BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3182
(255 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 99/173 (57%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 155
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENL++D +GY+K+ D
Sbjct: 156 --EYLHSLDLIYRDLKPENLMIDQQGYIKV----------------------------TD 185
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENL++D +
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ 178
Query: 61 GYVKLV 66
GY+K+
Sbjct: 179 GYIKVT 184
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 99/173 (57%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 155
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENL++D +GY+K+ D
Sbjct: 156 --EYLHSLDLIYRDLKPENLMIDQQGYIKV----------------------------TD 185
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENL++D +
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ 178
Query: 61 GYVKLV 66
GY+K+
Sbjct: 179 GYIKVT 184
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 110/204 (53%), Gaps = 54/204 (26%)
Query: 56 LLDNRGYVKLVS-----RKKKTRQT-------RLYKTFKDSKYVYMLLEACLGGEVWTIL 103
+LD + VKL +K+ +Q +L +FKD+ +YM+LE GGE+++ L
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL 133
Query: 104 RERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVK 163
R F + A F A ++ L F EYLH+ +++RDLKPENLL+D +GY+K
Sbjct: 134 RRIGRFSEPHARFYAAQIV--LTF---------EYLHSLDLIYRDLKPENLLIDQQGYIK 182
Query: 164 LEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII 223
+ DFGF+K + +TW CGTPEY+APEII
Sbjct: 183 V----------------------------ADFGFAKRVK---GRTWXLCGTPEYLAPEII 211
Query: 224 KNRGHDRAVDYWALGILMHELLTG 247
++G+++AVD+WALG+L++E+ G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M+LE GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 178
Query: 61 GYVKLV 66
GY+K+
Sbjct: 179 GYIKVA 184
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 99/172 (57%), Gaps = 42/172 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF-------- 155
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
EYLH+ +++RDLKPENLL+D +GY+++ DF
Sbjct: 156 -EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDF 186
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GF+K + +TWT CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 187 GFAKRVK---GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 178
Query: 61 GYVKLV 66
GY+++
Sbjct: 179 GYIQVT 184
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 99/173 (57%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV--LTF------- 155
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENL++D +GY+K+ D
Sbjct: 156 --EYLHSLDLIYRDLKPENLMIDQQGYIKV----------------------------TD 185
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENL++D +
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ 178
Query: 61 GYVKLV 66
GY+K+
Sbjct: 179 GYIKVT 184
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 99/173 (57%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 90 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 140
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 141 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 170
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TWT CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 171 FGFAKRVK---GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 104 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 163
Query: 61 GYVKLV 66
GY+++
Sbjct: 164 GYIQVT 169
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 99/172 (57%), Gaps = 42/172 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF-------- 175
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
EYLH+ +++RDLKPENLL+D +GY+++ DF
Sbjct: 176 -EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDF 206
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GF+K + + TWT CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 207 GFAKRVKGA---TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 198
Query: 61 GYVKLV 66
GY+++
Sbjct: 199 GYIQVT 204
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+K+ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIKV----------------------------AD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+K+
Sbjct: 178 GYIKVA 183
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 155
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENL++D +GY+K+ D
Sbjct: 156 --EYLHSLDLIYRDLKPENLMIDQQGYIKV----------------------------TD 185
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENL++D +
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ 178
Query: 61 GYVKLV 66
GY+K+
Sbjct: 179 GYIKVT 184
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 101/172 (58%), Gaps = 42/172 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
R++ TF+D++ ++M+++ GGE++++LR+ F + A F A V C+ A
Sbjct: 70 RMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV---------CL--A 118
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
LEYLH++ I++RDLKPEN+LLD G++K+ DF
Sbjct: 119 LEYLHSKDIIYRDLKPENILLDKNGHIKI----------------------------TDF 150
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GF+K++ T+ CGTP+Y+APE++ + +++++D+W+ GIL++E+L G
Sbjct: 151 GFAKYVPDV---TYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M+++ GGE++++LR+ F + A F A V ALEYLH++ I++RDLKPEN+LLD
Sbjct: 83 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN 142
Query: 61 GYVKLVS 67
G++K+
Sbjct: 143 GHIKITD 149
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENL++D +GY+K+ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLMIDQQGYIKV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENL++D +
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ 177
Query: 61 GYVKLV 66
GY+K+
Sbjct: 178 GYIKVT 183
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 42/168 (25%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+FKD+ +YM++E GGE+++ LR F + A F A ++ L F EYL
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF---------EYL 158
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ +++RDLKPENLL+D +GY+++ DFGF+K
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDFGFAK 190
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 191 RVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 119 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 178
Query: 61 GYVKLV 66
GY+++
Sbjct: 179 GYIQVT 184
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 42/172 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF-------- 154
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
EYLH+ +++RDLKPENLL+D +GY+++ DF
Sbjct: 155 -EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDF 185
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 GFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 42/172 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF-------- 154
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
EYLH+ +++RDLKPENLL+D +GY+++ DF
Sbjct: 155 -EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDF 185
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 GFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 42/168 (25%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+FKD+ +YM++E GGE+++ LR F + A F A ++ L F EYL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF---------EYL 157
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ +++RDLKPENLL+D +GY+++ DFGF+K
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDFGFAK 189
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 190 RVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENL++D +GY+K+ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLMIDQQGYIKV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENL++D +
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ 177
Query: 61 GYVKLV 66
GY+K+
Sbjct: 178 GYIKVT 183
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 155
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 156 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 185
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 178
Query: 61 GYVKLV 66
GY+++
Sbjct: 179 GYIQVT 184
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 155
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 156 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 185
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 178
Query: 61 GYVKLV 66
GY+++
Sbjct: 179 GYIQVT 184
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 155
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 156 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 185
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 178
Query: 61 GYVKLV 66
GY+++
Sbjct: 179 GYIQVT 184
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 42/168 (25%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+FKD+ +YM++E GGE+++ LR F + A F A ++ L F EYL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF---------EYL 157
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ +++RDLKPENLL+D +GY+++ DFGF+K
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDFGFAK 189
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 190 RVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 42/168 (25%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+FKD+ +YM++E GGE+++ LR F + A F A ++ L F EYL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF---------EYL 157
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ +++RDLKPENLL+D +GY+++ DFGF+K
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDFGFAK 189
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 190 RVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 155
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 156 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 185
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 178
Query: 61 GYVKLV 66
GY+++
Sbjct: 179 GYIQVT 184
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 175
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 176 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 205
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 206 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 139 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 198
Query: 61 GYVKLV 66
GY+++
Sbjct: 199 GYIQVT 204
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 42/172 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV--LTF-------- 175
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
EYLH+ +++RDLKPENLL+D +GY+++ DF
Sbjct: 176 -EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDF 206
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 207 GFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 198
Query: 61 GYVKLV 66
GY+++
Sbjct: 199 GYIQVT 204
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 97 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 147
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 148 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 177
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 178 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 170
Query: 61 GYVKLV 66
GY+++
Sbjct: 171 GYIQVT 176
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 91 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 141
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 142 --EYLHSLDLIYRDLKPENLLIDEQGYIQV----------------------------TD 171
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 172 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 105 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQ 164
Query: 61 GYVKLV 66
GY+++
Sbjct: 165 GYIQVT 170
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 42/168 (25%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+FKD+ +YM++E GGE+++ LR F + A F A ++ L F EYL
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV--LTF---------EYL 152
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ +++RDLKPENLL+D +GY+++ DFGF+K
Sbjct: 153 HSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDFGFAK 184
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 RVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 113 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 172
Query: 61 GYVKLV 66
GY+++
Sbjct: 173 GYIQVT 178
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV--LTF------- 155
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 156 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 185
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 178
Query: 61 GYVKLV 66
GY+++
Sbjct: 179 GYIQVT 184
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 42/168 (25%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+FKD+ +YM++E GGE+++ LR F + A F A ++ L F EYL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV--LTF---------EYL 157
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ +++RDLKPENLL+D +GY+++ DFGF+K
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDFGFAK 189
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 190 RVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GG++++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+K+ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIKV----------------------------AD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GG++++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+K+
Sbjct: 178 GYIKVA 183
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GG++++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+K+ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIKV----------------------------AD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GG++++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+K+
Sbjct: 178 GYIKVA 183
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 98/172 (56%), Gaps = 42/172 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF-------- 154
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
EYLH+ +++RDLKPENL++D +GY+++ DF
Sbjct: 155 -EYLHSLDLIYRDLKPENLIIDQQGYIQV----------------------------TDF 185
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 GFAKRVK---GRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENL++D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENL++D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLMIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENL++D +
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 42/168 (25%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+FKD+ +YM++E GGE+++ LR F + A F A ++ L F EYL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF---------EYL 157
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ +++RDLKPENLL+D +GY+++ DFGF+K
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDFGFAK 189
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ +TW CGTPEY+APEII ++G+++AVD+WALG+L++++ G
Sbjct: 190 RVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 97 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV--LTF------- 147
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENLL+D +GY+++ D
Sbjct: 148 --EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TD 177
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FGF+K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 178 FGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 170
Query: 61 GYVKLV 66
GY+++
Sbjct: 171 GYIQVT 176
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 97/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENL++D +GY+K+ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLMIDQQGYIKV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG +K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGLAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENL++D +
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ 177
Query: 61 GYVKLV 66
GY+K+
Sbjct: 178 GYIKVT 183
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 42/168 (25%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+FKD+ +YM++E GGE+++ LR F + A F A ++ L F EYL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF---------EYL 157
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ +++RDLKPENLL+D +GY+++ DFGF+K
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDFGFAK 189
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ +TW CGTPEY+AP II ++G+++AVD+WALG+L++E+ G
Sbjct: 190 RVK---GRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 42/168 (25%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+FKD+ +YM++E GGE+++ LR F + A F A ++ L F EYL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF---------EYL 157
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ +++RDLKPENLL+D +GY+++ DFGF+K
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDFGFAK 189
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ +TW GTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 190 RVK---GRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 97/173 (56%), Gaps = 42/173 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF------- 154
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+ +++RDLKPENL++D +GY+++ D
Sbjct: 155 --EYLHSLDLIYRDLKPENLMIDQQGYIQV----------------------------TD 184
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG +K + +TW CGTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 185 FGLAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENL++D +
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 97/172 (56%), Gaps = 42/172 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L +FKD+ +YM++E GGE+++ LR F + A F A ++ L F
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF-------- 154
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
EYLH+ +++RDLKPENLL+D +GY+++ DF
Sbjct: 155 -EYLHSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDF 185
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GF+K + +TW CGTPE +APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 186 GFAKRVK---GRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 42/168 (25%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+FKD+ +YM++E GGE+++ LR F + A F A ++ L F EYL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV--LTF---------EYL 157
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ +++RDLKPENLL+D +GY+++ DFGF+K
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQV----------------------------TDFGFAK 189
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ +TW GTPEY+APEII ++G+++AVD+WALG+L++E+ G
Sbjct: 190 RVK---GRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE+++ LR F + A F A ++ EYLH+ +++RDLKPENLL+D +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177
Query: 61 GYVKLV 66
GY+++
Sbjct: 178 GYIQVT 183
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 91/168 (54%), Gaps = 39/168 (23%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
F+ +Y++LE GGE++ L F ++ TAC F A + AL +L
Sbjct: 89 AFQTGGKLYLILEYLSGGELFMQLEREGIFMED-----TAC------FYLAEISMALGHL 137
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H +GI++RDLKPEN++L+++G+VKL DFG K
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGHVKL----------------------------TDFGLCK 169
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
H G T TFCGT EY+APEI+ GH+RAVD+W+LG LM+++LTG
Sbjct: 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L F ++ A F A + AL +LH +GI++RDLKPEN++L+++
Sbjct: 98 LILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ 157
Query: 61 GYVKLV 66
G+VKL
Sbjct: 158 GHVKLT 163
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 90/168 (53%), Gaps = 39/168 (23%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
F+ +Y++LE GGE++ L F ++ TAC F A + AL +L
Sbjct: 89 AFQTGGKLYLILEYLSGGELFMQLEREGIFMED-----TAC------FYLAEISMALGHL 137
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H +GI++RDLKPEN++L+++G+VKL DFG K
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGHVKL----------------------------TDFGLCK 169
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
H G T FCGT EY+APEI+ GH+RAVD+W+LG LM+++LTG
Sbjct: 170 ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L F ++ A F A + AL +LH +GI++RDLKPEN++L+++
Sbjct: 98 LILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ 157
Query: 61 GYVKLV 66
G+VKL
Sbjct: 158 GHVKLT 163
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 39/172 (22%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L+ F+ +Y++L+ GG+++T L + F + E + F A + A
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE-----------EDVKFYLAELALA 139
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
L++LH+ GI++RDLKPEN+LLD G++KL DF
Sbjct: 140 LDHLHSLGIIYRDLKPENILLDEEGHIKL----------------------------TDF 171
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G SK K ++FCGT EY+APE++ RGH ++ D+W+ G+LM E+LTG
Sbjct: 172 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++L+ GG+++T L + F + F A + AL++LH+ GI++RDLKPEN+LLD
Sbjct: 104 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE 163
Query: 61 GYVKLV 66
G++KL
Sbjct: 164 GHIKLT 169
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 39/172 (22%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L+ F+ +Y++L+ GG+++T L + F + F A + ALD
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD--------- 140
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+LH+ GI++RDLKPEN+LLD G++KL DF
Sbjct: 141 --HLHSLGIIYRDLKPENILLDEEGHIKL----------------------------TDF 170
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G SK K ++FCGT EY+APE++ RGH ++ D+W+ G+LM E+LTG
Sbjct: 171 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++L+ GG+++T L + F + F A + AL++LH+ GI++RDLKPEN+LLD
Sbjct: 103 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE 162
Query: 61 GYVKLV 66
G++KL
Sbjct: 163 GHIKLT 168
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 39/172 (22%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L+ F+ +Y++L+ GG+++T L + F + F A + ALD
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD--------- 140
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+LH+ GI++RDLKPEN+LLD G++KL DF
Sbjct: 141 --HLHSLGIIYRDLKPENILLDEEGHIKL----------------------------TDF 170
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G SK K ++FCGT EY+APE++ RGH ++ D+W+ G+LM E+LTG
Sbjct: 171 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++L+ GG+++T L + F + F A + AL++LH+ GI++RDLKPEN+LLD
Sbjct: 103 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE 162
Query: 61 GYVKLV 66
G++KL
Sbjct: 163 GHIKLT 168
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 39/172 (22%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L+ F+ +Y++L+ GG+++T L + F + E + F A +
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE-----------EDVKFYLAELALG 142
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
L++LH+ GI++RDLKPEN+LLD G++KL DF
Sbjct: 143 LDHLHSLGIIYRDLKPENILLDEEGHIKL----------------------------TDF 174
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G SK K ++FCGT EY+APE++ +GH + D+W+ G+LM E+LTG
Sbjct: 175 GLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++L+ GG+++T L + F + F A + L++LH+ GI++RDLKPEN+LLD
Sbjct: 107 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEE 166
Query: 61 GYVKLV 66
G++KL
Sbjct: 167 GHIKLT 172
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 96/195 (49%), Gaps = 48/195 (24%)
Query: 54 NLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNA 113
N+LL N + LV L+ +F+ + +Y +L+ GGE++ L+ CF +
Sbjct: 90 NVLLKNVKHPFLVG---------LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR 140
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
A F A + AL YLH+ IV+RDLKPEN+LLD++G++ L
Sbjct: 141 ARFYAAEIASALG-----------YLHSLNIVYRDLKPENILLDSQGHIVL--------- 180
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVD 233
DFG K T TFCGTPEY+APE++ + +DR VD
Sbjct: 181 -------------------TDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVD 221
Query: 234 YWALGILMHELLTGM 248
+W LG +++E+L G+
Sbjct: 222 WWCLGAVLYEMLYGL 236
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+L+ GGE++ L+ CF + A F A + AL YLH+ IV+RDLKPEN+LLD++G
Sbjct: 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG 176
Query: 62 YVKLV 66
++ L
Sbjct: 177 HIVLT 181
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 42/174 (24%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
L+ F+ ++++L+ GGE++T L +R F ++ + ++ AL
Sbjct: 124 LHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE-----------VQIYVGEIVLAL 172
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
E+LH GI++RD+K EN+LLD+ G+V L DFG
Sbjct: 173 EHLHKLGIIYRDIKLENILLDSNGHVVL----------------------------TDFG 204
Query: 197 FSKH-LGHSGCKTWTFCGTPEYVAPEIIK--NRGHDRAVDYWALGILMHELLTG 247
SK + + + FCGT EY+AP+I++ + GHD+AVD+W+LG+LM+ELLTG
Sbjct: 205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++L+ GGE++T L +R F ++ ++ ALE+LH GI++RD+K EN+LLD+
Sbjct: 136 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN 195
Query: 61 GYVKLV 66
G+V L
Sbjct: 196 GHVVLT 201
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 39/173 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T L F+ + ++E GGE++ L F + A F A ++ AL
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL--------- 121
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+R +V+RD+K ENL+LD G++K+ D
Sbjct: 122 --EYLHSRDVVYRDIKLENLMLDKDGHIKI----------------------------TD 151
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG K G TFCGTPEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 152 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 204
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GGE++ L F + A F A ++ ALEYLH+R +V+RD+K ENL+LD G
Sbjct: 86 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 145
Query: 62 YVKLVS 67
++K+
Sbjct: 146 HIKITD 151
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE GEV+ L++ + FD+ A++IT
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT 120
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 121 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 154
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 155 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 199 VLCYEFLVGKPPFEANTYQ 217
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE GEV+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 90 LILEYAPRGEVYKELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 148
Query: 60 RGYVKLV 66
G +K+
Sbjct: 149 AGELKIA 155
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 39/173 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T L F+ + ++E GGE++ L F + A F A ++ AL
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL--------- 118
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+R +V+RD+K ENL+LD G++K+ D
Sbjct: 119 --EYLHSRDVVYRDIKLENLMLDKDGHIKI----------------------------TD 148
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG K G TFCGTPEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 149 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GGE++ L F + A F A ++ ALEYLH+R +V+RD+K ENL+LD G
Sbjct: 83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 142
Query: 62 YVKLVS 67
++K+
Sbjct: 143 HIKITD 148
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 39/173 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T L F+ + ++E GGE++ L F + A F A ++ AL
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL--------- 118
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+R +V+RD+K ENL+LD G++K+ D
Sbjct: 119 --EYLHSRDVVYRDIKLENLMLDKDGHIKI----------------------------TD 148
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG K G TFCGTPEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 149 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GGE++ L F + A F A ++ ALEYLH+R +V+RD+K ENL+LD G
Sbjct: 83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 142
Query: 62 YVKLVS 67
++K+
Sbjct: 143 HIKITD 148
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 39/173 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+L+ F+ ++ ++E GG++ +++ FD+ A F A +I AL F
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF------- 139
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
LH +GI++RDLK +N+LLD+ G+ KL D
Sbjct: 140 ----LHDKGIIYRDLKLDNVLLDHEGHCKL----------------------------AD 167
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG K +G T TFCGTP+Y+APEI++ + AVD+WA+G+L++E+L G
Sbjct: 168 FGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GG++ +++ FD+ A F A +I AL +LH +GI++RDLK +N+LLD+ G
Sbjct: 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG 161
Query: 62 YVKLVS 67
+ KL
Sbjct: 162 HCKLAD 167
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 39/173 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T L F+ + ++E GGE++ L F + A F A ++ AL
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL--------- 118
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+R +V+RD+K ENL+LD G++K+ D
Sbjct: 119 --EYLHSRDVVYRDIKLENLMLDKDGHIKI----------------------------TD 148
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG K G FCGTPEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 149 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GGE++ L F + A F A ++ ALEYLH+R +V+RD+K ENL+LD G
Sbjct: 83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 142
Query: 62 YVKLVS 67
++K+
Sbjct: 143 HIKITD 148
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 39/173 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T L F+ + ++E GGE++ L F + A F A ++ AL
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL--------- 123
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+R +V+RD+K ENL+LD G++K+ D
Sbjct: 124 --EYLHSRDVVYRDIKLENLMLDKDGHIKI----------------------------TD 153
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG K G FCGTPEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 154 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GGE++ L F + A F A ++ ALEYLH+R +V+RD+K ENL+LD G
Sbjct: 88 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 147
Query: 62 YVKLVS 67
++K+
Sbjct: 148 HIKITD 153
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 39/173 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T L F+ + ++E GGE++ L F + A F A ++ AL
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL--------- 118
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+R +V+RD+K ENL+LD G++K+ D
Sbjct: 119 --EYLHSRDVVYRDIKLENLMLDKDGHIKI----------------------------TD 148
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG K G FCGTPEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 149 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GGE++ L F + A F A ++ ALEYLH+R +V+RD+K ENL+LD G
Sbjct: 83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 142
Query: 62 YVKLVS 67
++K+
Sbjct: 143 HIKITD 148
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 39/173 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T L F+ + ++E GGE++ L F + A F A ++ AL
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL--------- 118
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
EYLH+R +V+RD+K ENL+LD G++K+ D
Sbjct: 119 --EYLHSRDVVYRDIKLENLMLDKDGHIKI----------------------------TD 148
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG K G FCGTPEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 149 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GGE++ L F + A F A ++ ALEYLH+R +V+RD+K ENL+LD G
Sbjct: 83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 142
Query: 62 YVKLVS 67
++K+
Sbjct: 143 HIKITD 148
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 40/174 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T L +F+ + ++E GGE++ L F ++ A F A ++ ALD
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD-------- 262
Query: 135 ALEYLHT-RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
YLH+ + +V+RDLK ENL+LD G++K+
Sbjct: 263 ---YLHSEKNVVYRDLKLENLMLDKDGHIKI----------------------------T 291
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
DFG K G TFCGTPEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 292 DFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHT-RGIVFRDLKPENLLLDNR 60
++E GGE++ L F ++ A F A ++ AL+YLH+ + +V+RDLK ENL+LD
Sbjct: 226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD 285
Query: 61 GYVKLV 66
G++K+
Sbjct: 286 GHIKIT 291
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 40/174 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T L +F+ + ++E GGE++ L F ++ A F A ++ ALD
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD-------- 265
Query: 135 ALEYLHT-RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
YLH+ + +V+RDLK ENL+LD G++K+
Sbjct: 266 ---YLHSEKNVVYRDLKLENLMLDKDGHIKI----------------------------T 294
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
DFG K G TFCGTPEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 295 DFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHT-RGIVFRDLKPENLLLDNR 60
++E GGE++ L F ++ A F A ++ AL+YLH+ + +V+RDLK ENL+LD
Sbjct: 229 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD 288
Query: 61 GYVKLV 66
G++K+
Sbjct: 289 GHIKIT 294
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT 119
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 120 E------------LANALSYCHSKRVIHRDIKPENLLLGSNGELKI-------------- 153
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 154 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L GM E++ +Q
Sbjct: 198 VLCYEFLVGMPPFEAHTYQ 216
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE G V+ L++ + FD+ + + AL Y H++ ++ RD+KPENLLL +
Sbjct: 89 LILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSN 148
Query: 61 GYVKLV 66
G +K+
Sbjct: 149 GELKIA 154
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 141
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 142 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 175
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 176 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 219
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 220 VLCYEFLVGKPPFEANTYQ 238
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 111 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 169
Query: 60 RGYVKLV 66
G +K+
Sbjct: 170 AGELKIA 176
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 121 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 154
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 155 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 199 VLCYEFLVGKPPFEANTYQ 217
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 90 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 148
Query: 60 RGYVKLV 66
G +K+
Sbjct: 149 AGELKIA 155
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT 119
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 120 E------------LANALSYCHSKRVIHRDIKPENLLLGSNGELKI-------------- 153
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 154 --------------ADFGWSVHAPSS--RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L GM E++ +Q
Sbjct: 198 VLCYEFLVGMPPFEAHTYQ 216
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE G V+ L++ + FD+ + + AL Y H++ ++ RD+KPENLLL +
Sbjct: 89 LILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSN 148
Query: 61 GYVKLV 66
G +K+
Sbjct: 149 GELKIA 154
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 116 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 149
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 150 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 194 VLCYEFLVGKPPFEANTYQ 212
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 85 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 60 RGYVKLV 66
G +K+
Sbjct: 144 AGELKIA 150
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 73 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 132
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 133 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 166
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 167 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 210
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 211 VLCYEFLVGKPPFEANTYQ 229
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 102 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 160
Query: 60 RGYVKLV 66
G +K+
Sbjct: 161 AGELKIA 167
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 119 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 152
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 153 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 197 VLCYEFLVGKPPFEANTYQ 215
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 88 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 60 RGYVKLV 66
G +K+
Sbjct: 147 AGELKIA 153
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 119
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 120 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 153
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 154 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 198 VLCYEFLVGKPPFEANTYQ 216
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 89 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 147
Query: 60 RGYVKLV 66
G +K+
Sbjct: 148 AGELKIA 154
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 53 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 112
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 113 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 146
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 147 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 190
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 191 VLCYEFLVGKPPFEANTYQ 209
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE G V+ L++ + FD+ + + AL Y H++ ++ RD+KPENLLL +
Sbjct: 82 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 141
Query: 61 GYVKLV 66
G +K+
Sbjct: 142 GELKIA 147
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 119 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 152
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 153 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 197 VLCYEFLVGKPPFEANTYQ 215
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 88 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 60 RGYVKLV 66
G +K+
Sbjct: 147 AGELKIA 153
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 41/172 (23%)
Query: 77 LYKTFKDSKYVYMLLEACLGGE-VWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L+ F+ ++ ++E GG+ ++ + R+R +++A F +A + A
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR------------FYSAEISLA 165
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
L YLH RGI++RDLK +N+LLD+ G++KL D+
Sbjct: 166 LNYLHERGIIYRDLKLDNVLLDSEGHIKL----------------------------TDY 197
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G K G T TFCGTP Y+APEI++ + +VD+WALG+LM E++ G
Sbjct: 198 GMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GG++ ++ + + A F +A + AL YLH RGI++RDLK +N+LLD+ G
Sbjct: 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 190
Query: 62 YVKLV 66
++KL
Sbjct: 191 HIKLT 195
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 55 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 114
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 115 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 148
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 149 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 192
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 193 VLCYEFLVGKPPFEANTYQ 211
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 84 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 142
Query: 60 RGYVKLV 66
G +K+
Sbjct: 143 AGELKIA 149
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F DS VY++LE G V+ L++ + FD+ A++IT
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 116 E------------LANALSYCHSKKVIHRDIKPENLLLGSAGELKI-------------- 149
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 150 --------------ADFGWSVHAPSS--RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 194 VLCYEFLVGKPPFEANTYQ 212
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 85 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKKVIHRDIKPENLLLGS 143
Query: 60 RGYVKLV 66
G +K+
Sbjct: 144 AGELKIA 150
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 116
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 117 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 150
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 151 --------------ADFGWSVHAPSS--RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 195 VLCYEFLVGKPPFEANTYQ 213
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 86 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 144
Query: 60 RGYVKLV 66
G +K+
Sbjct: 145 AGELKIA 151
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 45/213 (21%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACL 95
A++ L IV +D + + L +NR ++ + T L +F+ + ++E
Sbjct: 37 AMKILKKEVIVAKD-EVAHTLTENR----VLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 91
Query: 96 GGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHT-RGIVFRDLKPENL 154
GGE++ L F ++ A F A ++ ALD YLH+ + +V+RDLK ENL
Sbjct: 92 GGELFFHLSRERVFSEDRARFYGAEIVSALD-----------YLHSEKNVVYRDLKLENL 140
Query: 155 LLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGT 214
+LD G++K+ DFG K G FCGT
Sbjct: 141 MLDKDGHIKI----------------------------TDFGLCKEGIKDGATMKXFCGT 172
Query: 215 PEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
PEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 205
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHT-RGIVFRDLKPENLLLDNR 60
++E GGE++ L F ++ A F A ++ AL+YLH+ + +V+RDLK ENL+LD
Sbjct: 86 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD 145
Query: 61 GYVKLV 66
G++K+
Sbjct: 146 GHIKIT 151
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 45/213 (21%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACL 95
A++ L IV +D + + L +NR ++ + T L +F+ + ++E
Sbjct: 38 AMKILKKEVIVAKD-EVAHTLTENR----VLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 92
Query: 96 GGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHT-RGIVFRDLKPENL 154
GGE++ L F ++ A F A ++ ALD YLH+ + +V+RDLK ENL
Sbjct: 93 GGELFFHLSRERVFSEDRARFYGAEIVSALD-----------YLHSEKNVVYRDLKLENL 141
Query: 155 LLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGT 214
+LD G++K+ DFG K G FCGT
Sbjct: 142 MLDKDGHIKI----------------------------TDFGLCKEGIKDGATMKXFCGT 173
Query: 215 PEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
PEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHT-RGIVFRDLKPENLLLDNR 60
++E GGE++ L F ++ A F A ++ AL+YLH+ + +V+RDLK ENL+LD
Sbjct: 87 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD 146
Query: 61 GYVKLV 66
G++K+
Sbjct: 147 GHIKIT 152
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 121 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 154
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T CGT +Y+ PE I+ R HD VD W+LG
Sbjct: 155 --------------ADFGWSVHAPSS--RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLG 198
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 199 VLCYEFLVGKPPFEANTYQ 217
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 90 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 148
Query: 60 RGYVKLV 66
G +K+
Sbjct: 149 AGELKIA 155
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 45/213 (21%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACL 95
A++ L IV +D + + L +NR ++ + T L +F+ + ++E
Sbjct: 39 AMKILKKEVIVAKD-EVAHTLTENR----VLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 93
Query: 96 GGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHT-RGIVFRDLKPENL 154
GGE++ L F ++ A F A ++ ALD YLH+ + +V+RDLK ENL
Sbjct: 94 GGELFFHLSRERVFSEDRARFYGAEIVSALD-----------YLHSEKNVVYRDLKLENL 142
Query: 155 LLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGT 214
+LD G++K+ DFG K G FCGT
Sbjct: 143 MLDKDGHIKI----------------------------TDFGLCKEGIKDGATMKXFCGT 174
Query: 215 PEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
PEY+APE++++ + RAVD+W LG++M+E++ G
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 207
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHT-RGIVFRDLKPENLLLDNR 60
++E GGE++ L F ++ A F A ++ AL+YLH+ + +V+RDLK ENL+LD
Sbjct: 88 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD 147
Query: 61 GYVKLVS 67
G++K+
Sbjct: 148 GHIKITD 154
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 119 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 152
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 153 --------------ADFGWSVHAPSS--RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 197 VLCYEFLVGKPPFEANTYQ 215
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 88 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 60 RGYVKLV 66
G +K+
Sbjct: 147 AGELKIA 153
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 58 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 117
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 118 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 151
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
+FG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 152 --------------ANFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 195
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 196 VLCYEFLVGKPPFEANTYQ 214
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 87 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 145
Query: 60 RGYVKLVS 67
G +K+ +
Sbjct: 146 AGELKIAN 153
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 116 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 149
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 150 --------------ADFGWSVHAPSS--RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 194 VLCYEFLVGKPPFEANTYQ 212
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 85 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 60 RGYVKLV 66
G +K+
Sbjct: 144 AGELKIA 150
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 39/173 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T ++ TF+ + ++ ++E GG++ ++ FD + A+F A +I L F
Sbjct: 81 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF------- 133
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
LH++GIV+RDLK +N+LLD G++K+ D
Sbjct: 134 ----LHSKGIVYRDLKLDNILLDKDGHIKI----------------------------AD 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG K KT FCGTP+Y+APEI+ + ++ +VD+W+ G+L++E+L G
Sbjct: 162 FGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GG++ ++ FD + A+F A +I L++LH++GIV+RDLK +N+LLD G
Sbjct: 96 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG 155
Query: 62 YVKLVS 67
++K+
Sbjct: 156 HIKIAD 161
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 119 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 152
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
+FG+S H S + T CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 153 --------------ANFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 197 VLCYEFLVGKPPFEANTYQ 215
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 88 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 60 RGYVKLVS 67
G +K+ +
Sbjct: 147 AGELKIAN 154
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 58 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 117
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 118 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 151
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 152 --------------ADFGWSVHAPSS--RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 195
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 196 VLCYEFLVGKPPFEANTYQ 214
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 87 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 145
Query: 60 RGYVKLV 66
G +K+
Sbjct: 146 AGELKIA 152
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 39/173 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T ++ TF+ + ++ ++E GG++ ++ FD + A+F A +I L F
Sbjct: 82 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF------- 134
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
LH++GIV+RDLK +N+LLD G++K+ D
Sbjct: 135 ----LHSKGIVYRDLKLDNILLDKDGHIKI----------------------------AD 162
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG K KT FCGTP+Y+APEI+ + ++ +VD+W+ G+L++E+L G
Sbjct: 163 FGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 215
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GG++ ++ FD + A+F A +I L++LH++GIV+RDLK +N+LLD G
Sbjct: 97 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG 156
Query: 62 YVKLVS 67
++K+
Sbjct: 157 HIKIAD 162
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 116 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 149
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 150 --------------ADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 194 VLCYEFLVGKPPFEANTYQ 212
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 85 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 60 RGYVKLV 66
G +K+
Sbjct: 144 AGELKIA 150
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 116 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 149
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 150 --------------ADFGWSVHAPSS--RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 194 VLCYEFLVGKPPFEANTYQ 212
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 85 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 60 RGYVKLV 66
G +K+
Sbjct: 144 AGELKIA 150
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 116 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 149
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 150 --------------ADFGWSVHAPSS--RRTELCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 194 VLCYEFLVGKPPFEANTYQ 212
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 85 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 60 RGYVKLV 66
G +K+
Sbjct: 144 AGELKIA 150
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 119 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 152
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 153 --------------ADFGWSVHAPSS--RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 197 VLCYEFLVGKPPFEANTYQ 215
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 88 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 60 RGYVKLV 66
G +K+
Sbjct: 147 AGELKIA 153
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 116 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 149
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 150 --------------ADFGWSVHAPSS--RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 194 VLCYEFLVGKPPFEANTYQ 212
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE G V+ L++ + FD+ + + AL Y H++ ++ RD+KPENLLL +
Sbjct: 85 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 144
Query: 61 GYVKLV 66
G +K+
Sbjct: 145 GELKIA 150
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 116
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 117 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 150
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 151 --------------ADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 195 VLCYEFLVGKPPFEANTYQ 213
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 86 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 144
Query: 60 RGYVKLV 66
G +K+
Sbjct: 145 AGELKIA 151
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 41/172 (23%)
Query: 77 LYKTFKDSKYVYMLLEACLGGE-VWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L+ F+ ++ ++E GG+ ++ + R+R +++A F +A + A
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR------------FYSAEISLA 133
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
L YLH RGI++RDLK +N+LLD+ G++KL D+
Sbjct: 134 LNYLHERGIIYRDLKLDNVLLDSEGHIKL----------------------------TDY 165
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G K G T FCGTP Y+APEI++ + +VD+WALG+LM E++ G
Sbjct: 166 GMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 217
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GG++ ++ + + A F +A + AL YLH RGI++RDLK +N+LLD+ G
Sbjct: 99 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 158
Query: 62 YVKLV 66
++KL
Sbjct: 159 HIKLT 163
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 116 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 149
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 150 --------------ADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 194 VLCYEFLVGKPPFEANTYQ 212
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 85 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 143
Query: 60 RGYVKLV 66
G +K+
Sbjct: 144 AGELKIA 150
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 45/187 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+L+ F+ +Y ++E GG++ +++ F + A F A + L F
Sbjct: 83 TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFF------- 135
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
LH RGI++RDLK +N++LD+ G++K+ D
Sbjct: 136 ----LHKRGIIYRDLKLDNVMLDSEGHIKI----------------------------AD 163
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMK----- 249
FG K G T FCGTP+Y+APEII + + ++VD+WA G+L++E+L G
Sbjct: 164 FGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 223
Query: 250 -ESNVFQ 255
E +FQ
Sbjct: 224 DEDELFQ 230
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GG++ +++ F + A F A + L +LH RGI++RDLK +N++LD+ G
Sbjct: 98 VMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEG 157
Query: 62 YVKLVS 67
++K+
Sbjct: 158 HIKIAD 163
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 121 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 154
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 155 --------------ADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 199 VLCYEFLVGKPPFEANTYQ 217
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 90 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 148
Query: 60 RGYVKLV 66
G +K+
Sbjct: 149 AGELKIA 155
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE GEV+ L++ + FD+ A++IT
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT 120
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 121 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 154
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + GT +Y+ PE+I+ R HD VD W+LG
Sbjct: 155 --------------ADFGWSVHAPSS--RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 199 VLCYEFLVGKPPFEANTYQ 217
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE GEV+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 90 LILEYAPRGEVYKELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 148
Query: 60 RGYVKLV 66
G +K+
Sbjct: 149 AGELKIA 155
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 41/172 (23%)
Query: 77 LYKTFKDSKYVYMLLEACLGGE-VWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L+ F+ ++ ++E GG+ ++ + R+R +++A F +A + A
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR------------FYSAEISLA 118
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
L YLH RGI++RDLK +N+LLD+ G++KL D+
Sbjct: 119 LNYLHERGIIYRDLKLDNVLLDSEGHIKL----------------------------TDY 150
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G K G T FCGTP Y+APEI++ + +VD+WALG+LM E++ G
Sbjct: 151 GMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 202
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GG++ ++ + + A F +A + AL YLH RGI++RDLK +N+LLD+ G
Sbjct: 84 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 143
Query: 62 YVKLVS 67
++KL
Sbjct: 144 HIKLTD 149
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 41/172 (23%)
Query: 77 LYKTFKDSKYVYMLLEACLGGE-VWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L+ F+ ++ ++E GG+ ++ + R+R +++A F +A + A
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR------------FYSAEISLA 122
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
L YLH RGI++RDLK +N+LLD+ G++KL D+
Sbjct: 123 LNYLHERGIIYRDLKLDNVLLDSEGHIKL----------------------------TDY 154
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G K G T FCGTP Y+APEI++ + +VD+WALG+LM E++ G
Sbjct: 155 GMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GG++ ++ + + A F +A + AL YLH RGI++RDLK +N+LLD+ G
Sbjct: 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 147
Query: 62 YVKLVS 67
++KL
Sbjct: 148 HIKLTD 153
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 141
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 142 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 175
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 176 --------------ADFGWSVHAPSS--RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 219
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 220 VLCYEFLVGKPPFEANTYQ 238
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 111 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 169
Query: 60 RGYVKLV 66
G +K+
Sbjct: 170 AGELKIA 176
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 119 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 152
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + CGT +Y+ PE+I+ R HD VD W+LG
Sbjct: 153 --------------ADFGWSVHAPSS--RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 197 VLCYEFLVGKPPFEANTYQ 215
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 88 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 146
Query: 60 RGYVKLV 66
G +K+
Sbjct: 147 AGELKIA 153
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 45/199 (22%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDN-AASFIT 118
R V++ S + RLY F D+ VY++LE G V+ L++ + FD+ A++IT
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 116
Query: 119 ACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
+ AL Y H++ ++ RD+KPENLLL + G +K+
Sbjct: 117 E------------LANALSYCHSKRVIHRDIKPENLLLGSAGELKI-------------- 150
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
DFG+S H S + T GT +Y+ PE+I+ R HD VD W+LG
Sbjct: 151 --------------ADFGWSCHAPSS--RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 239 ILMHELLTGMK--ESNVFQ 255
+L +E L G E+N +Q
Sbjct: 195 VLCYEFLVGKPPFEANTYQ 213
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MLLEACLGGEVWTILRERTCFDDN-AASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE G V+ L++ + FD+ A++IT + AL Y H++ ++ RD+KPENLLL +
Sbjct: 86 LILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSKRVIHRDIKPENLLLGS 144
Query: 60 RGYVKLV 66
G +K+
Sbjct: 145 AGELKIA 151
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 41/189 (21%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITA 119
R +++ S + R+Y F D K +Y++LE GE++ L++ FD+ +A
Sbjct: 62 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR----SA 117
Query: 120 CVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAK 179
+E L +AL Y H R ++ RD+KPENLL+ +G +K+
Sbjct: 118 TFMEEL-------ADALHYCHERKVIHRDIKPENLLMGYKGELKI--------------- 155
Query: 180 GDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGI 239
DFG+S H + CGT +Y+ PE+I+ + HD VD W G+
Sbjct: 156 -------------ADFGWSVHA--PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 200
Query: 240 LMHELLTGM 248
L +E L GM
Sbjct: 201 LCYEFLVGM 209
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GE++ L++ FD+ ++ + +AL Y H R ++ RD+KPENLL+ +
Sbjct: 91 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK 150
Query: 61 GYVKLV 66
G +K+
Sbjct: 151 GELKIA 156
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 41/189 (21%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITA 119
R +++ S + R+Y F D K +Y++LE GE++ L++ FD+ +A
Sbjct: 62 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR----SA 117
Query: 120 CVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAK 179
+E L +AL Y H R ++ RD+KPENLL+ +G +K+
Sbjct: 118 TFMEEL-------ADALHYCHERKVIHRDIKPENLLMGYKGELKI--------------- 155
Query: 180 GDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGI 239
DFG+S H + CGT +Y+ PE+I+ + HD VD W G+
Sbjct: 156 -------------ADFGWSVHA--PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 200
Query: 240 LMHELLTGM 248
L +E L GM
Sbjct: 201 LCYEFLVGM 209
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GE++ L++ FD+ ++ + +AL Y H R ++ RD+KPENLL+ +
Sbjct: 91 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK 150
Query: 61 GYVKLV 66
G +K+
Sbjct: 151 GELKIA 156
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 41/189 (21%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITA 119
R +++ S + R+Y F D K +Y++LE GE++ L++ FD+ +A
Sbjct: 63 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR----SA 118
Query: 120 CVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAK 179
+E L +AL Y H R ++ RD+KPENLL+ +G +K+
Sbjct: 119 TFMEEL-------ADALHYCHERKVIHRDIKPENLLMGYKGELKI--------------- 156
Query: 180 GDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGI 239
DFG+S H + CGT +Y+ PE+I+ + HD VD W G+
Sbjct: 157 -------------ADFGWSVHA--PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 201
Query: 240 LMHELLTGM 248
L +E L GM
Sbjct: 202 LCYEFLVGM 210
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GE++ L++ FD+ ++ + +AL Y H R ++ RD+KPENLL+ +
Sbjct: 92 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK 151
Query: 61 GYVKLV 66
G +K+
Sbjct: 152 GELKIA 157
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 152
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 153 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 184
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGL 231
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 9 GEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQIT 174
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 39/173 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+L+ F+ +Y ++E GG++ +++ F + A F A + L F
Sbjct: 84 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF------- 136
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
L ++GI++RDLK +N++LD+ G++K+ D
Sbjct: 137 ----LQSKGIIYRDLKLDNVMLDSEGHIKI----------------------------AD 164
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG K G T FCGTP+Y+APEII + + ++VD+WA G+L++E+L G
Sbjct: 165 FGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 217
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 41/66 (62%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GG++ +++ F + A F A + L +L ++GI++RDLK +N++LD+ G
Sbjct: 99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG 158
Query: 62 YVKLVS 67
++K+
Sbjct: 159 HIKIAD 164
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 47 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 104
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 105 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 153
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 154 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 185
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ +F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 186 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 232
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 9 GEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS- 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 118 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 177
Query: 68 -----RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 178 GTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 221
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 43 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 100
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 101 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 149
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 150 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 181
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ +F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 182 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 228
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 113 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 172
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 173 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 217
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 81/186 (43%), Gaps = 40/186 (21%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERT-CFDDNAASFITACV 121
VK+ + K LY F+DS YVY++LE C GE+ L+ R F +N
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN--------- 112
Query: 122 IEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
EA F+ +I + YLH+ GI+ RDL NLLL +K+
Sbjct: 113 -EARHFMHQ-IITGMLYLHSHGILHRDLTLSNLLLTRNMNIKI----------------- 153
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
DFG + L K +T CGTP Y++PEI H D W+LG +
Sbjct: 154 -----------ADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMF 202
Query: 242 HELLTG 247
+ LL G
Sbjct: 203 YTLLIG 208
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 17/157 (10%)
Query: 1 MLLEACLGGEVWTILRERT-CFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++LE C GE+ L+ R F +N A +I + YLH+ GI+ RDL NLLL
Sbjct: 88 LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR 147
Query: 60 RGYVKL----VSRKKKTRQTRLYKTFKDSKYVYMLLEA-----------CLGGEVWTILR 104
+K+ ++ + K + Y Y+ + LG +T+L
Sbjct: 148 NMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLI 207
Query: 105 ERTCFD-DNAASFITACVIEALDFITACVIEALEYLH 140
R FD D + + V+ + + IEA + +H
Sbjct: 208 GRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIH 244
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 44 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 101
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 102 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 150
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 151 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 182
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 183 ESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 114 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 174 FGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWAL 218
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 152
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 153 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 184
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 116 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 176 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 152
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 153 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 184
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 9 GEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS- 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Query: 68 -----RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 177 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 44 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 101
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 102 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 150
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 151 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 182
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 114 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 174 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 49 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 106
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 107 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 155
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 156 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 187
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 188 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 234
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 9 GEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS- 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 120 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 179
Query: 68 -----RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 180 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 223
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 39/174 (22%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+L+ F+ +Y ++E GG++ +++ F + A F A + L F
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF------- 457
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
L ++GI++RDLK +N++LD+ G++K+ D
Sbjct: 458 ----LQSKGIIYRDLKLDNVMLDSEGHIKI----------------------------AD 485
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
FG K G T FCGTP+Y+APEII + + ++VD+WA G+L++E+L G
Sbjct: 486 FGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 41/65 (63%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
++E GG++ +++ F + A F A + L +L ++GI++RDLK +N++LD+ G
Sbjct: 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG 479
Query: 62 YVKLV 66
++K+
Sbjct: 480 HIKIA 484
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 43 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 100
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 101 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 149
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 150 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 181
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 182 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 228
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 113 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 172
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 173 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 217
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 152
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 153 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 184
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 9 GEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS- 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Query: 68 -----RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 177 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 47 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 104
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 105 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 153
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 154 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 185
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 186 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 232
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 9 GEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS- 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 118 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 177
Query: 68 -----RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 178 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 221
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 44 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 101
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 102 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 150
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 151 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 182
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 114 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 174 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 28 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 85
