BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3184
(185 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF ++P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DEPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 293 KNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 293 KNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 293 KNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 293 KNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 231 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 286
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 287 KNHKWFATTDWIAIYQRKVEAPFIP 311
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 223 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 278
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 279 KNHKWFATTDWIAIYQRKVEAPFIP 303
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 293 KNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 229 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 284
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 285 KNHKWFATTDWIAIYQRKVEAPFIP 309
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 229 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 284
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 285 KNHKWFATTDWIAIYQRKVEAPFIP 309
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 293 KNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 257 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 312
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 313 KNHKWFATTDWIAIYQRKVEAPFIP 337
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 293 KNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 293 KNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 257 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 312
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 313 KNHKWFATTDWIAIYQRKVEAPFIP 337
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 293 KNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 293 KNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 293 KNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 257 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 312
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 313 KNHKWFATTDWIAIYQRKVEAPFIP 337
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 222 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDI 277
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 278 KNHKWFATTDWIAIYQRKVEAPFIP 302
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 99 NDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 158
D +T MI+ K+ P+ ++ AQSL++ L K +PA RLG G+ +IK+H +F
Sbjct: 229 KDRKETMTMILKA---KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285
Query: 159 QGFDWDGLRNQTLTPPIIPVA 179
DW+ L + + PP P
Sbjct: 286 STIDWNKLYRREIHPPFKPAT 306
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 99 NDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 158
D +T MI+ K+ P+ ++ AQSL++ L K +PA RLG G+ +IK+H +F
Sbjct: 230 KDRKETMTMILKA---KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 286
Query: 159 QGFDWDGLRNQTLTPPIIP 177
DW+ L + + PP P
Sbjct: 287 STIDWNKLYRREIHPPFKP 305
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 99 NDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 158
D +T MI+ K+ P+ ++ AQSL++ L K +PA RLG G+ +IK+H +F
Sbjct: 229 KDRKETMTMILKA---KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285
Query: 159 QGFDWDGLRNQTLTPPIIP 177
DW+ L + + PP P
Sbjct: 286 STIDWNKLYRREIHPPFKP 304
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G + G+ DI
Sbjct: 237 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 292
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
HKWF DW + + + P IP
Sbjct: 293 XNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|3OCP|A Chain A, Crystal Structure Of Camp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OCP|B Chain B, Crystal Structure Of Camp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OD0|A Chain A, Crystal Structure Of Cgmp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OD0|B Chain B, Crystal Structure Of Cgmp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OGJ|A Chain A, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
pdb|3OGJ|B Chain B, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
pdb|3OGJ|C Chain C, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
pdb|3OGJ|D Chain D, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
Length = 139
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 41/56 (73%)
Query: 1 MDNDFLKNLDTLQVKEMVESMHQAEYKADNYVITEGEAGNDLFVSAEGEFQVIKDG 56
+DNDF+KNL+ Q++E+V+ M+ EY D+ +I EG+ G+ ++V +G+ +V K+G
Sbjct: 26 LDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEG 81
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + +R G G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 99 NDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 158
D +T +I+ K+ P+ ++ AQSL++AL K +PA RLG G +IK+H ++
