_N: PHB/PHA ac 37.3 59 0.0013 21.3 3.3 39 269-308 10-58 (64)
161 PLN02222 phosphoinositide phos 36.6 82 0.0018 30.9 5.6 65 100-166 25-91 (581)
162 PLN02228 Phosphoinositide phos 35.1 99 0.0021 30.2 5.9 62 262-326 24-91 (567)
163 PLN02222 phosphoinositide phos 35.0 86 0.0019 30.7 5.5 61 262-325 25-88 (581)
164 PLN02228 Phosphoinositide phos 35.0 1E+02 0.0022 30.1 5.9 65 100-166 24-93 (567)
165 KOG1264|consensus 34.2 91 0.002 31.6 5.4 144 11-169 144-297 (1267)
166 TIGR01848 PHA_reg_PhaR polyhyd 33.8 1.3E+02 0.0028 22.0 4.9 50 269-319 10-69 (107)
167 PF07308 DUF1456: Protein of u 33.5 1.1E+02 0.0024 20.3 4.3 30 281-310 15-44 (68)
168 PRK09430 djlA Dna-J like membr 33.3 3.3E+02 0.0071 23.7 10.0 109 112-228 67-175 (267)
169 PF02761 Cbl_N2: CBL proto-onc 32.7 88 0.0019 21.9 3.8 50 26-75 21-70 (85)
170 PF11867 DUF3387: Domain of un 32.2 1.8E+02 0.0038 26.4 6.9 109 181-291 100-226 (335)
171 KOG1264|consensus 30.6 2.4E+02 0.0053 28.8 7.6 147 97-250 141-296 (1267)
172 PF12419 DUF3670: SNF2 Helicas 29.8 79 0.0017 24.5 3.7 49 276-324 80-138 (141)
173 KOG4286|consensus 29.5 6.2E+02 0.013 25.8 10.3 135 103-250 423-583 (966)
174 PF08461 HTH_12: Ribonuclease 29.4 57 0.0012 21.5 2.4 55 276-339 10-64 (66)
175 PF01023 S_100: S-100/ICaBP ty 28.2 84 0.0018 18.8 2.8 31 98-128 4-36 (44)
176 PF09068 EF-hand_2: EF hand; 27.9 2.7E+02 0.0059 21.1 7.0 75 135-209 39-124 (127)
177 PF12174 RST: RCD1-SRO-TAF4 (R 26.9 43 0.00093 22.5 1.5 51 25-78 6-56 (70)
178 COG4103 Uncharacterized protei 26.5 1.8E+02 0.004 22.5 4.9 65 15-81 34-100 (148)
179 COG4103 Uncharacterized protei 25.2 1.5E+02 0.0034 22.9 4.3 55 266-323 34-90 (148)
180 PF04876 Tenui_NCP: Tenuivirus 24.5 3.5E+02 0.0075 21.2 6.3 60 102-169 56-115 (175)
181 PF08414 NADPH_Ox: Respiratory 23.7 1.4E+02 0.003 21.6 3.6 64 181-247 29-92 (100)
182 cd07311 terB_like_1 tellurium 23.0 2.5E+02 0.0055 22.0 5.4 96 195-307 36-133 (150)
183 PF08671 SinI: Anti-repressor 23.0 1.2E+02 0.0025 16.6 2.4 24 258-289 3-26 (30)
184 PF08100 Dimerisation: Dimeris 22.9 1.1E+02 0.0025 18.9 2.7 39 105-145 11-49 (51)
185 cd00086 homeodomain Homeodomai 22.8 1.9E+02 0.004 17.8 4.0 44 4-54 6-49 (59)
186 PLN02223 phosphoinositide phos 22.5 2.2E+02 0.0048 27.6 5.8 62 262-325 16-90 (537)
187 PF08044 DUF1707: Domain of un 22.3 1.2E+02 0.0027 19.0 2.8 31 24-54 20-50 (53)
188 PLN02230 phosphoinositide phos 21.7 2.1E+02 0.0045 28.3 5.5 63 10-73 28-100 (598)
189 cd07176 terB tellurite resista 21.6 1.5E+02 0.0033 21.2 3.8 17 25-41 16-32 (111)
190 PF12872 OST-HTH: OST-HTH/LOTU 21.1 2.5E+02 0.0054 18.4 4.5 50 262-325 8-57 (74)
191 PF14513 DAG_kinase_N: Diacylg 20.9 2.2E+02 0.0048 22.0 4.5 38 113-150 45-82 (138)
No 1
>KOG4223|consensus
Probab=100.00 E-value=1.9e-33 Score=236.26 Aligned_cols=255 Identities=50% Similarity=0.882 Sum_probs=223.6
Q ss_pred ccchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhh
Q psy3180 4 IVDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAA 83 (346)
Q Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~ 83 (346)
|.+.+.+.+|..++..+|.+++|+|+..|+..|+..........++...|..+|.|.||.|+|+|++..++.....
T Consensus 70 l~~ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~---- 145 (325)
T KOG4223|consen 70 LTPEESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDL---- 145 (325)
T ss_pred hCcchhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccC----
Confidence 4567789999999999999999999999999999988888888899999999999999999999998876653110
Q ss_pred hhhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHH
Q psy3180 84 ELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVD 163 (346)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 163 (346)
. ... .
T Consensus 146 -------------------------------------------~-~~~--~----------------------------- 150 (325)
T KOG4223|consen 146 -------------------------------------------P-DEF--P----------------------------- 150 (325)
T ss_pred -------------------------------------------c-ccc--c-----------------------------
Confidence 0 000 0
Q ss_pred HhhhhhcccccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHH
Q psy3180 164 AAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIG 243 (346)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~ 243 (346)
.......+.+++.+-+.-|+..|.|++|.+|.+||..+|.+..++.+.+..+..-+.-.|+|+||.|+++||+.
T Consensus 151 ------d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfig 224 (325)
T KOG4223|consen 151 ------DEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIG 224 (325)
T ss_pred ------cchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHh
Confidence 00112334455556688999999999999999999999999888889999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCCchhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHH
Q psy3180 244 DMFRGGDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323 (346)
Q Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~ 323 (346)
-|..... +...|.|+..-+..|..+.|+|++|+++.+|+++++...+......+++.|+...|.|+||+||++|.+.
T Consensus 225 d~~~~~~---~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 225 DLYSHEG---NEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILE 301 (325)
T ss_pred HHhhccC---CCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhh
Confidence 8888766 6788999988888998888999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcccccchhhhhcc-ccCC
Q psy3180 324 KYDLFVGSQATDFGEALVR-HDEF 346 (346)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~-~~~~ 346 (346)
++.+|++|+|+++|+.|.+ ||||
T Consensus 302 ~~d~FvgSqAtdyge~L~~~HDEl 325 (325)
T KOG4223|consen 302 HYDVFVGSQATDYGEDLDYFHDEL 325 (325)
T ss_pred CcceeeeeecccchhhcccccCCC
Confidence 9999999999999999999 9997
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.88 E-value=1.3e-21 Score=152.01 Aligned_cols=138 Identities=21% Similarity=0.304 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCc
Q psy3180 179 NMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELP 258 (346)
Q Consensus 179 ~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~ 258 (346)
.-..+++.+|..+|++++|.|+..+|..+++.++ ..++..++.+++..+|. +.+.|+|++|+..|...... ..+
T Consensus 17 ~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg-~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~----~~~ 90 (160)
T COG5126 17 EQIQELKEAFQLFDRDSDGLIDRNELGKILRSLG-FNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKR----GDK 90 (160)
T ss_pred HHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcC-CCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhcc----CCc
Confidence 3456779999999999999999999999999886 46888999999999999 88999999999999876641 111
Q ss_pred hhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHH
Q psy3180 259 DWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKY 325 (346)
Q Consensus 259 ~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~ 325 (346)
.+.++.||+.| |.|++|+|+..|++++++.+|..+++++++.++..+|.|++|.|+|++|++.+
T Consensus 91 --~Eel~~aF~~f-D~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~ 154 (160)
T COG5126 91 --EEELREAFKLF-DKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLI 154 (160)
T ss_pred --HHHHHHHHHHh-CCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHH
Confidence 35899999999 99999999999999999999999999999999999999999999999999843
No 3
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.87 E-value=8.7e-22 Score=152.90 Aligned_cols=142 Identities=15% Similarity=0.244 Sum_probs=130.2
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhh
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAE 84 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~ 84 (346)
+++++.++++++|..+|+|++|.|++.||..+++.++...+...+..++..+|. +.|.|+|.+|+..+...+.....
T Consensus 14 ~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~-- 90 (160)
T COG5126 14 LTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDK-- 90 (160)
T ss_pred CCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCc--
Confidence 567889999999999999999999999999999999999999999999999999 99999999999998765543222
Q ss_pred hhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHH
Q psy3180 85 LAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDA 164 (346)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 164 (346)
..+++.+|+.||.+++|+|+..++..++...+. .+++.++..+++.+|.+++|.|+|++|+..+.
T Consensus 91 --------------~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge-~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 91 --------------EEELREAFKLFDKDHDGYISIGELRRVLKSLGE-RLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred --------------HHHHHHHHHHhCCCCCceecHHHHHHHHHhhcc-cCCHHHHHHHHHhcCCCCCceEeHHHHHHHHh
Confidence 466899999999999999999999999998755 89999999999999999999999999998764
No 4
>KOG0027|consensus
Probab=99.87 E-value=2.1e-21 Score=154.42 Aligned_cols=142 Identities=27% Similarity=0.448 Sum_probs=126.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchh
Q psy3180 181 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDW 260 (346)
Q Consensus 181 ~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~ 260 (346)
...++.+|..||++++|+|+..|+..+++.++ ..++..++..++..+|.+++|.|++.+|+..+........... ..
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg-~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~--~~ 83 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLG-QNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE--AS 83 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcC-CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc--cc
Confidence 45668999999999999999999999999997 4689999999999999999999999999998887655222111 12
Q ss_pred HHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHh
Q psy3180 261 VKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYD 326 (346)
Q Consensus 261 ~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~ 326 (346)
...++.||+.| |.|++|+||..||+++|..+|.+++.+++..+++.+|.|+||.|+|+||+..+.
T Consensus 84 ~~el~eaF~~f-D~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 84 SEELKEAFRVF-DKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred HHHHHHHHHHH-ccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 35899999999 999999999999999999999999999999999999999999999999998543
No 5
>KOG0027|consensus
Probab=99.86 E-value=2.2e-21 Score=154.32 Aligned_cols=147 Identities=20% Similarity=0.276 Sum_probs=130.0
Q ss_pred chhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhhh
Q psy3180 6 DKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAEL 85 (346)
Q Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~ 85 (346)
..+....++.+|..||+|++|+|+..|+..+++.++..++..++..+++.+|.+++|.|+++||+..+..........+
T Consensus 3 ~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~- 81 (151)
T KOG0027|consen 3 SEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE- 81 (151)
T ss_pred CHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc-
Confidence 4567788999999999999999999999999999999999999999999999999999999999998876443322110
Q ss_pred hccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHh
Q psy3180 86 AKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAA 165 (346)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 165 (346)
.....++++|+.+|.+|+|+|+..||+.+|...+. ..+..++..+++.+|.|+||.|+|++|+..+..
T Consensus 82 -----------~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~-~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 82 -----------ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGE-KLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred -----------ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCC-cCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 12457899999999999999999999999998865 677999999999999999999999999998754
No 6
>PTZ00183 centrin; Provisional
Probab=99.79 E-value=1.1e-18 Score=140.36 Aligned_cols=144 Identities=16% Similarity=0.213 Sum_probs=124.4
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhh
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAE 84 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~ 84 (346)
+++...+.+..+|..+|.+++|.|+..||..++..++...+...+..+|..+|.+++|.|+|+||+..+........
T Consensus 11 ~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~--- 87 (158)
T PTZ00183 11 LTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERD--- 87 (158)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCC---
Confidence 35667788999999999999999999999999999887777788999999999999999999999987764321110
Q ss_pred hhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHH
Q psy3180 85 LAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDA 164 (346)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 164 (346)
....++.+|..+|.+++|+|+..||..++...+ ..++..++..++..+|.+++|.|++++|+.++.
T Consensus 88 -------------~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 88 -------------PREEILKAFRLFDDDKTGKISLKNLKRVAKELG-ETITDEELQEMIDEADRNGDGEISEEEFYRIMK 153 (158)
T ss_pred -------------cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 124578999999999999999999999998653 368899999999999999999999999998875
Q ss_pred h
Q psy3180 165 A 165 (346)
Q Consensus 165 ~ 165 (346)
.
T Consensus 154 ~ 154 (158)
T PTZ00183 154 K 154 (158)
T ss_pred c
Confidence 4
No 7
>PTZ00184 calmodulin; Provisional
Probab=99.78 E-value=2.2e-18 Score=137.18 Aligned_cols=143 Identities=17% Similarity=0.256 Sum_probs=124.0
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhh
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAE 84 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~ 84 (346)
++.+..+.++.+|..+|.+++|.|+..||..++..++...+..++..+|..+|.+++|.|+|+||+..+........
T Consensus 5 ~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~--- 81 (149)
T PTZ00184 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD--- 81 (149)
T ss_pred cCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc---
Confidence 35677788999999999999999999999999999888778888999999999999999999999988765432110
Q ss_pred hhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHH
Q psy3180 85 LAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDA 164 (346)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 164 (346)
....++.+|..+|.+++|+|+..+|..++...+ +.++...+..++..+|.+++|.|+|+||+.++.
T Consensus 82 -------------~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 82 -------------SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred -------------HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHC-CCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 124568899999999999999999999998753 367889999999999999999999999998764
No 8
>KOG0028|consensus
Probab=99.78 E-value=2e-18 Score=130.76 Aligned_cols=144 Identities=20% Similarity=0.266 Sum_probs=131.7
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhh
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAE 84 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~ 84 (346)
..+++++.++.+|..||.+++|+|+..||..+++.+|+.+...++..++..+|.++.|+|++++|...+...+...+.
T Consensus 27 l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt-- 104 (172)
T KOG0028|consen 27 LTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDT-- 104 (172)
T ss_pred ccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCc--
Confidence 356778899999999999999999999999999999999999999999999999999999999999998776655432
Q ss_pred hhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHH
Q psy3180 85 LAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDA 164 (346)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 164 (346)
...++.+|+.+|.+++|.||..+|+.+...+ ++.+++.++..++..+|.+++|.|+-+||...+.
T Consensus 105 --------------~eEi~~afrl~D~D~~Gkis~~~lkrvakeL-genltD~El~eMIeEAd~d~dgevneeEF~~imk 169 (172)
T KOG0028|consen 105 --------------KEEIKKAFRLFDDDKTGKISQRNLKRVAKEL-GENLTDEELMEMIEEADRDGDGEVNEEEFIRIMK 169 (172)
T ss_pred --------------HHHHHHHHHcccccCCCCcCHHHHHHHHHHh-CccccHHHHHHHHHHhcccccccccHHHHHHHHh
Confidence 5678999999999999999999999999987 4589999999999999999999999999998875
Q ss_pred h
Q psy3180 165 A 165 (346)
Q Consensus 165 ~ 165 (346)
.
T Consensus 170 ~ 170 (172)
T KOG0028|consen 170 K 170 (172)
T ss_pred c
Confidence 3
No 9
>KOG4251|consensus
Probab=99.77 E-value=7e-18 Score=136.39 Aligned_cols=262 Identities=28% Similarity=0.481 Sum_probs=183.0
Q ss_pred chhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhc---ccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhh
Q psy3180 6 DKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQK---RYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDA 82 (346)
Q Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~---~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~ 82 (346)
|....+.|+.+|+..|.|-+|+||..|+++|+..... +...++.+..|+.+|.|+||.|+|+||-..+...-..
T Consensus 96 prrsrrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskgh--- 172 (362)
T KOG4251|consen 96 PRRSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGH--- 172 (362)
T ss_pred hhHHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCc---
Confidence 4566788999999999999999999999999986322 2344677888999999999999999997765431110
Q ss_pred hhhhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHH
Q psy3180 83 AELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEV 162 (346)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~ 162 (346)
+..+....++......+.++ - .+|+
T Consensus 173 -----------------------------------sekevadairlneelkVDeE-t-----------------qevl-- 197 (362)
T KOG4251|consen 173 -----------------------------------SEKEVADAIRLNEELKVDEE-T-----------------QEVL-- 197 (362)
T ss_pred -----------------------------------chHHHHHHhhccCcccccHH-H-----------------HHHH--
Confidence 11222222221111111111 0 0111
Q ss_pred HHhhhhhcccccchHHHHHHHHHHHHHHhcC-CCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHH
Q psy3180 163 DAAELAKDEDQGFSYKNMLNRDKRRWDVADI-DGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREY 241 (346)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~-~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF 241 (346)
..++.-+...|. ..+-.++..|+..+|.+......-...+..+++.+|.|+|..++..+|
T Consensus 198 -------------------enlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeF 258 (362)
T KOG4251|consen 198 -------------------ENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEF 258 (362)
T ss_pred -------------------HhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhh
Confidence 111112222222 223356677777777765434445566788888889999999999999
Q ss_pred HHHhhcC-CCCCCCCCCchhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHH
Q psy3180 242 IGDMFRG-GDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDE 320 (346)
Q Consensus 242 ~~~l~~~-~~~~~~~~~~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~e 320 (346)
+...-.- ......+....|.+.-++.|...||.+.+|.+|.+|+..++......++-.++..++...|.|++.+++.+|
T Consensus 259 islpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~~alne~~~~ma~~d~n~~~~Ls~ee 338 (362)
T KOG4251|consen 259 ISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFRLALNEVNDIMALTDANNDEKLSLEE 338 (362)
T ss_pred hcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhhhhHHHHHHHHhhhccCCCcccCHHH
Confidence 8744322 222335667788889999999888999999999999999998888888888899999999999999999999
Q ss_pred HHHHHhhhhcccccchhhhhccccCC
Q psy3180 321 ILAKYDLFVGSQATDFGEALVRHDEF 346 (346)
Q Consensus 321 F~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (346)
.++.--.+-+|...+.+.- +||||
T Consensus 339 ll~r~~~~~rSsLlsarsS--lHdEm 362 (362)
T KOG4251|consen 339 LLERDWLLARSSLLSARSS--LHDEM 362 (362)
T ss_pred HHHHHhhhcccHHHHHHHh--hhhcC
Confidence 9998888888877776654 36665
No 10
>KOG0037|consensus
Probab=99.77 E-value=6.5e-18 Score=135.19 Aligned_cols=154 Identities=12% Similarity=0.140 Sum_probs=139.0
Q ss_pred chhhhhhhhHhhccCCCCccCHHHHHHHHH-HhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhhhhc
Q psy3180 9 DKDKDGLIVDKIDKDKDGFVSKEELKEWIQ-FTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAELAK 87 (346)
Q Consensus 9 ~~~~l~~~F~~~D~d~~G~is~~E~~~~l~-~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~~~ 87 (346)
....+...|...|+|++|+|+.+|++.+|. .-......+.+..++..+|.+.+|+|++.||...|..
T Consensus 55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~------------ 122 (221)
T KOG0037|consen 55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKY------------ 122 (221)
T ss_pred ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH------------
Confidence 456788999999999999999999999998 3445567889999999999999999999999998876
Q ss_pred cccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhh
Q psy3180 88 DEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAEL 167 (346)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 167 (346)
++..+.+|+.+|+|++|.|+..||+.+|..++. .+++..++.+++.+|.-+.|.|.|++|+.++..+.
T Consensus 123 -----------i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy-~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~ 190 (221)
T KOG0037|consen 123 -----------INQWRNVFRTYDRDRSGTIDSSELRQALTQLGY-RLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQ 190 (221)
T ss_pred -----------HHHHHHHHHhcccCCCCcccHHHHHHHHHHcCc-CCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHH
Confidence 677899999999999999999999999999876 89999999999999998899999999999997665
Q ss_pred hhcccccchHHHHHHHHHHHHHHhcCCCCCCcCH
Q psy3180 168 AKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTR 201 (346)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~is~ 201 (346)
.. ..+|+..|.+..|.|+.
T Consensus 191 ~l---------------t~~Fr~~D~~q~G~i~~ 209 (221)
T KOG0037|consen 191 RL---------------TEAFRRRDTAQQGSITI 209 (221)
T ss_pred HH---------------HHHHHHhccccceeEEE
Confidence 55 88999999999998654
No 11
>KOG2643|consensus
Probab=99.76 E-value=4.3e-18 Score=148.64 Aligned_cols=231 Identities=15% Similarity=0.174 Sum_probs=169.2
Q ss_pred cCCCCCCcccHHHHHHHHhccchhhhhhhhhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcC---Cccch
Q psy3180 56 HNPEDKEKITWDEYREKVYGFLDEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLH---PEETA 132 (346)
Q Consensus 56 ~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~---~~~~~ 132 (346)
++.+.+|.|+|.||+-.+.-...+ ....+-+|+.||.||||-|+.+||..+.+ .....
T Consensus 208 ~~lg~~GLIsfSdYiFLlTlLS~p-------------------~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~ 268 (489)
T KOG2643|consen 208 YKLGESGLISFSDYIFLLTLLSIP-------------------ERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSV 268 (489)
T ss_pred EEcCCCCeeeHHHHHHHHHHHccC-------------------cccceeeeeeeecCCCCcccHHHHHHHHHHHHhcccc
Confidence 466778999999999876654333 23356699999999999999999987764 11000
Q ss_pred -----------hhhHHHHHH--HHhhhccCCCCcccHHHHHHHHHhhhhhcccccchHHHHHHHHHHHHHHhcCCCCCCc
Q psy3180 133 -----------HMRDLVVVE--TMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRAL 199 (346)
Q Consensus 133 -----------~~~~~~~~~--~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~i 199 (346)
.....++.. ....|.+++++++++++|+.++..+... -++--|..+|+..+|.|
T Consensus 269 g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq~E-------------il~lEF~~~~~~~~g~I 335 (489)
T KOG2643|consen 269 GVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQENLQEE-------------ILELEFERFDKGDSGAI 335 (489)
T ss_pred ceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHHHHHHHH-------------HHHHHHHHhCccccccc
Confidence 001111222 2345899999999999999999776554 22557999999999999
Q ss_pred CHHHHHhhcCcCcccc--CcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchhHHHHHHHhhhhhcCCCC
Q psy3180 200 TREEFASFLHPEETAH--MRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYRDKNGD 277 (346)
Q Consensus 200 s~~e~~~~l~~~~~~~--~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~~~~~~~~F~~~~D~d~~ 277 (346)
+..+|..++-...... -......++.+.+..+ +-.|++.||.++..-... +..+..|..-| ...+
T Consensus 336 se~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~-~~gISl~Ef~~Ff~Fl~~----------l~dfd~Al~fy--~~Ag 402 (489)
T KOG2643|consen 336 SEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD-GKGISLQEFKAFFRFLNN----------LNDFDIALRFY--HMAG 402 (489)
T ss_pred CHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC-CCCcCHHHHHHHHHHHhh----------hhHHHHHHHHH--HHcC
Confidence 9999999887643211 1122356666677655 345999999987655444 33555555544 3457
Q ss_pred CCCCHHHHHhhcCCC-CCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhhcc
Q psy3180 278 GFMDEEEVKNWILPP-DFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFVGS 331 (346)
Q Consensus 278 G~Is~~E~~~~l~~~-~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~~~ 331 (346)
+.|+..+|+++.... |+.+++..++.+|+.||.|+||.||++||+..+..+.+.
T Consensus 403 ~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~Rmhr 457 (489)
T KOG2643|consen 403 ASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKRRMHR 457 (489)
T ss_pred CCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHHHhhc
Confidence 899999999998654 799998899999999999999999999999988876654
No 12
>PTZ00184 calmodulin; Provisional
Probab=99.75 E-value=2.1e-17 Score=131.49 Aligned_cols=138 Identities=22% Similarity=0.417 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCch
Q psy3180 180 MLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPD 259 (346)
Q Consensus 180 ~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~ 259 (346)
....++..|..+|.+++|.|+..||..++...+ ..++...+..+++.+|.+++|.|+|++|+..+...... ..
T Consensus 9 ~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~------~~ 81 (149)
T PTZ00184 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKD------TD 81 (149)
T ss_pred HHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhC-CCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccC------Cc
Confidence 345668899999999999999999999998765 34667789999999999999999999999987754321 01
Q ss_pred hHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHH
Q psy3180 260 WVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKY 325 (346)
Q Consensus 260 ~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~ 325 (346)
....+..+|..+ |.+++|+|+.+||+.++..+|..++.+++..++..+|.+++|+|+|+||+..+
T Consensus 82 ~~~~~~~~F~~~-D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 146 (149)
T PTZ00184 82 SEEEIKEAFKVF-DRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146 (149)
T ss_pred HHHHHHHHHHhh-CCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHH
Confidence 234688999999 99999999999999999999999999999999999999999999999999754
No 13
>KOG0036|consensus
Probab=99.75 E-value=1.1e-17 Score=145.30 Aligned_cols=154 Identities=18% Similarity=0.161 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCch
Q psy3180 180 MLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPD 259 (346)
Q Consensus 180 ~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~ 259 (346)
...+++.+|+.+|.+++|.++..++.+.+..+..++........+++.+|.|.+|.++|.||...+.....
T Consensus 12 r~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E~--------- 82 (463)
T KOG0036|consen 12 RDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKEL--------- 82 (463)
T ss_pred HHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhHH---------
Confidence 34466899999999999999999999998887766677888999999999999999999999999987555
Q ss_pred hHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhh------------
Q psy3180 260 WVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDL------------ 327 (346)
Q Consensus 260 ~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~------------ 327 (346)
.+...|..+ |.++||.|..+|+.+.|+.+|..++++++..++..+|.++++.|+++||.+++.+
T Consensus 83 ---~l~~~F~~i-D~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p~s~i~di~~~ 158 (463)
T KOG0036|consen 83 ---ELYRIFQSI-DLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYPESDLEDIYDF 158 (463)
T ss_pred ---HHHHHHhhh-ccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCChhHHHHHHHh
Confidence 789999997 9999999999999999999999999999999999999999999999999998766
Q ss_pred hhcccccchhhhhccccCC
Q psy3180 328 FVGSQATDFGEALVRHDEF 346 (346)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~ 346 (346)
|.++...|+||...+||+|
T Consensus 159 W~h~~~idigE~~~iPdg~ 177 (463)
T KOG0036|consen 159 WRHVLLIDIGEDAVLPDGD 177 (463)
T ss_pred hhhheEEEccccccCCcch
Confidence 5677779999999999986
No 14
>PTZ00183 centrin; Provisional
Probab=99.75 E-value=3.3e-17 Score=131.78 Aligned_cols=139 Identities=17% Similarity=0.291 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCch
Q psy3180 180 MLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPD 259 (346)
Q Consensus 180 ~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~ 259 (346)
....+..+|..+|.+++|.|+..||..++...+. .++...+..++..+|.+++|.|+|.||+..+...... ..
T Consensus 15 ~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~-~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~---~~--- 87 (158)
T PTZ00183 15 QKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGF-EPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGE---RD--- 87 (158)
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcC---CC---
Confidence 3456688999999999999999999999998753 4677789999999999999999999999877653221 11
Q ss_pred hHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHh
Q psy3180 260 WVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYD 326 (346)
Q Consensus 260 ~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~ 326 (346)
....++.+|+.+ |.+++|.|+..||+.++..+|..++..++..++..+|.|++|.|+|++|+..+.
T Consensus 88 ~~~~l~~~F~~~-D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 88 PREEILKAFRLF-DDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMK 153 (158)
T ss_pred cHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 125789999998 999999999999999999999999999999999999999999999999998653
No 15
>KOG0037|consensus
Probab=99.74 E-value=4.4e-17 Score=130.42 Aligned_cols=134 Identities=13% Similarity=0.192 Sum_probs=123.8
Q ss_pred HHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchh
Q psy3180 181 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDW 260 (346)
Q Consensus 181 ~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~ 260 (346)
...+...|...|++.+|.|+.+|+..+|.+....+.+.+.+..|+..+|.+.+|.|.+.||...+..
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~------------- 122 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKY------------- 122 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH-------------
Confidence 3455788999999999999999999999988888999999999999999999999999999987766
Q ss_pred HHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh
Q psy3180 261 VKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLF 328 (346)
Q Consensus 261 ~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~ 328 (346)
++.|+.+|+.| |.|++|.|+..||+++|..+|..++++-.+.|++++|.-++|+|.+++|+..-..+
T Consensus 123 i~~Wr~vF~~~-D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L 189 (221)
T KOG0037|consen 123 INQWRNVFRTY-DRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL 189 (221)
T ss_pred HHHHHHHHHhc-ccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHH
Confidence 56899999999 99999999999999999999999999999999999998889999999999855443
No 16
>KOG4223|consensus
Probab=99.73 E-value=8.4e-17 Score=136.19 Aligned_cols=192 Identities=35% Similarity=0.542 Sum_probs=153.0
Q ss_pred hhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhhhhccc
Q psy3180 10 KDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAELAKDE 89 (346)
Q Consensus 10 ~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~ 89 (346)
.+...+.|...|+|.+|.|+.+|...+...... .+.+ ..+.
T Consensus 112 ~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~--~~~~-------------------------------------~~d~ 152 (325)
T KOG4223|consen 112 VEEAARRWDEYDKNKDGFITWEEYLPQTYGRVD--LPDE-------------------------------------FPDE 152 (325)
T ss_pred HHHHHHHHHHhccCccceeeHHHhhhhhhhccc--Cccc-------------------------------------cccc
Confidence 345567788899999999999999987665433 1111 0112
Q ss_pred cchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhh
Q psy3180 90 DQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAK 169 (346)
Q Consensus 90 ~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~ 169 (346)
+...++++++.+-++.|+..|.|++|.++.+||..+|.|-.++.+.+-.+...+.-.|+|+||.|+++||+.-+......