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 86 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 134
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 135 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 166
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 167 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 213
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 98 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 157
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 158 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 202
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 152
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 153 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 184
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 231
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 116 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 176 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 22 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 79
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 80 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 128
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 129 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 160
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 161 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 207
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 92 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 151
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 152 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 196
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 23 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 80
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 81 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 129
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 130 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 161
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 162 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 208
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 93 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 152
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 153 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 197
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 21 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 78
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 79 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 127
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 128 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 159
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 160 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 206
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 91 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 150
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 151 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 195
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 24 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 81
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 82 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 130
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 131 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 162
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 163 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 209
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 94 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 153
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 154 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 198
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 35/171 (20%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
L + D KYVY++ E GGE+ + + F + AS + L IT V
Sbjct: 81 LKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAV-------LFTITKTV---- 129
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
EYLH +G+V RDLKP N+L + E +S I DFG
Sbjct: 130 EYLHAQGVVHRDLKPSNILY-----------------VDESGNPESIRI-------CDFG 165
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
F+K L T C T +VAPE+++ +G+D A D W+LG+L++ +LTG
Sbjct: 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL-LDN 59
++ E GGE+ + + F + AS + + + +EYLH +G+V RDLKP N+L +D
Sbjct: 93 VVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDE 152
Query: 60 RG 61
G
Sbjct: 153 SG 154
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY TF+D
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L G + +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 104 DEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 152
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 153 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 184
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ +F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 185 ESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGL 231
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 15 LRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 123 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQIT 174
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 45/177 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L+ F+D +Y+YM++E GG++ ++ + A F TA V+ A
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR------------FYTAEVVLA 185
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
L+ +H+ G + RD+KP+N+LLD G++KL DF
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKL----------------------------ADF 217
Query: 196 GFSKHLGHSG-CKTWTFCGTPEYVAPEIIKNRGHD----RAVDYWALGILMHELLTG 247
G + G + T GTP+Y++PE++K++G D R D+W++G+ ++E+L G
Sbjct: 218 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GG++ ++ + A F TA V+ AL+ +H+ G + RD+KP+N+LLD
Sbjct: 151 MVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 209
Query: 61 GYVKLVS 67
G++KL
Sbjct: 210 GHLKLAD 216
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 45/177 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L+ F+D +Y+YM++E GG++ ++ + A F TA V+ A
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR------------FYTAEVVLA 180
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
L+ +H+ G + RD+KP+N+LLD G++KL DF
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLDKSGHLKL----------------------------ADF 212
Query: 196 GFSKHLGHSG-CKTWTFCGTPEYVAPEIIKNRGHD----RAVDYWALGILMHELLTG 247
G + G + T GTP+Y++PE++K++G D R D+W++G+ ++E+L G
Sbjct: 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GG++ ++ + A F TA V+ AL+ +H+ G + RD+KP+N+LLD
Sbjct: 146 MVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 204
Query: 61 GYVKLVS 67
G++KL
Sbjct: 205 GHLKLAD 211
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 52/232 (22%)
Query: 26 ASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLY 78
SF T + A E +R + L+ +++ +N+ V V+R++ +LY
Sbjct: 41 GSFSTTVL--ARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLY 96
Query: 79 KTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEY 138
TF+D + +Y L GE+ +R+ FD+ F TA ++ AL EY
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EY 145
Query: 139 LHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFS 198
LH +GI+ RDLKPEN+LL+ ++++ DFG +
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQI----------------------------TDFGTA 177
Query: 199 KHLGHSG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
K L + F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 178 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 114 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 174 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 45/177 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L+ F+D +Y+YM++E GG++ ++ + A F TA V+ A
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR------------FYTAEVVLA 185
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
L+ +H+ G + RD+KP+N+LLD G++KL DF
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKL----------------------------ADF 217
Query: 196 GFSKHLGHSG-CKTWTFCGTPEYVAPEIIKNRGHD----RAVDYWALGILMHELLTG 247
G + G + T GTP+Y++PE++K++G D R D+W++G+ ++E+L G
Sbjct: 218 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GG++ ++ + A F TA V+ AL+ +H+ G + RD+KP+N+LLD
Sbjct: 151 MVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 209
Query: 61 GYVKLVS 67
G++KL
Sbjct: 210 GHLKLAD 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 49/180 (27%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L+ F+D KY+YM++E GG++ ++ + A F TA V+
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAK------------FYTAEVVL 185
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
AL+ +H+ G++ RD+KP+N+LLD G++KL D
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKL----------------------------AD 217
Query: 195 FGFSKHLGHSG---CKTWTFCGTPEYVAPEIIKNRGHD----RAVDYWALGILMHELLTG 247
FG + +G C T GTP+Y++PE++K++G D R D+W++G+ + E+L G
Sbjct: 218 FGTCMKMDETGMVHCD--TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GG++ ++ + A F TA V+ AL+ +H+ G++ RD+KP+N+LLD
Sbjct: 152 MVMEYMPGGDLVNLMSNYDV-PEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKH 210
Query: 61 GYVKLVS 67
G++KL
Sbjct: 211 GHLKLAD 217
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 35/171 (20%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
L + D K+VY++ E GGE+ + + F + ASF+ + + +
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV----------- 134
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
EYLH++G+V RDLKP N+L + E + I DFG
Sbjct: 135 EYLHSQGVVHRDLKPSNILY-----------------VDESGNPECLRI-------CDFG 170
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
F+K L T C T +VAPE++K +G+D D W+LGIL++ +L G
Sbjct: 171 FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL-LDN 59
++ E GGE+ + + F + ASF+ + + +EYLH++G+V RDLKP N+L +D
Sbjct: 98 LVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDE 157
Query: 60 RG 61
G
Sbjct: 158 SG 159
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 35/171 (20%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
L + D K+VY++ E GGE+ + + F + ASF+ + + +
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV----------- 134
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
EYLH++G+V RDLKP N+L + E + I DFG
Sbjct: 135 EYLHSQGVVHRDLKPSNILY-----------------VDESGNPECLRI-------CDFG 170
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
F+K L T C T +VAPE++K +G+D D W+LGIL++ +L G
Sbjct: 171 FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL-LDN 59
++ E GGE+ + + F + ASF+ + + +EYLH++G+V RDLKP N+L +D
Sbjct: 98 LVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDE 157
Query: 60 RG 61
G
Sbjct: 158 SG 159
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 50/227 (22%)
Query: 31 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQ-------TRLYKTFKD 83
+ V+ A E +R + L+ +++ +N+ V V+R++ +LY F+D
Sbjct: 51 STVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVKLYFCFQD 108
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
+ +Y L GE+ +R+ FD+ F TA ++ AL EYLH +G
Sbjct: 109 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL-----------EYLHGKG 157
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
I+ RDLKPEN+LL+ ++++ DFG +K L
Sbjct: 158 IIHRDLKPENILLNEDMHIQI----------------------------TDFGTAKVLSP 189
Query: 204 SG--CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ F GT +YV+PE++ + ++ D WALG ++++L+ G+
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 236
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
GE+ +R+ FD+ F TA ++ ALEYLH +GI+ RDLKPEN+LL+ ++++
Sbjct: 121 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 180
Query: 68 ------RKKKTRQTRLYKTFKDSKYVYMLL----EACLGGEVWTI 102
+++Q R ++YV L AC ++W +
Sbjct: 181 FGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 225
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 35/171 (20%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
L + D KYVY++ E GGE+ + + F + AS + L IT V
Sbjct: 81 LKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAV-------LFTITKTV---- 129
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
EYLH +G+V RDLKP N+L + E +S I DFG
Sbjct: 130 EYLHAQGVVHRDLKPSNILY-----------------VDESGNPESIRI-------CDFG 165
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
F+K L T C T +VAPE+++ +G+D A D W+LG+L++ LTG
Sbjct: 166 FAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL-LDN 59
++ E GGE+ + + F + AS + + + +EYLH +G+V RDLKP N+L +D
Sbjct: 93 VVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDE 152
Query: 60 RG 61
G
Sbjct: 153 SG 154
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 45/205 (21%)
Query: 43 RGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTI 102
+ FRD EN + ++ + K L ++ + + Y++++ GGE++
Sbjct: 44 KSPAFRDSSLEN-------EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDR 96
Query: 103 LRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYV 162
+ ER + + AS + V+ A+ +YLH GIV RDLKPENLL
Sbjct: 97 ILERGVYTEKDASLVIQQVLSAV-----------KYLHENGIVHRDLKPENLL------- 138
Query: 163 KLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEI 222
Y+ E +S +I+ DFG SK + +G + T CGTP YVAPE+
Sbjct: 139 ---------YLTPEE---NSKIMIT------DFGLSK-MEQNGIMS-TACGTPGYVAPEV 178
Query: 223 IKNRGHDRAVDYWALGILMHELLTG 247
+ + + +AVD W++G++ + LL G
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCG 203
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
++++ GGE++ + ER + + AS + V+ A++YLH GIV RDLKPENLL
Sbjct: 83 LVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLL 138
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 46/177 (25%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
L +++ S +++++ + GE++ L E+ + I ++EA+ F
Sbjct: 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF--------- 215
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
LH IV RDLKPEN+LLD+ ++L DFG
Sbjct: 216 --LHANNIVHRDLKPENILLDDNMQIRLS----------------------------DFG 245
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIK------NRGHDRAVDYWALGILMHELLTG 247
FS HL G K CGTP Y+APEI+K + G+ + VD WA G+++ LL G
Sbjct: 246 FSCHL-EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 9 GEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
GE++ L E+ + I ++EA+ +LH IV RDLKPEN+LLD+ ++L
Sbjct: 185 GELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRL 241
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 37/185 (20%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
+ ++ + K L ++ ++Y++++ GGE++ + E+ + + AS + +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL---IF 123
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD A++YLH GIV RDLKPENLL +Y + E DS
Sbjct: 124 QVLD--------AVKYLHDLGIVHRDLKPENLL---------------YYSLDE----DS 156
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+IS DFG SK + G T CGTP YVAPE++ + + +AVD W++G++ +
Sbjct: 157 KIMIS------DFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 243 ELLTG 247
LL G
Sbjct: 210 ILLCG 214
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
++++ GGE++ + E+ + + AS + V++A++YLH GIV RDLKPENLL
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 37/185 (20%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
+ ++ + K L ++ ++Y++++ GGE++ + E+ + + AS + +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL---IF 123
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD A++YLH GIV RDLKPENLL +Y + E DS
Sbjct: 124 QVLD--------AVKYLHDLGIVHRDLKPENLL---------------YYSLDE----DS 156
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+IS DFG SK + G T CGTP YVAPE++ + + +AVD W++G++ +
Sbjct: 157 KIMIS------DFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 243 ELLTG 247
LL G
Sbjct: 210 ILLCG 214
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
++++ GGE++ + E+ + + AS + V++A++YLH GIV RDLKPENLL
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 37/185 (20%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
+ ++ + K L ++ ++Y++++ GGE++ + E+ + + AS + +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL---IF 123
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD A++YLH GIV RDLKPENLL +Y + E DS
Sbjct: 124 QVLD--------AVKYLHDLGIVHRDLKPENLL---------------YYSLDE----DS 156
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+IS DFG SK + G T CGTP YVAPE++ + + +AVD W++G++ +
Sbjct: 157 KIMIS------DFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 243 ELLTG 247
LL G
Sbjct: 210 ILLCG 214
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
++++ GGE++ + E+ + + AS + V++A++YLH GIV RDLKPENLL
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 37/185 (20%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
+ ++ + K L ++ ++Y++++ GGE++ + E+ + + AS + +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL---IF 123
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD A++YLH GIV RDLKPENLL +Y + E DS
Sbjct: 124 QVLD--------AVKYLHDLGIVHRDLKPENLL---------------YYSLDE----DS 156
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+IS DFG SK + G T CGTP YVAPE++ + + +AVD W++G++ +
Sbjct: 157 KIMIS------DFGLSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 243 ELLTG 247
LL G
Sbjct: 210 ILLCG 214
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
++++ GGE++ + E+ + + AS + V++A++YLH GIV RDLKPENLL
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 35/178 (19%)
Query: 69 KKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFI 128
K R L++ ++++ + ++LE GGE++++ C + A VI + I
Sbjct: 86 KSCPRVINLHEVYENTSEIILILEYAAGGEIFSL-----CLPELAEMVSENDVIRLIKQI 140
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
+E + YLH IV DLKP+N+LL + YP G I
Sbjct: 141 ----LEGVYYLHQNNIVHLDLKPQNILLSS-------IYPLGDIKI-------------- 175
Query: 189 GQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
VDFG S+ +GH C+ GTPEY+APEI+ A D W +GI+ + LLT
Sbjct: 176 ----VDFGMSRKIGH-ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 1 MLLEACLGGEVWTI-LRE-RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
++LE GGE++++ L E +N + ++E + YLH IV DLKP+N+LL
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165
Query: 59 N---RGYVKLV 66
+ G +K+V
Sbjct: 166 SIYPLGDIKIV 176
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 37/171 (21%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
L ++ ++Y++++ GGE++ + E+ + + AS + V++A+
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAV----------- 133
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
YLH GIV RDLKPENLL +Y E +K +IS DFG
Sbjct: 134 YYLHRMGIVHRDLKPENLL---------------YYSQDEESK----IMIS------DFG 168
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
SK G + T CGTP YVAPE++ + + +AVD W++G++ + LL G
Sbjct: 169 LSKMEGKGDVMS-TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
++++ GGE++ + E+ + + AS + V++A+ YLH GIV RDLKPENLL
Sbjct: 97 LVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 152
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 41/172 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RLY F D + +Y++LE GE++ L++ FD+ TA ++E L +A
Sbjct: 87 RLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQR----TATIMEEL-------ADA 135
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
L Y H + ++ RD+KPENLLL +G +K+ DF
Sbjct: 136 LMYCHGKKVIHRDIKPENLLLGLKGELKI----------------------------ADF 167
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G+S H + T CGT +Y+ PE+I+ R H+ VD W +G+L +ELL G
Sbjct: 168 GWSVHA--PSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPEN 54
++LE GE++ L++ FD+ + I + +AL Y H + ++ RD+KPEN
Sbjct: 100 LILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN 153
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 38/174 (21%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L++ F D + ++++E GGE++ ++++ F + AS+I ++ A+
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAV---------- 119
Query: 136 LEYLHTRGIVFRDLKPENLLL-DNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++H G+V RDLKPENLL D ++++ +D
Sbjct: 120 -SHMHDVGVVHRDLKPENLLFTDENDNLEIKI--------------------------ID 152
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
FGF++ T C T Y APE++ G+D + D W+LG++++ +L+G
Sbjct: 153 FGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGE++ ++++ F + AS+I ++ A+ ++H G+V RDLKPENLL +
Sbjct: 83 LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDE 142
Query: 61 G 61
Sbjct: 143 N 143
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 28/121 (23%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F TA ++ LE+LH R I++RDLKPEN+LLD+ G V++
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--------------------- 331
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
D G + L KT + GTP ++APE++ +D +VDY+ALG+ ++E++
Sbjct: 332 -------DLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
Query: 247 G 247
Sbjct: 385 A 385
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 11 VWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++ + + F + A F TA ++ LE+LH R I++RDLKPEN+LLD+ G V++
Sbjct: 276 IYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 28/121 (23%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F TA ++ LE+LH R I++RDLKPEN+LLD+ G V++
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--------------------- 331
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
D G + L KT + GTP ++APE++ +D +VDY+ALG+ ++E++
Sbjct: 332 -------DLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
Query: 247 G 247
Sbjct: 385 A 385
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 11 VWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++ + + F + A F TA ++ LE+LH R I++RDLKPEN+LLD+ G V++
Sbjct: 276 IYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 28/121 (23%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F TA ++ LE+LH R I++RDLKPEN+LLD+ G V++
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--------------------- 331
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
D G + L KT + GTP ++APE++ +D +VDY+ALG+ ++E++
Sbjct: 332 -------DLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
Query: 247 G 247
Sbjct: 385 A 385
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 11 VWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++ + + F + A F TA ++ LE+LH R I++RDLKPEN+LLD+ G V++
Sbjct: 276 IYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 28/121 (23%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F TA ++ LE+LH R I++RDLKPEN+LLD+ G V++
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--------------------- 331
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
D G + L KT + GTP ++APE++ +D +VDY+ALG+ ++E++
Sbjct: 332 -------DLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
Query: 247 G 247
Sbjct: 385 A 385
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 11 VWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++ + + F + A F TA ++ LE+LH R I++RDLKPEN+LLD+ G V++
Sbjct: 276 IYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL+ + ++ + Y++ + GGE++ + R + + AS C+ + ++E+
Sbjct: 92 RLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQ--------ILES 140
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV-D 194
+ Y H+ GIV R+LKPENLLL ++ G VK+ D
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKA--------------------------KGAAVKLAD 174
Query: 195 FGFSKHLGHSGCKTW-TFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + + S + W F GTP Y++PE++K + + VD WA G++++ LL G
Sbjct: 175 FGLAIEVNDS--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ + GGE++ + R + + AS ++E++ Y H+ GIV R+LKPENLLL ++
Sbjct: 105 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK 164
Query: 61 G 61
Sbjct: 165 A 165
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 41/175 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
RL+ + ++ + Y++ + GGE++ + R + + AS C+ + ++E
Sbjct: 67 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQ--------ILE 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV- 193
++ Y H+ GIV R+LKPENLLL ++ G VK+
Sbjct: 116 SIAYCHSNGIVHRNLKPENLLLASKA--------------------------KGAAVKLA 149
Query: 194 DFGFSKHLGHSGCKTWT-FCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
DFG + + S + W F GTP Y++PE++K + + VD WA G++++ LL G
Sbjct: 150 DFGLAIEVNDS--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ + GGE++ + R + + AS ++E++ Y H+ GIV R+LKPENLLL ++
Sbjct: 81 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK 140
Query: 61 G 61
Sbjct: 141 A 141
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 41/175 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
RL+ + ++ + Y++ + GGE++ + R + + AS C+ + ++E
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQ--------ILE 116
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV- 193
++ Y H+ GIV R+LKPENLLL ++ G VK+
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKA--------------------------KGAAVKLA 150
Query: 194 DFGFSKHLGHSGCKTWT-FCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
DFG + + S + W F GTP Y++PE++K + + VD WA G++++ LL G
Sbjct: 151 DFGLAIEVNDS--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ + GGE++ + R + + AS ++E++ Y H+ GIV R+LKPENLLL ++
Sbjct: 82 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK 141
Query: 61 G 61
Sbjct: 142 A 142
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL+ + ++ + Y++ + GGE++ + R + + AS C+ + ++E+
Sbjct: 69 RLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQ--------ILES 117
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV-D 194
+ Y H+ GIV R+LKPENLLL ++ G VK+ D
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKA--------------------------KGAAVKLAD 151
Query: 195 FGFSKHLGHSGCKTWT-FCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + + S + W F GTP Y++PE++K + + VD WA G++++ LL G
Sbjct: 152 FGLAIEVNDS--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ + GGE++ + R + + AS ++E++ Y H+ GIV R+LKPENLLL ++
Sbjct: 82 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK 141
Query: 61 G 61
Sbjct: 142 A 142
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 45/175 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTIL--RERTCFDDNAASFITACVIEALDFITACVI 133
+L++ + K +Y+++E GGEV+ L R + A F ++
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------------RQIV 124
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
A++Y H + IV RDLK ENLLLD +K+
Sbjct: 125 SAVQYCHQKYIVHRDLKAENLLLDGDMNIKI----------------------------A 156
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
DFGFS G K TFCG+P Y APE+ + + +D VD W+LG++++ L++G
Sbjct: 157 DFGFSNEFT-VGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGEV+ L + A ++ A++Y H + IV RDLK ENLLLD
Sbjct: 91 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGD 150
Query: 61 GYVKLVS 67
+K+
Sbjct: 151 MNIKIAD 157
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 52/178 (29%)
Query: 79 KTFKDSKYVYMLLEACLGGEVWTI------LRERTCFDDNAASFITACVIEALDFITACV 132
K F D++ Y++LE GGE++ L+E TC L F +
Sbjct: 81 KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---------------KLYFYQMLL 125
Query: 133 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK 192
A++YLH GI+ RDLKPEN+LL ++ + D I+
Sbjct: 126 --AVQYLHENGIIHRDLKPENVLLSSQ-------------------EEDCLIKIT----- 159
Query: 193 VDFGFSKHLGHSGCKTWTFCGTPEYVAPEI---IKNRGHDRAVDYWALGILMHELLTG 247
DFG SK LG + T CGTP Y+APE+ + G++RAVD W+LG+++ L+G
Sbjct: 160 -DFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ + + ++ A++YLH GI+ RDLKPEN+LL ++
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 45/175 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTIL--RERTCFDDNAASFITACVIEALDFITACVI 133
+L++ + K +Y+++E GGEV+ L R + A F ++
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------------RQIV 123
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
A++Y H + IV RDLK ENLLLD +K+
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKI----------------------------A 155
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
DFGFS G K TFCG+P Y APE+ + + +D VD W+LG++++ L++G
Sbjct: 156 DFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGEV+ L + A ++ A++Y H + IV RDLK ENLLLD
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 61 GYVKL 65
+K+
Sbjct: 150 MNIKI 154
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 52/178 (29%)
Query: 79 KTFKDSKYVYMLLEACLGGEVWTI------LRERTCFDDNAASFITACVIEALDFITACV 132
K F D++ Y++LE GGE++ L+E TC L F +
Sbjct: 81 KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---------------KLYFYQMLL 125
Query: 133 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK 192
A++YLH GI+ RDLKPEN+LL ++ + D I+
Sbjct: 126 --AVQYLHENGIIHRDLKPENVLLSSQ-------------------EEDCLIKIT----- 159
Query: 193 VDFGFSKHLGHSGCKTWTFCGTPEYVAPEI---IKNRGHDRAVDYWALGILMHELLTG 247
DFG SK LG + T CGTP Y+APE+ + G++RAVD W+LG+++ L+G
Sbjct: 160 -DFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ + + ++ A++YLH GI+ RDLKPEN+LL ++
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 45/175 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTIL--RERTCFDDNAASFITACVIEALDFITACVI 133
+L++ + K +Y+++E GGEV+ L R + A F ++
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------------RQIV 123
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
A++Y H + IV RDLK ENLLLD +K+
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKI----------------------------A 155
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
DFGFS G K TFCG+P Y APE+ + + +D VD W+LG++++ L++G
Sbjct: 156 DFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGEV+ L + A ++ A++Y H + IV RDLK ENLLLD
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 61 GYVKL 65
+K+
Sbjct: 150 MNIKI 154
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 41/174 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L++ + K +Y+++E GGEV+ L + A ++ A+
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV--------- 124
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+Y H + IV RDLK ENLLLD +K+ D
Sbjct: 125 --QYCHQKRIVHRDLKAENLLLDADMNIKI----------------------------AD 154
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
FGFS G K TFCG+P Y APE+ + + +D VD W+LG++++ L++G
Sbjct: 155 FGFSNEFT-VGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGEV+ L + A ++ A++Y H + IV RDLK ENLLLD
Sbjct: 88 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDAD 147
Query: 61 GYVKL 65
+K+
Sbjct: 148 MNIKI 152
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 45/175 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTIL--RERTCFDDNAASFITACVIEALDFITACVI 133
+L++ + K +Y+++E GGEV+ L R + A F ++
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------------RQIV 123
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
A++Y H + IV RDLK ENLLLD +K+
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKI----------------------------A 155
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
DFGFS G K TFCG+P Y APE+ + + +D VD W+LG++++ L++G
Sbjct: 156 DFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGEV+ L + A ++ A++Y H + IV RDLK ENLLLD
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 61 GYVKL 65
+K+
Sbjct: 150 MNIKI 154
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 52/178 (29%)
Query: 79 KTFKDSKYVYMLLEACLGGEVWTI------LRERTCFDDNAASFITACVIEALDFITACV 132
K F D++ Y++LE GGE++ L+E TC L F +
Sbjct: 81 KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---------------KLYFYQMLL 125
Query: 133 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK 192
A++YLH GI+ RDLKPEN+LL ++ + D I+
Sbjct: 126 --AVQYLHENGIIHRDLKPENVLLSSQ-------------------EEDCLIKIT----- 159
Query: 193 VDFGFSKHLGHSGCKTWTFCGTPEYVAPEI---IKNRGHDRAVDYWALGILMHELLTG 247
DFG SK LG + T CGTP Y+APE+ + G++RAVD W+LG+++ L+G
Sbjct: 160 -DFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ + + ++ A++YLH GI+ RDLKPEN+LL ++
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 52/178 (29%)
Query: 79 KTFKDSKYVYMLLEACLGGEVWTI------LRERTCFDDNAASFITACVIEALDFITACV 132
K F D++ Y++LE GGE++ L+E TC L F +
Sbjct: 80 KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---------------KLYFYQMLL 124
Query: 133 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK 192
A++YLH GI+ RDLKPEN+LL ++ + D I+
Sbjct: 125 --AVQYLHENGIIHRDLKPENVLLSSQ-------------------EEDCLIKIT----- 158
Query: 193 VDFGFSKHLGHSGCKTWTFCGTPEYVAPEI---IKNRGHDRAVDYWALGILMHELLTG 247
DFG SK LG + T CGTP Y+APE+ + G++RAVD W+LG+++ L+G
Sbjct: 159 -DFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ + + ++ A++YLH GI+ RDLKPEN+LL ++
Sbjct: 90 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 149
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 46/178 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L T++ + + +++ + GE++ L E+ + I ++E + C
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI-----CA--- 139
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
LH IV RDLKPEN+LLD+ +KL DF
Sbjct: 140 ---LHKLNIVHRDLKPENILLDDDMNIKL----------------------------TDF 168
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIK------NRGHDRAVDYWALGILMHELLTG 247
GFS L G K + CGTP Y+APEII+ + G+ + VD W+ G++M+ LL G
Sbjct: 169 GFSCQLD-PGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 9 GEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
GE++ L E+ + I ++E + LH IV RDLKPEN+LLD+ +KL
Sbjct: 109 GELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLT 166
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 52/178 (29%)
Query: 79 KTFKDSKYVYMLLEACLGGEVWTI------LRERTCFDDNAASFITACVIEALDFITACV 132
K F D++ Y++LE GGE++ L+E TC L F +
Sbjct: 87 KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---------------KLYFYQ--M 129
Query: 133 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK 192
+ A++YLH GI+ RDLKPEN+LL ++ + D I+
Sbjct: 130 LLAVQYLHENGIIHRDLKPENVLLSSQ-------------------EEDCLIKIT----- 165
Query: 193 VDFGFSKHLGHSGCKTWTFCGTPEYVAPEI---IKNRGHDRAVDYWALGILMHELLTG 247
DFG SK LG + T CGTP Y+APE+ + G++RAVD W+LG+++ L+G
Sbjct: 166 -DFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ + + ++ A++YLH GI+ RDLKPEN+LL ++
Sbjct: 97 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 156
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 39/167 (23%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
F+D +VY++LE C + + + R + A + I+ + +YLH
Sbjct: 111 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV-----------QYLH 159
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ RDLK NL L++ VK+ DFG +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIG----------------------------DFGLATK 191
Query: 201 LGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ G + T CGTP Y+APE++ +GH VD W+LG +++ LL G
Sbjct: 192 IEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE C + + + R + A + I+ ++YLH ++ RDLK NL L++
Sbjct: 119 VVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 178
Query: 61 GYVKL 65
VK+
Sbjct: 179 MDVKI 183
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 41/174 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L++ + K +Y+++E GGEV+ L + A ++ A+
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAV--------- 119
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+Y H + IV RDLK ENLLLD +K+ D
Sbjct: 120 --QYCHQKFIVHRDLKAENLLLDADMNIKI----------------------------AD 149
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
FGFS G K TFCG+P Y APE+ + + +D VD W+LG++++ L++G
Sbjct: 150 FGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGEV+ L + A ++ A++Y H + IV RDLK ENLLLD
Sbjct: 83 LVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 142
Query: 61 GYVKL 65
+K+
Sbjct: 143 MNIKI 147
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 52/178 (29%)
Query: 79 KTFKDSKYVYMLLEACLGGEVWTI------LRERTCFDDNAASFITACVIEALDFITACV 132
K F D++ Y++LE GGE++ L+E TC L F +
Sbjct: 220 KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---------------KLYFYQ--M 262
Query: 133 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK 192
+ A++YLH GI+ RDLKPEN+LL ++ + D I+
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQ-------------------EEDCLIKIT----- 298
Query: 193 VDFGFSKHLGHSGCKTWTFCGTPEYVAPEI---IKNRGHDRAVDYWALGILMHELLTG 247
DFG SK LG + T CGTP Y+APE+ + G++RAVD W+LG+++ L+G
Sbjct: 299 -DFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ + + ++ A++YLH GI+ RDLKPEN+LL ++
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 46/178 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L T++ + + +++ + GE++ L E+ + I ++E + C
Sbjct: 75 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI-----CA--- 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
LH IV RDLKPEN+LLD+ +KL DF
Sbjct: 127 ---LHKLNIVHRDLKPENILLDDDMNIKL----------------------------TDF 155
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIK------NRGHDRAVDYWALGILMHELLTG 247
GFS L G K CGTP Y+APEII+ + G+ + VD W+ G++M+ LL G
Sbjct: 156 GFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 9 GEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
GE++ L E+ + I ++E + LH IV RDLKPEN+LLD+ +KL
Sbjct: 96 GELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLT 153
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 52/178 (29%)
Query: 79 KTFKDSKYVYMLLEACLGGEVWTI------LRERTCFDDNAASFITACVIEALDFITACV 132
K F D++ Y++LE GGE++ L+E TC L F +
Sbjct: 206 KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC---------------KLYFYQ--M 248
Query: 133 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK 192
+ A++YLH GI+ RDLKPEN+LL ++ + D I+
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQ-------------------EEDCLIKIT----- 284
Query: 193 VDFGFSKHLGHSGCKTWTFCGTPEYVAPEI---IKNRGHDRAVDYWALGILMHELLTG 247
DFG SK LG + T CGTP Y+APE+ + G++RAVD W+LG+++ L+G
Sbjct: 285 -DFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ + + ++ A++YLH GI+ RDLKPEN+LL ++
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 275
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 37/174 (21%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L + F+ + ++LE GGE++ + E+ + + +A D + ++EA
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSER----------DAADAVKQ-ILEA 160
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ YLH GIV RDLKPENLL PA D+ I+ DF
Sbjct: 161 VAYLHENGIVHRDLKPENLLYAT---------PAP----------DAPLKIA------DF 195
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMK 249
G SK + H T CGTP Y APEI++ + VD W++GI+ + LL G +
Sbjct: 196 GLSKIVEHQVLMK-TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE 248
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
++LE GGE++ + E+ + + A+ ++EA+ YLH GIV RDLKPENLL
Sbjct: 125 LVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLL 180
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 46/178 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L T++ + + +++ + GE++ L E+ + I ++E + C
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI-----CA--- 139
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
LH IV RDLKPEN+LLD+ +KL DF
Sbjct: 140 ---LHKLNIVHRDLKPENILLDDDMNIKL----------------------------TDF 168
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIK------NRGHDRAVDYWALGILMHELLTG 247
GFS L G K CGTP Y+APEII+ + G+ + VD W+ G++M+ LL G
Sbjct: 169 GFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 9 GEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
GE++ L E+ + I ++E + LH IV RDLKPEN+LLD+ +KL
Sbjct: 109 GELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLT 166
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 38/172 (22%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+LY+ F+D + Y+++E GGE++ + R F S + A VI V+
Sbjct: 68 KLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKF-----SEVDAAVI------MKQVLSG 116
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
YLH IV RDLKPENLLL+++ D+ I VDF
Sbjct: 117 TTYLHKHNIVHRDLKPENLLLESKSR-------------------DALIKI------VDF 151
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G S H G K GT Y+APE+++ + +D D W+ G++++ LL G
Sbjct: 152 GLSAHF-EVGGKMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCG 201
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGE++ + R F + A+ I V+ YLH IV RDLKPENLLL+++
Sbjct: 81 LVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESK 140
Query: 61 GYVKLV 66
L+
Sbjct: 141 SRDALI 146
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 42/174 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVW--TILRERTCFDDNAASFITACVIEALDFITACVI 133
+LY+ F+D + Y+++E GGE++ ILR++ D A I V+
Sbjct: 85 KLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------------IMKQVL 131
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
YLH IV RDLKPENLLL+++ D+ I V
Sbjct: 132 SGTTYLHKHNIVHRDLKPENLLLESKSR-------------------DALIKI------V 166
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
DFG S H G K GT Y+APE+++ + +D D W+ G++++ LL G
Sbjct: 167 DFGLSAHF-EVGGKMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCG 218
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGE++ + R F + A+ I V+ YLH IV RDLKPENLLL+++
Sbjct: 98 LVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESK 157
Query: 61 GYVKLV 66
L+
Sbjct: 158 SRDALI 163
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 43/180 (23%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
L+ +F+D + ++M+++ LGG++ L++ F + FI V+ AL
Sbjct: 80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL----------FICELVM-AL 128
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
+YL + I+ RD+KP+N+LLD G+V + DF
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHI----------------------------TDFN 160
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIKNR---GHDRAVDYWALGILMHELLTGMKESNV 253
+ L T T GT Y+APE+ +R G+ AVD+W+LG+ +ELL G + ++
Sbjct: 161 IAAMLPRETQIT-TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M+++ LGG++ L++ F + ++ AL+YL + I+ RD+KP+N+LLD
Sbjct: 92 MVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEH 151
Query: 61 GYVKLV 66
G+V +
Sbjct: 152 GHVHIT 157
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 38/173 (21%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL+ + + + Y++ + GGE++ + R + + AS C+ + L+ + C
Sbjct: 67 RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQILESVNHC---- 119
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV-D 194
H GIV RDLKPENLLL ++ G VK+ D
Sbjct: 120 ----HLNGIVHRDLKPENLLLASKS--------------------------KGAAVKLAD 149
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + + + F GTP Y++PE+++ + + VD WA G++++ LL G
Sbjct: 150 FGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ + GGE++ + R + + AS ++E++ + H GIV RDLKPENLLL ++
Sbjct: 80 LVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASK 139
Query: 61 G 61
Sbjct: 140 S 140
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 38/173 (21%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL+ + + + Y++ + GGE++ + R + + AS C+ + L+ + C
Sbjct: 67 RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQILESVNHC---- 119
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV-D 194
H GIV RDLKPENLLL ++ G VK+ D
Sbjct: 120 ----HLNGIVHRDLKPENLLLASKS--------------------------KGAAVKLAD 149
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + + + F GTP Y++PE+++ + + VD WA G++++ LL G
Sbjct: 150 FGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ + GGE++ + R + + AS ++E++ + H GIV RDLKPENLLL ++
Sbjct: 80 LVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASK 139
Query: 61 G 61
Sbjct: 140 S 140
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 39/167 (23%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
F+D+ +V+++LE C + + + R + A + ++ C +YLH
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIV------LGC-----QYLH 134
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ RDLK NL L+ VK+ DFG +
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIG----------------------------DFGLATK 166
Query: 201 LGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ + G + T CGTP Y+APE++ +GH VD W++G +M+ LL G
Sbjct: 167 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE C + + + R + A + ++ +YLH ++ RDLK NL L+
Sbjct: 94 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 153
Query: 61 GYVKL 65
VK+
Sbjct: 154 LEVKI 158
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 38/179 (21%)
Query: 70 KKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFIT 129
K + RL+ + + + Y++ + GGE++ + R + + AS C+ +
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQ------ 111
Query: 130 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGG 189
++EA+ + H G+V RDLKPENLLL ++ G
Sbjct: 112 --ILEAVLHCHQMGVVHRDLKPENLLLASK--------------------------CKGA 143
Query: 190 QVKV-DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
VK+ DFG + + + F GTP Y++PE+++ + + VD WA G++++ LL G
Sbjct: 144 AVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ + GGE++ + R + + AS ++EA+ + H G+V RDLKPENLLL ++
Sbjct: 80 LVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASK 139
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 39/167 (23%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
F+D+ +V+++LE C + + + R + A + ++ C +YLH
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIV------LGC-----QYLH 134
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ RDLK NL L+ VK+ DFG +
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIG----------------------------DFGLATK 166
Query: 201 LGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ + G + T CGTP Y+APE++ +GH VD W++G +M+ LL G
Sbjct: 167 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE C + + + R + A + ++ +YLH ++ RDLK NL L+
Sbjct: 94 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 153
Query: 61 GYVKL 65
VK+
Sbjct: 154 LEVKI 158
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 45/176 (25%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTIL--RERTCFDDNAASFITACVIEALDFITACV 132
+L++ + K +Y+++E GGEV+ L R + A F +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------------RQI 122
Query: 133 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK 192
+ A++Y H + IV RDLK ENLLLD +K+
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKI---------------------------- 154
Query: 193 VDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
DFGFS G K FCG+P Y APE+ + + +D VD W+LG++++ L++G
Sbjct: 155 ADFGFSNEFTF-GNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGEV+ L + A ++ A++Y H + IV RDLK ENLLLD
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 61 GYVKL 65
+K+
Sbjct: 150 MNIKI 154
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 39/167 (23%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
F+D+ +V+++LE C + + + R + A + ++ C +YLH
Sbjct: 90 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIV------LGC-----QYLH 138
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ RDLK NL L+ VK+ DFG +
Sbjct: 139 RNRVIHRDLKLGNLFLNEDLEVKIG----------------------------DFGLATK 170
Query: 201 LGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ + G + T CGTP Y+APE++ +GH VD W++G +M+ LL G
Sbjct: 171 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 217
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE C + + + R + A + ++ +YLH ++ RDLK NL L+
Sbjct: 98 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 157
Query: 61 GYVKL 65
VK+
Sbjct: 158 LEVKI 162
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 45/176 (25%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTIL--RERTCFDDNAASFITACVIEALDFITACV 132
+L++ + K +Y+++E GGEV+ L R + A F +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------------RQI 122
Query: 133 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK 192
+ A++Y H + IV RDLK ENLLLD +K+
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKI---------------------------- 154
Query: 193 VDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
DFGFS G K FCG P Y APE+ + + +D VD W+LG++++ L++G
Sbjct: 155 ADFGFSNEFTF-GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGEV+ L + A ++ A++Y H + IV RDLK ENLLLD
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 61 GYVKL 65
+K+
Sbjct: 150 MNIKI 154
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 41/174 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+L++ + K +Y+++E GGEV+ L + A ++ A+
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV--------- 127
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+Y H + IV RDLK ENLLLD +K+ D
Sbjct: 128 --QYCHQKRIVHRDLKAENLLLDADMNIKI----------------------------AD 157
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
FGFS G K FCG P Y APE+ + + +D VD W+LG++++ L++G
Sbjct: 158 FGFSNEFT-VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGEV+ L + A ++ A++Y H + IV RDLK ENLLLD
Sbjct: 91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDAD 150
Query: 61 GYVKL 65
+K+
Sbjct: 151 MNIKI 155
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 41/172 (23%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRER-TCFDDNAASFITACVIEALDFITACVIEALEY 138
+F ++ ++ + +E GG + +LR + DN + + F T ++E L+Y
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE---------QTIGFYTKQILEGLKY 137
Query: 139 LHTRGIVFRDLKPENLLLDN-RGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGF 197
LH IV RD+K +N+L++ G +K+ DFG
Sbjct: 138 LHDNQIVHRDIKGDNVLINTYSGVLKIS----------------------------DFGT 169
Query: 198 SKHLGHSGCKTWTFCGTPEYVAPEIIKN--RGHDRAVDYWALGILMHELLTG 247
SK L T TF GT +Y+APEII RG+ +A D W+LG + E+ TG
Sbjct: 170 SKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 1 MLLEACLGGEVWTILRER-TCFDDNAAS--FITACVIEALEYLHTRGIVFRDLKPENLLL 57
+ +E GG + +LR + DN + F T ++E L+YLH IV RD+K +N+L+
Sbjct: 96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI 155
Query: 58 DNRGYVKLVS 67
+ V +S
Sbjct: 156 NTYSGVLKIS 165
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 70 KKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFIT 129
K RL+ + + + Y++ + GGE++ + R + + AS C+ + L+ +
Sbjct: 79 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAVL 135
Query: 130 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGG 189
C H G+V RDLKPENLLL ++ + G
Sbjct: 136 HC--------HQMGVVHRDLKPENLLLASK--------------------------LKGA 161
Query: 190 QVKV-DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
VK+ DFG + + + F GTP Y++PE+++ + + VD WA G++++ LL G
Sbjct: 162 AVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ + GGE++ + R + + AS ++EA+ + H G+V RDLKPENLLL ++
Sbjct: 98 LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASK 157
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 41/172 (23%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRER-TCFDDNAASFITACVIEALDFITACVIEALEY 138
+F ++ ++ + +E GG + +LR + DN + + F T ++E L+Y
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE---------QTIGFYTKQILEGLKY 123
Query: 139 LHTRGIVFRDLKPENLLLDN-RGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGF 197
LH IV RD+K +N+L++ G +K+ DFG
Sbjct: 124 LHDNQIVHRDIKGDNVLINTYSGVLKIS----------------------------DFGT 155
Query: 198 SKHLGHSGCKTWTFCGTPEYVAPEIIKN--RGHDRAVDYWALGILMHELLTG 247
SK L T TF GT +Y+APEII RG+ +A D W+LG + E+ TG
Sbjct: 156 SKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 207
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 1 MLLEACLGGEVWTILRER-TCFDDNAAS--FITACVIEALEYLHTRGIVFRDLKPENLLL 57
+ +E GG + +LR + DN + F T ++E L+YLH IV RD+K +N+L+
Sbjct: 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI 141
Query: 58 DNRGYVKLVS 67
+ V +S
Sbjct: 142 NTYSGVLKIS 151
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
F+D +VY++LE C + + + R + A + I+ + +YLH
Sbjct: 111 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV-----------QYLH 159
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ RDLK NL L++ VK+ DFG +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIG----------------------------DFGLATK 191
Query: 201 LGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ G + CGTP Y+APE++ +GH VD W+LG +++ LL G
Sbjct: 192 IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE C + + + R + A + I+ ++YLH ++ RDLK NL L++
Sbjct: 119 VVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 178
Query: 61 GYVKL 65
VK+
Sbjct: 179 MDVKI 183
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
F+D +VY++LE C + + + R + A + I+ + +YLH
Sbjct: 95 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV-----------QYLH 143
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ RDLK NL L++ VK+ DFG +
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIG----------------------------DFGLATK 175
Query: 201 LGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ G + CGTP Y+APE++ +GH VD W+LG +++ LL G
Sbjct: 176 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 222
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE C + + + R + A + I+ ++YLH ++ RDLK NL L++
Sbjct: 103 VVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 162
Query: 61 GYVKL 65
VK+
Sbjct: 163 MDVKI 167
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 94/233 (40%), Gaps = 47/233 (20%)
Query: 18 RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRL 77
R C + +++ ++ + G+ DLK E + K L
Sbjct: 41 RRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKRE---------ASICHMLKHPHIVEL 91
Query: 78 YKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALE 137
+T+ +YM+ E G ++ + +R A F+ + + + ++EAL
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRA-----DAGFVYSEAVAS--HYMRQILEALR 144
Query: 138 YLHTRGIVFRDLKPENLLL---DNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
Y H I+ RD+KPEN+LL +N VKL D
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAPVKLG----------------------------D 176
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + LG SG GTP ++APE++K + + VD W G+++ LL+G
Sbjct: 177 FGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
F+D +VY++LE C + + + R + A + I+ + +YLH
Sbjct: 111 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV-----------QYLH 159
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ RDLK NL L++ VK+ DFG +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIG----------------------------DFGLATK 191
Query: 201 LGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ G + CGTP Y+APE++ +GH VD W+LG +++ LL G
Sbjct: 192 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE C + + + R + A + I+ ++YLH ++ RDLK NL L++
Sbjct: 119 VVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 178
Query: 61 GYVKL 65
VK+
Sbjct: 179 MDVKI 183
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 45/175 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTIL--RERTCFDDNAASFITACVIEALDFITACVI 133
+L++ + K +Y++ E GGEV+ L R + A F ++
Sbjct: 77 KLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF-------------RQIV 123
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
A++Y H + IV RDLK ENLLLD +K+
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADXNIKI----------------------------A 155
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
DFGFS G K FCG P Y APE+ + + +D VD W+LG++++ L++G
Sbjct: 156 DFGFSNEFTF-GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ E GGEV+ L + A ++ A++Y H + IV RDLK ENLLLD
Sbjct: 90 LVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 61 GYVKLV 66
+K+
Sbjct: 150 XNIKIA 155
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 40/161 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
+++++E GG + ++ E TC D+ I A E L +ALE+LH+ ++
Sbjct: 92 LWVVMEYLAGGSLTDVVTE-TCMDEGQ---IAAVCRECL--------QALEFLHSNQVIH 139
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+K +N+LL G VKL DFGF +
Sbjct: 140 RDIKSDNILLGMDGSVKL----------------------------TDFGFCAQITPEQS 171
Query: 207 KTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
K T GTP ++APE++ + + VD W+LGI+ E++ G
Sbjct: 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GG + ++ E TC D+ + + ++ALE+LH+ ++ RD+K +N+LL
Sbjct: 94 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD 152
Query: 61 GYVKL 65
G VKL
Sbjct: 153 GSVKL 157
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 86/220 (39%), Gaps = 61/220 (27%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILR------ERTCFDDNAASF 116
V+L+ + RLY+ ++D +Y+ +++E C GG + L C D +
Sbjct: 79 VRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQ 138
Query: 117 ITAC--------------VIEALDF---------ITACVIEALEYLHTRGIVFRDLKPEN 153
I C E+LDF I + AL YLH +GI RD+KPEN
Sbjct: 139 ICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPEN 198
Query: 154 LLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTW---- 209
L +++ VDFG SK +
Sbjct: 199 FLFSTNKSFEIKL--------------------------VDFGLSKEFYKLNNGEYYGMT 232
Query: 210 TFCGTPEYVAPEIIK--NRGHDRAVDYWALGILMHELLTG 247
T GTP +VAPE++ N + D W+ G+L+H LL G
Sbjct: 233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 27 SFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGY-VKLV 66
S I + AL YLH +GI RD+KPEN L N+ + +KLV
Sbjct: 171 SNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLV 212
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 38/172 (22%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+L+ F+D KY Y++ E GGE++ + R FD+ A+ I ++ + C
Sbjct: 110 KLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGI-----C---- 160
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
YLH IV RD+KPEN+LL+N+ +S I VDF
Sbjct: 161 --YLHKHNIVHRDIKPENILLENK---------------------NSLLNIK----IVDF 193
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G S K GT Y+APE++K + ++ D W+ G++M+ LL G
Sbjct: 194 GLSSFFSKD-YKLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCG 243
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
GGE++ + R FD+ A+ I ++ + YLH IV RD+KPEN+LL+N+
Sbjct: 130 GGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN 183
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 39/167 (23%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
F+D+ +V+++LE C + + + R + A + ++ C +YLH
Sbjct: 84 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIV------LGC-----QYLH 132
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ RDLK NL L+ VK+ DFG +
Sbjct: 133 RNRVIHRDLKLGNLFLNEDLEVKIG----------------------------DFGLATK 164
Query: 201 LGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ + G + CGTP Y+APE++ +GH VD W++G +M+ LL G
Sbjct: 165 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE C + + + R + A + ++ +YLH ++ RDLK NL L+
Sbjct: 92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 151
Query: 61 GYVKL 65
VK+
Sbjct: 152 LEVKI 156
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 39/167 (23%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
F+D+ +V+++LE C + + + R + A + ++ C +YLH
Sbjct: 108 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIV------LGC-----QYLH 156
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ RDLK NL L+ VK+ DFG +
Sbjct: 157 RNRVIHRDLKLGNLFLNEDLEVKIG----------------------------DFGLATK 188
Query: 201 LGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ + G + CGTP Y+APE++ +GH VD W++G +M+ LL G
Sbjct: 189 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 235
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE C + + + R + A + ++ +YLH ++ RDLK NL L+
Sbjct: 116 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 175
Query: 61 GYVKL 65
VK+
Sbjct: 176 LEVKI 180
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 38/172 (22%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+LY F+D + Y+++E GGE++ + R F++ + A VI V+
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNE-----VDAAVI------IKQVLSG 148
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ YLH IV RDLKPENLLL E + D+ I VDF
Sbjct: 149 VTYLHKHNIVHRDLKPENLLL-------------------ESKEKDALIKI------VDF 183
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G S + + K GT Y+APE+++ + +D D W++G+++ LL G
Sbjct: 184 GLSA-VFENQKKMKERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAG 233
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GGE++ + R F++ A+ I V+ + YLH IV RDLKPENLLL+++
Sbjct: 113 LVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK 172
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 39/167 (23%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
F+D+ +V+++LE C + + + R + A + ++ C +YLH
Sbjct: 110 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIV------LGC-----QYLH 158
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ RDLK NL L+ VK+ DFG +
Sbjct: 159 RNRVIHRDLKLGNLFLNEDLEVKIG----------------------------DFGLATK 190
Query: 201 LGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ + G + CGTP Y+APE++ +GH VD W++G +M+ LL G
Sbjct: 191 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 237
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE C + + + R + A + ++ +YLH ++ RDLK NL L+
Sbjct: 118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 177
Query: 61 GYVKL 65
VK+
Sbjct: 178 LEVKI 182
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 40/173 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+ Y ++ +++++E GG +LR FD+ F A +++ +++
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-GPFDE----FQIATMLKE-------ILK 131
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
L+YLH+ + RD+K N+LL +G VKL D
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLSEQGDVKL----------------------------AD 163
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + L + K TF GTP ++APE+I+ +D D W+LGI EL G
Sbjct: 164 FGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG 216
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GG +LR FD+ + + +++ L+YLH+ + RD+K N+LL +
Sbjct: 98 IIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ 156
Query: 61 GYVKLV 66
G VKL
Sbjct: 157 GDVKLA 162
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 38/173 (21%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL+ + + + Y++ + GGE++ + R + + AS C+ + ++E+
Sbjct: 94 RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIHQ--------ILES 142
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV-D 194
+ ++H IV RDLKPENLLL ++ G VK+ D
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASK--------------------------CKGAAVKLAD 176
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + + + F GTP Y++PE+++ + + VD WA G++++ LL G
Sbjct: 177 FGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ + GGE++ + R + + AS ++E++ ++H IV RDLKPENLLL ++
Sbjct: 107 LVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASK 166
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 40/186 (21%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACV 121
V+L+ + +LY+ F+D Y Y++ E GGE++ + R F + +AA I
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ-- 134
Query: 122 IEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
V+ + Y+H IV RDLKPENLLL+++ +K
Sbjct: 135 ----------VLSGITYMHKNKIVHRDLKPENLLLESK------------------SKDA 166
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
+ II DFG S H + K GT Y+APE++ +D D W+ G+++
Sbjct: 167 NIRII-------DFGLSTHF-EASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
Query: 242 HELLTG 247
+ LL+G
Sbjct: 218 YILLSG 223
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 4 EACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
E GGE++ + R F + A+ I V+ + Y+H IV RDLKPENLLL+++
Sbjct: 106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS 163
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 40/186 (21%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACV 121
V+L+ + +LY+ F+D Y Y++ E GGE++ + R F + +AA I
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ-- 157
Query: 122 IEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
V+ + Y+H IV RDLKPENLLL+++ +K
Sbjct: 158 ----------VLSGITYMHKNKIVHRDLKPENLLLESK------------------SKDA 189
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
+ II DFG S H + K GT Y+APE++ +D D W+ G+++
Sbjct: 190 NIRII-------DFGLSTHF-EASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 240
Query: 242 HELLTG 247
+ LL+G
Sbjct: 241 YILLSG 246
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 4 EACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
E GGE++ + R F + A+ I V+ + Y+H IV RDLKPENLLL+++
Sbjct: 129 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK 185
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 40/186 (21%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACV 121
V+L+ + +LY+ F+D Y Y++ E GGE++ + R F + +AA I
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ-- 158
Query: 122 IEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
V+ + Y+H IV RDLKPENLLL+++ +K
Sbjct: 159 ----------VLSGITYMHKNKIVHRDLKPENLLLESK------------------SKDA 190
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
+ II DFG S H + K GT Y+APE++ +D D W+ G+++
Sbjct: 191 NIRII-------DFGLSTHF-EASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 241
Query: 242 HELLTG 247
+ LL+G
Sbjct: 242 YILLSG 247
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 4 EACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
E GGE++ + R F + A+ I V+ + Y+H IV RDLKPENLLL+++
Sbjct: 130 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK 186
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 39/165 (23%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 180
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 181 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKETT 215
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
T T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 216 SHNSLT-TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 59 NR 60
++
Sbjct: 196 SK 197
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 40/186 (21%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACV 121
V+L+ + +LY+ F+D Y Y++ E GGE++ + R F + +AA I
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ-- 140
Query: 122 IEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
V+ + Y+H IV RDLKPENLLL+++ +K
Sbjct: 141 ----------VLSGITYMHKNKIVHRDLKPENLLLESK------------------SKDA 172
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
+ II DFG S H S K GT Y+APE++ +D D W+ G+++
Sbjct: 173 NIRII-------DFGLSTHFEASK-KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 223
Query: 242 HELLTG 247
+ LL+G
Sbjct: 224 YILLSG 229
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 4 EACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
E GGE++ + R F + A+ I V+ + Y+H IV RDLKPENLLL+++
Sbjct: 112 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS 169
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 38/179 (21%)
Query: 70 KKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFIT 129
K RL+ + + + Y++ + GGE++ + R + + AS C+ + L+ +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAVL 124
Query: 130 ACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGG 189
C H G+V R+LKPENLLL ++ + G
Sbjct: 125 HC--------HQMGVVHRNLKPENLLLASK--------------------------LKGA 150
Query: 190 QVKV-DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
VK+ DFG + + + F GTP Y++PE+++ + + VD WA G++++ LL G
Sbjct: 151 AVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ + GGE++ + R + + AS ++EA+ + H G+V R+LKPENLLL ++
Sbjct: 87 LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASK 146
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 39/165 (23%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 136
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 137 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKETT 171
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
T T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 172 SHNSLT-TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 59 NR 60
++
Sbjct: 152 SK 153
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 39/165 (23%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 136
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 137 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKETT 171
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
T T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 172 SHNSLT-TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 59 NR 60
++
Sbjct: 152 SK 153
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 39/165 (23%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 93 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 141
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 142 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKETT 176
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
T T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 177 SHNSLT-TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 97 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 156
Query: 59 NR 60
++
Sbjct: 157 SK 158
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 39/165 (23%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 138 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 186
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 187 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKETT 221
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
T T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 222 SHNSLT-TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 142 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 201
Query: 59 NR 60
++
Sbjct: 202 SK 203
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 39/165 (23%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 92 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 140
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 141 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKETT 175
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
T T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 176 SHNSLT-TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 96 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 155
Query: 59 NR 60
++
Sbjct: 156 SK 157
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 39/165 (23%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 94 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 142
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 143 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKETT 177
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
T T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 178 SHNSLT-TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 98 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 157
Query: 59 NR 60
++
Sbjct: 158 SK 159
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 39/165 (23%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 134
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 135 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKETT 169
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
T T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 170 SHNSLT-TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 149
Query: 59 NR 60
++
Sbjct: 150 SK 151
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 39/165 (23%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 87 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 135
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 136 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKETT 170
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
T T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 171 SHNSLT-TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 91 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 150
Query: 59 NR 60
++
Sbjct: 151 SK 152
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 39/165 (23%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 102 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 150