Sbjct: 233 KDRKETMTLILKA---KLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFY 289
Query: 159 QGFDWDGLRNQTLTPPIIPVAS 180
DW+ L + + PP P +
Sbjct: 290 STIDWNKLYRREIKPPFKPAVA 311
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + P+Q Y I++ K+ FP H + + L++ L + + G + G+ DI
Sbjct: 236 PPFFA-DQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDI 291
Query: 153 KKHKWFQGFDWDGLRNQTLTPPIIP 177
K HKWF DW + + + P IP
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3SHR|A Chain A, Crystal Structure Of Cgmp-Dependent Protein Kinase
Reveals Novel Site Of Interchain Communication
pdb|3SHR|B Chain B, Crystal Structure Of Cgmp-Dependent Protein Kinase
Reveals Novel Site Of Interchain Communication
Length = 299
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 41/56 (73%)
Query: 1 MDNDFLKNLDTLQVKEMVESMHQAEYKADNYVITEGEAGNDLFVSAEGEFQVIKDG 56
+DNDF+KNL+ Q++E+V+ M+ EY D+ +I EG+ G+ ++V +G+ +V K+G
Sbjct: 42 LDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEG 97
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 116 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 175
+ +PK +++ A S+ K L + PA+RLG G D+++H +F+ DW+ L N+ + PP
Sbjct: 237 VSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPF 296
Query: 176 IP 177
P
Sbjct: 297 KP 298
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
IKDG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 161 IKDGATMKXFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEK 217
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ + A+SL+ L K+ P +RLG +I +H++F G W
Sbjct: 218 LFELIL---MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 274
Query: 164 DGLRNQTLTPPIIP 177
+ + L+PP P
Sbjct: 275 QHVYEKKLSPPFKP 288
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
IKDG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 160 IKDGATMKXFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEK 216
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ + A+SL+ L K+ P +RLG +I +H++F G W
Sbjct: 217 LFELIL---MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 273
Query: 164 DGLRNQTLTPPIIP 177
+ + L+PP P
Sbjct: 274 QHVYEKKLSPPFKP 287
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
IKDG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 162 IKDGATMKXFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEK 218
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ + A+SL+ L K+ P +RLG +I +H++F G W
Sbjct: 219 LFELIL---MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 275
Query: 164 DGLRNQTLTPPIIP 177
+ + L+PP P
Sbjct: 276 QHVYEKKLSPPFKP 289
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
IKDG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 303 IKDGATMKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEK 359
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ + A+SL+ L K+ P +RLG +I +H++F G W
Sbjct: 360 LFELIL---MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 416
Query: 164 DGLRNQTLTPPIIP 177
+ + L+PP P
Sbjct: 417 QHVYEKKLSPPFKP 430
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 116 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 175
+ +PK +++ A ++ K L + P +RLG G DIK+H +F+ DW+ L + + PP
Sbjct: 559 VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPY 618
Query: 176 IPVAS 180
P AS
Sbjct: 619 KPKAS 623
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
IKDG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 300 IKDGATMKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEK 356
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ + A+SL+ L K+ P +RLG +I +H++F G W
Sbjct: 357 LFELIL---MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 413
Query: 164 DGLRNQTLTPPIIP 177
+ + L+PP P
Sbjct: 414 QHVYEKKLSPPFKP 427
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 92 RPPFCVM----NDPMQTYNMIINVGIDK-IPFPKHVTRTAQSLIKALCKESPAERLG-YQ 145
R PF ++ N T + + V ++K I P+ ++ A S++K+ + P ERLG +
Sbjct: 203 RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHP 262
Query: 146 RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVAS 180
+ G DI+ H +F+ DWD + + + PP P S
Sbjct: 263 QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNIS 297
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 92 RPPFCVM----NDPMQTYNMIINVGIDK-IPFPKHVTRTAQSLIKALCKESPAERLG-YQ 145
R PF ++ N T + + V ++K I P+ ++ A S++K+ + P ERLG +
Sbjct: 250 RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHP 309
Query: 146 RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP 177
+ G DI+ H +F+ DWD + + + PP P
Sbjct: 310 QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 341
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 91 SRPPFCVM----NDPMQTYNMIINVGIDK-IPFPKHVTRTAQSLIKALCKESPAERLG-Y 144
R PF ++ N T + + V ++K I P+ ++ A S++K+ + P ERLG +
Sbjct: 206 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCH 265
Query: 145 QRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVAS 180
+ G DI+ H +F+ DWD + + + PP P S
Sbjct: 266 PQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNIS 301
