RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy3183
(126 letters)
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 131 bits (331), Expect = 2e-38
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
+Q Y I++ K+ FP H + + L++ L + +R G + G+ DIK HKWF
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDT 102
DW + + + P IP KGP DTSNFD Y E +
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEK 342
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 117 bits (295), Expect = 3e-33
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
M+TY I+N ++ FP + L+ L ++RLG + G D+K H WF+
Sbjct: 209 MKTYEKILN---AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265
Query: 61 DWDGLRNQTLTPPIIPVIK-GPTDTSNFDRYSAENDIKGPTDTSNFD 106
W+ L ++ + P P I+ G DTS FD+Y E+ G +
Sbjct: 266 VWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDINYGVQGEDPYA 312
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 105 bits (263), Expect = 4e-28
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 1 MQTYNMIINVGIDKIPFPKH--VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
+ TY+ I+N + + FP +++ A++LI A + RLG R G+ +IK+H +F+
Sbjct: 279 VGTYSKIMN-HKNSLTFPDDNDISKEAKNLICAFLTD-REVRLG--RNGVEEIKRHLFFK 334
Query: 59 GFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVP 115
W + P++P + DTSNFD + KG +T + N +P
Sbjct: 335 NDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEED---KGEEETFPIPKAFVGNQLP 388
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 103 bits (258), Expect = 9e-28
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+T MI+ K+ P+ ++ AQSL++ L K +PA RLG G+ +IK+H +F D
Sbjct: 233 ETMTMILK---AKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289
Query: 62 WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
W+ L + + PP P P DT FD
Sbjct: 290 WNKLYRREIHPPFKPATGRPEDTFYFDP 317
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 103 bits (258), Expect = 9e-28
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+T + I+ K+ P ++T+ A+ L+K L K + A RLG G +++ H +F+ +
Sbjct: 228 KTIDKILK---CKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN 284
Query: 62 WDGLRNQTLTPPIIPVIKGPTDTSNFDR-YSAENDIKGPTDTS 103
W+ L + + PP P+++ D S FD ++ + + P D++
Sbjct: 285 WEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDST 327
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 101 bits (255), Expect = 3e-27
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+ I+ + P+P+ ++ A+ LI+ L + P +RLG +IK+H +FQ +
Sbjct: 273 EISRRILK---SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 329
Query: 62 WDGLRNQTLTPPIIPVIKGPTDTSNF 87
WD L + + P PVI+ D SNF
Sbjct: 330 WDDLAAKKVPAPFKPVIRDELDVSNF 355
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 99.6 bits (249), Expect = 2e-26
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+ Y+ I+N + ++T +A+ L++ L ++ +RLG + ++IK H +F +
Sbjct: 246 EMYDNILN---KPLQLKPNITNSARHLLEGLLQKDRTKRLGAK-DDFMEIKSHVFFSLIN 301
Query: 62 WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
WD L N+ +TPP P + GP D +FD
Sbjct: 302 WDDLINKKITPPFNPNVSGPNDLRHFDP 329
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 98.1 bits (245), Expect = 7e-26
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+ + +I+ ++I FP+ ++ A+SL+ L K+ P +RLG ++ +H++F +
Sbjct: 212 RLFELILM---EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
Query: 62 WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
W + + L PP P + DT FD
Sbjct: 269 WQDVVQKKLLPPFKPQVTSEVDTRYFDD 296
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 97.3 bits (243), Expect = 2e-25
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY-QRGGIVDIKKHKWFQGF 60
+ I+N D++ +P + A ++K+ ++P RLG +GG I +H +F+
Sbjct: 231 DLFEAILN---DEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287
Query: 61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
DW L ++ + PP P IK D SNFD
Sbjct: 288 DWAQLNHRQIEPPFRPRIKSREDVSNFDP 316
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 97.5 bits (243), Expect = 2e-25
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 2 QTYNMIINVGIDKIPFP---KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
+TY I++ + + P + V A+ I+ L P RLG RGG D + H +F
Sbjct: 277 ETYGKIVH-YKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLG--RGGAGDFRTHPFFF 332