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 151 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKETT 185
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
T T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 186 SHNSLT-TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 165
Query: 59 NR 60
++
Sbjct: 166 SK 167
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 40/171 (23%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
+YK++ + +++L+E GG + I+ + ++ A T C V++AL
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA---TVC---------EAVLQAL 154
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
YLH +G++ RD+K +++LL G VKL DFG
Sbjct: 155 AYLHAQGVIHRDIKSDSILLTLDGRVKLS----------------------------DFG 186
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
F + K GTP ++APE+I + VD W+LGI++ E++ G
Sbjct: 187 FCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+L+E GG + I+ + ++ A+ A V++AL YLH +G++ RD+K +++LL
Sbjct: 119 VLMEFLQGGALTDIVSQVRLNEEQIATVCEA-VLQALAYLHAQGVIHRDIKSDSILLTLD 177
Query: 61 GYVKL 65
G VKL
Sbjct: 178 GRVKL 182
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 38/172 (22%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCF-DDNAASFITACVIEALDFITACVIEA 135
L+ +++ V ++LE GGE++ L ++ ++ A SFI +++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------------ILDG 127
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ YLHT+ I DLKPEN++L ++ P H + +DF
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNI------PIPHIKL------------------IDF 163
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 164 GLA-HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L ++ + A+ +++ + YLHT+ I DLKPEN++L ++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 61 G----YVKLV 66
++KL+
Sbjct: 152 NIPIPHIKLI 161
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 40/161 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
+++++E GG + ++ E TC D+ I A E L +ALE+LH+ ++
Sbjct: 93 LWVVMEYLAGGSLTDVVTE-TCMDEGQ---IAAVCRECL--------QALEFLHSNQVIH 140
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
R++K +N+LL G VKL DFGF +
Sbjct: 141 RNIKSDNILLGMDGSVKL----------------------------TDFGFCAQITPEQS 172
Query: 207 KTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
K T GTP ++APE++ + + VD W+LGI+ E++ G
Sbjct: 173 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GG + ++ E TC D+ + + ++ALE+LH+ ++ R++K +N+LL
Sbjct: 95 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMD 153
Query: 61 GYVKL 65
G VKL
Sbjct: 154 GSVKL 158
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 46/181 (25%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+L+ F+D Y+Y+++E +GG++ T+L + F E F A ++
Sbjct: 124 TQLHFAFQDENYLYLVMEYYVGGDLLTLL----------SKFGERIPAEMARFYLAEIVM 173
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
A++ +H G V RD+KP+N+LLD G+++L D
Sbjct: 174 AIDSVHRLGYVHRDIKPDNILLDRCGHIRL----------------------------AD 205
Query: 195 FGFSKHLGHSG-CKTWTFCGTPEYVAPEIIK-------NRGHDRAVDYWALGILMHELLT 246
FG L G ++ GTP+Y++PEI++ + D+WALG+ +E+
Sbjct: 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY 265
Query: 247 G 247
G
Sbjct: 266 G 266
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 1 MLLEACLGGEVWTILR---ERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
+++E +GG++ T+L ER + A F A ++ A++ +H G V RD+KP+N+LL
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAE--MARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195
Query: 58 DNRGYVKLVS 67
D G+++L
Sbjct: 196 DRCGHIRLAD 205
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 38/172 (22%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCF-DDNAASFITACVIEALDFITACVIEA 135
L+ +++ V ++LE GGE++ L ++ ++ A SFI +++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------------ILDG 127
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ YLHT+ I DLKPEN++L ++ P H + +DF
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNI------PIPHIKL------------------IDF 163
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 164 GLA-HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L ++ + A+ +++ + YLHT+ I DLKPEN++L ++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 61 G----YVKLV 66
++KL+
Sbjct: 152 NIPIPHIKLI 161
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 38/172 (22%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCF-DDNAASFITACVIEALDFITACVIEA 135
L+ +++ V ++LE GGE++ L ++ ++ A SFI +++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------------ILDG 127
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ YLHT+ I DLKPEN++L ++ P H + +DF
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNI------PIPHIKL------------------IDF 163
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 164 GLA-HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L ++ + A+ +++ + YLHT+ I DLKPEN++L ++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 61 G----YVKLV 66
++KL+
Sbjct: 152 NIPIPHIKLI 161
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 38/172 (22%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCF-DDNAASFITACVIEALDFITACVIEA 135
L+ +++ V ++LE GGE++ L ++ ++ A SFI +++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------------ILDG 127
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ YLHT+ I DLKPEN++L ++ P H + +DF
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNI------PIPHIKL------------------IDF 163
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 164 GLA-HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L ++ + A+ +++ + YLHT+ I DLKPEN++L ++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 61 G----YVKLV 66
++KL+
Sbjct: 152 NIPIPHIKLI 161
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 40/186 (21%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACV 121
V+L+ + +LY+ F+D Y Y++ E GGE++ + R F + +AA I
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ-- 134
Query: 122 IEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
V+ + Y H IV RDLKPENLLL+++ +K
Sbjct: 135 ----------VLSGITYXHKNKIVHRDLKPENLLLESK------------------SKDA 166
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
+ II DFG S H + K GT Y+APE++ +D D W+ G+++
Sbjct: 167 NIRII-------DFGLSTHF-EASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
Query: 242 HELLTG 247
+ LL+G
Sbjct: 218 YILLSG 223
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 4 EACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
E GGE++ + R F + A+ I V+ + Y H IV RDLKPENLLL+++
Sbjct: 106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKS 163
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 40/161 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
+++++E GG + ++ E TC D+ I A E L +ALE+LH+ ++
Sbjct: 92 LWVVMEYLAGGSLTDVVTE-TCMDEGQ---IAAVCRECL--------QALEFLHSNQVIH 139
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+K +N+LL G VKL DFGF +
Sbjct: 140 RDIKSDNILLGMDGSVKL----------------------------TDFGFCAQITPEQS 171
Query: 207 KTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
K GTP ++APE++ + + VD W+LGI+ E++ G
Sbjct: 172 KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GG + ++ E TC D+ + + ++ALE+LH+ ++ RD+K +N+LL
Sbjct: 94 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD 152
Query: 61 GYVKL 65
G VKL
Sbjct: 153 GSVKL 157
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 38/172 (22%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCF-DDNAASFITACVIEALDFITACVIEA 135
L+ +++ V ++LE GGE++ L ++ ++ A SFI +++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------------ILDG 127
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ YLHT+ I DLKPEN++L ++ P H + +DF
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNI------PIPHIKL------------------IDF 163
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 164 GLA-HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L ++ + A+ +++ + YLHT+ I DLKPEN++L ++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 61 G----YVKLV 66
++KL+
Sbjct: 152 NIPIPHIKLI 161
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 40/161 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
+++++E GG + ++ E TC D+ I A E L +ALE+LH+ ++
Sbjct: 93 LWVVMEYLAGGSLTDVVTE-TCMDEGQ---IAAVCRECL--------QALEFLHSNQVIH 140
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+K +N+LL G VKL DFGF +
Sbjct: 141 RDIKSDNILLGMDGSVKL----------------------------TDFGFCAQITPEQS 172
Query: 207 KTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
K GTP ++APE++ + + VD W+LGI+ E++ G
Sbjct: 173 KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GG + ++ E TC D+ + + ++ALE+LH+ ++ RD+K +N+LL
Sbjct: 95 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD 153
Query: 61 GYVKL 65
G VKL
Sbjct: 154 GSVKL 158
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 38/172 (22%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCF-DDNAASFITACVIEALDFITACVIEA 135
L+ +++ V ++LE GGE++ L ++ ++ A SFI +++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------------ILDG 127
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ YLHT+ I DLKPEN++L ++ P H + +DF
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNI------PIPHIKL------------------IDF 163
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 164 GLA-HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L ++ + A+ +++ + YLHT+ I DLKPEN++L ++
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 61 G----YVKLV 66
++KL+
Sbjct: 152 NIPIPHIKLI 161
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 62/220 (28%)
Query: 41 HTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVW 100
H+R VFR+++ N+ ++L+ + F+D Y++ E GG +
Sbjct: 52 HSRSRVFREVETLYQCQGNKNILELI------------EFFEDDTRFYLVFEKLQGGSIL 99
Query: 101 TILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 160
++++ F++ AS + V ALDF LHT+GI RDLKPEN+L ++
Sbjct: 100 AHIQKQKHFNEREASRVVRDVAAALDF-----------LHTKGIAHRDLKPENILCESPE 148
Query: 161 YVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV---DFGFSKHLGHS-----GCKTWTFC 212
V VK+ D G L +S + T C
Sbjct: 149 KV--------------------------SPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 213 GTPEYVAPEII-----KNRGHDRAVDYWALGILMHELLTG 247
G+ EY+APE++ + +D+ D W+LG++++ +L+G
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ E GG + ++++ F++ AS + V AL++LHT+GI RDLKPEN+L ++
Sbjct: 88 LVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESP 147
Query: 61 GYVKLV 66
V V
Sbjct: 148 EKVSPV 153
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 40/161 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
+++++E GG + ++ E TC D+ I A E L +ALE+LH+ ++
Sbjct: 92 LWVVMEYLAGGSLTDVVTE-TCMDEGQ---IAAVCRECL--------QALEFLHSNQVIH 139
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+K +N+LL G VKL DFGF +
Sbjct: 140 RDIKSDNILLGMDGSVKL----------------------------TDFGFCAQITPEQS 171
Query: 207 KTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
K GTP ++APE++ + + VD W+LGI+ E++ G
Sbjct: 172 KRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GG + ++ E TC D+ + + ++ALE+LH+ ++ RD+K +N+LL
Sbjct: 94 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD 152
Query: 61 GYVKL 65
G VKL
Sbjct: 153 GSVKL 157
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 45/176 (25%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEV--WTILRERTCFDDNAASFITACVIEALDFITACVI 133
+LY + + ++M+LE C GGE+ + I ++R ++ F ++
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQ-------------IV 118
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
A+ Y+H++G RDLKPENLL D +KL +
Sbjct: 119 SAVAYVHSQGYAHRDLKPENLLFDEYHKLKL----------------------------I 150
Query: 194 DFGF-SKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILMHELLTG 247
DFG +K G+ T CG+ Y APE+I+ + + D W++GIL++ L+ G
Sbjct: 151 DFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M+LE C GGE++ + + + + ++ A+ Y+H++G RDLKPENLL D
Sbjct: 85 MVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEY 144
Query: 61 GYVKLV 66
+KL+
Sbjct: 145 HKLKLI 150
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 40/173 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+ Y ++ +++++E GG +L E D+ + I +++ LD
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLD-------- 118
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
YLH+ + RD+K N+LL G VKL D
Sbjct: 119 ---YLHSEKKIHRDIKAANVLLSEHGEVKL----------------------------AD 147
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + L + K TF GTP ++APE+IK +D D W+LGI EL G
Sbjct: 148 FGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 7 LGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
LGG L E D+ + I +++ L+YLH+ + RD+K N+LL G VKL
Sbjct: 87 LGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 146
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 40/173 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+ Y ++ +++++E GG +L E D+ + I +++ LD
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLD-------- 138
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
YLH+ + RD+K N+LL G VKL D
Sbjct: 139 ---YLHSEKKIHRDIKAANVLLSEHGEVKL----------------------------AD 167
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + L + K TF GTP ++APE+IK +D D W+LGI EL G
Sbjct: 168 FGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 220
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 7 LGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
LGG L E D+ + I +++ L+YLH+ + RD+K N+LL G VKL
Sbjct: 107 LGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 166
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 41/174 (23%)
Query: 77 LYKTFKDSKYVYMLLEACL-GGEVWTILRER--TCFDDNAASFITACVIEALDFITACVI 133
+Y+ K +++ C+ GGE+++ ++ER F + A+ I + A+ F
Sbjct: 90 VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF------ 143
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
LH+ I RD+KPENLL ++ + D+ ++
Sbjct: 144 -----LHSHNIAHRDVKPENLLYTSK-------------------EKDAVLKLT------ 173
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
DFGF+K + +T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 174 DFGFAKETTQNALQT--PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ ++ER F + A+ I + A+++LH+ I RD+KPENLL
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 59 NR 60
++
Sbjct: 163 SK 164
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 41/174 (23%)
Query: 77 LYKTFKDSKYVYMLLEACL-GGEVWTILRER--TCFDDNAASFITACVIEALDFITACVI 133
+Y+ K +++ C+ GGE+++ ++ER F + A+ I + A+ F
Sbjct: 71 VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF------ 124
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
LH+ I RD+KPENLL ++ + D+ ++
Sbjct: 125 -----LHSHNIAHRDVKPENLLYTSK-------------------EKDAVLKLT------ 154
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
DFGF+K + +T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 155 DFGFAKETTQNALQT--PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ ++ER F + A+ I + A+++LH+ I RD+KPENLL
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 59 NR 60
++
Sbjct: 144 SK 145
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 40/173 (23%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCF-DDNAASFITACVIEALDFITACVIEA 135
L+ F++ V ++LE GGE++ L E+ +D A F+ +++
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------------ILDG 127
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH++ I DLKPEN++L ++ + ++K +D
Sbjct: 128 VHYLHSKRIAHFDLKPENIMLLDKN-------------------------VPNPRIKLID 162
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H +G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 163 FGIA-HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
++LE GGE++ L E+ ++ A+ +++ + YLH++ I DLKPEN++L
Sbjct: 92 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 148
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 40/173 (23%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCF-DDNAASFITACVIEALDFITACVIEA 135
L+ F++ V ++LE GGE++ L E+ +D A F+ +++
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------------ILDG 120
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH++ I DLKPEN++L ++ + ++K +D
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKN-------------------------VPNPRIKLID 155
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H +G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 156 FGIA-HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
++LE GGE++ L E+ ++ A+ +++ + YLH++ I DLKPEN++L
Sbjct: 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 141
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 39/165 (23%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 134
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 135 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKETT 169
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
T C TP YVAPE++ +D++ D W+LG++M+ LL G
Sbjct: 170 SHNSLTEP-CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 149
Query: 59 NR 60
++
Sbjct: 150 SK 151
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 40/174 (22%)
Query: 77 LYKTFKDSKYVYMLLEACL-GGEVWTILRER--TCFDDNAASFITACVIEALDFITACVI 133
+Y+ + +++ CL GGE+++ +++R F + AS I + EA+
Sbjct: 123 VYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAI-------- 174
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+YLH+ I RD+KPENLL ++ + ++ ++
Sbjct: 175 ---QYLHSINIAHRDVKPENLLYTSK-------------------RPNAILKLT------ 206
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
DFGF+K T T C TP YVAPE++ +D++ D W+LG++ + LL G
Sbjct: 207 DFGFAKETTSHNSLT-TPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 1 MLLEACL-GGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
+++ CL GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLY 194
Query: 58 DNR 60
++
Sbjct: 195 TSK 197
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 40/173 (23%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCF-DDNAASFITACVIEALDFITACVIEA 135
L+ F++ V ++LE GGE++ L E+ +D A F+ +++
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------------ILDG 141
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH++ I DLKPEN++L ++ + ++K +D
Sbjct: 142 VHYLHSKRIAHFDLKPENIMLLDKN-------------------------VPNPRIKLID 176
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H +G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 177 FGIA-HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
++LE GGE++ L E+ ++ A+ +++ + YLH++ I DLKPEN++L
Sbjct: 106 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 162
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 44/196 (22%)
Query: 63 VKLVSRKKKTRQTRLY------KTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAA-- 114
VK + +K+ R+ L+ + + V M +G E+W ++ F + A
Sbjct: 75 VKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVME----FLEGGALT 130
Query: 115 SFITACVIEALDFITAC--VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHY 172
+T + T C V+ AL YLH +G++ RD+K
Sbjct: 131 DIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK---------------------- 168
Query: 173 IIREGAKGDSFFIISGGQVKV-DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRA 231
DS + S G++K+ DFGF + K GTP ++APE+I +
Sbjct: 169 -------SDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 232 VDYWALGILMHELLTG 247
VD W+LGI++ E++ G
Sbjct: 222 VDIWSLGIMVIEMIDG 237
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 19/160 (11%)
Query: 7 LGGEVWTILR--ERTCFDD-------NAASFITAC--VIEALEYLHTRGIVFRDLKPENL 55
+G E+W ++ E D N T C V+ AL YLH +G++ RD+K +++
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSI 172
Query: 56 LLDNRGYVKL--------VSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERT 107
LL + G +KL VS++ R+ + + + V L ++W++
Sbjct: 173 LLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI 232
Query: 108 CFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
D + ++A+ I + ++ LH V R
Sbjct: 233 EMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLR 272
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 40/173 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+ Y ++ +++++E GG +L E D+ + I +++ LD
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLD-------- 133
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
YLH+ + RD+K N+LL G VKL D
Sbjct: 134 ---YLHSEKKIHRDIKAANVLLSEHGEVKL----------------------------AD 162
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + L + K F GTP ++APE+IK +D D W+LGI EL G
Sbjct: 163 FGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 7 LGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
LGG L E D+ + I +++ L+YLH+ + RD+K N+LL G VKL
Sbjct: 102 LGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 161
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 40/173 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T+ Y ++ +++++E GG +L E D+ + I +++ LD
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLD-------- 118
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
YLH+ + RD+K N+LL G VKL D
Sbjct: 119 ---YLHSEKKIHRDIKAANVLLSEHGEVKL----------------------------AD 147
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + L + K F GTP ++APE+IK +D D W+LGI EL G
Sbjct: 148 FGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 7 LGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
LGG L E D+ + I +++ L+YLH+ + RD+K N+LL G VKL
Sbjct: 87 LGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 146
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 27/171 (15%)
Query: 78 YKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALE 137
Y +F ++++++ GG V I++ ++ + + I I V+E LE
Sbjct: 74 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT---ILREVLEGLE 130
Query: 138 YLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGF 197
YLH G + RD+K N+LL G V++ + G S F+ +GG + +
Sbjct: 131 YLHKNGQIHRDVKAGNILLGEDGSVQIADF------------GVSAFLATGGDITRNKVR 178
Query: 198 SKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
TF GTP ++APE+++ RG+D D W+ GI EL TG
Sbjct: 179 K-----------TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 1 MLLEACLGGEVWTILR--------ERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKP 52
++++ GG V I++ + D++ + I V+E LEYLH G + RD+K
Sbjct: 85 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 144
Query: 53 ENLLLDNRGYVKL 65
N+LL G V++
Sbjct: 145 GNILLGEDGSVQI 157
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 44/179 (24%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
T L+ F+D +Y++++ +GG++ T+L + F+D E F A ++
Sbjct: 137 TTLHYAFQDDNNLYLVMDYYVGGDLLTLLSK---FEDRLPE-------EMARFYLAEMVI 186
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
A++ +H V RD+KP+N+L+D G+++L D
Sbjct: 187 AIDSVHQLHYVHRDIKPDNILMDMNGHIRL----------------------------AD 218
Query: 195 FGFSKHLGHSG-CKTWTFCGTPEYVAPEIIK--NRGHDR---AVDYWALGILMHELLTG 247
FG L G ++ GTP+Y++PEI++ G R D+W+LG+ M+E+L G
Sbjct: 219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 1 MLLEACLGGEVWTILRE-RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++++ +GG++ T+L + + A F A ++ A++ +H V RD+KP+N+L+D
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM 210
Query: 60 RGYVKLV 66
G+++L
Sbjct: 211 NGHIRLA 217
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 27/171 (15%)
Query: 78 YKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALE 137
Y +F ++++++ GG V I++ ++ + + I I V+E LE
Sbjct: 79 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT---ILREVLEGLE 135
Query: 138 YLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGF 197
YLH G + RD+K N+LL G V++ + G S F+ +GG + +
Sbjct: 136 YLHKNGQIHRDVKAGNILLGEDGSVQIADF------------GVSAFLATGGDITRNKVR 183
Query: 198 SKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
TF GTP ++APE+++ RG+D D W+ GI EL TG
Sbjct: 184 K-----------TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 1 MLLEACLGGEVWTILR--------ERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKP 52
++++ GG V I++ + D++ + I V+E LEYLH G + RD+K
Sbjct: 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 149
Query: 53 ENLLLDNRGYVKLV 66
N+LL G V++
Sbjct: 150 GNILLGEDGSVQIA 163
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 40/173 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
TR + ++ S +++++E GG +L+ ++I + E +++
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPL----EETYIATILRE--------ILK 127
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
L+YLH+ + RD+K N+LL +G VKL D
Sbjct: 128 GLDYLHSERKIHRDIKAANVLLSEQGDVKL----------------------------AD 159
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + L + K F GTP ++APE+IK +D D W+LGI EL G
Sbjct: 160 FGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E GG +L+ ++ + I +++ L+YLH+ + RD+K N+LL +
Sbjct: 94 IIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQ 152
Query: 61 GYVKLV 66
G VKL
Sbjct: 153 GDVKLA 158
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 41/230 (17%)
Query: 18 RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRL 77
R C + +++ ++ + G+ DLK E + K L
Sbjct: 41 RRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKRE---------ASICHMLKHPHIVEL 91
Query: 78 YKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALE 137
+T+ +YM+ E G ++ + +R A F+ + + + ++EAL
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRA-----DAGFVYSEAVAS--HYMRQILEALR 144
Query: 138 YLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGF 197
Y H I+ RD+KP +LL +K +S + GG FG
Sbjct: 145 YCHDNNIIHRDVKPHCVLL--------------------ASKENSAPVKLGG-----FGV 179
Query: 198 SKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ LG SG GTP ++APE++K + + VD W G+++ LL+G
Sbjct: 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 39/190 (20%)
Query: 58 DNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFI 117
++R V +++ K + ++F+++ +Y++++ C GG+++ + NA +
Sbjct: 69 ESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI--------NAQKGV 120
Query: 118 TACVIEALD-FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIRE 176
+ LD F+ C+ AL+++H R I+ RD+K +N+ L G V+L
Sbjct: 121 LFQEDQILDWFVQICL--ALKHVHDRKILHRDIKSQNIFLTKDGTVQLG----------- 167
Query: 177 GAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWA 236
DFG ++ L + GTP Y++PEI +N+ ++ D WA
Sbjct: 168 -----------------DFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWA 210
Query: 237 LGILMHELLT 246
LG +++EL T
Sbjct: 211 LGCVLYELCT 220
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAAS--FITACVIEALEYLHTRGIVFRDLKPENLL 56
++++ C GG+++ + + F ++ F+ C+ AL+++H R I+ RD+K +N+
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL--ALKHVHDRKILHRDIKSQNIF 157
Query: 57 LDNRGYVKL 65
L G V+L
Sbjct: 158 LTKDGTVQL 166
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 41/230 (17%)
Query: 18 RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRL 77
R C + +++ ++ + G+ DLK E + K L
Sbjct: 43 RRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKRE---------ASICHMLKHPHIVEL 93
Query: 78 YKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALE 137
+T+ +YM+ E G ++ + +R A F+ + + + ++EAL
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRA-----DAGFVYSEAVAS--HYMRQILEALR 146
Query: 138 YLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGF 197
Y H I+ RD+KP +LL +K +S + GG FG
Sbjct: 147 YCHDNNIIHRDVKPHCVLL--------------------ASKENSAPVKLGG-----FGV 181
Query: 198 SKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ LG SG GTP ++APE++K + + VD W G+++ LL+G
Sbjct: 182 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 29/122 (23%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F A + LE LH IV+RDLKPEN+LLD+ G++++
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRIS--------------------- 328
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
D G + H+ G GT Y+APE++KN + + D+WALG L++E++
Sbjct: 329 -------DLGLAVHVPE-GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
Query: 247 GM 248
G
Sbjct: 381 GQ 382
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
F + A F A + LE LH IV+RDLKPEN+LLD+ G++++
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRI 327
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 50/173 (28%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E GG + + + +R F++ AS + V ALDF LH +GI R
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDF-----------LHNKGIAHR 135
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV-DFGFSKHLGHSG- 205
DLKPEN+L ++ V VK+ DFG + +G
Sbjct: 136 DLKPENILCEHPNQVS--------------------------PVKICDFGLGSGIKLNGD 169
Query: 206 CKT------WTFCGTPEYVAPEIIKNRG-----HDRAVDYWALGILMHELLTG 247
C T CG+ EY+APE+++ +D+ D W+LG++++ LL+G
Sbjct: 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ E GG + + + +R F++ AS + V AL++LH +GI RDLKPEN+L ++
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHP 147
Query: 61 GYVKLV 66
V V
Sbjct: 148 NQVSPV 153
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 29/122 (23%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F A + LE LH IV+RDLKPEN+LLD+ G++++
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRIS--------------------- 328
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
D G + H+ G GT Y+APE++KN + + D+WALG L++E++
Sbjct: 329 -------DLGLAVHVPE-GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
Query: 247 GM 248
G
Sbjct: 381 GQ 382
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
F + A F A + LE LH IV+RDLKPEN+LLD+ G++++
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRI 327
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 38/193 (19%)
Query: 63 VKLVSRKKKTRQTRLY------KTFKDSKYVYMLLEACLGGEVWTILR--ERTCFDDNAA 114
VK + +K+ R+ L+ + ++ V M +G E+W ++ E D
Sbjct: 50 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 109
Query: 115 SFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYII 174
T E + + V++AL LH +G++ RD+K +++LL + G VKL
Sbjct: 110 H--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS--------- 158
Query: 175 REGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDY 234
DFGF + + GTP ++APE+I + VD
Sbjct: 159 -------------------DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 199
Query: 235 WALGILMHELLTG 247
W+LGI++ E++ G
Sbjct: 200 WSLGIMVIEMVDG 212
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 7 LGGEVWTILR-----------ERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENL 55
+G E+W ++ T ++ + + V++AL LH +G++ RD+K +++
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 147
Query: 56 LLDNRGYVKL 65
LL + G VKL
Sbjct: 148 LLTHDGRVKL 157
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 34/165 (20%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E GG + + + +R F++ AS + V ALDF LH +GI R
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDF-----------LHNKGIAHR 135
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCK 207
DLKPEN+L ++ V K F + SG ++ D S +
Sbjct: 136 DLKPENILCEHPNQVS-------------PVKICDFDLGSGIKLNGDCS-----PISTPE 177
Query: 208 TWTFCGTPEYVAPEIIKNRG-----HDRAVDYWALGILMHELLTG 247
T CG+ EY+APE+++ +D+ D W+LG++++ LL+G
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ E GG + + + +R F++ AS + V AL++LH +GI RDLKPEN+L ++
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHP 147
Query: 61 GYVKLV 66
V V
Sbjct: 148 NQVSPV 153
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 42/195 (21%)
Query: 63 VKLVSRKKKTRQTRLY------KTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAA-- 114
VK + +K+ R+ L+ + ++ V M +G E+W ++ F + A
Sbjct: 61 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME----FLEGGALT 116
Query: 115 SFITACVIEALDFITAC--VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHY 172
+T + C V++AL LH +G++ RD+K +++LL + G VKL
Sbjct: 117 DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS------- 169
Query: 173 IIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
DFGF + + GTP ++APE+I + V
Sbjct: 170 ---------------------DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 233 DYWALGILMHELLTG 247
D W+LGI++ E++ G
Sbjct: 209 DIWSLGIMVIEMVDG 223
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 7 LGGEVWTILR-----------ERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENL 55
+G E+W ++ T ++ + + V++AL LH +G++ RD+K +++
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 158
Query: 56 LLDNRGYVKL 65
LL + G VKL
Sbjct: 159 LLTHDGRVKL 168
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 46/180 (25%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRE-RTCFDDNAASFITACVIEALDFITACVI 133
T L+ F+D ++Y++++ +GG++ T+L + ++ A F ++ A+D I
Sbjct: 137 TALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAID-----SI 191
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
L Y+H RD+KP+N+LLD G+++L
Sbjct: 192 HQLHYVH------RDIKPDNVLLDVNGHIRL----------------------------A 217
Query: 194 DFGFSKHLGHSG-CKTWTFCGTPEYVAPEIIKNR-----GHDRAVDYWALGILMHELLTG 247
DFG + G ++ GTP+Y++PEI++ + D+W+LG+ M+E+L G
Sbjct: 218 DFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 1 MLLEACLGGEVWTILRE-RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++++ +GG++ T+L + ++ A F ++ A++ +H V RD+KP+N+LLD
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 210
Query: 60 RGYVKLV 66
G+++L
Sbjct: 211 NGHIRLA 217
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 42/195 (21%)
Query: 63 VKLVSRKKKTRQTRLY------KTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAA-- 114
VK + +K+ R+ L+ + ++ V M +G E+W ++ F + A
Sbjct: 104 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME----FLEGGALT 159
Query: 115 SFITACVIEALDFITAC--VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHY 172
+T + C V++AL LH +G++ RD+K +++LL + G VKL
Sbjct: 160 DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS------- 212
Query: 173 IIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
DFGF + + GTP ++APE+I + V
Sbjct: 213 ---------------------DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 233 DYWALGILMHELLTG 247
D W+LGI++ E++ G
Sbjct: 252 DIWSLGIMVIEMVDG 266
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 7 LGGEVWTILR-----------ERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENL 55
+G E+W ++ T ++ + + V++AL LH +G++ RD+K +++
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 201
Query: 56 LLDNRGYVKL 65
LL + G VKL
Sbjct: 202 LLTHDGRVKL 211
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 42/195 (21%)
Query: 63 VKLVSRKKKTRQTRLY------KTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAA-- 114
VK + +K+ R+ L+ + ++ V M +G E+W ++ F + A
Sbjct: 59 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME----FLEGGALT 114
Query: 115 SFITACVIEALDFITAC--VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHY 172
+T + C V++AL LH +G++ RD+K +++LL + G VKL
Sbjct: 115 DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS------- 167
Query: 173 IIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
DFGF + + GTP ++APE+I + V
Sbjct: 168 ---------------------DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 233 DYWALGILMHELLTG 247
D W+LGI++ E++ G
Sbjct: 207 DIWSLGIMVIEMVDG 221
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 7 LGGEVWTILR-----------ERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENL 55
+G E+W ++ T ++ + + V++AL LH +G++ RD+K +++
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 156
Query: 56 LLDNRGYVKL 65
LL + G VKL
Sbjct: 157 LLTHDGRVKL 166
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 38/193 (19%)
Query: 63 VKLVSRKKKTRQTRLY------KTFKDSKYVYMLLEACLGGEVWTILR--ERTCFDDNAA 114
VK + +K+ R+ L+ + ++ V M +G E+W ++ E D
Sbjct: 54 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 113
Query: 115 SFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYII 174
T E + + V++AL LH +G++ RD+K +++LL + G VKL
Sbjct: 114 H--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS--------- 162
Query: 175 REGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDY 234
DFGF + + GTP ++APE+I + VD
Sbjct: 163 -------------------DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 203
Query: 235 WALGILMHELLTG 247
W+LGI++ E++ G
Sbjct: 204 WSLGIMVIEMVDG 216
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 7 LGGEVWTILR-----------ERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENL 55
+G E+W ++ T ++ + + V++AL LH +G++ RD+K +++
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 151
Query: 56 LLDNRGYVKL 65
LL + G VKL
Sbjct: 152 LLTHDGRVKL 161
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 46/180 (25%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRE-RTCFDDNAASFITACVIEALDFITACVI 133
T L+ F+D ++Y++++ +GG++ T+L + ++ A F ++ A+D I
Sbjct: 153 TALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAID-----SI 207
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
L Y+H RD+KP+N+LLD G+++L
Sbjct: 208 HQLHYVH------RDIKPDNVLLDVNGHIRL----------------------------A 233
Query: 194 DFGFSKHLGHSG-CKTWTFCGTPEYVAPEIIKNR-----GHDRAVDYWALGILMHELLTG 247
DFG + G ++ GTP+Y++PEI++ + D+W+LG+ M+E+L G
Sbjct: 234 DFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 1 MLLEACLGGEVWTILRE-RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
++++ +GG++ T+L + ++ A F ++ A++ +H V RD+KP+N+LLD
Sbjct: 167 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 226
Query: 60 RGYVKLV 66
G+++L
Sbjct: 227 NGHIRLA 233
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 54/245 (22%)
Query: 7 LGGEVWTIL---RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYV 63
LG V+ ++ RE++ AA FI ++ RG+ D++ E +L +
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHP 74
Query: 64 KLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIE 123
+++ L++ +++ V ++LE GGE++ L E+ + E
Sbjct: 75 NVIT---------LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------E 115
Query: 124 ALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSF 183
A +F+ ++ + YLH+ I DLKPEN++L +R K
Sbjct: 116 ATEFLKQ-ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------- 154
Query: 184 FIISGGQVK-VDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
++K +DFG + H G + GTPE+VAPEI+ D W++G++ +
Sbjct: 155 -----PRIKIIDFGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 243 ELLTG 247
LL+G
Sbjct: 209 ILLSG 213
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 61 GYVK 64
K
Sbjct: 151 NVPK 154
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 38/172 (22%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RLY+TF+D+ +Y+++E C GGE++ + + F ++ A+ I V+ A
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-----------RIMKDVLSA 135
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ Y H + RDLKPEN L L P DS + +DF
Sbjct: 136 VAYCHKLNVAHRDLKPENFLF-------LTDSP------------DSPLKL------IDF 170
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G + G T GTP YV+P++++ + D W+ G++M+ LL G
Sbjct: 171 GLAARF-KPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCG 220
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
+++E C GGE++ + + F ++ A+ I V+ A+ Y H + RDLKPEN L
Sbjct: 100 LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLF 156
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 38/172 (22%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RLY+TF+D+ +Y+++E C GGE++ + + F ++ A+ I V+ A
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-----------RIMKDVLSA 118
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ Y H + RDLKPEN L L P DS + +DF
Sbjct: 119 VAYCHKLNVAHRDLKPENFLF-------LTDSP------------DSPLKL------IDF 153
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G + G T GTP YV+P++++ + D W+ G++M+ LL G
Sbjct: 154 GLAARF-KPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCG 203
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
+++E C GGE++ + + F ++ A+ I V+ A+ Y H + RDLKPEN L
Sbjct: 83 LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLF 139
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 42/195 (21%)
Query: 63 VKLVSRKKKTRQTRLY------KTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAA-- 114
VK + +K+ R+ L+ + ++ V M +G E+W ++ F + A
Sbjct: 181 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME----FLEGGALT 236
Query: 115 SFITACVIEALDFITAC--VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHY 172
+T + C V++AL LH +G++ RD+K +++LL + G VKL
Sbjct: 237 DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS------- 289
Query: 173 IIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
DFGF + + GTP ++APE+I + V
Sbjct: 290 ---------------------DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 233 DYWALGILMHELLTG 247
D W+LGI++ E++ G
Sbjct: 329 DIWSLGIMVIEMVDG 343
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 7 LGGEVWTILR-----------ERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENL 55
+G E+W ++ T ++ + + V++AL LH +G++ RD+K +++
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 278
Query: 56 LLDNRGYVKL 65
LL + G VKL
Sbjct: 279 LLTHDGRVKL 288
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 31 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 78
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 79 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R K ++K +D
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------------PRIKIID 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 162 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 61 GYVK 64
K
Sbjct: 151 NVPK 154
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 31 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 78
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 79 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R + ++K +D
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN-------------------------VPKPRIKIID 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 162 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 61 GYVK 64
K
Sbjct: 151 NVPK 154
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 31 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 78
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 79 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R K ++K +D
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------------PRIKIID 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 162 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 61 GYVK 64
K
Sbjct: 151 NVPK 154
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 31 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 78
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 79 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R K ++K +D
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------------PRIKIID 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 162 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 61 GYVK 64
K
Sbjct: 151 NVPK 154
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 82/189 (43%), Gaps = 47/189 (24%)
Query: 61 GYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWT-ILRERTCFDDNAASFITA 119
Y+KL+ + +LY + M++E GGE++ I+ ++ +D F
Sbjct: 61 SYLKLL---RHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQ 116
Query: 120 CVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAK 179
+I A+EY H IV RDLKPENLLLD+ VK+
Sbjct: 117 ------------IICAIEYCHRHKIVHRDLKPENLLLDDNLNVKI--------------- 149
Query: 180 GDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALG 238
DFG S ++ G T CG+P Y APE+I + + VD W+ G
Sbjct: 150 -------------ADFGLS-NIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCG 195
Query: 239 ILMHELLTG 247
I+++ +L G
Sbjct: 196 IVLYVMLVG 204
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
GGE++ + E+ ++ +I A+EY H IV RDLKPENLLLD+ VK+
Sbjct: 92 GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKI 149
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 31 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 78
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 79 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R K ++K +D
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------------PRIKIID 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 162 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 61 GYVK 64
K
Sbjct: 151 NVPK 154
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 31 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 78
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 79 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R K ++K +D
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------------PRIKIID 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 162 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 61 GYVK 64
K
Sbjct: 151 NVPK 154
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 31 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 78
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 79 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R K ++K +D
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------------PRIKIID 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 162 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 61 GYVK 64
K
Sbjct: 151 NVPK 154
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 31 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 78
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 79 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R + ++K +D
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN-------------------------VPKPRIKIID 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 162 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 61 GYVK 64
K
Sbjct: 151 NVPK 154
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 30 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 77
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 78 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 125
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R K ++K +D
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------------PRIKIID 160
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 161 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149
Query: 61 GYVK 64
K
Sbjct: 150 NVPK 153
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 30 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 77
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 78 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 125
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R K ++K +D
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------------PRIKIID 160
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 161 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149
Query: 61 GYVK 64
K
Sbjct: 150 NVPK 153
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 31 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 78
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 79 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R K ++K +D
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------------PRIKIID 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 162 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 61 GYVK 64
K
Sbjct: 151 NVPK 154
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 65/218 (29%)
Query: 46 VFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTIL-- 103
+ R+LK N++ R Y +++ R T +Y+++E C GG++ +++
Sbjct: 58 LLRELKHPNIV---RYYDRIIDRTNTT--------------LYIVMEYCEGGDLASVITK 100
Query: 104 --RERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG-----IVFRDLKPENLLL 156
+ER D+ F+ L +T + AL+ H R ++ RDLKP N+ L
Sbjct: 101 GTKERQYLDE---EFV-------LRVMTQLTL-ALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 157 DNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPE 216
D + VKL DFG ++ L H TF GTP
Sbjct: 150 DGKQNVKLG----------------------------DFGLARILNHDTSFAKTFVGTPY 181
Query: 217 YVAPEIIKNRGHDRAVDYWALGILMHELLTGMKESNVF 254
Y++PE + ++ D W+LG L++EL M F
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 219
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 1 MLLEACLGGEVWTIL----RERTCFDDNAASFITACVIEALEYLHTRG-----IVFRDLK 51
+++E C GG++ +++ +ER D+ + + AL+ H R ++ RDLK
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 52 PENLLLDNRGYVKL 65
P N+ LD + VKL
Sbjct: 144 PANVFLDGKQNVKL 157
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 42/174 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTI--LRERTCFDDNAASFITACVIEALDFITACVI 133
+ Y ++ + +++++E C G V I LR +T +D A+ + + +
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQST------------L 135
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+ LEYLH + RD+K N+LL+ G+ KL
Sbjct: 136 KGLEYLHFMRKIHRDIKAGNILLNTEGHAKL----------------------------A 167
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
DFG + L K GTP ++APE+I+ G++ D W+LGI E+ G
Sbjct: 168 DFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG 221
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 1 MLLEACLGGEVWTI--LRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E C G V I LR +T +D A+ + + ++ LEYLH + RD+K N+LL+
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQST-LKGLEYLHFMRKIHRDIKAGNILLN 159
Query: 59 NRGYVKL 65
G+ KL
Sbjct: 160 TEGHAKL 166
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 42/171 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+LY K + M++E G E++ + +R + EA F +I A
Sbjct: 68 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQ----------EARRFFQQ-IISA 115
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+EY H IV RDLKPENLLLD VK+ DF
Sbjct: 116 VEYCHRHKIVHRDLKPENLLLDEHLNVKI----------------------------ADF 147
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILMHELL 245
G S ++ G T CG+P Y APE+I + + VD W+ G++++ +L
Sbjct: 148 GLS-NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 197
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
G E++ + +R + A +I A+EY H IV RDLKPENLLLD VK+
Sbjct: 87 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKI 144
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 42/171 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+LY K + M++E G E++ + +R + EA F +I A
Sbjct: 77 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQ----------EARRFFQQ-IISA 124
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+EY H IV RDLKPENLLLD VK+ DF
Sbjct: 125 VEYCHRHKIVHRDLKPENLLLDEHLNVKI----------------------------ADF 156
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILMHELL 245
G S ++ G T CG+P Y APE+I + + VD W+ G++++ +L
Sbjct: 157 GLS-NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 206
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
G E++ + +R + A +I A+EY H IV RDLKPENLLLD VK+
Sbjct: 96 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKI 153
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 42/171 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+LY K + M++E G E++ + +R + EA F +I A
Sbjct: 78 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQ----------EARRFFQQ-IISA 125
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+EY H IV RDLKPENLLLD VK+ DF
Sbjct: 126 VEYCHRHKIVHRDLKPENLLLDEHLNVKI----------------------------ADF 157
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILMHELL 245
G S ++ G T CG+P Y APE+I + + VD W+ G++++ +L
Sbjct: 158 GLS-NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 207
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
G E++ + +R + A +I A+EY H IV RDLKPENLLLD VK+
Sbjct: 97 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKI 154
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 42/171 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+LY K + M++E G E++ + +R + EA F +I A
Sbjct: 72 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQ----------EARRFFQQ-IISA 119
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+EY H IV RDLKPENLLLD VK+ DF
Sbjct: 120 VEYCHRHKIVHRDLKPENLLLDEHLNVKI----------------------------ADF 151
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILMHELL 245
G S ++ G T CG+P Y APE+I + + VD W+ G++++ +L
Sbjct: 152 GLS-NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 201
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
G E++ + +R + A +I A+EY H IV RDLKPENLLLD VK+
Sbjct: 91 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKI 148
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 147
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 148 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 42/175 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMAG 117
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ YLH GI RD+KPENLLLD R +K+ DF
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------DF 149
Query: 196 GFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
G + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 61 GYVKL 65
+K+
Sbjct: 142 DNLKI 146
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 116
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 148
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 149 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 61 GYVKL 65
+K+
Sbjct: 142 DNLKI 146
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 116
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 148
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 149 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 61 GYVKL 65
+K+
Sbjct: 142 DNLKI 146
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 116
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 148
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 149 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 61 GYVKL 65
+K+
Sbjct: 142 DNLKI 146
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 147
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 148 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 42/175 (24%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMAG 116
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ YLH GI RD+KPENLLLD R +K+ DF
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------DF 148
Query: 196 GFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
G + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 114
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 115 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 146
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 147 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 80 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 139
Query: 61 GYVKL 65
+K+
Sbjct: 140 DNLKI 144
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 147
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 148 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 116
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 148
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 149 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 61 GYVKL 65
+K+
Sbjct: 142 DNLKI 146
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 147
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 148 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 147
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 148 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 147
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 148 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 116
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 148
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 149 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 61 GYVKL 65
+K+
Sbjct: 142 DNLKI 146
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 116
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 148
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 149 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 61 GYVKL 65
+K+
Sbjct: 142 DNLKI 146
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 147
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + CGT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 148 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 38/185 (20%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
V+L+ + +L++ +DS Y++ E GGE++ + +R F ++ A+ I V
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF 131
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ Y+H IV RDLKPEN+LL E + D
Sbjct: 132 SGI-----------TYMHKHNIVHRDLKPENILL-------------------ESKEKDC 161
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
I +DFG S K GT Y+APE+++ +D D W+ G++++
Sbjct: 162 DIKI------IDFGLSTCF-QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILY 213
Query: 243 ELLTG 247
LL+G
Sbjct: 214 ILLSG 218
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 4 EACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
E GGE++ + +R F ++ A+ I V + Y+H IV RDLKPEN+LL+++
Sbjct: 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK 157
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 38/163 (23%)
Query: 89 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE--ALDFITACVIEALEYLHTRGIVF 146
+ +E C GG++ L + F C ++ + + + + AL YLH I+
Sbjct: 96 LAMEYCEGGDLRKYLNQ----------FENCCGLKEGPIRTLLSDISSALRYLHENRIIH 145
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RDLKPEN++L P +I + +D G++K L
Sbjct: 146 RDLKPENIVLQ----------PGPQRLIHK---------------IIDLGYAKELDQGEL 180
Query: 207 KTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMK 249
T F GT +Y+APE+++ + + VDYW+ G L E +TG +
Sbjct: 181 CT-EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 1 MLLEACLGGEVWTILR--ERTC-FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
+ +E C GG++ L E C + + + + AL YLH I+ RDLKPEN++L
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 38/163 (23%)
Query: 89 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE--ALDFITACVIEALEYLHTRGIVF 146
+ +E C GG++ L + F C ++ + + + + AL YLH I+
Sbjct: 95 LAMEYCEGGDLRKYLNQ----------FENCCGLKEGPIRTLLSDISSALRYLHENRIIH 144
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RDLKPEN++L P +I + +D G++K L
Sbjct: 145 RDLKPENIVLQ----------PGPQRLIHK---------------IIDLGYAKELDQGEL 179
Query: 207 KTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMK 249
T F GT +Y+APE+++ + + VDYW+ G L E +TG +
Sbjct: 180 CT-EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 1 MLLEACLGGEVWTILR--ERTC-FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
+ +E C GG++ L E C + + + + AL YLH I+ RDLKPEN++L
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 65/218 (29%)
Query: 46 VFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTIL-- 103
+ R+LK N++ R Y +++ R T +Y+++E C GG++ +++
Sbjct: 58 LLRELKHPNIV---RYYDRIIDRTNTT--------------LYIVMEYCEGGDLASVITK 100
Query: 104 --RERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG-----IVFRDLKPENLLL 156
+ER D+ F+ L +T + AL+ H R ++ RDLKP N+ L
Sbjct: 101 GTKERQYLDE---EFV-------LRVMTQLTL-ALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 157 DNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPE 216
D + VKL DFG ++ L H F GTP
Sbjct: 150 DGKQNVKLG----------------------------DFGLARILNHDTSFAKAFVGTPY 181
Query: 217 YVAPEIIKNRGHDRAVDYWALGILMHELLTGMKESNVF 254
Y++PE + ++ D W+LG L++EL M F
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 219
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 1 MLLEACLGGEVWTIL----RERTCFDDNAASFITACVIEALEYLHTRG-----IVFRDLK 51
+++E C GG++ +++ +ER D+ + + AL+ H R ++ RDLK
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 52 PENLLLDNRGYVKL 65
P N+ LD + VKL
Sbjct: 144 PANVFLDGKQNVKL 157
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 31 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 78
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++LE GGE++ L E+ + EA +F+ ++
Sbjct: 79 -LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R K ++K +D
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------------PRIKIID 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTP +VAPEI+ D W++G++ + LL+G
Sbjct: 162 FGLA-HKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++LE GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 61 GYVK 64
K
Sbjct: 151 NVPK 154
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 41/173 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+LY+ +M++E GGE++ + + ++ A + ++ A+D
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD--------- 125
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
Y H +V RDLKPEN+LLD K+ DF
Sbjct: 126 --YCHRHMVVHRDLKPENVLLDAHMNAKI----------------------------ADF 155
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILMHELLTG 247
G S + G T CG+P Y APE+I R + VD W+ G++++ LL G
Sbjct: 156 GLSNMMS-DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
M++E GGE++ + + ++ A + ++ A++Y H +V RDLKPEN+LLD
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 19/129 (14%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++EAL Y+H++GI+ RDLKP N+ +D VK+ + + R S +
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR-----------SLDIL 173
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILMHELL----T 246
K+D S++L S + GT YVA E++ GH + +D ++LGI+ E++ T
Sbjct: 174 KLD---SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
Query: 247 GMKESNVFQ 255
GM+ N+ +
Sbjct: 231 GMERVNILK 239
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++EAL Y+H++GI+ RDLKP N+ +D VK+
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKI 157
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 38/185 (20%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
V+L+ + +L++ +DS Y++ E GGE++ + +R F ++ A+ I V
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF 131
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ Y+H IV RDLKPEN+LL E + D
Sbjct: 132 SGI-----------TYMHKHNIVHRDLKPENILL-------------------ESKEKDC 161
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
I +DFG S K GT Y+APE+++ +D D W+ G++++
Sbjct: 162 DIKI------IDFGLSTCF-QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILY 213
Query: 243 ELLTG 247
LL+G
Sbjct: 214 ILLSG 218
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 4 EACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
E GGE++ + +R F ++ A+ I V + Y+H IV RDLKPEN+LL+++
Sbjct: 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK 157
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 19/129 (14%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++EAL Y+H++GI+ RDLKP N+ +D VK+ + + R S +
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR-----------SLDIL 173
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILMHELL----T 246
K+D S++L S + GT YVA E++ GH + +D ++LGI+ E++ T
Sbjct: 174 KLD---SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
Query: 247 GMKESNVFQ 255
GM+ N+ +
Sbjct: 231 GMERVNILK 239
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++EAL Y+H++GI+ RDLKP N+ +D VK+
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKI 157
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 38/185 (20%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
V+L+ + +L++ +DS Y++ E GGE++ + +R F ++ A+ I V
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF 131
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ Y+H IV RDLKPEN+LL E + D
Sbjct: 132 SGI-----------TYMHKHNIVHRDLKPENILL-------------------ESKEKDC 161
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
I +DFG S K GT Y+APE+++ +D D W+ G++++
Sbjct: 162 DIKI------IDFGLSTCF-QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILY 213
Query: 243 ELLTG 247
LL+G
Sbjct: 214 ILLSG 218
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 4 EACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
E GGE++ + +R F ++ A+ I V + Y+H IV RDLKPEN+LL+++
Sbjct: 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK 157
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 41/173 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+LY+ ++M++E GGE++ + + D+ + + ++ +D
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVD--------- 130
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
Y H +V RDLKPEN+LLD K+ DF
Sbjct: 131 --YCHRHMVVHRDLKPENVLLDAHMNAKI----------------------------ADF 160
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILMHELLTG 247
G S + G CG+P Y APE+I R + VD W+ G++++ LL G
Sbjct: 161 GLSNMMS-DGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCG 212
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E GGE++ + + D+ + + ++ ++Y H +V RDLKPEN+LLD
Sbjct: 93 MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAH 152
Query: 61 GYVKL 65
K+
Sbjct: 153 MNAKI 157
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 51/233 (21%)
Query: 16 RERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQT 75
RE++ AA FI ++ RG+ D++ E +L + +++
Sbjct: 31 REKSTGLQYAAKFIKKRRTKS----SRRGVSREDIEREVSILKEIQHPNVIT-------- 78
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
L++ +++ V ++ E GGE++ L E+ + EA +F+ ++
Sbjct: 79 -LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE----------EATEFLKQ-ILNG 126
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK-VD 194
+ YLH+ I DLKPEN++L +R K ++K +D
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPK-------------------------PRIKIID 161
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
FG + H G + GTPE+VAPEI+ D W++G++ + LL+G
Sbjct: 162 FGLA-HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 4 EACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYV 63
E GGE++ L E+ + A+ ++ + YLH+ I DLKPEN++L +R
Sbjct: 94 ELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVP 153
Query: 64 K 64
K
Sbjct: 154 K 154
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 34/172 (19%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
++++ F+D +Y+++E C GGE L ER ++ + L ++ A
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGE----LLERIVSAQARGKALSEGYVAEL---MKQMMNA 136
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
L Y H++ +V +DLKPEN+L + + H I+ +DF
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDT---------SPHSPIK----------------IIDF 171
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
G ++ L S + GT Y+APE+ K R D W+ G++M+ LLTG
Sbjct: 172 GLAE-LFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTG 221
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 1 MLLEACLGGE-----VWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENL 55
+++E C GGE V R + + A + ++ AL Y H++ +V +DLKPEN+
Sbjct: 97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ-MMNALAYFHSQHVVHKDLKPENI 155
Query: 56 LLDN 59
L +
Sbjct: 156 LFQD 159
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 65/218 (29%)
Query: 46 VFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTIL-- 103
+ R+LK N++ R Y +++ R T +Y+++E C GG++ +++
Sbjct: 58 LLRELKHPNIV---RYYDRIIDRTNTT--------------LYIVMEYCEGGDLASVITK 100
Query: 104 --RERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG-----IVFRDLKPENLLL 156
+ER D+ F+ L +T + AL+ H R ++ RDLKP N+ L
Sbjct: 101 GTKERQYLDE---EFV-------LRVMTQLTL-ALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 157 DNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPE 216
D + VKL DFG ++ L H F GTP
Sbjct: 150 DGKQNVKLG----------------------------DFGLARILNHDEDFAKEFVGTPY 181
Query: 217 YVAPEIIKNRGHDRAVDYWALGILMHELLTGMKESNVF 254
Y++PE + ++ D W+LG L++EL M F
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 219
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 1 MLLEACLGGEVWTIL----RERTCFDDNAASFITACVIEALEYLHTRG-----IVFRDLK 51
+++E C GG++ +++ +ER D+ + + AL+ H R ++ RDLK
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 52 PENLLLDNRGYVKL 65
P N+ LD + VKL
Sbjct: 144 PANVFLDGKQNVKL 157
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 58 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 108
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 109 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 168
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 169 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 197
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTG 221
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 164
Query: 62 YVKLV 66
+K++
Sbjct: 165 ELKIL 169
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 62 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 112
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 113 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 172
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 173 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 201
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTG 225
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 168
Query: 62 YVKLV 66
+K++
Sbjct: 169 ELKIL 173
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + F T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMAGFVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + F T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMAGFVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 52 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 102
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 103 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + F T Y APEI+
Sbjct: 163 ----------------------------LDFGLARH---TDDEMAGFVATRWYRAPEIML 191
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTG 215
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 62 YVKLV 66
+K++
Sbjct: 159 ELKIL 163
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 41/173 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
+LY+ +M++E GGE++ + + ++ A + ++ A+D
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD--------- 125
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
Y H +V RDLKPEN+LLD K+ DF
Sbjct: 126 --YCHRHMVVHRDLKPENVLLDAHMNAKI----------------------------ADF 155
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILMHELLTG 247
G S + G CG+P Y APE+I R + VD W+ G++++ LL G
Sbjct: 156 GLSNMMS-DGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
M++E GGE++ + + ++ A + ++ A++Y H +V RDLKPEN+LLD
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 67 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 117
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 118 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 177
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 178 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 206
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTG 230
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 173
Query: 62 YVKLV 66
+K++
Sbjct: 174 ELKIL 178
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 63 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 113
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 114 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 174 ----------------------------LDFGLARH---TADEMTGYVATRWYRAPEIML 202
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTG 226
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 62 YVKLV 66
+K++
Sbjct: 170 ELKIL 174
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 61 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 111
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 112 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 172 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 200
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTG 224
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 167
Query: 62 YVKLV 66
+K++
Sbjct: 168 ELKIL 172
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 61 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 111
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 112 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 172 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 200
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTG 224
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 167