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 116 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 175
+ +PK +++ A ++ K L + P +RLG G DIK+H +F+ DW+ L + + PP
Sbjct: 238 VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPY 297
Query: 176 IPVA 179
P A
Sbjct: 298 KPKA 301
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 89 IFSRPPFCVMNDPMQTYNMIINVGIDKIPFPKHVT---RTAQSLIKAL-CKESPAERLGY 144
++ PF ++TY I+N ++ FP HVT A+ LI+ L C S RLG
Sbjct: 291 LYGETPF-YAESLVETYGKIMN-HEERFQFPSHVTDVSEEAKDLIQRLIC--SRERRLG- 345
Query: 145 QRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVAS 180
+ GI D KKH +F+G +W+ +RN L P IP S
Sbjct: 346 -QNGIEDFKKHAFFEGLNWENIRN--LEAPYIPDVS 378
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 89 IFSRPPFCVMNDPMQTYNMIINVGIDKIPFPKHVT---RTAQSLIKAL-CKESPAERLGY 144
++ PF ++TY I+N ++ FP HVT A+ LI+ L C S RLG
Sbjct: 275 LYGETPF-YAESLVETYGKIMN-HEERFQFPSHVTDVSEEAKDLIQRLIC--SRERRLG- 329
Query: 145 QRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVAS 180
+ GI D KKH +F+G +W+ +RN L P IP S
Sbjct: 330 -QNGIEDFKKHAFFEGLNWENIRN--LEAPYIPDVS 362
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 92 RPPFCVM----NDPMQTYNMIINVGIDK-IPFPKHVTRTAQSLIKALCKESPAERLG-YQ 145
R PF ++ N T + + V ++K I P+ ++ A S++K+ + P ERLG
Sbjct: 218 RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAASVLKSFLNKDPKERLGCLP 277
Query: 146 RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP 177
+ G DI+ H +F+ DWD + + + PP P
Sbjct: 278 QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 309
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 89 IFSRPPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGG 148
I +R PF + ++ + V + +P + ++ +AL ++ P +RLG++ G
Sbjct: 383 IAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 149 IVDIKKHKWFQGFDWDGLRNQTLTPPIIP 177
++ H F+ W L LTPP +P
Sbjct: 443 CDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 89 IFSRPPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGG 148
I +R PF + ++ + V + +P + ++ +AL ++ P +RLG++ G
Sbjct: 383 IAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 149 IVDIKKHKWFQGFDWDGLRNQTLTPPIIP 177
++ H F+ W L LTPP +P
Sbjct: 443 CDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 89 IFSRPPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGG 148
I +R PF + ++ + V + +P + ++ +AL ++ P +RLG++ G
Sbjct: 383 IAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 149 IVDIKKHKWFQGFDWDGLRNQTLTPPIIP 177
++ H F+ W L LTPP +P
Sbjct: 443 CDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 89 IFSRPPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGG 148
I +R PF + ++ + V + +P + ++ +AL ++ P +RLG++ G
Sbjct: 383 IAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 149 IVDIKKHKWFQGFDWDGLRNQTLTPPIIP 177
++ H F+ W L LTPP +P
Sbjct: 443 CDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 89 IFSRPPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGG 148
++ PPF N + Y+ I+N + P ++T +A+ L++ L ++ +RLG +
Sbjct: 233 LYGLPPFYSRNT-AEMYDNILNKPLQLKP---NITNSARHLLEGLLQKDRTKRLG-AKDD 287
Query: 149 IVDIKKHKWFQGFDWDGLRNQTLTPPIIPVAS 180
++IK H +F +WD L N+ +TPP P S
Sbjct: 288 FMEIKSHVFFSLINWDDLINKKITPPFNPNVS 319
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 87 DNIFSRPPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR 146
D + PPF N +T + I+ K+ P ++T+ A+ L+K L K + A RLG
Sbjct: 213 DMLTGAPPFTGENRK-KTIDKILKC---KLNLPPYLTQEARDLLKKLLKRNAASRLGAGP 268
Query: 147 GGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV 178
G +++ H +F+ +W+ L + + PP P+
Sbjct: 269 GDAGEVQAHPFFRHINWEELLARKVEPPFKPL 300
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 87 DNIFSRPPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR 146
D + PPF N +T + I+ K+ P ++T+ A+ L+K L K + A RLG
Sbjct: 213 DMLTGAPPFTGENRK-KTIDKILKC---KLNLPPYLTQEARDLLKKLLKRNAASRLGAGP 268
Query: 147 GGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV 178
G +++ H +F+ +W+ L + + PP P+
Sbjct: 269 GDAGEVQAHPFFRHINWEELLARKVEPPFKPL 300
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 89 IFSRPPFCVMNDPMQTYNMIINVGIDKIPFPKHVT---RTAQSLIKAL-CKESPAERLGY 144
++ PF ++TY I+N ++ FP VT A+ LI+ L C S RLG
Sbjct: 275 LYGETPF-YAESLVETYGKIMNHK-ERFQFPTQVTDVSENAKDLIRRLIC--SREHRLG- 329
Query: 145 QRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVAS 180
+ GI D KKH +F G DWD +RN P IP S
Sbjct: 330 -QNGIEDFKKHPFFSGIDWDNIRN--CEAPYIPEVS 362
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
I DG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 161 ISDGATMKXFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHER 217
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ ++ A+SL+ L K+ P +RLG ++ +H++F +W
Sbjct: 218 LFELIL---MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 274
Query: 164 DGLRNQTLTPPIIP 177
+ + L PP P
Sbjct: 275 QDVVQKKLLPPFKP 288
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
I DG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 156 ISDGATMKXFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHER 212