T Consensus 153 e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~ 232 (325)
T KOG4223|consen 153 EDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGN 232 (325)
T ss_pred hhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCC
Confidence 23456777888899999999999999999999999999999999999999999999999999999999999877655442
Q ss_pred cccccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHh
Q psy3180 170 DEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDM 245 (346)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l 245 (346)
.. .+. .....-.+.+...|+|++|+|+..|+.+.+.+.. ......++..|+...|.|+||++|++|.+...
T Consensus 233 ~~--epe--Wv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~-~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~~ 303 (325)
T KOG4223|consen 233 EE--EPE--WVLTEREQFFEFRDKNKDGKLDGDELLDWILPSE-QDHAKAEARHLLHEADEDKDGKLSKEEILEHY 303 (325)
T ss_pred CC--Ccc--cccccHHHHHHHhhcCCCCccCHHHHhcccCCCC-ccHHHHHHHHHhhhhccCccccccHHHHhhCc
Confidence 11 011 1111224567788999999999999999999986 45777889999999999999999999998844
No 17
>KOG0028|consensus
Probab=99.71 E-value=1.3e-16 Score=120.91 Aligned_cols=139 Identities=17% Similarity=0.251 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCc
Q psy3180 179 NMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELP 258 (346)
Q Consensus 179 ~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~ 258 (346)
.....++.+|..||.+++|+|..+||.-++.+.|. .+...++..++..+|.++.|.|++++|...+...... ..
T Consensus 30 ~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGF-E~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e----~d- 103 (172)
T KOG0028|consen 30 EQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGF-EPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGE----RD- 103 (172)
T ss_pred HHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCC-CcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhc----cC-
Confidence 34456689999999999999999999999999985 5778899999999999999999999999987664441 11
Q ss_pred hhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHH
Q psy3180 259 DWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKY 325 (346)
Q Consensus 259 ~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~ 325 (346)
....++.+|+.+ |-|++|.||..+|+.+.+.+|..++++++..++..+|++++|.|+-+||+..+
T Consensus 104 -t~eEi~~afrl~-D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~im 168 (172)
T KOG0028|consen 104 -TKEEIKKAFRLF-DDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIM 168 (172)
T ss_pred -cHHHHHHHHHcc-cccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHH
Confidence 136899999998 99999999999999999999999999999999999999999999999998753
No 18
>KOG2643|consensus
Probab=99.69 E-value=4.1e-16 Score=136.36 Aligned_cols=209 Identities=16% Similarity=0.188 Sum_probs=158.1
Q ss_pred hchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcc----------cccchH-------HHhhhhcCCCCCCcccHHHHH
Q psy3180 8 IDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKR----------YIHNDV-------ESQWRTHNPEDKEKITWDEYR 70 (346)
Q Consensus 8 ~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~----------~~~~~~-------~~~~~~~D~~~dg~i~~~EF~ 70 (346)
...+.++.+|++||.||||-|+.+||..+.+-.-.+ ++.... .-....+..+++|+++++||+
T Consensus 230 ~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~ 309 (489)
T KOG2643|consen 230 IPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFL 309 (489)
T ss_pred cCcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHH
Confidence 345678999999999999999999999887532111 111111 125667899999999999999
Q ss_pred HHHhccchhhhhhhhhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccch--hhhHHHHHHHHhhhcc
Q psy3180 71 EKVYGFLDEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETA--HMRDLVVVETMEDIDK 148 (346)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~--~~~~~~~~~~~~~~d~ 148 (346)
.+..+...+ .++--|..+|+..+|.|+..+|+.+|-..... .-....+.++-+.++.
T Consensus 310 ~F~e~Lq~E---------------------il~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~ 368 (489)
T KOG2643|consen 310 KFQENLQEE---------------------ILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKD 368 (489)
T ss_pred HHHHHHHHH---------------------HHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccC
Confidence 998775433 34567899999999999999999988755421 2234457777777777
Q ss_pred CCCCcccHHHHHHHHHhhhhhcccccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhh
Q psy3180 149 DKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDI 228 (346)
Q Consensus 149 ~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~ 228 (346)
. +..||++||.+++.-+.... .. ..|...|- ...+.|+..+|+++........+++..+..++..|
T Consensus 369 ~-~~gISl~Ef~~Ff~Fl~~l~---df---------d~Al~fy~-~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IF 434 (489)
T KOG2643|consen 369 D-GKGISLQEFKAFFRFLNNLN---DF---------DIALRFYH-MAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIF 434 (489)
T ss_pred C-CCCcCHHHHHHHHHHHhhhh---HH---------HHHHHHHH-HcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEE
Confidence 6 56699999999998776661 11 11222221 23468999999999998767789988999999999
Q ss_pred CCCCCCcccHHHHHHHhhcCCCC
Q psy3180 229 DKDKDGKVSLREYIGDMFRGGDT 251 (346)
Q Consensus 229 d~~~dg~i~~~eF~~~l~~~~~~ 251 (346)
|.|+||.++++||+..|.+.+..
T Consensus 435 D~N~Dg~LS~~EFl~Vmk~Rmhr 457 (489)
T KOG2643|consen 435 DENNDGTLSHKEFLAVMKRRMHR 457 (489)
T ss_pred ccCCCCcccHHHHHHHHHHHhhc
Confidence 99999999999999999876653
No 19
>KOG0031|consensus
Probab=99.65 E-value=1.7e-15 Score=114.02 Aligned_cols=138 Identities=16% Similarity=0.254 Sum_probs=125.7
Q ss_pred chhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhhh
Q psy3180 6 DKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAEL 85 (346)
Q Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~ 85 (346)
.+-+.+.++++|..+|.|+||+|++++++..+..+|...+++++..++... .|-|+|.-|+.++-..+...++.++
T Consensus 27 ~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~gtdpe~~ 102 (171)
T KOG0031|consen 27 DQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMFGEKLNGTDPEEV 102 (171)
T ss_pred hHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhcCCCHHHH
Confidence 456788999999999999999999999999999999999999999998765 6799999999999888887766444
Q ss_pred hccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHH
Q psy3180 86 AKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDA 164 (346)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 164 (346)
+..+|+.||.++.|.|..+.++.+|... ...++++++..+++.+-.+..|.++|.+|+..+.
T Consensus 103 ----------------I~~AF~~FD~~~~G~I~~d~lre~Ltt~-gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 103 ----------------ILNAFKTFDDEGSGKIDEDYLRELLTTM-GDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred ----------------HHHHHHhcCccCCCccCHHHHHHHHHHh-cccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 8999999999999999999999999987 4489999999999999999999999999998876
No 20
>KOG0031|consensus
Probab=99.65 E-value=3.8e-15 Score=112.16 Aligned_cols=135 Identities=14% Similarity=0.222 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCc
Q psy3180 179 NMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELP 258 (346)
Q Consensus 179 ~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~ 258 (346)
..+.+++.+|..+|.|.+|.|..++++..+..+|. .++++++..+++.. .|-|+|.-|+..+...+. ...|
T Consensus 29 ~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk-~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~----gtdp 99 (171)
T KOG0031|consen 29 SQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGK-IASDEELDAMMKEA----PGPINFTVFLTMFGEKLN----GTDP 99 (171)
T ss_pred HHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCC-CCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhc----CCCH
Confidence 34567799999999999999999999999999985 48999999999776 688999999998887666 2333
Q ss_pred hhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHH
Q psy3180 259 DWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKY 325 (346)
Q Consensus 259 ~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~ 325 (346)
+ +.+..||+.| |.+++|.|..+.|+.+|...|-.+++++++.+|+.+-.+..|.|+|..|+...
T Consensus 100 e--~~I~~AF~~F-D~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~i 163 (171)
T KOG0031|consen 100 E--EVILNAFKTF-DDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYII 163 (171)
T ss_pred H--HHHHHHHHhc-CccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHH
Confidence 3 5899999998 99999999999999999999999999999999999999999999999999743
No 21
>KOG0030|consensus
Probab=99.64 E-value=1.2e-15 Score=112.85 Aligned_cols=136 Identities=12% Similarity=0.205 Sum_probs=118.4
Q ss_pred HHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCC--CCCcccHHHHHHHhhcCCCCCCCCCCch
Q psy3180 182 NRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKD--KDGKVSLREYIGDMFRGGDTDGDEELPD 259 (346)
Q Consensus 182 ~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~--~dg~i~~~eF~~~l~~~~~~~~~~~~~~ 259 (346)
..++.+|..||..++|.|+..+...+|+++| ..++..++.+.+.....+ +--+|+|++|+..+....+. ..+.
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG-~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vakn----k~q~ 85 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVGDVLRALG-QNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKN----KDQG 85 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHHHhc-CCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhc----cccC
Confidence 5669999999999999999999999999997 578888999998888776 44689999999987766553 2233
Q ss_pred hHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHH
Q psy3180 260 WVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAK 324 (346)
Q Consensus 260 ~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~ 324 (346)
..++..+.++.| |++|+|.|...|++++|..+|..+++++++.+++-.- |.+|.|.|+.|++.
T Consensus 86 t~edfvegLrvF-Dkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~e-D~nG~i~YE~fVk~ 148 (152)
T KOG0030|consen 86 TYEDFVEGLRVF-DKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQE-DSNGCINYEAFVKH 148 (152)
T ss_pred cHHHHHHHHHhh-cccCCcceeHHHHHHHHHHHHhhccHHHHHHHHcccc-ccCCcCcHHHHHHH
Confidence 346778889998 9999999999999999999999999999999999876 78899999999985
No 22
>KOG0030|consensus
Probab=99.60 E-value=6.5e-15 Score=108.98 Aligned_cols=140 Identities=12% Similarity=0.221 Sum_probs=120.6
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccC--CCCcccHHHHHHHHHhhhhhcccccch
Q psy3180 99 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKD--KDGKVSLREYIEVDAAELAKDEDQGFS 176 (346)
Q Consensus 99 ~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~--~dg~i~~~eF~~~~~~~~~~~~~~~~~ 176 (346)
...++.+|..||..++|.|+..+...+|+.++. +++..++.+.+...+++ +-.+|+|++|+..+..+... ....+
T Consensus 10 ~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~-nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vakn--k~q~t 86 (152)
T KOG0030|consen 10 MEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQ-NPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKN--KDQGT 86 (152)
T ss_pred HHHHHHHHHHHhccCcccccHHHHHHHHHHhcC-CCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhc--cccCc
Confidence 467899999999999999999999999999866 88999999999998887 55789999999999888776 22233
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhc
Q psy3180 177 YKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFR 247 (346)
Q Consensus 177 ~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~ 247 (346)
+ .....-.+.||++++|.|...|++++|..+| .+++++++..+++.. .|.+|.|+|+.|++.+..
T Consensus 87 ~----edfvegLrvFDkeg~G~i~~aeLRhvLttlG-ekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 87 Y----EDFVEGLRVFDKEGNGTIMGAELRHVLTTLG-EKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIMS 151 (152)
T ss_pred H----HHHHHHHHhhcccCCcceeHHHHHHHHHHHH-hhccHHHHHHHHccc-cccCCcCcHHHHHHHHhc
Confidence 3 2335677899999999999999999999997 579999999999887 578899999999987653
No 23
>KOG0034|consensus
Probab=99.56 E-value=4.6e-14 Score=113.92 Aligned_cols=137 Identities=26% Similarity=0.375 Sum_probs=112.7
Q ss_pred HHHHHHHHHHhccC-CCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCc-ccHHHHHHHHHhhhhhcccccch
Q psy3180 99 LNRDKRRWDVADID-GDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGK-VSLREYIEVDAAELAKDEDQGFS 176 (346)
Q Consensus 99 ~~~l~~~F~~~D~~-~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~-i~~~eF~~~~~~~~~~~~~~~~~ 176 (346)
+..+...|..+|.+ +.|+|+.+||..+.....+ -....++..++.+++|. |++++|+..++.......
T Consensus 32 I~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~N-----p~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~----- 101 (187)
T KOG0034|consen 32 IERLYERFKKLDRNNGDGYLTKEEFLSIPELALN-----PLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKAS----- 101 (187)
T ss_pred HHHHHHHHHHhccccccCccCHHHHHHHHHHhcC-----cHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCcc-----
Confidence 56788999999999 9999999999999853333 24567788899988888 999999999988877721
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccC------cHHHHHHHHhhhCCCCCCcccHHHHHHHhhcC
Q psy3180 177 YKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHM------RDLVVVETMEDIDKDKDGKVSLREYIGDMFRG 248 (346)
Q Consensus 177 ~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~------~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~ 248 (346)
...+++-+|+.||.+++|+|+.+|+.+++........ -...++.++..+|.++||.|+++||...+...
T Consensus 102 ---~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 102 ---KREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred ---HHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 1246688999999999999999999999987543222 23457888899999999999999999988775
No 24
>KOG0044|consensus
Probab=99.53 E-value=7.4e-14 Score=112.71 Aligned_cols=139 Identities=22% Similarity=0.274 Sum_probs=114.3
Q ss_pred HHHHHHHHHhccC-CCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhcccccchHH
Q psy3180 100 NRDKRRWDVADID-GDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFSYK 178 (346)
Q Consensus 100 ~~l~~~F~~~D~~-~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~ 178 (346)
.++++.|+.|-.+ .+|.++..+|+.++.......-.......+|+.+|.|++|.|++.||+..++..+..
T Consensus 26 ~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rG--------- 96 (193)
T KOG0044|consen 26 KEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRG--------- 96 (193)
T ss_pred HHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCC---------
Confidence 5567777777666 489999999999999765435566778899999999999999999999999988877
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcC----cc------ccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhc
Q psy3180 179 NMLNRDKRRWDVADIDGDRALTREEFASFLHPE----ET------AHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFR 247 (346)
Q Consensus 179 ~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~----~~------~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~ 247 (346)
...+.++.+|++||.+++|+|+..|+..++... +. .......+..+|+.+|.|.||.|+++||+.....
T Consensus 97 t~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 97 TLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred cHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 344556788999999999999999999888641 11 2224567899999999999999999999987755
No 25
>KOG0034|consensus
Probab=99.53 E-value=1.1e-13 Score=111.66 Aligned_cols=142 Identities=20% Similarity=0.339 Sum_probs=115.9
Q ss_pred cchhchhhhhhhhHhhccC-CCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCc-ccHHHHHHHHhccchhhhh
Q psy3180 5 VDKIDKDKDGLIVDKIDKD-KDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEK-ITWDEYREKVYGFLDEVDA 82 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d-~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~-i~~~EF~~~~~~~~~~~~~ 82 (346)
++..+...|...|.++|++ ++|+++.+||..+.... .+--..+++..++.+++|. |++++|+..+..+......
T Consensus 27 fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~----~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~ 102 (187)
T KOG0034|consen 27 FSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELA----LNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASK 102 (187)
T ss_pred cCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHh----cCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccH
Confidence 4456778889999999999 99999999999887322 2335678999999999988 9999999998876654321
Q ss_pred hhhhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccch------hhhHHHHHHHHhhhccCCCCcccH
Q psy3180 83 AELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETA------HMRDLVVVETMEDIDKDKDGKVSL 156 (346)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~------~~~~~~~~~~~~~~d~~~dg~i~~ 156 (346)
..+++=+|+.+|.+++|+|+.+|+..++..+... ......+..++..+|.++||.|++
T Consensus 103 ----------------~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~Isf 166 (187)
T KOG0034|consen 103 ----------------REKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISF 166 (187)
T ss_pred ----------------HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcH
Confidence 2567889999999999999999999999865542 333455788888999999999999
Q ss_pred HHHHHHHHhh
Q psy3180 157 REYIEVDAAE 166 (346)
Q Consensus 157 ~eF~~~~~~~ 166 (346)
+||..++...
T Consensus 167 eEf~~~v~~~ 176 (187)
T KOG0034|consen 167 EEFCKVVEKQ 176 (187)
T ss_pred HHHHHHHHcC
Confidence 9999988653
No 26
>KOG0036|consensus
Probab=99.51 E-value=1e-13 Score=120.83 Aligned_cols=138 Identities=14% Similarity=0.201 Sum_probs=122.3
Q ss_pred chhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcc-cccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhh
Q psy3180 6 DKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKR-YIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAE 84 (346)
Q Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~-~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~ 84 (346)
.++...+.+.+|..||.+++|+|+..++.+.+..+..+ ...+-.+.+++..|+|.||.|+|+||...+.+.
T Consensus 9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~-------- 80 (463)
T KOG0036|consen 9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK-------- 80 (463)
T ss_pred cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHh--------
Confidence 34555678999999999999999999999999999888 444456789999999999999999998876542
Q ss_pred hhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHH
Q psy3180 85 LAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDA 164 (346)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 164 (346)
..++.+.|..+|.+.||.|...|+...|+..+. .++...++.+++.+|+++++.|+++||-.++.
T Consensus 81 --------------E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi-~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~l 145 (463)
T KOG0036|consen 81 --------------ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGI-QLSDEKAAKFFEHMDKDGKATIDLEEWRDHLL 145 (463)
T ss_pred --------------HHHHHHHHhhhccccCCccCHHHHHHHHHHhCC-ccCHHHHHHHHHHhccCCCeeeccHHHHhhhh
Confidence 456889999999999999999999999998866 79999999999999999999999999999875
Q ss_pred hh
Q psy3180 165 AE 166 (346)
Q Consensus 165 ~~ 166 (346)
..
T Consensus 146 l~ 147 (463)
T KOG0036|consen 146 LY 147 (463)
T ss_pred cC
Confidence 54
No 27
>KOG0044|consensus
Probab=99.46 E-value=4.2e-13 Score=108.39 Aligned_cols=133 Identities=21% Similarity=0.282 Sum_probs=103.8
Q ss_pred HHHHHHhcC-CCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchhHHH
Q psy3180 185 KRRWDVADI-DGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKN 263 (346)
Q Consensus 185 ~~~F~~~D~-~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~~~~ 263 (346)
...|+-|-. -++|.++.++|+.++.......-+..-+..+++.+|.+++|.|++.||+..+...... .. -+.
T Consensus 29 ~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rG----t~---eek 101 (193)
T KOG0044|consen 29 QQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRG----TL---EEK 101 (193)
T ss_pred HHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCC----cH---HHH
Confidence 444554433 3689999999999998875333445567889999999999999999999988765552 11 235
Q ss_pred HHHHhhhhhcCCCCCCCCHHHHHhhcCCC----CC-------CCcHHHHHHHHhhhccCCCCCcCHHHHHHHH
Q psy3180 264 EKEQFAMYRDKNGDGFMDEEEVKNWILPP----DF-------DHSDAEARHLIYESDSDADQKLTKDEILAKY 325 (346)
Q Consensus 264 ~~~~F~~~~D~d~~G~Is~~E~~~~l~~~----~~-------~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~ 325 (346)
++-+|+.| |.||+|+||.+|+-.++..+ +. ....+.+..+|+.+|.|+||.||++||+...
T Consensus 102 l~w~F~ly-D~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~ 173 (193)
T KOG0044|consen 102 LKWAFRLY-DLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGC 173 (193)
T ss_pred hhhhheee-cCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHh
Confidence 66679999 99999999999998888554 21 1234568999999999999999999999843
No 28
>KOG0751|consensus
Probab=99.45 E-value=3.3e-12 Score=113.56 Aligned_cols=275 Identities=10% Similarity=0.071 Sum_probs=195.3
Q ss_pred cchhchhhhhhhhHh---hccCCCCccCHHHHHHHHHHh-hcccccchHHHh-hhhcCCCCCCcccHHHHHHHHhccchh
Q psy3180 5 VDKIDKDKDGLIVDK---IDKDKDGFVSKEELKEWIQFT-QKRYIHNDVESQ-WRTHNPEDKEKITWDEYREKVYGFLDE 79 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~---~D~d~~G~is~~E~~~~l~~~-~~~~~~~~~~~~-~~~~D~~~dg~i~~~EF~~~~~~~~~~ 79 (346)
.+.-+++.|+.+|-. .+.+|.-+.+.++|.+....+ +..-.+..+..+ -...|..+||.|+|+||+.+=.-....
T Consensus 27 lkra~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC~p 106 (694)
T KOG0751|consen 27 LKRADPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLCAP 106 (694)
T ss_pred hccCChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhccCc
Confidence 455677888888876 589999999999998655443 333334444444 445678899999999999863322221
Q ss_pred hhhhhhhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchh-----hhHHHHHHHHhhhccCCCCcc
Q psy3180 80 VDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAH-----MRDLVVVETMEDIDKDKDGKV 154 (346)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~-----~~~~~~~~~~~~~d~~~dg~i 154 (346)
-.....+|..||+.++|.+|.++++.++....... .+...+.. .|..+....+
T Consensus 107 -------------------Dal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~---~Fg~~~~r~~ 164 (694)
T KOG0751|consen 107 -------------------DALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKL---HFGDIRKRHL 164 (694)
T ss_pred -------------------hHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHH---HhhhHHHHhc
Confidence 23457899999999999999999999987432211 11222222 4555666779
Q ss_pred cHHHHHHHHHhhhhhcccccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCC
Q psy3180 155 SLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDG 234 (346)
Q Consensus 155 ~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg 234 (346)
+|.+|..++...... +.+++|+..|+.++|.||.-+++.++-+....-+++..-..+......+...
T Consensus 165 ny~~f~Q~lh~~~~E-------------~~~qafr~~d~~~ng~is~Ldfq~imvt~~~h~lt~~v~~nlv~vagg~~~H 231 (694)
T KOG0751|consen 165 NYAEFTQFLHEFQLE-------------HAEQAFREKDKAKNGFISVLDFQDIMVTIRIHLLTPFVEENLVSVAGGNDSH 231 (694)
T ss_pred cHHHHHHHHHHHHHH-------------HHHHHHHHhcccCCCeeeeechHhhhhhhhhhcCCHHHhhhhhhhcCCCCcc
Confidence 999999999776554 2378999999999999999999999987654444554444444445555556
Q ss_pred cccHHHHHHHhhcCCCCCCCCCCchhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccC-CC
Q psy3180 235 KVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSD-AD 313 (346)
Q Consensus 235 ~i~~~eF~~~l~~~~~~~~~~~~~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~-~d 313 (346)
++++..|..+-..... ++.+++.+..+.+..++-.++.+++..+-..++ ..++-+++.+|...+.. ..
T Consensus 232 ~vSf~yf~afnslL~~----------melirk~y~s~~~~~~d~~~~kdq~~~~a~~~~-q~t~~~idilf~la~~~~~~ 300 (694)
T KOG0751|consen 232 QVSFSYFNAFNSLLNN----------MELIRKIYSSLAGTRKDVEVTKDQFSLAAQTSK-QVTPLEIDILFQLADLYHPM 300 (694)
T ss_pred ccchHHHHHHHHHHhh----------HHHHHHHHHHhcccccchhhhHHHHHHHHHHhh-ccCchhhhhhhhhhhccccc
Confidence 7888888764333333 456788888776777888999999988877665 55666789999988764 67
Q ss_pred CCcCHHHHHHHH
Q psy3180 314 QKLTKDEILAKY 325 (346)
Q Consensus 314 G~i~~~eF~~~~ 325 (346)
|+|++.++.+--
T Consensus 301 ~~ltl~Di~~I~ 312 (694)
T KOG0751|consen 301 GRLTLADIERIA 312 (694)
T ss_pred ccccHHHHHhhC
Confidence 789999987643
No 29
>KOG2562|consensus
Probab=99.44 E-value=7.5e-13 Score=117.16 Aligned_cols=265 Identities=12% Similarity=0.169 Sum_probs=179.0
Q ss_pred hhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhhhhccccchH
Q psy3180 14 GLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAELAKDEDQGF 93 (346)
Q Consensus 14 ~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~ 93 (346)
..+|..++.|..|+|+...|.+.-..... .....+.+++..++..+.|.+.-.+|...+......-.-......++...
T Consensus 142 ~~~f~k~~~d~~g~it~~~Fi~~~~~~~~-l~~t~~~~~v~~l~~~~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~~ 220 (493)
T KOG2562|consen 142 ASTFRKIDGDDTGHITRDKFINYWMRGLM-LTHTRLEQFVNLLIQAGCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQE 220 (493)
T ss_pred hhhhhhhccCcCCceeHHHHHHHHHhhhh-HHHHHHHHHHHHHhccCccceeccccHHHHHHHHhcCCchhhccChhHHH
Confidence 46789999999999999999876554332 34567888999999999999888888776654333211000101111122
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCC-CcccHHHHHHHHHhhhhhccc
Q psy3180 94 SYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKD-GKVSLREYIEVDAAELAKDED 172 (346)
Q Consensus 94 ~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~d-g~i~~~eF~~~~~~~~~~~~~ 172 (346)
.|. .--+.++|-.+++.++|.|+..++....-......+.++ -|.+.- ..-||+.|...
T Consensus 221 ~Y~--~tvi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eE--------ed~nq~~~~FS~e~f~vi---------- 280 (493)
T KOG2562|consen 221 RYA--ETVIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEE--------EDINQVTRYFSYEHFYVI---------- 280 (493)
T ss_pred HHH--HHHhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHH--------hhhhhhhhheeHHHHHHH----------
Confidence 222 234688999999999999999998654331111111111 132221 22334433332
Q ss_pred ccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHh----hhCCCCCCcccHHHHHHHhhcC
Q psy3180 173 QGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETME----DIDKDKDGKVSLREYIGDMFRG 248 (346)
Q Consensus 173 ~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~----~~d~~~dg~i~~~eF~~~l~~~ 248 (346)
...|..+|++++|.|+.++++..-... ++...++++|. ..-...+|+++|++|+.++...
T Consensus 281 ------------y~kFweLD~Dhd~lidk~~L~ry~d~t----lt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~ 344 (493)
T KOG2562|consen 281 ------------YCKFWELDTDHDGLIDKEDLKRYGDHT----LTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAE 344 (493)
T ss_pred ------------HHHHhhhccccccccCHHHHHHHhccc----hhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHh
Confidence 346888999999999999999887664 34556677777 3445688999999999999887
Q ss_pred CCCCCCCCCchhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCC-------C-CCCc-HHHHHHHHhhhccCCCCCcCHH
Q psy3180 249 GDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPP-------D-FDHS-DAEARHLIYESDSDADQKLTKD 319 (346)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~-------~-~~~~-~~~~~~l~~~~D~~~dG~i~~~ 319 (346)
....+..+ +...|+.+ |.+|+|.|+..|++-..... + ..++ ++.+++++..+-.-..|+|+..
T Consensus 345 e~k~t~~S-------leYwFrcl-Dld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItLq 416 (493)
T KOG2562|consen 345 EDKDTPAS-------LEYWFRCL-DLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPEDENKITLQ 416 (493)
T ss_pred ccCCCccc-------hhhheeee-eccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeHH
Confidence 77433333 55569997 99999999999998665332 3 2233 3445777777776778999999
Q ss_pred HHHH
Q psy3180 320 EILA 323 (346)
Q Consensus 320 eF~~ 323 (346)
+|+.
T Consensus 417 Dlk~ 420 (493)
T KOG2562|consen 417 DLKG 420 (493)
T ss_pred HHhh
Confidence 9987
No 30
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.31 E-value=3e-12 Score=86.65 Aligned_cols=62 Identities=24% Similarity=0.462 Sum_probs=54.4
Q ss_pred hhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccc----hHHHhhhhcCCCCCCcccHHHHHHHH
Q psy3180 12 KDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHN----DVESQWRTHNPEDKEKITWDEYREKV 73 (346)
Q Consensus 12 ~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~----~~~~~~~~~D~~~dg~i~~~EF~~~~ 73 (346)
+|+.+|..+|.|++|+|+..||..++..++...+.. .+..+|+.+|.|+||.|+|+||+.++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 478999999999999999999999999998665444 45666999999999999999998864
No 31
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.26 E-value=1.2e-11 Score=87.71 Aligned_cols=70 Identities=10% Similarity=0.133 Sum_probs=63.3
Q ss_pred hhchhhhhhhhHhhcc-CCCCccCHHHHHHHHHH-hhccccc-chHHHhhhhcCCCCCCcccHHHHHHHHhcc
Q psy3180 7 KIDKDKDGLIVDKIDK-DKDGFVSKEELKEWIQF-TQKRYIH-NDVESQWRTHNPEDKEKITWDEYREKVYGF 76 (346)
Q Consensus 7 ~~~~~~l~~~F~~~D~-d~~G~is~~E~~~~l~~-~~~~~~~-~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~ 76 (346)
+.....|+.+|+.||+ +++|+|+..||+.+|.. ++..++. .++..+++.+|.|+||.|+|+||..++...
T Consensus 4 E~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 4 EKAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3456789999999999 99999999999999999 8877888 899999999999999999999999887653
No 32
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.24 E-value=1.3e-11 Score=87.64 Aligned_cols=67 Identities=13% Similarity=0.109 Sum_probs=61.1
Q ss_pred hHHHHHHHhhhhhcC-CCCCCCCHHHHHhhcCC-CCCCCcH-HHHHHHHhhhccCCCCCcCHHHHHHHHhh
Q psy3180 260 WVKNEKEQFAMYRDK-NGDGFMDEEEVKNWILP-PDFDHSD-AEARHLIYESDSDADQKLTKDEILAKYDL 327 (346)
Q Consensus 260 ~~~~~~~~F~~~~D~-d~~G~Is~~E~~~~l~~-~~~~~~~-~~~~~l~~~~D~~~dG~i~~~eF~~~~~~ 327 (346)
.+..+..+|+.| |. +++|+|+..||+.+|.. +|..++. ++++.+++.+|.|+||+|+|+||+..+..
