BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3181
(349 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H0E2|TOLIP_HUMAN Toll-interacting protein OS=Homo sapiens GN=TOLLIP PE=1 SV=1
Length = 274
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 120/201 (59%), Gaps = 25/201 (12%)
Query: 1 FLRPNNSLSNHNSNHQTDLDQQTALALQNELAGAYSTASSLIQNPVGRLNITVVQAKLVK 60
FLR ++ Q LD Q A LQ GA T VGRLNITVVQAKL K
Sbjct: 21 FLR----ITPTQQQRQVQLDAQAAQQLQ--YGGAVGT--------VGRLNITVVQAKLAK 66
Query: 61 NYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQGVTSIYLEIYDECSF 120
NYG+ T+MDPY RLR+G+ VYET T +G K PRWNK + C +P GV S YLEI+DE +F
Sbjct: 67 NYGM-TRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIHCTVPPGVDSFYLEIFDERAF 125
Query: 121 TMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVLSYTV----------S 170
+MD+ IAW I IP S+ +G+ + W+ LSG+QG+DKEGMINLV+SY +
Sbjct: 126 SMDDRIAWTHITIPESLRQGKVEDKWYSLSGRQGDDKEGMINLVMSYALLPAAMVMPPQP 185
Query: 171 FFFFLLLLENSISYLEITKHP 191
+ + + Y+ IT P
Sbjct: 186 VVLMPTVYQQGVGYVPITGMP 206
Score = 38.1 bits (87), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 15/65 (23%)
Query: 197 VFLGALPSDFLRPNNSPLSNHNSNHLTDLDQQTALALQNELAGAYSTAGSLIQNPVGRLN 256
V++G LP DFLR ++ LD Q A LQ GA T VGRLN
Sbjct: 12 VYIGELPQDFLR-----ITPTQQQRQVQLDAQAAQQLQ--YGGAVGT--------VGRLN 56
Query: 257 ITVVQ 261
ITVVQ
Sbjct: 57 ITVVQ 61
>sp|A2RUW1|TOLIP_RAT Toll-interacting protein OS=Rattus norvegicus GN=Tollip PE=2 SV=1
Length = 274
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 114/187 (60%), Gaps = 14/187 (7%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
VGRL+ITVVQAKL KNYG+ T+MDPY RLR+G+ VYET T +G K PRWNK + C +P
Sbjct: 52 VGRLSITVVQAKLAKNYGM-TRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIQCTVPP 110
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVL 165
GV S YLEI+DE +F+MD+ IAW I IP S+ +G+ ++W+ LSG+QG+DKEGMINLV+
Sbjct: 111 GVDSFYLEIFDERAFSMDDRIAWTHITIPESLKQGQVEDEWYSLSGRQGDDKEGMINLVM 170
Query: 166 SYTV----------SFFFFLLLLENSISYLEITKHPLYAAKVFLGALPSDFLRPNNSPLS 215
SYT + + + Y+ I P + G +P P +P
Sbjct: 171 SYTSLPAAMMMPPQPVVLMPTVYQQGVGYVPIAGMPAVCSP---GMVPMAMPPPAVAPQP 227
Query: 216 NHNSNHL 222
N L
Sbjct: 228 RCNEEDL 234
>sp|Q9QZ06|TOLIP_MOUSE Toll-interacting protein OS=Mus musculus GN=Tollip PE=1 SV=1
Length = 274
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 114/187 (60%), Gaps = 14/187 (7%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
VGRL+ITVVQAKL KNYG+ T+MDPY RLR+G+ VYET T +G K PRWNK + C +P
Sbjct: 52 VGRLSITVVQAKLAKNYGM-TRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIQCTVPP 110
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVL 165
GV S YLEI+DE +F+MD+ IAW I IP S+ +G+ ++W+ LSG+QG+DKEGMINLV+
Sbjct: 111 GVDSFYLEIFDERAFSMDDRIAWTHITIPESLKQGQVEDEWYSLSGRQGDDKEGMINLVM 170
Query: 166 SYTV----------SFFFFLLLLENSISYLEITKHPLYAAKVFLGALPSDFLRPNNSPLS 215
SYT + + + Y+ I P + G +P P +P
Sbjct: 171 SYTSLPAAMMMPPQPVVLMPTVYQQGVGYVPIAGMPAVCSP---GMVPMAMPPPAVAPQP 227
Query: 216 NHNSNHL 222
N L
Sbjct: 228 RCNEEDL 234
>sp|Q5ZK05|TOLIP_CHICK Toll-interacting protein OS=Gallus gallus GN=TOLLIP PE=2 SV=1
Length = 274
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/123 (61%), Positives = 97/123 (78%), Gaps = 1/123 (0%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
VGRL+ITVVQAKL KNYG+ T+MDPY R+R+G+ VYET T +G K PRWNK + C +P
Sbjct: 52 VGRLSITVVQAKLAKNYGM-TRMDPYCRIRLGYAVYETPTAHNGAKNPRWNKVIQCTVPP 110
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVL 165
GV S YLEI+DE +F+MD+ IAW I IP S+ +G ++W+ LSG+QG+DKEGMINLV+
Sbjct: 111 GVDSFYLEIFDERAFSMDDRIAWTHITIPESLKQGNVEDEWYSLSGRQGDDKEGMINLVM 170
Query: 166 SYT 168
SYT
Sbjct: 171 SYT 173
>sp|Q2LGB5|TOLIP_BOVIN Toll-interacting protein OS=Bos taurus GN=TOLLIP PE=2 SV=1
Length = 273