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ ++ A+SL+ L K+ P +RLG ++ +H++F +W
Sbjct: 213 LFELIL---MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
Query: 164 DGLRNQTLTPPIIP 177
+ + L PP P
Sbjct: 270 QDVVQKKLLPPFKP 283
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
I DG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 156 ISDGATMKXFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHER 212
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ ++ A+SL+ L K+ P +RLG ++ +H++F +W
Sbjct: 213 LFELIL---MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
Query: 164 DGLRNQTLTPPIIP 177
+ + L PP P
Sbjct: 270 QDVVQKKLLPPFKP 283
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
I DG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 156 ISDGATMKXFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHER 212
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ ++ A+SL+ L K+ P +RLG ++ +H++F +W
Sbjct: 213 LFELIL---MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
Query: 164 DGLRNQTLTPPIIP 177
+ + L PP P
Sbjct: 270 QDVVQKKLLPPFKP 283
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
I DG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 159 ISDGATMKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHER 215
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ ++ A+SL+ L K+ P +RLG ++ +H++F +W
Sbjct: 216 LFELIL---MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 272
Query: 164 DGLRNQTLTPPIIP 177
+ + L PP P
Sbjct: 273 QDVVQKKLLPPFKP 286
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
I DG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 156 ISDGATMKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHER 212
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ ++ A+SL+ L K+ P +RLG ++ +H++F +W
Sbjct: 213 LFELIL---MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
Query: 164 DGLRNQTLTPPIIP 177
+ + L PP P
Sbjct: 270 QDVVQKKLLPPFKP 283
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 53 IKDGKILRLLSGRPPFC---VMNDPMQTYNMIIN------VGIDNIFSRPPFCVMNDPMQ 103
I DG ++ G P + V+ D Y ++ V + + R PF D +
Sbjct: 156 ISDGATMKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHER 212
Query: 104 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 163
+ +I+ +++I FP+ ++ A+SL+ L K+ P +RLG ++ +H++F +W
Sbjct: 213 LFELIL---MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
Query: 164 DGLRNQTLTPPIIP 177
+ + L PP P
Sbjct: 270 QDVVQKKLLPPFKP 283
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 117 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPII 176
P+P+ ++ A+ LI+ L + P +RLG +IK+H +FQ +WD L + + P
Sbjct: 284 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFK 343
Query: 177 PVASILRDE 185
PV +RDE
Sbjct: 344 PV---IRDE 349
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 99 NDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 158
++ M+TY I+N ++ FP + L+ L ++RLG + G D+K H WF
Sbjct: 206 SNTMKTYEKILNA---ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262
Query: 159 QGFDWDGLRNQTLTPPIIP 177
+ W+ L ++ + P P
Sbjct: 263 KEVVWEKLLSRNIETPYEP 281
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 89 IFSRPPFCVMNDPMQTYNMIINVGIDKIPFP---KHVTRTAQSLI-KALCKESPAERLGY 144
+ + PF + +TY I++ + + P + V A+ I + LC P RLG
Sbjct: 264 FYGQTPF-YADSTAETYGKIVHYK-EHLSLPLVDEGVPEEARDFIQRLLC--PPETRLG- 318
Query: 145 QRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP 177
RGG D + H +F G DWDGLR+ PP P
Sbjct: 319 -RGGAGDFRTHPFFFGLDWDGLRDS--VPPFTP 348
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 105 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLG-YQRGGIVDIKKHKWFQGFDW 163
+ I+N D++ +P + A ++K+ ++P RLG +GG I +H +F+ DW
Sbjct: 233 FEAILN---DEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDW 289
Query: 164 DGLRNQTLTPPIIP 177
L ++ + PP P
Sbjct: 290 AQLNHRQIEPPFRP 303
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 110 NVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQ 169
++ +D +P+ + + A+ L+ L P +RLG RG DI++H F+ +W+ L +
Sbjct: 230 SIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGV-RG---DIRQHPLFREINWEELERK 285
Query: 170 TLTPPIIP 177
+ PP P
Sbjct: 286 EIDPPFRP 293
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 110 NVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQ 169
++ +D +P+ + + A+ L+ L P +RLG RG DI++H F+ +W+ L +
Sbjct: 229 SIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGV-RG---DIRQHPLFREINWEELERK 284
Query: 170 TLTPPIIP 177
+ PP P
Sbjct: 285 EIDPPFRP 292
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 113 IDKIP--FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 170
+ ++P + + + A+SL L + PAERLG + G ++K+H F+ ++ L
Sbjct: 401 VKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGM 460
Query: 171 LTPPIIP 177
L PP P
Sbjct: 461 LEPPFKP 467
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 37.7 bits (86), Expect = 0.004, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 113 IDKIP--FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 170