T Consensus 6 ai~~l~~~F~~f-d~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 6 AIETLVSNFHKA-SVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHHH-hCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 356899999999 99 99999999999999999 8887888 89999999999999999999999985443
No 33
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.24 E-value=6.8e-12 Score=84.85 Aligned_cols=62 Identities=32% Similarity=0.505 Sum_probs=54.4
Q ss_pred HHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcH----HHHHHHHhhhccCCCCCcCHHHHHHHH
Q psy3180 263 NEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSD----AEARHLIYESDSDADQKLTKDEILAKY 325 (346)
Q Consensus 263 ~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~----~~~~~l~~~~D~~~dG~i~~~eF~~~~ 325 (346)
.++.+|..+ |.|++|+|+.+||+.++..++...++ +.+..+|+.+|+|+||.|+|+||+.++
T Consensus 1 ~l~~~F~~~-D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKF-DKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHH-STTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHH-cCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 368899998 99999999999999999999866544 445666999999999999999999864
No 34
>KOG0751|consensus
Probab=99.21 E-value=9.8e-11 Score=104.35 Aligned_cols=215 Identities=13% Similarity=0.151 Sum_probs=155.6
Q ss_pred HHHHhccCCCCCCCHHHHHhhc-CCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhcccccchHHHHHHH
Q psy3180 105 RWDVADIDGDRALTREEFASFL-HPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNR 183 (346)
Q Consensus 105 ~F~~~D~~~~g~i~~~ef~~~l-~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~ 183 (346)
-|...+.++..+.+.++|.... .....+...+..+.-+-...|.-+||.|+|+||+.+-..++.+ ...+
T Consensus 41 ~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC~p----Dal~------ 110 (694)
T KOG0751|consen 41 KYASIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLCAP----DALF------ 110 (694)
T ss_pred HHhHHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhccCc----hHHH------
Confidence 3455678999999999986643 3333334455666666667888999999999999998888887 2222
Q ss_pred HHHHHHHhcCCCCCCcCHHHHHhhcCcCcc--ccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchhH
Q psy3180 184 DKRRWDVADIDGDRALTREEFASFLHPEET--AHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWV 261 (346)
Q Consensus 184 ~~~~F~~~D~~~~G~is~~e~~~~l~~~~~--~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~~ 261 (346)
..+|..||+.++|.+|.+++..++..... ..+-.+.-+.+-..+..+....++|.+|.+.+.....
T Consensus 111 -~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~----------- 178 (694)
T KOG0751|consen 111 -EVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQL----------- 178 (694)
T ss_pred -HHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHH-----------
Confidence 78999999999999999999999986431 1111112222333555666778999999998877554
Q ss_pred HHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCC-cHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh--------hccc
Q psy3180 262 KNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDH-SDAEARHLIYESDSDADQKLTKDEILAKYDLF--------VGSQ 332 (346)
Q Consensus 262 ~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~-~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~--------~~~~ 332 (346)
++-..+|+.. |+.++|.||.-+|+..+.....++ ++..-..+......+....+|+..|..+-.++ +++.
T Consensus 179 E~~~qafr~~-d~~~ng~is~Ldfq~imvt~~~h~lt~~v~~nlv~vagg~~~H~vSf~yf~afnslL~~melirk~y~s 257 (694)
T KOG0751|consen 179 EHAEQAFREK-DKAKNGFISVLDFQDIMVTIRIHLLTPFVEENLVSVAGGNDSHQVSFSYFNAFNSLLNNMELIRKIYSS 257 (694)
T ss_pred HHHHHHHHHh-cccCCCeeeeechHhhhhhhhhhcCCHHHhhhhhhhcCCCCccccchHHHHHHHHHHhhHHHHHHHHHH
Confidence 5778899998 999999999999999998876554 44433445555556667789999888766653 5566
Q ss_pred ccchhhhhcc
Q psy3180 333 ATDFGEALVR 342 (346)
Q Consensus 333 ~~~~~~~~~~ 342 (346)
+++..+++++
T Consensus 258 ~~~~~~d~~~ 267 (694)
T KOG0751|consen 258 LAGTRKDVEV 267 (694)
T ss_pred hcccccchhh
Confidence 6666666665
No 35
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.16 E-value=4.9e-11 Score=84.84 Aligned_cols=72 Identities=22% Similarity=0.267 Sum_probs=63.2
Q ss_pred HHHHHHHhhhhhc-CCCCC-CCCHHHHHhhcCC-----CCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhhcccc
Q psy3180 261 VKNEKEQFAMYRD-KNGDG-FMDEEEVKNWILP-----PDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFVGSQA 333 (346)
Q Consensus 261 ~~~~~~~F~~~~D-~d~~G-~Is~~E~~~~l~~-----~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~~~~~ 333 (346)
+..++.+|..| | .+|+| .|+.+||+.+|+. +|...++++++.+++.+|.|++|+|+|+||+. ++...+
T Consensus 7 ~~~l~~aF~~f-D~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~----li~~~~ 81 (88)
T cd05027 7 MVALIDVFHQY-SGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMA----FVAMVT 81 (88)
T ss_pred HHHHHHHHHHh-cccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHH----HHHHHH
Confidence 56889999999 9 79999 5999999999998 88889999999999999999999999999998 555555
Q ss_pred cchh
Q psy3180 334 TDFG 337 (346)
Q Consensus 334 ~~~~ 337 (346)
++..
T Consensus 82 ~~~~ 85 (88)
T cd05027 82 TACH 85 (88)
T ss_pred HHHh
Confidence 4443
No 36
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.12 E-value=1.2e-10 Score=82.81 Aligned_cols=69 Identities=16% Similarity=0.099 Sum_probs=61.7
Q ss_pred hchhhhhhhhHhhc-cCCCC-ccCHHHHHHHHHH-----hhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhcc
Q psy3180 8 IDKDKDGLIVDKID-KDKDG-FVSKEELKEWIQF-----TQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGF 76 (346)
Q Consensus 8 ~~~~~l~~~F~~~D-~d~~G-~is~~E~~~~l~~-----~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~ 76 (346)
.....++.+|+.+| +||+| .|+..||+.+|+. ++...++.++..+++.+|.|++|.|+|+||+..+...
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 34567899999998 89999 5999999999998 7887788889999999999999999999999887653
No 37
>KOG0377|consensus
Probab=99.11 E-value=4.7e-10 Score=98.78 Aligned_cols=144 Identities=16% Similarity=0.137 Sum_probs=106.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchh
Q psy3180 181 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDW 260 (346)
Q Consensus 181 ~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~ 260 (346)
...+...|+.+|..++|.|+......++.......++=..+. -+.+..+.+|.|.|.+.++.+....-.. +...+.
T Consensus 463 ~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~--~kla~~s~d~~v~Y~~~~~~l~~e~~~~--ea~~sl 538 (631)
T KOG0377|consen 463 RSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLR--PKLANGSDDGKVEYKSTLDNLDTEVILE--EAGSSL 538 (631)
T ss_pred hhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhh--hhccCCCcCcceehHhHHHHhhhhhHHH--HHHhHH
Confidence 345678999999999999999999998876433233211111 1224456788999999888665422210 111111
Q ss_pred H-------HHHHHHhhhhhcCCCCCCCCHHHHHhhcCCC----CCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhh
Q psy3180 261 V-------KNEKEQFAMYRDKNGDGFMDEEEVKNWILPP----DFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFV 329 (346)
Q Consensus 261 ~-------~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~----~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~ 329 (346)
+ ..+..+|..+ |.|++|.||.+||+..++-+ ...++.+++.++-..+|.|+||.|++.||+++|.+.-
T Consensus 539 vetLYr~ks~LetiF~~i-D~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlvd 617 (631)
T KOG0377|consen 539 VETLYRNKSSLETIFNII-DADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLVD 617 (631)
T ss_pred HHHHHhchhhHHHHHHHh-ccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhhc
Confidence 1 2466789997 99999999999999998655 4678899999999999999999999999999998753
No 38
>KOG0377|consensus
Probab=99.07 E-value=1e-09 Score=96.71 Aligned_cols=154 Identities=14% Similarity=0.173 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhccc--
Q psy3180 95 YKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDED-- 172 (346)
Q Consensus 95 ~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~-- 172 (346)
+.....++.+.|..+|..+.|+|+...+..++....+.+++-..+.. +....+.+|.|.|.+.+..+.........
T Consensus 459 l~s~~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~--kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~ 536 (631)
T KOG0377|consen 459 LRSHRSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRP--KLANGSDDGKVEYKSTLDNLDTEVILEEAGS 536 (631)
T ss_pred HHhhhhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhh--hccCCCcCcceehHhHHHHhhhhhHHHHHHh
Confidence 34445678889999999999999999999999977665666554443 23455677899999988776543333110
Q ss_pred -ccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCc---cccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcC
Q psy3180 173 -QGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEE---TAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRG 248 (346)
Q Consensus 173 -~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~---~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~ 248 (346)
.-++.=+....+..+|+.+|.|++|.||.+||..+..-++ ...+++.++..+.+.+|.|+||.|++.||+.+++..
T Consensus 537 slvetLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 537 SLVETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HHHHHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 0111112234568899999999999999999998776432 457889999999999999999999999999877654
Q ss_pred CC
Q psy3180 249 GD 250 (346)
Q Consensus 249 ~~ 250 (346)
..
T Consensus 617 dr 618 (631)
T KOG0377|consen 617 DR 618 (631)
T ss_pred cc
Confidence 43
No 39
>KOG4251|consensus
Probab=99.04 E-value=2.8e-09 Score=86.97 Aligned_cols=201 Identities=28% Similarity=0.424 Sum_probs=132.3
Q ss_pred chhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhhhhcc
Q psy3180 9 DKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAELAKD 88 (346)
Q Consensus 9 ~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~~~~ 88 (346)
..+.-+..|...|+||+|+|+.+||+.-+...... +..++..-+ -.|..-+|+-+
T Consensus 138 ameeSkthFraVDpdgDGhvsWdEykvkFlaskgh-sekevadai---rlneelkVDeE--------------------- 192 (362)
T KOG4251|consen 138 AMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGH-SEKEVADAI---RLNEELKVDEE--------------------- 192 (362)
T ss_pred HHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCc-chHHHHHHh---hccCcccccHH---------------------
Confidence 34445567888999999999999999544443221 222321111 11111111111
Q ss_pred ccchHHHHHHHHHHHHHHHHhccC-CCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhh
Q psy3180 89 EDQGFSYKNMLNRDKRRWDVADID-GDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAEL 167 (346)
Q Consensus 89 ~~~~~~~~~~~~~l~~~F~~~D~~-~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 167 (346)
-+.....++..+...|.. .+=.++..||..+|.+....++-...+..++..+|.|+|..+|-.+|+.......
T Consensus 193 ------tqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvGTV 266 (362)
T KOG4251|consen 193 ------TQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTV 266 (362)
T ss_pred ------HHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCcch
Confidence 011123334444445542 3455677999999998877778889999999999999999999999997653322
Q ss_pred hhcccccchHH-HHHHHHHHHH-HHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHH
Q psy3180 168 AKDEDQGFSYK-NMLNRDKRRW-DVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIG 243 (346)
Q Consensus 168 ~~~~~~~~~~~-~~~~~~~~~F-~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~ 243 (346)
... .-..+. .+...-++-| ..+|.|++|.+|.+|+..+..+.. ......++..++...|.+++.+++.++.+.
T Consensus 267 enq--qgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n-~~~alne~~~~ma~~d~n~~~~Ls~eell~ 341 (362)
T KOG4251|consen 267 ENQ--QGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQN-FRLALNEVNDIMALTDANNDEKLSLEELLE 341 (362)
T ss_pred hhh--hccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchh-hhhhHHHHHHHHhhhccCCCcccCHHHHHH
Confidence 110 111111 1222224445 578999999999999999988874 345667788899999999999999999876
No 40
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=99.01 E-value=7.5e-10 Score=79.90 Aligned_cols=69 Identities=20% Similarity=0.160 Sum_probs=58.1
Q ss_pred hchhhhhhhhHhhc-cCCCC-ccCHHHHHHHHHHh-----hcccccchHHHhhhhcCCCCCCcccHHHHHHHHhcc
Q psy3180 8 IDKDKDGLIVDKID-KDKDG-FVSKEELKEWIQFT-----QKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGF 76 (346)
Q Consensus 8 ~~~~~l~~~F~~~D-~d~~G-~is~~E~~~~l~~~-----~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~ 76 (346)
.....+..+|+.+| .||+| +||..||+.++... ....++.++..+++.+|.|+||.|+|+||+.++...
T Consensus 7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 45567889999999 78999 59999999999763 333456689999999999999999999999987654
No 41
>PLN02964 phosphatidylserine decarboxylase
Probab=98.99 E-value=1.2e-09 Score=103.93 Aligned_cols=102 Identities=15% Similarity=0.253 Sum_probs=85.0
Q ss_pred chhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhh-cccccch---HHHhhhhcCCCCCCcccHHHHHHHHhccchhhh
Q psy3180 6 DKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQ-KRYIHND---VESQWRTHNPEDKEKITWDEYREKVYGFLDEVD 81 (346)
Q Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~-~~~~~~~---~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~ 81 (346)
...+.+.++++|..+|+|++|.+ +..++..++ ..++..+ ++.+|+.+|.+++|.|+++||+.++.......
T Consensus 138 ~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~- 212 (644)
T PLN02964 138 VTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLV- 212 (644)
T ss_pred cHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCC-
Confidence 44566889999999999999997 778888888 4666665 78999999999999999999999887432111
Q ss_pred hhhhhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCC
Q psy3180 82 AAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHP 128 (346)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~ 128 (346)
...+++.+|..+|.+++|+|+.+||..++..
T Consensus 213 ----------------seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 213 ----------------AANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred ----------------CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 1345899999999999999999999998875
No 42
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.99 E-value=1.4e-09 Score=77.32 Aligned_cols=65 Identities=22% Similarity=0.271 Sum_probs=58.3
Q ss_pred HHHHHHHhhhhhcC-CC-CCCCCHHHHHhhcC---CCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHh
Q psy3180 261 VKNEKEQFAMYRDK-NG-DGFMDEEEVKNWIL---PPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYD 326 (346)
Q Consensus 261 ~~~~~~~F~~~~D~-d~-~G~Is~~E~~~~l~---~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~ 326 (346)
+..+-.+|..| |. +| +|+|+.+||+++|. .+|..++++++..+++.+|.|++|+|+|+||+....
T Consensus 9 ~~~~i~~F~~y-~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~ 78 (88)
T cd05029 9 IGLLVAIFHKY-SGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHH-HccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHH
Confidence 45788899999 87 77 89999999999996 468889999999999999999999999999997443
No 43
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.97 E-value=1.6e-09 Score=78.26 Aligned_cols=68 Identities=16% Similarity=0.231 Sum_probs=57.4
Q ss_pred hHHHHHHHhhhhhc-CCCCC-CCCHHHHHhhcCC-C----CCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh
Q psy3180 260 WVKNEKEQFAMYRD-KNGDG-FMDEEEVKNWILP-P----DFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLF 328 (346)
Q Consensus 260 ~~~~~~~~F~~~~D-~d~~G-~Is~~E~~~~l~~-~----~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~ 328 (346)
.+..++.+|..| | .||+| +||..||+.++.. + +...++.++..+++.+|.|++|.|+|+||+..+..+
T Consensus 8 a~~~~~~~F~~~-dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 8 AMDTLIRIFHNY-SGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHH-HccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 356788999999 7 88999 5999999999965 2 334577899999999999999999999999965543
No 44
>PLN02964 phosphatidylserine decarboxylase
Probab=98.96 E-value=4.5e-09 Score=100.14 Aligned_cols=113 Identities=17% Similarity=0.211 Sum_probs=88.6
Q ss_pred HHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHH---HHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCC
Q psy3180 181 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLV---VVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEEL 257 (346)
Q Consensus 181 ~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~---~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~ 257 (346)
...++.+|..+|++++|.+ +..++..++...+++.+ +..+++.+|.+++|.|+++||+..+..... ..
T Consensus 142 i~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~-----~~ 212 (644)
T PLN02964 142 PESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN-----LV 212 (644)
T ss_pred HHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc-----CC
Confidence 3566889999999999997 77777777632455555 899999999999999999999998875322 11
Q ss_pred chhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCC-------------CCCCCcH-HHHHHHH
Q psy3180 258 PDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILP-------------PDFDHSD-AEARHLI 305 (346)
Q Consensus 258 ~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~-------------~~~~~~~-~~~~~l~ 305 (346)
+ .+.+..+|+.+ |.|++|+|+.+||+++|.. +|..++. +++..|.
T Consensus 213 s--eEEL~eaFk~f-DkDgdG~Is~dEL~~vL~~~~~~~~~~~~cp~cg~~l~~~~~~~~ii 271 (644)
T PLN02964 213 A--ANKKEELFKAA-DLNGDGVVTIDELAALLALQQEQEPIINNCPVCGEALGVSDKLNAMI 271 (644)
T ss_pred C--HHHHHHHHHHh-CCCCCCcCCHHHHHHHHHhcccCcchhhhchhhcCcccchhhHHHHH
Confidence 1 34799999998 9999999999999999988 5655655 4455444
No 45
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.96 E-value=1.3e-09 Score=77.49 Aligned_cols=68 Identities=18% Similarity=0.184 Sum_probs=60.4
Q ss_pred hchhhhhhhhHhhcc-CC-CCccCHHHHHHHHHH---hhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 8 IDKDKDGLIVDKIDK-DK-DGFVSKEELKEWIQF---TQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 8 ~~~~~l~~~F~~~D~-d~-~G~is~~E~~~~l~~---~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
.....+-.+|.++|. || +|+|+..||+.++.. ++...+..++..+++.+|.|++|.|+|+||+.++..
T Consensus 7 ~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 7 QAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 445677889999999 78 999999999999974 588889999999999999999999999999987654
No 46
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.95 E-value=1.6e-09 Score=78.66 Aligned_cols=67 Identities=16% Similarity=0.224 Sum_probs=58.9
Q ss_pred chhhhhhhhHhhcc-CC-CCccCHHHHHHHHHH-----hhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 9 DKDKDGLIVDKIDK-DK-DGFVSKEELKEWIQF-----TQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 9 ~~~~l~~~F~~~D~-d~-~G~is~~E~~~~l~~-----~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
....++.+|..||. || +|+|+..|++.+|.. ++..++..++..+++.+|.+++|.|+|+||+..+..
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45678999999997 98 799999999999986 455678889999999999999999999999987754
No 47
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.94 E-value=1.7e-09 Score=78.76 Aligned_cols=69 Identities=19% Similarity=0.261 Sum_probs=62.3
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
++..+.+.++.+|..+|.|++|.|+..|+..++...+ ++..++..++..+|.+++|.|+|+||+..+..
T Consensus 4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 3567788999999999999999999999999999865 57788999999999999999999999987754
No 48
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.94 E-value=6.8e-10 Score=71.66 Aligned_cols=51 Identities=25% Similarity=0.350 Sum_probs=47.8
Q ss_pred CCCCCCHHHHHhhcCCCCCC-CcHHHHHHHHhhhccCCCCCcCHHHHHHHHh
Q psy3180 276 GDGFMDEEEVKNWILPPDFD-HSDAEARHLIYESDSDADQKLTKDEILAKYD 326 (346)
Q Consensus 276 ~~G~Is~~E~~~~l~~~~~~-~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~ 326 (346)
.+|.|+.+||+.+|..+|.. ++++++..+|..+|.|++|.|+|+||+..+.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 47999999999999888999 9999999999999999999999999999764
No 49
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.93 E-value=2.2e-09 Score=72.65 Aligned_cols=61 Identities=23% Similarity=0.415 Sum_probs=55.2
Q ss_pred HHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh
Q psy3180 265 KEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLF 328 (346)
Q Consensus 265 ~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~ 328 (346)
+.+|..+ |.+++|.|+.+|++.++..+|. +.+++..++..+|.+++|.|+|.||+..+...
T Consensus 2 ~~~F~~~-D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSL-DPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHh-CCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 5689998 9999999999999999988874 88889999999999999999999999876543
No 50
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.92 E-value=2.2e-09 Score=77.85 Aligned_cols=65 Identities=14% Similarity=0.238 Sum_probs=57.7
Q ss_pred HHHHHHHhhhhhcC-CC-CCCCCHHHHHhhcCC-----CCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHh
Q psy3180 261 VKNEKEQFAMYRDK-NG-DGFMDEEEVKNWILP-----PDFDHSDAEARHLIYESDSDADQKLTKDEILAKYD 326 (346)
Q Consensus 261 ~~~~~~~F~~~~D~-d~-~G~Is~~E~~~~l~~-----~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~ 326 (346)
...+..+|..| |. +| +|.|+.+|++.+|.. +|..++.+++..+++.+|.|++|.|+|+||+..+.
T Consensus 7 ~~~l~~~F~~~-D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~ 78 (94)
T cd05031 7 MESLILTFHRY-AGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHHH-hccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 45789999999 97 97 699999999999976 46678999999999999999999999999997554
No 51
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.92 E-value=2.3e-09 Score=76.82 Aligned_cols=69 Identities=14% Similarity=0.122 Sum_probs=60.2
Q ss_pred hhchhhhhhhhHhhcc--CCCCccCHHHHHHHHHH-hhccc----ccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 7 KIDKDKDGLIVDKIDK--DKDGFVSKEELKEWIQF-TQKRY----IHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 7 ~~~~~~l~~~F~~~D~--d~~G~is~~E~~~~l~~-~~~~~----~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
+++.+.++.+|..+|+ |++|.|+..||..++.. ++..+ +..++..++..+|.+++|.|+|+||+..+..
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 4667789999999999 89999999999999976 44433 4778999999999999999999999998764
No 52
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.92 E-value=2.4e-09 Score=77.39 Aligned_cols=66 Identities=15% Similarity=0.275 Sum_probs=57.6
Q ss_pred HHHHHHHhhhhhc-CCCCCC-CCHHHHHhhcCC-CC----CCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhh
Q psy3180 261 VKNEKEQFAMYRD-KNGDGF-MDEEEVKNWILP-PD----FDHSDAEARHLIYESDSDADQKLTKDEILAKYDL 327 (346)
Q Consensus 261 ~~~~~~~F~~~~D-~d~~G~-Is~~E~~~~l~~-~~----~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~ 327 (346)
+..++.+|..| | .+++|+ |+..||+.+|.. +| ..++.+++..+++.+|.|++|.|+|+||+.....
T Consensus 8 ~~~l~~~F~~f-Dd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 8 METLINVFHAH-SGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHH-hcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 46799999998 9 999995 999999999975 44 3468889999999999999999999999985543
No 53
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.92 E-value=2.6e-09 Score=72.32 Aligned_cols=60 Identities=17% Similarity=0.315 Sum_probs=54.7
Q ss_pred hhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 14 GLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 14 ~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
+.+|..+|.|++|.|+..|+..++...+. +..++..++..+|.+++|.|+|+||+..+..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 67899999999999999999999998764 7788999999999999999999999987654
No 54
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.91 E-value=2.6e-09 Score=77.14 Aligned_cols=67 Identities=16% Similarity=0.225 Sum_probs=58.1
Q ss_pred chhhhhhhhHhhc-cCCCCc-cCHHHHHHHHHH-hhc----ccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 9 DKDKDGLIVDKID-KDKDGF-VSKEELKEWIQF-TQK----RYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 9 ~~~~l~~~F~~~D-~d~~G~-is~~E~~~~l~~-~~~----~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
..+.++.+|+.|| .+|+|+ |+..||+.+|.. ++. ..+..+++.+++.+|.+++|.|+|+||+..+..
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 4567999999997 999995 999999999985 543 346778999999999999999999999987664
No 55
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.89 E-value=4.6e-09 Score=74.80 Aligned_cols=67 Identities=16% Similarity=0.258 Sum_probs=57.3
Q ss_pred hHHHHHHHhhhhhcCCCCC-CCCHHHHHhhcCCC-----CCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHh
Q psy3180 260 WVKNEKEQFAMYRDKNGDG-FMDEEEVKNWILPP-----DFDHSDAEARHLIYESDSDADQKLTKDEILAKYD 326 (346)
Q Consensus 260 ~~~~~~~~F~~~~D~d~~G-~Is~~E~~~~l~~~-----~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~ 326 (346)
.+..+..+|..|.|.+|+| +||.+||+.++... +...++.++..+++.+|.|+||.|+|+||+....
T Consensus 7 ~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~ 79 (89)
T cd05023 7 CIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence 3568899999955899986 99999999999775 3456778999999999999999999999998443
No 56
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.89 E-value=4.1e-09 Score=75.10 Aligned_cols=69 Identities=13% Similarity=0.176 Sum_probs=58.9
Q ss_pred hhchhhhhhhhHh-hccCCCC-ccCHHHHHHHHHHh-----hcccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 7 KIDKDKDGLIVDK-IDKDKDG-FVSKEELKEWIQFT-----QKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 7 ~~~~~~l~~~F~~-~D~d~~G-~is~~E~~~~l~~~-----~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
+.....+..+|+. +|.+|+| .||..||+.++... +....+.++..+++.+|.|+||.|+|+||+.++..
T Consensus 5 e~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 5 ERCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 4456788999999 8899986 99999999999876 33445678999999999999999999999987665
No 57
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.88 E-value=4e-09 Score=78.74 Aligned_cols=64 Identities=19% Similarity=0.232 Sum_probs=55.4
Q ss_pred chhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHH
Q psy3180 6 DKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKV 73 (346)
Q Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~ 73 (346)
.++.+..+..+|..+|.|+||+||..|+..+. + .....-+..+|..+|.|+||.||++||...+
T Consensus 43 ~~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l--~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 43 YPMCKDPVGWMFNQLDGNYDGKLSHHELAPIR--L--DPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred hHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH--c--cchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 35677889999999999999999999999775 2 2234567889999999999999999999987
No 58
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.88 E-value=5.2e-09 Score=74.99 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=59.0
Q ss_pred hHHHHHHHhhhhhcC--CCCCCCCHHHHHhhcCC-CCCCC----cHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh
Q psy3180 260 WVKNEKEQFAMYRDK--NGDGFMDEEEVKNWILP-PDFDH----SDAEARHLIYESDSDADQKLTKDEILAKYDLF 328 (346)
Q Consensus 260 ~~~~~~~~F~~~~D~--d~~G~Is~~E~~~~l~~-~~~~~----~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~ 328 (346)
.++.++.+|..| |. +++|.|+.+||+.++.. +|..+ +..++..++..+|.+++|.|+|++|+..+...
T Consensus 6 ~~~~l~~~F~~~-D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 6 AIETIIDVFHKY-SGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHH-hhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 356789999999 99 89999999999999975 45443 58899999999999999999999999966554
No 59
>KOG0038|consensus
Probab=98.86 E-value=7.7e-09 Score=77.50 Aligned_cols=102 Identities=20% Similarity=0.313 Sum_probs=83.4
Q ss_pred HHHHhhhccCCCCcccHHHHHHHHHhhhhhcccccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHH
Q psy3180 140 VETMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDL 219 (346)
Q Consensus 140 ~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~ 219 (346)
+.+...|..++.|.+|++.|+..++..+...+. ..+..-+|+.||-|++++|...++...+..+....++++
T Consensus 74 ~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APr--------dlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~e 145 (189)
T KOG0038|consen 74 RRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPR--------DLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDE 145 (189)
T ss_pred HHHHHHhccCCCCcccHHHHHHHHHHHHhhChH--------HhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHH
Confidence 456678899999999999999999888766221 123366899999999999999999999988776678877
Q ss_pred H----HHHHHhhhCCCCCCcccHHHHHHHhhcCC
Q psy3180 220 V----VVETMEDIDKDKDGKVSLREYIGDMFRGG 249 (346)
Q Consensus 220 ~----~~~l~~~~d~~~dg~i~~~eF~~~l~~~~ 249 (346)
+ +++++..+|.++||++++.+|-..+....
T Consensus 146 Ev~~i~ekvieEAD~DgDgkl~~~eFe~~i~raP 179 (189)
T KOG0038|consen 146 EVELICEKVIEEADLDGDGKLSFAEFEHVILRAP 179 (189)
T ss_pred HHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhCc
Confidence 6 45667778999999999999998776543
No 60
>KOG0038|consensus
Probab=98.86 E-value=2.8e-09 Score=79.82 Aligned_cols=95 Identities=24% Similarity=0.350 Sum_probs=77.3
Q ss_pred HHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCC-CCCcHHH
Q psy3180 222 VETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPD-FDHSDAE 300 (346)
Q Consensus 222 ~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~-~~~~~~~ 300 (346)
+++...+..+|.|.++++.|+..+..... ..|. --++..||+.| |-|++++|...++.+.+..+. -.+++++
T Consensus 74 ~ri~e~FSeDG~GnlsfddFlDmfSV~sE-----~APr-dlK~~YAFkIY-Dfd~D~~i~~~DL~~~l~~lTr~eLs~eE 146 (189)
T KOG0038|consen 74 RRICEVFSEDGRGNLSFDDFLDMFSVFSE-----MAPR-DLKAKYAFKIY-DFDGDEFIGHDDLEKTLTSLTRDELSDEE 146 (189)
T ss_pred HHHHHHhccCCCCcccHHHHHHHHHHHHh-----hChH-HhhhhheeEEe-ecCCCCcccHHHHHHHHHHHhhccCCHHH
Confidence 45677889999999999999997765444 1222 13567899999 999999999999999998774 4577766
Q ss_pred ----HHHHHhhhccCCCCCcCHHHHHH
Q psy3180 301 ----ARHLIYESDSDADQKLTKDEILA 323 (346)
Q Consensus 301 ----~~~l~~~~D~~~dG~i~~~eF~~ 323 (346)
++.++...|.|+||+|++.||-.