Query: 59 GFDWDGLRNQTLTPPIIPVIKGPTDTSNFD----RYSAENDIKGPTDTSNFDRYSAENDV 114
G DWDGLR+ PP P +G TDT NFD +A G T + + +
Sbjct: 333 GLDWDGLRDS--VPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIREGAPLGVHL 390
Query: 115 P 115
P
Sbjct: 391 P 391
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 97.1 bits (242), Expect = 5e-25
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+ + +I+ ++I FP+ + A+SL+ L K+ P +RLG +I +H++F G
Sbjct: 356 KLFELILM---EEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV 412
Query: 62 WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
W + + L+PP P + TDT FD
Sbjct: 413 WQHVYEKKLSPPFKPQVTSETDTRYFDE 440
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 95.4 bits (238), Expect = 8e-25
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY-QRGGIVDIKKHKWFQGF 60
+ +I+ +I P+ ++ A S++K+ + P ERLG + G DI+ H +F+
Sbjct: 226 YLFQVILE---KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282
Query: 61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
DWD + + + PP P I G NFD
Sbjct: 283 DWDMMEQKQVVPPFKPNISGEFGLDNFDS 311
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 96.0 bits (239), Expect = 1e-24
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 1 MQTYNMIINVGIDKIPFPKH---VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 57
++TY I+N ++ FP V+ A+ LI+ L S RLG + GI D KKH +F
Sbjct: 287 VETYGKIMN-HKERFQFPTQVTDVSENAKDLIRRLIC-SREHRLG--QNGIEDFKKHPFF 342
Query: 58 QGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRY 90
G DWD +RN P IP + PTDTSNFD
Sbjct: 343 SGIDWDNIRN--CEAPYIPEVSSPTDTSNFDVD 373
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 94.2 bits (235), Expect = 2e-24
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+ ++ I D +P+ + + A+ L+ L P +RLG + DI++H F+ +
Sbjct: 225 ELFHSIRM---DNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG----DIRQHPLFREIN 277
Query: 62 WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
W+ L + + PP P +K P D SNFD+
Sbjct: 278 WEELERKEIDPPFRPKVKSPFDCSNFDK 305
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 94.7 bits (236), Expect = 2e-24
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY-QRGGIVDIKKHKWFQGF 60
+ +I+ +I P+ ++ A S++K+ + P ERLG + G DI+ H +F+
Sbjct: 269 YLFQVILE---KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325
Query: 61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
DWD + + + PP P I G NFD
Sbjct: 326 DWDMMEQKQVVPPFKPNISGEFGLDNFDS 354
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 92.7 bits (231), Expect = 8e-24
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+ + I+ + +PK +++ A ++ K L + P +RLG G DIK+H +F+ D
Sbjct: 228 ELFQSIME---HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 284
Query: 62 WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
W+ L + + PP P G + NFDR
Sbjct: 285 WEKLERKEIQPPYKPKACGR-NAENFDR 311
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 92.8 bits (230), Expect = 2e-23
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+ + I+ + +PK +++ A ++ K L + P +RLG G DIK+H +F+ D
Sbjct: 549 ELFQSIME---HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 605
Query: 62 WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
W+ L + + PP P G + NFDR
Sbjct: 606 WEKLERKEIQPPYKPKASG-RNAENFDR 632
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 91.5 bits (227), Expect = 7e-23
Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 8/113 (7%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+ M + + P + +SL++ L + RLG G ++K+ +F+ D
Sbjct: 401 EIDRMTLT---MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457
Query: 62 WDGLRNQTLTPPIIPVIKGP-----TDTSNFDRYSAENDIKGPTDTSNFDRYS 109
W + Q PP+IP D +FD + +D + +
Sbjct: 458 WQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFP 510
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 89.1 bits (221), Expect = 5e-22
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD 63
++ + + + A+SL L + PAERLG + G ++K+H F+ ++
Sbjct: 398 ERLVKE---VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFK 454
Query: 64 GLRNQTLTPPIIPVIKGP--TDTSNFDRYSAENDIKG-PTDTSNFDRYS 109
L L PP P + D + +++S ++ PTD + +++
Sbjct: 455 RLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFA 503