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 106/156 (67%), Gaps = 11/156 (7%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
VGRL++TVVQAKL KNYG+ T+MDPY RLR+G+ VYET T +G K PRWNK + C +P
Sbjct: 52 VGRLSVTVVQAKLAKNYGM-TRMDPYCRLRLGYAVYETPTAHNGAKNPRWNKVIQCTVPP 110
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVL 165
GV S YLEI+DE +F+MD+ IAW + IP ++ +G+ ++W+ LSG+QG+DKEGMINLVL
Sbjct: 111 GVDSFYLEIFDERAFSMDDRIAWTHVTIPEALKQGKVVDEWYSLSGRQGDDKEGMINLVL 170
Query: 166 SYTV----------SFFFFLLLLENSISYLEITKHP 191
SYT + + + Y+ IT P
Sbjct: 171 SYTSLPAAMMMPPQPVVLMPTVYQQGVGYVPITGMP 206
>sp|Q6INE3|TOIPB_XENLA Toll-interacting protein B OS=Xenopus laevis GN=tollip-b PE=2 SV=1
Length = 269
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 98/123 (79%), Gaps = 1/123 (0%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
+GRL+ITVVQAKL KNYG+ T+MDPY R+R+G+ VYET T +G K PRWNK + C +P
Sbjct: 52 MGRLSITVVQAKLAKNYGM-TRMDPYCRIRLGYAVYETPTAHNGAKNPRWNKVIQCTIPP 110
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVL 165
GV S Y+EI+DE +F+MD+ IAW I IP ++ +G+ ++WF LSGKQG+DKEGMINLV+
Sbjct: 111 GVDSFYIEIFDERAFSMDDRIAWTHITIPETLKEGKHVDEWFSLSGKQGDDKEGMINLVM 170
Query: 166 SYT 168
SYT
Sbjct: 171 SYT 173
>sp|Q6DFR0|TOLIP_XENTR Toll-interacting protein OS=Xenopus tropicalis GN=tollip PE=2 SV=1
Length = 269
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Query: 40 SLIQNPVGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEV 99
S + +GRL+ITVVQAKL KNYG+ T+MDPY R+R+G+ VYET T +G K PRWNK +
Sbjct: 46 SGVMGTMGRLSITVVQAKLAKNYGM-TRMDPYCRIRLGYAVYETPTAHNGAKNPRWNKVI 104
Query: 100 FCLLPQGVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEG 159
C +P GV S YLEI+DE +F+MD+ IAW I IP ++ +G+ ++WF LSG+QG+DKEG
Sbjct: 105 QCTIPPGVDSFYLEIFDERAFSMDDRIAWTHITIPETLKEGKHVDEWFSLSGRQGDDKEG 164
Query: 160 MINLVLSYT 168
MINLV+SYT
Sbjct: 165 MINLVMSYT 173
>sp|Q3B8H2|TOIPA_XENLA Toll-interacting protein A OS=Xenopus laevis GN=tollip-a PE=2 SV=1
Length = 269
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Query: 40 SLIQNPVGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEV 99
S + +GRL+ITVVQAKL KNYG+ T+MDPY R+R+G+ VYET T +G K PRWNK +
Sbjct: 46 SGVMGTMGRLSITVVQAKLAKNYGM-TRMDPYCRIRLGYAVYETPTAHNGAKNPRWNKVI 104
Query: 100 FCLLPQGVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEG 159
C +P GV S YLEI+DE +F+MD+ IAW I IP ++ +G+ ++WF LSG+QG+DKEG
Sbjct: 105 QCTIPPGVDSFYLEIFDERAFSMDDRIAWTHITIPETLKEGKHVDEWFSLSGRQGDDKEG 164
Query: 160 MINLVLSYT 168
MINLV+SYT
Sbjct: 165 MINLVMSYT 173
>sp|Q4LBC7|TOIPB_ONCMY Toll-interacting protein B OS=Oncorhynchus mykiss GN=tollipb PE=2
SV=1
Length = 275
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 115/191 (60%), Gaps = 12/191 (6%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
V RL+ITVVQAKL KNYG+ T+MDPY R+R+G+ VYET T +G K PRWNK + C +P
Sbjct: 52 VRRLSITVVQAKLAKNYGM-TRMDPYCRVRLGYAVYETPTAHNGAKNPRWNKVIQCTVPP 110
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVL 165
GV S YLEI+DE +F+MD+ IAW + IP + +G ++W+ LSG+QG+DKEGMINLV+
Sbjct: 111 GVDSFYLEIFDERAFSMDDRIAWTHVTIPEGLREGSVVDEWYSLSGRQGDDKEGMINLVM 170
Query: 166 SY---------TVSFFFFLLLLENSISYLEITKHPLY--AAKVFLGALPSDFLRPNNSPL 214
SY + + + + Y+ I P V +G + + P +P
Sbjct: 171 SYANMTAGMHMSPPVVLMPTVYQQGVGYIPIAGVPTVYNQGMVPMGMPAAPTVAPQEAPC 230
Query: 215 SNHNSNHLTDL 225
S + L D+
Sbjct: 231 SEEDLKALQDM 241
>sp|B5X370|TOLIP_SALSA Toll-interacting protein OS=Salmo salar GN=tollip PE=2 SV=1
Length = 275
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 115/191 (60%), Gaps = 12/191 (6%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
VGRL+ITVVQAKL KNYG+ T+MDPY R+R+G+ VYET T +G K PRWNK + C +P
Sbjct: 52 VGRLSITVVQAKLAKNYGM-TRMDPYCRVRLGYAVYETPTAHNGAKNPRWNKVIQCTVPP 110
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVL 165
GV S YLEI+DE +F+MD+ IAW + IP + +G ++W+ LSG+QG+DKEGMINLV+