T Consensus 147 v~~i~ekvieEAD~DgDgkl~~~eFe~ 173 (189)
T KOG0038|consen 147 VELICEKVIEEADLDGDGKLSFAEFEH 173 (189)
T ss_pred HHHHHHHHHHHhcCCCCCcccHHHHHH
Confidence 46788999999999999999975
No 61
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.83 E-value=4.6e-09 Score=67.73 Aligned_cols=51 Identities=20% Similarity=0.402 Sum_probs=48.0
Q ss_pred CCCccCHHHHHHHHHHhhcc-cccchHHHhhhhcCCCCCCcccHHHHHHHHh
Q psy3180 24 KDGFVSKEELKEWIQFTQKR-YIHNDVESQWRTHNPEDKEKITWDEYREKVY 74 (346)
Q Consensus 24 ~~G~is~~E~~~~l~~~~~~-~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 74 (346)
.+|.|+.+||+.+|..++.. +++.++..+|..+|.|++|.|+|+||+.++.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 47999999999999888998 9999999999999999999999999998864
No 62
>KOG2562|consensus
Probab=98.83 E-value=8.7e-08 Score=85.56 Aligned_cols=218 Identities=16% Similarity=0.239 Sum_probs=151.1
Q ss_pred hhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccc-------cc--------hHHHhhhhcCCCCCCcccHHHHHHHHh
Q psy3180 10 KDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYI-------HN--------DVESQWRTHNPEDKEKITWDEYREKVY 74 (346)
Q Consensus 10 ~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~-------~~--------~~~~~~~~~D~~~dg~i~~~EF~~~~~ 74 (346)
...+.++++.++..+.|++...+|+..|+.+....+ ++ -+.++|-.++..+.|+|+..|.+.--.
T Consensus 173 ~t~~~~~v~~l~~~~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~snl 252 (493)
T KOG2562|consen 173 HTRLEQFVNLLIQAGCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLRSNL 252 (493)
T ss_pred HHHHHHHHHHHhccCccceeccccHHHHHHHHhcCCchhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHHhHH
Confidence 455677899999999999999999999987644332 11 246788899999999999998875321
Q ss_pred c-cchhhhhhhhhccccchHHH--HHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhh----hc
Q psy3180 75 G-FLDEVDAAELAKDEDQGFSY--KNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMED----ID 147 (346)
Q Consensus 75 ~-~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~----~d 147 (346)
. .+......+ +..+...+ -.....+---|..+|.+.+|.|+.+++...-.. .++...+.++|.. +-
T Consensus 253 l~~l~~l~eEe---d~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~----tlt~~ivdRIFs~v~r~~~ 325 (493)
T KOG2562|consen 253 LDALLELDEEE---DINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDH----TLTERIVDRIFSQVPRGFT 325 (493)
T ss_pred HHHHHHHHHHh---hhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhcc----chhhHHHHHHHhhccccce
Confidence 1 111111000 00111111 112233344589999999999999999876653 3446677888883 44
Q ss_pred cCCCCcccHHHHHHHHHhhhhhcccccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCc-------CccccCc-HH
Q psy3180 148 KDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHP-------EETAHMR-DL 219 (346)
Q Consensus 148 ~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~-------~~~~~~~-~~ 219 (346)
.-.+|+++|++|+.++......+...+. .--|+++|.+++|.|+..|++.+... .+...++ +.
T Consensus 326 ~~~eGrmdykdFv~FilA~e~k~t~~Sl---------eYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed 396 (493)
T KOG2562|consen 326 VKVEGRMDYKDFVDFILAEEDKDTPASL---------EYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFED 396 (493)
T ss_pred eeecCcccHHHHHHHHHHhccCCCccch---------hhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHH
Confidence 4478999999999999888777544444 44899999999999999999877653 2222333 44
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHH
Q psy3180 220 VVVETMEDIDKDKDGKVSLREYIG 243 (346)
Q Consensus 220 ~~~~l~~~~d~~~dg~i~~~eF~~ 243 (346)
....++..+.+...++|+..+|..
T Consensus 397 ~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 397 ALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred HHHHHHHHhCccCCCceeHHHHhh
Confidence 566677777666778899999876
No 63
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.82 E-value=1.1e-08 Score=74.59 Aligned_cols=65 Identities=25% Similarity=0.292 Sum_probs=59.1
Q ss_pred HHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh
Q psy3180 261 VKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLF 328 (346)
Q Consensus 261 ~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~ 328 (346)
...++.+|..+ |.+++|.|+.+|++.+|...+ ++.+++..++..+|.+++|.|+|+||+..+...
T Consensus 9 ~~~l~~~F~~~-D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 9 KAKYEQIFRSL-DKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred HHHHHHHHHHh-CCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 46899999998 999999999999999998865 678899999999999999999999999876653
No 64
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.80 E-value=2e-08 Score=74.97 Aligned_cols=63 Identities=21% Similarity=0.209 Sum_probs=54.6
Q ss_pred chhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHH
Q psy3180 258 PDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKY 325 (346)
Q Consensus 258 ~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~ 325 (346)
+.+...+.-+|..+ |.|++|+||.+|+..+. .......+..++..+|.|+||.||++||...+
T Consensus 44 ~~~~~~l~w~F~~l-D~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 44 PMCKDPVGWMFNQL-DGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHHHHH-CCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 34556889999998 99999999999999886 33446678899999999999999999999966
No 65
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.80 E-value=1.3e-08 Score=67.43 Aligned_cols=61 Identities=23% Similarity=0.330 Sum_probs=57.1
Q ss_pred hhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHH
Q psy3180 13 DGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKV 73 (346)
Q Consensus 13 l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~ 73 (346)
+..+|..+|.+++|.|+..||..++..++.+.+...+..+|..+|.+++|.|+++||...+
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 6789999999999999999999999999988888889999999999999999999998754
No 66
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.76 E-value=1.8e-08 Score=66.62 Aligned_cols=61 Identities=31% Similarity=0.481 Sum_probs=57.0
Q ss_pred HHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHH
Q psy3180 264 EKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKY 325 (346)
Q Consensus 264 ~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~ 325 (346)
+..+|..+ |.+++|.|+.+|+..++..++...+.+.+..++..+|.+++|.|++++|+..+
T Consensus 2 ~~~~f~~~-d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLF-DKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHh-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 56789998 99999999999999999999999999999999999999999999999998754
No 67
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.57 E-value=2.6e-07 Score=65.89 Aligned_cols=72 Identities=15% Similarity=0.308 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHhccC--CCCCCCHHHHHhhcCCccchhhh----HHHHHHHHhhhccCCCCcccHHHHHHHHHhhh
Q psy3180 96 KNMLNRDKRRWDVADID--GDRALTREEFASFLHPEETAHMR----DLVVVETMEDIDKDKDGKVSLREYIEVDAAEL 167 (346)
Q Consensus 96 ~~~~~~l~~~F~~~D~~--~~g~i~~~ef~~~l~~~~~~~~~----~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 167 (346)
.+.+..+...|..++.. .+|+|+..||+.++.......++ +.++..++..+|.+++|.|+|+||+.++..+.
T Consensus 4 e~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~ 81 (88)
T cd05030 4 EKAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVG 81 (88)
T ss_pred HHHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 34577889999999976 48999999999999744333455 89999999999999999999999999887653
No 68
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.56 E-value=1.5e-07 Score=67.12 Aligned_cols=69 Identities=7% Similarity=0.126 Sum_probs=58.6
Q ss_pred hhchhhhhhhhHhhccC--CCCccCHHHHHHHHH-Hhhcccc----cchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 7 KIDKDKDGLIVDKIDKD--KDGFVSKEELKEWIQ-FTQKRYI----HNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 7 ~~~~~~l~~~F~~~D~d--~~G~is~~E~~~~l~-~~~~~~~----~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
+.....+..+|+.++.. ++|.|+..||+.+|. .++..++ ..++..+|+.+|.+++|.|+|+||+..+..
T Consensus 4 e~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 4 EKAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 34567788999999977 489999999999997 4555555 788999999999999999999999987664
No 69
>KOG0041|consensus
Probab=98.53 E-value=1.2e-07 Score=75.23 Aligned_cols=70 Identities=16% Similarity=0.249 Sum_probs=63.7
Q ss_pred chhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 6 DKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
+..+.+.+..+|+++|.+.||+|+..|++.+|.++|.+-+.--++.++..+|.|.||+|++.||+-.+..
T Consensus 94 srkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrk 163 (244)
T KOG0041|consen 94 SRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRK 163 (244)
T ss_pred HHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHH
Confidence 3456677889999999999999999999999999999988888999999999999999999999877654
No 70
>KOG0040|consensus
Probab=98.50 E-value=7.5e-07 Score=89.22 Aligned_cols=138 Identities=17% Similarity=0.254 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchh-h-----hHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhc
Q psy3180 97 NMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAH-M-----RDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKD 170 (346)
Q Consensus 97 ~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~-~-----~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~ 170 (346)
+.+....-+|..||++.+|.++..+|..||+..+..- + ++.++..++..+|++.+|.|+..+|.+||......+
T Consensus 2250 e~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeN 2329 (2399)
T KOG0040|consen 2250 EQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETEN 2329 (2399)
T ss_pred HHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhccccc
Confidence 4566777899999999999999999999999665422 2 334799999999999999999999999997655543
Q ss_pred ccccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCC----CCCcccHHHHHHHhh
Q psy3180 171 EDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKD----KDGKVSLREYIGDMF 246 (346)
Q Consensus 171 ~~~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~----~dg~i~~~eF~~~l~ 246 (346)
..... .+..+|+.+|. +..+|+..++...|.+- ..+..+.++-..+++. -.+.++|.+|+..+.
T Consensus 2330 I~s~~-------eIE~AfraL~a-~~~yvtke~~~~~ltre----qaefc~s~m~~~~e~~~~~s~q~~l~y~dfv~sl~ 2397 (2399)
T KOG0040|consen 2330 ILSSE-------EIEDAFRALDA-GKPYVTKEELYQNLTRE----QAEFCMSKMKPYAETSSGRSDQVALDYKDFVNSLF 2397 (2399)
T ss_pred ccchH-------HHHHHHHHhhc-CCccccHHHHHhcCCHH----HHHHHHHHhhhhcccccCCCccccccHHHHHHHHh
Confidence 33333 34889999999 77899999998766542 2233344444445542 335689999988765
No 71
>KOG0041|consensus
Probab=98.49 E-value=1.7e-07 Score=74.37 Aligned_cols=67 Identities=28% Similarity=0.423 Sum_probs=62.1
Q ss_pred HHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh
Q psy3180 261 VKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLF 328 (346)
Q Consensus 261 ~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~ 328 (346)
++.+..+|+.| |.+.||+|+..|++..|..+|.+.|---+..+++..|-|.||+|||-||+--|..-
T Consensus 98 Ik~~~~~Fk~y-De~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrka 164 (244)
T KOG0041|consen 98 IKDAESMFKQY-DEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKA 164 (244)
T ss_pred HHHHHHHHHHh-cccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHH
Confidence 45888999999 99999999999999999999998888788999999999999999999999887764
No 72
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.43 E-value=1.8e-07 Score=51.25 Aligned_cols=28 Identities=32% Similarity=0.329 Sum_probs=23.2
Q ss_pred hhhhhHhhccCCCCccCHHHHHHHHHHh
Q psy3180 13 DGLIVDKIDKDKDGFVSKEELKEWIQFT 40 (346)
Q Consensus 13 l~~~F~~~D~d~~G~is~~E~~~~l~~~ 40 (346)
++.+|+.+|+||||+||.+||..++..+
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 5788888999999999999988887653
No 73
>PF14658 EF-hand_9: EF-hand domain
Probab=98.38 E-value=4.8e-07 Score=59.25 Aligned_cols=63 Identities=17% Similarity=0.280 Sum_probs=58.3
Q ss_pred HHhhhhhcCCCCCCCCHHHHHhhcCCCCC-CCcHHHHHHHHhhhccCCC-CCcCHHHHHHHHhhhh
Q psy3180 266 EQFAMYRDKNGDGFMDEEEVKNWILPPDF-DHSDAEARHLIYESDSDAD-QKLTKDEILAKYDLFV 329 (346)
Q Consensus 266 ~~F~~~~D~d~~G~Is~~E~~~~l~~~~~-~~~~~~~~~l~~~~D~~~d-G~i~~~eF~~~~~~~~ 329 (346)
.+|..+ |.++.|.|....+..+|++++. .+++.+++.+.+.+|.++. |.|+++.|+..+..|+
T Consensus 2 ~~F~~f-D~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~wi 66 (66)
T PF14658_consen 2 TAFDAF-DTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRDWI 66 (66)
T ss_pred cchhhc-CCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHHhC
Confidence 468898 9999999999999999999998 8899999999999999988 9999999999887763
No 74
>PF14658 EF-hand_9: EF-hand domain
Probab=98.37 E-value=7.6e-07 Score=58.31 Aligned_cols=61 Identities=15% Similarity=0.287 Sum_probs=56.7
Q ss_pred hhhHhhccCCCCccCHHHHHHHHHHhhc-ccccchHHHhhhhcCCCCC-CcccHHHHHHHHhc
Q psy3180 15 LIVDKIDKDKDGFVSKEELKEWIQFTQK-RYIHNDVESQWRTHNPEDK-EKITWDEYREKVYG 75 (346)
Q Consensus 15 ~~F~~~D~d~~G~is~~E~~~~l~~~~~-~~~~~~~~~~~~~~D~~~d-g~i~~~EF~~~~~~ 75 (346)
.+|..||+++.|.|...++...|+..+. .+++.+++.+.+.+|+++. |.|+++.|+..+..
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 4799999999999999999999999999 7788899999999999998 99999999998764
No 75
>KOG0040|consensus
Probab=98.37 E-value=3.2e-06 Score=84.90 Aligned_cols=140 Identities=12% Similarity=0.166 Sum_probs=105.7
Q ss_pred ccchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccc-------cchHHHhhhhcCCCCCCcccHHHHHHHHhcc
Q psy3180 4 IVDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYI-------HNDVESQWRTHNPEDKEKITWDEYREKVYGF 76 (346)
Q Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~-------~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~ 76 (346)
.+++++...+.-+|+.||.+++|.++..+|+.+|+.+|..++ ...++.++..+|++.+|.|+..+|..++...
T Consensus 2246 GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ 2325 (2399)
T KOG0040|consen 2246 GVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK 2325 (2399)
T ss_pred CCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc
Confidence 467788889999999999999999999999999999887652 2368999999999999999999999998653
Q ss_pred chhhhhhhhhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccC----CCC
Q psy3180 77 LDEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKD----KDG 152 (346)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~----~dg 152 (346)
-++. + .....+..+|+.+|. +.-||+..++...|.+. ..+..+..+-..+++. -.+
T Consensus 2326 ETeN--------------I-~s~~eIE~AfraL~a-~~~yvtke~~~~~ltre----qaefc~s~m~~~~e~~~~~s~q~ 2385 (2399)
T KOG0040|consen 2326 ETEN--------------I-LSSEEIEDAFRALDA-GKPYVTKEELYQNLTRE----QAEFCMSKMKPYAETSSGRSDQV 2385 (2399)
T ss_pred cccc--------------c-cchHHHHHHHHHhhc-CCccccHHHHHhcCCHH----HHHHHHHHhhhhcccccCCCccc
Confidence 2210 0 113468999999999 88999999998777643 2223333333344543 234
Q ss_pred cccHHHHHHHH
Q psy3180 153 KVSLREYIEVD 163 (346)
Q Consensus 153 ~i~~~eF~~~~ 163 (346)
.+.|.+|+..+
T Consensus 2386 ~l~y~dfv~sl 2396 (2399)
T KOG0040|consen 2386 ALDYKDFVNSL 2396 (2399)
T ss_pred cccHHHHHHHH
Confidence 58888887654
No 76
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.20 E-value=8.6e-06 Score=57.43 Aligned_cols=71 Identities=18% Similarity=0.324 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccch----hhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhh
Q psy3180 97 NMLNRDKRRWDVADIDGDRALTREEFASFLHPEETA----HMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELA 168 (346)
Q Consensus 97 ~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~----~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~ 168 (346)
+.+..+..+|..+. .+.+.++..||+..+...... .-.+..+..+++..|.|+||.|+|.||+.++..+..
T Consensus 5 ~ai~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~ 79 (91)
T cd05024 5 HSMEKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLI 79 (91)
T ss_pred HHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 44677888999998 445799999999999743221 235788999999999999999999999998866543
No 77
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=98.17 E-value=1.5e-06 Score=48.71 Aligned_cols=30 Identities=30% Similarity=0.398 Sum_probs=25.6
Q ss_pred hhhhhhHhhccCCCCccCHHHHHHHHH-Hhh
Q psy3180 12 KDGLIVDKIDKDKDGFVSKEELKEWIQ-FTQ 41 (346)
Q Consensus 12 ~l~~~F~~~D~d~~G~is~~E~~~~l~-~~~ 41 (346)
+++.+|+.+|.|++|+|+..||..+|. .+|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 478899999999999999999999998 453
No 78
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.15 E-value=7.7e-06 Score=57.67 Aligned_cols=67 Identities=10% Similarity=0.234 Sum_probs=54.4
Q ss_pred chhhhhhhhHhhccCCCCccCHHHHHHHHHH-----hhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhcc
Q psy3180 9 DKDKDGLIVDKIDKDKDGFVSKEELKEWIQF-----TQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGF 76 (346)
Q Consensus 9 ~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~-----~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~ 76 (346)
....+..+|+.+-.+ .|.+++.||+..|.. +...-.+..+..+|+.+|.|+||.|+|.||+..+...
T Consensus 6 ai~~lI~~FhkYaG~-~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 6 SMEKMMLTFHKFAGE-KNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHHHcCC-CCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 455678899999844 679999999999975 2333345678999999999999999999999987654
No 79
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=98.09 E-value=3.2e-06 Score=52.04 Aligned_cols=49 Identities=27% Similarity=0.342 Sum_probs=41.0
Q ss_pred CCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh
Q psy3180 280 MDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLF 328 (346)
Q Consensus 280 Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~ 328 (346)
+|..|++.+|+.+.+.++++.+..+|+.+|.+++|+|.-+||..+|..+
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 6789999999999999999999999999999999999999999988753
No 80
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=98.05 E-value=3.3e-06 Score=44.45 Aligned_cols=25 Identities=28% Similarity=0.341 Sum_probs=19.7
Q ss_pred hhhhhHhhccCCCCccCHHHHHHHH
Q psy3180 13 DGLIVDKIDKDKDGFVSKEELKEWI 37 (346)
Q Consensus 13 l~~~F~~~D~d~~G~is~~E~~~~l 37 (346)
|+.+|+.+|.|+||.||..||.+++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4567888888888888888888753
No 81
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.02 E-value=7.2e-06 Score=44.85 Aligned_cols=26 Identities=35% Similarity=0.647 Sum_probs=16.4
Q ss_pred HHHHHhhhccCCCCcccHHHHHHHHH
Q psy3180 139 VVETMEDIDKDKDGKVSLREYIEVDA 164 (346)
Q Consensus 139 ~~~~~~~~d~~~dg~i~~~eF~~~~~ 164 (346)
+..+|+.+|+|++|.|+++||...+.
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMK 27 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 45566666666666666666666554
No 82
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.95 E-value=1.2e-05 Score=58.71 Aligned_cols=68 Identities=16% Similarity=0.330 Sum_probs=57.7
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
+.+++++++..+|...|. ++|+|+..+...++...+ ++...+.++|...|.++||.++.+||+-.+.-
T Consensus 4 ls~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~--L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 4 LSPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKSG--LPRDVLAQIWNLADIDNDGKLDFEEFAIAMHL 71 (104)
T ss_dssp -SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHTT--SSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHH
Confidence 356778899999999995 689999999999887765 56689999999999999999999999987654
No 83
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.81 E-value=2.7e-05 Score=56.93 Aligned_cols=65 Identities=17% Similarity=0.250 Sum_probs=56.2
Q ss_pred HHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhh
Q psy3180 261 VKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFV 329 (346)
Q Consensus 261 ~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~ 329 (346)
...+..+|... |. ++|.|+.++.+.++...+ ++.+.+.+||...|.|++|.++++||+-++.+..
T Consensus 9 ~~~y~~~F~~l-~~-~~g~isg~~a~~~f~~S~--L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~ 73 (104)
T PF12763_consen 9 KQKYDQIFQSL-DP-QDGKISGDQAREFFMKSG--LPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLIN 73 (104)
T ss_dssp HHHHHHHHHCT-SS-STTEEEHHHHHHHHHHTT--SSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHH
Confidence 35788899987 84 689999999999998775 6778899999999999999999999999988864
No 84
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.80 E-value=7.2e-06 Score=45.86 Aligned_cols=29 Identities=41% Similarity=0.759 Sum_probs=23.1
Q ss_pred HHHHhhhhhcCCCCCCCCHHHHHhhcC-CCC
Q psy3180 264 EKEQFAMYRDKNGDGFMDEEEVKNWIL-PPD 293 (346)
Q Consensus 264 ~~~~F~~~~D~d~~G~Is~~E~~~~l~-~~~ 293 (346)
++.+|..+ |.|++|+|+.+||+.+|+ .+|
T Consensus 2 l~~~F~~~-D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 2 LREAFKMF-DKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHH--TTSSSEEEHHHHHHHHHHHTT
T ss_pred HHHHHHHH-CCCCCCcCcHHHHHHHHHHhcC
Confidence 67888888 999999999999998887 454
No 85
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.80 E-value=3.3e-05 Score=70.26 Aligned_cols=54 Identities=24% Similarity=0.278 Sum_probs=47.2
Q ss_pred chhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 9 DKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 9 ~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
-+..++.+|+.+|.||||+|+..||.. ...+|..+|.|+||.|+++||...+..
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 356778999999999999999999942 577899999999999999999987654
No 86
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.77 E-value=0.00013 Score=66.53 Aligned_cols=52 Identities=31% Similarity=0.490 Sum_probs=46.0
Q ss_pred HHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhh
Q psy3180 262 KNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDL 327 (346)
Q Consensus 262 ~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~ 327 (346)
..+..+|+.+ |.+++|.|+.+||.. +..+|..+|.|+||+|+++||...+..
T Consensus 334 ~~l~~aF~~~-D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 334 HAAQEIFRLY-DLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred HHHHHHHHHh-CCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 4678899998 999999999999942 678999999999999999999986543
No 87
>KOG0998|consensus
Probab=97.76 E-value=4.7e-05 Score=76.20 Aligned_cols=300 Identities=13% Similarity=0.079 Sum_probs=191.6
Q ss_pred chhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhhhhc-
Q psy3180 9 DKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAELAK- 87 (346)
Q Consensus 9 ~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~~~- 87 (346)
.-..+..+|+.+|..+.|.|+..+...++...+. ....+-++|...|..+.|.++..+|...+...-....+.....
T Consensus 9 ~q~~~~~~~~~~d~~~~G~i~g~~a~~f~~~s~L--~~qvl~qiws~~d~~~~g~l~~q~f~~~lrlva~aq~~~~~~~~ 86 (847)
T KOG0998|consen 9 GQPLFDQYFKSADPQGDGRITGAEAVAFLSKSGL--PDQVLGQIWSLADSSGKGFLNRQGFYAALRLVAQAQSGRELSAK 86 (847)
T ss_pred ccchHHHhhhccCcccCCcccHHHhhhhhhcccc--chhhhhccccccccccCCccccccccccchHhhhhhcccCcCcc
Confidence 3366788999999999999999999888777664 5567888999999999999999999866642111000000000
Q ss_pred c-----------------ccc-------------hHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHH
Q psy3180 88 D-----------------EDQ-------------GFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDL 137 (346)
Q Consensus 88 ~-----------------~~~-------------~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~ 137 (346)
. ... ...-.........+|..+.++ +|.++....+.+|... .+...
T Consensus 87 ~~~~~~~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~~~~qe~aky~q~f~s~~p~-~g~~sg~~~~pil~~s---~Lp~~ 162 (847)
T KOG0998|consen 87 KVLPASAVPPPPKISHDTSPPSRPSSSTSAAPFVPAITPQEQAKYDQIFRSLSPS-NGLLSGDKAKPILLNS---KLPSD 162 (847)
T ss_pred ccccccCCCCCCccCccCCCcccCCCCCCCcccCCCCCHHHHHHHHHHHhccCCC-CCccccchhhhhhhcC---CCChh
Confidence 0 000 000012234455567777766 8889988888888754 56677
Q ss_pred HHHHHHhhhccCCCCcccHHHHHHHHHhhhhhcccccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcC------
Q psy3180 138 VVVETMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPE------ 211 (346)
Q Consensus 138 ~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~------ 211 (346)
.+..+|...|.+.+|.++..||...+................ ....-.|...-....-...
T Consensus 163 ~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~~l~~~~~p~P~-------------~~p~~lIpps~~~~~~~~~~~~~~~ 229 (847)
T KOG0998|consen 163 VLGRIWELSDIDKDGNLDRDEFAVAMHLINDLLNGNSEPVPS-------------RLPPSLIPPSKSELSANSSSKAIPF 229 (847)
T ss_pred hhccccccccccccCCCChhhhhhhhhHHHHHhhcccCCCCc-------------cCCcccCCcchhcccccCccccccc
Confidence 888999999999999999999998886554431100000000 0000001111111000000
Q ss_pred ----ccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchhHHHHHHHhhhhhcCCCCCCCCHHHHHh
Q psy3180 212 ----ETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKN 287 (346)
Q Consensus 212 ----~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~ 287 (346)
............+....+.+.++.++-..+...+...... .....+.-...+..+|... |++.+|.|+..+.+.
T Consensus 230 ~~~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~-~~~vsp~d~~~~~~if~q~-d~~~dG~I~s~~~~~ 307 (847)
T KOG0998|consen 230 SQPFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLIVSW-SPKVSPSDKQKYSKIFSQV-DKDNDGSISSNEARN 307 (847)
T ss_pred ccccccccccccccccccchhcccCCcccccccccccccccccc-CcccChHHHHHHHHHHHhc-cccCCCccccccccc
Confidence 0011223334455555666777777666655544332221 0123333345777799998 999999999999999
Q ss_pred hcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhhcc
Q psy3180 288 WILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFVGS 331 (346)
Q Consensus 288 ~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~~~ 331 (346)
.+...| ++...+..+|...|+.+.|.|++.+|+-.+.+....
T Consensus 308 ~f~~~g--l~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~~~ 349 (847)
T KOG0998|consen 308 IFLPFG--LSKPRLAHVWLLADTQNTGTLSKDEFALAMHLLEQK 349 (847)
T ss_pred ccccCC--CChhhhhhhhhhcchhccCcccccccchhhhhhhhh
Confidence 998854 566669999999999999999999999877775544
No 88
>KOG4666|consensus
Probab=97.70 E-value=5.6e-05 Score=64.82 Aligned_cols=134 Identities=14% Similarity=0.004 Sum_probs=102.6
Q ss_pred HHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhcccccchHHHHH
Q psy3180 102 DKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNML 181 (346)
Q Consensus 102 l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~~~ 181 (346)
+...-...-..+.+.|-..||..-++-.. ...+..+|..||.+++|.++|.|.+..++.++.+. . ..
T Consensus 229 ld~y~~var~~kg~~igi~efa~~l~vpv-----sd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~-~-------t~ 295 (412)
T KOG4666|consen 229 LDGYVYVAREAKGPDIGIVEFAVNLRVPV-----SDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPP-V-------TP 295 (412)
T ss_pred HhhHHHHHHhccCCCcceeEeeeeeecch-----hhhhhhhhheecCCCCCcccHHHHhhhheeeeCCC-C-------cH
Confidence 33333334456788899999988887432 25677889999999999999999999999888872 1 12
Q ss_pred HHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCC
Q psy3180 182 NRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGD 250 (346)
Q Consensus 182 ~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~ 250 (346)
.-++-+|+.|+.+-||.+...+|.-+++... .+..-.+..++...+...+|+|++.+|..++.....
T Consensus 296 ~iiq~afk~f~v~eDg~~ge~~ls~ilq~~l--gv~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~~p~ 362 (412)
T KOG4666|consen 296 VIIQYAFKRFSVAEDGISGEHILSLILQVVL--GVEVLRVPVLFPSIEQKDDPKIYASNFRKFAATEPN 362 (412)
T ss_pred HHHHHHHHhcccccccccchHHHHHHHHHhc--CcceeeccccchhhhcccCcceeHHHHHHHHHhCch
Confidence 2337799999999999999999998888643 233344677888899889999999999987765443
No 89
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.69 E-value=1.4e-05 Score=59.68 Aligned_cols=63 Identities=21% Similarity=0.218 Sum_probs=45.9
Q ss_pred hhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHH
Q psy3180 7 KIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYRE 71 (346)
Q Consensus 7 ~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~ 71 (346)
...+..+...|.++|.|+||.|+..|+..+...+ .....=+..++...|.|+||.||..|+..
T Consensus 50 ~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 50 SECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp GGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 4556778899999999999999999999775545 22333478899999999999999999864
No 90
>KOG1029|consensus
Probab=97.67 E-value=0.0002 Score=68.20 Aligned_cols=131 Identities=20% Similarity=0.186 Sum_probs=99.9
Q ss_pred cCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhc--------------------
Q psy3180 111 IDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKD-------------------- 170 (346)
Q Consensus 111 ~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~-------------------- 170 (346)
+.+.|+|+-..-+.++-.. .++...+..+|...|.|+||+++..||...|..+...-
T Consensus 26 kp~~gfitg~qArnfflqS---~LP~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkLqG~~lP~~LPPsll~~~~~~ 102 (1118)
T KOG1029|consen 26 KPGQGFITGDQARNFFLQS---GLPTPVLAQIWALSDLDKDGRMDIREFSIAMKLIKLKLQGIQLPPVLPPSLLKQPPRN 102 (1118)
T ss_pred CCCCCccchHhhhhhHHhc---CCChHHHHHHHHhhhcCccccchHHHHHHHHHHHHHHhcCCcCCCCCChHHhccCCcC
Confidence 3678999999998877644 56678899999999999999999999986664332210
Q ss_pred ---------------------------------------------------------------cccc------chHH---
Q psy3180 171 ---------------------------------------------------------------EDQG------FSYK--- 178 (346)
Q Consensus 171 ---------------------------------------------------------------~~~~------~~~~--- 178 (346)
+..+ ..+.