+ ++P + + + A+SL L + PAERLG + G ++K+H F+ ++ L
Sbjct: 401 VKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGM 460
Query: 171 LTPPIIP 177
L PP P
Sbjct: 461 LEPPFKP 467
>pdb|2QVS|B Chain B, Crystal Structure Of Type Iia Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 310
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 30/49 (61%)
Query: 5 FLKNLDTLQVKEMVESMHQAEYKADNYVITEGEAGNDLFVSAEGEFQVI 53
KNLD Q+ +++++M + K D +VI +G+ G++ +V G + ++
Sbjct: 45 LFKNLDQEQLSQVLDAMFEKIVKTDEHVIDQGDDGDNFYVIERGTYDIL 93
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 116 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 175
+ P + +SL++ L + RLG G ++K+ +F+ DW + Q PP+
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
Query: 176 IP 177
IP
Sbjct: 471 IP 472
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 116 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 175
+ P + +SL++ L + RLG G ++K+ +F+ DW + Q PP+
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
Query: 176 IP 177
IP
Sbjct: 471 IP 472
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 116 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 175
+ P + +SL++ L + RLG G ++K+ +F+ DW + Q PP+
Sbjct: 410 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 469
Query: 176 IP 177
IP
Sbjct: 470 IP 471
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 116 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 175
+ P + +SL++ L + RLG G ++K+ +F+ DW + Q PP+
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
Query: 176 IP 177
IP
Sbjct: 471 IP 472
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 34.3 bits (77), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 209 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 264
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 265 LKAHPFFESVTWENLHQQ--TPP 285
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 207 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 262
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 263 LKAHPFFESVTWENLHQQ--TPP 283
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 214 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 269
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 270 LKAHPFFESVTWENLHQQ--TPP 290
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 230 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 285
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 286 LKAHPFFESVTWENLHQQ--TPP 306
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 232 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 287
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 288 LKAHPFFESVTWENLHQQ--TPP 308
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 208 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 263
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 264 LKAHPFFESVTWENLHQQ--TPP 284
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 229 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 284
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 285 LKAHPFFESVTWENLHQQ--TPP 305
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 229 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 284
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 285 LKAHPFFESVTWENLHQQ--TPP 305
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 230 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 285
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 286 LKAHPFFESVTWENLHQQ--TPP 306
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 210 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 265
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 266 LKAHPFFESVTWENLHQQ--TPP 286
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 230 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 285
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 286 LKAHPFFESVTWENLHQQ--TPP 306
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 233 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 288
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 289 LKAHPFFESVTWENLHQQ--TPP 309
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 230 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 285
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 286 LKAHPFFESVTWENLHQQ--TPP 306
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 233 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 288
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 289 LKAHPFFESVTWENLHQQ--TPP 309
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 232 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 287
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 288 LKAHPFFESVTWENLHQQ--TPP 308
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 232 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 287
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 288 LKAHPFFESVTWENLHQQ--TPP 308