Query: 62 YVKLV 66
+K++
Sbjct: 168 ELKIL 172
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 63 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 113
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 114 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 174 ----------------------------LDFGLARH---TADEMTGYVATRWYRAPEIML 202
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTG 226
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 62 YVKLV 66
+K++
Sbjct: 170 ELKIL 174
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 63 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 113
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 114 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 174 ----------------------------LDFGLARH---TADEMTGYVATRWYRAPEIML 202
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTG 226
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 62 YVKLV 66
+K++
Sbjct: 170 ELKIL 174
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 51/202 (25%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD------- 111
+R + ++ K+ R+ RL K K + +L +V+T R F+D
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFNDVYLVTHL 108
Query: 112 -----NAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEF 166
N + + F+ ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 109 MGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI-- 166
Query: 167 YPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNR 226
+DFG ++H + + + T Y APEI+ N
Sbjct: 167 --------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIMLNW 197
Query: 227 GH-DRAVDYWALGILMHELLTG 247
H ++ VD W++G +M ELLTG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTG 219
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDX 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 43/201 (21%)
Query: 49 DLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTC 108
D K E L D + +++ +L F +++L+E C GG V ++ E
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--- 127
Query: 109 FDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYP 168
+T I+ + ++AL YLH I+ RDLK N+L G +KL
Sbjct: 128 ----LERPLTESQIQV---VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKL---- 176
Query: 169 AGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII----- 223
DFG S + + +F GTP ++APE++
Sbjct: 177 ------------------------ADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 224 KNRGHDRAVDYWALGILMHEL 244
K+R +D D W+LGI + E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 1 MLLEACLGGEVWTILRE-RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
+L+E C GG V ++ E ++ + ++AL YLH I+ RDLK N+L
Sbjct: 111 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL 170
Query: 60 RGYVKLVS---RKKKTRQTRLYKTFKDSKY 86
G +KL K TR + +F + Y
Sbjct: 171 DGDIKLADFGVSAKNTRTIQRRDSFIGTPY 200
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 79 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 129
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 130 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 190 ----------------------------LDFGLARH---TDDEMXGYVATRWYRAPEIML 218
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTG 242
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 185
Query: 62 YVKLV 66
+K++
Sbjct: 186 ELKIL 190
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 79 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 129
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 130 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 190 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 218
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTG 242
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 185
Query: 62 YVKLV 66
+K++
Sbjct: 186 ELKIL 190
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 76 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 126
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 127 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 187 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 215
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTG 239
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Query: 62 YVKLV 66
+K++
Sbjct: 183 ELKIL 187
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 75 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 125
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 126 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 186 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 214
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTG 238
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 181
Query: 62 YVKLV 66
+K++
Sbjct: 182 ELKIL 186
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 62 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 112
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 113 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 173 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 201
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTG 225
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Query: 62 YVKLV 66
+K++
Sbjct: 169 ELKIL 173
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 147
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + GT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 148 FGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 147
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + GT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 148 FGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 61 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 111
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 112 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 172 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 200
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTG 224
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 167
Query: 62 YVKLV 66
+K++
Sbjct: 168 ELKIL 172
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 58 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 108
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 109 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 169 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 197
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTG 221
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Query: 62 YVKLV 66
+K++
Sbjct: 165 ELKIL 169
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 62 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 112
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 113 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 173 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 201
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTG 225
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Query: 62 YVKLV 66
+K++
Sbjct: 169 ELKIL 173
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 58 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 108
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 109 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 169 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 197
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTG 221
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Query: 62 YVKLV 66
+K++
Sbjct: 165 ELKIL 169
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 68 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 118
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 119 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 179 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 207
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTG 231
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Query: 62 YVKLV 66
+K++
Sbjct: 175 ELKIL 179
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 62 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 112
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 113 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 173 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 201
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTG 225
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
Query: 62 YVKLV 66
+K++
Sbjct: 169 ELKIL 173
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 116
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 148
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + GT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 149 FGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 61 GYVKL 65
+K+
Sbjct: 142 DNLKI 146
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 68 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 118
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 119 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 179 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 207
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTG 231
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Query: 62 YVKLV 66
+K++
Sbjct: 175 ELKIL 179
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 58 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 108
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 109 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 169 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 197
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTG 221
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
Query: 62 YVKLV 66
+K++
Sbjct: 165 ELKIL 169
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 66 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 116
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 117 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 176
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 177 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 205
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTG 229
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 114 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 172
Query: 62 YVKLV 66
+K++
Sbjct: 173 ELKIL 177
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 67 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 117
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 118 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 177
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 178 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 206
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTG 230
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 173
Query: 62 YVKLV 66
+K++
Sbjct: 174 ELKIL 178
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 63 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 113
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 114 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 174 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 202
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTG 226
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
Query: 62 YVKLV 66
+K++
Sbjct: 170 ELKIL 174
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 75 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 125
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 126 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 186 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 214
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTG 238
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 181
Query: 62 YVKLV 66
+K++
Sbjct: 182 ELKIL 186
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 61 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 111
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 112 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 172 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 200
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTG 224
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 167
Query: 62 YVKLV 66
+K++
Sbjct: 168 ELKIL 172
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 76 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 126
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 127 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 187 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 215
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTG 239
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Query: 62 YVKLV 66
+K++
Sbjct: 183 ELKIL 187
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 55 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 105
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 106 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 165
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 166 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 194
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTG 218
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 103 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 161
Query: 62 YVKLV 66
+K++
Sbjct: 162 ELKIL 166
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 147
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + GT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 148 FGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 31/124 (25%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
+ F A +I LE++H R +V+RDLKP N+LLD G+V+
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR--------------------- 332
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHE 243
IS + D FSK H+ GT Y+APE++ K +D + D+++LG ++ +
Sbjct: 333 -ISDLGLACD--FSKKKPHAS------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 244 LLTG 247
LL G
Sbjct: 384 LLRG 387
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+L+ GG++ L + F + F A +I LE++H R +V+RDLKP N+LLD G
Sbjct: 270 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
Query: 62 YVKL 65
+V++
Sbjct: 330 HVRI 333
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 31/124 (25%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
+ F A +I LE++H R +V+RDLKP N+LLD G+V+
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR--------------------- 332
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHE 243
IS + D FSK H+ GT Y+APE++ K +D + D+++LG ++ +
Sbjct: 333 -ISDLGLACD--FSKKKPHAS------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 244 LLTG 247
LL G
Sbjct: 384 LLRG 387
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+L+ GG++ L + F + F A +I LE++H R +V+RDLKP N+LLD G
Sbjct: 270 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
Query: 62 YVKL 65
+V++
Sbjct: 330 HVRI 333
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 54 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 104
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 105 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 164
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 165 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 193
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTG 217
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 102 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 160
Query: 62 YVKLV 66
+K++
Sbjct: 161 ELKIL 165
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 52 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 102
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 103 HLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 163 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 191
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTG 215
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 100 LVTHLMGADLNNIVKCAKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 62 YVKLV 66
+K++
Sbjct: 159 ELKIL 163
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 52 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 102
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 103 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 163 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 191
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTG 215
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 62 YVKLV 66
+K++
Sbjct: 159 ELKIL 163
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 52 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 102
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 103 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 163 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 191
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTG 215
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
Query: 62 YVKLV 66
+K++
Sbjct: 159 ELKIL 163
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 42/176 (23%)
Query: 75 TRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIE 134
+ Y ++ Y+ LE C GGE++ D I +A F ++
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELF----------DRIEPDIGMPEPDAQRFFHQ-LMA 115
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YLH GI RD+KPENLLLD R +K+ D
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKIS----------------------------D 147
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRG-HDRAVDYWALGILMHELLTG 247
FG + ++ + GT YVAPE++K R H VD W+ GI++ +L G
Sbjct: 148 FGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ LE C GGE++ + + A ++ + YLH GI RD+KPENLLLD R
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 61 GYVKL 65
+K+
Sbjct: 141 DNLKI 145
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 53 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 103
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 104 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 164 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 192
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTG 216
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 159
Query: 62 YVKLV 66
+K++
Sbjct: 160 ELKIL 164
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 31/124 (25%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
+ F A +I LE++H R +V+RDLKP N+LLD G+V+
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR--------------------- 332
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHE 243
IS + D FSK H+ GT Y+APE++ K +D + D+++LG ++ +
Sbjct: 333 -ISDLGLACD--FSKKKPHAS------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 244 LLTG 247
LL G
Sbjct: 384 LLRG 387
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+L+ GG++ L + F + F A +I LE++H R +V+RDLKP N+LLD G
Sbjct: 270 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
Query: 62 YVKL 65
+V++
Sbjct: 330 HVRI 333
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 31/124 (25%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
+ F A +I LE++H R +V+RDLKP N+LLD G+V+
Sbjct: 293 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR--------------------- 331
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHE 243
IS + D FSK H+ GT Y+APE++ K +D + D+++LG ++ +
Sbjct: 332 -ISDLGLACD--FSKKKPHAS------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 382
Query: 244 LLTG 247
LL G
Sbjct: 383 LLRG 386
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+L+ GG++ L + F + F A +I LE++H R +V+RDLKP N+LLD G
Sbjct: 269 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 328
Query: 62 YVKL 65
+V++
Sbjct: 329 HVRI 332
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 53 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 103
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 104 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 164 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 192
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTG 216
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 159
Query: 62 YVKLV 66
+K++
Sbjct: 160 ELKIL 164
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 43/201 (21%)
Query: 49 DLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTC 108
D K E L D + +++ +L F +++L+E C GG V ++ E
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--- 127
Query: 109 FDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYP 168
+T I+ + ++AL YLH I+ RDLK N+L G +KL
Sbjct: 128 ----LERPLTESQIQV---VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKL---- 176
Query: 169 AGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII----- 223
DFG S + +F GTP ++APE++
Sbjct: 177 ------------------------ADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 224 KNRGHDRAVDYWALGILMHEL 244
K+R +D D W+LGI + E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 1 MLLEACLGGEVWTILRE-RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
+L+E C GG V ++ E ++ + ++AL YLH I+ RDLK N+L
Sbjct: 111 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL 170
Query: 60 RGYVKLVS---RKKKTRQTRLYKTFKDSKY 86
G +KL K TR + +F + Y
Sbjct: 171 DGDIKLADFGVSAKNTRXIQRRDSFIGTPY 200
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 61/207 (29%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYML-----------------LEACLGGEVWT 101
+R + ++ K+ R+ RL K K + +L + +G ++
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 115
Query: 102 ILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGY 161
I++ + DD+ + F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 116 IVKSQKLTDDH------------VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSE 163
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPE 221
+K+ +DFG +H + + + T Y APE
Sbjct: 164 LKI----------------------------LDFGLCRH---TDDEMTGYVATRWYRAPE 192
Query: 222 IIKNRGH-DRAVDYWALGILMHELLTG 247
I+ N H ++ VD W++G +M ELLTG
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKSQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 51/202 (25%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD------- 111
+R + ++ K+ R+ RL K K + +L +V+T R F+D
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFNDVYLVTHL 108
Query: 112 -----NAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEF 166
N + + F+ ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 109 MGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI-- 166
Query: 167 YPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNR 226
+DFG ++H + + + T Y APEI+ N
Sbjct: 167 --------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIMLNW 197
Query: 227 GH-DRAVDYWALGILMHELLTG 247
H ++ VD W++G +M ELLTG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTG 219
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 34/184 (18%)
Query: 68 RKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRE---RTCFDDNAASFITACVIEA 124
+K R+ +L K + V LLE C + W ++ E T DD F +
Sbjct: 68 KKIAMREIKLLKQLRHENLVN-LLEVCKKKKRWYLVFEFVDHTILDD-LELFPNGLDYQV 125
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
+ +I + + H+ I+ RD+KPEN+L+ G VKL
Sbjct: 126 VQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKL-------------------- 165
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEI-IKNRGHDRAVDYWALGILMHE 243
DFGF++ L G T Y APE+ + + + +AVD WA+G L+ E
Sbjct: 166 --------CDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTE 217
Query: 244 LLTG 247
+ G
Sbjct: 218 MFMG 221
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 2 LLEACLGGEVWTILRE---RTCFDD-----NAASFITAC-----VIEALEYLHTRGIVFR 48
LLE C + W ++ E T DD N + +I + + H+ I+ R
Sbjct: 89 LLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHR 148
Query: 49 DLKPENLLLDNRGYVKL 65
D+KPEN+L+ G VKL
Sbjct: 149 DIKPENILVSQSGVVKL 165
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 49 DLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTC 108
D K E L D + +++ +L F +++L+E C GG V ++ E
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--- 127
Query: 109 FDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYP 168
+T I+ + ++AL YLH I+ RDLK N+L G +KL
Sbjct: 128 ----LERPLTESQIQV---VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKL---- 176
Query: 169 AGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII----- 223
DFG S + F GTP ++APE++
Sbjct: 177 ------------------------ADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 224 KNRGHDRAVDYWALGILMHEL 244
K+R +D D W+LGI + E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 1 MLLEACLGGEVWTILRE-RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
+L+E C GG V ++ E ++ + ++AL YLH I+ RDLK N+L
Sbjct: 111 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL 170
Query: 60 RGYVKLVSRKKKTRQTR 76
G +KL + TR
Sbjct: 171 DGDIKLADFGVSAKNTR 187
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 76 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 126
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 127 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + T Y APEI+
Sbjct: 187 ----------------------------LDFGLARH---TDDEMXGXVATRWYRAPEIML 215
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTG 239
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
Query: 62 YVKLV 66
+K++
Sbjct: 183 ELKIL 187
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+D+G ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDYGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
++ + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 68 SKPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 118
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 119 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + + T Y APEI+
Sbjct: 179 ----------------------------LDFGLARH---TDDEMTGYVATRWYRAPEIML 207
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTG 231
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
Query: 62 YVKLV 66
+K++
Sbjct: 175 ELKIL 179
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 24/135 (17%)
Query: 122 IEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIR---EGA 178
IE + +++AL YL + DLKPEN+LLD+ ++ +R +G
Sbjct: 136 IEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD------PYFEKSLITVRRVTDGK 189
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTW------TFCGTPEYVAPEIIKNRGHDRAV 232
K + S G +DFG C T+ + T +Y APE+I N G D +
Sbjct: 190 KIQIYRTKSTGIKLIDFG---------CATFKSDYHGSIINTRQYRAPEVILNLGWDVSS 240
Query: 233 DYWALGILMHELLTG 247
D W+ G ++ EL TG
Sbjct: 241 DMWSFGCVLAELYTG 255
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVK---LVSRKKKTRQTRLYKT 80
+++AL YL + DLKPEN+LLD+ + K V R ++ ++Y+T
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRT 196
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DFG ++H + + T Y APEI+
Sbjct: 167 ----------------------------LDFGLARH---TDDEMTGXVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 19/129 (14%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++EAL Y+H++GI+ R+LKP N+ +D VK+ + + R S +
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHR-----------SLDIL 173
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILMHELL----T 246
K+D S++L S + GT YVA E++ GH + +D ++LGI+ E + T
Sbjct: 174 KLD---SQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFST 230
Query: 247 GMKESNVFQ 255
G + N+ +
Sbjct: 231 GXERVNILK 239
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++EAL Y+H++GI+ R+LKP N+ +D VK+
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFIDESRNVKI 157
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 30/125 (24%)
Query: 124 ALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSF 183
A++F T +++ +++ H IV RD+KP+N+L+D+ +K+
Sbjct: 113 AINF-TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKI------------------- 152
Query: 184 FIISGGQVKVDFGFSKHLGHSG-CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
DFG +K L + +T GT +Y +PE K D D +++GI+++
Sbjct: 153 ---------FDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLY 203
Query: 243 ELLTG 247
E+L G
Sbjct: 204 EMLVG 208
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
D A +F T +++ +++ H IV RD+KP+N+L+D+ +K+
Sbjct: 111 DTAINF-TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKI 152
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 30/118 (25%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F+ C ALE++H+R ++ RD+KP N+ + G VKL
Sbjct: 142 FVQLC--SALEHMHSRRVMHRDIKPANVFITATGVVKLG--------------------- 178
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
D G + + GTP Y++PE I G++ D W+LG L++E+
Sbjct: 179 -------DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 28 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
F+ C ALE++H+R ++ RD+KP N+ + G VKL
Sbjct: 142 FVQLC--SALEHMHSRRVMHRDIKPANVFITATGVVKL 177
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 31/123 (25%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
+ A +AL + H GI+ RD+KP N+L+ VK+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILISATNAVKV----------------------- 157
Query: 188 GGQVKVDFGFSKHLGHSG---CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
VDFG ++ + SG +T GT +Y++PE + D D ++LG +++E+
Sbjct: 158 -----VDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 245 LTG 247
LTG
Sbjct: 213 LTG 215
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ A +AL + H GI+ RD+KP N+L+ VK+V
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILISATNAVKVV 158
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 57/130 (43%), Gaps = 34/130 (26%)
Query: 123 EALDFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
E L IT ++AL +L I+ RD+KP N+LLD G +KL
Sbjct: 125 EILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKL----------------- 167
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII----KNRGHDRAVDYWAL 237
DFG S L S KT G Y+APE I +G+D D W+L
Sbjct: 168 -----------CDFGISGQLVDSIAKTRD-AGCRPYMAPERIDPSASRQGYDVRSDVWSL 215
Query: 238 GILMHELLTG 247
GI ++EL TG
Sbjct: 216 GITLYELATG 225
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 29 ITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKL 65
IT ++AL +L I+ RD+KP N+LLD G +KL
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKL 167
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 41/164 (25%)
Query: 86 YVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIV 145
++ +++E GGE++ ER C NA F + F +I + Y H +
Sbjct: 89 HLAIVMEYASGGELF----ERIC---NAGRFSE----DEARFFFQQLISGVSYAHAMQVA 137
Query: 146 FRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK-HLGHS 204
RDLK EN LLD +L+ DFG+SK + HS
Sbjct: 138 HRDLKLENTLLDGSPAPRLKI--------------------------ADFGYSKASVLHS 171
Query: 205 GCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
K+ GTP Y+APE++ + +D + D W+ G+ ++ +L G
Sbjct: 172 QPKSA--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 1 MLLEACLGGEVWTILRERTC----FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
+++E GGE++ ER C F ++ A F +I + Y H + RDLK EN L
Sbjct: 92 IVMEYASGGELF----ERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTL 147
Query: 57 LDNRGYVKL 65
LD +L
Sbjct: 148 LDGSPAPRL 156
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 29/125 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G++M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMG 216
Query: 243 ELLTG 247
E++ G
Sbjct: 217 EMIKG 221
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 29/125 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G++M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMG 216
Query: 243 ELLTG 247
E++ G
Sbjct: 217 EMIKG 221
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 44/202 (21%)
Query: 49 DLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTC 108
D K E L D + +++ +L F +++L+E C GG V ++ E
Sbjct: 44 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--- 100
Query: 109 FDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYP 168
+T I+ + ++AL YLH I+ RDLK N+L G +KL
Sbjct: 101 ----LERPLTESQIQV---VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKL---- 149
Query: 169 AGHYIIREGAKGDSFFIISGGQVKVDFGFS-KHLGHSGCKTWTFCGTPEYVAPEII---- 223
DFG S K+ + +F GTP ++APE++
Sbjct: 150 ------------------------ADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 224 -KNRGHDRAVDYWALGILMHEL 244
K+R +D D W+LGI + E+
Sbjct: 186 SKDRPYDYKADVWSLGITLIEM 207
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 1 MLLEACLGGEVWTILRE-RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
+L+E C GG V ++ E ++ + ++AL YLH I+ RDLK N+L
Sbjct: 84 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL 143
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDS 84
G +KL + TR +DS
Sbjct: 144 DGDIKLADFGVSAKNTRTXIQRRDS 168
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK- 165
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
I+ GG + H+ + + T Y APEI+
Sbjct: 166 --------------------ILDGGLAR----------HTDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 36/129 (27%)
Query: 123 EALDFITAC-----VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG 177
E LD + A + + ++Y+H++ ++ RDLKP N+
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNI----------------------- 167
Query: 178 AKGDSFFIISGGQVKV-DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWA 236
F++ QVK+ DFG L + G +T + GT Y++PE I ++ + + VD +A
Sbjct: 168 ------FLVDTKQVKIGDFGLVTSLKNDGKRTRS-KGTLRYMSPEQISSQDYGKEVDLYA 220
Query: 237 LGILMHELL 245
LG+++ ELL
Sbjct: 221 LGLILAELL 229
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 3 LEACLGG--EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+E C G E W R D A + + + ++Y+H++ ++ RDLKP N+ L +
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDT 172
Query: 61 GYVKL 65
VK+
Sbjct: 173 KQVKI 177
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 43/163 (26%)
Query: 83 DSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
+ ++YM+ E G V + + +D A F +I+ +EYLH +
Sbjct: 109 NEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR------------FYFQDLIKGIEYLHYQ 156
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I+ RD+KP NLL+ G++K+ DFG S
Sbjct: 157 KIIHRDIKPSNLLVGEDGHIKI----------------------------ADFGVSNEFK 188
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGH---DRAVDYWALGILMH 242
S GTP ++APE + +A+D WA+G+ ++
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M+ E G V + + +D A F +I+ +EYLH + I+ RD+KP NLL+
Sbjct: 115 MVFELVNQGPVMEVPTLKPLSEDQA-RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGED 173
Query: 61 GYVKL 65
G++K+
Sbjct: 174 GHIKI 178
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 25/125 (20%)
Query: 125 LDFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSF 183
L +T +++AL YL + G++ RD+KP N+LLD RG +KL + ++ + AK S
Sbjct: 126 LGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS- 184
Query: 184 FIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHE 243
+GC + PE + P +D D W+LGI + E
Sbjct: 185 --------------------AGCAAYM---APERIDPPDPTKPDYDIRADVWSLGISLVE 221
Query: 244 LLTGM 248
L TG
Sbjct: 222 LATGQ 226
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 29 ITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKL 65
+T +++AL YL + G++ RD+KP N+LLD RG +KL
Sbjct: 129 MTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL 166
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+ FG ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LGFGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+D G ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDAGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 31/123 (25%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
+ A +AL + H GI+ RD+KP N+++ VK+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKV----------------------- 157
Query: 188 GGQVKVDFGFSKHLGHSG---CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+DFG ++ + SG +T GT +Y++PE + D D ++LG +++E+
Sbjct: 158 -----MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 245 LTG 247
LTG
Sbjct: 213 LTG 215
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ A +AL + H GI+ RD+KP N+++ VK++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM 158
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 39/190 (20%)
Query: 60 RGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITA 119
+ + ++++ + L+ F+D + ++LE GGE+ FD AA
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL---------FDRIAAEDYKM 146
Query: 120 CVIEALDFI-TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGA 178
E ++++ AC E L+++H IV D+KPEN++ + +
Sbjct: 147 SEAEVINYMRQAC--EGLKHMHEHSIVHLDIKPENIMCETK------------------- 185
Query: 179 KGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG 238
K S II DFG + L T T E+ APEI+ D WA+G
Sbjct: 186 KASSVKII-------DFGLATKLNPDEIVKVT-TATAEFAAPEIVDREPVGFYTDMWAIG 237
Query: 239 ILMHELLTGM 248
+L + LL+G+
Sbjct: 238 VLGYVLLSGL 247
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 13/67 (19%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAAS-------FITACVIEALEYLHTRGIVFRDLKPE 53
++LE GGE++ +R +D S AC E L+++H IV D+KPE
Sbjct: 125 LILEFLSGGELF----DRIAAEDYKMSEAEVINYMRQAC--EGLKHMHEHSIVHLDIKPE 178
Query: 54 NLLLDNR 60
N++ + +
Sbjct: 179 NIMCETK 185
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 31/123 (25%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
+ A +AL + H GI+ RD+KP N+++ VK+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKV----------------------- 157
Query: 188 GGQVKVDFGFSKHLGHSG---CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+DFG ++ + SG +T GT +Y++PE + D D ++LG +++E+
Sbjct: 158 -----MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 245 LTG 247
LTG
Sbjct: 213 LTG 215
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ A +AL + H GI+ RD+KP N+++ VK++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM 158
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 31/123 (25%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
+ A +AL + H GI+ RD+KP N+++ VK+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKV----------------------- 157
Query: 188 GGQVKVDFGFSKHLGHSG---CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+DFG ++ + SG +T GT +Y++PE + D D ++LG +++E+
Sbjct: 158 -----MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 245 LTG 247
LTG
Sbjct: 213 LTG 215
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ A +AL + H GI+ RD+KP N+++ VK++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM 158
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 31/123 (25%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
+ A +AL + H GI+ RD+KP N+++ VK+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKV----------------------- 157
Query: 188 GGQVKVDFGFSKHLGHSG---CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+DFG ++ + SG +T GT +Y++PE + D D ++LG +++E+
Sbjct: 158 -----MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 245 LTG 247
LTG
Sbjct: 213 LTG 215
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ A +AL + H GI+ RD+KP N+++ VK++
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM 158
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+D G ++H + + + T Y APEI+
Sbjct: 167 ----------------------------LDRGLARH---TDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLVSR 68
+K++ R
Sbjct: 163 ELKILDR 169
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 26/118 (22%)
Query: 128 ITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
I +++ALE+LH++ ++ RD+KP N+L++ G VK+ + Y++ + AK
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD------ 167
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+D +GCK + PE + PE + +G+ D W+LGI M EL
Sbjct: 168 ------ID---------AGCKPYM---APERINPE-LNQKGYSVKSDIWSLGITMIEL 206
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 29 ITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKL 65
I +++ALE+LH++ ++ RD+KP N+L++ G VK+
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKM 151
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 31/123 (25%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
+ A +AL + H GI+ RD+KP N+++ VK+
Sbjct: 138 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKV----------------------- 174
Query: 188 GGQVKVDFGFSKHLGHSG---CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+DFG ++ + SG +T GT +Y++PE + D D ++LG +++E+
Sbjct: 175 -----MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 229
Query: 245 LTG 247
LTG
Sbjct: 230 LTG 232
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ A +AL + H GI+ RD+KP N+++ VK++
Sbjct: 138 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM 175
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 55/204 (26%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + ++ K+ R+ RL K K + +L +V+T R F+D +T
Sbjct: 56 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-------DVFTPARSLEEFND--VYLVT 106
Query: 119 ACVIEALDFITAC--------------VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+ L+ I C ++ L+Y+H+ I+ RDLKP NL ++ +K+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK 224
+DF ++ H+ + + T Y APEI+
Sbjct: 167 ----------------------------LDFYLAR---HTDDEMTGYVATRWYRAPEIML 195
Query: 225 NRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELLTG
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
Query: 62 YVKLV 66
+K++
Sbjct: 163 ELKIL 167
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 61/207 (29%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYML-----------------LEACLGGEVWT 101
+R + ++ K+ R+ RL K K + +L + +G ++
Sbjct: 85 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNN 144
Query: 102 ILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGY 161
I++ + DD+ + F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 145 IVKCQKLTDDH------------VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 192
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPE 221
+K+ +DFG ++H + + + T Y APE
Sbjct: 193 LKI----------------------------LDFGLARH---TDDEMTGYVATRWYRAPE 221
Query: 222 IIKNRGH-DRAVDYWALGILMHELLTG 247
I+ N H + VD W++G +M ELLTG
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTG 248
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + DD+ F+ ++ L+Y+H+ I+ RDLKP NL ++
Sbjct: 133 LVTHLMGADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 191
Query: 62 YVKLV 66
+K++
Sbjct: 192 ELKIL 196
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 33/130 (25%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + +I ++ L +LH ++ RD+K +N+LL VKL
Sbjct: 129 EWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKL------------------ 170
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-----KNRGHDRAVDYWAL 237
VDFG S L + + TF GTP ++APE+I + +D D W+L
Sbjct: 171 ----------VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSL 220
Query: 238 GILMHELLTG 247
GI E+ G
Sbjct: 221 GITAIEMAEG 230
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E C G V +++ + ++I ++ L +LH ++ RD+K +N+LL
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT 163
Query: 59 NRGYVKLV 66
VKLV
Sbjct: 164 ENAEVKLV 171
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 41/164 (25%)
Query: 86 YVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIV 145
++ +++E GGE++ ER C NA F + F ++ + Y H+ I
Sbjct: 90 HLAIIMEYASGGELY----ERIC---NAGRFSE----DEARFFFQQLLSGVSYCHSMQIC 138
Query: 146 FRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH-LGHS 204
RDLK EN LLD +L+ DFG+SK + HS
Sbjct: 139 HRDLKLENTLLDGSPAPRLKI--------------------------CDFGYSKSSVLHS 172
Query: 205 GCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
K+ GTP Y+APE++ + +D + D W+ G+ ++ +L G
Sbjct: 173 QPKSTV--GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 1 MLLEACLGGEVWTILRERTC----FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
+++E GGE++ ER C F ++ A F ++ + Y H+ I RDLK EN L
Sbjct: 93 IIMEYASGGELY----ERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTL 148
Query: 57 LDNRGYVKL 65
LD +L
Sbjct: 149 LDGSPAPRL 157
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 63/208 (30%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFK------------------DSKYVYMLLEACLGGEVW 100
+R + L+ ++ R+ RL K K D VY L+ +G ++
Sbjct: 62 SRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVY-LVTTLMGADLN 120
Query: 101 TILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 160
I++ + D E + F+ ++ L+Y+H+ GI+ RDLKP N+ ++
Sbjct: 121 NIVKSQALSD------------EHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS 168
Query: 161 YVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAP 220
+++ +DFG ++ + + + T Y AP
Sbjct: 169 ELRI----------------------------LDFGLARQ---ADEEMTGYVATRWYRAP 197
Query: 221 EIIKNRGH-DRAVDYWALGILMHELLTG 247
EI+ N H ++ VD W++G +M ELL G
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + D++ F+ ++ L+Y+H+ GI+ RDLKP N+ ++
Sbjct: 110 LVTTLMGADLNNIVKSQALSDEHV-QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS 168
Query: 62 YVKLV 66
++++
Sbjct: 169 ELRIL 173
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 44/169 (26%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
+ D K +++++E C GG V I+ E + + ++EAL +LH
Sbjct: 86 YHDGK-LWIMIEFCPGGAVDAIMLE----------LDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ I+ RDLK N+L+ G ++L DFG S
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRL----------------------------ADFGVSAK 166
Query: 201 LGHSGCKTWTFCGTPEYVAPEII-----KNRGHDRAVDYWALGILMHEL 244
+ K +F GTP ++APE++ K+ +D D W+LGI + E+
Sbjct: 167 NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 1 MLLEACLGGEVWTILRE-RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GG V I+ E + + ++EAL +LH++ I+ RDLK N+L+
Sbjct: 93 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL 152
Query: 60 RGYVKL----VSRKK-KTRQTR---------------LYKTFKDSKYVY 88
G ++L VS K KT Q R + +T KD+ Y Y
Sbjct: 153 EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 201
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 26/118 (22%)
Query: 128 ITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
I +++ALE+LH++ ++ RD+KP N+L++ G VK+ + Y++ AK
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK------- 210
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+D +GCK + PE + PE + +G+ D W+LGI M EL
Sbjct: 211 -----TID---------AGCKPYM---APERINPE-LNQKGYSVKSDIWSLGITMIEL 250
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 29 ITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKL 65
I +++ALE+LH++ ++ RD+KP N+L++ G VK+
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKM 195
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 44/169 (26%)
Query: 81 FKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLH 140
+ D K +++++E C GG V I+ E + + ++EAL +LH
Sbjct: 78 YHDGK-LWIMIEFCPGGAVDAIMLE----------LDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
++ I+ RDLK N+L+ G ++L DFG S
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRL----------------------------ADFGVSAK 158
Query: 201 LGHSGCKTWTFCGTPEYVAPEII-----KNRGHDRAVDYWALGILMHEL 244
+ K +F GTP ++APE++ K+ +D D W+LGI + E+
Sbjct: 159 NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 1 MLLEACLGGEVWTILRE-RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GG V I+ E + + ++EAL +LH++ I+ RDLK N+L+
Sbjct: 85 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL 144
Query: 60 RGYVKL----VSRKK-KTRQTR---------------LYKTFKDSKYVY 88
G ++L VS K KT Q R + +T KD+ Y Y
Sbjct: 145 EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 193
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 41/164 (25%)
Query: 86 YVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIV 145
++ +++E GGE++ ER C NA F + F +I + Y H +
Sbjct: 88 HLAIVMEYASGGELF----ERIC---NAGRFSE----DEARFFFQQLISGVSYCHAMQVC 136
Query: 146 FRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH-LGHS 204
RDLK EN LLD +L+ DFG+SK + HS
Sbjct: 137 HRDLKLENTLLDGSPAPRLKI--------------------------CDFGYSKSSVLHS 170
Query: 205 GCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
K+ GTP Y+APE++ + +D + D W+ G+ ++ +L G
Sbjct: 171 QPKSTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 1 MLLEACLGGEVWTILRERTC----FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
+++E GGE++ ER C F ++ A F +I + Y H + RDLK EN L
Sbjct: 91 IVMEYASGGELF----ERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTL 146
Query: 57 LDNRGYVKL 65
LD +L
Sbjct: 147 LDGSPAPRL 155
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 56/130 (43%), Gaps = 32/130 (24%)
Query: 117 ITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIRE 176
+T I+A +T ++ LEYLH I+ RDLKP NLLLD G +KL
Sbjct: 109 LTPSHIKAYMLMT---LQGLEYLHQHWILHRDLKPNNLLLDENGVLKL------------ 153
Query: 177 GAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYW 235
DFG +K G T Y APE++ R + VD W
Sbjct: 154 ----------------ADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMW 197
Query: 236 ALGILMHELL 245
A+G ++ ELL
Sbjct: 198 AVGCILAELL 207
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
++ LEYLH I+ RDLKP NLLLD G +KL
Sbjct: 121 TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLA 154
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 32/126 (25%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ +++ L+Y+H+ G+V RDLKP NL ++ +K+
Sbjct: 126 EKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILM 241
+DFG ++ H+ + + T Y APE+I + H ++ VD W++G +M
Sbjct: 168 ----------LDFGLAR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 214
Query: 242 HELLTG 247
E+LTG
Sbjct: 215 AEMLTG 220
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
F + ++ +++ L+Y+H+ G+V RDLKP NL ++ +K++
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKIL 168
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 41/164 (25%)
Query: 86 YVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIV 145
++ +++E GGE++ ER C NA F + F +I + Y H +
Sbjct: 89 HLAIVMEYASGGELF----ERIC---NAGRFSE----DEARFFFQQLISGVSYCHAMQVC 137
Query: 146 FRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH-LGHS 204
RDLK EN LLD +L+ DFG+SK + HS
Sbjct: 138 HRDLKLENTLLDGSPAPRLKI--------------------------CDFGYSKSSVLHS 171
Query: 205 GCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
K+ GTP Y+APE++ + +D + D W+ G+ ++ +L G
Sbjct: 172 QPKSTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 1 MLLEACLGGEVWTILRERTC----FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
+++E GGE++ ER C F ++ A F +I + Y H + RDLK EN L
Sbjct: 92 IVMEYASGGELF----ERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTL 147
Query: 57 LDNRGYVKL 65
LD +L
Sbjct: 148 LDGSPAPRL 156
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 32/126 (25%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ +++ L+Y+H+ G+V RDLKP NL ++ +K+
Sbjct: 144 EKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKI------------------ 185
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGH-DRAVDYWALGILM 241
+DFG ++ H+ + + T Y APE+I + H ++ VD W++G +M
Sbjct: 186 ----------LDFGLAR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 232
Query: 242 HELLTG 247
E+LTG
Sbjct: 233 AEMLTG 238
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
F + ++ +++ L+Y+H+ G+V RDLKP NL ++ +K++
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKIL 186
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELLTG 247
E++ G
Sbjct: 217 EMIKG 221
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 57/205 (27%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + L+ ++ R+ RL K K + +L + T +D + ++
Sbjct: 62 SRPFQSLIHARRTYRELRLLKHLKHENVIGLL----------DVFTPATSIEDFSEVYLV 111
Query: 119 ACVI---------------EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVK 163
++ E + F+ ++ L+Y+H+ GI+ RDLKP N+ ++ ++
Sbjct: 112 TTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELR 171
Query: 164 LEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII 223
+ +DFG ++ + + + T Y APEI+
Sbjct: 172 I----------------------------LDFGLARQ---ADEEMTGYVATRWYRAPEIM 200
Query: 224 KNRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELL G
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQG 225
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ I++ + D++ F+ ++ L+Y+H+ GI+ RDLKP N+ ++
Sbjct: 110 LVTTLMGADLNNIVKCQALSDEHV-QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS 168
Query: 62 YVKLV 66
++++
Sbjct: 169 ELRIL 173
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 36/129 (27%)
Query: 123 EALDFITAC-----VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG 177
E LD + A + + ++Y+H++ ++ RDLKP N+
Sbjct: 117 EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNI----------------------- 153
Query: 178 AKGDSFFIISGGQVKV-DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWA 236
F++ QVK+ DFG L + G + + GT Y++PE I ++ + + VD +A
Sbjct: 154 ------FLVDTKQVKIGDFGLVTSLKNDGKRXRS-KGTLRYMSPEQISSQDYGKEVDLYA 206
Query: 237 LGILMHELL 245
LG+++ ELL
Sbjct: 207 LGLILAELL 215
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 3 LEACLGG--EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+E C G E W R D A + + + ++Y+H++ ++ RDLKP N+ L +
Sbjct: 99 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT 158
Query: 61 GYVKL 65
VK+
Sbjct: 159 KQVKI 163
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELLTG 247
E++ G
Sbjct: 217 EMIKG 221
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELLTG 247
E++ G
Sbjct: 217 EMIKG 221
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 36/159 (22%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHT-RGIV 145
VY++ E + D N FI VI+ I V+ + Y+H + I
Sbjct: 118 VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKC---IIKSVLNSFSYIHNEKNIC 174
Query: 146 FRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSG 205
RD+KP N+L+D G VKL + Y++ + KG
Sbjct: 175 HRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR----------------------- 211
Query: 206 CKTWTFCGTPEYVAPEIIKNRG--HDRAVDYWALGILMH 242
GT E++ PE N + VD W+LGI ++
Sbjct: 212 -------GTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 29 ITACVIEALEYLHT-RGIVFRDLKPENLLLDNRGYVKL 65
I V+ + Y+H + I RD+KP N+L+D G VKL
Sbjct: 156 IIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKL 193
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 42/171 (24%)
Query: 78 YKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALE 137
Y F + + +E GG + +L+E + E L ++ V+ L
Sbjct: 80 YGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE-----------EILGKVSIAVLRGLA 128
Query: 138 YLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
YL + I+ RD+KP N+L+++RG +KL DFG
Sbjct: 129 YLREKHQIMHRDVKPSNILVNSRGEIKL----------------------------CDFG 160
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
S L S + F GT Y+APE ++ + D W++G+ + EL G
Sbjct: 161 VSGQLIDSMANS--FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRG 61
+E GG + +L+E + ++ V+ L YL + I+ RD+KP N+L+++RG
Sbjct: 93 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG 152
Query: 62 YVKL 65
+KL
Sbjct: 153 EIKL 156
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 43/181 (23%)
Query: 72 TRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITAC 131
R LY ++ +V + +E GG + +++E+ C ++ A + +E L
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGL------ 198
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
EYLH+R I+ D+K +N+LL + G H +
Sbjct: 199 -----EYLHSRRILHGDVKADNVLLSSDG---------SHAAL----------------- 227
Query: 192 KVDFGFS-----KHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG + LG S GT ++APE++ R D VD W+ +M +L
Sbjct: 228 -CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 286
Query: 247 G 247
G
Sbjct: 287 G 287
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ +E GG + +++E+ C ++ A + +E LEYLH+R I+ D+K +N+LL +
Sbjct: 162 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 221
Query: 61 G 61
G
Sbjct: 222 G 222
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRG--IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGG 189
V + + YLH R IV R+LK NLL+D + VK+
Sbjct: 146 VAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV------------------------- 180
Query: 190 QVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG S+ + + + GTPE++APE++++ + D ++ G+++ EL T
Sbjct: 181 ---CDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 37/172 (21%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
L+ F+D + M+ E GGE++ E+ + N S EA++++ V + L
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELF----EKVADEHNKMS-----EDEAVEYMRQ-VCKGL 268
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
++H V DLKPEN++ + +L+ +DFG
Sbjct: 269 CHMHENNYVHLDLKPENIMFTTKRSNELKL--------------------------IDFG 302
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ HL T GT E+ APE+ + + D W++G+L + LL+G+
Sbjct: 303 LTAHLDPKQSVKVT-TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 353
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 1 MLLEACLGGEVW-TILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
M+ E GGE++ + E ++ A V + L ++H V DLKPEN++
Sbjct: 231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF 288
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRG--IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGG 189
V + + YLH R IV RDLK NLL+D + VK+
Sbjct: 146 VAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKV------------------------- 180
Query: 190 QVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG S+ + GTPE++APE++++ + D ++ G+++ EL T
Sbjct: 181 ---CDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 33 VIEALEYLHTRG--IVFRDLKPENLLLDNRGYVKL 65
V + + YLH R IV RDLK NLL+D + VK+
Sbjct: 146 VAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKV 180
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 37/172 (21%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
L+ F+D + M+ E GGE++ E+ + N S EA++++ V + L
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGELF----EKVADEHNKMS-----EDEAVEYMRQ-VCKGL 162
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
++H V DLKPEN++ + +L+ +DFG
Sbjct: 163 CHMHENNYVHLDLKPENIMFTTKRSNELKL--------------------------IDFG 196
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
+ HL T GT E+ APE+ + + D W++G+L + LL+G+
Sbjct: 197 LTAHLDPKQSVKVT-TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 247
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 1 MLLEACLGGEVW-TILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
M+ E GGE++ + E ++ A V + L ++H V DLKPEN++
Sbjct: 125 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF 182
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 39/130 (30%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPE-----YVAPEIIKNRGHDRAVDYWAL 237
+DFG ++ G S F TPE Y APE+I G+ VD W++
Sbjct: 168 ----------LDFGLARTAGTS------FMMTPEVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 238 GILMHELLTG 247
G +M E++ G
Sbjct: 212 GCIMGEMIKG 221
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 57/205 (27%)
Query: 59 NRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFIT 118
+R + L+ ++ R+ RL K K + +L + T +D + ++
Sbjct: 54 SRPFQSLIHARRTYRELRLLKHLKHENVIGLL----------DVFTPATSIEDFSEVYLV 103
Query: 119 ACVI---------------EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVK 163
++ E + F+ ++ L+Y+H+ GI+ RDLKP N+ ++ ++
Sbjct: 104 TTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELR 163
Query: 164 LEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII 223
+ +DFG ++ + + + T Y APEI+
Sbjct: 164 I----------------------------LDFGLARQ---ADEEMTGYVATRWYRAPEIM 192
Query: 224 KNRGH-DRAVDYWALGILMHELLTG 247
N H ++ VD W++G +M ELL G
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQG 217
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
L+ +G ++ I++ + D++ F+ ++ L+Y+H+ GI+ RDLKP N+ ++
Sbjct: 102 LVTTLMGADLNNIVKCQALSDEHV-QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN 157
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY L+ +G +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 114 TIEQMKDVY-LVTHLMGADLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 160
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXDLKI----------------------------CDFGLAR 192
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 193 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 123 LVTHLMGADLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 181
Query: 62 YVKL 65
+K+
Sbjct: 182 DLKI 185
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 35/177 (19%)
Query: 72 TRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITAC 131
R LY ++ +V + +E GG + +++E+ C ++ A + +E L
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGL------ 179
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRG-YVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
EYLH+R I+ D+K +N+LL + G + L + GH + + G +++G
Sbjct: 180 -----EYLHSRRILHGDVKADNVLLSSDGSHAALCDF--GHAVCLQ-PDGLGKDLLTGDY 231
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+ GT ++APE++ R D VD W+ +M +L G
Sbjct: 232 IP--------------------GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ +E GG + +++E+ C ++ A + +E LEYLH+R I+ D+K +N+LL +
Sbjct: 143 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 202
Query: 61 G 61
G
Sbjct: 203 G 203
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELLTG 247
E++ G
Sbjct: 217 EMIKG 221
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 53/217 (24%)
Query: 36 ALEYLHTRGIVFRD-LKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEAC 94
A + + TRG+ ++ +K E +++ + L+ +LY F+ + +++E
Sbjct: 118 AAKIIKTRGMKDKEEVKNEISVMNQLDHANLI---------QLYDAFESKNDIVLVMEYV 168
Query: 95 LGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENL 154
GGE+ FD ++ + F+ + E + ++H I+ DLKPEN+
Sbjct: 169 DGGEL---------FDRIIDESYNLTELDTILFMKQ-ICEGIRHMHQMYILHLDLKPENI 218
Query: 155 LLDNRGYVKL---EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF 211
L NR ++ +F A Y RE ++KV+FG
Sbjct: 219 LCVNRDAKQIKIIDFGLARRYKPRE-------------KLKVNFG--------------- 250
Query: 212 CGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
TPE++APE++ D W++G++ + LL+G+
Sbjct: 251 --TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL 285
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 1 MLLEACLGGEVWT-ILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
+++E GGE++ I+ E + + E + ++H I+ DLKPEN+L N
Sbjct: 163 LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN 222
Query: 60 RGYVKL------VSRKKKTRQ 74
R ++ ++R+ K R+
Sbjct: 223 RDAKQIKIIDFGLARRYKPRE 243
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELLTG 247
E++ G
Sbjct: 217 EMIKG 221
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 168
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 169 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 217
Query: 243 ELLTG 247
E++ G
Sbjct: 218 EMIKG 222
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 169
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 33/176 (18%)
Query: 72 TRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITAC 131
R LY ++ +V + +E GG + ++++ C ++ A + +E L
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGL------ 163
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
EYLHTR I+ D+K +N+LL + G + GH + + G +++G +
Sbjct: 164 -----EYLHTRRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQ-PDGLGKSLLTGDYI 216
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GT ++APE++ + D VD W+ +M +L G
Sbjct: 217 P--------------------GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ +E GG + ++++ C ++ A + +E LEYLHTR I+ D+K +N+LL +
Sbjct: 127 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD 186
Query: 61 G 61
G
Sbjct: 187 G 187
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 33/176 (18%)
Query: 72 TRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITAC 131
R LY ++ +V + +E GG + ++++ C ++ A + +E L
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGL------ 177
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
EYLHTR I+ D+K +N+LL + G + GH + + G +++G +
Sbjct: 178 -----EYLHTRRILHGDVKADNVLLSSDG-SRAALCDFGHALCLQ-PDGLGKSLLTGDYI 230
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GT ++APE++ + D VD W+ +M +L G
Sbjct: 231 P--------------------GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ +E GG + ++++ C ++ A + +E LEYLHTR I+ D+K +N+LL +
Sbjct: 141 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD 200
Query: 61 G 61
G
Sbjct: 201 G 201
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 29/125 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELLTG 247
E++ G
Sbjct: 217 EMIKG 221
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 36/163 (22%)
Query: 96 GGEVWTILRERTCFDDNAASFITA-CVIEALD-----FITACVIEALEYLHTRGIVFRDL 149
+V+ ++ + C +N ++ C IE + I + EA+E+LH++G++ RDL
Sbjct: 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDL 144
Query: 150 KPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD-------FGFSKHLG 202
KP N+ VK+ GD + + Q + + +++H G
Sbjct: 145 KPSNIFFTMDDVVKV---------------GDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
G K Y++PE I + VD ++LG+++ ELL
Sbjct: 190 QVGTKL--------YMSPEQIHGNSYSHKVDIFSLGLILFELL 224
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+ EA+E+LH++G++ RDLKP N+ VK+
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV 159
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 33/176 (18%)
Query: 72 TRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITAC 131
R LY ++ +V + +E GG + ++++ C ++ A + +E L
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGL------ 179
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
EYLHTR I+ D+K +N+LL + G + GH + + G +++G +
Sbjct: 180 -----EYLHTRRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQ-PDGLGKSLLTGDYI 232
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GT ++APE++ + D VD W+ +M +L G
Sbjct: 233 P--------------------GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ +E GG + ++++ C ++ A + +E LEYLHTR I+ D+K +N+LL +
Sbjct: 143 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD 202
Query: 61 G 61
G
Sbjct: 203 G 203
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELL 245
E++
Sbjct: 217 EMV 219
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKIL 168
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELL 245
E++
Sbjct: 217 EMV 219
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKIL 168
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 41/164 (25%)
Query: 86 YVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIV 145
++ +++E GGE++ ER C NA F + F +I + Y H +
Sbjct: 89 HLAIVMEYASGGELF----ERIC---NAGRFSE----DEARFFFQQLISGVSYCHAMQVC 137
Query: 146 FRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH-LGHS 204
RDLK EN LLD +L+ FG+SK + HS
Sbjct: 138 HRDLKLENTLLDGSPAPRLKI--------------------------CAFGYSKSSVLHS 171
Query: 205 GCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
K+ GTP Y+APE++ + +D + D W+ G+ ++ +L G
Sbjct: 172 QPKSTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 1 MLLEACLGGEVWTILRERTC----FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
+++E GGE++ ER C F ++ A F +I + Y H + RDLK EN L
Sbjct: 92 IVMEYASGGELF----ERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTL 147
Query: 57 LDNRGYVKL 65
LD +L
Sbjct: 148 LDGSPAPRL 156
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 119 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI------------------ 160
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 161 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 209
Query: 243 ELL 245
E++
Sbjct: 210 EMV 212
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 116 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKIL 161
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 29/125 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 128 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 169
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S F T Y APE+I G+ VD W++G +M
Sbjct: 170 ----------LDFGLARTAGTSFMMV-PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 218
Query: 243 ELLTG 247
E++ G
Sbjct: 219 EMIKG 223
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 125 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 170
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 26/118 (22%)
Query: 128 ITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
I +++ALE+LH++ ++ RD+KP N+L++ G VK + Y++ + AK
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD------ 194
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+D +GCK + PE + PE + +G+ D W+LGI EL
Sbjct: 195 ------ID---------AGCKPYX---APERINPE-LNQKGYSVKSDIWSLGITXIEL 233
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 29 ITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVK 64
I +++ALE+LH++ ++ RD+KP N+L++ G VK
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK 177
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 123 EALDFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
+ L ++ VI+ L YL + I+ RD+KP N+L+++RG +KL
Sbjct: 123 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL----------------- 165
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
DFG S L S + F GT Y++PE ++ + D W++G+ +
Sbjct: 166 -----------CDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 212
Query: 242 HELLTG 247
E+ G
Sbjct: 213 VEMAVG 218
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRG 61
+E GG + +L++ + ++ VI+ L YL + I+ RD+KP N+L+++RG
Sbjct: 102 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 161
Query: 62 YVKL 65
+KL
Sbjct: 162 EIKL 165
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLNRGELKL-------------------------- 152
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 153 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLI 153
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 86 YVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIV 145
Y+Y+ ++ C + + R +D I+ + EA+E+LH++G++
Sbjct: 135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQ--------IAEAVEFLHSKGLM 186
Query: 146 FRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD-------FGFS 198
RDLKP N+ VK+ GD + + Q + + ++
Sbjct: 187 HRDLKPSNIFFTMDDVVKV---------------GDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 199 KHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
H G G K Y++PE I + VD ++LG+++ ELL
Sbjct: 232 THXGQVGTKL--------YMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+ EA+E+LH++G++ RDLKP N+ VK+
Sbjct: 173 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV 205
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 37/172 (21%)
Query: 77 LYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEAL 136
L+++F+ + + M+ E G +++ + + F+ N ++ V EAL
Sbjct: 66 LHESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYV---------HQVCEAL 115
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
++LH+ I D++PEN++ R ++ G R+ GD+F ++
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQ--ARQLKPGDNFRLL---------- 163
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
PEY APE+ ++ A D W+LG L++ LL+G+
Sbjct: 164 ---------------FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI 200
Score = 30.4 bits (67), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 19 TCFDDNAASFITAC--VIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ F+ N ++ V EAL++LH+ I D++PEN++ R
Sbjct: 95 SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR 138
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 41/164 (25%)
Query: 86 YVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIV 145
++ +++E GGE++ ER C NA F + F +I + Y H +
Sbjct: 89 HLAIVMEYASGGELF----ERIC---NAGRFSE----DEARFFFQQLISGVSYCHAMQVC 137
Query: 146 FRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH-LGHS 204
RDLK EN LLD +L+ FG+SK + HS
Sbjct: 138 HRDLKLENTLLDGSPAPRLKI--------------------------CAFGYSKSSVLHS 171
Query: 205 GCKTWTFCGTPEYVAPEIIKNRGHD-RAVDYWALGILMHELLTG 247
K GTP Y+APE++ + +D + D W+ G+ ++ +L G
Sbjct: 172 QPKDTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 1 MLLEACLGGEVWTILRERTC----FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLL 56