T Consensus 103 ~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~spl~~~ss~se~~~~~~s~~ 182 (1118)
T KOG1029|consen 103 APSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSPLPHDSSVSEGRPSIESVN 182 (1118)
T ss_pred CCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCcchhhcCccchhhh
Confidence 0000 0000
Q ss_pred ---------HHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhc
Q psy3180 179 ---------NMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFR 247 (346)
Q Consensus 179 ---------~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~ 247 (346)
....+.+++|+..|+.-+|+||...-+.+|-.. .++...+..+|...|.|+||+++.+||+-.|..
T Consensus 183 q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS---~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~l 257 (1118)
T KOG1029|consen 183 QLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQS---GLPQNQLAHIWTLSDVDGDGKLSADEFILAMHL 257 (1118)
T ss_pred hhhhccccchhhhHHHHHhhhcccccccccccHHHHHHHHhc---CCchhhHhhheeeeccCCCCcccHHHHHHHHHH
Confidence 012345889999999999999999999988775 477888999999999999999999999986643
No 91
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.64 E-value=3.2e-05 Score=40.70 Aligned_cols=23 Identities=35% Similarity=0.663 Sum_probs=13.3
Q ss_pred HHHhhhhhcCCCCCCCCHHHHHhh
Q psy3180 265 KEQFAMYRDKNGDGFMDEEEVKNW 288 (346)
Q Consensus 265 ~~~F~~~~D~d~~G~Is~~E~~~~ 288 (346)
+.+|..+ |.|++|.||.+||+++
T Consensus 2 ~~~F~~~-D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQF-DTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHH-TTTSSSEEEHHHHHHH
T ss_pred HHHHHHH-cCCCCCcCCHHHHHHH
Confidence 3455555 6666666666666553
No 92
>KOG1029|consensus
Probab=97.59 E-value=0.00018 Score=68.45 Aligned_cols=134 Identities=21% Similarity=0.322 Sum_probs=101.1
Q ss_pred HHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcC------CCCCC-------
Q psy3180 187 RWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRG------GDTDG------- 253 (346)
Q Consensus 187 ~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~------~~~~~------- 253 (346)
.|..+ +.+.|+|+...-+.++-..+ ++...+..+|...|.|.||+++..||.-.|... +....
T Consensus 21 qF~~L-kp~~gfitg~qArnfflqS~---LP~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkLqG~~lP~~LPPsll 96 (1118)
T KOG1029|consen 21 QFGQL-KPGQGFITGDQARNFFLQSG---LPTPVLAQIWALSDLDKDGRMDIREFSIAMKLIKLKLQGIQLPPVLPPSLL 96 (1118)
T ss_pred HHhcc-CCCCCccchHhhhhhHHhcC---CChHHHHHHHHhhhcCccccchHHHHHHHHHHHHHHhcCCcCCCCCChHHh
Confidence 34444 35678999999888887764 666678889999999999999999998755320 00000
Q ss_pred ---------------------------------------------------------CC------------------C--
Q psy3180 254 ---------------------------------------------------------DE------------------E-- 256 (346)
Q Consensus 254 ---------------------------------------------------------~~------------------~-- 256 (346)
+. .
T Consensus 97 ~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~spl~~~ss~se~~~ 176 (1118)
T KOG1029|consen 97 KQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSPLPHDSSVSEGRP 176 (1118)
T ss_pred ccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCcchhhcCc
Confidence 00 0
Q ss_pred -------CchhH------HHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHH
Q psy3180 257 -------LPDWV------KNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323 (346)
Q Consensus 257 -------~~~~~------~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~ 323 (346)
...|. .+++..|... |+..+|++|...-+.+|...+ ++...+..||..-|.|+||+|+-+||+-
T Consensus 177 ~~~s~~q~~eWAVp~~~klKY~QlFNa~-DktrsG~Lsg~qaR~aL~qS~--Lpq~~LA~IW~LsDvd~DGkL~~dEfil 253 (1118)
T KOG1029|consen 177 SIESVNQLEEWAVPQHNKLKYRQLFNAL-DKTRSGYLSGQQARSALGQSG--LPQNQLAHIWTLSDVDGDGKLSADEFIL 253 (1118)
T ss_pred cchhhhhhhhccccchhhhHHHHHhhhc-ccccccccccHHHHHHHHhcC--CchhhHhhheeeeccCCCCcccHHHHHH
Confidence 00121 3567789998 999999999999999997775 5556699999999999999999999999
Q ss_pred HHhh
Q psy3180 324 KYDL 327 (346)
Q Consensus 324 ~~~~ 327 (346)
++.+
T Consensus 254 am~l 257 (1118)
T KOG1029|consen 254 AMHL 257 (1118)
T ss_pred HHHH
Confidence 8876
No 93
>KOG1707|consensus
Probab=97.56 E-value=0.00024 Score=66.20 Aligned_cols=145 Identities=14% Similarity=0.171 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccC-----CCCcccHHHHHHHHHhhhhh---
Q psy3180 98 MLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKD-----KDGKVSLREYIEVDAAELAK--- 169 (346)
Q Consensus 98 ~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~-----~dg~i~~~eF~~~~~~~~~~--- 169 (346)
....+.++|...|.|++|.+|-.|+..+-..+.+..+...++..+-...+.. .+..++...|+.........
T Consensus 193 ~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfiergr~ 272 (625)
T KOG1707|consen 193 CVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLFIERGRH 272 (625)
T ss_pred HHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHhccc
Confidence 3567899999999999999999999888877766677777777766665544 23457777777443222111
Q ss_pred -----------------------------ccc-ccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHH
Q psy3180 170 -----------------------------DED-QGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDL 219 (346)
Q Consensus 170 -----------------------------~~~-~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~ 219 (346)
++. .-+.-......+...|..||.++||.++..|++.+++.....++...
T Consensus 273 EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~~~ 352 (625)
T KOG1707|consen 273 ETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWTSS 352 (625)
T ss_pred cchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCCCC
Confidence 011 11112345677899999999999999999999999997653332211
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHh
Q psy3180 220 VVVETMEDIDKDKDGKVSLREYIGDM 245 (346)
Q Consensus 220 ~~~~l~~~~d~~~dg~i~~~eF~~~l 245 (346)
.... ..-.+..|+++++-|+..+
T Consensus 353 ~~~~---~t~~~~~G~ltl~g~l~~W 375 (625)
T KOG1707|consen 353 PYKD---STVKNERGWLTLNGFLSQW 375 (625)
T ss_pred cccc---cceecccceeehhhHHHHH
Confidence 0000 1112367899999998844
No 94
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.54 E-value=6.3e-05 Score=56.10 Aligned_cols=59 Identities=27% Similarity=0.353 Sum_probs=44.0
Q ss_pred HHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHH
Q psy3180 262 KNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILA 323 (346)
Q Consensus 262 ~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~ 323 (346)
..+.=.|..+ |.|+||.|+..|++.+...+ .....-+..++..+|.|+||+||..|+..
T Consensus 54 ~~~~W~F~~L-D~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 54 RVVHWKFCQL-DRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHHH---T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhHhhh-cCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 4566679998 99999999999999988766 34444688999999999999999999864
No 95
>KOG4666|consensus
Probab=97.50 E-value=0.00027 Score=60.73 Aligned_cols=121 Identities=14% Similarity=0.042 Sum_probs=92.0
Q ss_pred CCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchhHHHHHHHhhhhhc
Q psy3180 194 DGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYRD 273 (346)
Q Consensus 194 ~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~~~~~~~~F~~~~D 273 (346)
.+.+.|...|+...++..- ......++..||.+++|.++|.|.+..+.-.... +.....++.+|+.| +
T Consensus 239 ~kg~~igi~efa~~l~vpv-----sd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p------~~t~~iiq~afk~f-~ 306 (412)
T KOG4666|consen 239 AKGPDIGIVEFAVNLRVPV-----SDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGP------PVTPVIIQYAFKRF-S 306 (412)
T ss_pred ccCCCcceeEeeeeeecch-----hhhhhhhhheecCCCCCcccHHHHhhhheeeeCC------CCcHHHHHHHHHhc-c
Confidence 4566777777776665421 1456778999999999999999999877765551 12235889999999 9
Q ss_pred CCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhh
Q psy3180 274 KNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDL 327 (346)
Q Consensus 274 ~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~ 327 (346)
.+-||.+...+|--+++.. ..+..-.+..+|...+.-.+|+|++++|.++..+
T Consensus 307 v~eDg~~ge~~ls~ilq~~-lgv~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~ 359 (412)
T KOG4666|consen 307 VAEDGISGEHILSLILQVV-LGVEVLRVPVLFPSIEQKDDPKIYASNFRKFAAT 359 (412)
T ss_pred cccccccchHHHHHHHHHh-cCcceeeccccchhhhcccCcceeHHHHHHHHHh
Confidence 9999999999988877553 2233333667899999999999999999986655
No 96
>KOG0169|consensus
Probab=97.28 E-value=0.0016 Score=62.66 Aligned_cols=144 Identities=13% Similarity=0.120 Sum_probs=114.2
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhh
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAE 84 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~ 84 (346)
+......-+..+|...|++++|+++..+...++..+...+...-+..+|+..+..++|++...+|..+.......
T Consensus 130 ~~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~r----- 204 (746)
T KOG0169|consen 130 QRSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKR----- 204 (746)
T ss_pred hcchHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccC-----
Confidence 345566778899999999999999999999999999999988888999999999999999999999987664433
Q ss_pred hhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCcc-chhhhHHHHHHHHhhhccC----CCCcccHHHH
Q psy3180 85 LAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEE-TAHMRDLVVVETMEDIDKD----KDGKVSLREY 159 (346)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~-~~~~~~~~~~~~~~~~d~~----~dg~i~~~eF 159 (346)
- ++..+|..+-.+ .++++..++..+|.... ........+.+++..+... ..+.++++.|
T Consensus 205 --------------p-ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF 268 (746)
T KOG0169|consen 205 --------------P-EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGF 268 (746)
T ss_pred --------------c-hHHHHHHHHhCC-CCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccccceecHHHH
Confidence 1 456677776655 89999999999988543 2345667777777776544 4466999999
Q ss_pred HHHHHhhhhh
Q psy3180 160 IEVDAAELAK 169 (346)
Q Consensus 160 ~~~~~~~~~~ 169 (346)
..++......
T Consensus 269 ~~yL~S~~~~ 278 (746)
T KOG0169|consen 269 TRYLFSPDCN 278 (746)
T ss_pred HHHhcCccCC
Confidence 9998654443
No 97
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.27 E-value=0.00047 Score=42.60 Aligned_cols=47 Identities=11% Similarity=0.177 Sum_probs=39.1
Q ss_pred cCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHh
Q psy3180 28 VSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVY 74 (346)
Q Consensus 28 is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 74 (346)
+|..|++.+|+.+...+.+.-+..+|+..|..++|++.-+||..++.
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 67899999999999999999999999999999999999999998864
No 98
>KOG4065|consensus
Probab=97.27 E-value=0.00059 Score=49.41 Aligned_cols=63 Identities=16% Similarity=0.212 Sum_probs=48.1
Q ss_pred hhhh-hhhhHhhccCCCCccCHHHHHHHHHHhhcc---------c-ccch----HHHhhhhcCCCCCCcccHHHHHHH
Q psy3180 10 KDKD-GLIVDKIDKDKDGFVSKEELKEWIQFTQKR---------Y-IHND----VESQWRTHNPEDKEKITWDEYREK 72 (346)
Q Consensus 10 ~~~l-~~~F~~~D~d~~G~is~~E~~~~l~~~~~~---------~-~~~~----~~~~~~~~D~~~dg~i~~~EF~~~ 72 (346)
.+++ -..|++.|.|+||+++--|+.+++...-.. + +..+ +..+++.-|.|+||.|+|-||+..
T Consensus 65 peqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 65 PEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred HHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 3444 367999999999999999999999975431 1 1223 345677789999999999999863
No 99
>KOG0046|consensus
Probab=97.17 E-value=0.00062 Score=62.34 Aligned_cols=73 Identities=11% Similarity=0.239 Sum_probs=62.7
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhccc---ccchHHHhhhhcCCCCCCcccHHHHHHHHhccch
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRY---IHNDVESQWRTHNPEDKEKITWDEYREKVYGFLD 78 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~---~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~ 78 (346)
+..+....|+..|..+| |++|+|+..|+..++.+.+... ..++++.++...+.|.+|.|+++||+..+.+..+
T Consensus 13 ~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~s 88 (627)
T KOG0046|consen 13 LTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLKS 88 (627)
T ss_pred ccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhhh
Confidence 45677888999999999 9999999999999999876543 4668899999999999999999999997765443
No 100
>KOG1955|consensus
Probab=97.14 E-value=0.00084 Score=60.96 Aligned_cols=68 Identities=26% Similarity=0.319 Sum_probs=60.1
Q ss_pred HHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhhcc
Q psy3180 261 VKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFVGS 331 (346)
Q Consensus 261 ~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~~~ 331 (346)
.+.+...|+.+ ..|-+|+|+..--++.+... .++.+++..||...|.+.||.|++.||+.+|++.+..
T Consensus 230 ReYYvnQFrtv-QpDp~gfisGsaAknFFtKS--klpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVVaR 297 (737)
T KOG1955|consen 230 REYYVNQFRTV-QPDPHGFISGSAAKNFFTKS--KLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVVAR 297 (737)
T ss_pred HHHHHhhhhcc-cCCcccccccHHHHhhhhhc--cCchHHHHHHHhhcccCccccccHHHHHhhHhheeec
Confidence 35677789997 99999999999999999876 4666789999999999999999999999999997653
No 101
>KOG0046|consensus
Probab=97.02 E-value=0.0012 Score=60.58 Aligned_cols=68 Identities=18% Similarity=0.292 Sum_probs=58.9
Q ss_pred HHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCC---cHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhhc
Q psy3180 261 VKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDH---SDAEARHLIYESDSDADQKLTKDEILAKYDLFVG 330 (346)
Q Consensus 261 ~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~---~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~~ 330 (346)
+..++..|... | +++|+|+..|+..++...+... ..++++.++...+.|.+|+|+|+||+..|.....
T Consensus 18 l~~l~~kF~~~-d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~s 88 (627)
T KOG0046|consen 18 LRELKEKFNKL-D-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLKS 88 (627)
T ss_pred HHHHHHHHHhh-c-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhhh
Confidence 45789999998 9 9999999999999998887554 4688999999999999999999999996655443
No 102
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.82 E-value=0.0013 Score=35.09 Aligned_cols=27 Identities=30% Similarity=0.325 Sum_probs=21.8
Q ss_pred hhhhhHhhccCCCCccCHHHHHHHHHH
Q psy3180 13 DGLIVDKIDKDKDGFVSKEELKEWIQF 39 (346)
Q Consensus 13 l~~~F~~~D~d~~G~is~~E~~~~l~~ 39 (346)
++.+|+.+|.+++|.|+..||..++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 567888888888888888888877654
No 103
>KOG0169|consensus
Probab=96.44 E-value=0.027 Score=54.48 Aligned_cols=140 Identities=13% Similarity=0.165 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhcccccch
Q psy3180 97 NMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFS 176 (346)
Q Consensus 97 ~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~ 176 (346)
....++..+|...|++++|.++..+...++..... .+...-+..+++..+...++++...+|..+.......+
T Consensus 133 ~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~-~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rp------ 205 (746)
T KOG0169|consen 133 RREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNV-QLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRP------ 205 (746)
T ss_pred hHHHHHHHHHHHHccccccccchhhHHHHHHHHHH-hhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCc------
Confidence 34577889999999999999999999999987644 77888888889888888999999999999987776661
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCc-cccCcHHHHHHHHhhhCCC----CCCcccHHHHHHHhhcCCC
Q psy3180 177 YKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEE-TAHMRDLVVVETMEDIDKD----KDGKVSLREYIGDMFRGGD 250 (346)
Q Consensus 177 ~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~-~~~~~~~~~~~l~~~~d~~----~dg~i~~~eF~~~l~~~~~ 250 (346)
.+...|..+-.+ .++++..++..++.... ....+...+..++..+... ..+.++++.|..+|.....
T Consensus 206 ------ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~S~~~ 277 (746)
T KOG0169|consen 206 ------EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLFSPDC 277 (746)
T ss_pred ------hHHHHHHHHhCC-CCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccccceecHHHHHHHhcCccC
Confidence 236677776555 88999999999998653 4567777788888776432 4566999999998866433
No 104
>KOG4065|consensus
Probab=96.32 E-value=0.0075 Score=43.82 Aligned_cols=60 Identities=15% Similarity=0.241 Sum_probs=44.9
Q ss_pred HHHHHHhccCCCCCCCHHHHHhhcCCc---------cchhhhHHHHH----HHHhhhccCCCCcccHHHHHHH
Q psy3180 103 KRRWDVADIDGDRALTREEFASFLHPE---------ETAHMRDLVVV----ETMEDIDKDKDGKVSLREYIEV 162 (346)
Q Consensus 103 ~~~F~~~D~~~~g~i~~~ef~~~l~~~---------~~~~~~~~~~~----~~~~~~d~~~dg~i~~~eF~~~ 162 (346)
-..|+.+|.|++|.|+--|+.+++.-. ..|-.++.++. .+++--|.|+||.|+|-||+..
T Consensus 70 fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 70 FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 358999999999999999998888611 12234555554 4455578999999999999864
No 105
>KOG1707|consensus
Probab=96.05 E-value=0.036 Score=52.20 Aligned_cols=147 Identities=16% Similarity=0.191 Sum_probs=92.0
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCC-----CCCcccHHHHHHHhhc--
Q psy3180 175 FSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKD-----KDGKVSLREYIGDMFR-- 247 (346)
Q Consensus 175 ~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~-----~dg~i~~~eF~~~l~~-- 247 (346)
...++-...+.++|...|.|++|.+|-.|+-.+=...-..++.+.++..+....+.. .++.++..-|+-.-..
T Consensus 188 elkp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfi 267 (625)
T KOG1707|consen 188 ELKPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLFI 267 (625)
T ss_pred cccHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHHH
Confidence 333455667799999999999999999999887665444556655544444443222 1233555555441110
Q ss_pred --CCCC-------------------------------CCCCCCchhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCC
Q psy3180 248 --GGDT-------------------------------DGDEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDF 294 (346)
Q Consensus 248 --~~~~-------------------------------~~~~~~~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~ 294 (346)
.... .+-+-.+...+-+...|..| |.|+||.++..|+..++...+.
T Consensus 268 ergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~-D~d~Dg~L~p~El~~LF~~~P~ 346 (625)
T KOG1707|consen 268 ERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKF-DRDNDGALSPEELKDLFSTAPG 346 (625)
T ss_pred HhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhc-cCCCCCCcCHHHHHHHhhhCCC
Confidence 0000 00112223446788899999 9999999999999999988753
Q ss_pred CC----cHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh
Q psy3180 295 DH----SDAEARHLIYESDSDADQKLTKDEILAKYDLF 328 (346)
Q Consensus 295 ~~----~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~ 328 (346)
.. ...+. --.+..|.++|.-|+..|.+.
T Consensus 347 ~pW~~~~~~~~------t~~~~~G~ltl~g~l~~WsL~ 378 (625)
T KOG1707|consen 347 SPWTSSPYKDS------TVKNERGWLTLNGFLSQWSLM 378 (625)
T ss_pred CCCCCCccccc------ceecccceeehhhHHHHHHHH
Confidence 22 11100 011368899999999877663
No 106
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=95.80 E-value=0.01 Score=41.66 Aligned_cols=66 Identities=20% Similarity=0.306 Sum_probs=53.6
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHhhcCCc-cchhhhHHHHHHHHhhhccC----CCCcccHHHHHHHHHhhh
Q psy3180 101 RDKRRWDVADIDGDRALTREEFASFLHPE-ETAHMRDLVVVETMEDIDKD----KDGKVSLREYIEVDAAEL 167 (346)
Q Consensus 101 ~l~~~F~~~D~~~~g~i~~~ef~~~l~~~-~~~~~~~~~~~~~~~~~d~~----~dg~i~~~eF~~~~~~~~ 167 (346)
++..+|..+-. +.+.++..+|..+|+.. +.+..+...+..++..+.++ ..+.+|+++|..++....
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~ 71 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDE 71 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTT
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCc
Confidence 36789999966 89999999999999743 33356899999999998765 479999999999996654
No 107
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.62 E-value=0.011 Score=31.31 Aligned_cols=26 Identities=46% Similarity=0.754 Sum_probs=15.7
Q ss_pred HHHHhhhhhcCCCCCCCCHHHHHhhcC
Q psy3180 264 EKEQFAMYRDKNGDGFMDEEEVKNWIL 290 (346)
Q Consensus 264 ~~~~F~~~~D~d~~G~Is~~E~~~~l~ 290 (346)
++.+|..+ |.+++|.|+..||..++.
T Consensus 2 ~~~~f~~~-d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLF-DKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHH-CCCCCCcEeHHHHHHHHH
Confidence 34556665 666666666666666553
No 108
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=95.26 E-value=0.027 Score=39.42 Aligned_cols=66 Identities=21% Similarity=0.362 Sum_probs=53.3
Q ss_pred HHHHHHHhcCCCCCCcCHHHHHhhcCcCccc-cCcHHHHHHHHhhhCCC----CCCcccHHHHHHHhhcCCC
Q psy3180 184 DKRRWDVADIDGDRALTREEFASFLHPEETA-HMRDLVVVETMEDIDKD----KDGKVSLREYIGDMFRGGD 250 (346)
Q Consensus 184 ~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~-~~~~~~~~~l~~~~d~~----~dg~i~~~eF~~~l~~~~~ 250 (346)
+..+|..+-. +.+.+|.++|..+|...... .++...+..++..+..+ ..+.+++++|..+|.....
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~N 72 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDEN 72 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTTC
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCcC
Confidence 4678999966 78999999999999764433 56889999999998654 4689999999999987554
No 109
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=95.24 E-value=0.1 Score=41.45 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=73.3
Q ss_pred hhhhhhhHhhccCCCCccCHHHHHHHHHHhhcc-----------------------------------------------
Q psy3180 11 DKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKR----------------------------------------------- 43 (346)
Q Consensus 11 ~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~----------------------------------------------- 43 (346)
..|.+--..||+|+||.|.+-|--..++.+|..
T Consensus 7 T~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~ 86 (174)
T PF05042_consen 7 TVLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGA 86 (174)
T ss_pred cHHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCccc
Confidence 456677778999999999999998888876542
Q ss_pred ------cccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhhhhccccchHHHHHHHHHHHHHHHHhccCCCCCC
Q psy3180 44 ------YIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRAL 117 (346)
Q Consensus 44 ------~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i 117 (346)
..+..++.+|+.++..+.+.+++.|...++.+-....+.-.. -....+-.-+|.. -.+.+|.+
T Consensus 87 YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW----------~a~~~EW~~~y~L-~~d~dG~l 155 (174)
T PF05042_consen 87 YDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGW----------FAAFFEWGALYIL-AKDKDGFL 155 (174)
T ss_pred cccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchh----------hhhhhHHHHHHHH-HcCcCCcE
Confidence 123457889999999999999999999998762222111000 0111222333433 36778899
Q ss_pred CHHHHHhhcCC
Q psy3180 118 TREEFASFLHP 128 (346)
Q Consensus 118 ~~~ef~~~l~~ 128 (346)
..+.++.+..-
T Consensus 156 ~Ke~iR~vYDG 166 (174)
T PF05042_consen 156 SKEDIRGVYDG 166 (174)
T ss_pred eHHHHhhhcch
Confidence 99998887763
No 110
>KOG1955|consensus
Probab=94.65 E-value=0.044 Score=50.18 Aligned_cols=69 Identities=12% Similarity=0.207 Sum_probs=59.5
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
+..++.+..-.-|+-+-.|-+|+|+-.--+.++.+-.. +-.++.-+|+.-|.+.||.+++.||++.|--
T Consensus 225 IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKSkl--pi~ELshIWeLsD~d~DGALtL~EFcAAfHL 293 (737)
T KOG1955|consen 225 ITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKSKL--PIEELSHIWELSDVDRDGALTLSEFCAAFHL 293 (737)
T ss_pred cCHHHHHHHHhhhhcccCCcccccccHHHHhhhhhccC--chHHHHHHHhhcccCccccccHHHHHhhHhh
Confidence 45677777788888999999999999999988877654 4578999999999999999999999998854
No 111
>KOG0998|consensus
Probab=94.52 E-value=0.045 Score=55.33 Aligned_cols=218 Identities=15% Similarity=0.118 Sum_probs=146.6
Q ss_pred HHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhcc----------
Q psy3180 102 DKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDE---------- 171 (346)
Q Consensus 102 l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~---------- 171 (346)
...+|+.+|..+.|+|+..+...++... .+....+..+|...|..+.|.++..+|...++.......
T Consensus 13 ~~~~~~~~d~~~~G~i~g~~a~~f~~~s---~L~~qvl~qiws~~d~~~~g~l~~q~f~~~lrlva~aq~~~~~~~~~~~ 89 (847)
T KOG0998|consen 13 FDQYFKSADPQGDGRITGAEAVAFLSKS---GLPDQVLGQIWSLADSSGKGFLNRQGFYAALRLVAQAQSGRELSAKKVL 89 (847)
T ss_pred HHHhhhccCcccCCcccHHHhhhhhhcc---ccchhhhhccccccccccCCccccccccccchHhhhhhcccCcCccccc
Confidence 4678999999999999999999999865 567888999999999999999999999976644322210
Q ss_pred -------------------ccc----------chHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHH
Q psy3180 172 -------------------DQG----------FSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVV 222 (346)
Q Consensus 172 -------------------~~~----------~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~ 222 (346)
... ........+...+|+..... +|.++....+.++... .+......
T Consensus 90 ~~~~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~~~~qe~aky~q~f~s~~p~-~g~~sg~~~~pil~~s---~Lp~~~l~ 165 (847)
T KOG0998|consen 90 PASAVPPPPKISHDTSPPSRPSSSTSAAPFVPAITPQEQAKYDQIFRSLSPS-NGLLSGDKAKPILLNS---KLPSDVLG 165 (847)
T ss_pred cccCCCCCCccCccCCCcccCCCCCCCcccCCCCCHHHHHHHHHHHhccCCC-CCccccchhhhhhhcC---CCChhhhc
Confidence 000 00011223335557777665 7889998888888775 36666778
Q ss_pred HHHhhhCCCCCCcccHHHHHHHhhcCCCCCC--CCCCch----hH------------------------------HHHHH
Q psy3180 223 ETMEDIDKDKDGKVSLREYIGDMFRGGDTDG--DEELPD----WV------------------------------KNEKE 266 (346)
Q Consensus 223 ~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~--~~~~~~----~~------------------------------~~~~~ 266 (346)
++|...|.+.+|.++..||...|........ ..+.|. +. ..+..
T Consensus 166 ~iw~l~d~d~~g~Ld~~ef~~am~l~~~~l~~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (847)
T KOG0998|consen 166 RIWELSDIDKDGNLDRDEFAVAMHLINDLLNGNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSS 245 (847)
T ss_pred cccccccccccCCCChhhhhhhhhHHHHHhhcccCCCCccCCcccCCcchhcccccCccccccccccccccccccccccc
Confidence 8999999999999999999986654322111 111110 00 01122
Q ss_pred HhhhhhcCCCCCCCCHHHHHhhcCCCCC---CCcHH---HHHHHHhhhccCCCCCcCHHHHHHHHhh
Q psy3180 267 QFAMYRDKNGDGFMDEEEVKNWILPPDF---DHSDA---EARHLIYESDSDADQKLTKDEILAKYDL 327 (346)
Q Consensus 267 ~F~~~~D~d~~G~Is~~E~~~~l~~~~~---~~~~~---~~~~l~~~~D~~~dG~i~~~eF~~~~~~ 327 (346)
+-..- +...++.++..++.-.+....- .+++. ...++|...|.+.+|.|+..+....|.-
T Consensus 246 l~~~s-~~~~~~s~~~~~~~~~~q~~~s~~~~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~ 311 (847)
T KOG0998|consen 246 LVDLS-ALNSNPSLSSLSLASSMQLIVSWSPKVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLP 311 (847)
T ss_pred ccchh-cccCCccccccccccccccccccCcccChHHHHHHHHHHHhccccCCCccccccccccccc
Confidence 22332 4556677766666555444322 34443 3566899999999999999998875544
No 112
>KOG3555|consensus
Probab=93.98 E-value=0.053 Score=47.45 Aligned_cols=67 Identities=16% Similarity=0.165 Sum_probs=54.7
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
++++=+..+..+|.++|.|.+|.++..|+..+-..- -+.=++.+|..-|.-.||+||-.|+..-|..
T Consensus 244 ~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ldk----nE~CikpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 244 ILPICKDSLGWMFNKLDTNYDLLLDQSELRAIELDK----NEACIKPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred cCcchhhhhhhhhhccccccccccCHHHhhhhhccC----chhHHHHHHhhhcccccCccccchhhhhhcc
Confidence 345667889999999999999999999998653221 1234788999999999999999999987764
No 113
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=93.97 E-value=0.046 Score=40.06 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=24.5
Q ss_pred CCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh
Q psy3180 295 DHSDAEARHLIYESDSDADQKLTKDEILAKYDLF 328 (346)
Q Consensus 295 ~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~ 328 (346)
.||+++++.+|..+-.|..|+|.|.||+..|..=
T Consensus 3 iLtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs~e 36 (118)
T PF08976_consen 3 ILTDEQFDRLWNEMPVNAKGRLKYQEFLSKFSSE 36 (118)
T ss_dssp ---HHHHHHHHTTS-B-TTS-EEHHHHHHHT---
T ss_pred cccHHHhhhhhhhCcCCccCCEeHHHHHHHcccc
Confidence 4799999999999999999999999999988753
No 114
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=93.86 E-value=0.52 Score=37.49 Aligned_cols=71 Identities=15% Similarity=0.232 Sum_probs=51.8
Q ss_pred CcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchhH---HHHHHHhhhhhcCCCCCCCCHHHHHhhcCC
Q psy3180 216 MRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWV---KNEKEQFAMYRDKNGDGFMDEEEVKNWILP 291 (346)
Q Consensus 216 ~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~~---~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~ 291 (346)
..+...+.++..++..+.+.+++.|....+....... ..-.|. -.+..+|... ++.+|.++++.++.+...