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 232 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 287
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 288 LKAHPFFESVTWENLHQQ--TPP 308
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 237 PPFRAGNEYL-IFQKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 292
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 293 LKAHPFFESVTWENLHQQ--TPP 313
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 232 PPFRAGNEGL-IFAKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 287
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 288 LKAHPFFESVTWENLHQQ--TPP 308
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP+ A+ L++ L +RLG + G
Sbjct: 232 PPFRAGNEGL-IFAKIIKLEYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 287
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 288 LKAHPFFESVTWENLHQQ--TPP 308
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVD 151
PPF N+ + + II + D FP A+ L++ L +RLG + G
Sbjct: 235 PPFRAGNEYL-IFQKIIKLEYD---FPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGP 290
Query: 152 IKKHKWFQGFDWDGLRNQTLTPP 174
+K H +F+ W+ L Q TPP
Sbjct: 291 LKAHPFFESVTWENLHQQ--TPP 311
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 104 TYNMIINVGIDKIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG- 160
TY+ I+N + + FP +++ A++LI A + RLG R G+ +IK+H +F+
Sbjct: 281 TYSKIMN-HKNSLTFPDDNDISKEAKNLICAFLTDREV-RLG--RNGVEEIKRHLFFKND 336
Query: 161 -FDWDGLRNQTLTPPIIP 177
+ W+ LR+ P++P
Sbjct: 337 QWAWETLRDT--VAPVVP 352
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 104 TYNMIINVGIDKIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG- 160
TY+ I+N + + FP +++ A++LI A + RLG R G+ +IK+H +F+
Sbjct: 286 TYSKIMN-HKNSLTFPDDNDISKEAKNLICAFLTDREV-RLG--RNGVEEIKRHLFFKND 341
Query: 161 -FDWDGLRNQTLTPPIIP 177
+ W+ LR+ P++P
Sbjct: 342 QWAWETLRDT--VAPVVP 357
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 104 TYNMIINVGIDKIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG- 160
TY+ I+N + + FP +++ A++LI A + RLG R G+ +IK+H +F+
Sbjct: 286 TYSKIMN-HKNSLTFPDDNDISKEAKNLICAFLTDREV-RLG--RNGVEEIKRHLFFKND 341
Query: 161 -FDWDGLRNQTLTPPIIP 177
+ W+ LR+ P++P
Sbjct: 342 QWAWETLRDT--VAPVVP 357
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + +TY I+ V + FP V AQ LI L + +P+ERL + +
Sbjct: 219 PPFESASH-NETYRRIVKVDLK---FPASVPTGAQDLISKLLRHNPSERL-----PLAQV 269
Query: 153 KKHKWFQG 160
H W +
Sbjct: 270 SAHPWVRA 277
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Query: 104 TYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG- 160
TY+ I++ + + FP+ +++ A++LI A + RLG R G+ +IK+H +F+
Sbjct: 287 TYSKIMDHK-NSLCFPEDAEISKHAKNLICAFLTDREV-RLG--RNGVEEIKQHPFFKND 342
Query: 161 -FDWDGLRNQTLTPPIIPVAS 180
++WD +R P++P S
Sbjct: 343 QWNWDNIRET--AAPVVPELS 361
>pdb|3NZJ|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
pdb|3NZJ|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
pdb|3NZW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
pdb|3NZW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
pdb|3NZX|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
pdb|3NZX|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
pdb|4B4T|1 Chain 1, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
Length = 215
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 103 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 162
+ Y + + + K+P+ + + + I C ++ E + + VD KH Q
Sbjct: 128 EVYTIPLGGSVHKLPYA--IAGSGSTFIYGYCDKNFRENMSKEE--TVDFIKHSLSQAIK 183
Query: 163 WDGLRNQTLTPPIIPVASILR 183
WDG + ++ A + R
Sbjct: 184 WDGSSGGVIRMVVLTAAGVER 204
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 30.0 bits (66), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + +TY I V + FP VT A+ LI L K + ++RL + ++
Sbjct: 208 PPFEA-HTYQETYRRISRV---EFTFPDFVTEGARDLISRLLKHNASQRL-----TLAEV 258
Query: 153 KKHKWFQG 160
+H W +
Sbjct: 259 LEHPWIKA 266
>pdb|1VSY|H Chain H, Proteasome Activator Complex
pdb|1VSY|V Chain V, Proteasome Activator Complex
pdb|3L5Q|B Chain B, Proteasome Activator Complex
pdb|3L5Q|D Chain D, Proteasome Activator Complex
Length = 196
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 103 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 162
+ Y + + + K+P+ + + + I C ++ E + + VD KH Q
Sbjct: 109 EVYTIPLGGSVHKLPYA--IAGSGSTFIYGYCDKNFRENMSKEE--TVDFIKHSLSQAIK 164
Query: 163 WDGLRNQTLTPPIIPVASILR 183
WDG + ++ A + R
Sbjct: 165 WDGSSGGVIRMVVLTAAGVER 185
>pdb|1RYP|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
pdb|1RYP|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
Length = 205
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 103 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 162
+ Y + + + K+P+ + + + I C ++ E + + VD KH Q
Sbjct: 118 EVYTIPLGGSVHKLPYA--IAGSGSTFIYGYCDKNFRENMSKEE--TVDFIKHSLSQAIK 173
Query: 163 WDGLRNQTLTPPIIPVASILR 183
WDG + ++ A + R
Sbjct: 174 WDGSSGGVIRMVVLTAAGVER 194
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 93 PPFCVMNDPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI 152