+++E GGE++ ER C F ++ A F +I + Y H + RDLK EN L
Sbjct: 92 IVMEYASGGELF----ERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTL 147
Query: 57 LDNRGYVKL 65
LD +L
Sbjct: 148 LDGSPAPRL 156
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELL 245
E++
Sbjct: 217 EMV 219
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKIL 168
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 123 EALDFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
+ L ++ VI+ L YL + I+ RD+KP N+L+++RG +KL
Sbjct: 166 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL----------------- 208
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
DFG S L S + F GT Y++PE ++ + D W++G+ +
Sbjct: 209 -----------CDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 255
Query: 242 HELLTG 247
E+ G
Sbjct: 256 VEMAVG 261
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRG 61
+E GG + +L++ + ++ VI+ L YL + I+ RD+KP N+L+++RG
Sbjct: 145 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 204
Query: 62 YVKL 65
+KL
Sbjct: 205 EIKL 208
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELL 245
E++
Sbjct: 217 EMV 219
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKIL 168
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 123 EALDFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
+ L ++ VI+ L YL + I+ RD+KP N+L+++RG +KL
Sbjct: 131 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL----------------- 173
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
DFG S L S + F GT Y++PE ++ + D W++G+ +
Sbjct: 174 -----------CDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 220
Query: 242 HELLTG 247
E+ G
Sbjct: 221 VEMAVG 226
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRG 61
+E GG + +L++ + ++ VI+ L YL + I+ RD+KP N+L+++RG
Sbjct: 110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 169
Query: 62 YVKL 65
+KL
Sbjct: 170 EIKL 173
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 123 EALDFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
+ L ++ VI+ L YL + I+ RD+KP N+L+++RG +KL
Sbjct: 104 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL----------------- 146
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
DFG S L S + F GT Y++PE ++ + D W++G+ +
Sbjct: 147 -----------CDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 242 HELLTG 247
E+ G
Sbjct: 194 VEMAVG 199
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRG 61
+E GG + +L++ + ++ VI+ L YL + I+ RD+KP N+L+++RG
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
Query: 62 YVKL 65
+KL
Sbjct: 143 EIKL 146
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 123 EALDFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
+ L ++ VI+ L YL + I+ RD+KP N+L+++RG +KL
Sbjct: 104 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL----------------- 146
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
DFG S L S + F GT Y++PE ++ + D W++G+ +
Sbjct: 147 -----------CDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 242 HELLTG 247
E+ G
Sbjct: 194 VEMAVG 199
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRG 61
+E GG + +L++ + ++ VI+ L YL + I+ RD+KP N+L+++RG
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
Query: 62 YVKL 65
+KL
Sbjct: 143 EIKL 146
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 123 EALDFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
+ L ++ VI+ L YL + I+ RD+KP N+L+++RG +KL
Sbjct: 104 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL----------------- 146
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
DFG S L S + F GT Y++PE ++ + D W++G+ +
Sbjct: 147 -----------CDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 242 HELLTG 247
E+ G
Sbjct: 194 VEMAVG 199
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRG 61
+E GG + +L++ + ++ VI+ L YL + I+ RD+KP N+L+++RG
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
Query: 62 YVKL 65
+KL
Sbjct: 143 EIKL 146
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 123 EALDFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
+ L ++ VI+ L YL + I+ RD+KP N+L+++RG +KL
Sbjct: 104 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL----------------- 146
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
DFG S L S + F GT Y++PE ++ + D W++G+ +
Sbjct: 147 -----------CDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 242 HELLTG 247
E+ G
Sbjct: 194 VEMAVG 199
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRG 61
+E GG + +L++ + ++ VI+ L YL + I+ RD+KP N+L+++RG
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
Query: 62 YVKL 65
+KL
Sbjct: 143 EIKL 146
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 123 EALDFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
+ L ++ VI+ L YL + I+ RD+KP N+L+++RG +KL
Sbjct: 104 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL----------------- 146
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
DFG S L S + F GT Y++PE ++ + D W++G+ +
Sbjct: 147 -----------CDFGVSGQLIDSMANS--FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 242 HELLTG 247
E+ G
Sbjct: 194 VEMAVG 199
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRG 61
+E GG + +L++ + ++ VI+ L YL + I+ RD+KP N+L+++RG
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
Query: 62 YVKL 65
+KL
Sbjct: 143 EIKL 146
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 96 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 142
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 143 HSANVLHRDLKPSNLLLNTTSDLKI----------------------------CDFGLAR 174
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 175 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 105 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTS 163
Query: 62 YVKL 65
+K+
Sbjct: 164 DLKI 167
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 32/133 (24%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 124 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 165
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ + T + T Y APE+I G+ VD W++G +M
Sbjct: 166 ----------LDFGLARTASTNFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 214
Query: 243 ELLTGMKESNVFQ 255
EL+ G S +FQ
Sbjct: 215 ELVKG---SVIFQ 224
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL----VSRKKKTR--- 73
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K+ ++R T
Sbjct: 121 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMM 180
Query: 74 ----QTRLYKT--------FKDSKYVYMLLEACLGGEVW--TILRERTCFDDNAASFITA 119
TR Y+ +K++ ++ + C+ GE+ +++ + T D I
Sbjct: 181 TPYVVTRYYRAPEVILGMGYKENVDIWSV--GCIMGELVKGSVIFQGTDHIDQWNKVIEQ 238
Query: 120 CVIEALDFITACVIEALEYLHTR----GIVFRDLKPE 152
+ +F+ A Y+ R GI F +L P+
Sbjct: 239 LGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPD 275
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 42/185 (22%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGG-EVWTILRERTCFDDNAASFITACV 121
+ ++SR + ++ F++ + +++E G +++ + D+ AS+I +
Sbjct: 80 IAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 122 IEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
+ A+ YL + I+ RD+K EN+++ +KL
Sbjct: 140 VSAVG-----------YLRLKDIIHRDIKDENIVIAEDFTIKL----------------- 171
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGIL 240
+DFG + +L G +TFCGT EY APE++ N ++ W+LG+
Sbjct: 172 -----------IDFGSAAYL-ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVT 219
Query: 241 MHELL 245
++ L+
Sbjct: 220 LYTLV 224
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 8 GGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
G +++ + D+ AS+I ++ A+ YL + I+ RD+K EN+++ +KL+
Sbjct: 114 GLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLI 172
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 168
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 169 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 217
Query: 243 ELL 245
E++
Sbjct: 218 EMV 220
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 169
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 161
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 162 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMG 210
Query: 243 ELL 245
E++
Sbjct: 211 EMV 213
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 162
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 131 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 172
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 173 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMG 221
Query: 243 ELL 245
E++
Sbjct: 222 EMV 224
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 128 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 173
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 94 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 140
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKI----------------------------XDFGLAR 172
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 173 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 161
Query: 62 YVKL 65
+K+
Sbjct: 162 DLKI 165
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 168
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 169 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 217
Query: 243 ELL 245
E++
Sbjct: 218 EMV 220
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 169
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 205
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 206 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254
Query: 243 ELL 245
E++
Sbjct: 255 EMV 257
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 156
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 157 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 157
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELL 245
E++
Sbjct: 217 EMV 219
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 205
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 206 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254
Query: 243 ELL 245
E++
Sbjct: 255 EMV 257
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 199
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 200 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 200
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 125 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 166
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 167 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 215
Query: 243 ELL 245
E++
Sbjct: 216 EMV 218
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 122 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 167
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 168 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 243 ELL 245
E++
Sbjct: 217 EMV 219
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 157
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 158 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 158
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 34/119 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 185
Query: 191 VKVDFGFSKHLGHSGCKTWT-FCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + +T F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 186 --IDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 186
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 157
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 158 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 158
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 156
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 157 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 157
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 34/119 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 199
Query: 191 VKVDFGFSKHLGHSGCKTWT-FCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + +T F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 200 --IDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 200
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 161
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 162 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 210
Query: 243 ELL 245
E++
Sbjct: 211 EMV 213
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 162
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 34/119 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 185
Query: 191 VKVDFGFSKHLGHSGCKTWT-FCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + +T F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 186 --IDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 186
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 152
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 153 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 153
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 119 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 160
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 161 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 209
Query: 243 ELL 245
E++
Sbjct: 210 EMV 212
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 161
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 155
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 156 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 99 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 156
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 171
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 172 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 172
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 157
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 158 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 158
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 171
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 172 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 172
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 152
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 153 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 153
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 172
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 173 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 173
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 34/119 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 199
Query: 191 VKVDFGFSKHLGHSGCKTWT-FCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + +T F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 200 --IDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 200
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 184
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 185 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 185
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 34/119 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 184
Query: 191 VKVDFGFSKHLGHSGCKTWT-FCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + +T F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 185 --IDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 185
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 34/119 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 185
Query: 191 VKVDFGFSKHLGHSGCKTWT-FCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + +T F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 186 --IDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 186
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 184
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 185 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 185
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 172
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 173 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 173
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 185
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 186 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 186
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 184
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 185 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 185
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 172
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 173 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 173
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 161
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMH 242
+DFG ++ G S T + T Y APE+I G+ VD W++G +M
Sbjct: 162 ----------LDFGLARTAGTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 210
Query: 243 ELL 245
E++
Sbjct: 211 EMV 213
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 162
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 94 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 140
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKI----------------------------CDFGLAR 172
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 173 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 161
Query: 62 YVKL 65
+K+
Sbjct: 162 DLKI 165
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 94 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 140
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKI----------------------------CDFGLAR 172
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 173 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 161
Query: 62 YVKL 65
+K+
Sbjct: 162 DLKI 165
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 34/119 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 191
Query: 191 VKVDFGFSKHLGHSGCKTWT-FCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + +T F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 192 --IDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 192
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 34/143 (23%)
Query: 106 RTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLE 165
+T D +A + I +I++ F +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 88 KTFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL- 143
Query: 166 FYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEIIK 224
DFG ++ G +T+T T Y APEI+
Sbjct: 144 ---------------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILL 175
Query: 225 N-RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 98 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 144
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKI----------------------------CDFGLAR 176
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 177 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 165
Query: 62 YVKL 65
+K+
Sbjct: 166 DLKI 169
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 34/119 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 204
Query: 191 VKVDFGFSKHLGHSGCKTWT-FCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + +T F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 205 --IDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 205
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+EA+ + H G++ RD+K EN+L+D NRG +KL
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL-------------------------- 179
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
+DFG L + F GT Y PE I+ +R H R+ W+LGIL+++++ G
Sbjct: 180 --IDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 10 EVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
+++ + ER + A V+EA+ + H G++ RD+K EN+L+D NRG +KL+
Sbjct: 123 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 180
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 98 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 144
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKI----------------------------CDFGLAR 176
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 177 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLNTTX 165
Query: 62 YVKL 65
+K+
Sbjct: 166 DLKI 169
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 35/120 (29%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
+T ++ L YLH+ ++ RD+K N+LL G VKL
Sbjct: 159 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG---------------------- 196
Query: 188 GGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII---KNRGHDRAVDYWALGILMHEL 244
DFG + + + F GTP ++APE+I +D VD W+LGI EL
Sbjct: 197 ------DFGSASIMAPAN----XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E CLG + + + + +T ++ L YLH+ ++ RD+K N+LL
Sbjct: 131 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 190
Query: 61 GYVKL 65
G VKL
Sbjct: 191 GLVKL 195
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 29/116 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+++ L+ LH I+ DLKPEN+LL +G R G K
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQG--------------RSGIK------------ 242
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+DFG S + + +T + Y APE+I + +D W+LG ++ ELLTG
Sbjct: 243 VIDFGSS---CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ L+ LH I+ DLKPEN+LL +G
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQG 237
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 92 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 138
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 170
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 171 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 101 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 156
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 94 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 140
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 172
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 173 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 92 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 138
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 170
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 171 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 101 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 156
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 99 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 145
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 177
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 178 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 108 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 163
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 100 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 146
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 147 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 178
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 179 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 230
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 109 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 164
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 91 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 137
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 138 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 169
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 170 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 221
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 100 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 155
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 98 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 144
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 176
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 177 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 35/120 (29%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
+T ++ L YLH+ ++ RD+K N+LL G VKL
Sbjct: 120 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG---------------------- 157
Query: 188 GGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII---KNRGHDRAVDYWALGILMHEL 244
DFG + + + F GTP ++APE+I +D VD W+LGI EL
Sbjct: 158 ------DFGSASIMAPAN----XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+++E CLG + + + + +T ++ L YLH+ ++ RD+K N+LL
Sbjct: 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 151
Query: 61 GYVKL 65
G VKL
Sbjct: 152 GLVKL 156
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 96 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 142
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 174
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 175 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 105 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 160
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 98 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 144
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 176
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 177 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 96 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 142
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 174
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 175 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 105 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 160
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 102 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 148
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 149 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 180
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 181 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 232
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 111 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 166
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 94 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 140
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 172
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 173 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 29/116 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+++ L+ LH I+ DLKPEN+LL +G R G K
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQG--------------RSGIK------------ 242
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+DFG S + + +T + Y APE+I + +D W+LG ++ ELLTG
Sbjct: 243 VIDFGSS---CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ L+ LH I+ DLKPEN+LL +G
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQG 237
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 114 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 160
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 161 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 192
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 193 VADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 123 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 178
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 34/121 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ L+Y+H+ ++ RDLKP NLLL+ +K+
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI--------------------------- 169
Query: 192 KVDFGFSK----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLT 246
DFG ++ H+G T + T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 170 -CDFGLARVADPDHDHTGFLT-EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 247 G 247
Sbjct: 228 N 228
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 107 IVQDLMETDLYKLLKCQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++E GGE+++ +++R F + AS I + EA++YLH+ I RD+KPENLL
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 59 NR 60
++
Sbjct: 152 SK 153
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 60/165 (36%)
Query: 85 KYVYMLLEACLGGEVWTILRER--TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
K + +++E GGE+++ +++R F + AS I + EA+ +YLH+
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI-----------QYLHSI 136
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG 202
I RD+KPENLL ++ + ++ ++ DFGF+K
Sbjct: 137 NIAHRDVKPENLLYTSK-------------------RPNAILKLT------DFGFAKET- 170
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+G K +D++ D W+LG++M+ LL G
Sbjct: 171 -TGEK--------------------YDKSCDMWSLGVIMYILLCG 194
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
V+ A+++ H+RG+V RD+K EN+L+D RG KL
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKL-------------------------- 181
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPE-IIKNRGHDRAVDYWALGILMHELLTG 247
+DFG S L H T F GT Y PE I +++ H W+LGIL+++++ G
Sbjct: 182 --IDFG-SGALLHDEPYT-DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
V+ A+++ H+RG+V RD+K EN+L+D RG KL+
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLI 182
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 94 ASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 144
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEIIKN-RGHDRA 231
DFG ++ G +T+T T Y APEI+ + + A
Sbjct: 145 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 112 LLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 22/119 (18%)
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGY---VKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+A+++LH + DLKPEN+L N Y LE K D + S
Sbjct: 148 QAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLE------------KKRDERSVKSTAV 195
Query: 191 VKVDFGFS--KHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
VDFG + H HS T T Y APE+I G + D W++G ++ E G
Sbjct: 196 RVVDFGSATFDHEHHS-----TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 35 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKT 80
+A+++LH + DLKPEN+L N Y +L +K R R K+
Sbjct: 148 QAVKFLHDNKLTHTDLKPENILFVNSDY-ELTYNLEKKRDERSVKS 192
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 46/149 (30%)
Query: 106 RTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLE 165
+T D +A + I +I++ F +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 92 KTFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL- 147
Query: 166 FYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYV 218
DFG ++ G H W Y
Sbjct: 148 ---------------------------ADFGLARAFGVPVRTYXHEVVTLW-------YR 173
Query: 219 APEIIKN-RGHDRAVDYWALGILMHELLT 246
APEI+ + + AVD W+LG + E++T
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 147
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 39/128 (30%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPE-----YVAPEIIKNRGHDRAVDYWAL 237
+DFG ++ G S F PE Y APE+I G+ VD W++
Sbjct: 168 ----------LDFGLARTAGTS------FMMEPEVVTRYYRAPEVILGMGYKENVDLWSV 211
Query: 238 GILMHELL 245
G +M E++
Sbjct: 212 GCIMGEMV 219
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 39/128 (30%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPE-----YVAPEIIKNRGHDRAVDYWAL 237
+DFG ++ G S F PE Y APE+I G+ VD W++
Sbjct: 168 ----------LDFGLARTAGTS------FMMEPEVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 238 GILMHELL 245
G +M E++
Sbjct: 212 GCIMGEMV 219
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 35/128 (27%)
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
E + ++ ++ +++LH+ GI+ RDLKP N+++ + +K+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI------------------ 167
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTW---TFCGTPEYVAPEIIKNRGHDRAVDYWALGI 239
+DFG L + C + + T Y APE+I G+ VD W++G
Sbjct: 168 ----------LDFG----LARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGC 213
Query: 240 LMHELLTG 247
+M EL+ G
Sbjct: 214 IMGELVKG 221
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
D S++ ++ +++LH+ GI+ RDLKP N+++ + +K++
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 101 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 151
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEI-IKNRGHDRA 231
DFG ++ G +T+T T Y APEI + + + A
Sbjct: 152 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGXKYYSTA 191
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 192 VDIWSLGCIFAEMVT 206
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 151
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 95 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 145
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEIIKN-RGHDRA 231
DFG ++ G +T+T T Y APEI+ + + A
Sbjct: 146 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTA 185
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 186 VDIWSLGCIFAEMVT 200
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 145
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 94 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 144
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEI-IKNRGHDRA 231
DFG ++ G +T+T T Y APEI + + + A
Sbjct: 145 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGXKYYSTA 184
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 93 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 143
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEIIKN-RGHDRA 231
DFG ++ G +T+T T Y APEI+ + + A
Sbjct: 144 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 184 VDIWSLGCIFAEMVT 198
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 94 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 144
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEIIKN-RGHDRA 231
DFG ++ G +T+T T Y APEI+ + + A
Sbjct: 145 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 93 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 143
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEIIKN-RGHDRA 231
DFG ++ G +T+T T Y APEI+ + + A
Sbjct: 144 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 184 VDIWSLGCIFAEMVT 198
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 94 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 144
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEIIKN-RGHDRA 231
DFG ++ G +T+T T Y APEI+ + + A
Sbjct: 145 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 94 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 144
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEIIKN-RGHDRA 231
DFG ++ G +T+T T Y APEI+ + + A
Sbjct: 145 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 93 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 143
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEIIKN-RGHDRA 231
DFG ++ G +T+T T Y APEI+ + + A
Sbjct: 144 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 184 VDIWSLGCIFAEMVT 198
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 101 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 151
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEIIKN-RGHDRA 231
DFG ++ G +T+T T Y APEI+ + + A
Sbjct: 152 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTA 191
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 192 VDIWSLGCIFAEMVT 206
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 151
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKPENLL++ G +KL
Sbjct: 97 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL--------- 147
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 148 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 181
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKPENLL++ G +KL
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL 147
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKPENLL++ G +KL
Sbjct: 96 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL--------- 146
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 147 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 180
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVT 201
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKPENLL++ G +KL
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL 146
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 98 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 148
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF-CGTPEYVAPEIIKN-RGHDRA 231
DFG ++ G +T+T T Y APEI+ + + A
Sbjct: 149 -------------------ADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTA 188
Query: 232 VDYWALGILMHELLT 246
VD W+LG + E++T
Sbjct: 189 VDIWSLGCIFAEMVT 203
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 148
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKPENLL++ G +KL
Sbjct: 95 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL--------- 145
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 146 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 179
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKPENLL++ G +KL
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL 145
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKPENLL++ G +KL
Sbjct: 95 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL--------- 145
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 146 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 179
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKPENLL++ G +KL
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL 145
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKPENLL++ G +KL
Sbjct: 94 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL--------- 144
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 145 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 178
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKPENLL++ G +KL
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKL 144
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + YLH+ I+ RDL N L+ V + + ++ E + + +
Sbjct: 117 IASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
K K +T G P ++APE+I R +D VD ++ GI++ E++
Sbjct: 177 K--------------KRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 32/121 (26%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+I+ LEYLH++GIV +D+KP NLLL G +K+ +
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKIS------------------------AL 153
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDR----AVDYWALGILMHELLTG 247
V C+T G+P + PEI G D VD W+ G+ ++ + TG
Sbjct: 154 GVAEALHPFAADDTCRTSQ--GSPAFQPPEIA--NGLDTFSGFKVDIWSAGVTLYNITTG 209
Query: 248 M 248
+
Sbjct: 210 L 210
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
+I+ LEYLH++GIV +D+KP NLLL G +K+ +
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISA 152
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 31/126 (24%)
Query: 123 EALDFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGD 181
+ L ++ VI+ L YL + I+ RD+KP N+L+++RG +KL
Sbjct: 107 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL----------------- 149
Query: 182 SFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
DFG S L F GT Y++PE ++ + D W++G+ +
Sbjct: 150 -----------CDFGVSGQLIDEMANE--FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 196
Query: 242 HELLTG 247
E+ G
Sbjct: 197 VEMAVG 202
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTR-GIVFRDLKPENLLLDNRG 61
+E GG + +L++ + ++ VI+ L YL + I+ RD+KP N+L+++RG
Sbjct: 86 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 145
Query: 62 YVKL 65
+KL
Sbjct: 146 EIKL 149
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 32/124 (25%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
+ F+ +++ L Y+H GI+ RDLKP NL ++ +K+
Sbjct: 130 IQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKI-------------------- 169
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHE 243
+DFG ++ + + T Y APE+I N + + VD W++G +M E
Sbjct: 170 --------LDFGLAR---QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 218
Query: 244 LLTG 247
++TG
Sbjct: 219 MITG 222
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
L+ +G ++ +++ +D F+ +++ L Y+H GI+ RDLKP NL ++
Sbjct: 107 LVMPFMGTDLGKLMKHEKLGEDRI-QFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC 165
Query: 62 YVKLV 66
+K++
Sbjct: 166 ELKIL 170
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 115 SFITACVIEAL--DFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL-EFYPAGH 171
+ I A ++E + ++ +I+ ++YLH+ G++ RD+KP N+LL+ +VK+ +F +
Sbjct: 99 AVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRS 158
Query: 172 YI-IREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEI-IKNRGHD 229
++ IR I +++ + T Y APEI + + +
Sbjct: 159 FVNIRRVTNNIPLSINEN---------TENFDDDQPILTDYVATRWYRAPEILLGSTKYT 209
Query: 230 RAVDYWALGILMHELLTG 247
+ +D W+LG ++ E+L G
Sbjct: 210 KGIDMWSLGCILGEILCG 227
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 28/39 (71%)
Query: 27 SFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++ +I+ ++YLH+ G++ RD+KP N+LL+ +VK+
Sbjct: 112 QYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKV 150
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 74/187 (39%), Gaps = 40/187 (21%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
++++ + K L + F+ + ++++ E C T+L E + +
Sbjct: 53 IRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC----DHTVLHELDRYQRGVPEHLVKS-- 106
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
IT ++A+ + H + RD+KPEN+L+ +KL
Sbjct: 107 -----ITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKL------------------ 143
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPE-IIKNRGHDRAVDYWALGILM 241
DFGF++ L T Y +PE ++ + + VD WA+G +
Sbjct: 144 ----------CDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVF 193
Query: 242 HELLTGM 248
ELL+G+
Sbjct: 194 AELLSGV 200
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
++ E C + + R + ++ IT ++A+ + H + RD+KPEN+L+
Sbjct: 79 LVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKH 138
Query: 61 GYVKL 65
+KL
Sbjct: 139 SVIKL 143
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+++ L + H I+ RDLKP+NLL++ RG +KL
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLG-------------------------- 150
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
DFG ++ G + T Y AP+++ +R + ++D W+ G ++ E++TG
Sbjct: 151 --DFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 24 NAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
N + +++ L + H I+ RDLKP+NLL++ RG +KL
Sbjct: 108 NLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKL 149
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 94 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 144
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 145 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 178
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 97 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 147
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 148 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 181
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 147
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 97 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 147
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 148 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 181
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 147
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 97 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 147
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 148 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 181
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 147
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 96 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 146
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 147 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 180
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVT 201
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 146
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 94 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 144
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 145 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 178
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 98 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 148
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 149 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 182
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVT 203
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 148
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 94 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 144
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 145 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 178
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 96 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 146
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 147 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 180
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVT 201
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 146
>pdb|3SHR|A Chain A, Crystal Structure Of Cgmp-Dependent Protein Kinase Reveals
Novel Site Of Interchain Communication
pdb|3SHR|B Chain B, Crystal Structure Of Cgmp-Dependent Protein Kinase Reveals
Novel Site Of Interchain Communication
Length = 299
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
E +E+L + F+ L PE +L ++ Y G YIIR+GA+GD+FFIIS G+V V
Sbjct: 154 EYMEFLKSVP-TFQSL-PEEILSKLADVLEETHYENGEYIIRQGARGDTFFIISKGKVNV 211
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 93 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 143
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 144 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 177
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 29/116 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+++ L+ LH I+ DLKPEN+LL +G R G K
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQG--------------RSGIK------------ 242
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+DFG S + + + + Y APE+I + +D W+LG ++ ELLTG
Sbjct: 243 VIDFGSS---CYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ L+ LH I+ DLKPEN+LL +G
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQG 237
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 93 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 143
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 144 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 177
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 143
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 96 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 146
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 147 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 180
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVT 201
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 146
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 94 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 144
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 145 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 178
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 95 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 145
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 146 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 179
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 145
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 95 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 145
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 146 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 179
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 145
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 31/118 (26%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
++ +L Y+H+ GI RD+KP+NLLLD G +KL
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKL-------------------------- 183
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTG 247
+DFG +K L C Y APE+I + +D W+ G +M EL+ G
Sbjct: 184 --IDFGSAKILIAGEPNVSXICSR-YYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLV 66
++ +L Y+H+ GI RD+KP+NLLLD G +KL+
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLI 184
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
AS +T + + +++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 97 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL--------- 147
Query: 174 IREGAKGDSFFIISGGQVKVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIKN- 225
DFG ++ G H W Y APEI+
Sbjct: 148 -------------------ADFGLARAFGVPVRTYXHEVVTLW-------YRAPEILLGC 181
Query: 226 RGHDRAVDYWALGILMHELLT 246
+ + AVD W+LG + E++T
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++ L + H+ ++ RDLKP+NLL++ G +KL
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 147
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 34/121 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ L+Y+H+ ++ RDLKP NLL++ +K+
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKI--------------------------- 185
Query: 192 KVDFGFSK----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLT 246
DFG ++ H+G T T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 186 -CDFGLARIADPEHDHTGFLT-EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
Query: 247 G 247
Sbjct: 244 N 244
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLL++
Sbjct: 123 IVQDLMETDLYKLLKSQQLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLIN 178
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKL-EFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++Y+H+ GI+ RDLKP N L++ VK+ +F A + G+S IS + ++
Sbjct: 169 VKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA--RTVDYPENGNSQLPISPREDDMN 226
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPE-IIKNRGHDRAVDYWALGILMHELLTGMKES 251
H + + T Y APE I+ + A+D W++G + ELL +KE+
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 37 LEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++Y+H+ GI+ RDLKP N L++ VK+
Sbjct: 169 VKYVHSAGILHRDLKPANCLVNQDCSVKV 197
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ +AL+ +H GIV RD+KP N L + R L+ Y + + +G ++ Q
Sbjct: 126 LFKALKRIHQFGIVHRDVKPSNFLYNRR----LKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 192 KVDFGFSKHLGHSGC-----KTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELL 245
+ S C + GTP + APE++ K A+D W+ G++ LL
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 246 TG 247
+G
Sbjct: 242 SG 243
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ +AL+ +H GIV RD+KP N L + R
Sbjct: 126 LFKALKRIHQFGIVHRDVKPSNFLYNRR 153
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 198
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 199 --CDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLD 190
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 30/115 (26%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
AL +LH++G+V D+KP N+ L RG KL D
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGRCKLG----------------------------D 200
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMK 249
FG LG +G G P Y+APE+++ + A D ++LG+ + E+ M+
Sbjct: 201 FGLLVELGTAGAGE-VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNME 253
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
AL +LH++G+V D+KP N+ L RG KL
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGRCKL 198
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 176
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 177 --CDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLD 168
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 176
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 177 --CDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLD 168
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 31/117 (26%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKL----------------------------C 184
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 185 DFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 240
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLD 58
+L Y+H+ GI RD+KP+NLLLD
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLD 175
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 32/139 (23%)
Query: 106 RTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLE 165
RT D + A I+ L + L++LH IV RDLKPEN+L+ + G VKL
Sbjct: 106 RTYLDKAPPPGLPAETIKDL---MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL- 161
Query: 166 FYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN 225
DFG ++ + T T Y APE++
Sbjct: 162 ---------------------------ADFGLARIYSYQMALTPVVV-TLWYRAPEVLLQ 193
Query: 226 RGHDRAVDYWALGILMHEL 244
+ VD W++G + E+
Sbjct: 194 STYATPVDMWSVGCIFAEM 212
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 34 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+ L++LH IV RDLKPEN+L+ + G VKL
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKL 161
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 98 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 144
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 176
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 177 VADPDHDHTGF-LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 164
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 165 --CDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD 156
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 47/173 (27%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
T + K VY +++ + +++ +L+ + +D+ F+ ++ L+Y+
Sbjct: 99 TIEQMKDVY-IVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------ILRGLKYI 145
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H+ ++ RDLKP NLLL+ +K+ DFG ++
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKI----------------------------CDFGLAR 177
Query: 200 ----HLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLTG 247
H+G T Y APEI+ N +G+ +++D W++G ++ E+L+
Sbjct: 178 VADPDHDHTGF-LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLD 58
+++ + +++ +L+ + +D+ F+ ++ L+Y+H+ ++ RDLKP NLLL+
Sbjct: 108 IVQDLMETDLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIHSANVLHRDLKPSNLLLN 163
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 31/117 (26%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKL----------------------------C 173
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 174 DFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 229
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLD 58
+L Y+H+ GI RD+KP+NLLLD
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLD 164
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 164
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 165 --CDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD 156
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 164
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 165 --CDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD 156
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 164
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 165 --CDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD 156
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 29/114 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ L++LH+ +V RDLKP+N+L+ + G +KL
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL--------------------------- 161
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG ++ T + T Y APE++ + VD W++G + E+
Sbjct: 162 -ADFGLARIYSFQMALT-SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++ L++LH+ +V RDLKP+N+L+ + G +KL
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL 161
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 165
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 166 --CDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 222
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLD 157
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 29/114 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ L++LH+ +V RDLKP+N+L+ + G +KL
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL--------------------------- 161
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG ++ T + T Y APE++ + VD W++G + E+
Sbjct: 162 -ADFGLARIYSFQMALT-SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++ L++LH+ +V RDLKP+N+L+ + G +KL
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL 161
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 168
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 169 --CDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 225
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLLD 160
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 192
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 193 --CDFGSAKQLVRGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 249
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLD 184
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 198
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 199 --CDFGSAKQLVRGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLD 190
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 200
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 201 --CDFGSAKQLVRGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 257
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLD 192
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 29/113 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ L++LH+ +V RDLKP+N+L+ + G +KL
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL--------------------------- 161
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
DFG ++ T + T Y APE++ + VD W++G + E+
Sbjct: 162 -ADFGLARIYSFQMALT-SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++ L++LH+ +V RDLKP+N+L+ + G +KL
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL 161
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 169
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 170 --CDFGSAKQLVRGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 226
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLD 161
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 202
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 203 --CDFGSAKQLVRGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 259
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLD 194
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 177
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 178 --CDFGSAKQLVRGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 234
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLLD 169
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 164
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 165 --CDFGSAKQLVRGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD 156
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 39/160 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V++++E C GE+ + L+ R F + AS I + A TA L YL ++ V
Sbjct: 85 VWIIMELCTLGELRSFLQVRK-FSLDLASLI----LYAYQLSTA-----LAYLESKRFVH 134
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+ N+L+ + VKL DFG S+++ S
Sbjct: 135 RDIAARNVLVSSNDCVKLG----------------------------DFGLSRYMEDSTX 166
Query: 207 KTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ P +++APE I R A D W G+ M E+L
Sbjct: 167 XKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE-ALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GE+ + L+ R D A+ + A + AL YL ++ V RD+ N+L+ +
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 146
Query: 60 RGYVKL 65
VKL
Sbjct: 147 NDCVKL 152
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 243
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 244 --CDFGSAKQLVRGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 300
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLD 235
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 164
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 165 --CDFGSAKQLVRGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD 156
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+ +L Y+H+ GI RD+KP+NLLLD + +KL
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL-------------------------- 164
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K L C Y APE+I + ++D W+ G ++ ELL G
Sbjct: 165 --CDFGSAKQLVRGEPNVSYICSR-YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLD 58
+ +L Y+H+ GI RD+KP+NLLLD
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD 156
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 32/140 (22%)
Query: 106 RTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLE 165
RT D + A I+ L + L++LH IV RDLKPEN+L+ + G VKL
Sbjct: 98 RTYLDKAPPPGLPAETIKDL---MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL- 153
Query: 166 FYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN 225
DFG ++ + + T Y APE++
Sbjct: 154 ---------------------------ADFGLARIYSYQ-MALFPVVVTLWYRAPEVLLQ 185
Query: 226 RGHDRAVDYWALGILMHELL 245
+ VD W++G + E+
Sbjct: 186 STYATPVDMWSVGCIFAEMF 205
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 34 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+ L++LH IV RDLKPEN+L+ + G VKL
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKL 153
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ +++ +LH+ + DLKPEN+L Y + + P K D +I+
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTE-AYNPK--------IKRDERTLINPDIK 177
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
VDFG + + T T Y APE+I G + D W++G ++ E G
Sbjct: 178 VVDFGSATYDDEHHS---TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRL 77
+ +++ +LH+ + DLKPEN+L Y + + K K + L
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 27/120 (22%)
Query: 132 VIEALEYLHTRGIV---FRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
+ + YLH IV RDLK N+L I+++ GD +S
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNIL-----------------ILQKVENGD----LSN 152
Query: 189 GQVKV-DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
+K+ DFG ++ H K + G ++APE+I+ + D W+ G+L+ ELLTG
Sbjct: 153 KILKITDFGLAREW-HRTTKM-SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
AL +LH + DLKPEN+L N + L Y + K S + G D
Sbjct: 167 ALRFLHENQLTHTDLKPENILFVNSEFETL--YNEHKSCEEKSVKNTSIRVADFGSATFD 224
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
H H+ T T Y PE+I G + D W++G ++ E G
Sbjct: 225 -----HEHHT-----TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKT 80
AL +LH + DLKPEN+L N + L + K + + T
Sbjct: 167 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 211
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
AL +LH + DLKPEN+L N + L Y + K S + G D
Sbjct: 144 ALRFLHENQLTHTDLKPENILFVNSEFETL--YNEHKSCEEKSVKNTSIRVADFGSATFD 201
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
H H+ T T Y PE+I G + D W++G ++ E G
Sbjct: 202 -----HEHHT-----TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKT 80
AL +LH + DLKPEN+L N + L + K + + T
Sbjct: 144 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 188
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
AL +LH + DLKPEN+L N + L Y + K S + G D
Sbjct: 135 ALRFLHENQLTHTDLKPENILFVNSEFETL--YNEHKSCEEKSVKNTSIRVADFGSATFD 192
Query: 195 FGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
H H+ T T Y PE+I G + D W++G ++ E G
Sbjct: 193 -----HEHHT-----TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKT 80
AL +LH + DLKPEN+L N + L + K + + T
Sbjct: 135 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 179
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 31/124 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ E + YLH + + RDL N+LLDN VK+
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIG-------------------------- 176
Query: 192 KVDFGFSKHL--GHSGCKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELLTGM 248
DFG +K + GH + +P + APE +K A D W+ G+ ++ELLT
Sbjct: 177 --DFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 234
Query: 249 KESN 252
S
Sbjct: 235 DSSQ 238
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+ E + YLH + + RDL N+LLDN VK+
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKI 175
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 32/139 (23%)
Query: 106 RTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLE 165
RT D + A I+ L + L++LH IV RDLKPEN+L+ + G VKL
Sbjct: 98 RTYLDKAPPPGLPAETIKDL---MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL- 153
Query: 166 FYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN 225
DFG ++ + T Y APE++
Sbjct: 154 ---------------------------ADFGLARIYSYQMALAPVVV-TLWYRAPEVLLQ 185
Query: 226 RGHDRAVDYWALGILMHEL 244
+ VD W++G + E+
Sbjct: 186 STYATPVDMWSVGCIFAEM 204
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 34 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+ L++LH IV RDLKPEN+L+ + G VKL
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKL 153
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 37/159 (23%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V++++E C GE+ + L+ R D A+ + A + AL YL ++ V
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST----------ALAYLESKRFVH 134
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+ N+L+ + VKL G + + + +++ S G++ +
Sbjct: 135 RDIAARNVLVSSNDCVKL-----GDFGLSRYMEDSTYYKASKGKLPI------------- 176
Query: 207 KTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+++APE I R A D W G+ M E+L
Sbjct: 177 ---------KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE-ALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GE+ + L+ R D A+ + A + AL YL ++ V RD+ N+L+ +
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 146
Query: 60 RGYVKL 65
VKL
Sbjct: 147 NDCVKL 152
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 39/160 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V++++E C GE+ + L+ R D A+ + A + AL YL ++ V
Sbjct: 113 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST----------ALAYLESKRFVH 162
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+ N+L+ + VKL DFG S+++ S
Sbjct: 163 RDIAARNVLVSSNDCVKLG----------------------------DFGLSRYMEDSTY 194
Query: 207 KTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ P +++APE I R A D W G+ M E+L
Sbjct: 195 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE-ALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GE+ + L+ R D A+ + A + AL YL ++ V RD+ N+L+ +
Sbjct: 115 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 174
Query: 60 RGYVKL 65
VKL
Sbjct: 175 NDCVKL 180
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 39/160 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V++++E C GE+ + L+ R D A+ + A + AL YL ++ V
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST----------ALAYLESKRFVH 134
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+ N+L+ + VKL DFG S+++ S
Sbjct: 135 RDIAARNVLVSSNDCVKLG----------------------------DFGLSRYMEDSTY 166
Query: 207 KTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ P +++APE I R A D W G+ M E+L
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE-ALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GE+ + L+ R D A+ + A + AL YL ++ V RD+ N+L+ +
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 146
Query: 60 RGYVKL 65
VKL
Sbjct: 147 NDCVKL 152
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 39/160 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V++++E C GE+ + L+ R D A+ + A + AL YL ++ V
Sbjct: 90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST----------ALAYLESKRFVH 139
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+ N+L+ + VKL DFG S+++ S
Sbjct: 140 RDIAARNVLVSSNDCVKLG----------------------------DFGLSRYMEDSTY 171
Query: 207 KTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ P +++APE I R A D W G+ M E+L
Sbjct: 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE-ALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GE+ + L+ R D A+ + A + AL YL ++ V RD+ N+L+ +
Sbjct: 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 151
Query: 60 RGYVKL 65
VKL
Sbjct: 152 NDCVKL 157
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 39/160 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V++++E C GE+ + L+ R D A+ + A + AL YL ++ V
Sbjct: 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST----------ALAYLESKRFVH 131
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+ N+L+ + VKL DFG S+++ S
Sbjct: 132 RDIAARNVLVSSNDCVKLG----------------------------DFGLSRYMEDSTY 163
Query: 207 KTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ P +++APE I R A D W G+ M E+L
Sbjct: 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE-ALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GE+ + L+ R D A+ + A + AL YL ++ V RD+ N+L+ +
Sbjct: 84 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 143
Query: 60 RGYVKL 65
VKL
Sbjct: 144 NDCVKL 149
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V EA+EYL ++ + RDL N L++++G VK+ + Y++
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL----------------- 155
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
D ++ +G W+ PE++ D WA G+LM E+ +
Sbjct: 156 --DDEYTSSVGSKFPVRWS--------PPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V EA+EYL ++ + RDL N L++++G VK+
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 145
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 39/160 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V++++E C GE+ + L+ R D A+ + A + AL YL ++ V
Sbjct: 87 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST----------ALAYLESKRFVH 136
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+ N+L+ + VKL DFG S+++ S
Sbjct: 137 RDIAARNVLVSSNDCVKLG----------------------------DFGLSRYMEDSTY 168
Query: 207 KTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ P +++APE I R A D W G+ M E+L
Sbjct: 169 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE-ALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GE+ + L+ R D A+ + A + AL YL ++ V RD+ N+L+ +
Sbjct: 89 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 148
Query: 60 RGYVKL 65
VKL
Sbjct: 149 NDCVKL 154
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 39/160 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V++++E C GE+ + L+ R F + AS I + A TA L YL ++ V
Sbjct: 465 VWIIMELCTLGELRSFLQVRK-FSLDLASLI----LYAYQLSTA-----LAYLESKRFVH 514
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+ N+L+ + VKL DFG S+++ S
Sbjct: 515 RDIAARNVLVSSNDCVKLG----------------------------DFGLSRYMEDSTY 546
Query: 207 KTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ P +++APE I R A D W G+ M E+L
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE-ALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GE+ + L+ R D A+ + A + AL YL ++ V RD+ N+L+ +
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 526
Query: 60 RGYVKL 65
VKL
Sbjct: 527 NDCVKL 532
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 32/139 (23%)
Query: 106 RTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLE 165
RT D + A I+ L + L++LH IV RDLKPEN+L+ + G VKL
Sbjct: 98 RTYLDKAPPPGLPAETIKDL---MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL- 153
Query: 166 FYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN 225
DFG ++ + T Y APE++
Sbjct: 154 ---------------------------ADFGLARIYSYQMALDPVVV-TLWYRAPEVLLQ 185
Query: 226 RGHDRAVDYWALGILMHEL 244
+ VD W++G + E+
Sbjct: 186 STYATPVDMWSVGCIFAEM 204
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 34 IEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+ L++LH IV RDLKPEN+L+ + G VKL
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKL 153
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 39/160 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V++++E C GE+ + L+ R D A+ + A + AL YL ++ V
Sbjct: 88 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST----------ALAYLESKRFVH 137
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+ N+L+ + VKL DFG S+++ S
Sbjct: 138 RDIAARNVLVSSNDCVKLG----------------------------DFGLSRYMEDSTY 169