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 85.6 bits (212), Expect = 8e-21
Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+ ++ + +P + ++ +AL ++ P +RLG++ G ++ H F+
Sbjct: 400 ELKQRVLE---QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
Query: 62 WDGLRNQTLTPPIIPVIKGP-----TDTSNFDRYSAENDIKGPTDTSNFDRYS 109
W L LTPP +P + D F + + DT F ++
Sbjct: 457 WRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFS--TVKGVAFEKADTEFFQEFA 507
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 82.8 bits (205), Expect = 6e-20
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
+ + + +P ++ SL+K L + +P +R + D++ +
Sbjct: 226 KEIVHTFET---TVVTYPSAWSQEMVSLLKKLLEPNPDQRFS----QLSDVQNFPYMNDI 278
Query: 61 DWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
+WD + + L P IP N D
Sbjct: 279 NWDAVFQKRLIPGFIP----NKGRLNCD 302
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 79.2 bits (196), Expect = 5e-19
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY-QRGGIVDIKKHKWFQG 59
+ II + FP+ A+ L++ L +RLG + G +K H +F+
Sbjct: 238 YLIFQKIIK---LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 294
Query: 60 FDWDGLRNQTLTPPIIP 76
W+ L Q TPP +
Sbjct: 295 VTWENLHQQ--TPPKLT 309
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 52.2 bits (126), Expect = 3e-09
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 14/80 (17%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
+T+ I+NV + FP ++ ++ LI L + P +RL + + +H W +
Sbjct: 218 TETHRRIVNV---DLKFPPFLSDGSKDLISKLLRYHPPQRL-----PLKGVMEHPWVKAN 269
Query: 61 DWDGLRNQTLTPPIIPVIKG 80
++ + PP+ +
Sbjct: 270 ------SRRVLPPVYQSTQS 283
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 51.1 bits (123), Expect = 8e-09
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
+TY I V + FP VT A+ LI L K +P++R + ++ +H W
Sbjct: 213 QETYKRISRV---EFTFPDFVTEGARDLISRLLKHNPSQRP-----MLREVLEHPWITAN 264
Query: 61 DWDGLRNQT 69
Q
Sbjct: 265 SSKPSNCQN 273
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 46.1 bits (110), Expect = 4e-07
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ-G 59
+TY I + PKH+ A SLI+ + + P R I ++ ++F G
Sbjct: 247 KETYLRIKKN---EYSIPKHINPVAASLIQKMLQTDPTARP-----TINELLNDEFFTSG 298
Query: 60 FDWDGLRNQTLT-PPIIPVIKGPTDTSNFDRYSAEN 94
+ L LT PP + D SN + N
Sbjct: 299 YIPARLPITCLTIPPRFSIAPSSLDPSNRKPLTVLN 334
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 42.9 bits (102), Expect = 5e-06
Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 8/58 (13%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
T N ++ P ++ A+ LI L + +PA+RL + + H +
Sbjct: 218 KNTLNKVVLA---DYEMPSFLSIEAKDLIHQLLRRNPADRL-----SLSSVLDHPFMS 267
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 42.3 bits (100), Expect = 1e-05
Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 10/113 (8%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
Q Y+ P+ K + +L+ + E+P+ R+ I DIKK +W+
Sbjct: 215 CQEYSDWKEKKTYLNPW-KKIDSAPLALLHKILVENPSARIT-----IPDIKKDRWYN-- 266
Query: 61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAEND 113
L+ P + + + + D S +
Sbjct: 267 --KPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVNSASRTPGSGWSKE 317
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 42.0 bits (99), Expect = 1e-05
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRN 67
++ +K +++PAER+ D KH+W + + LR
Sbjct: 290 CSNNFLSNEDIDFLKLFLRKNPAERIT-----SEDALKHEWLADTNIEDLRE 336
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 41.8 bits (99), Expect = 1e-05
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ-G 59
+TY I + PKH+ A SLI+ + + P R I ++ ++F G
Sbjct: 221 KETYLRIKKN---EYSIPKHINPVAASLIQKMLQTDPTARP-----TINELLNDEFFTSG 272
Query: 60 FDWDGLRNQTLT-PPIIPV 77
+ L LT PP +
Sbjct: 273 YIPARLPITCLTIPPRFSI 291
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 38.8 bits (91), Expect = 2e-04
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
+ + II+ +I FP + Q ++K K P +R+ I ++ H + Q
Sbjct: 246 ISKLHAIIDPN-HEIEFPDIPEKDLQDVLKCCLKRDPKQRI-----SIPELLAHPYVQ 297
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 38.3 bits (90), Expect = 2e-04
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
Q Y+ P+ K + +L+ + E+P+ R+ I DIKK +W+