T Consensus 93 Fvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~---D~~GW~a~~~EW~~~y~L~--~d~dG~l~Ke~iR~vYDG 166 (174)
T PF05042_consen 93 FVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNAN---DPFGWFAAFFEWGALYILA--KDKDGFLSKEDIRGVYDG 166 (174)
T ss_pred CCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccC---CcchhhhhhhHHHHHHHHH--cCcCCcEeHHHHhhhcch
Confidence 4467789999999988888999999999888766521 111232 3456666654 677899999999988743
No 115
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=92.34 E-value=0.11 Score=34.71 Aligned_cols=58 Identities=9% Similarity=0.169 Sum_probs=42.1
Q ss_pred hchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCC-------CCcccHHHHHHHH
Q psy3180 8 IDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPED-------KEKITWDEYREKV 73 (346)
Q Consensus 8 ~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~-------dg~i~~~EF~~~~ 73 (346)
.+.+++..+|+.+ +++.++|+..||++. +++++++-+.+.+..-. -|.++|..|...+
T Consensus 3 ~s~eqv~~aFr~l-A~~KpyVT~~dLr~~-------l~pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l 67 (69)
T PF08726_consen 3 DSAEQVEEAFRAL-AGGKPYVTEEDLRRS-------LTPEQAEYCISRMPPYEGPDGDAIPGAYDYESFTNSL 67 (69)
T ss_dssp STCHHHHHHHHHH-CTSSSCEEHHHHHHH-------S-CCCHHHHHCCSEC--SSS----TTEEECHHHHCCC
T ss_pred CCHHHHHHHHHHH-HcCCCcccHHHHHHH-------cCcHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHHH
Confidence 3567899999999 999999999999976 45556666666554333 2678998887654
No 116
>KOG4347|consensus
Probab=92.32 E-value=0.3 Score=46.66 Aligned_cols=78 Identities=15% Similarity=0.196 Sum_probs=61.9
Q ss_pred CCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhcccccchHHHHHHHHHHHHHHhcCCCC
Q psy3180 117 LTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGD 196 (346)
Q Consensus 117 i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~ 196 (346)
|....|..+.+.......+...+..+|+.+|.+.+|.++|.+++..+..+... ...+.++-.|+++|.+.+
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~---------~~~ek~~l~y~lh~~p~~ 605 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAG---------DALEKLKLLYKLHDPPAD 605 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhh---------hHHHHHHHHHhhccCCcc
Confidence 34444455555444444566778999999999999999999999999988887 566677889999999999
Q ss_pred CCcCHHHH
Q psy3180 197 RALTREEF 204 (346)
Q Consensus 197 G~is~~e~ 204 (346)
....++.
T Consensus 606 -~~d~e~~ 612 (671)
T KOG4347|consen 606 -ELDREEV 612 (671)
T ss_pred -ccccccc
Confidence 8888887
No 117
>KOG2243|consensus
Probab=92.13 E-value=0.21 Score=51.41 Aligned_cols=68 Identities=16% Similarity=0.388 Sum_probs=55.9
Q ss_pred HhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhhcccccchhhhh
Q psy3180 267 QFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFVGSQATDFGEAL 340 (346)
Q Consensus 267 ~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~~~~~~~~~~~~ 340 (346)
.|+.| |.||.|.||+.+|+..|... .+.+..+++-+......|.+...+|++|++.|. .-+-|.|=|+
T Consensus 4062 tfkey-dpdgkgiiskkdf~kame~~-k~ytqse~dfllscae~dend~~~y~dfv~rfh----epakdigfnv 4129 (5019)
T KOG2243|consen 4062 TFKEY-DPDGKGIISKKDFHKAMEGH-KHYTQSEIDFLLSCAEADENDMFDYEDFVDRFH----EPAKDIGFNV 4129 (5019)
T ss_pred cchhc-CCCCCccccHHHHHHHHhcc-ccchhHHHHHHHHhhccCccccccHHHHHHHhc----CchhhcCcch
Confidence 58999 99999999999999999774 467788899999999999999999999999554 3444444433
No 118
>KOG4578|consensus
Probab=91.98 E-value=0.11 Score=45.16 Aligned_cols=66 Identities=15% Similarity=0.191 Sum_probs=52.0
Q ss_pred hhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccc-hHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 10 KDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHN-DVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 10 ~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~-~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
.+.....|.++|.|.|+-|...|.+.+=+.+...-... =.+.+++.-|.|+|-+|++.|++.-+..
T Consensus 332 eRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 332 ERVVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred hheeeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 34568899999999999999999887655543333333 3577899999999999999999887654
No 119
>KOG0042|consensus
Probab=91.43 E-value=0.15 Score=47.80 Aligned_cols=74 Identities=7% Similarity=0.094 Sum_probs=66.3
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccch
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLD 78 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~ 78 (346)
..+++...++.-|..+|.|+.|+++.....++|...+...+.+....+.+..|.+..|.++..||.+.+.....
T Consensus 587 ~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~ 660 (680)
T KOG0042|consen 587 LTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKN 660 (680)
T ss_pred cCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhc
Confidence 45677788889999999999999999999999999988888889999999999999999999999998876444
No 120
>KOG3555|consensus
Probab=91.37 E-value=1.4 Score=38.89 Aligned_cols=105 Identities=14% Similarity=0.067 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCcc--ccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCC
Q psy3180 177 YKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEET--AHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGD 254 (346)
Q Consensus 177 ~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~--~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~ 254 (346)
+..+..+++.=|..+=.+.++......+...-+.+.. .++-...+..||...|.|.||.++..|..........
T Consensus 206 L~~lg~RL~dWF~~lhe~s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ldknE---- 281 (434)
T KOG3555|consen 206 LRRLGNRLRDWFKALHEDSSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQSELRAIELDKNE---- 281 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCHHHhhhhhccCch----
Confidence 3445566677777666666666666655555443321 2344567888899999999999998887765554443
Q ss_pred CCCchhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCC
Q psy3180 255 EELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPD 293 (346)
Q Consensus 255 ~~~~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~ 293 (346)
.-++..|..- |...+|.||-.|+-..+...+
T Consensus 282 -------~CikpFfnsC-D~~kDg~iS~~EWC~CF~k~~ 312 (434)
T KOG3555|consen 282 -------ACIKPFFNSC-DTYKDGSISTNEWCYCFQKSD 312 (434)
T ss_pred -------hHHHHHHhhh-cccccCccccchhhhhhccCC
Confidence 3667778887 888899999999888886655
No 121
>KOG3866|consensus
Probab=90.85 E-value=0.29 Score=42.30 Aligned_cols=60 Identities=17% Similarity=0.281 Sum_probs=44.2
Q ss_pred hhhHhhccCCCCccCHHHHHHHHHHhhc---cccc--chH-----------HHhhhhcCCCCCCcccHHHHHHHHh
Q psy3180 15 LIVDKIDKDKDGFVSKEELKEWIQFTQK---RYIH--NDV-----------ESQWRTHNPEDKEKITWDEYREKVY 74 (346)
Q Consensus 15 ~~F~~~D~d~~G~is~~E~~~~l~~~~~---~~~~--~~~-----------~~~~~~~D~~~dg~i~~~EF~~~~~ 74 (346)
-.|...|.|++|+++-.|+...+..--. ..++ +++ +-+|..+|.|.|..|+.+||+....
T Consensus 248 TFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~ 323 (442)
T KOG3866|consen 248 TFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTD 323 (442)
T ss_pred hheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhh
Confidence 3566679999999999999988774211 1111 111 4478999999999999999998653
No 122
>KOG0035|consensus
Probab=90.21 E-value=2.4 Score=42.70 Aligned_cols=102 Identities=15% Similarity=0.018 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhh----HHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhcc
Q psy3180 96 KNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMR----DLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDE 171 (346)
Q Consensus 96 ~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~----~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~ 171 (346)
+.....++..|+.++....|.++..++..+|-..+..... ..+|..++...|.+..|.|++.+|...+......
T Consensus 743 Q~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~-- 820 (890)
T KOG0035|consen 743 QYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYED-- 820 (890)
T ss_pred HHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhh--
Confidence 4567889999999999999999999999999876553222 3456667777888888999999999999765444
Q ss_pred cccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHh
Q psy3180 172 DQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS 206 (346)
Q Consensus 172 ~~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~ 206 (346)
.....++..+|+.+-++.. +|..+|+..
T Consensus 821 ------l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 821 ------LDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred ------hcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 1122334567777766655 788888887
No 123
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=90.10 E-value=0.2 Score=36.75 Aligned_cols=31 Identities=13% Similarity=0.374 Sum_probs=24.0
Q ss_pred cccchHHHhhhhcCCCCCCcccHHHHHHHHh
Q psy3180 44 YIHNDVESQWRTHNPEDKEKITWDEYREKVY 74 (346)
Q Consensus 44 ~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 74 (346)
+++++++.+|..+..|..|.|.|.||+..|.
T Consensus 4 LtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs 34 (118)
T PF08976_consen 4 LTDEQFDRLWNEMPVNAKGRLKYQEFLSKFS 34 (118)
T ss_dssp --HHHHHHHHTTS-B-TTS-EEHHHHHHHT-
T ss_pred ccHHHhhhhhhhCcCCccCCEeHHHHHHHcc
Confidence 5788999999999999999999999999875
No 124
>KOG2243|consensus
Probab=89.52 E-value=0.66 Score=48.05 Aligned_cols=63 Identities=10% Similarity=0.249 Sum_probs=54.7
Q ss_pred HHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCC
Q psy3180 186 RRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGD 250 (346)
Q Consensus 186 ~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~ 250 (346)
..|+.||+++.|.|+..+|..++... ...++.++.-++.-...+.+...+|++|+..+.....
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~--k~ytqse~dfllscae~dend~~~y~dfv~rfhepak 4123 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGH--KHYTQSEIDFLLSCAEADENDMFDYEDFVDRFHEPAK 4123 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhcc--ccchhHHHHHHHHhhccCccccccHHHHHHHhcCchh
Confidence 36889999999999999999999875 4688889999999999999999999999997765443
No 125
>KOG4578|consensus
Probab=89.26 E-value=0.18 Score=43.99 Aligned_cols=65 Identities=18% Similarity=0.187 Sum_probs=50.1
Q ss_pred HHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhh
Q psy3180 102 DKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAE 166 (346)
Q Consensus 102 l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 166 (346)
+...|..+|.|.++.|...|++.+-.......-...-...+++.-|.|+|.+||++|+...+...
T Consensus 335 v~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~ 399 (421)
T KOG4578|consen 335 VHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGVE 399 (421)
T ss_pred eeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhccc
Confidence 45689999999999999999655443222223345667788999999999999999999887543
No 126
>KOG0035|consensus
Probab=88.72 E-value=1.1 Score=44.89 Aligned_cols=102 Identities=15% Similarity=0.063 Sum_probs=77.0
Q ss_pred chhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhccccc-----chHHHhhhhcCCCCCCcccHHHHHHHHhccchhh
Q psy3180 6 DKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIH-----NDVESQWRTHNPEDKEKITWDEYREKVYGFLDEV 80 (346)
Q Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~-----~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~ 80 (346)
.+...+.|+..|+.+|....|..+..+|.++|..+|..... .++.+++...|.+.-|.|++.+|...+.......
T Consensus 742 sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~l 821 (890)
T KOG0035|consen 742 SQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYEDL 821 (890)
T ss_pred hHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhhh
Confidence 34566789999999999999999999999999999887654 2345567777888889999999999886543322
Q ss_pred hhhhhhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHh
Q psy3180 81 DAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFAS 124 (346)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~ 124 (346)
....++..+|...-++.. +|..+|+..
T Consensus 822 ----------------~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 822 ----------------DTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred ----------------cHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 223445666766666555 788888776
No 127
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=88.47 E-value=0.59 Score=31.26 Aligned_cols=58 Identities=12% Similarity=0.217 Sum_probs=36.2
Q ss_pred HHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCC---CCCCcccHHHHHHHh
Q psy3180 183 RDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDK---DKDGKVSLREYIGDM 245 (346)
Q Consensus 183 ~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~---~~dg~i~~~eF~~~l 245 (346)
.+..+|+.+ .++.++||..+|++.|.+.. . +-.+..|-...+. ...|.++|..|+..+
T Consensus 7 qv~~aFr~l-A~~KpyVT~~dLr~~l~pe~---a-ey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l 67 (69)
T PF08726_consen 7 QVEEAFRAL-AGGKPYVTEEDLRRSLTPEQ---A-EYCISRMPPYEGPDGDAIPGAYDYESFTNSL 67 (69)
T ss_dssp HHHHHHHHH-CTSSSCEEHHHHHHHS-CCC---H-HHHHCCSEC--SSS----TTEEECHHHHCCC
T ss_pred HHHHHHHHH-HcCCCcccHHHHHHHcCcHH---H-HHHHHHCcccCCCCcCCCCCCcCHHHHHHHH
Confidence 458899999 77889999999999988753 1 2222222212222 123679999998654
No 128
>PLN02952 phosphoinositide phospholipase C
Probab=88.08 E-value=2.3 Score=41.27 Aligned_cols=90 Identities=8% Similarity=0.126 Sum_probs=59.8
Q ss_pred CCCcccHHHHHHHHHhhhhhcccccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccc-cCcHHHHHHHHhhh
Q psy3180 150 KDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHPEETA-HMRDLVVVETMEDI 228 (346)
Q Consensus 150 ~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~-~~~~~~~~~l~~~~ 228 (346)
+.|.++|.+|..+...+........ ..+..+|..+-.++ +.++.++|..+|...... ..+...+..++..+
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r-------~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~ 84 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPP-------DDVKDVFCKFSVGG-GHMGADQLRRFLVLHQDELDCTLAEAQRIVEEV 84 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCCh-------HHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHH
Confidence 3589999999988876643311112 23478888886544 689999999999875432 35555566665432
Q ss_pred C-------CCCCCcccHHHHHHHhhc
Q psy3180 229 D-------KDKDGKVSLREYIGDMFR 247 (346)
Q Consensus 229 d-------~~~dg~i~~~eF~~~l~~ 247 (346)
- ....+.++++.|..+|..
T Consensus 85 ~~~~~~~~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 85 INRRHHVTRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred HhhccccccccccCcCHHHHHHHHcC
Confidence 1 112345899999998864
No 129
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=86.34 E-value=2.6 Score=29.88 Aligned_cols=63 Identities=21% Similarity=0.298 Sum_probs=41.9
Q ss_pred hhhhhhhhHhhccCCCCccCHHHHHHHHHHh-------hcc----cccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 10 KDKDGLIVDKIDKDKDGFVSKEELKEWIQFT-------QKR----YIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 10 ~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~-------~~~----~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
.++++.+|+.+ .|.+|.++..-|...|... +.. ..+.-++..|... .....|+-.+|+.++..
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHh
Confidence 36889999999 8999999999999998853 111 1334456677776 36678999999998765
No 130
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=84.91 E-value=1.5 Score=34.62 Aligned_cols=67 Identities=12% Similarity=0.146 Sum_probs=50.3
Q ss_pred HHHHHhhhhhcCCCCCCCCHHHHHhhcCCCC---CCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhhc
Q psy3180 263 NEKEQFAMYRDKNGDGFMDEEEVKNWILPPD---FDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFVG 330 (346)
Q Consensus 263 ~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~---~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~~ 330 (346)
.+-.+|-.| -..+...++..-|..++++++ ..++..+++.+|..+-..+..+|+|++|..+......
T Consensus 3 ~~F~~f~~f-G~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~ 72 (154)
T PF05517_consen 3 AVFKAFASF-GKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAE 72 (154)
T ss_dssp HHHHHHHCS-STSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHH
Confidence 344455555 466777799999999998886 3589999999999987777778999999998876543
No 131
>KOG3866|consensus
Probab=82.07 E-value=6.6 Score=34.30 Aligned_cols=95 Identities=20% Similarity=0.145 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHhhc-ccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhhhhccccc-----hHHHHHHHHHH
Q psy3180 29 SKEELKEWIQFTQK-RYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAELAKDEDQ-----GFSYKNMLNRD 102 (346)
Q Consensus 29 s~~E~~~~l~~~~~-~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l 102 (346)
|.+.++.+-..... ....-+.+++|...|.|+||.++-.|.-+.|...+..+ .++.+ ..--..++.--
T Consensus 225 SkdQLkEVWEE~DgLdpn~fdPKTFF~LHD~NsDGfldeqELEaLFtkELEKv------YdpkNeeDDM~EmeEErlRMR 298 (442)
T KOG3866|consen 225 SKDQLKEVWEESDGLDPNQFDPKTFFALHDLNSDGFLDEQELEALFTKELEKV------YDPKNEEDDMKEMEEERLRMR 298 (442)
T ss_pred cHHHHHHHHHHhcCCCcccCCcchheeeeccCCcccccHHHHHHHHHHHHHHh------cCCCCcchHHHHHHHHHHHHH
Confidence 55666655444322 22333568899999999999999999988775322110 11111 11111222333
Q ss_pred HHHHHHhccCCCCCCCHHHHHhhcCCc
Q psy3180 103 KRRWDVADIDGDRALTREEFASFLHPE 129 (346)
Q Consensus 103 ~~~F~~~D~~~~g~i~~~ef~~~l~~~ 129 (346)
..+.+.+|.|.+..|+..||...-...
T Consensus 299 EHVMk~vDtNqDRlvtleEFL~~t~~k 325 (442)
T KOG3866|consen 299 EHVMKQVDTNQDRLVTLEEFLNDTDNK 325 (442)
T ss_pred HHHHHhcccchhhhhhHHHHHhhhhhc
Confidence 457788888888888888887766544
No 132
>KOG0042|consensus
Probab=81.54 E-value=1.6 Score=41.42 Aligned_cols=77 Identities=12% Similarity=0.148 Sum_probs=66.3
Q ss_pred hhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhhcccccch
Q psy3180 259 DWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFVGSQATDF 336 (346)
Q Consensus 259 ~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~~~~~~~~ 336 (346)
.-+...+..|..+ |.|+.|+++.+...++|+..+...+.+.+..+....|.+..|.+...||.+.+.-.+......-
T Consensus 590 ~~~~~~~~rf~~l-D~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~g~~~~~ 666 (680)
T KOG0042|consen 590 EDFLRRKTRFAFL-DADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKNGCTEGS 666 (680)
T ss_pred HHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhcCChHHH
Confidence 3456677889997 9999999999999999999988999999999999999999999999999997776665554443
No 133
>KOG1265|consensus
Probab=77.07 E-value=47 Score=33.77 Aligned_cols=127 Identities=9% Similarity=0.194 Sum_probs=86.9
Q ss_pred HhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhh--hccCCCCc-----ccHHHHHHHHHhhhhhcccccchHHHH
Q psy3180 108 VADIDGDRALTREEFASFLHPEETAHMRDLVVVETMED--IDKDKDGK-----VSLREYIEVDAAELAKDEDQGFSYKNM 180 (346)
Q Consensus 108 ~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~--~d~~~dg~-----i~~~eF~~~~~~~~~~~~~~~~~~~~~ 180 (346)
.+-.+..|+|....+.+.+..-.. +..++..+.. +-.++... .+++-|..++..++..
T Consensus 156 kmqvn~~grip~knI~k~F~~~k~----~KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~klcpR----------- 220 (1189)
T KOG1265|consen 156 KMQVNFEGRIPVKNIIKTFSADKK----EKRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNKLCPR----------- 220 (1189)
T ss_pred hhcccccccccHHHHHHHhhcCCc----hhHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHhcCCc-----------
Confidence 345677888888888777764322 1233333332 22223223 4556666666666554
Q ss_pred HHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCc---------cccCcHHHHHHHHhhhCCC----CCCcccHHHHHHHhhc
Q psy3180 181 LNRDKRRWDVADIDGDRALTREEFASFLHPEE---------TAHMRDLVVVETMEDIDKD----KDGKVSLREYIGDMFR 247 (346)
Q Consensus 181 ~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~---------~~~~~~~~~~~l~~~~d~~----~dg~i~~~eF~~~l~~ 247 (346)
..+..+|..+..+...++|.++|..+|+... .+.+.+..+..++..+..+ ..|.++-+-|+.++..
T Consensus 221 -~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 221 -PEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred -hhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhC
Confidence 2347899999998889999999999998522 3466788899999998766 5689999999998887
Q ss_pred CCC
Q psy3180 248 GGD 250 (346)
Q Consensus 248 ~~~ 250 (346)
...
T Consensus 300 dEn 302 (1189)
T KOG1265|consen 300 DEN 302 (1189)
T ss_pred Ccc
Confidence 555
No 134
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=77.00 E-value=15 Score=26.05 Aligned_cols=64 Identities=8% Similarity=0.200 Sum_probs=40.4
Q ss_pred HHHHHHHHHhcCCCCCCcCHHHHHhhcCcC-------cc---ccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcC
Q psy3180 182 NRDKRRWDVADIDGDRALTREEFASFLHPE-------ET---AHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRG 248 (346)
Q Consensus 182 ~~~~~~F~~~D~~~~G~is~~e~~~~l~~~-------~~---~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~ 248 (346)
.+++.+|+.+ .|++|.++...|..+|... +. -.-.+..+...|... ...-.|+.++|+..+...
T Consensus 3 dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 3 DKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMSE 76 (90)
T ss_dssp HHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT-
T ss_pred HHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHhC
Confidence 4568899988 7889999999999988731 10 011455577777766 245669999999999875
No 135
>PLN02952 phosphoinositide phospholipase C
Probab=74.97 E-value=12 Score=36.48 Aligned_cols=56 Identities=7% Similarity=-0.015 Sum_probs=43.2
Q ss_pred CCCCCCHHHHHhhcCCccc-hhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhh
Q psy3180 113 GDRALTREEFASFLHPEET-AHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAK 169 (346)
Q Consensus 113 ~~g~i~~~ef~~~l~~~~~-~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~ 169 (346)
+.|.++..+|..+.+.... ...++.++..+|..+-.++ +.++.++|..|+......
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~Q~e 69 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLHQDE 69 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCC
Confidence 4689999999877775432 1336789999999986544 689999999999876654
No 136
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=74.77 E-value=8.2 Score=30.52 Aligned_cols=65 Identities=11% Similarity=0.156 Sum_probs=46.8
Q ss_pred HHHHhccCCCCCCCHHHHHhhcCCcc--chhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhh
Q psy3180 105 RWDVADIDGDRALTREEFASFLHPEE--TAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAK 169 (346)
Q Consensus 105 ~F~~~D~~~~g~i~~~ef~~~l~~~~--~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~ 169 (346)
.|..+-..+...++...|.++++-.. ...++...+.-+|..+-..+...|+|++|+..+..+...
T Consensus 7 ~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~~ 73 (154)
T PF05517_consen 7 AFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAEK 73 (154)
T ss_dssp HHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHHH
T ss_pred HHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHH
Confidence 44444466777899999999888332 224788899999999877777789999999999766555
No 137
>KOG1265|consensus
Probab=73.41 E-value=21 Score=36.10 Aligned_cols=67 Identities=12% Similarity=0.155 Sum_probs=55.9
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHhhcC---------CccchhhhHHHHHHHHhhhccC----CCCcccHHHHHHHHHhh
Q psy3180 100 NRDKRRWDVADIDGDRALTREEFASFLH---------PEETAHMRDLVVVETMEDIDKD----KDGKVSLREYIEVDAAE 166 (346)
Q Consensus 100 ~~l~~~F~~~D~~~~g~i~~~ef~~~l~---------~~~~~~~~~~~~~~~~~~~d~~----~dg~i~~~eF~~~~~~~ 166 (346)
.++.++|..+-.++.-+++..+|..+|+ ....|...+..+..++..+..| ..|.++-+-|+.++..-
T Consensus 221 ~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~gd 300 (1189)
T KOG1265|consen 221 PEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMGD 300 (1189)
T ss_pred hhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhCC
Confidence 4578999999999999999999999998 2234566788899999998877 46899999999988653
No 138
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=72.83 E-value=6.7 Score=19.42 Aligned_cols=16 Identities=31% Similarity=0.337 Sum_probs=9.6
Q ss_pred ccCCCCccCHHHHHHH
Q psy3180 21 DKDKDGFVSKEELKEW 36 (346)
Q Consensus 21 D~d~~G~is~~E~~~~ 36 (346)
|.|+||.|+.-++...
T Consensus 1 DvN~DG~vna~D~~~l 16 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALL 16 (21)
T ss_dssp -TTSSSSSSHHHHHHH
T ss_pred CCCCCCcCCHHHHHHH
Confidence 5667777776666533
No 139
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=71.66 E-value=25 Score=27.19 Aligned_cols=59 Identities=12% Similarity=0.213 Sum_probs=34.5
Q ss_pred CCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCC-------CCcccHHHHHHHHhccchhhhhhhh
Q psy3180 25 DGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPED-------KEKITWDEYREKVYGFLDEVDAAEL 85 (346)
Q Consensus 25 ~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~-------dg~i~~~EF~~~~~~~~~~~~~~~~ 85 (346)
=+.||+.||...-..... +...++.+++.+..+| ++.|+|+-|..++..++...-+.++
T Consensus 5 ~~~lsp~eF~qLq~y~ey--s~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d~P~~l 70 (138)
T PF14513_consen 5 WVSLSPEEFAQLQKYSEY--STKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVDLPEDL 70 (138)
T ss_dssp -S-S-HHHHHHHHHHHHH------HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S--HHH
T ss_pred eeccCHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCCCCHHH
Confidence 478999999977665533 4456777776664433 4689999999999988876554444
No 140
>KOG4347|consensus
Probab=70.82 E-value=4.2 Score=39.23 Aligned_cols=60 Identities=10% Similarity=0.166 Sum_probs=50.6
Q ss_pred chhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHH
Q psy3180 9 DKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEY 69 (346)
Q Consensus 9 ~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF 69 (346)
..--+.++|..+|.+++|.|+..++...|..+......+.+.-+++.+|.+++ ...-+|-
T Consensus 553 s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 553 SLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 33446889999999999999999999999998877666778889999999998 7776665
No 141
>KOG4004|consensus
Probab=65.43 E-value=4.5 Score=32.89 Aligned_cols=58 Identities=22% Similarity=0.223 Sum_probs=45.6
Q ss_pred HHHHhcC-CCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhc
Q psy3180 187 RWDVADI-DGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFR 247 (346)
Q Consensus 187 ~F~~~D~-~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~ 247 (346)
.|-.+|. ..+|++|-.|+..+-.++ .+.+..+..++...|.|+||.|+..||...+.-
T Consensus 192 qf~qld~~p~d~~~sh~el~pl~ap~---ipme~c~~~f~e~cd~~nd~~ial~ew~~c~gi 250 (259)
T KOG4004|consen 192 QFGQLDQHPIDGYLSHTELAPLRAPL---IPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 250 (259)
T ss_pred eeccccCCCccccccccccccccCCc---ccHHhhchhhhhcccCCCCCceeHHHhhcccCc
Confidence 3445664 578999999998876664 245567889999999999999999999887654
No 142
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=64.60 E-value=20 Score=25.81 Aligned_cols=65 Identities=15% Similarity=0.201 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhcc---CCCCcccHHHHHHHHHhhhhh
Q psy3180 99 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDK---DKDGKVSLREYIEVDAAELAK 169 (346)
Q Consensus 99 ~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~---~~dg~i~~~eF~~~~~~~~~~ 169 (346)
...+++-|..+-. +|+|+...|..|+..... .+...++|..+-. -....|+.+|...+...+..+
T Consensus 29 W~~VE~RFd~La~--dG~L~rs~Fg~CIGM~dS----keFA~eLFdALaRrr~i~~~~I~k~eL~efW~qisD~ 96 (100)
T PF08414_consen 29 WKEVEKRFDKLAK--DGLLPRSDFGECIGMKDS----KEFAGELFDALARRRGIKGDSITKDELKEFWEQISDQ 96 (100)
T ss_dssp HHHHHHHHHHH-B--TTBEEGGGHHHHHT--S-----HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHHH--
T ss_pred HHHHHHHHHHhCc--CCcccHHHHHHhcCCccc----HHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHhhcc
Confidence 5667888888888 899999999999985433 3344444444321 124679999988887665544
No 143
>KOG2871|consensus
Probab=59.54 E-value=10 Score=34.10 Aligned_cols=71 Identities=11% Similarity=0.119 Sum_probs=52.0
Q ss_pred cchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHh-hhhcCCCCCCcccHHHHHHHHhc
Q psy3180 5 VDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQ-WRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 5 ~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~-~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
.+..-.++++++|+..|+.++|+||..-++.++..++..+++.+.-.+ -+.+|+..-|.|-...|..-+..
T Consensus 303 ~~~~~s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~~iil~~d~lg~~~p 374 (449)
T KOG2871|consen 303 VPENPSEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESLGIILLEDFLGEFFP 374 (449)
T ss_pred CCCCCCHHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhcceEEeccccccccC
Confidence 344557889999999999999999999999999988855554444333 34567777777766666655443
No 144
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=59.09 E-value=24 Score=25.39 Aligned_cols=53 Identities=11% Similarity=0.083 Sum_probs=39.6
Q ss_pred CCccCHHHHHHHHHHhhc--ccccchHHHhhhhcCCCCCCcccHHHHHHHHhccc
Q psy3180 25 DGFVSKEELKEWIQFTQK--RYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFL 77 (346)
Q Consensus 25 ~G~is~~E~~~~l~~~~~--~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~ 77 (346)
||.|+..|...+-..+.. .+++.+...++..+........++.+|...+....