Sbjct: 111 GVDSFYLEIFDERAFSMDDRIAWTHVTIPEGLREGSVVDEWYSLSGRQGDDKEGMINLVM 170
Query: 166 SY---------TVSFFFFLLLLENSISYLEITKHPLY--AAKVFLGALPSDFLRPNNSPL 214
SY + + + + Y+ I P V +G + + +P
Sbjct: 171 SYANMPAGMHMSPPVVLMPTVYQQGVGYVPIAGVPTVYNQGMVPMGMPAAPTVAAQEAPC 230
Query: 215 SNHNSNHLTDL 225
S + L D+
Sbjct: 231 SEEDLKALQDM 241
>sp|C1BZR1|TOLIP_ESOLU Toll-interacting protein OS=Esox lucius GN=tollip PE=2 SV=1
Length = 275
Score = 161 bits (408), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 115/191 (60%), Gaps = 12/191 (6%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
VGRL+ITVVQAKL KNYG+ T+MDPY R+R+G+ VYET T +G K PRWNK + C +P
Sbjct: 52 VGRLSITVVQAKLAKNYGM-TRMDPYCRVRLGYAVYETPTAHNGAKNPRWNKVIQCTVPP 110
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVL 165
GV S YLEI+DE +F+MD+ IAW + IP + +G ++W+ LS +QG+DKEGMINLV+
Sbjct: 111 GVGSFYLEIFDERAFSMDDRIAWTHVTIPEGLREGSVVDEWYSLSDRQGDDKEGMINLVM 170
Query: 166 SY---------TVSFFFFLLLLENSISYLEITKHPLY--AAKVFLGALPSDFLRPNNSPL 214
S+ + + + + Y+ I P V +G + + P +P
Sbjct: 171 SFANMPAGMHMSPPVVLMPTVYQQGVGYIPIAGVPTAYSPGMVPMGMPAAPTVTPQEAPC 230
Query: 215 SNHNSNHLTDL 225
S + L D+
Sbjct: 231 SEEDLKALQDM 241
>sp|Q7ZV43|TOLIP_DANRE Toll-interacting protein OS=Danio rerio GN=tollip PE=2 SV=1
Length = 276
Score = 161 bits (407), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 117/191 (61%), Gaps = 13/191 (6%)
Query: 47 GRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQG 106
GRL+ITVVQAKL KNYG+ T+MDPY R+R+G+ VYET T +G K PRWNK + C +P G
Sbjct: 53 GRLSITVVQAKLAKNYGM-TRMDPYCRIRLGYAVYETPTAHNGAKNPRWNKVIQCTVPPG 111
Query: 107 VTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVLS 166
V S YLEI+DE +F+MD+ IAW + IP ++ +G ++W+ LSG+QG+DKEGMINLV+S
Sbjct: 112 VDSFYLEIFDERAFSMDDRIAWTHVTIPENLREGTVVDEWYSLSGRQGDDKEGMINLVMS 171
Query: 167 YTV----------SFFFFLLLLENSISYLEITKHP-LYAAKVFLGALPSDF-LRPNNSPL 214
+ + + + Y+ I P +Y V +P+ + ++P
Sbjct: 172 FATIPAGMMMQPQPVVLMPTVYQQGVGYVPIAGVPGMYNQGVVPMGMPAAAPVASQSAPC 231
Query: 215 SNHNSNHLTDL 225
S + L D+
Sbjct: 232 SEEDLKALQDM 242
>sp|Q4LBC8|TOIPA_ONCMY Toll-interacting protein A OS=Oncorhynchus mykiss GN=tollipa PE=2
SV=1
Length = 277
Score = 160 bits (406), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 116/193 (60%), Gaps = 14/193 (7%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
VGRL+ITVVQAKL KNYG+ T+MDPY R+R+G+ VYET T +G K PRWNK + C +P
Sbjct: 52 VGRLSITVVQAKLAKNYGM-TRMDPYCRVRLGYAVYETPTAHNGAKNPRWNKVIQCTVPP 110
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWF--PLSGKQGEDKEGMINL 163
GV S YLEI+DE +F+MD+ IAW + IP + +G ++W+ LSG+QG+DKEGMINL
Sbjct: 111 GVDSFYLEIFDERAFSMDDRIAWTHVTIPEGLREGSVVDEWYSLSLSGRQGDDKEGMINL 170
Query: 164 VLSY---------TVSFFFFLLLLENSISYLEITKHPLY--AAKVFLGALPSDFLRPNNS 212
V+SY + + + + Y+ I P V +G + + P +
Sbjct: 171 VMSYANMPAGMHMSPPVVLMPTVYQQGVGYVPIAGVPTVYNQGMVPMGMPAAPTVAPQEA 230
Query: 213 PLSNHNSNHLTDL 225
P S + L D+
Sbjct: 231 PCSEEDLKALQDM 243
>sp|Q9C8S6|Y1322_ARATH C2 domain-containing protein At1g63220 OS=Arabidopsis thaliana
GN=At1g63220 PE=1 SV=1
Length = 147
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 45 PVGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLP 104
P G L + +V AK +++ + MDPYV+L +++ G P WN+ +
Sbjct: 2 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVS 61
Query: 105 QGVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKG 140
+G T + +I+D+ T D+ + A IP+ ++G
Sbjct: 62 EGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEG 97
>sp|O94701|INN1_SCHPO Ingression protein fic1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=fic1 PE=1 SV=1
Length = 272
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 41 LIQNPVGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWN 96
+ +NP+G L + + +AK + N LV K PY RVG V T TD G+ P WN