Query: 207 KTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ P +++APE I R A D W G+ M E+L
Sbjct: 170 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE-ALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GE+ + L+ R D A+ + A + AL YL ++ V RD+ N+L+ +
Sbjct: 90 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 149
Query: 60 RGYVKL 65
VKL
Sbjct: 150 NDCVKL 155
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V EA+EYL ++ + RDL N L++++G VK+ + Y++
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL----------------- 156
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
D ++ +G W+ PE++ D WA G+LM E+ +
Sbjct: 157 --DDEYTSSVGSKFPVRWS--------PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V EA+EYL ++ + RDL N L++++G VK+
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 146
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V EA+EYL ++ + RDL N L++++G VK+ + Y++
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL----------------- 151
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
D ++ +G W+ PE++ D WA G+LM E+ +
Sbjct: 152 --DDEYTSSVGSKFPVRWS--------PPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V EA+EYL ++ + RDL N L++++G VK+
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 141
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V EA+EYL ++ + RDL N L++++G VK+ + Y++
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL----------------- 162
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
D ++ +G W+ PE++ D WA G+LM E+ +
Sbjct: 163 --DDEYTSSVGSKFPVRWS--------PPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V EA+EYL ++ + RDL N L++++G VK+
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 152
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V EA+EYL ++ + RDL N L++++G VK+ + Y++
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL----------------- 171
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
D ++ +G W+ PE++ D WA G+LM E+ +
Sbjct: 172 --DDEYTSSVGSKFPVRWS--------PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V EA+EYL ++ + RDL N L++++G VK+
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 161
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 29/117 (24%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ + Y H R ++ RDLKP+NLL++ G +K+
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKI--------------------------- 141
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
DFG ++ G K T Y AP+++ ++ + +D W++G + E++ G
Sbjct: 142 -ADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
LL+ C GG L T A SF+ ++ + Y H R ++ RDLKP+NLL++ G
Sbjct: 89 LLDVCEGG-----LESVT-----AKSFLLQ-LLNGIAYCHDRRVLHRDLKPQNLLINREG 137
Query: 62 YVKL 65
+K+
Sbjct: 138 ELKI 141
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 37/127 (29%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYPAGHYIIREGAKGDSFFI 185
+ E + YLH++ + R+L N+LLDN VK+ + P GH R GDS
Sbjct: 126 ICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 186 ISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ APE +K A D W+ G+ ++ELL
Sbjct: 186 -------------------------------WYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 246 TGMKESN 252
T S
Sbjct: 215 THCDSSQ 221
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+ E + YLH++ + R+L N+LLDN VK+
Sbjct: 126 ICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKI 158
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 29/117 (24%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ + Y H R ++ RDLKP+NLL++ G +K+
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKI--------------------------- 141
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
DFG ++ G K T Y AP+++ ++ + +D W++G + E++ G
Sbjct: 142 -ADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
LL+ C GG L T A SF+ ++ + Y H R ++ RDLKP+NLL++ G
Sbjct: 89 LLDVCEGG-----LESVT-----AKSFLLQ-LLNGIAYCHDRRVLHRDLKPQNLLINREG 137
Query: 62 YVKL 65
+K+
Sbjct: 138 ELKI 141
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 29/117 (24%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ + Y H R ++ RDLKP+NLL++ G +K+
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKI--------------------------- 141
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHELLTG 247
DFG ++ G K T Y AP+++ ++ + +D W++G + E++ G
Sbjct: 142 -ADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
LL+ C GG L T A SF+ ++ + Y H R ++ RDLKP+NLL++ G
Sbjct: 89 LLDVCEGG-----LESVT-----AKSFLLQ-LLNGIAYCHDRRVLHRDLKPQNLLINREG 137
Query: 62 YVKL 65
+K+
Sbjct: 138 ELKI 141
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 37/133 (27%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
V EA+ ++ ++ AL YLH+ G+V+ DLKPEN++L
Sbjct: 181 VAEAIAYLLE-ILPALSYLHSIGLVYNDLKPENIMLTEE--------------------- 218
Query: 181 DSFFIISGGQVK-VDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGI 239
Q+K +D G + G GTP + APEI++ G A D + +G
Sbjct: 219 ---------QLKLIDLGAVSRINSFGY----LYGTPGFQAPEIVRT-GPTVATDIYTVGR 264
Query: 240 LMHELLTGMKESN 252
+ L + N
Sbjct: 265 TLAALTLDLPTRN 277
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLL 57
++ AL YLH+ G+V+ DLKPEN++L
Sbjct: 191 ILPALSYLHSIGLVYNDLKPENIML 215
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 20/122 (16%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
I +I +EY+HT+ +++RD+KPEN L+ G + + II
Sbjct: 105 IAIQLITRMEYVHTKSLIYRDVKPENFLVGRPG----------------TKRQHAIHIID 148
Query: 188 GGQVK--VDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
G K +D KH+ + K+ T GT Y++ + R D ALG + L
Sbjct: 149 FGLAKEYIDPETKKHIPYREHKSLT--GTARYMSINTHLGKEQSRRDDLEALGHMFMYFL 206
Query: 246 TG 247
G
Sbjct: 207 RG 208
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
I +I +EY+HT+ +++RD+KPEN L+ G
Sbjct: 105 IAIQLITRMEYVHTKSLIYRDVKPENFLVGRPG 137
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 37/159 (23%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V++++E C GE+ + L+ R F + AS I + A TA L YL ++ V
Sbjct: 85 VWIIMELCTLGELRSFLQVRK-FSLDLASLI----LYAYQLSTA-----LAYLESKRFVH 134
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+ N+L+ VKL G + + + +++ S G++ +
Sbjct: 135 RDIAARNVLVSATDCVKL-----GDFGLSRYMEDSTYYKASKGKLPI------------- 176
Query: 207 KTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+++APE I R A D W G+ M E+L
Sbjct: 177 ---------KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE-ALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GE+ + L+ R D A+ + A + AL YL ++ V RD+ N+L+
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSA 146
Query: 60 RGYVKL 65
VKL
Sbjct: 147 TDCVKL 152
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 43/124 (34%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ + + H I+ RDLKP+NLL+++ G +KL
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKL--------------------------- 160
Query: 192 KVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHE 243
DFG ++ G H W Y AP+++ ++ + +VD W++G + E
Sbjct: 161 -ADFGLARAFGIPVRSYTHEVVTLW-------YRAPDVLMGSKKYSTSVDIWSIGCIFAE 212
Query: 244 LLTG 247
++TG
Sbjct: 213 MITG 216
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 18 RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+T D+ ++ + + H I+ RDLKP+NLL+++ G +KL
Sbjct: 113 KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKL 160
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 43/124 (34%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ + + H I+ RDLKP+NLL+++ G +KL
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKL--------------------------- 160
Query: 192 KVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEIIK-NRGHDRAVDYWALGILMHE 243
DFG ++ G H W Y AP+++ ++ + +VD W++G + E
Sbjct: 161 -ADFGLARAFGIPVRSYTHEVVTLW-------YRAPDVLMGSKKYSTSVDIWSIGCIFAE 212
Query: 244 LLTG 247
++TG
Sbjct: 213 MITG 216
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 18 RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+T D+ ++ + + H I+ RDLKP+NLL+++ G +KL
Sbjct: 113 KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKL 160
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 32/122 (26%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+++ + YLH ++ RDLKP N+L ++ EG + G+V
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANIL-----------------VMGEGPER--------GRV 171
Query: 192 KV-DFGFSKHLGHSGCKTW----TFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELL 245
K+ D GF++ L +S K T Y APE++ R + +A+D WA+G + ELL
Sbjct: 172 KIADMGFAR-LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
Query: 246 TG 247
T
Sbjct: 231 TS 232
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLL----DNRGYVKLVS 67
+++ + YLH ++ RDLKP N+L+ RG VK+
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIAD 175
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 37/127 (29%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYPAGHYIIREGAKGDSFFI 185
+ E + YLH + + R+L N+LLDN VK+ + P GH R GDS
Sbjct: 126 ICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 186 ISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ APE +K A D W+ G+ ++ELL
Sbjct: 186 -------------------------------WYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 246 TGMKESN 252
T S
Sbjct: 215 THCDSSQ 221
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+ E + YLH + + R+L N+LLDN VK+
Sbjct: 126 ICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKI 158
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 20/122 (16%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
I ++ +EY+H++ +++RD+KPEN L+ +G K II
Sbjct: 102 IAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQG----------------NKKEHVIHIID 145
Query: 188 GGQVK--VDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
G K +D KH+ + K+ T GT Y++ + R D ALG + L
Sbjct: 146 FGLAKEYIDPETKKHIPYREHKSLT--GTARYMSINTHLGKEQSRRDDLEALGHMFMYFL 203
Query: 246 TG 247
G
Sbjct: 204 RG 205
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVK 64
I ++ +EY+H++ +++RD+KPEN L+ +G K
Sbjct: 102 IAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKK 137
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 6 CLGGEVWTILRE-RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
C G +++++R+ + D N I +++ + YLH +GI+ +DLK +N+ DN
Sbjct: 111 CKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDN 165
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 41/130 (31%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHY----IIREGAKGDSF 183
I +++ + YLH +GI+ +DLK +N+ DN V +F G + +++ G + D
Sbjct: 135 IAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDF---GLFSISGVLQAGRREDKL 191
Query: 184 FIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD---------RAVDY 234
I +G W C ++APEII+ D + D
Sbjct: 192 RIQNG--------------------W-LC----HLAPEIIRQLSPDTEEDKLPFSKHSDV 226
Query: 235 WALGILMHEL 244
+ALG + +EL
Sbjct: 227 FALGTIWYEL 236
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 27/115 (23%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V EA+EYL ++ + RDL N L++++G VK+ + Y++ D + G +
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL-----DDEYTSSRGSKF 168
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
V + PE++ D WA G+LM E+ +
Sbjct: 169 PV----------------------RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V EA+EYL ++ + RDL N L++++G VK+
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 146
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 39/160 (24%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V++++E C GE+ + L+ R F + AS I + A TA L YL ++ V
Sbjct: 465 VWIIMELCTLGELRSFLQVRK-FSLDLASLI----LYAYQLSTA-----LAYLESKRFVH 514
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGC 206
RD+ N+L+ VKL DFG S+++ S
Sbjct: 515 RDIAARNVLVSATDCVKLG----------------------------DFGLSRYMEDSTY 546
Query: 207 KTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ P +++APE I R A D W G+ M E+L
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIE-ALEYLHTRGIVFRDLKPENLLLDN 59
+++E C GE+ + L+ R D A+ + A + AL YL ++ V RD+ N+L+
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSA 526
Query: 60 RGYVKL 65
VKL
Sbjct: 527 TDCVKL 532
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ +++ +LH+ + DLKPEN+L Y + + P K D +I+
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTE-AYNPK--------IKRDERTLINPDIK 177
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
VDFG + + T Y APE+I G + D W++G ++ E G
Sbjct: 178 VVDFGSATYDDEHHS---TLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRL 77
+ +++ +LH+ + DLKPEN+L Y + + K K + L
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 25/120 (20%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V E + YL ++ + RDL NLLL R VK+ + ++R + D +++ +
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF----GLMRALPQNDDHYVMQEHR- 178
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMKES 251
KV F + APE +K R A D W G+ + E+ T +E
Sbjct: 179 KVPFA--------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V E + YL ++ + RDL NLLL R VK+
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKI 156
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 25/120 (20%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V E + YL ++ + RDL NLLL R VK+ + ++R + D +++ +
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF----GLMRALPQNDDHYVMQEHR- 178
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMKES 251
KV F + APE +K R A D W G+ + E+ T +E
Sbjct: 179 KVPFA--------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V E + YL ++ + RDL NLLL R VK+
Sbjct: 124 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKI 156
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 25/120 (20%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V E + YL ++ + RDL NLLL R VK+ + ++R + D +++ +
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF----GLMRALPQNDDHYVMQEHR- 174
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMKES 251
KV F + APE +K R A D W G+ + E+ T +E
Sbjct: 175 KVPFA--------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V E + YL ++ + RDL NLLL R VK+
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKI 152
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 25/120 (20%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V E + YL ++ + RDL NLLL R VK+ + ++R + D +++ +
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF----GLMRALPQNDDHYVMQEHR- 174
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMKES 251
KV F + APE +K R A D W G+ + E+ T +E
Sbjct: 175 KVPFA--------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V E + YL ++ + RDL NLLL R VK+
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKI 152
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 25/120 (20%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V E + YL ++ + RDL NLLL R VK+ + ++R + D +++ +
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF----GLMRALPQNDDHYVMQEHR- 184
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMKES 251
KV F + APE +K R A D W G+ + E+ T +E
Sbjct: 185 KVPFA--------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V E + YL ++ + RDL NLLL R VK+
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKI 162
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 22/124 (17%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF-I 185
I +I +EY+H++ +++RD+KPEN L I R G K I
Sbjct: 109 MIAIQLISRMEYVHSKNLIYRDVKPENFL-----------------IGRPGNKTQQVIHI 151
Query: 186 ISGGQVK--VDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHE 243
I G K +D KH+ + K+ T GT Y++ + R D ALG +
Sbjct: 152 IDFGLAKEYIDPETKKHIPYREHKSLT--GTARYMSINTHLGKEQSRRDDLEALGHMFMY 209
Query: 244 LLTG 247
L G
Sbjct: 210 FLRG 213
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 28 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
I +I +EY+H++ +++RD+KPEN L+ G
Sbjct: 109 MIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPG 142
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 41/197 (20%)
Query: 68 RKKKTRQTRLYKTFKDSKYV----YMLLEACLGGEVWTIL---RERTCFDD-----NAAS 115
R++ R+ +++ F + Y L E E W +L + T +++ + +
Sbjct: 70 REEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN 129
Query: 116 FITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIR 175
F+T + + ++ + LE +H +G RDLKP N+LL + G L +
Sbjct: 130 FLTE---DQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVL---------MD 177
Query: 176 EGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF--CGTPEYVAPEIIKNRGH---DR 230
G+ + + G + + + W C T Y APE+ + H D
Sbjct: 178 LGSMNQACIHVEGSRQALTL-----------QDWAAQRC-TISYRAPELFSVQSHCVIDE 225
Query: 231 AVDYWALGILMHELLTG 247
D W+LG +++ ++ G
Sbjct: 226 RTDVWSLGCVLYAMMFG 242
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ LE +H +G RDLKP N+LL + G L+
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLM 176
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 39/119 (32%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL + V RDL N+LL NR Y K+ D
Sbjct: 122 GMKYLEEKNFVHRDLAARNVLLVNRHYAKIS----------------------------D 153
Query: 195 FGFSKHLGHS-------GCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
FG SK LG W ++ APE I R D W+ G+ M E L+
Sbjct: 154 FGLSKALGADDSYYTARSAGKWPL----KWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++YL + V RDL N+LL NR Y K+
Sbjct: 122 GMKYLEEKNFVHRDLAARNVLLVNRHYAKI 151
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 56/186 (30%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACVIEALDFITACVIE 134
RLY +Y+YM++E C ++ + L+++ D S+ ++E
Sbjct: 76 RLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN------------MLE 122
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
A+ +H GIV DLKP N F I+ G +D
Sbjct: 123 AVHTIHQHGIVHSDLKPAN-----------------------------FLIVDGMLKLID 153
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRGHDR-----------AVDYWALGILM 241
FG + + + GT Y+ PE IK+ R D W+LG ++
Sbjct: 154 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 213
Query: 242 HELLTG 247
+ + G
Sbjct: 214 YYMTYG 219
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E C ++ + L+++ D ++EA+ +H GIV DLKP N L+ +
Sbjct: 89 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD- 146
Query: 61 GYVKL----VSRKKKTRQTRLYKTFKDSKYVYMLLEA 93
G +KL ++ + + T + K + YM EA
Sbjct: 147 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 183
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 35/117 (29%)
Query: 135 ALEYLHTR--GIVFRDLKPENLLLDN--RGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
AL +L T I+ DLKPEN+LL N R +K+
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKI-------------------------- 202
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
VDFG S LG + + + Y +PE++ +D A+D W+LG ++ E+ TG
Sbjct: 203 --VDFGSSCQLGQ---RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 56/186 (30%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACVIEALDFITACVIE 134
RLY +Y+YM++E C ++ + L+++ D S+ ++E
Sbjct: 72 RLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN------------MLE 118
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
A+ +H GIV DLKP N F I+ G +D
Sbjct: 119 AVHTIHQHGIVHSDLKPAN-----------------------------FLIVDGMLKLID 149
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRGHDR-----------AVDYWALGILM 241
FG + + + GT Y+ PE IK+ R D W+LG ++
Sbjct: 150 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 209
Query: 242 HELLTG 247
+ + G
Sbjct: 210 YYMTYG 215
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E C ++ + L+++ D ++EA+ +H GIV DLKP N L+ +
Sbjct: 85 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD- 142
Query: 61 GYVKL----VSRKKKTRQTRLYKTFKDSKYVYMLLEA 93
G +KL ++ + + T + K + YM EA
Sbjct: 143 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 179
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 56/186 (30%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACVIEALDFITACVIE 134
RLY +Y+YM++E C ++ + L+++ D S+ ++E
Sbjct: 92 RLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY------------WKNMLE 138
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
A+ +H GIV DLKP N F I+ G +D
Sbjct: 139 AVHTIHQHGIVHSDLKPAN-----------------------------FLIVDGMLKLID 169
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRGHDR-----------AVDYWALGILM 241
FG + + + GT Y+ PE IK+ R D W+LG ++
Sbjct: 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
Query: 242 HELLTG 247
+ + G
Sbjct: 230 YYMTYG 235
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E C ++ + L+++ D ++EA+ +H GIV DLKP N L+ +
Sbjct: 105 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD- 162
Query: 61 GYVKLV 66
G +KL+
Sbjct: 163 GMLKLI 168
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 35/117 (29%)
Query: 135 ALEYLHTR--GIVFRDLKPENLLLDN--RGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
AL +L T I+ DLKPEN+LL N R +K+
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKI-------------------------- 183
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
VDFG S LG + + + Y +PE++ +D A+D W+LG ++ E+ TG
Sbjct: 184 --VDFGSSCQLGQ---RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 56/186 (30%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACVIEALDFITACVIE 134
RLY +Y+YM++E C ++ + L+++ D S+ ++E
Sbjct: 120 RLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN------------MLE 166
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
A+ +H GIV DLKP N F I+ G +D
Sbjct: 167 AVHTIHQHGIVHSDLKPAN-----------------------------FLIVDGMLKLID 197
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRGHDR-----------AVDYWALGILM 241
FG + + + GT Y+ PE IK+ R D W+LG ++
Sbjct: 198 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
Query: 242 HELLTG 247
+ + G
Sbjct: 258 YYMTYG 263
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E C ++ + L+++ D ++EA+ +H GIV DLKP N L+ +
Sbjct: 133 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD- 190
Query: 61 GYVKL----VSRKKKTRQTRLYKTFKDSKYVYMLLEA 93
G +KL ++ + + T + K + YM EA
Sbjct: 191 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 227
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 34/168 (20%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+F++ VY++ E + ++ ++ + DD+ FI + A++ L
Sbjct: 82 SFENFNEVYIIQE-LMQTDLHRVISTQMLSDDHIQYFIYQ------------TLRAVKVL 128
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKL-EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFS 198
H ++ RDLKP NLL+++ +K+ +F A II E A +S GQ
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR--IIDESAADNSE---PTGQ-------- 175
Query: 199 KHLGHSGCKTWTFCGTPEYVAPEI-IKNRGHDRAVDYWALGILMHELL 245
SG F T Y APE+ + + + RA+D W+ G ++ EL
Sbjct: 176 ----QSGM--VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ + ++ ++ + DD+ FI + A++ LH ++ RDLKP NLL+++
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQ-TLRAVKVLHGSNVIHRDLKPSNLLINSNC 149
Query: 62 YVKL 65
+K+
Sbjct: 150 DLKV 153
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 45/127 (35%)
Query: 135 ALEYLHTR--GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVK 192
A++++H + I+ RDLK ENLLL N+G +KL
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIKL---------------------------- 179
Query: 193 VDFGFSKHLGHSGCKTW------------TFCGTPEYVAPEII---KNRGHDRAVDYWAL 237
DFG + + H +W T TP Y PEII N D WAL
Sbjct: 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWAL 239
Query: 238 GILMHEL 244
G +++ L
Sbjct: 240 GCILYLL 246
Score = 33.9 bits (76), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 36 ALEYLHTR--GIVFRDLKPENLLLDNRGYVKL 65
A++++H + I+ RDLK ENLLL N+G +KL
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIKL 179
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 56/186 (30%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACVIEALDFITACVIE 134
RLY +Y+YM++E C ++ + L+++ D S+ ++E
Sbjct: 73 RLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN------------MLE 119
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
A+ +H GIV DLKP N F I+ G +D
Sbjct: 120 AVHTIHQHGIVHSDLKPAN-----------------------------FLIVDGMLKLID 150
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRGHDR-----------AVDYWALGILM 241
FG + + + GT Y+ PE IK+ R D W+LG ++
Sbjct: 151 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 210
Query: 242 HELLTG 247
+ + G
Sbjct: 211 YYMTYG 216
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E C ++ + L+++ D ++EA+ +H GIV DLKP N L+ +
Sbjct: 86 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD- 143
Query: 61 GYVKLV 66
G +KL+
Sbjct: 144 GMLKLI 149
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGA 178
F +++AL+Y H++GI+ RD+KP N+++D++ + EFY PA Y +R +
Sbjct: 136 FYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVAS 195
Query: 179 KGDSFFIISGGQVKVDF 195
+ G ++ VD+
Sbjct: 196 R-----YFKGPELLVDY 207
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 26/33 (78%)
Query: 28 FITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
F +++AL+Y H++GI+ RD+KP N+++D++
Sbjct: 136 FYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 35/120 (29%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ L Y H + ++ RDLKP+NLL++ RG +KL
Sbjct: 109 LLRGLAYCHRQKVLHRDLKPQNLLINERGELKL--------------------------- 141
Query: 192 KVDFGFSKHLGHSGCKTWTFCG---TPEYVAPEI-IKNRGHDRAVDYWALGILMHELLTG 247
DFG ++ T T+ T Y P+I + + + +D W +G + +E+ TG
Sbjct: 142 -ADFGLAR---AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG 197
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
++ L Y H + ++ RDLKP+NLL++ RG +KL
Sbjct: 109 LLRGLAYCHRQKVLHRDLKPQNLLINERGELKLA 142
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 33/125 (26%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
I ++YLH + I+ RDLK N+ L VK+
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIG---------------------- 162
Query: 188 GGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYWALGILMH 242
DFG + SG + G+ ++APE+I+ + + D +A GI+++
Sbjct: 163 ------DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216
Query: 243 ELLTG 247
EL+TG
Sbjct: 217 ELMTG 221
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I ++YLH + I+ RDLK N+ L VK+
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKI 161
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 33/125 (26%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
I ++YLH + I+ RDLK N+ L VK+
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIG---------------------- 162
Query: 188 GGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYWALGILMH 242
DFG + SG + G+ ++APE+I+ + + D +A GI+++
Sbjct: 163 ------DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216
Query: 243 ELLTG 247
EL+TG
Sbjct: 217 ELMTG 221
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I ++YLH + I+ RDLK N+ L VK+
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKI 161
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 37/121 (30%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYPAGHYIIREGAKGDSFFI 185
+ E + YLH + + R L N+LLDN VK+ + P GH R GDS
Sbjct: 121 ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 180
Query: 186 ISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ APE +K A D W+ G+ ++ELL
Sbjct: 181 -------------------------------WYAPECLKECKFYYASDVWSFGVTLYELL 209
Query: 246 T 246
T
Sbjct: 210 T 210
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+ E + YLH + + R L N+LLDN VK+
Sbjct: 121 ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKI 153
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 29/116 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V EA+EYL ++ + RDL N L++++G VK+
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS-------------------------- 162
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG S+++ + P + PE++ D WA G+LM E+ +
Sbjct: 163 --DFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V EA+EYL ++ + RDL N L++++G VK+
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 161
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 128 ITACVIEALEYLHTR-GIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDS--- 182
I V++ L+YLHT+ I+ D+KPEN+LL N Y++ A + R GA S
Sbjct: 135 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW-QRSGAPPPSGSA 193
Query: 183 ---------FFIISGGQVKVDFGFSKHLGHSGCKTWTF------CGTPEYVAPEIIKNRG 227
F+++ + K + G W T +Y + E++ G
Sbjct: 194 VSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG 253
Query: 228 HDRAVDYWALGILMHELLTG 247
++ D W+ + EL TG
Sbjct: 254 YNTPADIWSTACMAFELATG 273
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 29 ITACVIEALEYLHTR-GIVFRDLKPENLLLD-NRGYVK 64
I V++ L+YLHT+ I+ D+KPEN+LL N Y++
Sbjct: 135 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR 172
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 56/186 (30%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACVIEALDFITACVIE 134
RLY +Y+YM++E C ++ + L+++ D S+ ++E
Sbjct: 92 RLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY------------WKNMLE 138
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
A+ +H GIV DLKP N F I+ G +D
Sbjct: 139 AVHTIHQHGIVHSDLKPAN-----------------------------FLIVDGMLKLID 169
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRGHDR-----------AVDYWALGILM 241
FG + + + GT Y+ PE IK+ R D W+LG ++
Sbjct: 170 FGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
Query: 242 HELLTG 247
+ + G
Sbjct: 230 YYMTYG 235
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E C ++ + L+++ D ++EA+ +H GIV DLKP N L+ +
Sbjct: 105 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD- 162
Query: 61 GYVKLV 66
G +KL+
Sbjct: 163 GMLKLI 168
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 37/121 (30%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYPAGHYIIREGAKGDSFFI 185
+ E + YLH + + R L N+LLDN VK+ + P GH R GDS
Sbjct: 120 ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 179
Query: 186 ISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
+ APE +K A D W+ G+ ++ELL
Sbjct: 180 -------------------------------WYAPECLKECKFYYASDVWSFGVTLYELL 208
Query: 246 T 246
T
Sbjct: 209 T 209
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+ E + YLH + + R L N+LLDN VK+
Sbjct: 120 ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKI 152
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGA 178
F +++AL+Y H++GI+ RD+KP N+++D++ + EFY PA Y +R +
Sbjct: 141 FYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVAS 200
Query: 179 KGDSFFIISGGQVKVDF 195
+ G ++ VD+
Sbjct: 201 R-----YFKGPELLVDY 212
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 26/33 (78%)
Query: 28 FITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
F +++AL+Y H++GI+ RD+KP N+++D++
Sbjct: 141 FYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 128 ITACVIEALEYLHTR-GIVFRDLKPENLLLD-NRGYVKLEFYPAGHYIIREGAKGDS--- 182
I V++ L+YLHT+ I+ D+KPEN+LL N Y++ A + R GA S
Sbjct: 151 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW-QRSGAPPPSGSA 209
Query: 183 ---------FFIISGGQVKVDFGFSKHLGHSGCKTWTF------CGTPEYVAPEIIKNRG 227
F+++ + K + G W T +Y + E++ G
Sbjct: 210 VSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG 269
Query: 228 HDRAVDYWALGILMHELLTG 247
++ D W+ + EL TG
Sbjct: 270 YNTPADIWSTACMAFELATG 289
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 29 ITACVIEALEYLHTR-GIVFRDLKPENLLLD-NRGYVK 64
I V++ L+YLHT+ I+ D+KPEN+LL N Y++
Sbjct: 151 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR 188
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 56/186 (30%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACVIEALDFITACVIE 134
RLY +Y+YM++E C ++ + L+++ D S+ ++E
Sbjct: 120 RLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN------------MLE 166
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
A+ +H GIV DLKP N F I+ G +D
Sbjct: 167 AVHTIHQHGIVHSDLKPAN-----------------------------FLIVDGMLKLID 197
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRGHDR-----------AVDYWALGILM 241
FG + + + GT Y+ PE IK+ R D W+LG ++
Sbjct: 198 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
Query: 242 HELLTG 247
+ + G
Sbjct: 258 YYMTYG 263
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E C ++ + L+++ D ++EA+ +H GIV DLKP N L+ +
Sbjct: 133 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD- 190
Query: 61 GYVKLV 66
G +KL+
Sbjct: 191 GMLKLI 196
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 35/117 (29%)
Query: 135 ALEYLHTR--GIVFRDLKPENLLLDN--RGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
AL +L T I+ DLKPEN+LL N R +K+
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRXAIKI-------------------------- 202
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
VDFG S LG + + + Y +PE++ +D A+D W+LG ++ E+ TG
Sbjct: 203 --VDFGSSCQLGQ---RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ L+Y+H+ ++ RDLKP NL ++ V +
Sbjct: 129 LLRGLKYIHSANVLHRDLKPANLFINTEDLV----------------------------L 160
Query: 192 KV-DFGFSK----HLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELL 245
K+ DFG ++ H H G + T Y +P ++ + +A+D WA G + E+L
Sbjct: 161 KIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 219
Query: 246 TG 247
TG
Sbjct: 220 TG 221
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ + ++ +L + +++A F+ ++ L+Y+H+ ++ RDLKP NL ++
Sbjct: 99 IVQEYMETDLANVLEQGPLLEEHARLFMYQ-LLRGLKYIHSANVLHRDLKPANLFINTED 157
Query: 62 YV 63
V
Sbjct: 158 LV 159
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 72/177 (40%), Gaps = 52/177 (29%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+F++ VY++ E + ++ ++ + DD+ FI + A++ L
Sbjct: 82 SFENFNEVYIIQE-LMQTDLHRVISTQMLSDDHIQYFIYQ------------TLRAVKVL 128
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
H ++ RDLKP NLL+++ +K+ DFG ++
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKV----------------------------CDFGLAR 160
Query: 200 HLGHSGC----KTWTFCGTPEYV------APEI-IKNRGHDRAVDYWALGILMHELL 245
+ S T G EYV APE+ + + + RA+D W+ G ++ EL
Sbjct: 161 IIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ + ++ ++ + DD+ FI + A++ LH ++ RDLKP NLL+++
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQ-TLRAVKVLHGSNVIHRDLKPSNLLINSNC 149
Query: 62 YVKL 65
+K+
Sbjct: 150 DLKV 153
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 34/132 (25%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
+I+ +D I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 131 MIKLID-IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG--------------- 174
Query: 181 DSFFIISGGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYW 235
DFG + SG + G+ ++APE+I+ + + D +
Sbjct: 175 -------------DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 221
Query: 236 ALGILMHELLTG 247
A GI+++EL+TG
Sbjct: 222 AFGIVLYELMTG 233
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 173
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 34/132 (25%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
+I+ +D I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 123 MIKLID-IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG--------------- 166
Query: 181 DSFFIISGGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYW 235
DFG + SG + G+ ++APE+I+ + + D +
Sbjct: 167 -------------DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 213
Query: 236 ALGILMHELLTG 247
A GI+++EL+TG
Sbjct: 214 AFGIVLYELMTG 225
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 129 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 165
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 40/194 (20%)
Query: 65 LVSRKKKT-RQTRLYKTFKDSKYVYM---LLEACLGGEVWTILRERTCFDDNAASFITAC 120
+V+ K+T R+ ++ K FK + + L GE ++ + + I +
Sbjct: 93 VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS 152
Query: 121 ---VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG 177
+E + + ++ L+Y+H+ ++ RDLKP NLL++ +K+
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG------------ 200
Query: 178 AKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTF----CGTPEYVAPEIIKN-RGHDRAV 232
DFG ++ L S + F T Y APE++ + + +A+
Sbjct: 201 ----------------DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAI 244
Query: 233 DYWALGILMHELLT 246
D W++G + E+L
Sbjct: 245 DLWSVGCIFGEMLA 258
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++ L+Y+H+ ++ RDLKP NLL++ +K+
Sbjct: 167 LLRGLKYMHSAQVIHRDLKPSNLLVNENCELKI 199
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 71/185 (38%), Gaps = 37/185 (20%)
Query: 42 TRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWT 101
R + + + PE +R L + R + T KD ++ Y+ +E C
Sbjct: 48 NRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA----- 102
Query: 102 ILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGY 161
L+E D A +E + + L +LH+ IV RDLKP N+L+
Sbjct: 103 TLQEYVEQKDFAH-----LGLEPITLLQQ-TTSGLAHLHSLNIVHRDLKPHNILIS---- 152
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLG---HSGCKTWTFCGTPEYV 218
P H I+ +IS DFG K L HS + GT ++
Sbjct: 153 -----MPNAHGKIKA--------MIS------DFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 219 APEII 223
APE++
Sbjct: 194 APEML 198
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 15/53 (28%)
Query: 5 ACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
A LG E T+L++ T L +LH+ IV RDLKP N+L+
Sbjct: 114 AHLGLEPITLLQQTTS---------------GLAHLHSLNIVHRDLKPHNILI 151
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 35/139 (25%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
+I+ +D I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 103 MIKLID-IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG--------------- 146
Query: 181 DSFFIISGGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYW 235
DFG + SG + G+ ++APE+I+ + + D +
Sbjct: 147 -------------DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 193
Query: 236 ALGILMHELLTG-MKESNV 253
A GI+++EL+TG + SN+
Sbjct: 194 AFGIVLYELMTGQLPYSNI 212
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 8/88 (9%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVY 88
I + ++YLH + I+ RDLK N+ L VK+ T ++R + +
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ------ 162
Query: 89 MLLEACLGGEVWTILRERTCFDDNAASF 116
E G +W D N SF
Sbjct: 163 --FEQLSGSILWMAPEVIRMQDKNPYSF 188
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 25/120 (20%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V E + YL ++ + RDL NLLL R VK+ + ++R + D ++ +
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF----GLMRALPQNDDHXVMQEHR- 174
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMKES 251
KV F + APE +K R A D W G+ + E+ T +E
Sbjct: 175 KVPFA--------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V E + YL ++ + RDL NLLL R VK+
Sbjct: 120 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKI 152
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 33/131 (25%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
+E + + ++ L+Y+H+ ++ RDLKP NLL++ +K+
Sbjct: 157 TLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG--------------- 201
Query: 181 DSFFIISGGQVKVDFGFSKHLGHSGCKTWTF----CGTPEYVAPEIIKN-RGHDRAVDYW 235
DFG ++ L S + F T Y APE++ + + +A+D W
Sbjct: 202 -------------DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLW 248
Query: 236 ALGILMHELLT 246
++G + E+L
Sbjct: 249 SVGCIFGEMLA 259
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
++ L+Y+H+ ++ RDLKP NLL++ +K+
Sbjct: 168 LLRGLKYMHSAQVIHRDLKPSNLLVNENCELKI 200
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 39/167 (23%)
Query: 87 VYMLLEACLGGEVWTILRER----TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
+ +++E C G + T LR + + D F+T +E L + V + +E+L +R
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT---LEHLIXYSFQVAKGMEFLASR 163
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG---AKGDSFFIISGGQVKVDFGFSK 199
+ RDL N+LL + VK+ + I ++ KGD+ +
Sbjct: 164 KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL------------- 210
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 211 ----------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 1 MLLEACLGGEVWTILRER----TCFDDNAASFITA--------CVIEALEYLHTRGIVFR 48
+++E C G + T LR + + D F+T V + +E+L +R + R
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHR 168
Query: 49 DLKPENLLLDNRGYVKL 65
DL N+LL + VK+
Sbjct: 169 DLAARNILLSEKNVVKI 185
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 87/199 (43%), Gaps = 51/199 (25%)
Query: 57 LDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASF 116
L+++ VKL + +++T +++ +++E C G ++T+L E + NA
Sbjct: 64 LNHKNIVKLFAIEEET----------TTRHKVLIMEFCPCGSLYTVLEEPS----NAYGL 109
Query: 117 ITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIRE 176
+ + + V+ + +L GIV R++KP N++ +I
Sbjct: 110 PESEFL----IVLRDVVGGMNHLRENGIVHRNIKPGNIM----------------RVI-- 147
Query: 177 GAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEI----IKNRGHDR-- 230
G G S + ++ DFG ++ L + + GT EY+ P++ + + H +
Sbjct: 148 GEDGQSVYKLT------DFGAAREL-EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKY 200
Query: 231 --AVDYWALGILMHELLTG 247
VD W++G+ + TG
Sbjct: 201 GATVDLWSIGVTFYHAATG 219
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 1 MLLEACLGGEVWTILRERT-CFDDNAASFITAC--VIEALEYLHTRGIVFRDLKPENLL 56
+++E C G ++T+L E + + + F+ V+ + +L GIV R++KP N++
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 25/120 (20%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V E + YL ++ + RDL NLLL R VK+ + ++R + D ++ +
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF----GLMRALPQNDDHXVMQEHR- 184
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMKES 251
KV F + APE +K R A D W G+ + E+ T +E
Sbjct: 185 KVPFA--------------------WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V E + YL ++ + RDL NLLL R VK+
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKI 162
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 41/126 (32%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYP--AGHYIIREGAKG 180
++ + + +EYL +R V RDL N+L+++ +VK+ + P +Y++RE +
Sbjct: 120 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 179
Query: 181 DSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGIL 240
F + APE + + R D W+ G++
Sbjct: 180 PIF---------------------------------WYAPESLSDNIFSRQSDVWSFGVV 206
Query: 241 MHELLT 246
++EL T
Sbjct: 207 LYELFT 212
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 14 ILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ R R D + ++ + + +EYL +R V RDL N+L+++ +VK+
Sbjct: 104 LQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA 156
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 41/126 (32%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYP--AGHYIIREGAKG 180
++ + + +EYL +R V RDL N+L+++ +VK+ + P +Y++RE +
Sbjct: 133 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 192
Query: 181 DSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGIL 240
F + APE + + R D W+ G++
Sbjct: 193 PIF---------------------------------WYAPESLSDNIFSRQSDVWSFGVV 219
Query: 241 MHELLT 246
++EL T
Sbjct: 220 LYELFT 225
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 14 ILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ R R D + ++ + + +EYL +R V RDL N+L+++ +VK+
Sbjct: 117 LQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA 169
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 41/126 (32%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYP--AGHYIIREGAKG 180
++ + + +EYL +R V RDL N+L+++ +VK+ + P +Y++RE +
Sbjct: 121 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 180
Query: 181 DSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGIL 240
F + APE + + R D W+ G++
Sbjct: 181 PIF---------------------------------WYAPESLSDNIFSRQSDVWSFGVV 207
Query: 241 MHELLT 246
++EL T
Sbjct: 208 LYELFT 213
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 14 ILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ R R D + ++ + + +EYL +R V RDL N+L+++ +VK+
Sbjct: 105 LQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA 157
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 31/118 (26%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ ++YL V RDL N+L+++ K+
Sbjct: 156 IAAGMKYLANMNYVHRDLAARNILVNSNLVCKVS-------------------------- 189
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG S+ L T+T G + APE I R A D W+ GI+M E++T
Sbjct: 190 --DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+L+D+ + KL
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVLIDHE-HRKLRL-------------------- 173
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 174 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+L+D+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDH 166
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF-I 185
I +I +EY+H++ +++RD+KPEN L I R G K I
Sbjct: 109 MIAIQLISRMEYVHSKNLIYRDVKPENFL-----------------IGRPGNKTQQVIHI 151
Query: 186 ISGGQVK--VDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHE 243
I K +D KH+ + K+ T GT Y++ + R D ALG +
Sbjct: 152 IDFALAKEYIDPETKKHIPYREHKSLT--GTARYMSINTHLGKEQSRRDDLEALGHMFMY 209
Query: 244 LLTG 247
L G
Sbjct: 210 FLRG 213
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 28 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
I +I +EY+H++ +++RD+KPEN L+ G
Sbjct: 109 MIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPG 142
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF-I 185
I +I +EY+H++ +++RD+KPEN L I R G K I
Sbjct: 130 MIAIQLISRMEYVHSKNLIYRDVKPENFL-----------------IGRPGNKTQQVIHI 172
Query: 186 ISGGQVK--VDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHE 243
I K +D KH+ + K+ T GT Y++ + R D ALG +
Sbjct: 173 IDFALAKEYIDPETKKHIPYREHKSLT--GTARYMSINTHLGKEQSRRDDLEALGHMFMY 230
Query: 244 LLTG 247
L G
Sbjct: 231 FLRG 234
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 28 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
I +I +EY+H++ +++RD+KPEN L+ G
Sbjct: 130 MIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPG 163
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 33/125 (26%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
I ++YLH + I+ RDLK N+ L VK+
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIG---------------------- 150
Query: 188 GGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYWALGILMH 242
DFG + SG + G+ ++APE+I+ + + D +A GI+++
Sbjct: 151 ------DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 204
Query: 243 ELLTG 247
EL+TG
Sbjct: 205 ELMTG 209
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I ++YLH + I+ RDLK N+ L VK+
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKI 149
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGAKGDSF 183
+++AL+Y H++GI+ RD+KP N+++D+ + EFY P Y +R ++
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---- 189
Query: 184 FIISGGQVKV---DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
G ++ V D+ +S + GC F G P + HD+ V
Sbjct: 190 -YFKGPELLVDLQDYDYSLDMWSLGC---MFAGMIFRKEPFFYGHDNHDQLV 237
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 24/27 (88%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDN 59
+++AL+Y H++GI+ RD+KP N+++D+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH 160
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 151 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 187
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 188 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 242
Query: 246 TGMKES 251
T +++S
Sbjct: 243 TYIEKS 248
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 151 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 186
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGAKGDSF 183
+++AL+Y H++GI+ RD+KP N+++D+ + EFY P Y +R ++
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---- 189
Query: 184 FIISGGQVKV---DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
G ++ V D+ +S + GC F G P + HD+ V
Sbjct: 190 -YFKGPELLVDLQDYDYSLDMWSLGC---MFAGMIFRKEPFFYGHDNHDQLV 237
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 24/27 (88%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDN 59
+++AL+Y H++GI+ RD+KP N+++D+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH 160
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 124 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 160
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 161 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 215
Query: 246 TGMKES 251
T +++S
Sbjct: 216 TYIEKS 221
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 124 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 159
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGAKGDSF 183
+++AL+Y H++GI+ RD+KP N+++D+ + EFY P Y +R ++
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---- 189
Query: 184 FIISGGQVKV---DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
G ++ V D+ +S + GC F G P + HD+ V
Sbjct: 190 -YFKGPELLVDLQDYDYSLDMWSLGC---MFAGMIFRKEPFFYGHDNHDQLV 237
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 24/27 (88%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDN 59
+++AL+Y H++GI+ RD+KP N+++D+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH 160
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGAKGDSF 183
+++AL+Y H++GI+ RD+KP N+++D+ + EFY P Y +R ++
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---- 190
Query: 184 FIISGGQVKV---DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
G ++ V D+ +S + GC F G P + HD+ V
Sbjct: 191 -YFKGPELLVDLQDYDYSLDMWSLGC---MFAGMIFRKEPFFYGHDNHDQLV 238
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 24/27 (88%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDN 59
+++AL+Y H++GI+ RD+KP N+++D+
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMIDH 161
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 119 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 155
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 156 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 210
Query: 246 TGMKES 251
T +++S
Sbjct: 211 TYIEKS 216
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 119 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 154
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGAKGDSF 183
+++AL+Y H++GI+ RD+KP N+++D+ + EFY P Y +R ++
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---- 190
Query: 184 FIISGGQVKV---DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
G ++ V D+ +S + GC F G P + HD+ V
Sbjct: 191 -YFKGPELLVDLQDYDYSLDMWSLGC---MFAGMIFRKEPFFYGHDNHDQLV 238
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 24/27 (88%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDN 59
+++AL+Y H++GI+ RD+KP N+++D+
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMIDH 161
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 31/185 (16%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
R Y + +++Y+ LE C + ++ + D+N I L I + V
Sbjct: 73 RYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV--- 128
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+LH+ I+ RDLKP+N+L+ + + + ++ I+ DF
Sbjct: 129 -AHLHSLKIIHRDLKPQNILVST----------SSRFTADQQTGAENLRILIS-----DF 172
Query: 196 GFSKHL--GHSGCKT--WTFCGTPEYVAPEIIK-------NRGHDRAVDYWALGILMHEL 244
G K L G S +T GT + APE+++ R R++D +++G + + +
Sbjct: 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 245 LTGMK 249
L+ K
Sbjct: 233 LSKGK 237
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLL 57
+ + +LH+ I+ RDLKP+N+L+
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILV 148
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGAKGDSF 183
+++AL+Y H++GI+ RD+KP N+++D+ + EFY P Y +R ++
Sbjct: 136 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---- 191
Query: 184 FIISGGQVKV---DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
G ++ V D+ +S + GC F G P + HD+ V
Sbjct: 192 -YFKGPELLVDLQDYDYSLDMWSLGC---MFAGMIFRKEPFFYGHDNHDQLV 239
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 24/27 (88%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDN 59
+++AL+Y H++GI+ RD+KP N+++D+
Sbjct: 136 LLKALDYCHSQGIMHRDVKPHNVMIDH 162
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 159
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 160 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
Query: 246 TGMKES 251
T +++S
Sbjct: 215 TYIEKS 220
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 158
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 159
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 160 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
Query: 246 TGMKES 251
T +++S
Sbjct: 215 TYIEKS 220
Score = 30.8 bits (68), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 158
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGAKGDSF 183
+++AL+Y H++GI+ RD+KP N+++D+ + EFY P Y +R ++
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---- 189
Query: 184 FIISGGQVKV---DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
G ++ V D+ +S + GC F G P + HD+ V
Sbjct: 190 -YFKGPELLVDLQDYDYSLDMWSLGC---MFAGMIFRKEPFFYGHDNHDQLV 237
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 24/27 (88%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDN 59
+++AL+Y H++GI+ RD+KP N+++D+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH 160
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 137 EYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
+++H GI+ RDLKP N LL+ VK+ + I + D + + + +
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTI---NSDKDIHIVNDLEEKEENEE 201
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPE-IIKNRGHDRAVDYWALGILMHELLTGMK 249
H + + + T Y APE I+ + ++D W+ G + ELL MK
Sbjct: 202 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMK 255
Score = 30.4 bits (67), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 38 EYLHTRGIVFRDLKPENLLLDNRGYVKL 65
+++H GI+ RDLKP N LL+ VK+
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCSVKI 172
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGAKGDSF 183
+++AL+Y H++GI+ RD+KP N+++D+ + EFY P Y +R ++
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---- 189
Query: 184 FIISGGQVKV---DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
G ++ V D+ +S + GC F G P + HD+ V
Sbjct: 190 -YFKGPELLVDLQDYDYSLDMWSLGC---MFAGMIFRKEPFFYGHDNHDQLV 237
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 24/27 (88%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDN 59
+++AL+Y H++GI+ RD+KP N+++D+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH 160
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 125 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 161
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 162 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 216
Query: 246 TGMKES 251
T +++S
Sbjct: 217 TYIEKS 222
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 125 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 160
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGAKGDSF 183
+++AL+Y H++GI+ RD+KP N+++D+ + EFY P Y +R ++
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---- 189
Query: 184 FIISGGQVKV---DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
G ++ V D+ +S + GC F G P + HD+ V
Sbjct: 190 -YFKGPELLVDLQDYDYSLDMWSLGC---MFAGMIFRKEPFFYGHDNHDQLV 237
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 24/27 (88%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDN 59
+++AL+Y H++GI+ RD+KP N+++D+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH 160
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 86/199 (43%), Gaps = 51/199 (25%)
Query: 57 LDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASF 116
L+++ VKL + +++T +++ +++E C G ++T+L E + NA
Sbjct: 64 LNHKNIVKLFAIEEET----------TTRHKVLIMEFCPCGSLYTVLEEPS----NAYGL 109
Query: 117 ITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIRE 176
+ + + V+ + +L GIV R++KP N++ +I
Sbjct: 110 PESEFL----IVLRDVVGGMNHLRENGIVHRNIKPGNIM----------------RVI-- 147
Query: 177 GAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEI----IKNRGHDR-- 230
G G S + ++ DFG ++ L + GT EY+ P++ + + H +
Sbjct: 148 GEDGQSVYKLT------DFGAAREL-EDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKY 200
Query: 231 --AVDYWALGILMHELLTG 247
VD W++G+ + TG
Sbjct: 201 GATVDLWSIGVTFYHAATG 219
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 1 MLLEACLGGEVWTILRERT-CFDDNAASFITAC--VIEALEYLHTRGIVFRDLKPENLL 56
+++E C G ++T+L E + + + F+ V+ + +L GIV R++KP N++
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 118 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 154
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 155 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 209
Query: 246 TGMKES 251
T +++S
Sbjct: 210 TYIEKS 215
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 118 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 153
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 35/139 (25%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
+I+ +D I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 103 MIKLID-IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG--------------- 146
Query: 181 DSFFIISGGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYW 235
DFG + SG + G+ ++APE+I+ + + D +
Sbjct: 147 -------------DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 193
Query: 236 ALGILMHELLTG-MKESNV 253
A GI+++EL+TG + SN+
Sbjct: 194 AFGIVLYELMTGQLPYSNI 212
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 145
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 34/132 (25%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
+I+ +D I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 130 MIKLID-IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG--------------- 173
Query: 181 DSFFIISGGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYW 235
DFG + SG + G+ ++APE+I+ + + D +
Sbjct: 174 -------------DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 220
Query: 236 ALGILMHELLTG 247
A GI+++EL+TG
Sbjct: 221 AFGIVLYELMTG 232
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 136 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 172
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 156
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 157 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 246 TGMKES 251
T +++S
Sbjct: 212 TYIEKS 217
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 155
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 156
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 157 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 246 TGMKES 251
T +++S
Sbjct: 212 TYIEKS 217
Score = 30.8 bits (68), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 155
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 35/139 (25%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
+I+ +D I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 103 MIKLID-IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG--------------- 146
Query: 181 DSFFIISGGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYW 235
DFG + SG + G+ ++APE+I+ + + D +
Sbjct: 147 -------------DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 193
Query: 236 ALGILMHELLTG-MKESNV 253
A GI+++EL+TG + SN+
Sbjct: 194 AFGIVLYELMTGQLPYSNI 212
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 145
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 127 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 163
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 164 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 218
Query: 246 TGMKES 251
T +++S
Sbjct: 219 TYIEKS 224
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 127 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 162
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 35/139 (25%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
+I+ +D I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 105 MIKLID-IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG--------------- 148
Query: 181 DSFFIISGGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYW 235
DFG + SG + G+ ++APE+I+ + + D +
Sbjct: 149 -------------DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 195
Query: 236 ALGILMHELLTG-MKESNV 253
A GI+++EL+TG + SN+
Sbjct: 196 AFGIVLYELMTGQLPYSNI 214
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 111 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 147
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 35/139 (25%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
+I+ +D I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 108 MIKLID-IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG--------------- 151
Query: 181 DSFFIISGGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYW 235
DFG + SG + G+ ++APE+I+ + + D +
Sbjct: 152 -------------DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 198
Query: 236 ALGILMHELLTG-MKESNV 253
A GI+++EL+TG + SN+
Sbjct: 199 AFGIVLYELMTGQLPYSNI 217
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 150
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 34/132 (25%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
+I+ +D I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 131 MIKLID-IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG--------------- 174
Query: 181 DSFFIISGGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYW 235
DFG + SG + G+ ++APE+I+ + + D +
Sbjct: 175 -------------DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 221
Query: 236 ALGILMHELLTG 247
A GI+++EL+TG
Sbjct: 222 AFGIVLYELMTG 233
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 173
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 18 RTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
R D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 125 RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 173
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 174 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 126 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 162
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 163 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 217
Query: 246 TGMKES 251
T +++S
Sbjct: 218 TYIEKS 223
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 126 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 161
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 35/139 (25%)
Query: 121 VIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKG 180
+I+ +D I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 108 MIKLID-IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG--------------- 151
Query: 181 DSFFIISGGQVKVDFGFSKHLGH-SGCKTW-TFCGTPEYVAPEIIKNRGHDR---AVDYW 235
DFG + SG + G+ ++APE+I+ + + D +
Sbjct: 152 -------------DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY 198
Query: 236 ALGILMHELLTG-MKESNV 253
A GI+++EL+TG + SN+
Sbjct: 199 AFGIVLYELMTGQLPYSNI 217
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I + ++YLH + I+ RDLK N+ L VK+
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 150
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDF--ITACVIE---ALEYLHT 141
+Y+++E G + LR R + I E + F + +C + +EYL +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 142 RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
+ + RDL N+L+ +K+ DFG ++ +
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKI----------------------------ADFGLARDI 207
Query: 202 GHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVS 67
+++ L + H+R ++ RDLKP+NLL++ G +KL +
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLAN 144
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+++ L + H+R ++ RDLKP+NLL++ G +KL
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKL 142
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 159
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 160 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
Query: 246 TGMKES 251
T +++S
Sbjct: 215 TYIEKS 220
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 158
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 174
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 175 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
Query: 246 TGMKES 251
T +++S
Sbjct: 230 TYIEKS 235
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 173
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 41/166 (24%)
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
SK V ++ E G + T L++ N F ++ L I+A ++YL G
Sbjct: 95 SKPVMIVTEYMENGSLDTFLKK------NDGQFTVIQLVGMLRGISA----GMKYLSDMG 144
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
V RDL N+L+++ K+ DFG S+ L
Sbjct: 145 YVHRDLAARNILINSNLVCKVS----------------------------DFGLSRVLED 176
Query: 204 SGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+T G + APE I R A D W+ GI+M E+++
Sbjct: 177 DPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 173
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 174 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 35/128 (27%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 156
Query: 189 GQVKVDFGFSKHLGHSGCKTWTFCGTPE-----YVAPEIIKNRGHDRAVDYWALGILMHE 243
DFG +K L K + P + APE + A D W+ G++++E
Sbjct: 157 -----DFGLTKVLPQD--KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 209
Query: 244 LLTGMKES 251
L T +++S
Sbjct: 210 LFTYIEKS 217
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 155
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 173
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 174 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 28 FITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNR-------GYVKLEFY-PAGHYIIREGAKGDSF 183
+++AL+Y H++GI+ RD+KP N+++D+ + EFY P Y +R ++
Sbjct: 155 LLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR---- 210
Query: 184 FIISGGQVKV---DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAV 232
G ++ V D+ +S + GC F G P + HD+ V
Sbjct: 211 -YFKGPELLVDLQDYDYSLDMWSLGC---MFAGMIFRKEPFFYGHDNHDQLV 258
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 24/27 (88%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDN 59
+++AL+Y H++GI+ RD+KP N+++D+
Sbjct: 155 LLKALDYCHSQGIMHRDVKPHNVMIDH 181
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 43/122 (35%), Gaps = 39/122 (31%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V ++YL + V R+L N+LL NR Y K+
Sbjct: 445 VSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKIS-------------------------- 478
Query: 192 KVDFGFSKHLGHS-------GCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
DFG SK LG W ++ APE I R D W+ G+ M E
Sbjct: 479 --DFGLSKALGADDSYYTARSAGKWPL----KWYAPECINFRKFSSRSDVWSYGVTMWEA 532
Query: 245 LT 246
L+
Sbjct: 533 LS 534
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V ++YL + V R+L N+LL NR Y K+
Sbjct: 445 VSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKI 477
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 173
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 174 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 31/126 (24%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG----------------------- 174
Query: 189 GQVKVDFGFSKHLGHSG--CKTWTFCGTPEY-VAPEIIKNRGHDRAVDYWALGILMHELL 245
DFG +K L K +P + APE + A D W+ G++++EL
Sbjct: 175 -----DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
Query: 246 TGMKES 251
T +++S
Sbjct: 230 TYIEKS 235
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + RDL N+L++N VK+
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI 173
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 173
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 174 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 173
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 174 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 173
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 174 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 173
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 174 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 140 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 178
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 179 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 231
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 135 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 171
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 173
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 174 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 67/186 (36%), Gaps = 56/186 (30%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-NAASFITACVIEALDFITACVIE 134
RLY +Y+YM++E C ++ + L+++ D S+ ++E
Sbjct: 120 RLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN------------MLE 166
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
A+ +H GIV DLKP N F I+ G +D
Sbjct: 167 AVHTIHQHGIVHSDLKPAN-----------------------------FLIVDGMLKLID 197
Query: 195 FGFSKHLGHSGCKTW--TFCGTPEYVAPEIIKNRGHDR-----------AVDYWALGILM 241
FG + + + G Y+ PE IK+ R D W+LG ++
Sbjct: 198 FGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
Query: 242 HELLTG 247
+ + G
Sbjct: 258 YYMTYG 263
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
M++E C ++ + L+++ D ++EA+ +H GIV DLKP N L+ +
Sbjct: 133 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD- 190
Query: 61 GYVKLV 66
G +KL+
Sbjct: 191 GMLKLI 196
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 173
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 174 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 134 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 172
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 173 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 225
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 129 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 165
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 134 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 172
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 173 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 225
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 129 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 165
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 34/115 (29%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
L YLHTR I+ RD+K N+LLD K+ D
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKI----------------------------TD 182
Query: 195 FGFSK---HLGHSGCKTWTFCGTPEYVAPE-IIKNRGHDRAVDYWALGILMHELL 245
FG SK LG + GT Y+ PE IK R +++ D ++ G+++ E+L
Sbjct: 183 FGISKKGTELGQTHLXX-VVKGTLGYIDPEYFIKGRLTEKS-DVYSFGVVLFEVL 235
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKT 80
L YLHTR I+ RD+K N+LLD K+ + T L +T
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQT 195
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 127 FITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
F +++AL+Y H+ GI+ RD+KP N+++D+ + KL
Sbjct: 133 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRL-------------------- 171
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELL 245
+D+G ++ H G + + + PE++ + + +D ++D W+LG ++ ++
Sbjct: 172 ------IDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 224
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 23 DNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDN 59
D F +++AL+Y H+ GI+ RD+KP N+++D+
Sbjct: 128 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 164
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+++ L + H+R ++ RDLKP+NLL++ G +KL
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLA 143
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 164
+++ L + H+R ++ RDLKP+NLL++ G +KL
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKL 142
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 34/168 (20%)
Query: 80 TFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYL 139
+F++ VY++ E + ++ ++ + DD+ FI + A++ L