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHF 67 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhC
Confidence 899999999877665433 45667778888877776777788999988776543
No 145
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=58.96 E-value=4.5 Score=27.13 Aligned_cols=38 Identities=16% Similarity=0.215 Sum_probs=30.3
Q ss_pred CCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhhc
Q psy3180 293 DFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFVG 330 (346)
Q Consensus 293 ~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~~ 330 (346)
...+++..+..+.+.|+.-..++|+-+||++.....++
T Consensus 19 ~~~l~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVG 56 (70)
T PF12174_consen 19 SKHLPPSKMDLLQKHYEEFKKKKISREEFVRKLRQIVG 56 (70)
T ss_pred HHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 44577777888888888788999999999998777654
No 146
>KOG1954|consensus
Probab=54.84 E-value=11 Score=34.20 Aligned_cols=48 Identities=17% Similarity=0.170 Sum_probs=38.4
Q ss_pred CCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHH
Q psy3180 113 GDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVD 163 (346)
Q Consensus 113 ~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 163 (346)
-+|+||-..-+..+... .++...+..+|+..|.++||.++-+||.-.-
T Consensus 456 ~~gk~sg~~ak~~mv~s---klpnsvlgkiwklad~d~dg~ld~eefala~ 503 (532)
T KOG1954|consen 456 VNGKLSGRNAKKEMVKS---KLPNSVLGKIWKLADIDKDGMLDDEEFALAN 503 (532)
T ss_pred cCceeccchhHHHHHhc---cCchhHHHhhhhhhcCCcccCcCHHHHHHHH
Confidence 36777777777666543 5567889999999999999999999998544
No 147
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=52.83 E-value=49 Score=23.77 Aligned_cols=84 Identities=17% Similarity=0.134 Sum_probs=53.5
Q ss_pred CCCCCCHHHHHhhcCCccc-hhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhcccccchHHHHHHHHHHHHHHh
Q psy3180 113 GDRALTREEFASFLHPEET-AHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVA 191 (346)
Q Consensus 113 ~~g~i~~~ef~~~l~~~~~-~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~ 191 (346)
-+|.++..|...+-..+.. ..+++.+...++..+........++.+|..-+...... .....-+..+|+..
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~r~~~l~~L~~vA 83 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHFDY--------EERLELVEALWEVA 83 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCH--------HHHHHHHHHHHHHH
Confidence 3788898887666553222 24567777888887777777778899998877654422 12223345666665
Q ss_pred cCCCCCCcCHHHHHh
Q psy3180 192 DIDGDRALTREEFAS 206 (346)
Q Consensus 192 D~~~~G~is~~e~~~ 206 (346)
-. ||.++..|-.-
T Consensus 84 ~A--DG~~~~~E~~~ 96 (104)
T cd07313 84 YA--DGELDEYEEHL 96 (104)
T ss_pred Hh--cCCCCHHHHHH
Confidence 44 46777777543
No 148
>KOG4004|consensus
Probab=51.11 E-value=8.6 Score=31.31 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=39.1
Q ss_pred hcCCC-CCCcccHHHHHHHHhccchhhhhhhhhccccchHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHhhcCC
Q psy3180 55 THNPE-DKEKITWDEYREKVYGFLDEVDAAELAKDEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHP 128 (346)
Q Consensus 55 ~~D~~-~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~ 128 (346)
.+|.. -||+||-.|.+..-... ..+...+.+.|.-.|.|++|+|+..|+..++.-
T Consensus 195 qld~~p~d~~~sh~el~pl~ap~-------------------ipme~c~~~f~e~cd~~nd~~ial~ew~~c~gi 250 (259)
T KOG4004|consen 195 QLDQHPIDGYLSHTELAPLRAPL-------------------IPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 250 (259)
T ss_pred cccCCCccccccccccccccCCc-------------------ccHHhhchhhhhcccCCCCCceeHHHhhcccCc
Confidence 34433 36777777776543322 233566788899999999999999999988763
No 149
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=49.91 E-value=35 Score=26.09 Aligned_cols=75 Identities=19% Similarity=0.156 Sum_probs=48.4
Q ss_pred CCCccCHHHHHHHHHHh--hcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhhhhhhhccccchHHHHHHHHH
Q psy3180 24 KDGFVSKEELKEWIQFT--QKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAELAKDEDQGFSYKNMLNR 101 (346)
Q Consensus 24 ~~G~is~~E~~~~l~~~--~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (346)
-||.|+..|...+...+ ...+++.+...++..++.-....+++.+++..+...+... ....-
T Consensus 36 aDG~v~~~E~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------------~r~~l 99 (140)
T PF05099_consen 36 ADGEVDPEEIEAIRQLLAERFGLSPEEAEELIELADELKQEPIDLEELLRELRDSLSPE----------------EREDL 99 (140)
T ss_dssp TTSS--CHHHHHHHHHHHHCGCGSCHHHHHHHHHHCHHHHHCCHHHHHHHHHCTS--HH----------------HHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhchH----------------HHHHH
Confidence 37999999999777766 2334566777777777766666788888887766543322 22345
Q ss_pred HHHHHHHhccCCC
Q psy3180 102 DKRRWDVADIDGD 114 (346)
Q Consensus 102 l~~~F~~~D~~~~ 114 (346)
+..++...-.||.
T Consensus 100 l~~l~~ia~ADG~ 112 (140)
T PF05099_consen 100 LRMLIAIAYADGE 112 (140)
T ss_dssp HHHHHHHCTCTTC
T ss_pred HHHHHHHHhcCCC
Confidence 6777777777664
No 150
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=48.99 E-value=17 Score=25.36 Aligned_cols=34 Identities=6% Similarity=0.073 Sum_probs=30.0
Q ss_pred CCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccC
Q psy3180 278 GFMDEEEVKNWILPPDFDHSDAEARHLIYESDSD 311 (346)
Q Consensus 278 G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~ 311 (346)
..||.+||.++-+..++++|..+++.+...+-.+
T Consensus 13 n~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~k 46 (85)
T PF11116_consen 13 NNITAKELLKYSKQYNISITKKQAEQIANILRGK 46 (85)
T ss_pred hcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcC
Confidence 4689999999999999999999999999888644
No 151
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=48.82 E-value=47 Score=25.25 Aligned_cols=67 Identities=12% Similarity=0.157 Sum_probs=42.4
Q ss_pred HHHHHHHHHhccCC--CCCCCHHHHHhhcCCcc----------c--h-----hhhHHHHHHHHhhhccCCCCcccHHHHH
Q psy3180 100 NRDKRRWDVADIDG--DRALTREEFASFLHPEE----------T--A-----HMRDLVVVETMEDIDKDKDGKVSLREYI 160 (346)
Q Consensus 100 ~~l~~~F~~~D~~~--~g~i~~~ef~~~l~~~~----------~--~-----~~~~~~~~~~~~~~d~~~dg~i~~~eF~ 160 (346)
..+.++|..+..+. +..|+..++..+|...- . + ...+..+.=++..+|+.+.|.|+.-.|.
T Consensus 41 ~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll~vyD~~rtG~I~vls~K 120 (127)
T PF09068_consen 41 SNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDLAVDLLLNWLLNVYDSQRTGKIRVLSFK 120 (127)
T ss_dssp HHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----HHHHHHHHHHHHHH-TT--SEEEHHHHH
T ss_pred HHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHHHHHHHHHHHHHHhCCCCCCeeehhHHH
Confidence 44567777776553 46799999888776221 1 1 2234446778889999999999999998
Q ss_pred HHHHhh
Q psy3180 161 EVDAAE 166 (346)
Q Consensus 161 ~~~~~~ 166 (346)
..+..+
T Consensus 121 vaL~~L 126 (127)
T PF09068_consen 121 VALITL 126 (127)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 877654
No 152
>KOG1954|consensus
Probab=47.58 E-value=24 Score=32.14 Aligned_cols=61 Identities=16% Similarity=0.173 Sum_probs=46.7
Q ss_pred HHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh
Q psy3180 264 EKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLF 328 (346)
Q Consensus 264 ~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~ 328 (346)
..++|-.. .--+|.||..--+..|... .+++..+-.+|+..|.|.||.++=+||.-+-++.
T Consensus 446 yde~fy~l--~p~~gk~sg~~ak~~mv~s--klpnsvlgkiwklad~d~dg~ld~eefala~hli 506 (532)
T KOG1954|consen 446 YDEIFYTL--SPVNGKLSGRNAKKEMVKS--KLPNSVLGKIWKLADIDKDGMLDDEEFALANHLI 506 (532)
T ss_pred hHhhhhcc--cccCceeccchhHHHHHhc--cCchhHHHhhhhhhcCCcccCcCHHHHHHHHHHH
Confidence 45566654 2347888887777766543 5777789999999999999999999998766653
No 153
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=46.97 E-value=47 Score=23.87 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=44.2
Q ss_pred CCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchhHHHHHHHhhhhhcC
Q psy3180 195 GDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYRDK 274 (346)
Q Consensus 195 ~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~~~~~~~~F~~~~D~ 274 (346)
-||.++..|...+-.-.......+.....+...+..-.....++.+|...+..... ........-+..++...
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~r~~~l~~l~~vA--- 84 (106)
T cd07316 12 ADGRVSEAEIQAARALMDQMGLDAEARREAIRLFNEGKESDFGLEEYARQFRRACG----GRPELLLQLLEFLFQIA--- 84 (106)
T ss_pred ccCCcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHH---
Confidence 36789988876654432222233333333333332222222677888887765321 01112233455566665
Q ss_pred CCCCCCCHHHHH
Q psy3180 275 NGDGFMDEEEVK 286 (346)
Q Consensus 275 d~~G~Is~~E~~ 286 (346)
--||.++..|-.
T Consensus 85 ~ADG~~~~~E~~ 96 (106)
T cd07316 85 YADGELSEAERE 96 (106)
T ss_pred HHcCCCCHHHHH
Confidence 346889988854
No 154
>KOG3449|consensus
Probab=44.46 E-value=83 Score=23.07 Aligned_cols=59 Identities=12% Similarity=0.095 Sum_probs=48.2
Q ss_pred HHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhh
Q psy3180 264 EKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLF 328 (346)
Q Consensus 264 ~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~ 328 (346)
+-.+|-.. ..-|+-..+..+++.+|...|....++.++.++..+ +|+ +.+|.+..=.--
T Consensus 3 yvaAYLL~-~lgGn~~psa~DikkIl~sVG~E~d~e~i~~visel----~GK-~i~ElIA~G~ek 61 (112)
T KOG3449|consen 3 YVAAYLLA-VLGGNASPSASDIKKILESVGAEIDDERINLVLSEL----KGK-DIEELIAAGREK 61 (112)
T ss_pred HHHHHHHH-HhcCCCCCCHHHHHHHHHHhCcccCHHHHHHHHHHh----cCC-CHHHHHHHhHHH
Confidence 34566776 888888999999999999999999999999999998 455 888888754443
No 155
>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.
Probab=42.51 E-value=31 Score=23.85 Aligned_cols=44 Identities=9% Similarity=0.169 Sum_probs=27.6
Q ss_pred HHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccC
Q psy3180 263 NEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSD 311 (346)
Q Consensus 263 ~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~ 311 (346)
.++.+...- ...|+||..|+..+|... .++++.++.++..+...
T Consensus 8 ~i~~Li~~g---K~~G~lT~~eI~~~L~~~--~~~~e~id~i~~~L~~~ 51 (82)
T PF03979_consen 8 AIKKLIEKG---KKKGYLTYDEINDALPED--DLDPEQIDEIYDTLEDE 51 (82)
T ss_dssp HHHHHHHHH---HHHSS-BHHHHHHH-S-S-----HHHHHHHHHHHHTT
T ss_pred HHHHHHHHH---hhcCcCCHHHHHHHcCcc--CCCHHHHHHHHHHHHHC
Confidence 444444443 346999999999999854 47888899998888643
No 156
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=42.09 E-value=61 Score=28.28 Aligned_cols=103 Identities=12% Similarity=0.086 Sum_probs=52.4
Q ss_pred CCCCcCHHHHHhhcCcCc-cccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchhHHH-HHHHhhhhh
Q psy3180 195 GDRALTREEFASFLHPEE-TAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKN-EKEQFAMYR 272 (346)
Q Consensus 195 ~~G~is~~e~~~~l~~~~-~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~~~~-~~~~F~~~~ 272 (346)
-||.+|..|+. +.+... .-.+++..-......+........++.+|+..+..... ..+..++. +...|...
T Consensus 68 ADG~Vse~Ei~-~~~~l~~~~~l~~~~r~~a~~lf~~~k~~~~~l~~~~~~~~~~~~-----~r~~l~~~lL~~l~~vA- 140 (267)
T PRK09430 68 AKGRVTEADIR-IASQLMDRMNLHGEARRAAQQAFREGKEPDFPLREKLRQFRSVCG-----GRFDLLRMFLEIQIQAA- 140 (267)
T ss_pred cCCCcCHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHH-
Confidence 47899999987 333321 11345554222333333333344888999987766443 11121111 23334443
Q ss_pred cCCCCCCCCHHHHHhhcCCCC--CCCcHHHHHHHHhh
Q psy3180 273 DKNGDGFMDEEEVKNWILPPD--FDHSDAEARHLIYE 307 (346)
Q Consensus 273 D~d~~G~Is~~E~~~~l~~~~--~~~~~~~~~~l~~~ 307 (346)
--||.++..| .++|..++ +.++..++..+...
T Consensus 141 --~ADG~l~~~E-~~~L~~Ia~~Lgis~~df~~~~~~ 174 (267)
T PRK09430 141 --FADGSLHPNE-RQVLYVIAEELGFSRFQFDQLLRM 174 (267)
T ss_pred --HhcCCCCHHH-HHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3458888888 44443332 44555555554443
No 157
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=41.49 E-value=1.2e+02 Score=21.19 Aligned_cols=49 Identities=8% Similarity=0.033 Sum_probs=37.4
Q ss_pred CccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHh
Q psy3180 26 GFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVY 74 (346)
Q Consensus 26 G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 74 (346)
-.||..||.++-...+.+++..+.+.+...+-.+.=...+-+|=...+.
T Consensus 13 n~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~k~inIfn~~~r~~llk 61 (85)
T PF11116_consen 13 NNITAKELLKYSKQYNISITKKQAEQIANILRGKNINIFNEQERKKLLK 61 (85)
T ss_pred hcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 3689999999999999999999999998888666544455444444443
No 158
>KOG2871|consensus
Probab=39.49 E-value=11 Score=33.97 Aligned_cols=71 Identities=8% Similarity=0.111 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhh
Q psy3180 99 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAK 169 (346)
Q Consensus 99 ~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~ 169 (346)
...++++|..+|+.++|+|+.+-+..++.....+.-.+..+.-+-..+|+..-|.|-...|+..+.+....
T Consensus 308 s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~~iil~~d~lg~~~p~tgs 378 (449)
T KOG2871|consen 308 SEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESLGIILLEDFLGEFFPTTGS 378 (449)
T ss_pred CHHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhcceEEeccccccccCcccc
Confidence 45689999999999999999999888887654323334445555556888888888888877766554433
No 159
>TIGR01639 P_fal_TIGR01639 Plasmodium falciparum uncharacterized domain TIGR01639. This model represents a conserved sequence region of about 60 amino acids found in over 40 predicted proteins of Plasmodium falciparum. It is not found elsewhere, including closely related species such as Plasmodium yoelii. No member of this family is characterized.
Probab=39.43 E-value=35 Score=22.14 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=28.1
Q ss_pred CCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhc
Q psy3180 277 DGFMDEEEVKNWILPPDFDHSDAEARHLIYESD 309 (346)
Q Consensus 277 ~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D 309 (346)
+-.+|.+|+...+..++..++..++-.+|...-
T Consensus 7 s~~lTeEEl~~~i~~L~~~~~~~dm~~IW~~v~ 39 (61)
T TIGR01639 7 SKKLSKEELNELINSLDEIPNRNDMLIIWNQVH 39 (61)
T ss_pred hHHccHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 456899999999999998899888988888774
No 160
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=37.25 E-value=59 Score=21.27 Aligned_cols=39 Identities=15% Similarity=0.313 Sum_probs=28.7
Q ss_pred hhhhcCCCCCCCCHHHHHhhcCC----------CCCCCcHHHHHHHHhhh
Q psy3180 269 AMYRDKNGDGFMDEEEVKNWILP----------PDFDHSDAEARHLIYES 308 (346)
Q Consensus 269 ~~~~D~d~~G~Is~~E~~~~l~~----------~~~~~~~~~~~~l~~~~ 308 (346)
+.| |...+.+||.++++++... .|..+|...+.+++..-
T Consensus 10 RLY-DT~~s~YiTL~di~~lV~~g~~~~V~D~ktgeDiT~~iL~QIi~e~ 58 (64)
T PF07879_consen 10 RLY-DTETSSYITLEDIAQLVREGEDFKVVDAKTGEDITRSILLQIILEE 58 (64)
T ss_pred ccc-cCCCceeEeHHHHHHHHHCCCeEEEEECCCCcccHHHHHHHHHHHH
Confidence 357 9999999999999999854 24566666666665544
No 161
>PLN02222 phosphoinositide phospholipase C 2
Probab=36.55 E-value=82 Score=30.86 Aligned_cols=65 Identities=8% Similarity=0.073 Sum_probs=47.1
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHhhcCCccc-hhhhHHHHHHHHhhhcc-CCCCcccHHHHHHHHHhh
Q psy3180 100 NRDKRRWDVADIDGDRALTREEFASFLHPEET-AHMRDLVVVETMEDIDK-DKDGKVSLREYIEVDAAE 166 (346)
Q Consensus 100 ~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~~~~~~~~d~-~~dg~i~~~eF~~~~~~~ 166 (346)
.++..+|..+-. ++.++.++|..+|..... ...+...+..++..+.. ...+.++++.|..++...
T Consensus 25 ~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s~ 91 (581)
T PLN02222 25 REIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFGD 91 (581)
T ss_pred HHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcCC
Confidence 467888888764 479999999999985433 23456667777776532 245679999999998653
No 162
>PLN02228 Phosphoinositide phospholipase C
Probab=35.07 E-value=99 Score=30.21 Aligned_cols=62 Identities=10% Similarity=0.073 Sum_probs=47.0
Q ss_pred HHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCC--CCCcHHHHHHHHhhhccC----CCCCcCHHHHHHHHh
Q psy3180 262 KNEKEQFAMYRDKNGDGFMDEEEVKNWILPPD--FDHSDAEARHLIYESDSD----ADQKLTKDEILAKYD 326 (346)
Q Consensus 262 ~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~--~~~~~~~~~~l~~~~D~~----~dG~i~~~eF~~~~~ 326 (346)
..+..+|..+ - +++.++.++|.+.|.... ...+.+.+..++..+... ..|.++.+.|..+..
T Consensus 24 ~ei~~if~~~-s--~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~ 91 (567)
T PLN02228 24 VSIKRLFEAY-S--RNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLF 91 (567)
T ss_pred HHHHHHHHHh-c--CCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhc
Confidence 4789999988 3 346899999999997763 234566788899888643 346799999998654
No 163
>PLN02222 phosphoinositide phospholipase C 2
Probab=35.05 E-value=86 Score=30.71 Aligned_cols=61 Identities=16% Similarity=0.311 Sum_probs=46.9
Q ss_pred HHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCC--CCcHHHHHHHHhhhcc-CCCCCcCHHHHHHHH
Q psy3180 262 KNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDF--DHSDAEARHLIYESDS-DADQKLTKDEILAKY 325 (346)
Q Consensus 262 ~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~--~~~~~~~~~l~~~~D~-~~dG~i~~~eF~~~~ 325 (346)
..+..+|..| -. ++.++.++|...|..... ..+.+.+..|+..+.. -..+.++++.|..+.
T Consensus 25 ~ei~~if~~~-~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL 88 (581)
T PLN02222 25 REIKTIFEKY-SE--NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYL 88 (581)
T ss_pred HHHHHHHHHh-cC--CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHh
Confidence 4789999998 43 579999999999977642 3577788889988642 246679999999855
No 164
>PLN02228 Phosphoinositide phospholipase C
Probab=34.98 E-value=1e+02 Score=30.15 Aligned_cols=65 Identities=14% Similarity=0.193 Sum_probs=46.7
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHhhcCCccc-hhhhHHHHHHHHhhhccC----CCCcccHHHHHHHHHhh
Q psy3180 100 NRDKRRWDVADIDGDRALTREEFASFLHPEET-AHMRDLVVVETMEDIDKD----KDGKVSLREYIEVDAAE 166 (346)
Q Consensus 100 ~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~-~~~~~~~~~~~~~~~d~~----~dg~i~~~eF~~~~~~~ 166 (346)
.++..+|..+-. ++.++.++|..+|..... .......+..++..+... ..|.++.+.|..++...
T Consensus 24 ~ei~~if~~~s~--~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s~ 93 (567)
T PLN02228 24 VSIKRLFEAYSR--NGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFSD 93 (567)
T ss_pred HHHHHHHHHhcC--CCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcCc
Confidence 457788887764 368999999999985432 224456677888777543 34679999999998654
No 165
>KOG1264|consensus
Probab=34.19 E-value=91 Score=31.61 Aligned_cols=144 Identities=13% Similarity=0.141 Sum_probs=83.0
Q ss_pred hhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHH-HhhhhcCCCCCCcccHHHHHHHHhccchhhhhhhhhccc
Q psy3180 11 DKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVE-SQWRTHNPEDKEKITWDEYREKVYGFLDEVDAAELAKDE 89 (346)
Q Consensus 11 ~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~-~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~ 89 (346)
.-|++.+-.+|.+.--.|+..+++..|......++..... .-|.. |.-..+-++|+.|.......+-+.+...
T Consensus 144 ~wlrk~~ysvd~~~~~~isard~k~~l~qvn~k~~~~kfl~e~~te-d~~~k~dlsf~~f~~ly~~lmfs~~~a~----- 217 (1267)
T KOG1264|consen 144 RWLRKQIYSVDQTRENSISARDLKTILPQVNFKVSSAKFLKEKFTE-DGARKDDLSFEQFHLLYKKLMFSQQKAI----- 217 (1267)
T ss_pred HHHHhhheeccchhhhheeHHhhhcccccceEEechHHHHHHHHhH-hhhccccccHHHHHHHHHHHhhccchhh-----
Confidence 3456666677877777799999988888776665443322 22222 3445678999999877665443322111
Q ss_pred cchHHHHHHHHHHHHHHH--HhccCCCCCCCHHHHHhhcCCccch--hhhHHHHHHHHhhhccC-----CCCcccHHHHH
Q psy3180 90 DQGFSYKNMLNRDKRRWD--VADIDGDRALTREEFASFLHPEETA--HMRDLVVVETMEDIDKD-----KDGKVSLREYI 160 (346)
Q Consensus 90 ~~~~~~~~~~~~l~~~F~--~~D~~~~g~i~~~ef~~~l~~~~~~--~~~~~~~~~~~~~~d~~-----~dg~i~~~eF~ 160 (346)
.......|- .-+...-..+...||.++|...... .-....+..++..|-.| ....++++||+
T Consensus 218 ---------l~e~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~~re~~EPyl~v~EFv 288 (1267)
T KOG1264|consen 218 ---------LLEFKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDTMRETAEPYLFVDEFV 288 (1267)
T ss_pred ---------hhcccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhhhhhccCcceeHHHHH
Confidence 111111111 1122223678999999998733221 11223455555554444 45679999999
Q ss_pred HHHHhhhhh
Q psy3180 161 EVDAAELAK 169 (346)
Q Consensus 161 ~~~~~~~~~ 169 (346)
.++....+.
T Consensus 289 ~fLFSreNs 297 (1267)
T KOG1264|consen 289 TFLFSRENS 297 (1267)
T ss_pred HHHhhcccc
Confidence 998765443
No 166
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=33.81 E-value=1.3e+02 Score=22.01 Aligned_cols=50 Identities=18% Similarity=0.365 Sum_probs=37.9
Q ss_pred hhhhcCCCCCCCCHHHHHhhcCC----------CCCCCcHHHHHHHHhhhccCCCCCcCHH
Q psy3180 269 AMYRDKNGDGFMDEEEVKNWILP----------PDFDHSDAEARHLIYESDSDADQKLTKD 319 (346)
Q Consensus 269 ~~~~D~d~~G~Is~~E~~~~l~~----------~~~~~~~~~~~~l~~~~D~~~dG~i~~~ 319 (346)
+.| |...+-+||.++++++... .|..+|...+.+++-.-...+..-++..
T Consensus 10 RLY-DT~tS~YITLedi~~lV~~g~~f~V~DakTgeDiT~~iL~QII~E~E~~g~~~lp~~ 69 (107)
T TIGR01848 10 RLY-DTETSSYVTLEDIRDLVREGREFQVVDSKSGDDLTRSILLQIIAEEESGGEPVLSTD 69 (107)
T ss_pred ccc-CCCccceeeHHHHHHHHHCCCeEEEEECCCCchhHHHHHHHHHHHHHhCCCCCCCHH
Confidence 357 9999999999999998844 3567788888888888776665555543
No 167
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=33.47 E-value=1.1e+02 Score=20.31 Aligned_cols=30 Identities=17% Similarity=0.289 Sum_probs=16.1
Q ss_pred CHHHHHhhcCCCCCCCcHHHHHHHHhhhcc
Q psy3180 281 DEEEVKNWILPPDFDHSDAEARHLIYESDS 310 (346)
Q Consensus 281 s~~E~~~~l~~~~~~~~~~~~~~l~~~~D~ 310 (346)
+-+++..++...|..+|..++..+++.=+.
T Consensus 15 ~d~~m~~if~l~~~~vs~~el~a~lrke~~ 44 (68)
T PF07308_consen 15 KDDDMIEIFALAGFEVSKAELSAWLRKEDE 44 (68)
T ss_pred ChHHHHHHHHHcCCccCHHHHHHHHCCCCC
Confidence 334555555555555555555555555443
No 168
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=33.28 E-value=3.3e+02 Score=23.75 Aligned_cols=109 Identities=9% Similarity=0.028 Sum_probs=59.2
Q ss_pred CCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhcccccchHHHHHHHHHHHHHHh
Q psy3180 112 DGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFSYKNMLNRDKRRWDVA 191 (346)
Q Consensus 112 ~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~ 191 (346)
.-+|.++..|...+-..+....++...-......|........++.+|+.-+...+.. .......-+...|...
T Consensus 67 kADG~Vse~Ei~~~~~l~~~~~l~~~~r~~a~~lf~~~k~~~~~l~~~~~~~~~~~~~------r~~l~~~lL~~l~~vA 140 (267)
T PRK09430 67 KAKGRVTEADIRIASQLMDRMNLHGEARRAAQQAFREGKEPDFPLREKLRQFRSVCGG------RFDLLRMFLEIQIQAA 140 (267)
T ss_pred hcCCCcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcc------cHHHHHHHHHHHHHHH
Confidence 3488899999873211111113344443333444444455558899999887665533 1111112224455554
Q ss_pred cCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhh
Q psy3180 192 DIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDI 228 (346)
Q Consensus 192 D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~ 228 (346)
=. ||.++..|-.-+........++..++..+...+
T Consensus 141 ~A--DG~l~~~E~~~L~~Ia~~Lgis~~df~~~~~~~ 175 (267)
T PRK09430 141 FA--DGSLHPNERQVLYVIAEELGFSRFQFDQLLRMM 175 (267)
T ss_pred Hh--cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 33 468999886655544333346666666666553
No 169
>PF02761 Cbl_N2: CBL proto-oncogene N-terminus, EF hand-like domain; InterPro: IPR014741 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the EF hand-like domain.; GO: 0005509 calcium ion binding; PDB: 3OP0_A 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B ....
Probab=32.68 E-value=88 Score=21.88 Aligned_cols=50 Identities=12% Similarity=-0.074 Sum_probs=38.1
Q ss_pred CccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhc
Q psy3180 26 GFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYG 75 (346)
Q Consensus 26 G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~ 75 (346)
-.|.-.+|+..|...-...+..+...+=.-+|...+|.||-=||.-+.+-
T Consensus 21 ~IVPW~~F~~~L~~~h~~~~~~~~~aLk~TiDlT~n~~iS~FeFdvFtRl 70 (85)
T PF02761_consen 21 TIVPWSEFRQALQKVHPISSGLEAMALKSTIDLTCNDYISNFEFDVFTRL 70 (85)
T ss_dssp SEEEHHHHHHHHHHHS--SSHHHHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred eEeeHHHHHHHHHHhcCCCchHHHHHHHHHHhcccCCccchhhhHHHHHH
Confidence 56999999999998655445566677888899999999999999876543
No 170
>PF11867 DUF3387: Domain of unknown function (DUF3387); InterPro: IPR021810 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is typically between 255 to 340 amino acids in length. This domain is found associated with PF04851 from PFAM, PF04313 from PFAM.
Probab=32.25 E-value=1.8e+02 Score=26.37 Aligned_cols=109 Identities=15% Similarity=0.099 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCC--CcccHHHHHHHhhcCCCCCC-----
Q psy3180 181 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKD--GKVSLREYIGDMFRGGDTDG----- 253 (346)
Q Consensus 181 ~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~d--g~i~~~eF~~~l~~~~~~~~----- 253 (346)
...++........+..| ++..++...++.+-...+....+..++...+.+.. ..++ ++|+..+........
T Consensus 100 f~~ir~~i~k~~~~~~~-~~~~~~~~~i~~Lid~~I~s~~v~~i~~~~~~~~~disild-~eFl~~v~~~~~k~~~~e~L 177 (335)
T PF11867_consen 100 FQAIRAAIRKLYSDDDG-PDIKEVEEKIRQLIDESIASEGVVDIFEAAGLKKPDISILD-DEFLEEVKKMKSKNLKAELL 177 (335)
T ss_pred HHHHHHHHHHhccCCCC-CCHHHHHHHHHHHHHHHHhcccchhHHhhcCCCCCChhhcC-HHHHHHHHhccCchHHHHHH
Confidence 34445555555555544 77777776666543223333344555555543222 1234 567665544332110
Q ss_pred -----------CCCCchhHHHHHHHhhhhhcCCCCCCCCHHHHHhhcCC
Q psy3180 254 -----------DEELPDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWILP 291 (346)
Q Consensus 254 -----------~~~~~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~ 291 (346)
....+...+.+...+...++.-++|.|+.+++..-|..