Sbjct: 1 MSKNPLGTLVVRIWKAKNLPNKALVGKQSPYCVCRVGEVVKRTQTDKRSGQEPSWN 56
>sp|A0JJX5|SYT4_ARATH Synaptotagmin-4 OS=Arabidopsis thaliana GN=SYT4 PE=2 SV=1
Length = 569
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 31 LAGAYSTASSLIQNPVGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDP--S 88
L G YS L PVG+L++ VVQAK + N ++ K DPY + + T S
Sbjct: 251 LPGDYS---DLELKPVGKLDVKVVQAKDLANKDMIGKSDPYAIVFIRPLPDRTKKTKTIS 307
Query: 89 GGKFPRWNKEVFCLLPQGVTSIYL--EIYDECSFTMDELIAWAKIPIPSSVMKGETHEDW 146
P WN E F + + V++ +L ++D+ +LI A++P+ + ++ G+ + W
Sbjct: 308 NSLNPIWN-EHFEFIVEDVSTQHLTVRVFDDEGVGSSQLIGAAQVPL-NELVPGKVKDIW 365
Query: 147 FPL 149
L
Sbjct: 366 LKL 368
>sp|Q8L706|SYT5_ARATH Synaptotagmin-5 OS=Arabidopsis thaliana GN=SYT5 PE=2 SV=1
Length = 560
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 47 GRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKF-PRWNKEVFCLLPQ 105
G L++TV+ A+ + L+ K DPYV L + ++ T P WN+ ++
Sbjct: 435 GVLSVTVISAEEIPIQDLMGKADPYVVLSMKKSGAKSKTRVVNDSLNPVWNQTFDFVVED 494
Query: 106 GVTS-IYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLV 164
G+ + LE++D +F D I + + +M+ E ++DW+PL E K G + L
Sbjct: 495 GLHDMLVLEVWDHDTFGKD-YIGRCILTLTRVIME-EEYKDWYPLD----ESKTGKLQLH 548
Query: 165 LSY 167
L +
Sbjct: 549 LKW 551
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 39 SSLIQNPVGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPS--GGKFPRWN 96
S L PVG L + +VQAK + N LV K DP+ ++ + +T + P WN
Sbjct: 254 SDLELKPVGMLEVKLVQAKNLTNKDLVGKSDPFAKMFIRPLREKTKRSKTINNDLNPIWN 313
Query: 97 KEV-FCLLPQGVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPL 149
+ F + + + IYD+ ELI A+I + + G+ + W L
Sbjct: 314 EHFEFVVEDASTQHLVVRIYDDEGVQASELIGCAQIRL-CELEPGKVKDVWLKL 366
>sp|O14065|YC31_SCHPO Uncharacterized protein C962.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC962.01 PE=2 SV=3
Length = 1429
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
Query: 37 TASSLIQNPVGRLNITVVQAKLVKNYGLVT-KMDPYVRLRVGHCVYETHTDPSGGKFPRW 95
+A + I N VG + ++V++A + N L T K DPY R+ VG+ V P W
Sbjct: 747 SAKTYIDNLVGVMRLSVIKANDLVNVELPTRKSDPYARVIVGNSVVARTVYTPNNLNPIW 806
Query: 96 NKEVFCLLPQGVTSIYLEIYDECSFTMDELIAWAKIPIP--------------SSVMKGE 141
N+ ++ + +I LE D D + +A I + +S + G
Sbjct: 807 NEILYVPIMADTKTIDLEAMDYEESGNDRSLGYASINVQKYIRNAKRLDRSALASTVFGT 866
Query: 142 THEDWFPLSGKQGEDKEGMINLVLSY 167
+ + L+ ++G+ G I++ Y
Sbjct: 867 SEVNALTLTSRKGQSVRGTISVNCDY 892
>sp|Q0JBH9|ERG3_ORYSJ Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica
GN=ERG3 PE=2 SV=1
Length = 144
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 47 GRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQG 106
G L + +V AK ++N + MDPY L+ ++ G P WN+ +
Sbjct: 4 GTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVTHN 63
Query: 107 VTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKG 140
T + +++ D S T D+ + A I + + +G
Sbjct: 64 ATELIIKLMDSDSGTDDDFVGEATISLEAIYTEG 97
>sp|Q25AG5|ERG3_ORYSI Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica GN=ERG3
PE=2 SV=1
Length = 144
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 47 GRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQG 106
G L + +V AK ++N + MDPY L+ ++ G P WN+ +
Sbjct: 4 GTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVTHN 63
Query: 107 VTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKG 140
T + +++ D S T D+ + A I + + +G
Sbjct: 64 ATELIIKLMDSDSGTDDDFVGEATISLEAIYTEG 97
>sp|Q62940|NEDD4_RAT E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus GN=Nedd4
PE=1 SV=1
Length = 887
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 37 TASSLIQNPVGRLNITVVQAKLVKNYGLVTK-----MDPYVRLRVGHCVYETHTDPSGGK 91
TA S+I + + VV+ K++ GL K DPYVR+ T DP G
Sbjct: 61 TAESIISS-FNNDDTRVVRVKVIAGIGLAKKDILGASDPYVRV--------TLYDPMSGV 111
Query: 92 F-------------PRWNKEV-FCLLPQGVTSIYLEIYDECSFTMDELIAWAKIPI 133