Sbjct: 215 CQEYSDWKEKKTYLNPW-KKIDSAPLALLHKILVENPSARIT-----IPDIKKDRWYN 266
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 38.1 bits (89), Expect = 2e-04
Identities = 5/51 (9%), Positives = 15/51 (29%), Gaps = 5/51 (9%)
Query: 8 INVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
+ G F ++ +S++ + + P R + +
Sbjct: 264 LRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRA-----TAEALLALPVLR 309
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 37.8 bits (88), Expect = 3e-04
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
+ + II+ +I FP + Q ++K K P +R+ I ++ H + Q
Sbjct: 227 ISKLHAIIDPN-HEIEFPDIPEKDLQDVLKCCLKRDPKQRI-----SIPELLAHPYVQ 278
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 37.3 bits (86), Expect = 5e-04
Identities = 6/61 (9%), Positives = 22/61 (36%), Gaps = 12/61 (19%)
Query: 17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP 76
K++ + ++L++ + +RL + ++ + +T +P
Sbjct: 328 SCKNIPQPVRALLEGFLRYPKEDRLLPL-----QAMETPEYE-------QLRTELSAALP 375
Query: 77 V 77
+
Sbjct: 376 L 376
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 36.9 bits (86), Expect = 7e-04
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 9/61 (14%)
Query: 16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPII 75
P +++ ++L+K +P +R + I K +W G L P +
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRGT-----LEQIMKDRWINA----GHEEDELKPFVE 282
Query: 76 P 76
P
Sbjct: 283 P 283
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 36.7 bits (85), Expect = 8e-04
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
+ + II+ +I FP + Q ++K K P +R+ I ++ H + Q
Sbjct: 274 ISKLHAIIDPN-HEIEFPDIPEKDLQDVLKCCLKRDPKQRI-----SIPELLAHPYVQ 325
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 35.4 bits (82), Expect = 0.002
Identities = 9/55 (16%), Positives = 18/55 (32%), Gaps = 5/55 (9%)
Query: 16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTL 70
F + + + +I+ L P +R G + W D + + L
Sbjct: 251 DFDDNKMKVEKKIIRLLIDHDPNKRP-----GARTLLNSGWLPVKHQDEVIKEAL 300
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 35.3 bits (82), Expect = 0.002
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
PK ++ A LIK + +P R+ I +I + WF+
Sbjct: 231 LPKFLSPGAAGLIKRMLIVNPLNRIS-----IHEIMQDDWFK 267
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 35.0 bits (81), Expect = 0.003
Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Query: 8 INVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
I IP ++ LI + PA R+ I +IK H WF
Sbjct: 234 ILSVKYSIPDDIRISPECCHLISRIFVADPATRIS-----IPEIKTHSWFL 279
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 34.9 bits (81), Expect = 0.003
Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
P+++ R+ +L+ + + P +R I DI++H+WF+
Sbjct: 230 IPEYLNRSVATLLMHMLQVDPLKRAT-----IKDIREHEWFK 266
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 34.9 bits (81), Expect = 0.003
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 9/60 (15%)
Query: 17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP 76
P L+K + + PA+R I I++H WF+ PI P
Sbjct: 232 IPGDCGPPLSDLLKGMLEYEPAKRFS-----IRQIRQHSWFR----KKHPPAEAPVPIPP 282
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 34.9 bits (81), Expect = 0.003
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
P ++ AQSLI+ + P +R+ I +I++ WF
Sbjct: 227 MPDFLSPGAQSLIRRMIVADPMQRIT-----IQEIRRDPWFN 263
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 34.8 bits (80), Expect = 0.004
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
P+++ + SL+K + + P +R I DI++H+WF+
Sbjct: 235 TPQYLNPSVISLLKHMLQVDPMKRAT-----IKDIREHEWFK 271
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 34.2 bits (79), Expect = 0.005
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 10/53 (18%)
Query: 11 GIDKI-----PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
+I FP HV+ +LI+ P+ R + +I W Q
Sbjct: 241 RDQEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPS-----LEEILLDPWMQ 288
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 34.2 bits (79), Expect = 0.005
Identities = 6/58 (10%), Positives = 18/58 (31%), Gaps = 7/58 (12%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
+T + + + ++L++ L + P +R +I +
Sbjct: 222 FETSKFFTD--LRDGIISDIFDKKEKTLLQKLLSKKPEDRP-----NTSEILRTLTVW 272