PPF + +TY I V + FP VT A+ LI L K + ++RL + ++
Sbjct: 208 PPFEA-HTYQETYRRISRV---EFTFPDFVTEGARDLISRLLKHNASQRL-----TLAEV 258
Query: 153 KKHKWFQG 160
+H W +
Sbjct: 259 LEHPWIKA 266
>pdb|1G65|N Chain N, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
pdb|1G65|2 Chain 2, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
pdb|1G0U|N Chain N, A Gated Channel Into The Proteasome Core Particle
pdb|1G0U|2 Chain 2, A Gated Channel Into The Proteasome Core Particle
pdb|1FNT|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|1FNT|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|1JD2|N Chain N, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
pdb|1JD2|U Chain U, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
pdb|1Z7Q|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|1Z7Q|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|2F16|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
pdb|2F16|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
pdb|2FAK|N Chain N, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
pdb|2FAK|2 Chain 2, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
pdb|2GPL|N Chain N, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
pdb|2GPL|2 Chain 2, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
pdb|2ZCY|N Chain N, Yeast 20s Proteasome:syringolin A-Complex
pdb|2ZCY|1 Chain 1, Yeast 20s Proteasome:syringolin A-Complex
pdb|3BDM|N Chain N, Yeast 20s Proteasome:glidobactin A-Complex
pdb|3BDM|1 Chain 1, Yeast 20s Proteasome:glidobactin A-Complex
pdb|3D29|N Chain N, Proteasome Inhibition By Fellutamide B
pdb|3D29|2 Chain 2, Proteasome Inhibition By Fellutamide B
pdb|3E47|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
pdb|3E47|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
pdb|3DY3|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
pdb|3DY3|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
pdb|3DY4|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
pdb|3DY4|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
pdb|3GPJ|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
pdb|3GPJ|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
pdb|3GPT|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
pdb|3GPT|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
pdb|3GPW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
pdb|3GPW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
pdb|3HYE|N Chain N, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
pdb|3HYE|2 Chain 2, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
pdb|3MG4|N Chain N, Structure Of Yeast 20s Proteasome With Compound 1
pdb|3MG4|2 Chain 2, Structure Of Yeast 20s Proteasome With Compound 1
pdb|3MG0|N Chain N, Structure Of Yeast 20s Proteasome With Bortezomib
pdb|3MG0|2 Chain 2, Structure Of Yeast 20s Proteasome With Bortezomib
pdb|3MG6|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
pdb|3MG6|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
pdb|3MG7|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
pdb|3MG7|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
pdb|3MG8|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
pdb|3MG8|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
pdb|3OKJ|N Chain N, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
pdb|3OKJ|2 Chain 2, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
pdb|3OEU|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
pdb|3OEU|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
pdb|3OEV|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
pdb|3OEV|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
pdb|3TDD|N Chain N, Crystal Structure Of Yeast Cp In Complex With Belactosin C
pdb|3TDD|2 Chain 2, Crystal Structure Of Yeast Cp In Complex With Belactosin C
pdb|3SHJ|N Chain N, Proteasome In Complex With Hydroxyurea Derivative Hu10
pdb|3SHJ|2 Chain 2, Proteasome In Complex With Hydroxyurea Derivative Hu10
pdb|3UN4|N Chain N, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
pdb|3UN4|BB Chain b, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
pdb|3UN8|N Chain N, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
pdb|3UN8|BB Chain b, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
pdb|3SDI|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
pdb|3SDI|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
pdb|3SDK|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
pdb|3SDK|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
pdb|4GK7|N Chain N, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
pdb|4GK7|BB Chain b, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
pdb|4G4S|H Chain H, Structure Of Proteasome-Pba1-Pba2 Complex
pdb|4FZC|N Chain N, 20s Yeast Proteasome In Complex With Cepafungin I
pdb|4FZC|BB Chain b, 20s Yeast Proteasome In Complex With Cepafungin I
pdb|4FZG|N Chain N, 20s Yeast Proteasome In Complex With Glidobactin