P+WN+E+ F +LPQ I E++DE T D+ + +P+
Sbjct: 112 LTSVQTKTIKKSLNPKWNEEILFRVLPQ-QHRILFEVFDENRLTRDDFLGQVDVPL 166
>sp|Q8LFN9|AGD13_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD13
OS=Arabidopsis thaliana GN=AGD13 PE=2 SV=1
Length = 336
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
+G L +T+ + + +++ DPYV L +G +T T + P WN+E+ +P+
Sbjct: 179 IGLLKVTIKKGTNLAIRDMMSS-DPYVVLNLGKQKLQT-TVMNSNLNPVWNQELMLSVPE 236
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPI 133
+ L++YD +F+ D+++ A I I
Sbjct: 237 SYGPVKLQVYDYDTFSADDIMGEADIDI 264
>sp|Q6DN14|MCTP1_HUMAN Multiple C2 and transmembrane domain-containing protein 1 OS=Homo
sapiens GN=MCTP1 PE=2 SV=2
Length = 999
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 47 GRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEV-FCLLPQ 105
G ++IT+++ + +K DPYV+ R+GH Y++ P P+W ++ F L +
Sbjct: 470 GIVSITLIEGRDLKAMDSNGLSDPYVKFRLGHQKYKSKIMPKTLN-PQWREQFDFHLYEE 528
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVL 165
I + +D+ + D+ I ++ + S++ + +TH+ L E+ EG + L++
Sbjct: 529 RGGVIDITAWDKDAGKRDDFIGRCQVDL-SALSREQTHKLELQL-----EEGEGHLVLLV 582
Query: 166 SYTVS 170
+ T S
Sbjct: 583 TLTAS 587
>sp|Q9FVJ3|AGD12_ARATH ADP-ribosylation factor GTPase-activating protein AGD12
OS=Arabidopsis thaliana GN=AGD12 PE=1 SV=1
Length = 337
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
+G L +T+ + + +++ DPYV L +G ++ S P WN+E+ +P
Sbjct: 180 IGLLKVTIKKGTNMAIRDMMSS-DPYVVLTLGQQKAQSTVVKSNLN-PVWNEELMLSVPH 237
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPI 133
S+ L+++D +F+ D+++ A+I I
Sbjct: 238 NYGSVKLQVFDYDTFSADDIMGEAEIDI 265
>sp|P46935|NEDD4_MOUSE E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus GN=Nedd4 PE=1
SV=3
Length = 887
Score = 38.9 bits (89), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 28/103 (27%)
Query: 50 NITVVQAKLVKNYGLVTK-----MDPYVRLRVGHCVYETHTDPSGGKF------------ 92
+ VV+ K++ GL K DPYVR+ T DP G
Sbjct: 76 DTRVVRVKVIAGIGLAKKDILGASDPYVRV--------TLYDPMSGILTSVQTKTIKKSL 127
Query: 93 -PRWNKEV-FCLLPQGVTSIYLEIYDECSFTMDELIAWAKIPI 133
P+WN+E+ F +LPQ I E++DE T D+ + +P+
Sbjct: 128 NPKWNEEILFRVLPQ-RHRILFEVFDENRLTRDDFLGQVDVPL 169
>sp|P24505|SY61_DIPOM Synaptotagmin-A OS=Diplobatis ommata GN=P65-A PE=2 SV=1
Length = 427
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 48 RLNITVVQAKLVKNYGLVTKMDPYVRLRV---GHCVYETHTDPSGGKFPRWNKEVFCLLP 104
+L + ++QA + + DPYV++ V YET P +N+ +P
Sbjct: 163 QLIVGIIQAAELPALDVGGTSDPYVKVFVLPDKKKKYETKVHRKTLN-PVFNESFIFKIP 221
Query: 105 Q---GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMI 161
G ++ + +YD F+ ++I AK+P+ ++V G E+W L G + E++E +
Sbjct: 222 YSELGGKTLVMAVYDFDRFSKHDVIGEAKVPM-NTVDFGHVTEEWRDLQGAEKEEQEKLG 280
Query: 162 NLVLS 166
++ S
Sbjct: 281 DICFS 285
>sp|Q54E35|GACEE_DICDI Rho GTPase-activating protein gacEE OS=Dictyostelium discoideum
GN=gacEE PE=3 SV=2
Length = 570
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 47 GRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQG 106
G++ TVV+++ + L K DP+V ++ + T T P++N+ + +
Sbjct: 244 GQVQGTVVKSRNLAAKDLNGKSDPFVIIKAEQQQHRTQTIYKSLN-PQFNEAFHFDITKH 302
Query: 107 VTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDK 157
+Y ++DE F + + +P+ G W PLS + +DK
Sbjct: 303 QGYVYFFVWDEDKFKTADFMGEVAVPLSLLPPNGSEISLWLPLSPRNSKDK 353
>sp|Q8L7A4|AGD11_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD11
OS=Arabidopsis thaliana GN=AGD11 PE=2 SV=1
Length = 385
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 46 VGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQ 105
VG + + VV+ + ++T DPYV L +G +T P WN+ + +P+
Sbjct: 228 VGLIKVNVVKGTNLAVRDVMTS-DPYVILALGQQSVKTRV-IKNNLNPVWNETLMLSIPE 285
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHE 144
+ + + +YD+ +F+ D+ + A+I I V + +E
Sbjct: 286 PMPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVSAAKAYE 324