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 34.3 bits (78), Expect = 0.006
Identities = 6/74 (8%), Positives = 26/74 (35%), Gaps = 12/74 (16%)
Query: 16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPII 75
K++ + ++L++ + +RL + + ++ + +T +
Sbjct: 331 RSCKNIPQPVRALLEGFLRYPKEDRL-----LPLQAMETPEYE-------QLRTELSAAL 378
Query: 76 PVIKGPTDTSNFDR 89
P+ + + +
Sbjct: 379 PLYQTDGEPTREGG 392
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 34.2 bits (79), Expect = 0.006
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Query: 17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
F + V+ Q LI+ P++R +I+ H W Q
Sbjct: 262 FRQRVSSECQHLIRWCLALRPSDRPT-----FEEIQNHPWMQD 299
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 33.5 bits (77), Expect = 0.010
Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 6/64 (9%)
Query: 14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF-QGFDWDGLRNQTLTP 72
I P V++ SL+ L + P +R + + W Q + + +
Sbjct: 240 AIHPPYLVSKELMSLVSGLLQPVPE-----RRTTLEKLVTDPWVTQPVNLADYTWEEVFR 294
Query: 73 PIIP 76
P
Sbjct: 295 VNKP 298
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 33.1 bits (76), Expect = 0.016
Identities = 6/57 (10%), Positives = 16/57 (28%), Gaps = 6/57 (10%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 57
+ + + + IP + L+ ++ P +R I +
Sbjct: 253 GDSVALAVQNQL-SIPQSPRHSSALWQLLNSMMTVDPHQRP-----HIPLLLSQLEA 303
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 31.1 bits (71), Expect = 0.059
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 6/58 (10%)
Query: 1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
M ++ I + + P + + LI + ++P R+ + +IK H W
Sbjct: 246 MCLHSKIKS-QALEFPDQPDIAEDLKDLITRMLDKNPESRIV-----VPEIKLHPWVT 297
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 30.4 bits (68), Expect = 0.12
Identities = 5/43 (11%), Positives = 10/43 (23%), Gaps = 5/43 (11%)
Query: 16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
+ ++LI RL + + F
Sbjct: 320 GSCTPLPDFVKTLIGRFLNFDRRRRLLPL-----EAMETPEFL 357
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 29.9 bits (68), Expect = 0.18
Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Query: 2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
+ + + +T A L+K + + P R + H+WF+
Sbjct: 232 EVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRP-----SAAQVLHHEWFK 283
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 29.7 bits (67), Expect = 0.19
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 10/80 (12%)
Query: 7 IINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLR 66
I+N G IP SLI+A+ + +P ERL I ++ + R
Sbjct: 261 IVN-GKYSIPPHDTQYTVFHSLIRAMLQVNPEERL-----SIAEVVHQLQ----EIAAAR 310
Query: 67 NQTLTPPIIPVIKGPTDTSN 86
N PI +++ +
Sbjct: 311 NVNPKSPITELLEQNGGYGS 330
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 29.2 bits (66), Expect = 0.35
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 12/89 (13%)
Query: 14 KIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
F K+V++ A+ LI+ L P +RL + ++ ++W Q D L +
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL-----KMSGLRYNEWLQ--DGSQLSSNP 284
Query: 70 LTPPIIPVIKGPTDTSNFDR-YSAENDIK 97
L P I G + + A N K
Sbjct: 285 LMTPDILGSSGAAVHTCVKATFHAFNKYK 313
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 28.9 bits (65), Expect = 0.39
Identities = 10/79 (12%), Positives = 29/79 (36%), Gaps = 13/79 (16%)
Query: 19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVI 78
K+++ A+ LIK + +R + + +W + + + N++ + +
Sbjct: 272 KNISDEAKELIKLMLTYDYNKRCTAE-----EALNSRWIKKYANNI--NKSDQKTLCGAL 324
Query: 79 KGPTDTSNFDRYSAENDIK 97
SN ++ +
Sbjct: 325 ------SNMRKFEGSQKLA 337
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 28.1 bits (63), Expect = 0.80
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 13/79 (16%)
Query: 19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVI 78
K V+ +A+ LI+ + P+ R+ + D H+W Q + + + P + I
Sbjct: 252 KKVSESAKDLIRKMLTYVPSMRISAR-----DALDHEWIQTYTKEQI--SVDVPSLDNAI 304
Query: 79 KGPTDTSNFDRYSAENDIK 97
N ++ +
Sbjct: 305 ------LNIRQFQGTQKLA 317
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 27.8 bits (62), Expect = 1.1