Sbjct: 82 SFENFNEVYIIQE-LMQTDLHRVISTQMLSDDHIQYFIYQ------------TLRAVKVL 128
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKL-EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFS 198
H ++ RDLKP NLL+++ +K+ +F A II E A +S G
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR--IIDESAADNS----------EPTGQQ 176
Query: 199 KHLGHSGCKTWTFCGTPEYVAPEI-IKNRGHDRAVDYWALGILMHELL 245
+ W Y APE+ + + + RA+D W+ G ++ EL
Sbjct: 177 SGMTEXVATRW-------YRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 2 LLEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 61
+++ + ++ ++ + DD+ FI + A++ LH ++ RDLKP NLL+++
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQ-TLRAVKVLHGSNVIHRDLKPSNLLINSNC 149
Query: 62 YVKL 65
+K+
Sbjct: 150 DLKV 153
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDF--ITACVIE---ALEYLHT 141
+Y+++E G + LR R + I E + F + +C + +EYL +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 142 RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
+ + RDL N+L+ +K+ DFG ++ +
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKI----------------------------ADFGLARDI 207
Query: 202 GHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 34/138 (24%)
Query: 115 SFITACVIEALDFITACVIE---ALEYLHTRGIVFRDLKPENLLLDNR-GYVKLEFYPAG 170
SFI + ++ I+ + + A+ ++H+ GI RD+KP+NLL++++ +KL
Sbjct: 130 SFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKL------ 183
Query: 171 HYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRG-HD 229
DFG +K L S C Y APE++ +
Sbjct: 184 ----------------------CDFGSAKKLIPSEPSVAXICSR-FYRAPELMLGATEYT 220
Query: 230 RAVDYWALGILMHELLTG 247
++D W++G + EL+ G
Sbjct: 221 PSIDLWSIGCVFGELILG 238
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 13 TILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNR 60
+ +R N S + A+ ++H+ GI RD+KP+NLL++++
Sbjct: 130 SFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSK 177
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 35/123 (28%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
++ + + +EYL +R V RDL N+L+++ +VK+
Sbjct: 117 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKI------------------------ 152
Query: 189 GQVKVDFGFSKHLGHSGCKTWTFCGTPE-----YVAPEIIKNRGHDRAVDYWALGILMHE 243
DFG +K L K P + APE + + R D W+ G++++E
Sbjct: 153 ----ADFGLAKLLPLD--KDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 206
Query: 244 LLT 246
L T
Sbjct: 207 LFT 209
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 14 ILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ R R D + ++ + + +EYL +R V RDL N+L+++ +VK+
Sbjct: 101 LQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA 153
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 47/171 (27%)
Query: 87 VYMLLEACLGGEVWTILRER----TCFDDNAASFITACVIEALDFITACVIEALEYLHTR 142
+ +++E C G + T LR + + D F+T +E L + V + +E+L +R
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT---LEHLICYSFQVAKGMEFLASR 163
Query: 143 GIVFRDLKPENLLLDNRGYVKL-------EFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ RDL N+LL + VK+ + Y Y+ KGD+ +
Sbjct: 164 KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV----RKGDARLPL--------- 210
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 211 --------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 1 MLLEACLGGEVWTILRER----TCFDDNAASFIT----AC----VIEALEYLHTRGIVFR 48
+++E C G + T LR + + D F+T C V + +E+L +R + R
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHR 168
Query: 49 DLKPENLLLDNRGYVKL 65
DL N+LL + VK+
Sbjct: 169 DLAARNILLSEKNVVKI 185
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 31/112 (27%)
Query: 138 YLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV-DFG 196
+L + + RD+KP N+L++ + G +K+ DFG
Sbjct: 146 HLPSVNVCHRDIKPHNVLVNE----------------------------ADGTLKLCDFG 177
Query: 197 FSKHLGHSGCKTWTFCGTPEYVAPEII-KNRGHDRAVDYWALGILMHELLTG 247
+K L S C Y APE+I N+ + AVD W++G + E++ G
Sbjct: 178 SAKKLSPSEPNVAYICSR-YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 31/164 (18%)
Query: 87 VYMLLEACLGGEVWTILRERT-CFDDNAASFITACVIEALDFI--TACVIEALEYLHTRG 143
V ++ E C G++ LR ++ + + A I + D + ++ V + + +L ++
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN 184
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG-GQVKVDFGFSKHLG 202
+ RD+ N+LL N K+ G + + DS +I+ G ++ V
Sbjct: 185 CIHRDVAARNVLLTNGHVAKI-----GDFGLARDIMNDSNYIVKGNARLPV--------- 230
Query: 203 HSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I + + D W+ GIL+ E+ +
Sbjct: 231 -------------KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 42/115 (36%), Gaps = 31/115 (26%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YL G V RDL N+L+D+ K+ D
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVS----------------------------D 194
Query: 195 FGFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
FG S+ L +T G + APE I R A D W+ G++M E+L
Sbjct: 195 FGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 35/128 (27%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T+ + + +EYL T+ + R+L N+L++N VK+
Sbjct: 121 TSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIG----------------------- 157
Query: 189 GQVKVDFGFSKHLGHSGCKTWTFCGTPE-----YVAPEIIKNRGHDRAVDYWALGILMHE 243
DFG +K L K + P + APE + A D W+ G++++E
Sbjct: 158 -----DFGLTKVLPQD--KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 210
Query: 244 LLTGMKES 251
L T +++S
Sbjct: 211 LFTYIEKS 218
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 30 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
T+ + + +EYL T+ + R+L N+L++N VK+
Sbjct: 121 TSQICKGMEYLGTKRYIHRNLATRNILVENENRVKI 156
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 29/182 (15%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
R Y + +++Y+ LE C + ++ + D+N I L I + V
Sbjct: 91 RYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV--- 146
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+LH+ I+ RDLKP+N+L+ + + + ++ I+ DF
Sbjct: 147 -AHLHSLKIIHRDLKPQNILVST----------SSRFTADQQTGAENLRILIS-----DF 190
Query: 196 GFSKHLGHSGCKTW-----TFCGTPEYVAPEIIK---NRGHDRAVDYWALGILMHELLTG 247
G K L SG + GT + APE+++ R R++D +++G + + +L+
Sbjct: 191 GLCKKLD-SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
Query: 248 MK 249
K
Sbjct: 250 GK 251
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLL 57
+ + +LH+ I+ RDLKP+N+L+
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILV 166
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 29/182 (15%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
R Y + +++Y+ LE C + ++ + D+N I L I + V
Sbjct: 91 RYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV--- 146
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+LH+ I+ RDLKP+N+L+ + + + ++ I+ DF
Sbjct: 147 -AHLHSLKIIHRDLKPQNILVST----------SSRFTADQQTGAENLRILIS-----DF 190
Query: 196 GFSKHLGHSGCKTW-----TFCGTPEYVAPEIIK---NRGHDRAVDYWALGILMHELLTG 247
G K L SG + GT + APE+++ R R++D +++G + + +L+
Sbjct: 191 GLCKKLD-SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
Query: 248 MK 249
K
Sbjct: 250 GK 251
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLL 57
+ + +LH+ I+ RDLKP+N+L+
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILV 166
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 35/126 (27%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
I + ++YLH + I+ RD+K N+ F+
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNI-----------------------------FLHE 167
Query: 188 GGQVKV-DFGFS--KHLGHSGCKTWTFCGTPEYVAPEIIK---NRGHDRAVDYWALGILM 241
G VK+ DFG + K + G+ ++APE+I+ N D ++ GI++
Sbjct: 168 GLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVL 227
Query: 242 HELLTG 247
+EL+TG
Sbjct: 228 YELMTG 233
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
I + ++YLH + I+ RD+K N+ L VK+
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKI 173
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 138 YLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGF 197
++H GI+ RDLKP N LL+ VK+ + I E I++ + + G
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTN----IVNDLEENEEPG- 198
Query: 198 SKHLGHSGCKTWTFCGTPEYVAPE-IIKNRGHDRAVDYWALGILMHELLTGMK 249
H + + + T Y APE I+ + +++D W+ G + ELL ++
Sbjct: 199 -PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 39 YLHTRGIVFRDLKPENLLLDNRGYVKL 65
++H GI+ RDLKP N LL+ VK+
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVKV 170
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 25/115 (21%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + YL G V RDL N+L+++ K+ + I + ++ + +GG++
Sbjct: 154 IAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDP---EAVYTTTGGKI 210
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
V WT APE I+ R A D W+ GI+M E+++
Sbjct: 211 PV--------------RWT--------APEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 75/199 (37%), Gaps = 36/199 (18%)
Query: 48 RDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERT 107
R+ P +L +++ + RL + +Y+++E GG+ T LR
Sbjct: 148 RETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--- 204
Query: 108 CFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFY 167
A +++ + A +EYL ++ + RDL N L+ + +K+ +
Sbjct: 205 ---TEGARLRVKTLLQMVGDAAA----GMEYLESKCCIHRDLAARNCLVTEKNVLKISDF 257
Query: 168 PAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRG 227
+ RE A D + SGG +V WT APE +
Sbjct: 258 ----GMSREEA--DGVYAASGGLRQVPV------------KWT--------APEALNYGR 291
Query: 228 HDRAVDYWALGILMHELLT 246
+ D W+ GIL+ E +
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 159
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLVCKVS----------------------------DF 191
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G S+ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 130
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVS----------------------------DF 162
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G S+ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 163 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDF--ITACVIE---ALEYLHT 141
+Y+++E G + LR R + I E + F + +C + +EYL +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 142 RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
+ + RDL N+L+ +K+ DFG ++ +
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKI----------------------------ADFGLARDI 207
Query: 202 GHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDF--ITACVIE---ALEYLHT 141
+Y+++E G + LR R + I E + F + +C + +EYL +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 142 RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
+ + RDL N+L+ +K+ DFG ++ +
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKI----------------------------ADFGLARDI 207
Query: 202 GHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDF--ITACVIE---ALEYLHT 141
+Y+++E G + LR R + I E + F + +C + +EYL +
Sbjct: 105 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 164
Query: 142 RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
+ + RDL N+L+ +K+ DFG ++ +
Sbjct: 165 QKCIHRDLAARNVLVTENNVMKI----------------------------ADFGLARDI 196
Query: 202 GHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDF--ITACVIE---ALEYLHT 141
+Y+++E G + LR R + I E + F + +C + +EYL +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 142 RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
+ + RDL N+L+ +K+ DFG ++ +
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKI----------------------------ADFGLARDI 207
Query: 202 GHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 33/165 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFI----TACVIEALDFITACVIEALEYLHTR 142
V ++ E C G++ LR ++ + +F TA + L F ++ V + + +L ++
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF-SSQVAQGMAFLASK 183
Query: 143 GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG-GQVKVDFGFSKHL 201
+ RD+ N+LL N K+ G + + DS +I+ G ++ V
Sbjct: 184 NCIHRDVAARNVLLTNGHVAKI-----GDFGLARDIMNDSNYIVKGNARLPV-------- 230
Query: 202 GHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I + + D W+ GIL+ E+ +
Sbjct: 231 --------------KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDF--ITACVIE---ALEYLHT 141
+Y+++E G + LR R + I E + F + +C + +EYL +
Sbjct: 108 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 167
Query: 142 RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
+ + RDL N+L+ +K+ DFG ++ +
Sbjct: 168 QKCIHRDLAARNVLVTENNVMKI----------------------------ADFGLARDI 199
Query: 202 GHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDF--ITACVIE---ALEYLHT 141
+Y+++E G + LR R + I E + F + +C + +EYL +
Sbjct: 103 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 162
Query: 142 RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
+ + RDL N+L+ +K+ DFG ++ +
Sbjct: 163 QKCIHRDLTARNVLVTENNVMKI----------------------------ADFGLARDI 194
Query: 202 GHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 35/171 (20%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 159
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ + G + + ++ + GG++ +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD---PEAAYTTRGGKIPI-- 214
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
WT +PE I R A D W+ GI++ E+++
Sbjct: 215 ------------RWT--------SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDF--ITACVIE---ALEYLHT 141
+Y+++E G + LR R + I E + F + +C + +EYL +
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221
Query: 142 RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
+ + RDL N+L+ +K+ DFG ++ +
Sbjct: 222 QKCIHRDLAARNVLVTENNVMKI----------------------------ADFGLARDI 253
Query: 202 GHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 78/196 (39%), Gaps = 55/196 (28%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
++ +SR +LY + V +++E GG ++ +L A
Sbjct: 52 LRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLH-------GAEPLPYYTAA 102
Query: 123 EALDFITACVIEALEYLHT---RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAK 179
A+ + C + + YLH+ + ++ RDLKP NLLL
Sbjct: 103 HAMSWCLQCS-QGVAYLHSMQPKALIHRDLKPPNLLL----------------------- 138
Query: 180 GDSFFIISGGQV-KV-DFGFSKHLGHSGCKTWTFC----GTPEYVAPEIIKNRGHDRAVD 233
++GG V K+ DFG + C T G+ ++APE+ + + D
Sbjct: 139 ------VAGGTVLKICDFG-------TACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 234 YWALGILMHELLTGMK 249
++ GI++ E++T K
Sbjct: 186 VFSWGIILWEVITRRK 201
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 19/130 (14%)
Query: 1 MLLEACLGGEVWTILRERTCFDD-NAASFITACV--IEALEYLHT---RGIVFRDLKPEN 54
+++E GG ++ +L AA ++ C+ + + YLH+ + ++ RDLKP N
Sbjct: 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 55 LLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGE-------------VWT 101
LLL G V + + + T +M E G +W
Sbjct: 136 LLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWE 195
Query: 102 ILRERTCFDD 111
++ R FD+
Sbjct: 196 VITRRKPFDE 205
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 78/196 (39%), Gaps = 55/196 (28%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
++ +SR +LY + V +++E GG ++ +L A
Sbjct: 53 LRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLH-------GAEPLPYYTAA 103
Query: 123 EALDFITACVIEALEYLHT---RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAK 179
A+ + C + + YLH+ + ++ RDLKP NLLL
Sbjct: 104 HAMSWCLQCS-QGVAYLHSMQPKALIHRDLKPPNLLL----------------------- 139
Query: 180 GDSFFIISGGQV-KV-DFGFSKHLGHSGCKTWTFC----GTPEYVAPEIIKNRGHDRAVD 233
++GG V K+ DFG + C T G+ ++APE+ + + D
Sbjct: 140 ------VAGGTVLKICDFG-------TACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 234 YWALGILMHELLTGMK 249
++ GI++ E++T K
Sbjct: 187 VFSWGIILWEVITRRK 202
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 19/130 (14%)
Query: 1 MLLEACLGGEVWTILRERTCFDD-NAASFITACV--IEALEYLHT---RGIVFRDLKPEN 54
+++E GG ++ +L AA ++ C+ + + YLH+ + ++ RDLKP N
Sbjct: 77 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 55 LLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGE-------------VWT 101
LLL G V + + + T +M E G +W
Sbjct: 137 LLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWE 196
Query: 102 ILRERTCFDD 111
++ R FD+
Sbjct: 197 VITRRKPFDE 206
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 40/122 (32%)
Query: 132 VIEALEYLHTR--GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGG 189
+++ L++LHTR I+ RDLK +N+ + P G I GD
Sbjct: 138 ILKGLQFLHTRTPPIIHRDLKCDNIFITG---------PTGSVKI-----GD-------- 175
Query: 190 QVKVDFGFSKHLGHSGCKTWTFC----GTPEYVAPEIIKNRGHDRAVDYWALGILMHELL 245
LG + K +F GTPE+ APE + + +D +VD +A G E
Sbjct: 176 -----------LGLATLKRASFAKAVIGTPEFXAPEXYEEK-YDESVDVYAFGXCXLEXA 223
Query: 246 TG 247
T
Sbjct: 224 TS 225
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDF--ITACVIE---ALEYLHT 141
+Y+++E G + LR R + I E + F + +C + +EYL +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 142 RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
+ + RDL N+L+ +K+ DFG ++ +
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKI----------------------------ADFGLARDI 207
Query: 202 GHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 159
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVS----------------------------DF 191
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G S+ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 159
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLVCKVS----------------------------DF 191
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G S+ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 41/174 (23%)
Query: 82 KDSKYVYMLLEACLGGEVWTILR-ERTCF-----DDNAASFITACVIEALDFITACVIEA 135
K + +++E C G + T LR +R F +D F+T +E L + V +
Sbjct: 104 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLT---LEHLIXYSFQVAKG 160
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG---AKGDSFFIISGGQVK 192
+E+L +R + RDL N+LL + VK+ + I ++ KGD+ +
Sbjct: 161 MEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL------ 214
Query: 193 VDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 215 -----------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKI 189
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 147
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLVCKVS----------------------------DF 179
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G S+ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 180 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V +EYL ++ + RDL N+L+ +K+
Sbjct: 159 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKI--------------------------- 191
Query: 192 KVDFGFSKHLGHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG ++ + H T G +++APE + +R + D W+ G+L+ E+ T
Sbjct: 192 -ADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 130
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVS----------------------------DF 162
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G S+ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 163 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 59/168 (35%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y+++E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 90 YIIIEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 140
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
DL N L+ VK+ DFG S+ +
Sbjct: 141 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 172
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 173 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 159
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVS----------------------------DF 191
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G S+ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 159
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVS----------------------------DF 191
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G S+ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 159
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVS----------------------------DF 191
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G S+ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 157
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLVCKVS----------------------------DF 189
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G S+ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 190 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 159
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVS----------------------------DF 191
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G S+ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDF--ITACVIE---ALEYLHT 141
+Y+++E G + LR R + I E + F + +C + +EYL +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 142 RGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
+ + RDL N+L+ +++ DFG ++ +
Sbjct: 176 QKCIHRDLAARNVLVTENNVMRI----------------------------ADFGLARDI 207
Query: 202 GHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 43/176 (24%)
Query: 82 KDSKYVYMLLEACLGGEVWTILRER--------TCFDDNAASFITACVIEALDFITACVI 133
K + +++E C G + T LR + +D F+T +E L + V
Sbjct: 93 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT---LEHLICYSFQVA 149
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG---AKGDSFFIISGGQ 190
+ +E+L +R + RDL N+LL + VK+ + I ++ KGD+ +
Sbjct: 150 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL---- 205
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 206 -------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 41/115 (35%), Gaps = 31/115 (26%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+ YL G V RDL N+L+D+ K+ D
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVS----------------------------D 194
Query: 195 FGFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
FG S+ L T G + APE I R A D W+ G++M E+L
Sbjct: 195 FGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 43/176 (24%)
Query: 82 KDSKYVYMLLEACLGGEVWTILRER--------TCFDDNAASFITACVIEALDFITACVI 133
K + +++E C G + T LR + +D F+T +E L + V
Sbjct: 102 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT---LEHLICYSFQVA 158
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG---AKGDSFFIISGGQ 190
+ +E+L +R + RDL N+LL + VK+ + I ++ KGD+ +
Sbjct: 159 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL---- 214
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 215 -------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
>pdb|3H3U|A Chain A, Crystal Structure Of Crp (Camp Receptor Protein) From
Mycoba Tuberculosis
pdb|3H3U|B Chain B, Crystal Structure Of Crp (Camp Receptor Protein) From
Mycoba Tuberculosis
Length = 224
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
++ + R +F+ ++P + + ++F P GH + EG GD +II G+VK+
Sbjct: 1 MDEILARAGIFQGVEPSAIAALTKQLQPVDF-PRGHTVFAEGEPGDRLYIIISGKVKI 57
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 60/168 (35%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y+++E G + LRE C ++ + L ++ + A+EYL + + R
Sbjct: 85 YIIIEFMTYGNLLDYLRE--CNRQEVSAVV-------LLYMATQISSAMEYLEKKNFIHR 135
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
DL N L+ VK+ DFG S+ +
Sbjct: 136 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 167
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 168 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3I59|A Chain A, Crystal Structure Of Mtbcrp In Complex With N6-Camp
Length = 249
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
++ + R +F+ ++P + + ++F P GH + EG GD +II G+VK+
Sbjct: 26 MDEILARAGIFQGVEPSAIAALTKQLQPVDF-PRGHTVFAEGEPGDRLYIIISGKVKI 82
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 42/175 (24%)
Query: 82 KDSKYVYMLLEACLGGEVWTILRER-------TCFDDNAASFITACVIEALDFITACVIE 134
K + +++E C G + T LR + +D F+T +E L + V +
Sbjct: 103 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT---LEHLICYSFQVAK 159
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG---AKGDSFFIISGGQV 191
+E+L +R + RDL N+LL + VK+ + I ++ KGD+ +
Sbjct: 160 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL----- 214
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 215 ------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
>pdb|3MZH|A Chain A, Crystal Structure Of Camp Receptor Protein From
Mycobacterium Tuberculosis In Complex With Camp And Its
Dna Binding Element
pdb|3MZH|B Chain B, Crystal Structure Of Camp Receptor Protein From
Mycobacterium Tuberculosis In Complex With Camp And Its
Dna Binding Element
Length = 225
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
++ + R +F+ ++P + + ++F P GH + EG GD +II G+VK+
Sbjct: 2 MDEILARAGIFQGVEPSAIAALTKQLQPVDF-PRGHTVFAEGEPGDRLYIIISGKVKI 58
>pdb|3I54|A Chain A, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|B Chain B, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|C Chain C, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|D Chain D, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I59|B Chain B, Crystal Structure Of Mtbcrp In Complex With N6-Camp
Length = 249
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
++ + R +F+ ++P + + ++F P GH + EG GD +II G+VK+
Sbjct: 26 MDEILARAGIFQGVEPSAIAALTKQLQPVDF-PRGHTVFAEGEPGDRLYIIISGKVKI 82
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 66/184 (35%), Gaps = 61/184 (33%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y+++E G + LRE C ++ + L ++ + A+EYL + + R
Sbjct: 83 YIIIEFMTYGNLLDYLRE--CNRQEVSAVV-------LLYMATQISSAMEYLEKKNFIHR 133
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL------ 201
DL N L+ VK+ DFG S+ +
Sbjct: 134 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTXT 165
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT-------GMKES 251
H+G K WT APE + D WA G+L+ E+ T G+ S
Sbjct: 166 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
Query: 252 NVFQ 255
V++
Sbjct: 218 QVYE 221
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 60/168 (35%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y+++E G + LRE C ++ + L ++ + A+EYL + + R
Sbjct: 85 YIIIEFMTYGNLLDYLRE--CNRQEVSAVV-------LLYMATQISSAMEYLEKKNFIHR 135
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
DL N L+ VK+ DFG S+ +
Sbjct: 136 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 167
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 168 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 51/180 (28%)
Query: 82 KDSKYVYMLLEACLGGEVWTILRER--------TCFDDNAASFITACVIEALDFITACVI 133
K + +++E C G + T LR + +D F+T +E L + V
Sbjct: 139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT---LEHLICYSFQVA 195
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKL-------EFYPAGHYIIREGAKGDSFFII 186
+ +E+L +R + RDL N+LL + VK+ + Y Y+ KGD+ +
Sbjct: 196 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV----RKGDARLPL 251
Query: 187 SGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 252 -----------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 194 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 226
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 50/139 (35%), Gaps = 48/139 (34%)
Query: 117 ITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIRE 176
+TA V L ++ + A+EYL + + RDL N L+ VK+
Sbjct: 127 VTAVV---LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKV------------ 171
Query: 177 GAKGDSFFIISGGQVKVDFGFSK------HLGHSGCK---TWTFCGTPEYVAPEIIKNRG 227
DFG S+ + H+G K WT APE +
Sbjct: 172 ----------------ADFGLSRLMTGDTYTAHAGAKFPIKWT--------APESLAYNT 207
Query: 228 HDRAVDYWALGILMHELLT 246
D WA G+L+ E+ T
Sbjct: 208 FSIKSDVWAFGVLLWEIAT 226
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 34/115 (29%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
L YLHTR I+ RD+K N+LLD K+ D
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKI----------------------------TD 182
Query: 195 FGFSKHLGHSGCKT---WTFCGTPEYVAPE-IIKNRGHDRAVDYWALGILMHELL 245
FG SK G +T GT Y+ PE IK R +++ D ++ G+++ E+L
Sbjct: 183 FGISKK-GTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKS-DVYSFGVVLFEVL 235
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 36 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKT 80
L YLHTR I+ RD+K N+LLD K+ + T L +T
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT 195
>pdb|3D0S|A Chain A, Camp Receptor Protein From M.Tuberculosis, Camp-Free Form
pdb|3D0S|B Chain B, Camp Receptor Protein From M.Tuberculosis, Camp-Free Form
pdb|4A2U|A Chain A, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|B Chain B, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|C Chain C, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|D Chain D, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|E Chain E, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|F Chain F, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|G Chain G, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|H Chain H, Crp(Cap) From Myco. Tuberculosis, With Camp
Length = 227
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
++ + R +F+ ++P + + ++F P GH + EG GD +II G+VK+
Sbjct: 4 MDEILARAGIFQGVEPSAIAALTKQLQPVDF-PRGHTVFAEGEPGDRLYIIISGKVKI 60
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 33/186 (17%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
R Y + +++Y+ LE C + ++ + D+N I L I + V
Sbjct: 73 RYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV--- 128
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+LH+ I+ RDLKP+N+L+ + + + ++ I+ DF
Sbjct: 129 -AHLHSLKIIHRDLKPQNILVST----------SSRFTADQQTGAENLRILIS-----DF 172
Query: 196 GFSKHLGHSGCKTW-----TFCGTPEYVAPEIIK-------NRGHDRAVDYWALGILMHE 243
G K L SG + GT + APE+++ R R++D +++G + +
Sbjct: 173 GLCKKLD-SGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY 231
Query: 244 LLTGMK 249
+L+ K
Sbjct: 232 ILSKGK 237
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLL 57
+ + +LH+ I+ RDLKP+N+L+
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILV 148
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 59/168 (35%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y+++E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 86 YIIIEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 136
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL------ 201
DL N L+ VK+ DFG S+ +
Sbjct: 137 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTXT 168
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 169 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 74/199 (37%), Gaps = 36/199 (18%)
Query: 48 RDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERT 107
R+ P +L +++ + RL + +Y+++E GG+ T LR
Sbjct: 148 RETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--- 204
Query: 108 CFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFY 167
A +++ + A +EYL ++ + RDL N L+ + +K+ +
Sbjct: 205 ---TEGARLRVKTLLQMVGDAAA----GMEYLESKCCIHRDLAARNCLVTEKNVLKISDF 257
Query: 168 PAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRG 227
+ RE A D SGG +V WT APE +
Sbjct: 258 ----GMSREEA--DGVXAASGGLRQVPV------------KWT--------APEALNYGR 291
Query: 228 HDRAVDYWALGILMHELLT 246
+ D W+ GIL+ E +
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 43/176 (24%)
Query: 82 KDSKYVYMLLEACLGGEVWTILRER--------TCFDDNAASFITACVIEALDFITACVI 133
K + +++E C G + T LR + +D F+T +E L + V
Sbjct: 102 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT---LEHLICYSFQVA 158
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG---AKGDSFFIISGGQ 190
+ +E+L +R + RDL N+LL + VK+ + I ++ KGD+ +
Sbjct: 159 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL---- 214
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 215 -------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
>pdb|3R6S|A Chain A, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|B Chain B, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|C Chain C, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|D Chain D, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|E Chain E, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|F Chain F, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
Length = 247
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 133 IEALEYLHTRGIVFRDLKPE--NLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQ 190
+E ++ + +R +F+ + P N L+ + V+ +P G I EG GD +II+ G+
Sbjct: 21 MEGVQEILSRAGIFQGVDPTAVNNLIQDMETVR---FPRGATIFDEGEPGDRLYIITSGK 77
Query: 191 VKV 193
VK+
Sbjct: 78 VKL 80
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 34/138 (24%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
L ++ + A+EYL + + RDL N L+ VK+ + + GD+F
Sbjct: 111 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV-----ADFGLSRLMTGDTFT 165
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+G + + WT APE + D WA G+L+ E+
Sbjct: 166 AHAGAKFPIK--------------WT--------APESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 245 LT-------GMKESNVFQ 255
T G+ S V++
Sbjct: 204 ATYGMSPYPGIDPSQVYE 221
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 33/116 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V EA+EYL V RDL N+L+ K+
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS-------------------------- 159
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K T P ++ APE ++ + D W+ GIL+ E+ +
Sbjct: 160 --DFGLTKE----ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 43/176 (24%)
Query: 82 KDSKYVYMLLEACLGGEVWTILRER--------TCFDDNAASFITACVIEALDFITACVI 133
K + +++E C G + T LR + +D F+T +E L + V
Sbjct: 102 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT---LEHLICYSFQVA 158
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG---AKGDSFFIISGGQ 190
+ +E+L +R + RDL N+LL + VK+ + I ++ KGD+ +
Sbjct: 159 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL---- 214
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 215 -------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 33.9 bits (76), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 33/116 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V EA+EYL V RDL N+L+ K+
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS-------------------------- 144
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K T P ++ APE ++ + D W+ GIL+ E+ +
Sbjct: 145 --DFGLTKE----ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 33/163 (20%)
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
S V ++ E G + + LR+ N F ++ L I A ++YL
Sbjct: 106 STPVMIITEFMENGSLDSFLRQ------NDGQFTVIQLVGMLRGIAA----GMKYLADMN 155
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
V RDL N+L+++ K+ + ++ + ++ GG++ +
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFL-EDDTSDPTYTSALGGKIPI---------- 204
Query: 204 SGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
WT APE I+ R A D W+ GI+M E+++
Sbjct: 205 ----RWT--------APEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V +EYL ++ + RDL N+L+ +K+
Sbjct: 151 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKI--------------------------- 183
Query: 192 KVDFGFSKHLGHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG ++ + H T G +++APE + +R + D W+ G+L+ E+ T
Sbjct: 184 -ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V +EYL ++ + RDL N+L+ +K+
Sbjct: 144 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKI--------------------------- 176
Query: 192 KVDFGFSKHLGHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG ++ + H T G +++APE + +R + D W+ G+L+ E+ T
Sbjct: 177 -ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 33/116 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V EA+EYL V RDL N+L+ K+
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS-------------------------- 331
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K T P ++ APE ++ + D W+ GIL+ E+ +
Sbjct: 332 --DFGLTKE----ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 38/129 (29%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL V RDL N+LL + Y K+ D
Sbjct: 123 GMKYLEESNFVHRDLAARNVLLVTQHYAKIS----------------------------D 154
Query: 195 FGFSKHL--GHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT----- 246
FG SK L + K T P ++ APE I D W+ G+LM E +
Sbjct: 155 FGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
Query: 247 --GMKESNV 253
GMK S V
Sbjct: 215 YRGMKGSEV 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V +EYL ++ + RDL N+L+ +K+
Sbjct: 159 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKI--------------------------- 191
Query: 192 KVDFGFSKHLGHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG ++ + H T G +++APE + +R + D W+ G+L+ E+ T
Sbjct: 192 -ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V +EYL ++ + RDL N+L+ +K+
Sbjct: 148 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKI--------------------------- 180
Query: 192 KVDFGFSKHLGHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG ++ + H T G +++APE + +R + D W+ G+L+ E+ T
Sbjct: 181 -ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 98 YIITEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 148
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
DL N L+ VK+ DFG S+ +
Sbjct: 149 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 180
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 181 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V +EYL ++ + RDL N+L+ +K+
Sbjct: 152 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKI--------------------------- 184
Query: 192 KVDFGFSKHLGHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG ++ + H T G +++APE + +R + D W+ G+L+ E+ T
Sbjct: 185 -ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V +EYL ++ + RDL N+L+ +K+
Sbjct: 159 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKI--------------------------- 191
Query: 192 KVDFGFSKHLGHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG ++ + H T G +++APE + +R + D W+ G+L+ E+ T
Sbjct: 192 -ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 85 YIITEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 135
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
DL N L+ VK+ DFG S+ +
Sbjct: 136 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 167
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 168 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 43/176 (24%)
Query: 82 KDSKYVYMLLEACLGGEVWTILRER--------TCFDDNAASFITACVIEALDFITACVI 133
K + ++ E C G + T LR + +D F+T +E L + V
Sbjct: 93 KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT---LEHLICYSFQVA 149
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG---AKGDSFFIISGGQ 190
+ +E+L +R + RDL N+LL + VK+ + I ++ KGD+ +
Sbjct: 150 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL---- 205
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 206 -------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V +EYL ++ + RDL N+L+ +K+
Sbjct: 159 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKI--------------------------- 191
Query: 192 KVDFGFSKHLGHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG ++ + H T G +++APE + +R + D W+ G+L+ E+ T
Sbjct: 192 -ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 43/176 (24%)
Query: 82 KDSKYVYMLLEACLGGEVWTILRER--------TCFDDNAASFITACVIEALDFITACVI 133
K + ++ E C G + T LR + +D F+T +E L + V
Sbjct: 93 KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT---LEHLICYSFQVA 149
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG---AKGDSFFIISGGQ 190
+ +E+L +R + RDL N+LL + VK+ + I ++ KGD+ +
Sbjct: 150 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL---- 205
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 206 -------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 90 YIITEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 140
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
DL N L+ VK+ DFG S+ +
Sbjct: 141 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 172
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 173 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 46/131 (35%), Gaps = 45/131 (34%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
L ++ + A+EYL + + RDL N L+ VK+
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV-------------------- 157
Query: 185 IISGGQVKVDFGFSK------HLGHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYW 235
DFG S+ + H+G K WT APE + D W
Sbjct: 158 --------ADFGLSRLMTGDTYTAHAGAKFPIKWT--------APESLAYNKFSIKSDVW 201
Query: 236 ALGILMHELLT 246
A G+L+ E+ T
Sbjct: 202 AFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 87 YIITEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 137
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
DL N L+ VK+ DFG S+ +
Sbjct: 138 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 169
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 170 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 46/131 (35%), Gaps = 45/131 (34%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
L ++ + A+EYL + + RDL N L+ VK+
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV-------------------- 152
Query: 185 IISGGQVKVDFGFSK------HLGHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYW 235
DFG S+ + H+G K WT APE + D W
Sbjct: 153 --------ADFGLSRLMTGDTYTAHAGAKFPIKWT--------APESLAYNKFSIKSDVW 196
Query: 236 ALGILMHELLT 246
A G+L+ E+ T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 80/218 (36%), Gaps = 55/218 (25%)
Query: 39 YLHTRGIVFRDLKPENL----LLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEAC 94
Y ++ + + LKP + L+ +K + K RLY + +Y++ E
Sbjct: 34 YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDK---LVRLYAVVTREEPIYIITEYM 90
Query: 95 LGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENL 154
G + L+ D + +I DF +A + E + Y+ + + RDL+ N+
Sbjct: 91 AKGSLLDFLK-----SDEGGKVLLPKLI---DF-SAQIAEGMAYIERKNYIHRDLRAANV 141
Query: 155 LLDNRGYVKLEFY------PAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKT 208
L+ K+ + Y REGAK F I
Sbjct: 142 LVSESLMCKIADFGLARVIEDNEYTAREGAK----FPIK--------------------- 176
Query: 209 WTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
WT APE I D W+ GIL++E++T
Sbjct: 177 WT--------APEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 33.9 bits (76), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V +EYL ++ + RDL N+L+ +K+
Sbjct: 200 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKI--------------------------- 232
Query: 192 KVDFGFSKHLGHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG ++ + H T G +++APE + +R + D W+ G+L+ E+ T
Sbjct: 233 -ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 33.9 bits (76), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 52/147 (35%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
L ++ + A+EYL + + RDL N L+ VK+
Sbjct: 111 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV-------------------- 150
Query: 185 IISGGQVKVDFGFSKHL------GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYW 235
DFG S+ + H+G K WT APE + D W
Sbjct: 151 --------ADFGLSRLMTGDTXTAHAGAKFPIKWT--------APESLAYNKFSIKSDVW 194
Query: 236 ALGILMHELLT-------GMKESNVFQ 255
A G+L+ E+ T G+ S V++
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 90 YIITEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 140
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
DL N L+ VK+ DFG S+ +
Sbjct: 141 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 172
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 173 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 46/131 (35%), Gaps = 45/131 (34%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
L ++ + A+EYL + + RDL N L+ VK+
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV-------------------- 152
Query: 185 IISGGQVKVDFGFSK------HLGHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYW 235
DFG S+ + H+G K WT APE + D W
Sbjct: 153 --------ADFGLSRLMTGDTYTAHAGAKFPIKWT--------APESLAYNKFSIKSDVW 196
Query: 236 ALGILMHELLT 246
A G+L+ E+ T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 85 YIITEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 135
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
DL N L+ VK+ DFG S+ +
Sbjct: 136 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 167
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 168 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 87 YIITEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 137
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
DL N L+ VK+ DFG S+ +
Sbjct: 138 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 169
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 170 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 43/176 (24%)
Query: 82 KDSKYVYMLLEACLGGEVWTILRER--------TCFDDNAASFITACVIEALDFITACVI 133
K + +++E C G + T LR + +D F+T +E L + V
Sbjct: 104 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT---LEHLICYSFQVA 160
Query: 134 EALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREG---AKGDSFFIISGGQ 190
+ +E+L +R + RDL N+LL + VK+ + I ++ KGD+ +
Sbjct: 161 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL---- 216
Query: 191 VKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 217 -------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 159 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 191
>pdb|3DZO|A Chain A, Crystal Structure Of A Rhoptry Kinase From Toxoplasma
Gondii
Length = 413
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 83/202 (41%), Gaps = 25/202 (12%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGY 62
+E+ LG T++R ++ +++ A E E F + P N + +
Sbjct: 69 VESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEE 128
Query: 63 V---KLVSRKKKTRQTRLYKTF-------KDSKYVYMLLEACLGGEVWTILR-------- 104
V +L+ K +Q +++ F KD + M+ ++W + R
Sbjct: 129 VLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ 188
Query: 105 -ERTCFDD---NAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 160
F + + +S + V A +T VI L LH G+V L+P +++LD RG
Sbjct: 189 SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG 248
Query: 161 YVKLEFYPAGHYIIREGAKGDS 182
V L + +++R+GA S
Sbjct: 249 GVFLTGF---EHLVRDGASAVS 267
>pdb|3BYV|A Chain A, Crystal Structure Of Toxoplasma Gondii Specific Rhoptry
Antigen Kinase Domain
Length = 377
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 25/199 (12%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGY 62
+E+ LG T++R ++ +++ A E E F + P N + +
Sbjct: 64 VESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEE 123
Query: 63 V---KLVSRKKKTRQTRLYKTF-------KDSKYVYMLLEACLGGEVWTILR-------- 104
V +L+ K +Q +++ F KD + M+ ++W + R
Sbjct: 124 VLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ 183
Query: 105 -ERTCFDD---NAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 160
F + + +S + V A +T VI L LH G+V L+P +++LD RG
Sbjct: 184 SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG 243
Query: 161 YVKLEFYPAGHYIIREGAK 179
V F +++R+GA+
Sbjct: 244 GV---FLTGFEHLVRDGAR 259
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 89 YIITEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 139
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
DL N L+ VK+ DFG S+ +
Sbjct: 140 DLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 171
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 172 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 66/174 (37%), Gaps = 41/174 (23%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL SK V ++ E G + + LR+ + A F ++ L I +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRK------HDAQFTVIQLVGMLRGIAS----G 159
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
++YL G V RDL N+L+++ K+ DF
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVS----------------------------DF 191
Query: 196 GFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
G ++ L +T G + +PE I R A D W+ GI++ E+++
Sbjct: 192 GLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 51/175 (29%)
Query: 87 VYMLLEACLGGEVWTILRER--------TCFDDNAASFITACVIEALDFITACVIEALEY 138
+ ++ E C G + T LR + +D F+T +E L + V + +E+
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT---LEHLICYSFQVAKGMEF 154
Query: 139 LHTRGIVFRDLKPENLLLDNRGYVKL-------EFYPAGHYIIREGAKGDSFFIISGGQV 191
L +R + RDL N+LL + VK+ + Y Y+ KGD+ +
Sbjct: 155 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV----RKGDARLPL----- 205
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I +R + D W+ G+L+ E+ +
Sbjct: 206 ------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 30/114 (26%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
+EYL ++ + RDL N+L+ +K+ D
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKI----------------------------AD 200
Query: 195 FGFSKHLGHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
FG ++ + + T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 30/120 (25%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
T + +EYL ++ + RDL N+L+ +K+
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI------------------------ 198
Query: 189 GQVKVDFGFSKHLGHSGCKTWTFCG--TPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG ++ + + T G +++APE + +R + D W+ G+LM E+ T
Sbjct: 199 ----ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 23/115 (20%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + YL V RDL N+L+++ K+ + ++ E + ++ GG++
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL-EENSSDPTYTSSLGGKI 183
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ WT APE I R A D W+ GI+M E+++
Sbjct: 184 PI--------------RWT--------APEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 38/129 (29%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL V RDL N+LL + Y K+ D
Sbjct: 119 GMKYLEESNFVHRDLAARNVLLVTQHYAKIS----------------------------D 150
Query: 195 FGFSKHL--GHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT----- 246
FG SK L + K T P ++ APE I D W+ G+LM E +
Sbjct: 151 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
Query: 247 --GMKESNV 253
GMK S V
Sbjct: 211 YRGMKGSEV 219
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 36/126 (28%)
Query: 128 ITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
I+ ++ L+Y+H R GI+ D+KPEN+L +E + +I
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVL--------MEIVDSPENLI------------ 175
Query: 187 SGGQVKV-DFG----FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
Q+K+ D G + +H +S T EY +PE++ D W+ L+
Sbjct: 176 ---QIKIADLGNACWYDEHYTNS-------IQTREYRSPEVLLGAPWGCGADIWSTACLI 225
Query: 242 HELLTG 247
EL+TG
Sbjct: 226 FELITG 231
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 29 ITACVIEALEYLHTR-GIVFRDLKPENLLLD 58
I+ ++ L+Y+H R GI+ D+KPEN+L++
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLME 166
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 36/126 (28%)
Query: 128 ITACVIEALEYLHTR-GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFII 186
I+ ++ L+Y+H R GI+ D+KPEN+L +E + +I
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVL--------MEIVDSPENLI------------ 175
Query: 187 SGGQVKV-DFG----FSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILM 241
Q+K+ D G + +H +S T EY +PE++ D W+ L+
Sbjct: 176 ---QIKIADLGNACWYDEHYTNS-------IQTREYRSPEVLLGAPWGCGADIWSTACLI 225
Query: 242 HELLTG 247
EL+TG
Sbjct: 226 FELITG 231
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 29 ITACVIEALEYLHTR-GIVFRDLKPENLLLD 58
I+ ++ L+Y+H R GI+ D+KPEN+L++
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLME 166
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 38/129 (29%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL V RDL N+LL + Y K+ D
Sbjct: 129 GMKYLEESNFVHRDLAARNVLLVTQHYAKIS----------------------------D 160
Query: 195 FGFSKHL--GHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT----- 246
FG SK L + K T P ++ APE I D W+ G+LM E +
Sbjct: 161 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
Query: 247 --GMKESNV 253
GMK S V
Sbjct: 221 YRGMKGSEV 229
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 72/206 (34%), Gaps = 56/206 (27%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 54 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 104
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYPAGHYIIRE 176
+ LD + A + E + ++ R + RDL+ N+L+ + K+ Y RE
Sbjct: 105 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 163
Query: 177 GAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWA 236
GAK F I WT APE I D W+
Sbjct: 164 GAK----FPIK---------------------WT--------APEAINYGTFTIKSDVWS 190
Query: 237 LGILMHELLT-------GMKESNVFQ 255
GIL+ E++T GM V Q
Sbjct: 191 FGILLTEIVTHGRIPYPGMTNPEVIQ 216
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ E + YL R +V RDL N+L+ +VK+
Sbjct: 123 IAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 155
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 156 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 23 DNAAS--FITACV--IEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
DN S + CV E + YL R +V RDL N+L+ +VK+
Sbjct: 109 DNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 155
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 38/129 (29%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL V RDL N+LL + Y K+ D
Sbjct: 117 GMKYLEESNFVHRDLAARNVLLVTQHYAKIS----------------------------D 148
Query: 195 FGFSKHL--GHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT----- 246
FG SK L + K T P ++ APE I D W+ G+LM E +
Sbjct: 149 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
Query: 247 --GMKESNV 253
GMK S V
Sbjct: 209 YRGMKGSEV 217
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 38/129 (29%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL V RDL N+LL + Y K+ D
Sbjct: 123 GMKYLEESNFVHRDLAARNVLLVTQHYAKIS----------------------------D 154
Query: 195 FGFSKHL--GHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT----- 246
FG SK L + K T P ++ APE I D W+ G+LM E +
Sbjct: 155 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
Query: 247 --GMKESNV 253
GMK S V
Sbjct: 215 YRGMKGSEV 223
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 46/131 (35%), Gaps = 45/131 (34%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
L ++ + A+EYL + + RDL N L+ VK+
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV-------------------- 157
Query: 185 IISGGQVKVDFGFSKHL------GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYW 235
DFG S+ + H+G K WT APE + D W
Sbjct: 158 --------ADFGLSRLMTGDTXTAHAGAKFPIKWT--------APESLAYNKFSIKSDVW 201
Query: 236 ALGILMHELLT 246
A G+L+ E+ T
Sbjct: 202 AFGVLLWEIAT 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 41/116 (35%), Gaps = 33/116 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V EA+EYL V RDL N+L+ K+
Sbjct: 117 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS-------------------------- 150
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K T P ++ APE ++ D W+ GIL+ E+ +
Sbjct: 151 --DFGLTKE----ASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 27/122 (22%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
L ++ + A+EYL + + RDL N L+ VK+ + + GD++
Sbjct: 114 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV-----ADFGLSRLMTGDTYT 168
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+G + + WT APE + D WA G+L+ E+
Sbjct: 169 APAGAKFPI--------------KWT--------APESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 245 LT 246
T
Sbjct: 207 AT 208
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 38/129 (29%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL V RDL N+LL + Y K+ D
Sbjct: 139 GMKYLEESNFVHRDLAARNVLLVTQHYAKIS----------------------------D 170
Query: 195 FGFSKHL--GHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT----- 246
FG SK L + K T P ++ APE I D W+ G+LM E +
Sbjct: 171 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
Query: 247 --GMKESNV 253
GMK S V
Sbjct: 231 YRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 38/129 (29%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL V RDL N+LL + Y K+ D
Sbjct: 139 GMKYLEESNFVHRDLAARNVLLVTQHYAKIS----------------------------D 170
Query: 195 FGFSKHL--GHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT----- 246
FG SK L + K T P ++ APE I D W+ G+LM E +
Sbjct: 171 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
Query: 247 --GMKESNV 253
GMK S V
Sbjct: 231 YRGMKGSEV 239
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 36/159 (22%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 87 YIITEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 137
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCK 207
DL N L+ VK+ + + GD++ +G + +
Sbjct: 138 DLAARNCLVGENHLVKV-----ADFGLSRLMTGDTYTAPAGAKFPI-------------- 178
Query: 208 TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
WT APE + D WA G+L+ E+ T
Sbjct: 179 KWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 38/129 (29%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL V RDL N+LL + Y K+ D
Sbjct: 137 GMKYLEESNFVHRDLAARNVLLVTQHYAKIS----------------------------D 168
Query: 195 FGFSKHL--GHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT----- 246
FG SK L + K T P ++ APE I D W+ G+LM E +
Sbjct: 169 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
Query: 247 --GMKESNV 253
GMK S V
Sbjct: 229 YRGMKGSEV 237
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 31/115 (26%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL V RDL N+L+++ K+ D
Sbjct: 143 GMKYLSDMSAVHRDLAARNILVNSNLVCKVS----------------------------D 174
Query: 195 FGFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
FG S+ L +T G + APE I R A D W+ GI+M E+++
Sbjct: 175 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 72/206 (34%), Gaps = 56/206 (27%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 64 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 114
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYPAGHYIIRE 176
+ LD + A + E + ++ R + RDL+ N+L+ + K+ Y RE
Sbjct: 115 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 173
Query: 177 GAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWA 236
GAK F I WT APE I D W+
Sbjct: 174 GAK----FPIK---------------------WT--------APEAINYGTFTIKSDVWS 200
Query: 237 LGILMHELLT-------GMKESNVFQ 255
GIL+ E++T GM V Q
Sbjct: 201 FGILLTEIVTHGRIPYPGMTNPEVIQ 226
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 72/206 (34%), Gaps = 56/206 (27%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 115
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYPAGHYIIRE 176
+ LD + A + E + ++ R + RDL+ N+L+ + K+ Y RE
Sbjct: 116 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 174
Query: 177 GAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWA 236
GAK F I WT APE I D W+
Sbjct: 175 GAK----FPIK---------------------WT--------APEAINYGTFTIKSDVWS 201
Query: 237 LGILMHELLT-------GMKESNVFQ 255
GIL+ E++T GM V Q
Sbjct: 202 FGILLTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|4EV0|A Chain A, Crystal Structure Of Thermus Thermophilus Catabolite
Activator Protein
pdb|4EV0|D Chain D, Crystal Structure Of Thermus Thermophilus Catabolite
Activator Protein
Length = 216
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 145 VFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHS 204
+F L PE + L Y + YP G I +G G + ++++ G+V++ F HLG
Sbjct: 6 LFHGLAPEEVDL-ALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRL---FRTHLGGQ 61
Query: 205 GCKTWTFCGTPE 216
+T G E
Sbjct: 62 -ERTLALLGPGE 72
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 72/206 (34%), Gaps = 56/206 (27%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 109
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYPAGHYIIRE 176
+ LD + A + E + ++ R + RDL+ N+L+ + K+ Y RE
Sbjct: 110 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168
Query: 177 GAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWA 236
GAK F I WT APE I D W+
Sbjct: 169 GAK----FPIK---------------------WT--------APEAINYGTFTIKSDVWS 195
Query: 237 LGILMHELLT-------GMKESNVFQ 255
GIL+ E++T GM V Q
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 80/218 (36%), Gaps = 55/218 (25%)
Query: 39 YLHTRGIVFRDLKPENL----LLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEAC 94
Y ++ + + LKP + L+ +K + K RLY + +Y++ E
Sbjct: 33 YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDK---LVRLYAVVTKEEPIYIITEFM 89
Query: 95 LGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENL 154
G + L+ D + +I DF +A + E + Y+ + + RDL+ N+
Sbjct: 90 AKGSLLDFLK-----SDEGGKVLLPKLI---DF-SAQIAEGMAYIERKNYIHRDLRAANV 140
Query: 155 LLDNRGYVKLEFY------PAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKT 208
L+ K+ + Y REGAK F I
Sbjct: 141 LVSESLMCKIADFGLARVIEDNEYTAREGAK----FPIK--------------------- 175
Query: 209 WTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
WT APE I + W+ GIL++E++T
Sbjct: 176 WT--------APEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 72/206 (34%), Gaps = 56/206 (27%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 69 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 119
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL------EFYPAGHYIIRE 176
+ LD + A + E + ++ R + RDL+ N+L+ + K+ Y RE
Sbjct: 120 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 178
Query: 177 GAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWA 236
GAK F I WT APE I D W+
Sbjct: 179 GAK----FPIK---------------------WT--------APEAINYGTFTIKSDVWS 205
Query: 237 LGILMHELLT-------GMKESNVFQ 255
GIL+ E++T GM V Q
Sbjct: 206 FGILLTEIVTHGRIPYPGMTNPEVIQ 231
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 40/122 (32%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL-------EFYPAGHYIIREGAKGDSFF 184
V + +E+L +R + RDL N+LL + VK+ + Y Y+ KGD+
Sbjct: 200 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV----RKGDARL 255
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+ +++APE I +R + D W+ G+L+ E+
Sbjct: 256 PL-----------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEI 286
Query: 245 LT 246
+
Sbjct: 287 FS 288
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 200 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 232
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 40/122 (32%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL-------EFYPAGHYIIREGAKGDSFF 184
V + +E+L +R + RDL N+LL + VK+ + Y Y+ KGD+
Sbjct: 202 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV----RKGDARL 257
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+ +++APE I +R + D W+ G+L+ E+
Sbjct: 258 PL-----------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEI 288
Query: 245 LT 246
+
Sbjct: 289 FS 290
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 202 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 234
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 31/115 (26%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL V RDL N+L+++ K+ D
Sbjct: 128 GMKYLSDMSYVHRDLAARNILVNSNLVCKVS----------------------------D 159
Query: 195 FGFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
FG S+ L +T G + APE I R A D W+ GI+M E+++
Sbjct: 160 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 40/122 (32%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL-------EFYPAGHYIIREGAKGDSFF 184
V + +E+L +R + RDL N+LL + VK+ + Y Y+ KGD+
Sbjct: 209 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV----RKGDARL 264
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+ +++APE I +R + D W+ G+L+ E+
Sbjct: 265 PL-----------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEI 295
Query: 245 LT 246
+
Sbjct: 296 FS 297
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 209 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 241
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 31/115 (26%)
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVD 194
++YL V RDL N+L+++ K+ D
Sbjct: 122 GMKYLSDMSYVHRDLAARNILVNSNLVCKVS----------------------------D 153
Query: 195 FGFSKHLGHSGCKTWTFCGTP---EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
FG S+ L +T G + APE I R A D W+ GI+M E+++
Sbjct: 154 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 40/122 (32%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL-------EFYPAGHYIIREGAKGDSFF 184
V + +E+L +R + RDL N+LL + VK+ + Y Y+ KGD+
Sbjct: 207 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV----RKGDARL 262
Query: 185 IISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHEL 244
+ +++APE I +R + D W+ G+L+ E+
Sbjct: 263 PL-----------------------------KWMAPETIFDRVYTIQSDVWSFGVLLWEI 293
Query: 245 LT 246
+
Sbjct: 294 FS 295
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V + +E+L +R + RDL N+LL + VK+
Sbjct: 207 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 239
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V ++ E C G++ LR + D + + + L F ++ V + + +L ++ +
Sbjct: 125 VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF-SSQVAQGMAFLASKNCIH 183
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG-GQVKVDFGFSKHLGHSG 205
RD+ N+LL N K+ G + + DS +I+ G ++ V
Sbjct: 184 RDVAARNVLLTNGHVAKI-----GDFGLARDIMNDSNYIVKGNARLPV------------ 226
Query: 206 CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I + + D W+ GIL+ E+ +
Sbjct: 227 ----------KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 46/201 (22%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 109
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD + A + E + ++ R + RDL+ N+L+ + K+
Sbjct: 110 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI------------------ 150
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILM 241
DFG ++ + + P ++ APE I D W+ GIL+
Sbjct: 151 ----------ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 242 HELLT-------GMKESNVFQ 255
E++T GM V Q
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQ 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 46/201 (22%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 68 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 118
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD + A + E + ++ R + RDL+ N+L+ + K+
Sbjct: 119 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI------------------ 159
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILM 241
DFG ++ + + P ++ APE I D W+ GIL+
Sbjct: 160 ----------ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 209
Query: 242 HELLT-------GMKESNVFQ 255
E++T GM V Q
Sbjct: 210 TEIVTHGRIPYPGMTNPEVIQ 230
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 46/201 (22%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 109
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD + A + E + ++ R + RDL+ N+L+ + K+
Sbjct: 110 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI------------------ 150
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILM 241
DFG ++ + + P ++ APE I D W+ GIL+
Sbjct: 151 ----------ADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 242 HELLT-------GMKESNVFQ 255
E++T GM V Q
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 87 VYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVF 146
V ++ E C G++ LR + D + + + L F ++ V + + +L ++ +
Sbjct: 117 VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF-SSQVAQGMAFLASKNCIH 175
Query: 147 RDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG-GQVKVDFGFSKHLGHSG 205
RD+ N+LL N K+ G + + DS +I+ G ++ V
Sbjct: 176 RDVAARNVLLTNGHVAKI-----GDFGLARDIMNDSNYIVKGNARLPV------------ 218
Query: 206 CKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE I + + D W+ GIL+ E+ +
Sbjct: 219 ----------KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 30/116 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ L LH G+V RDL P N+LL + + +
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITI--------------------------- 175
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLT 246
DF ++ KT + Y APE++ +G + VD W+ G +M E+
Sbjct: 176 -CDFNLAREDTADANKTH-YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 17 ERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL-DN 59
+R + ++ L LH G+V RDL P N+LL DN
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN 170
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 46/201 (22%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 60 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 110
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD + A + E + ++ R + RDL+ N+L+ + K+
Sbjct: 111 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI------------------ 151
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILM 241
DFG ++ + + P ++ APE I D W+ GIL+
Sbjct: 152 ----------ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 201
Query: 242 HELLT-------GMKESNVFQ 255
E++T GM V Q
Sbjct: 202 TEIVTHGRIPYPGMTNPEVIQ 222
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 30/116 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
++ L LH G+V RDL P N+LL + + +
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITI--------------------------- 175
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKN-RGHDRAVDYWALGILMHELLT 246
DF ++ KT + Y APE++ +G + VD W+ G +M E+
Sbjct: 176 -CDFNLAREDTADANKTH-YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 17 ERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL-DN 59
+R + ++ L LH G+V RDL P N+LL DN
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN 170
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 46/201 (22%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 61 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 111
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD + A + E + ++ R + RDL+ N+L+ + K+
Sbjct: 112 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI------------------ 152
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILM 241
DFG ++ + + P ++ APE I D W+ GIL+
Sbjct: 153 ----------ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 202
Query: 242 HELLT-------GMKESNVFQ 255
E++T GM V Q
Sbjct: 203 TEIVTHGRIPYPGMTNPEVIQ 223
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLL 57
+I +EY+H++ + RD+KP+N L+
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLM 138
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLL 156
+I +EY+H++ + RD+KP+N L+
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLM 138
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+I +EY+H++ + RD+KP+N L+ G KG+ +II G
Sbjct: 112 MISRIEYIHSKNFIHRDVKPDNFLMG------------------LGKKGNLVYIIDFGLA 153
Query: 192 KV--DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG-ILMH 242
K D +H+ + K T GT Y + R D +LG +LM+
Sbjct: 154 KKYRDARTHQHIPYRENKNLT--GTARYASINTHLGIEQSRRDDLESLGYVLMY 205
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLL 57
+I +EY+H++ + RD+KP+N L+
Sbjct: 112 MISRIEYIHSKNFIHRDVKPDNFLM 136
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+I +EY+H++ + RD+KP+N L+ G KG+ +II G
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLMG------------------LGKKGNLVYIIDFGLA 155
Query: 192 KV--DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALG-ILMH 242
K D +H+ + K T GT Y + R D +LG +LM+
Sbjct: 156 KKYRDARTHQHIPYRENKNLT--GTARYASINTHLGIEQSRRDDLESLGYVLMY 207
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLL 57
+I +EY+H++ + RD+KP+N L+
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLM 138
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 46/201 (22%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 109
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD + A + E + ++ R + RDL+ N+L+ + K+
Sbjct: 110 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI------------------ 150
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILM 241
DFG ++ + + P ++ APE I D W+ GIL+
Sbjct: 151 ----------ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 242 HELLT-------GMKESNVFQ 255
E++T GM V Q
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2W1Z|A Chain A, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity.