>sp|Q54Y08|NGAP_DICDI Probable Ras GTPase-activating-like protein ngap OS=Dictyostelium
discoideum GN=ngap PE=2 SV=1
Length = 877
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 69 DPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQGVTS-IYLEIYDECSFTMDELIA 127
DPY +++ T T P P W +E + ++ + L + DE ++ DE I
Sbjct: 141 DPYCTVQLEKQKQRTRTIPKKLN-PFWCEEFQLEISDPASAKLVLSVMDEKKYSNDEHIG 199
Query: 128 WAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMINLVLSY 167
IPI +++ + E WFPL+ Q K I ++ ++
Sbjct: 200 KLVIPI-NTLKDQKERELWFPLTQPQSSKKVPQIQILFNF 238
>sp|P29101|SYT2_RAT Synaptotagmin-2 OS=Rattus norvegicus GN=Syt2 PE=1 SV=1
Length = 422
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 48 RLNITVVQAKLVKNYGLVTKMDPYVR---LRVGHCVYETHTDPSGGKFPRWNKEVFCLLP 104
+L + V+QA + + DPYV+ L YET P +N+ +P
Sbjct: 158 QLTVGVLQAAELPALDMGGTSDPYVKVFLLPDKKKKYETKVHRKTLN-PAFNETFTFKVP 216
Query: 105 Q---GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMI 161
G ++ + IYD F+ ++I K+P+ ++V G+ E+W L G + E+ E +
Sbjct: 217 YQELGGKTLVMAIYDFDRFSKHDIIGEVKVPM-NTVDLGQPIEEWRDLQGGEKEEPEKLG 275
Query: 162 NLVLS 166
++ S
Sbjct: 276 DICTS 280
>sp|Q9NZM3|ITSN2_HUMAN Intersectin-2 OS=Homo sapiens GN=ITSN2 PE=1 SV=3
Length = 1697
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 22/107 (20%)
Query: 38 ASSLIQNPVGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWN- 96
A S + +GRL + V++A +K K +PY + +G Y T T P+WN
Sbjct: 1560 ARSQKTSGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLN-PKWNF 1618
Query: 97 ----------KEVFCLLPQGVTSIYLEIYDECSFTMDELIAWAKIPI 133
++V CL ++D F+ D+ + +IP+
Sbjct: 1619 NCQFFIKDLYQDVLCLT----------LFDRDQFSPDDFLGRTEIPV 1655
>sp|Q8N9I0|SYT2_HUMAN Synaptotagmin-2 OS=Homo sapiens GN=SYT2 PE=1 SV=2
Length = 419
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 48 RLNITVVQAKLVKNYGLVTKMDPYVR---LRVGHCVYETHTDPSGGKFPRWNKEVFCLLP 104
+L + V+QA + + DPYV+ L YET P +N+ +P
Sbjct: 155 QLTVGVLQAAELPALDMGGTSDPYVKVFLLPDKKKKYETKVHRKTLN-PAFNETFTFKVP 213
Query: 105 Q---GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGEDKEGMI 161
G ++ + IYD F+ ++I K+P+ ++V G+ E+W L G + E+ E +
Sbjct: 214 YQELGGKTLVMAIYDFDRFSKHDIIGEVKVPM-NTVDLGQPIEEWRDLQGGEKEEPEKLG 272
Query: 162 NLVLS 166
++ S
Sbjct: 273 DICTS 277
>sp|Q9D620|RFIP1_MOUSE Rab11 family-interacting protein 1 OS=Mus musculus GN=Rab11fip1
PE=1 SV=2
Length = 645
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 17/141 (12%)
Query: 49 LNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQGVT 108
+ +TV+QA+ ++ G D Y ++VG Y T P W +E LP ++
Sbjct: 20 VQVTVLQARGLRAKGPGGTSDAYAVIQVGKEKYATSVSERSLGAPVWREEATFELPPLLS 79
Query: 109 S---------IYLEIYDECSFTMDELIAWAKIPIPS-SVMKGETHEDWFPLSGKQG-EDK 157
S + L + +D+ + A++ + +G + W+ L K G +DK
Sbjct: 80 SGAAPAAAATLQLTVLHRALLGLDKFLGRAEVDLRELHRDQGRRKKQWYTLKSKPGKKDK 139
Query: 158 E-GMINLVLSY-----TVSFF 172
E G I + + + T S F
Sbjct: 140 ERGEIEVDIQFMRNNMTASMF 160
>sp|Q9ZVT9|C2GR1_ARATH C2 and GRAM domain-containing protein At1g03370 OS=Arabidopsis
thaliana GN=At1g03370 PE=2 SV=4
Length = 1020
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
Query: 48 RLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQGV 107
+L + VV+A+ + L DPYVRL++G T P+W ++ +
Sbjct: 2 KLQVRVVEARNLPAMDLNGFSDPYVRLQLGKQRSRTKVVKKNLN-PKWTEDFSFGVDDLN 60
Query: 108 TSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHE---DWFPLSGKQGEDKEGMINLV 164
+ + + DE + D+ + ++ + S V E W+PL+ K+ K+ ++
Sbjct: 61 DELVVSVLDEDKYFNDDFVGQVRVSV-SLVFDAENQSLGTVWYPLNPKKKGSKKDCGEIL 119
Query: 165 LSYTVS 170
L S
Sbjct: 120 LKICFS 125
>sp|Q9C5Y0|PLDD1_ARATH Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2
Length = 868
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 57 KLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQGVTSIYLEIYD 116
K ++++ V DPYV + V + P W+++ + + ++ D