Identities = 8/46 (17%), Positives = 15/46 (32%), Gaps = 5/46 (10%)
Query: 14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
K + + A LI + P +R + + +H F
Sbjct: 261 KCLHDRSLIAEATDLISQMIDHDPLKRP-----TAMKVLRHPLFWP 301
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 27.5 bits (61), Expect = 1.1
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 6/62 (9%)
Query: 1 MQTYNMIINVGID-KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
T + ++N + + P ++ A+ L+ L + ER + +H W
Sbjct: 282 ADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERF-----DAMRALQHPWISQ 336
Query: 60 FD 61
F
Sbjct: 337 FS 338
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 27.3 bits (60), Expect = 1.5
Identities = 9/54 (16%), Positives = 15/54 (27%), Gaps = 9/54 (16%)
Query: 12 IDKIPFPKHVTRTAQSL----IKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
+P P H++ ++ + QRG FQ D
Sbjct: 257 SSVLPTPNHLSGILAGKLERWLQCMLMWHQR-----QRGTDPQNPNVGCFQALD 305
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 27.0 bits (60), Expect = 1.7
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 12/79 (15%)
Query: 19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVI 78
+ ++ A+ LI+ + P+ R+ +H W Q + TP I +
Sbjct: 247 RTISDDAKDLIRKMLTFHPSLRITAT-----QCLEHPWIQK-------YSSETPTISDLP 294
Query: 79 KGPTDTSNFDRYSAENDIK 97
+ +N ++ AE +
Sbjct: 295 SLESAMTNIRQFQAEKKLA 313
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 27.0 bits (60), Expect = 1.9
Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 12/79 (15%)
Query: 19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVI 78
K+V+ A+ LIK + + R+ Q +H W + + + P +
Sbjct: 262 KNVSEGAKDLIKQMLQFDSQRRISAQ-----QALEHPWIKEM--CSKKESGIELPSLANA 314
Query: 79 KGPTDTSNFDRYSAENDIK 97
N ++ +
Sbjct: 315 I-----ENMRKFQNSQKLA 328
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 26.9 bits (59), Expect = 1.9
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 10/42 (23%)
Query: 60 FDWDGLRNQTLTPPI-IPVIKGPTDTSNFDRYSAENDIKGPT 100
F + G+R P +P P+ S EN+ P+
Sbjct: 304 F-FIGVRCYEAYPNTSLP----PSIL----EDSLENNEGVPS 336
>3lu0_C DNA-directed RNA polymerase subunit beta; E. coli RNA polymerase,
nucleotidyltransferase, transcription, transferase;
11.20A {Escherichia coli} PDB: 3iyd_C*
Length = 1342
Score = 27.0 bits (60), Expect = 1.9
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 18/121 (14%)
Query: 7 IINVGID---KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD 63
+ V ID K+P A +++AL + + I +I+ +K +
Sbjct: 193 NLFVRIDRRRKLP--------ATIILRALNYTTEQILDLFFEKVIFEIRDNKLQMELVPE 244
Query: 64 GLRNQTLTPPI-----IPVIKGPTDTSNFDRYSAENDIKGPTDTSNF--DRYSAENDVPP 116
LR +T + I + V KG T+ R ++D+K + + A++ +
Sbjct: 245 RLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDVKLIEVPVEYIAGKVVAKDYIDE 304
Query: 117 D 117
Sbjct: 305 S 305
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 26.8 bits (60), Expect = 2.1
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 5/48 (10%)
Query: 19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLR 66
+ T + L+ P +R + H +FQ + + +R
Sbjct: 254 DDYSDTVKDLVSRFLVVQPQKRYT-----AEEALAHPFFQQYVVEEVR 296
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 26.5 bits (59), Expect = 2.3
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 9/50 (18%)
Query: 14 KIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
K FP H++ A+ LI L +RL + +H W QG
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRL-----SAAQVLQHPWVQG 301
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 26.5 bits (59), Expect = 2.8
Identities = 10/44 (22%), Positives = 14/44 (31%), Gaps = 5/44 (11%)
Query: 16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
V+ A L+K L P R + +H W Q
Sbjct: 242 EVWAEVSEKALDLVKKLLVVDPKARF-----TTEEALRHPWLQD 280
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 26.2 bits (58), Expect = 3.2
Identities = 13/52 (25%), Positives = 17/52 (32%), Gaps = 9/52 (17%)
Query: 14 KIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
K F V+ A L+K L P R + +H W Q D
Sbjct: 361 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARF-----TTEEALRHPWLQDED 407
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 26.0 bits (58), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