pdb|2W1Z|B Chain B, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity
Length = 368
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 96/267 (35%), Gaps = 54/267 (20%)
Query: 3 LEACLGGEVWTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENL---LLDN 59
+E+ LG T++R DD + + A E E L F + P N L +
Sbjct: 49 VESELGERPRTLVRGPVLRDDGSYICLEATDQETGEPLEVHVPYFTERPPSNAIKQLSEQ 108
Query: 60 RGYVKLVSRKKKTRQTRLYKTF-------KDSKYVYMLLEACLGGEVWTILR-------- 104
++L+ K RQ + Y F KD K M+ ++W + R
Sbjct: 109 VLRLRLLRGIKNQRQAKAYLRFIFPIDLVKDPKKRKMIRVRLDERDMWVLSRFFLYPRMQ 168
Query: 105 -ERTCFDD---NAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRG 160
D + +S + V A +T +I L G+V D + N+LLD RG
Sbjct: 169 SNLHILGDVLLSHSSTHKSLVHHARLQLTLQLIRLAASLQHYGLVHADFQVRNILLDQRG 228
Query: 161 YVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAP 220
V F +++R+GA S + GF+ PE A
Sbjct: 229 GV---FLTGFEHLVRDGASAVS---------PIGRGFAP---------------PETTAE 261
Query: 221 EIIKNRGHDRAV-----DYWALGILMH 242
++ R H + D W LG+ ++
Sbjct: 262 RMLPYRQHHPTLMTFPFDTWTLGLAIY 288
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 46/201 (22%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 67 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 117
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD + A + E + ++ R + RDL+ N+L+ + K+
Sbjct: 118 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI------------------ 158
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILM 241
DFG ++ + + P ++ APE I D W+ GIL+
Sbjct: 159 ----------ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 208
Query: 242 HELLT-------GMKESNVFQ 255
E++T GM V Q
Sbjct: 209 TEIVTHGRIPYPGMTNPEVIQ 229
>pdb|2QVS|B Chain B, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
Length = 310
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+ Y G II +G K DSF+II G+V +
Sbjct: 186 KIYKDGERIIAQGEKADSFYIIESGEVSI 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 47/132 (35%), Gaps = 38/132 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V ++YL V RDL N+LL + Y K+
Sbjct: 478 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS-------------------------- 511
Query: 192 KVDFGFSKHL--GHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT-- 246
DFG SK L + K T P ++ APE I D W+ G+LM E +
Sbjct: 512 --DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 569
Query: 247 -----GMKESNV 253
GMK S V
Sbjct: 570 QKPYRGMKGSEV 581
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 47/132 (35%), Gaps = 38/132 (28%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
V ++YL V RDL N+LL + Y K+
Sbjct: 479 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS-------------------------- 512
Query: 192 KVDFGFSKHL--GHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT-- 246
DFG SK L + K T P ++ APE I D W+ G+LM E +
Sbjct: 513 --DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 570
Query: 247 -----GMKESNV 253
GMK S V
Sbjct: 571 QKPYRGMKGSEV 582
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 46/201 (22%)
Query: 63 VKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVI 122
L+ + + R RLY +Y++ E G + L+ S I +
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLK--------TPSGIKLTIN 115
Query: 123 EALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDS 182
+ LD + A + E + ++ R + RDL+ N+L+ + K+
Sbjct: 116 KLLD-MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI------------------ 156
Query: 183 FFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTP-EYVAPEIIKNRGHDRAVDYWALGILM 241
DFG ++ + + P ++ APE I D W+ GIL+
Sbjct: 157 ----------ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 242 HELLT-------GMKESNVFQ 255
E++T GM V Q
Sbjct: 207 TEIVTHGRIPYPGMTNPEVIQ 227
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 38/122 (31%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+I + + H+R + RDLKP+NLLL + G
Sbjct: 141 LINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIG--------------------- 179
Query: 192 KVDFGFSKHLG-------HSGCKTWTFCGTPEYVAPEI-IKNRGHDRAVDYWALGILMHE 243
DFG ++ G H W Y PEI + +R + +VD W++ + E
Sbjct: 180 --DFGLARAFGIPIRQFTHEIITLW-------YRPPEILLGSRHYSTSVDIWSIACIWAE 230
Query: 244 LL 245
+L
Sbjct: 231 ML 232
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLL 57
+I + + H+R + RDLKP+NLLL
Sbjct: 141 LINGVNFCHSRRCLHRDLKPQNLLL 165
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 32/119 (26%)
Query: 135 ALEYLHTR---GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
L YLH I+ RD+K N+LLD + F + G
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLD-----------------------EEFEAVVG--- 184
Query: 192 KVDFGFSKHLGHSGCKTWTFC-GTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K + + GT ++APE + D + G+++ EL+TG +
Sbjct: 185 --DFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 241
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 40/144 (27%)
Query: 110 DDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL----- 164
+D+ + +E L + V +E+L +R + RDL N+LL VK+
Sbjct: 186 EDSDGFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGL 245
Query: 165 --EFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEI 222
+ Y Y+ KGD+ + +++APE
Sbjct: 246 ARDIYKNPDYV----RKGDTRLPL-----------------------------KWMAPES 272
Query: 223 IKNRGHDRAVDYWALGILMHELLT 246
I ++ + D W+ G+L+ E+ +
Sbjct: 273 IFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL 65
V +E+L +R + RDL N+LL VK+
Sbjct: 208 VARGMEFLSSRKCIHRDLAARNILLSENNVVKI 240
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 61/158 (38%), Gaps = 20/158 (12%)
Query: 89 MLLEACLGGEVWTILRERTCFDDNAAS---FITACVIEALDFI--TACVIEALEYLHTRG 143
M+ C G++ L R+ D ++ +E DF+ A + +EYL +
Sbjct: 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH 165
Query: 144 IVFRDLKPENLLLDNRGYVKL-------EFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
+V +DL N+L+ ++ VK+ E Y A +Y + + ++ + F
Sbjct: 166 VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFS 225
Query: 197 FSKHLGHSGCKTW--------TFCGTPEYVAPEIIKNR 226
+ G W +CG E+I+NR
Sbjct: 226 IDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 263
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 45/131 (34%)
Query: 125 LDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFF 184
L ++ + A+EYL + + R+L N L+ VK+
Sbjct: 320 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKV-------------------- 359
Query: 185 IISGGQVKVDFGFSK------HLGHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYW 235
DFG S+ + H+G K WT APE + D W
Sbjct: 360 --------ADFGLSRLMTGDTYTAHAGAKFPIKWT--------APESLAYNKFSIKSDVW 403
Query: 236 ALGILMHELLT 246
A G+L+ E+ T
Sbjct: 404 AFGVLLWEIAT 414
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 61/158 (38%), Gaps = 20/158 (12%)
Query: 89 MLLEACLGGEVWTILRERTCFDDNAAS---FITACVIEALDFI--TACVIEALEYLHTRG 143
M+ C G++ L R+ D ++ +E DF+ A + +EYL +
Sbjct: 89 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH 148
Query: 144 IVFRDLKPENLLLDNRGYVKL-------EFYPAGHYIIREGAKGDSFFIISGGQVKVDFG 196
+V +DL N+L+ ++ VK+ E Y A +Y + + ++ + F
Sbjct: 149 VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFS 208
Query: 197 FSKHLGHSGCKTW--------TFCGTPEYVAPEIIKNR 226
+ G W +CG E+I+NR
Sbjct: 209 IDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 246
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 92/257 (35%), Gaps = 54/257 (21%)
Query: 12 WTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKK 71
W R R F + V+EA Y G++ D + + L R+
Sbjct: 41 WEFPRNRLSFGKTLGAGAFGKVVEATAY----GLIKSDAAMTVAVKMLKPSAHLTEREAL 96
Query: 72 TRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-------NAASFITACVIEA 124
+ ++ + + LL AC G ++ E C+ D SFI + A
Sbjct: 97 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 156
Query: 125 L-------------DFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKL-EFYPAG 170
+ + V + + +L ++ + RDL N+LL + K+ +F A
Sbjct: 157 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 216
Query: 171 HYIIREGAKGDSFFIISG-GQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHD 229
H K DS +++ G ++ V +++APE I N +
Sbjct: 217 H------IKNDSNYVVKGNARLPV----------------------KWMAPESIFNCVYT 248
Query: 230 RAVDYWALGILMHELLT 246
D W+ GI + EL +
Sbjct: 249 FESDVWSYGIFLWELFS 265
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 58/168 (34%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 289 YIITEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 339
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
+L N L+ VK+ DFG S+ +
Sbjct: 340 NLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 371
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 372 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 58/168 (34%), Gaps = 54/168 (32%)
Query: 88 YMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFR 147
Y++ E G + LRE + NA + ++ + A+EYL + + R
Sbjct: 331 YIITEFMTYGNLLDYLRECNRQEVNAVVLL---------YMATQISSAMEYLEKKNFIHR 381
Query: 148 DLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK------HL 201
+L N L+ VK+ DFG S+ +
Sbjct: 382 NLAARNCLVGENHLVKV----------------------------ADFGLSRLMTGDTYT 413
Query: 202 GHSGCK---TWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
H+G K WT APE + D WA G+L+ E+ T
Sbjct: 414 AHAGAKFPIKWT--------APESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 83 DSKYVYMLLEACLGGEVWTILRERT--CFDDNAASFITACVIEALDFITACVIEALEYLH 140
D+ +V LL CL V I++ C D + L + + + YL
Sbjct: 75 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
R +V RDL N+L+ +VK+ DFG +K
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKI----------------------------TDFGLAKL 166
Query: 201 LGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 158
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 159 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 83 DSKYVYMLLEACLGGEVWTILRERT--CFDDNAASFITACVIEALDFITACVIEALEYLH 140
D+ +V LL CL V I++ C D + L + + + YL
Sbjct: 82 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
R +V RDL N+L+ +VK+ DFG +K
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKI----------------------------TDFGLAKL 173
Query: 201 LGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 174 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 83 DSKYVYMLLEACLGGEVWTILRERT--CFDDNAASFITACVIEALDFITACVIEALEYLH 140
D+ +V LL CL V I++ C D + L + + + YL
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
R +V RDL N+L+ +VK+ DFG +K
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKI----------------------------TDFGLAKL 170
Query: 201 LGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 171 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 120 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 152
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 153 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 165
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 166 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 83 DSKYVYMLLEACLGGEVWTILRERT--CFDDNAASFITACVIEALDFITACVIEALEYLH 140
D+ +V LL CL V I++ C D + L + + + YL
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
R +V RDL N+L+ +VK+ DFG +K
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKI----------------------------TDFGLAKL 167
Query: 201 LGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 168 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 83 DSKYVYMLLEACLGGEVWTILRERT--CFDDNAASFITACVIEALDFITACVIEALEYLH 140
D+ +V LL CL V I++ C D + L + + + YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
R +V RDL N+L+ +VK+ DFG +K
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKI----------------------------TDFGLAKL 168
Query: 201 LGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 83 DSKYVYMLLEACLGGEVWTILRERT--CFDDNAASFITACVIEALDFITACVIEALEYLH 140
D+ +V LL CL V I++ C D + L + + + YL
Sbjct: 78 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
R +V RDL N+L+ +VK+ DFG +K
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKI----------------------------TDFGLAKL 169
Query: 201 LGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 170 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 165
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 166 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 136 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 168
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 169 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 158
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 159 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 161
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 162 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 160
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 161 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 151 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 183
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 184 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 160 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 192
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 193 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 158
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 159 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 158
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 159 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 132 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 164
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 165 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 159
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 160 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 161
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 162 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 161
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 162 -TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1CX4|A Chain A, Crystal Structure Of A Deletion Mutant Of The Type Ii Beta
Regulatory Subunit Of Camp-Dependent Protein Kinase
Length = 305
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 167 YPAGHYIIREGAKGDSFFIISGGQVKV 193
Y G II +G DSFFI+ G+V++
Sbjct: 184 YNDGEQIIAQGDSADSFFIVESGEVRI 210
>pdb|3OF1|A Chain A, Crystal Structure Of Bcy1, The Yeast Regulatory Subunit Of
Pka
Length = 246
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 165 EFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+ Y G IIREG +G++F++I G V V
Sbjct: 151 KIYQPGETIIREGDQGENFYLIEYGAVDV 179
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 33/171 (19%)
Query: 76 RLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEA 135
RL +S V +L E G + + LR N F ++ L I +
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRL------NDGQFTVIQLVGMLRGIAS----G 130
Query: 136 LEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDF 195
+ YL V RDL N+L+++ K+ + ++ E + + GG++ +
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL-EENSSDPTETSSLGGKIPI-- 187
Query: 196 GFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
WT APE I R A D W+ GI+M E+++
Sbjct: 188 ------------RWT--------APEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3TNP|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|E Chain E, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 416
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 167 YPAGHYIIREGAKGDSFFIISGGQVKV 193
Y G II +G DSFFI+ G+VK+
Sbjct: 295 YNDGEQIIAQGDLADSFFIVESGEVKI 321
>pdb|3TNQ|A Chain A, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 416
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 167 YPAGHYIIREGAKGDSFFIISGGQVKV 193
Y G II +G DSFFI+ G+VK+
Sbjct: 295 YNDGEQIIAQGDLADSFFIVESGEVKI 321
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 33/163 (20%)
Query: 84 SKYVYMLLEACLGGEVWTILRERTCFDDNAASFITACVIEALDFITACVIEALEYLHTRG 143
S V ++ E G + + LR+ N F ++ L I A ++YL
Sbjct: 80 STPVMIITEFMENGSLDSFLRQ------NDGQFTVIQLVGMLRGIAA----GMKYLADMN 129
Query: 144 IVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHLGH 203
V R L N+L+++ K+ + ++ + ++ GG++ +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFL-EDDTSDPTYTSALGGKIPI---------- 178
Query: 204 SGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
WT APE I+ R A D W+ GI+M E+++
Sbjct: 179 ----RWT--------APEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|4DIN|B Chain B, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 381
Score = 30.4 bits (67), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 169 AGHYIIREGAKGDSFFIISGGQVKV 193
AG +I++G +GD+F+++ G+V V
Sbjct: 160 AGETVIQQGNEGDNFYVVDQGEVDV 184
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 30.4 bits (67), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 90/256 (35%), Gaps = 52/256 (20%)
Query: 12 WTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKK 71
W R R F + V+EA Y G++ D + + L R+
Sbjct: 18 WEFPRNRLSFGKTLGAGAFGKVVEATAY----GLIKSDAAMTVAVKMLKPSAHLTEREAL 73
Query: 72 TRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-------NAASFITACVIEA 124
+ ++ + + LL AC G ++ E C+ D SFI + A
Sbjct: 74 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133
Query: 125 L-------------DFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGH 171
+ + V + + +L ++ + RDL N+LL + K+
Sbjct: 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI-----CD 188
Query: 172 YIIREGAKGDSFFIISG-GQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDR 230
+ + K DS +++ G ++ V +++APE I N +
Sbjct: 189 FGLARDIKNDSNYVVKGNARLPV----------------------KWMAPESIFNCVYTF 226
Query: 231 AVDYWALGILMHELLT 246
D W+ GI + EL +
Sbjct: 227 ESDVWSYGIFLWELFS 242
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 83 DSKYVYMLLEACLGGEVWTILRERT--CFDDNAASFITACVIEALDFITACVIEALEYLH 140
D+ +V LL CL V I++ C D + L + + + YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
R +V RDL N+L+ +VK+ DFG +K
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKI----------------------------TDFGRAKL 168
Query: 201 LGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 33 VIEALEYLHTR-GIVFRDLKPENLLL 57
V++ L+YLH++ I+ D+KPEN+L+
Sbjct: 149 VLQGLDYLHSKCKIIHTDIKPENILM 174
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 132 VIEALEYLHTR-GIVFRDLKPENLLL 156
V++ L+YLH++ I+ D+KPEN+L+
Sbjct: 149 VLQGLDYLHSKCKIIHTDIKPENILM 174
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 83 DSKYVYMLLEACLGGEVWTILRERT--CFDDNAASFITACVIEALDFITACVIEALEYLH 140
D+ +V LL CL V I++ C D + L + + + YL
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
R +V RDL N+L+ +VK+ DFG +K
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKI----------------------------TDFGRAKL 168
Query: 201 LGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 30.4 bits (67), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 25/115 (21%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + ++YL +R V RDL N+L+++ VK+ G + + + + D V
Sbjct: 123 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKI-----GDFGLTKAIETDK----EXXTV 173
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
K D + F + APE + A D W+ G+ +HELLT
Sbjct: 174 KDDR-----------DSPVF-----WYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 25/115 (21%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + ++YL +R V RDL N+L+++ VK+ G + + + + D V
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKI-----GDFGLTKAIETDK----EXXTV 185
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
K D + F + APE + A D W+ G+ +HELLT
Sbjct: 186 KDDR-----------DSPVF-----WYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 90/256 (35%), Gaps = 52/256 (20%)
Query: 12 WTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKK 71
W R R F + V+EA Y G++ D + + L R+
Sbjct: 34 WEFPRNRLSFGKTLGAGAFGKVVEATAY----GLIKSDAAMTVAVKMLKPSAHLTEREAL 89
Query: 72 TRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-------NAASFITACVIEA 124
+ ++ + + LL AC G ++ E C+ D SFI + A
Sbjct: 90 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 149
Query: 125 L-------------DFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGH 171
+ + V + + +L ++ + RDL N+LL + K+
Sbjct: 150 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI-----CD 204
Query: 172 YIIREGAKGDSFFIISG-GQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDR 230
+ + K DS +++ G ++ V +++APE I N +
Sbjct: 205 FGLARDIKNDSNYVVKGNARLPV----------------------KWMAPESIFNCVYTF 242
Query: 231 AVDYWALGILMHELLT 246
D W+ GI + EL +
Sbjct: 243 ESDVWSYGIFLWELFS 258
>pdb|1Q3E|A Chain A, Hcn2j 443-645 In The Presence Of Cgmp
pdb|1Q3E|B Chain B, Hcn2j 443-645 In The Presence Of Cgmp
Length = 207
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+K E + G YIIREG G + I G V V
Sbjct: 95 LKFEVFQPGDYIIREGTIGKKMYFIQHGVVSV 126
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 80/219 (36%), Gaps = 43/219 (19%)
Query: 44 GIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLG-GEVWTI 102
G++F NLL + + +K R+ Q R D Y LL C G V+
Sbjct: 23 GVIFEGT---NLLNNQQVAIKFEPRRSDAPQLR------DEYRTYKLLAGCTGIPNVYYF 73
Query: 103 LRER-------TCFDDNAASFITAC----VIEALDFITACVIEALEYLHTRGIVFRDLKP 151
+E + + C ++ + ++ ++ +H + +V+RD+KP
Sbjct: 74 GQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKP 133
Query: 152 ENLLLDNRGYVKLEFYPAGHYIIREGAK-GDSFFIISGGQVKV--DFGFSKHLGHSGCKT 208
+N L I R +K + +++ G VK D +H+ + K
Sbjct: 134 DNFL-----------------IGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKK- 175
Query: 209 WTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GT Y++ R R D ALG + L G
Sbjct: 176 -NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 213
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
F + ++ ++ +H + +V+RD+KP+N L+
Sbjct: 102 FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLI 138
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 165
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 166 -TDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3U10|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+K E + G YIIREG G + I G V V
Sbjct: 98 LKFEVFQPGDYIIREGTIGKKMYFIQHGVVSV 129
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 83 DSKYVYMLLEACLGGEVWTILRERT--CFDDNAASFITACVIEALDFITACVIEALEYLH 140
D+ +V LL CL V I++ C D + L + + + YL
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 141 TRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKH 200
R +V RDL N+L+ +VK+ DFG +K
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKI----------------------------TDFGRAKL 170
Query: 201 LGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 171 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3FFQ|A Chain A, Hcn2i 443-640 Apo-State
pdb|3FFQ|B Chain B, Hcn2i 443-640 Apo-State
Length = 202
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+K E + G YIIREG G + I G V V
Sbjct: 95 LKFEVFQPGDYIIREGTIGKKMYFIQHGVVSV 126
>pdb|3BPZ|A Chain A, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|B Chain B, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|C Chain C, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|D Chain D, Hcn2-I 443-460 E502k In The Presence Of Camp
Length = 202
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+K E + G YIIREG G + I G V V
Sbjct: 95 LKFEVFQPGDYIIREGTIGKKMYFIQHGVVSV 126
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 160
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 161 -TDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2Q0A|A Chain A, Structure And Rearrangements In The Carboxy-Terminal
Region Of Spih Channels
pdb|2Q0A|B Chain B, Structure And Rearrangements In The Carboxy-Terminal
Region Of Spih Channels
Length = 200
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+K E + G YIIREG G + I G V V
Sbjct: 93 LKFEVFQPGDYIIREGTIGKKMYFIQHGVVSV 124
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 90/256 (35%), Gaps = 52/256 (20%)
Query: 12 WTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKK 71
W R R F + V+EA Y G++ D + + L R+
Sbjct: 41 WEFPRNRLSFGKTLGAGAFGKVVEATAY----GLIKSDAAMTVAVKMLKPSAHLTEREAL 96
Query: 72 TRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-------NAASFITACVIEA 124
+ ++ + + LL AC G ++ E C+ D SFI + A
Sbjct: 97 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 156
Query: 125 L-------------DFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGH 171
+ + V + + +L ++ + RDL N+LL + K+
Sbjct: 157 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI-----CD 211
Query: 172 YIIREGAKGDSFFIISG-GQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDR 230
+ + K DS +++ G ++ V +++APE I N +
Sbjct: 212 FGLARDIKNDSNYVVKGNARLPV----------------------KWMAPESIFNCVYTF 249
Query: 231 AVDYWALGILMHELLT 246
D W+ GI + EL +
Sbjct: 250 ESDVWSYGIFLWELFS 265
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 30/117 (25%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ +VK+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI--------------------------- 158
Query: 192 KVDFGFSKHLGHSGCKTWTFCG-TP-EYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
DFG +K LG + G P +++A E I +R + D W+ G+ + EL+T
Sbjct: 159 -TDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 90/256 (35%), Gaps = 52/256 (20%)
Query: 12 WTILRERTCFDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLVSRKKK 71
W R R F + V+EA Y G++ D + + L R+
Sbjct: 36 WEFPRNRLSFGKTLGAGAFGKVVEATAY----GLIKSDAAMTVAVKMLKPSAHLTEREAL 91
Query: 72 TRQTRLYKTFKDSKYVYMLLEACLGGEVWTILRERTCFDD-------NAASFITACVIEA 124
+ ++ + + LL AC G ++ E C+ D SFI + A
Sbjct: 92 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 151
Query: 125 L-------------DFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGH 171
+ + V + + +L ++ + RDL N+LL + K+
Sbjct: 152 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI-----CD 206
Query: 172 YIIREGAKGDSFFIISG-GQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDR 230
+ + K DS +++ G ++ V +++APE I N +
Sbjct: 207 FGLARDIKNDSNYVVKGNARLPV----------------------KWMAPESIFNCVYTF 244
Query: 231 AVDYWALGILMHELLT 246
D W+ GI + EL +
Sbjct: 245 ESDVWSYGIFLWELFS 260
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 80/219 (36%), Gaps = 43/219 (19%)
Query: 44 GIVFRDLKPENLLLDNRGYVKLVSRKKKTRQTRLYKTFKDSKYVYMLLEACLG-GEVWTI 102
G++F NLL + + +K R+ Q R D Y LL C G V+
Sbjct: 24 GVIFEGT---NLLNNQQVAIKFEPRRSDAPQLR------DEYRTYKLLAGCTGIPNVYYF 74
Query: 103 LRER-------TCFDDNAASFITAC----VIEALDFITACVIEALEYLHTRGIVFRDLKP 151
+E + + C ++ + ++ ++ +H + +V+RD+KP
Sbjct: 75 GQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKP 134
Query: 152 ENLLLDNRGYVKLEFYPAGHYIIREGAK-GDSFFIISGGQVKV--DFGFSKHLGHSGCKT 208
+N L I R +K + +++ G VK D +H+ + K
Sbjct: 135 DNFL-----------------IGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKK- 176
Query: 209 WTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTG 247
GT Y++ R R D ALG + L G
Sbjct: 177 -NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 214
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 21 FDDNAASFITACVIEALEYLHTRGIVFRDLKPENLLL 57
F + ++ ++ +H + +V+RD+KP+N L+
Sbjct: 103 FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLI 139
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 33 VIEALEYLHTRGIVFRDLKPENLLL 57
+I +E++H++ + RD+KP+N L+
Sbjct: 112 MINRVEFVHSKSFLHRDIKPDNFLM 136
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLL 156
+I +E++H++ + RD+KP+N L+
Sbjct: 112 MINRVEFVHSKSFLHRDIKPDNFLM 136
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 32/119 (26%)
Query: 135 ALEYLHTR---GIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
L YLH I+ RD+K N+LLD + F + G
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLD-----------------------EEFEAVVG--- 176
Query: 192 KVDFGFSKHLGHSGCKTWTFC-GTPEYVAPEIIKNRGHDRAVDYWALGILMHELLTGMK 249
DFG +K + + G ++APE + D + G+++ EL+TG +
Sbjct: 177 --DFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
>pdb|3ETQ|A Chain A, X-Ray Structure Of Cysteine-Free Fragment Of Mhcn2 C-
Terminal Region From Amino Acids 443-630 Including
C508n, C584s, And C601s Mutations
pdb|3ETQ|B Chain B, X-Ray Structure Of Cysteine-Free Fragment Of Mhcn2 C-
Terminal Region From Amino Acids 443-630 Including
C508n, C584s, And C601s Mutations
Length = 204
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+K E + G YIIREG G + I G V V
Sbjct: 97 LKFEVFQPGDYIIREGTIGKKMYFIQHGVVSV 128
>pdb|4HBN|A Chain A, Crystal Structure Of The Human Hcn4 Channel C-terminus
Carrying The S672r Mutation
Length = 205
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
++ E + G YIIREG G + I G V V
Sbjct: 92 LRFEVFQPGDYIIREGTIGKKMYFIQHGVVSV 123
>pdb|3U0Z|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
pdb|3U0Z|B Chain B, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSKHL 201
++ E + G YIIREGA G + I G V SK +
Sbjct: 98 LRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEM 137
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 86 YVYMLLEACLGGEVWTILRERTCFDDNAASFI---TACVIEALDFI--TACVIEALEYLH 140
Y+Y+ +E G + LR+ + + A I TA + + + A V ++YL
Sbjct: 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 159
Query: 141 TRGIVFRDLKPENLLL 156
+ + RDL N+L+
Sbjct: 160 QKQFIHRDLAARNILV 175
>pdb|1RL3|A Chain A, Crystal Structure Of Camp-free R1a Subunit Of Pka
pdb|1RL3|B Chain B, Crystal Structure Of Camp-free R1a Subunit Of Pka
pdb|1RGS|A Chain A, Regulatory Subunit Of Camp Dependent Protein Kinase
Length = 288
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 169 AGHYIIREGAKGDSFFIISGGQ--VKVDFGFSKHLGHSGC--KTWTFCGTP 215
AG +I++G +GD+F++I G+ V V+ ++ +G G + GTP
Sbjct: 67 AGETVIQQGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGSFGELALIYGTP 117
>pdb|3OTF|A Chain A, Structural Basis For The Camp-Dependent Gating In Human
Hcn4 Channel
Length = 220
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
++ E + G YIIREG G + I G V V
Sbjct: 92 LRFEVFQPGDYIIREGTIGKKMYFIQHGVVSV 123
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 86 YVYMLLEACLGGEVWTILRERTCFDDNAASFI---TACVIEALDFI--TACVIEALEYLH 140
Y+Y+ +E G + LR+ + + A I TA + + + A V ++YL
Sbjct: 90 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 149
Query: 141 TRGIVFRDLKPENLLL 156
+ + RDL N+L+
Sbjct: 150 QKQFIHRDLAARNILV 165
>pdb|1NE4|A Chain A, Crystal Structure Of Rp-Camp Binding R1a Subunit Of Camp-
Dependent Protein Kinase
pdb|1NE6|A Chain A, Crystal Structure Of Sp-Camp Binding R1a Subunit Of Camp-
Dependent Protein Kinase
Length = 283
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 169 AGHYIIREGAKGDSFFIISGGQ--VKVDFGFSKHLGHSGC--KTWTFCGTP 215
AG +I++G +GD+F++I G+ V V+ ++ +G G + GTP
Sbjct: 65 AGETVIQQGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGSFGELALIYGTP 115
>pdb|1Q43|A Chain A, Hcn2i 443-640 In The Presence Of Camp, Selenomethionine
Derivative
pdb|1Q43|B Chain B, Hcn2i 443-640 In The Presence Of Camp, Selenomethionine
Derivative
pdb|1Q5O|A Chain A, Hcn2j 443-645 In The Presence Of Camp, Selenomethionine
Derivative
Length = 207
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
+K E + G YIIREG G + I G V V
Sbjct: 95 LKFEVFQPGDYIIREGTIGKKXYFIQHGVVSV 126
>pdb|3U11|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
pdb|3U11|B Chain B, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 162 VKLEFYPAGHYIIREGAKGDSFFIISGGQVKV 193
++ E + G YIIREG G + I G V V
Sbjct: 98 LRFEVFQPGDYIIREGTIGKKMYFIQHGVVSV 129
>pdb|2QCS|B Chain B, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
Length = 291
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 169 AGHYIIREGAKGDSFFIISGGQ--VKVDFGFSKHLGHSGC--KTWTFCGTP 215
AG +I++G +GD+F++I G+ V V+ ++ +G G + GTP
Sbjct: 69 AGETVIQQGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGSFGELALIYGTP 119
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 33/138 (23%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
++ + + + + ++ L Y+H I+ RD+K N+L+ G +KL
Sbjct: 116 SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL--------- 166
Query: 174 IREGAKGDSFFIISGGQVKVDFG----FSKHLGHSGCKTWTFCGTPEYVAPE-IIKNRGH 228
DFG FS + T Y PE ++ R +
Sbjct: 167 -------------------ADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY 207
Query: 229 DRAVDYWALGILMHELLT 246
+D W G +M E+ T
Sbjct: 208 GPPIDLWGAGCIMAEMWT 225
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ ++ L Y+H I+ RD+K N+L+ G +KL
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLA 167
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 33/124 (26%)
Query: 128 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIIS 187
+ ++ L Y+H I+ RD+K N+L+ G +KL
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL----------------------- 166
Query: 188 GGQVKVDFG----FSKHLGHSGCKTWTFCGTPEYVAPE-IIKNRGHDRAVDYWALGILMH 242
DFG FS + T Y PE ++ R + +D W G +M
Sbjct: 167 -----ADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA 221
Query: 243 ELLT 246
E+ T
Sbjct: 222 EMWT 225
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ ++ L Y+H I+ RD+K N+L+ G +KL
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLA 167
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 106 RTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLD 157
+ ++ NA F V++ ++ +++ LEY+H V D+K NLLL+
Sbjct: 139 QKIYEANAKRFSRKTVLQ----LSLRILDILEYIHEHEYVHGDIKASNLLLN 186
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 106 RTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLD 157
+ ++ NA F V++ ++ +++ LEY+H V D+K NLLL+
Sbjct: 139 QKIYEANAKRFSRKTVLQ----LSLRILDILEYIHEHEYVHGDIKASNLLLN 186
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 33/138 (23%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
++ + + + + ++ L Y+H I+ RD+K N+L+ G +KL
Sbjct: 115 SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL--------- 165
Query: 174 IREGAKGDSFFIISGGQVKVDFG----FSKHLGHSGCKTWTFCGTPEYVAPE-IIKNRGH 228
DFG FS + T Y PE ++ R +
Sbjct: 166 -------------------ADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY 206
Query: 229 DRAVDYWALGILMHELLT 246
+D W G +M E+ T
Sbjct: 207 GPPIDLWGAGCIMAEMWT 224
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ ++ L Y+H I+ RD+K N+L+ G +KL
Sbjct: 129 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLA 166
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 33/138 (23%)
Query: 114 ASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYI 173
++ + + + + ++ L Y+H I+ RD+K N+L+ G +KL
Sbjct: 116 SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL--------- 166
Query: 174 IREGAKGDSFFIISGGQVKVDFG----FSKHLGHSGCKTWTFCGTPEYVAPE-IIKNRGH 228
DFG FS + T Y PE ++ R +
Sbjct: 167 -------------------ADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY 207
Query: 229 DRAVDYWALGILMHELLT 246
+D W G +M E+ T
Sbjct: 208 GPPIDLWGAGCIMAEMWT 225
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 29 ITACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLV 66
+ ++ L Y+H I+ RD+K N+L+ G +KL
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLA 167
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 28/119 (23%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
++ V + + +L ++ + RD+ N+LL N K+ G + + DS +I+ G
Sbjct: 164 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI-----GDFGLARDIMNDSNYIVKG 218
Query: 189 -GQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
++ V +++APE I + + D W+ GIL+ E+ +
Sbjct: 219 NARLPV----------------------KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3PVB|B Chain B, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 160
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 169 AGHYIIREGAKGDSFFIISGGQ--VKVDFGFSKHLGHSGC 206
AG +I++G +GD+F++I G+ V V+ ++ +G G
Sbjct: 75 AGETVIQQGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGS 114
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 28/119 (23%)
Query: 129 TACVIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG 188
++ V + + +L ++ + RD+ N+LL N K+ G + + DS +I+ G
Sbjct: 172 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI-----GDFGLARDIMNDSNYIVKG 226
Query: 189 -GQVKVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
++ V +++APE I + + D W+ GIL+ E+ +
Sbjct: 227 NARLPV----------------------KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3FHI|B Chain B, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
pdb|3IIA|A Chain A, Crystal Structure Of Apo (91-244) Ria Subunit Of
Camp-Dependent Protein Kinase
pdb|3PLQ|A Chain A, Crystal Structure Of Pka Type I Regulatory Subunit Bound
With Rp-8-Br- Camps
pdb|3PNA|A Chain A, Crystal Structure Of Camp Bound (91-244)ria Subunit Of
Camp-Dependent Protein Kinase
pdb|3PNA|B Chain B, Crystal Structure Of Camp Bound (91-244)ria Subunit Of
Camp-Dependent Protein Kinase
Length = 154
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 169 AGHYIIREGAKGDSFFIISGGQVKV 193
AG +I++G +GD+F++I G++ V
Sbjct: 68 AGETVIQQGDEGDNFYVIDQGEMDV 92
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 106 RTCFDDNAASFITACVIEALDFITACVIEALEYLHTRGIVFRDLKPENLLLD 157
+ ++ NA F V++ ++ +++ LEY+H V D+K NLLL+
Sbjct: 139 QKIYEANAKRFSRKTVLQ----LSLRILDILEYIHEHEYVHGDIKASNLLLN 186
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 69/173 (39%), Gaps = 40/173 (23%)
Query: 87 VYMLLEACLGGEVWTILR-ERTCFDDNAASF-----------ITACVIEALDFITACVIE 134
+Y++ E C G++ LR +R F ++ + + E L V +
Sbjct: 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183
Query: 135 ALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISG-GQVKV 193
+E+L + V RDL N+L+ + VK+ + I+ DS +++ G ++ V
Sbjct: 184 GMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM-----SDSNYVVRGNARLPV 238
Query: 194 DFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++APE + + D W+ GIL+ E+ +
Sbjct: 239 ----------------------KWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 26/115 (22%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ + +VK+ + G + EG + + + GG++
Sbjct: 126 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDF--GLARLLEGDEKE--YNADGGKM 181
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ +++A E I R D W+ G+ + EL+T
Sbjct: 182 PI----------------------KWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 26/115 (22%)
Query: 132 VIEALEYLHTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQV 191
+ + + YL R +V RDL N+L+ + +VK+ + G + EG + + + GG++
Sbjct: 149 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDF--GLARLLEGDEKE--YNADGGKM 204
Query: 192 KVDFGFSKHLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+ +++A E I R D W+ G+ + EL+T
Sbjct: 205 PI----------------------KWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 32/167 (19%)
Query: 84 SKYVYMLLEACLGGEVW--TILRERTCFDDNAASFITACVIEALDFITAC--VIEALEYL 139
S YV LL CL V T L C D+ + + D + C + + + YL
Sbjct: 78 SPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRE--NRGRLGSQDLLNWCMQIAKGMSYL 135
Query: 140 HTRGIVFRDLKPENLLLDNRGYVKLEFYPAGHYIIREGAKGDSFFIISGGQVKVDFGFSK 199
+V RDL N+L+ + +VK+ + + + ++ + GG+V +
Sbjct: 136 EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID----ETEYHADGGKVPI------ 185
Query: 200 HLGHSGCKTWTFCGTPEYVAPEIIKNRGHDRAVDYWALGILMHELLT 246
+++A E I R D W+ G+ + EL+T
Sbjct: 186 ----------------KWMALESILRRRFTHQSDVWSYGVTVWELMT 216
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.142 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,075,090
Number of Sequences: 62578
Number of extensions: 344173
Number of successful extensions: 4320
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 1314
Number of HSP's gapped (non-prelim): 2667
length of query: 255
length of database: 14,973,337
effective HSP length: 97
effective length of query: 158
effective length of database: 8,903,271
effective search space: 1406716818
effective search space used: 1406716818
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)