Sbjct: 66 KNIRSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVKD 125
Query: 117 ECSFTMDELIAWAKIPIPSSVMKGETHEDWFPLSGKQGE 155
+ F ++I AKIP+ + GE WFP+ G G+
Sbjct: 126 DDVFGA-QIIGTAKIPV-RDIASGERISGWFPVLGASGK 162
>sp|A0Q5C2|MURD_FRATN UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Francisella
tularensis subsp. novicida (strain U112) GN=murD PE=3
SV=1
Length = 417
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 273 YQIVSGAYYRSSRSEQEVCSCKFLA-------LIKLDILDTYLFSANKPIPLLKKFK 322
YQI+ GA YR+S ++ K ++ L+ILD N+ I +KKFK
Sbjct: 216 YQIIRGAIYRNSTKLLDIAETKLFGEHNLENIIVVLNILDRLGLDINQAIDSIKKFK 272
>sp|Q58FX0|BAP2_ARATH BON1-associated protein 2 OS=Arabidopsis thaliana GN=BAP2 PE=1 SV=1
Length = 207
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 49 LNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLP--QG 106
L I V+ A+ +K K Y +R+ + + D GG +P W +P
Sbjct: 10 LEIEVISAEGLKVDRKPLKKKTYSVVRIDEKSWASKVDELGGSYPIWKDRFDMEMPINAS 69
Query: 107 VTSIYLEIYDECSFT-MDELIAWAKIPI 133
V I +E+Y S + D+ + +AKIP+
Sbjct: 70 VRFISIEVYYRTSGSGRDKNVGYAKIPV 97
>sp|A4IZG9|MURD_FRATW UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Francisella
tularensis subsp. tularensis (strain WY96-3418) GN=murD
PE=3 SV=1
Length = 416
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 273 YQIVSGAYYRSSRSEQEVCSCKFLA-------LIKLDILDTYLFSANKPIPLLKKFK 322
YQI+ GA YR+S ++ K ++ L+ILD N+ I +KKFK
Sbjct: 215 YQIIRGAIYRNSTKLLDIVETKLFGEHNLENIIVVLNILDRLGLDINQAIASIKKFK 271
>sp|Q03640|TCB3_YEAST Tricalbin-3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TCB3 PE=1 SV=1
Length = 1545
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 18/128 (14%)
Query: 30 ELAGAYSTASSLIQNPVGRLNITVVQAKLVKNYGLVTKMDPYVRLRVGH-----CVYETH 84
E+ GA++ A+S + P+G + + V A + + V +DPY + + +Y +
Sbjct: 782 EMTGAFAAANS-VSEPIGCIKLDVKDAIIKGDLSGVGDVDPYYTVSLNRRVLYKSIYHSD 840
Query: 85 TDPSGGKFPRWNKEVFCLLPQGVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHE 144
TD P ++ + + + LE +D D I +IP S+V K +
Sbjct: 841 TD-----HPIFDNSTYVPIFSPNQILTLEFHDYQKIGKDRFIGSVQIPT-SNVFKKD--- 891
Query: 145 DWFPLSGK 152
P SGK
Sbjct: 892 ---PKSGK 896
>sp|Q0BKM8|MURD_FRATO UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Francisella
tularensis subsp. holarctica (strain OSU18) GN=murD PE=3
SV=1
Length = 416
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 273 YQIVSGAYYRSSRSEQEVCSCKFLA-------LIKLDILDTYLFSANKPIPLLKKFK 322
YQI+ GA YR+S ++ K ++ L+ILD N+ I +KKFK
Sbjct: 215 YQIIRGAIYRNSTKLLDIVETKLFGEHNLENIIVVLNILDRLGLDINQAIDSIKKFK 271
>sp|Q2A1Z9|MURD_FRATH UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Francisella
tularensis subsp. holarctica (strain LVS) GN=murD PE=3
SV=1
Length = 416
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 273 YQIVSGAYYRSSRSEQEVCSCKFLA-------LIKLDILDTYLFSANKPIPLLKKFK 322
YQI+ GA YR+S ++ K ++ L+ILD N+ I +KKFK
Sbjct: 215 YQIIRGAIYRNSTKLLDIVETKLFGEHNLENIIVVLNILDRLGLDINQAIDSIKKFK 271
>sp|A7NDX4|MURD_FRATF UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Francisella
tularensis subsp. holarctica (strain FTNF002-00 / FTA)
GN=murD PE=3 SV=1
Length = 416
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 273 YQIVSGAYYRSSRSEQEVCSCKFLA-------LIKLDILDTYLFSANKPIPLLKKFK 322
YQI+ GA YR+S ++ K ++ L+ILD N+ I +KKFK
Sbjct: 215 YQIIRGAIYRNSTKLLDIVETKLFGEHNLENIIVVLNILDRLGLDINQAIDSIKKFK 271
>sp|B2SDR8|MURD_FRATM UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Francisella
tularensis subsp. mediasiatica (strain FSC147) GN=murD
PE=3 SV=1
Length = 416
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 273 YQIVSGAYYRSSRSEQEVCSCKFLA-------LIKLDILDTYLFSANKPIPLLKKFK 322
YQI+ GA YR+S ++ K ++ L+ILD N+ I +KKFK
Sbjct: 215 YQIIRGAIYRNSTKLLDIVETKLFGEHNLENIIVVLNILDRLGLDINQAIDSIKKFK 271
>sp|Q5NHK3|MURD_FRATT UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Francisella
tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
GN=murD PE=3 SV=1
Length = 416
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 273 YQIVSGAYYRSSRSEQEVCSCKFLA-------LIKLDILDTYLFSANKPIPLLKKFK 322
YQI+ GA YR+S ++ K ++ L+ILD N+ I +KKFK
Sbjct: 215 YQIIRGAIYRNSTKLLDIVETKLFGEHNLENIIVVLNILDRLGLDINQAIDSIKKFK 271
>sp|Q14J05|MURD_FRAT1 UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Francisella
tularensis subsp. tularensis (strain FSC 198) GN=murD
PE=3 SV=1
Length = 416
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 273 YQIVSGAYYRSSRSEQEVCSCKFLA-------LIKLDILDTYLFSANKPIPLLKKFK 322
YQI+ GA YR+S ++ K ++ L+ILD N+ I +KKFK
Sbjct: 215 YQIIRGAIYRNSTKLLDIVETKLFGEHNLENIIVVLNILDRLGLDINQAIDSIKKFK 271
>sp|B6ETT4|SYT2_ARATH Synaptotagmin-2 OS=Arabidopsis thaliana GN=SYT2 PE=2 SV=1
Length = 537
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Query: 39 SSLIQNPVGRLNITVVQAKLVKNYGLVTKMDPYVRLRV------GHCVYETHTDPSGGKF 92
S ++ PVG L++ V++A +K L+ DPYV+L + G H++ +
Sbjct: 252 SKAMKKPVGLLSVKVIKAIKLKKKDLLGGSDPYVKLTLSGDKVPGKKTVVKHSNLN---- 307
Query: 93 PRWNKE 98
P WN+E
Sbjct: 308 PEWNEE 313
>sp|P53901|INN1_YEAST Ingression protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=INN1 PE=1 SV=1
Length = 409
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 47 GRLNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNK-EVFCLLPQ 105
G L++ V +A+ + N + K + +RLR+ H ++T G+ P ++ E F + P+
Sbjct: 11 GILSVYVSKARDLPNLNKLDKQNVMLRLRIAHMTRASNTLHRAGQNPVFHYLEKFDITPE 70
Query: 106 GVTSIYLEIYDECSFTMDELIAWAKIPIPSSVMKG--ETHEDWFPLSGKQGEDKEGMINL 163
+Y+E+Y + I +I + +++ E + W+ L + G++ G I +
Sbjct: 71 IKPLMYVEVYCDRRKKSPLPIGRCEIDLLNAIRADPKEGYCTWYELK-RSGDEFAGTIFI 129
Query: 164 VLSYT 168
L++T
Sbjct: 130 ELTFT 134
>sp|Q7XA06|SYT3_ARATH Synaptotagmin-3 OS=Arabidopsis thaliana GN=SYT3 PE=2 SV=1
Length = 540
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 36 STASSLIQNPVGRLNITVVQAKLVKNYGLVTKMDPYVRLRV-GHCVYETHTDPSGGKF-P 93
STAS ++ PVG L++++++A+ + L+ DPYV+L + G + T P
Sbjct: 252 STAS--VKKPVGLLHVSILRARNLLKKDLLGTSDPYVKLSLTGEKLPAKKTTIKKRNLNP 309
Query: 94 RWNKEVFCLLPQGVTS--IYLEIYDECSFTMDELIAWAKIPIPSSVMKGETHE 144
WN E F L+ + S + LE++D + + IP+ + GE E
Sbjct: 310 EWN-EHFKLIVKDPNSQVLQLEVFDWDKVGGHDRLGMQMIPL-QKINPGERKE 360
>sp|Q3U7R1|ESYT1_MOUSE Extended synaptotagmin-1 OS=Mus musculus GN=Esyt1 PE=2 SV=2
Length = 1092
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 48 RLNITVVQAKLVKNY---GLVT-KMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLL 103
R+++ Q + K+ GLV K DPYV+L+V + TH PRWN EVF ++
Sbjct: 637 RIHVLEAQDLIAKDRFLGGLVKGKSDPYVKLKVAGKSFRTHVVREDLN-PRWN-EVFEVI 694
Query: 104 PQGVTSIYLEI 114
+ LEI
Sbjct: 695 VTSIPGQELEI 705
>sp|Q6WKZ4|RFIP1_HUMAN Rab11 family-interacting protein 1 OS=Homo sapiens GN=RAB11FIP1
PE=1 SV=2
Length = 1283
Score = 32.0 bits (71), Expect = 7.7, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 49 LNITVVQAKLVKNYGLVTKMDPYVRLRVGHCVYETHTDPSGGKFPRWNKEVFCLLPQGVT 108
+ +TV+QA+ ++ G D Y ++VG Y T P W +E LP ++
Sbjct: 20 VQVTVLQARGLRAKGPGGTSDAYAVIQVGKEKYATSVSERSLGAPVWREEATFELPSLLS 79
Query: 109 S-------IYLEIYDECSFTMDELIAWAKIPIPS-SVMKGETHEDWFPLSGKQG-EDKE 158
S + L + +D+ + A++ + +G W+ L K G +DKE
Sbjct: 80 SGPAAAATLQLTVLHRALLGLDKFLGRAEVDLRDLHRDQGRRKTQWYKLKSKPGKKDKE 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,230,095
Number of Sequences: 539616
Number of extensions: 5115447
Number of successful extensions: 12311
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 12221
Number of HSP's gapped (non-prelim): 91
length of query: 349
length of database: 191,569,459
effective HSP length: 118
effective length of query: 231
effective length of database: 127,894,771
effective search space: 29543692101
effective search space used: 29543692101
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)