T Consensus 178 ~~~l~~~I~~~~~~N~~~~~~fsErLe~iI~~Y~~~~i~~~e~~~eLi~ 226 (335)
T PF11867_consen 178 EKLLRDEIKVRMKENPVRYKKFSERLEEIIEKYNNRSISSEEVIEELIK 226 (335)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 01111112344445555557778899999988777743
No 171
>KOG1264|consensus
Probab=30.59 E-value=2.4e+02 Score=28.82 Aligned_cols=147 Identities=14% Similarity=0.190 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhhcccccch
Q psy3180 97 NMLNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAKDEDQGFS 176 (346)
Q Consensus 97 ~~~~~l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~~~ 176 (346)
.....+++-+-.+|......|+..+++..|......-.....+.+-+.. |.-+.+.++|++|..+..++..... .
T Consensus 141 qI~~wlrk~~ysvd~~~~~~isard~k~~l~qvn~k~~~~kfl~e~~te-d~~~k~dlsf~~f~~ly~~lmfs~~---~- 215 (1267)
T KOG1264|consen 141 QIERWLRKQIYSVDQTRENSISARDLKTILPQVNFKVSSAKFLKEKFTE-DGARKDDLSFEQFHLLYKKLMFSQQ---K- 215 (1267)
T ss_pred HHHHHHHhhheeccchhhhheeHHhhhcccccceEEechHHHHHHHHhH-hhhccccccHHHHHHHHHHHhhccc---h-
Confidence 3356678888888988888899999999988554422222222222222 2235678999999998877655511 0
Q ss_pred HHHHHHHHHHHHHH--hcCCCCCCcCHHHHHhhcCcCccccCc--HHHHHHHHhhhCCC-----CCCcccHHHHHHHhhc
Q psy3180 177 YKNMLNRDKRRWDV--ADIDGDRALTREEFASFLHPEETAHMR--DLVVVETMEDIDKD-----KDGKVSLREYIGDMFR 247 (346)
Q Consensus 177 ~~~~~~~~~~~F~~--~D~~~~G~is~~e~~~~l~~~~~~~~~--~~~~~~l~~~~d~~-----~dg~i~~~eF~~~l~~ 247 (346)
.+.......|-. -+...--.++..+|.++|-......+. ...+..++..|-.| ..-.+.+.||+.++..
T Consensus 216 --a~l~e~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~~re~~EPyl~v~EFv~fLFS 293 (1267)
T KOG1264|consen 216 --AILLEFKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDTMRETAEPYLFVDEFVTFLFS 293 (1267)
T ss_pred --hhhhcccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhhhhhccCcceeHHHHHHHHhh
Confidence 001111111211 122223468999999999764332222 12455566665433 2235889999998876
Q ss_pred CCC
Q psy3180 248 GGD 250 (346)
Q Consensus 248 ~~~ 250 (346)
..+
T Consensus 294 reN 296 (1267)
T KOG1264|consen 294 REN 296 (1267)
T ss_pred ccc
Confidence 544
No 172
>PF12419 DUF3670: SNF2 Helicase protein ; InterPro: IPR022138 This domain family is found in bacteria, archaea and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF00271 from PFAM, PF00176 from PFAM. Most of the proteins in this family are annotated as SNF2 helicases but there is little accompanying literature to confirm this.
Probab=29.83 E-value=79 Score=24.46 Aligned_cols=49 Identities=22% Similarity=0.249 Sum_probs=39.5
Q ss_pred CCCCCCHHHHHhhcCCCC---------CCCcHHHHHHHHhhhccCCCCC-cCHHHHHHH
Q psy3180 276 GDGFMDEEEVKNWILPPD---------FDHSDAEARHLIYESDSDADQK-LTKDEILAK 324 (346)
Q Consensus 276 ~~G~Is~~E~~~~l~~~~---------~~~~~~~~~~l~~~~D~~~dG~-i~~~eF~~~ 324 (346)
|+-.||.+||.+++..-. +.+.++++..+.+.+.....+. ++..|-++.
T Consensus 80 Gd~~Ls~eEf~~L~~~~~~LV~~rg~WV~ld~~~l~~~~~~~~~~~~~~~lt~~e~Lr~ 138 (141)
T PF12419_consen 80 GDEELSEEEFEQLVEQKRPLVRFRGRWVELDPEELRRALAFLEKAPKGEKLTLAEALRA 138 (141)
T ss_pred CCEECCHHHHHHHHHcCCCeEEECCEEEEECHHHHHHHHHHHHhccccCCCCHHHHHHH
Confidence 567899999999996642 4568999999999999876664 999988763
No 173
>KOG4286|consensus
Probab=29.48 E-value=6.2e+02 Score=25.76 Aligned_cols=135 Identities=7% Similarity=0.081 Sum_probs=82.4
Q ss_pred HHHHHHhccCC-CCCCCHHHHHhhcCCc------------cchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhh
Q psy3180 103 KRRWDVADIDG-DRALTREEFASFLHPE------------ETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAK 169 (346)
Q Consensus 103 ~~~F~~~D~~~-~g~i~~~ef~~~l~~~------------~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~ 169 (346)
.++|..++-.+ .......+...+|... ..+..-+.-++=+|+.||..++|.|..-+|...+..+++.
T Consensus 423 l~if~~h~l~~~~e~m~~~~~i~~L~~~y~~l~e~~g~~v~v~l~vD~~lN~llNvyD~~R~g~irvls~ki~~i~lck~ 502 (966)
T KOG4286|consen 423 LDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHGNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKIGIISLCKA 502 (966)
T ss_pred HHHHHHhcccccCcCCCHHHHHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHhcccCCCcceEEeeehhhHHHHhcc
Confidence 34677776654 3445555555555411 0111123345778899999999999999999888888777
Q ss_pred cccccchHHHHHHHHHHHHHHhcCCCCCCcCHHHHHhhcCc-------------CccccCcHHHHHHHHhhhCCCCCCcc
Q psy3180 170 DEDQGFSYKNMLNRDKRRWDVADIDGDRALTREEFASFLHP-------------EETAHMRDLVVVETMEDIDKDKDGKV 236 (346)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~F~~~D~~~~G~is~~e~~~~l~~-------------~~~~~~~~~~~~~l~~~~d~~~dg~i 236 (346)
....+++.+|...-.+++-.+ ...|..+|.. .|...+. .-++..|... ++--.|
T Consensus 503 ---------~leek~~ylF~~vA~~~sq~~-q~~l~lLL~dliqipr~lGE~aAfGgsNve-psvrsCF~~v--~~~pei 569 (966)
T KOG4286|consen 503 ---------HLEDKYRYLFKQVASSTSQCD-QRRLGLLLHDLIQIPRQLGEVAAFGGSNIE-PSVRSCFQFV--NNKPEI 569 (966)
T ss_pred ---------hhHHHHHHHHHHHcCchhhHH-HHHHHHHHHHHHHHHHHHhHHHhhcCCCCC-hHHHHHHHhc--CCCCcc
Confidence 233455778888866665443 5555554432 2322222 2355666533 445569
Q ss_pred cHHHHHHHhhcCCC
Q psy3180 237 SLREYIGDMFRGGD 250 (346)
Q Consensus 237 ~~~eF~~~l~~~~~ 250 (346)
++..|+.++.....
T Consensus 570 ~~~~f~dw~~~epq 583 (966)
T KOG4286|consen 570 EAALFLDWMRLEPQ 583 (966)
T ss_pred hHHHHHHHhccCcc
Confidence 99999998866444
No 174
>PF08461 HTH_12: Ribonuclease R winged-helix domain; InterPro: IPR013668 This domain is found at the amino terminus of Ribonuclease R and a number of presumed transcriptional regulatory proteins from archaea.
Probab=29.35 E-value=57 Score=21.51 Aligned_cols=55 Identities=13% Similarity=0.064 Sum_probs=41.9
Q ss_pred CCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHHhhhhcccccchhhh
Q psy3180 276 GDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKYDLFVGSQATDFGEA 339 (346)
Q Consensus 276 ~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~~~~~~~~~~~~~~~ 339 (346)
.++.++..++.+.|...|..++.+.+......++.++ |+. -..+.+...++.|.+
T Consensus 10 ~~~P~g~~~l~~~L~~~g~~~se~avRrrLr~me~~G--------lt~-~~g~~G~~iT~~G~~ 64 (66)
T PF08461_consen 10 SDKPLGRKQLAEELKLRGEELSEEAVRRRLRAMERDG--------LTR-KVGRQGRIITEKGLD 64 (66)
T ss_pred cCCCCCHHHHHHHHHhcChhhhHHHHHHHHHHHHHCC--------Ccc-ccCCcccccCHHHHh
Confidence 4678999999999999999999999999999998765 222 123445666666654
No 175
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=28.19 E-value=84 Score=18.78 Aligned_cols=31 Identities=10% Similarity=0.126 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhcc--CCCCCCCHHHHHhhcCC
Q psy3180 98 MLNRDKRRWDVADI--DGDRALTREEFASFLHP 128 (346)
Q Consensus 98 ~~~~l~~~F~~~D~--~~~g~i~~~ef~~~l~~ 128 (346)
.+..+..+|..+.. .....++..||+..+..
T Consensus 4 ai~~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~ 36 (44)
T PF01023_consen 4 AIETIIDVFHKYAGKEGDKDTLSKKELKELLEK 36 (44)
T ss_dssp HHHHHHHHHHHHHTSSSSTTSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCeEcHHHHHHHHHH
Confidence 35567788888763 34578999999888874
No 176
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=27.88 E-value=2.7e+02 Score=21.11 Aligned_cols=75 Identities=11% Similarity=-0.027 Sum_probs=38.3
Q ss_pred hHHHHHHHHhhhccC--CCCcccHHHHHHHHHhhhhhccccc---chH------HHHHHHHHHHHHHhcCCCCCCcCHHH
Q psy3180 135 RDLVVVETMEDIDKD--KDGKVSLREYIEVDAAELAKDEDQG---FSY------KNMLNRDKRRWDVADIDGDRALTREE 203 (346)
Q Consensus 135 ~~~~~~~~~~~~d~~--~dg~i~~~eF~~~~~~~~~~~~~~~---~~~------~~~~~~~~~~F~~~D~~~~G~is~~e 203 (346)
+-..+.+.|+....+ .|..|+..+....+..+...-.... ..+ ....--+..+...||++.+|.|+.-.
T Consensus 39 ~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll~vyD~~rtG~I~vls 118 (127)
T PF09068_consen 39 DLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDLAVDLLLNWLLNVYDSQRTGKIRVLS 118 (127)
T ss_dssp -HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----HHHHHHHHHHHHHH-TT--SEEEHHH
T ss_pred eHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHHHHHHHHHHHHHHhCCCCCCeeehhH
Confidence 334444555554433 3566999998888876652211000 011 11222335667788888888888887
Q ss_pred HHhhcC
Q psy3180 204 FASFLH 209 (346)
Q Consensus 204 ~~~~l~ 209 (346)
++-++.
T Consensus 119 ~KvaL~ 124 (127)
T PF09068_consen 119 FKVALI 124 (127)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776553
No 177
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=26.92 E-value=43 Score=22.48 Aligned_cols=51 Identities=14% Similarity=0.128 Sum_probs=35.6
Q ss_pred CCccCHHHHHHHHHHhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccch
Q psy3180 25 DGFVSKEELKEWIQFTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLD 78 (346)
Q Consensus 25 ~G~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~ 78 (346)
+-+|+..-+- ..+...++..+...+-..|+.=..++|+-+||+..+.....
T Consensus 6 sp~~~F~~L~---~~l~~~l~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVG 56 (70)
T PF12174_consen 6 SPWMPFPMLF---SALSKHLPPSKMDLLQKHYEEFKKKKISREEFVRKLRQIVG 56 (70)
T ss_pred CCcccHHHHH---HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 3455644444 44444466677788878887778899999999998877654
No 178
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.51 E-value=1.8e+02 Score=22.53 Aligned_cols=65 Identities=17% Similarity=0.198 Sum_probs=47.0
Q ss_pred hhhHhhccCCCCccCHHHHHHHHH--HhhcccccchHHHhhhhcCCCCCCcccHHHHHHHHhccchhhh
Q psy3180 15 LIVDKIDKDKDGFVSKEELKEWIQ--FTQKRYIHNDVESQWRTHNPEDKEKITWDEYREKVYGFLDEVD 81 (346)
Q Consensus 15 ~~F~~~D~d~~G~is~~E~~~~l~--~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~~~~~~~~ 81 (346)
-+|+.+..| |.++..|-.++.. +....++..++..++...-.-+.-.+++..|...+...+...+
T Consensus 34 Llf~Vm~AD--G~v~~~E~~a~r~il~~~f~i~~~~l~ali~~~e~~~~Ea~d~y~fts~l~r~Ld~e~ 100 (148)
T COG4103 34 LLFHVMEAD--GTVSESEREAFRAILKENFGIDGEELDALIEAGEEAGYEAIDLYSFTSVLKRHLDEEQ 100 (148)
T ss_pred HHHHHHhcc--cCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCHHH
Confidence 677888776 6677777765544 3445677888899988887777788888888888776555433
No 179
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.24 E-value=1.5e+02 Score=22.93 Aligned_cols=55 Identities=16% Similarity=0.198 Sum_probs=37.3
Q ss_pred HHhhhhhcCCCCCCCCHHHHHhhcCCC--CCCCcHHHHHHHHhhhccCCCCCcCHHHHHH
Q psy3180 266 EQFAMYRDKNGDGFMDEEEVKNWILPP--DFDHSDAEARHLIYESDSDADQKLTKDEILA 323 (346)
Q Consensus 266 ~~F~~~~D~d~~G~Is~~E~~~~l~~~--~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~ 323 (346)
-.|... .-||.++..|......-+ .+.++++++..++.....-+.-.+++-.|..
T Consensus 34 Llf~Vm---~ADG~v~~~E~~a~r~il~~~f~i~~~~l~ali~~~e~~~~Ea~d~y~fts 90 (148)
T COG4103 34 LLFHVM---EADGTVSESEREAFRAILKENFGIDGEELDALIEAGEEAGYEAIDLYSFTS 90 (148)
T ss_pred HHHHHH---hcccCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 667776 556888888866544333 3677888888887777666666666666654
No 180
>PF04876 Tenui_NCP: Tenuivirus major non-capsid protein; InterPro: IPR006960 This entry contains the tenuivirus major non-capsid protein. Proteins accumulate in large amounts in tenuivirus infected cells. They are found in the inclusion bodies that are formed after infection [].
Probab=24.51 E-value=3.5e+02 Score=21.18 Aligned_cols=60 Identities=5% Similarity=0.066 Sum_probs=39.1
Q ss_pred HHHHHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCCCCcccHHHHHHHHHhhhhh
Q psy3180 102 DKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIEVDAAELAK 169 (346)
Q Consensus 102 l~~~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~ 169 (346)
+.-++...+....++.+.. . ..|......+..++..-+.+.++.|++..|..++...+..
T Consensus 56 ~~vayhhp~etd~~ftkVh------k--hmP~~~~s~Lehllg~~~~~~n~~i~~~~ff~~lQ~~lGd 115 (175)
T PF04876_consen 56 VYVAYHHPIETDPLFTKVH------K--HMPEFCHSFLEHLLGGEDDSTNGLIDIGKFFDILQPKLGD 115 (175)
T ss_pred HHHHhcCccccCcchHHHH------H--HhhHHHHHHHHHHhcCCcCCcccceeHHHHHHHHHHHhhh
Confidence 3445555566666554432 1 1234555666777766666778899999999999877665
No 181
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=23.71 E-value=1.4e+02 Score=21.60 Aligned_cols=64 Identities=11% Similarity=0.114 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhc
Q psy3180 181 LNRDKRRWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFR 247 (346)
Q Consensus 181 ~~~~~~~F~~~D~~~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~ 247 (346)
+..+..-|..+-. +|+|+...|...+.-........+....|-+.-... ...|+.+|...++.+
T Consensus 29 W~~VE~RFd~La~--dG~L~rs~Fg~CIGM~dSkeFA~eLFdALaRrr~i~-~~~I~k~eL~efW~q 92 (100)
T PF08414_consen 29 WKEVEKRFDKLAK--DGLLPRSDFGECIGMKDSKEFAGELFDALARRRGIK-GDSITKDELKEFWEQ 92 (100)
T ss_dssp HHHHHHHHHHH-B--TTBEEGGGHHHHHT--S-HHHHHHHHHHHHHHTT---SSEE-HHHHHHHHHH
T ss_pred HHHHHHHHHHhCc--CCcccHHHHHHhcCCcccHHHHHHHHHHHHHhcCCc-cCCcCHHHHHHHHHH
Confidence 4455677777766 889999999998875433344445555555554444 456888887765544
No 182
>cd07311 terB_like_1 tellurium resistance terB-like protein, subgroup 1. This family includes several uncharacterized bacterial proteins. The prototype of this CD is tellurite resistance protein from Nostoc punctiforme that belongs to COG3793. Its precise biological function and its mechanism responsible for tellurium resistance still remains rather poorly understood.
Probab=23.03 E-value=2.5e+02 Score=22.02 Aligned_cols=96 Identities=15% Similarity=0.043 Sum_probs=48.0
Q ss_pred CCCCcCHHHHHhhcCcCccccCcHHHHHHHHhhhCCCCCCcccHHHHHHHhhcCCCCCCCCCCchhHHHHHHHhhhhhcC
Q psy3180 195 GDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDKDGKVSLREYIGDMFRGGDTDGDEELPDWVKNEKEQFAMYRDK 274 (346)
Q Consensus 195 ~~G~is~~e~~~~l~~~~~~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~l~~~~~~~~~~~~~~~~~~~~~~F~~~~D~ 274 (346)
-||.++..|...+-..+....+++.....++.. ..+-.++...|.... ... .....+..++...
T Consensus 36 ADG~Vse~Ei~~~~~~m~~~~L~~e~~~~aie~---~~~~~L~~~~~~~~~--~~~--------~~~~ll~~~l~vA--- 99 (150)
T cd07311 36 GDGVISPEERDWAIGYAAARGGDADMVEELKEY---TADEDLEEVDFRSPN--IKS--------SRRALLYDAIQVC--- 99 (150)
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHh---CccccHHHHHHHHHh--cch--------hHHHHHHHHHHHH---
Confidence 478999999876555433234677777777766 222234333332222 110 0011222233322
Q ss_pred CCCCCCCHHHHHhhcCCCC--CCCcHHHHHHHHhh
Q psy3180 275 NGDGFMDEEEVKNWILPPD--FDHSDAEARHLIYE 307 (346)
Q Consensus 275 d~~G~Is~~E~~~~l~~~~--~~~~~~~~~~l~~~ 307 (346)
--||.++..| ++++..++ ..++..++..+.+.
T Consensus 100 ~ADG~l~~~E-~~lL~~iA~~LGis~~~~~~l~~~ 133 (150)
T cd07311 100 AADGELSPGE-VAAVRKAASLLGISEDEVQKLEEI 133 (150)
T ss_pred HcCCCCCHHH-HHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3368899888 44443332 34555555554443
No 183
>PF08671 SinI: Anti-repressor SinI; InterPro: IPR010981 The SinR repressor is part of a group of Sin (sporulation inhibition) proteins in Bacillus subtilis that regulate the commitment to sporulation in response to extreme adversity []. SinR is a tetrameric repressor protein that binds to the promoters of genes essential for entry into sporulation and prevents their transcription. This repression is overcome through the activity of SinI, which disrupts the SinR tetramer through the formation of a SinI-SinR heterodimer, thereby allowing sporulation to proceed. The SinR structure consists of two domains: a dimerisation domain stabilised by a hydrophobic core, and a DNA-binding domain that is identical to domains of the bacteriophage 434 CI and Cro proteins that regulate prophage induction. The dimerisation domain is a four-helical bundle formed from two helices from the C-terminal residues of SinR and two helices from the central residues of SinI. These regions in SinR and SinI are similar in both structure and sequence. The interaction of SinR monomers to form tetramers is weaker than between SinR and SinI, since SinI can effectively disrupt SinR tetramers. This entry represents the dimerisation domain in both SinI and SinR proteins.; GO: 0005488 binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1B0N_A 2YAL_A.
Probab=23.00 E-value=1.2e+02 Score=16.59 Aligned_cols=24 Identities=29% Similarity=0.675 Sum_probs=12.7
Q ss_pred chhHHHHHHHhhhhhcCCCCCCCCHHHHHhhc
Q psy3180 258 PDWVKNEKEQFAMYRDKNGDGFMDEEEVKNWI 289 (346)
Q Consensus 258 ~~~~~~~~~~F~~~~D~d~~G~Is~~E~~~~l 289 (346)
++|+.-++.|-.. | ||.+|+++.|
T Consensus 3 ~EW~~Li~eA~~~-------G-ls~eeir~FL 26 (30)
T PF08671_consen 3 EEWVELIKEAKES-------G-LSKEEIREFL 26 (30)
T ss_dssp HHHHHHHHHHHHT-------T---HHHHHHHH
T ss_pred HHHHHHHHHHHHc-------C-CCHHHHHHHH
Confidence 4565555555443 3 7777777765
No 184
>PF08100 Dimerisation: Dimerisation domain; InterPro: IPR012967 This domain is found at the N terminus of a variety of plant O-methyltransferases. It has been shown to mediate dimerisation of these proteins [].; GO: 0008168 methyltransferase activity, 0046983 protein dimerization activity; PDB: 1ZGJ_A 1ZG3_A 1ZHF_A 1ZGA_A 2QYO_A 1KYW_A 1KYZ_A 3REO_D 1FPX_A 1FP2_A ....
Probab=22.89 E-value=1.1e+02 Score=18.94 Aligned_cols=39 Identities=18% Similarity=0.091 Sum_probs=25.8
Q ss_pred HHHHhccCCCCCCCHHHHHhhcCCccchhhhHHHHHHHHhh
Q psy3180 105 RWDVADIDGDRALTREEFASFLHPEETAHMRDLVVVETMED 145 (346)
Q Consensus 105 ~F~~~D~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~ 145 (346)
+|..+...|++.+|..|+...+.. .+......+..+++.
T Consensus 11 I~dii~~~g~~~ls~~eia~~l~~--~~p~~~~~L~RimR~ 49 (51)
T PF08100_consen 11 IPDIIHNAGGGPLSLSEIAARLPT--SNPSAPPMLDRIMRL 49 (51)
T ss_dssp HHHHHHHHTTS-BEHHHHHHTSTC--T-TTHHHHHHHHHHH
T ss_pred cHHHHHHcCCCCCCHHHHHHHcCC--CCcchHHHHHHHHHH
Confidence 566666677899999999998884 223345566666653
No 185
>cd00086 homeodomain Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Probab=22.83 E-value=1.9e+02 Score=17.78 Aligned_cols=44 Identities=14% Similarity=0.094 Sum_probs=33.3
Q ss_pred ccchhchhhhhhhhHhhccCCCCccCHHHHHHHHHHhhcccccchHHHhhh
Q psy3180 4 IVDKIDKDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRYIHNDVESQWR 54 (346)
Q Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~ 54 (346)
..++...+.|...|.. +.+.+..+...+...++ ++..++...|.
T Consensus 6 ~~~~~~~~~Le~~f~~-----~~~P~~~~~~~la~~~~--l~~~qV~~WF~ 49 (59)
T cd00086 6 RFTPEQLEELEKEFEK-----NPYPSREEREELAKELG--LTERQVKIWFQ 49 (59)
T ss_pred cCCHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHC--cCHHHHHHHHH
Confidence 4566778888888888 77999999998888776 45566666554
No 186
>PLN02223 phosphoinositide phospholipase C
Probab=22.51 E-value=2.2e+02 Score=27.60 Aligned_cols=62 Identities=15% Similarity=-0.062 Sum_probs=45.2
Q ss_pred HHHHHHhhhhhcCCCCCCCCHHHHHhhc---CCC-C-CCCcHHHHHHHHhhhccC--------CCCCcCHHHHHHHH
Q psy3180 262 KNEKEQFAMYRDKNGDGFMDEEEVKNWI---LPP-D-FDHSDAEARHLIYESDSD--------ADQKLTKDEILAKY 325 (346)
Q Consensus 262 ~~~~~~F~~~~D~d~~G~Is~~E~~~~l---~~~-~-~~~~~~~~~~l~~~~D~~--------~dG~i~~~eF~~~~ 325 (346)
..++.+|..| ..++|.++.+.+.+.| ... | ...+.++++.++..+-.. ..+.++.+.|..+.
T Consensus 16 ~~v~~~f~~~--~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~~~L 90 (537)
T PLN02223 16 DLILNFFGNE--FHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLNEFL 90 (537)
T ss_pred HHHHHHHHHh--hcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHHHHh
Confidence 4789999998 4788999999999998 333 2 356667777777765322 22569999999843
No 187
>PF08044 DUF1707: Domain of unknown function (DUF1707); InterPro: IPR012551 This domain is found in a variety of actinomycetales proteins. All of the proteins containing this domain are hypothetical and probably membrane bound or associated. Currently, it is unclear to the function of this domain.
Probab=22.32 E-value=1.2e+02 Score=18.96 Aligned_cols=31 Identities=13% Similarity=0.281 Sum_probs=22.9
Q ss_pred CCCccCHHHHHHHHHHhhcccccchHHHhhh
Q psy3180 24 KDGFVSKEELKEWIQFTQKRYIHNDVESQWR 54 (346)
Q Consensus 24 ~~G~is~~E~~~~l~~~~~~~~~~~~~~~~~ 54 (346)
.+|.|+..||..-+...-...+..++..++.
T Consensus 20 a~GrL~~~Ef~~R~~~a~~A~t~~eL~~l~~ 50 (53)
T PF08044_consen 20 AEGRLSLDEFDERLDAAYAARTRGELDALFA 50 (53)
T ss_pred HCCCCCHHHHHHHHHHHHhcCcHHHHHHHHc
Confidence 4799999999988777666666666666654
No 188
>PLN02230 phosphoinositide phospholipase C 4
Probab=21.67 E-value=2.1e+02 Score=28.30 Aligned_cols=63 Identities=11% Similarity=0.092 Sum_probs=0.0
Q ss_pred hhhhhhhhHhhccCCCCccCHHHHHHHHHHhhccc---ccchHHHhhhhc-------CCCCCCcccHHHHHHHH
Q psy3180 10 KDKDGLIVDKIDKDKDGFVSKEELKEWIQFTQKRY---IHNDVESQWRTH-------NPEDKEKITWDEYREKV 73 (346)
Q Consensus 10 ~~~l~~~F~~~D~d~~G~is~~E~~~~l~~~~~~~---~~~~~~~~~~~~-------D~~~dg~i~~~EF~~~~ 73 (346)
...++.+|..+-.++ ++++.++|..+|....... +.++++.++..+ ..-+.+.++.+.|..++
T Consensus 28 ~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL 100 (598)
T PLN02230 28 VADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYL 100 (598)
T ss_pred cHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHH
No 189
>cd07176 terB tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.
Probab=21.56 E-value=1.5e+02 Score=21.20 Aligned_cols=17 Identities=24% Similarity=0.345 Sum_probs=14.5
Q ss_pred CCccCHHHHHHHHHHhh
Q psy3180 25 DGFVSKEELKEWIQFTQ 41 (346)
Q Consensus 25 ~G~is~~E~~~~l~~~~ 41 (346)
||.|+..|...+...+.
T Consensus 16 DG~v~~~E~~~i~~~l~ 32 (111)
T cd07176 16 DGDIDDAELQAIEALLR 32 (111)
T ss_pred ccCCCHHHHHHHHHHHH
Confidence 79999999998888765
No 190
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=21.14 E-value=2.5e+02 Score=18.38 Aligned_cols=50 Identities=16% Similarity=0.131 Sum_probs=29.9
Q ss_pred HHHHHHhhhhhcCCCCCCCCHHHHHhhcCCCCCCCcHHHHHHHHhhhccCCCCCcCHHHHHHHH
Q psy3180 262 KNEKEQFAMYRDKNGDGFMDEEEVKNWILPPDFDHSDAEARHLIYESDSDADQKLTKDEILAKY 325 (346)
Q Consensus 262 ~~~~~~F~~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~l~~~~D~~~dG~i~~~eF~~~~ 325 (346)
..+..+.... .+.+|.|+..++...+ ...+..+|...=|.-++.+|++.+
T Consensus 8 ~~l~~ll~~~--~~~~g~v~ls~l~~~~------------~~~~~~f~~~~yG~~~l~~ll~~~ 57 (74)
T PF12872_consen 8 KLLRELLESQ--KGEDGWVSLSQLGQEY------------KKKYPDFDPRDYGFSSLSELLESL 57 (74)
T ss_dssp HHHHHHHHHT--CTTTSSEEHHHHHHHH------------HHHHTT--TCCTTSSSHHHHHHT-
T ss_pred HHHHHHHHhC--cCCCceEEHHHHHHHH------------HHHCCCCCccccCCCcHHHHHHhC
Confidence 3445555332 2336678888877664 333466777778888888888753
No 191
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=20.87 E-value=2.2e+02 Score=22.01 Aligned_cols=38 Identities=11% Similarity=0.176 Sum_probs=22.8
Q ss_pred CCCCCCHHHHHhhcCCccchhhhHHHHHHHHhhhccCC
Q psy3180 113 GDRALTREEFASFLHPEETAHMRDLVVVETMEDIDKDK 150 (346)
Q Consensus 113 ~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~~~~~d~~~ 150 (346)
..+.|+.+-|+.+|+......+++.....+|..|-...
T Consensus 45 ~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 45 PEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp ETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred CCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 34578899998888866555677777777777776543
Done!