+V+ A+SLI+ L +SP +R+ +H+WF+
Sbjct: 232 LNVSPQAESLIRRLLTKSPKQRITSL-----QALEHEWFEK 267
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 26.1 bits (58), Expect = 3.9
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 9/52 (17%)
Query: 14 KIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
K V+ TA+ L+ + P +RL + +H W +D
Sbjct: 239 KFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRL-----TAALVLRHPWIVHWD 285
>1g8k_A Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, [2Fe-2S] rieske,
oxidoreductase; HET: MGD; 1.64A {Alcaligenes faecalis}
SCOP: b.52.2.2 c.81.1.1 PDB: 1g8j_A*
Length = 825
Score = 26.2 bits (58), Expect = 4.0
Identities = 7/27 (25%), Positives = 9/27 (33%)
Query: 38 AERLGYQRGGIVDIKKHKWFQGFDWDG 64
A L + F+GFDW
Sbjct: 571 ANALRDMYQKDGKAEMAAQFEGFDWKT 597
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding
protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Length = 337
Score = 25.7 bits (56), Expect = 4.4
Identities = 5/55 (9%), Positives = 10/55 (18%), Gaps = 6/55 (10%)
Query: 24 TAQSLIKALCKESPAERLG----YQRGGIVDIKKH--KWFQGFDWDGLRNQTLTP 72
LI+ P + +Q + K +
Sbjct: 28 KRLDLIEIARSYPPNQLRNMQRTFQAITGTFLDAFLKKHLSKDFESLVLMLYKPR 82
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 25.6 bits (56), Expect = 5.7
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 6/59 (10%)
Query: 1 MQTYNMIINVGIDKIPF-PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
M+ +I +V K P +++ + SP ER DI ++ F+
Sbjct: 277 MERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERP-----EATDIIENAIFE 330
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P;
1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB:
1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A*
1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A*
2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Length = 310
Score = 25.2 bits (56), Expect = 6.4
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 23 RTAQSLIKALCKESPAE 39
RT SL +AL K
Sbjct: 167 RTVHSLTQALAKFDGNR 183
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 25.1 bits (55), Expect = 7.6
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 9/50 (18%)
Query: 14 KIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
+ FP V+ + LI+ L K P +R+ I + H W
Sbjct: 283 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM-----TITEFMNHPWIMQ 327
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 24.9 bits (55), Expect = 8.3
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 9/50 (18%)
Query: 14 KIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
+ FP V+ + LI+ L K P +R+ I + H W
Sbjct: 218 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM-----TITEFMNHPWIMQ 262
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 25.0 bits (55), Expect = 8.3
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 9/50 (18%)
Query: 14 KIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
+ FP V+ A+ LI+ L K P ERL I H W
Sbjct: 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERL-----TITQFMNHPWINQ 293
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 25.1 bits (55), Expect = 9.0
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 5/43 (11%)
Query: 16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
P H + +SL+ L K +P +R + I + +
Sbjct: 244 PVSLHYSYDLRSLVSQLFKRNPRDRP-----SVNSILEKGFIA 281
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 25.0 bits (55), Expect = 9.2
Identities = 8/46 (17%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
P +++ + SP ER ++I ++ F+ D
Sbjct: 247 PLFTQKYPCEYVMVQDMLSPSPMERP-----EAINIIENAVFEDLD 287
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.137 0.433
Gapped
Lambda K H
0.267 0.0707 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,994,205
Number of extensions: 105670
Number of successful extensions: 351
Number of sequences better than 10.0: 1
Number of HSP's gapped: 309
Number of HSP's successfully gapped: 84
Length of query: 126
Length of database: 6,701,793
Length adjustment: 82
Effective length of query: 44
Effective length of database: 4,412,271
Effective search space: 194139924
Effective search space used: 194139924
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (23.5 bits)