pdb|4FZG|BB Chain b, 20s Yeast Proteasome In Complex With Glidobactin
pdb|4INR|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
pdb|4INR|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
pdb|4INT|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
pdb|4INT|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
pdb|4INU|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
pdb|4INU|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 196
Score = 29.6 bits (65), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 103 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 162
+ Y + + + K+P+ + + + I C ++ E + + VD KH Q
Sbjct: 109 EVYTIPLGGSVHKLPYA--IAGSGSTFIYGYCDKNFRENMSKEE--TVDFIKHSLSQAIK 164
Query: 163 WDGLRNQTLTPPIIPVASILR 183
WDG + ++ A + R
Sbjct: 165 WDGSSGGVIRMVVLTAAGVER 185
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 116 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 175
+ +P ++ SL+K L + +P +R + D++ + +WD + + L P
Sbjct: 237 VTYPSAWSQEMVSLLKKLLEPNPDQRFS----QLSDVQNFPYMNDINWDAVFQKRLIPGF 292
Query: 176 IP 177
IP
Sbjct: 293 IP 294
>pdb|1MHZ|D Chain D, Methane Monooxygenase Hydroxylase
pdb|1MHY|D Chain D, Methane Monooxygenase Hydroxylase
Length = 521
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 148 GIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVASILRDE 185
G+ + HKW Q F+WD N+T P +A+ +++
Sbjct: 17 GVEPQEVHKWLQSFNWDFKENRTKYPTKYHMANETKEQ 54
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 105 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 159
Y + N+G P L+K + + PA+R I I++H WF+
Sbjct: 219 YKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRF-----SIRQIRQHSWFR 268
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 22/76 (28%)
Query: 12 LQVKEMVESMHQAEYKAD----NYVITEGEAGNDLFVSAEGEFQVIKDG----------- 56
L+++E + +++ +YKAD N +IT G + F + +I DG
Sbjct: 69 LELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALS----SIIDDGDEVLIQNPCYP 124
Query: 57 ---KILRLLSGRPPFC 69
+R L +P FC
Sbjct: 125 CYKNFIRFLGAKPVFC 140
>pdb|1RL3|A Chain A, Crystal Structure Of Camp-free R1a Subunit Of Pka
pdb|1RL3|B Chain B, Crystal Structure Of Camp-free R1a Subunit Of Pka
pdb|1RGS|A Chain A, Regulatory Subunit Of Camp Dependent Protein Kinase
Length = 288
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/49 (20%), Positives = 28/49 (57%)
Query: 6 LKNLDTLQVKEMVESMHQAEYKADNYVITEGEAGNDLFVSAEGEFQVIK 54
L++LD + + +++ +++ ++ +GE G++ F+ EG V++
Sbjct: 163 LESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQ 211
>pdb|1NE4|A Chain A, Crystal Structure Of Rp-Camp Binding R1a Subunit Of Camp-
Dependent Protein Kinase
pdb|1NE6|A Chain A, Crystal Structure Of Sp-Camp Binding R1a Subunit Of Camp-
Dependent Protein Kinase
Length = 283
Score = 26.6 bits (57), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/49 (20%), Positives = 28/49 (57%)
Query: 6 LKNLDTLQVKEMVESMHQAEYKADNYVITEGEAGNDLFVSAEGEFQVIK 54
L++LD + + +++ +++ ++ +GE G++ F+ EG V++
Sbjct: 161 LESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQ 209
>pdb|2QCS|B Chain B, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
Length = 291
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 10/49 (20%), Positives = 28/49 (57%)
Query: 6 LKNLDTLQVKEMVESMHQAEYKADNYVITEGEAGNDLFVSAEGEFQVIK 54
L++LD + + +++ +++ ++ +GE G++ F+ EG V++
Sbjct: 165 LESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQ 213
>pdb|3TQF|A Chain A, Structure Of The Hpr(Ser) KinasePHOSPHATASE FROM COXIELLA
BURNETII
pdb|3TQF|B Chain B, Structure Of The Hpr(Ser) KinasePHOSPHATASE FROM COXIELLA
BURNETII
Length = 181
Score = 26.6 bits (57), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 100 DPMQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY 144
+P+ +I+ + + KI FP H R LI+ L + + GY
Sbjct: 115 NPLYRTEIILGINVPKILFPIHPGRNLPLLIETLVRNHRLKXEGY 159
>pdb|4DIN|B Chain B, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 381
Score = 26.6 bits (57), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 3 NDFLKNLDTLQVKEMVESMHQAEYKADNYVITEGEAGNDLFVSAEGEFQVIKDGK 57
N +LD + ++ ++M + A VI +G G++ +V +GE V +G+
Sbjct: 135 NVLFAHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYVNGE 189
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 9/50 (18%), Positives = 28/50 (56%)
Query: 5 FLKNLDTLQVKEMVESMHQAEYKADNYVITEGEAGNDLFVSAEGEFQVIK 54
L++L+ + + +++ +++ ++ +GE G+D ++ EG V++
Sbjct: 255 ILESLEKWERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQ 304
>pdb|3PVB|B Chain B, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 160
Score = 26.6 bits (57), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 3 NDFLKNLDTLQVKEMVESMHQAEYKADNYVITEGEAGNDLFVSAEGEFQV 52
N +LD + ++ ++M + A VI +G+ G++ +V +GE V
Sbjct: 50 NVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDV 99
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,764,206
Number of Sequences: 62578
Number of extensions: 229734
Number of successful extensions: 676
Number of sequences better than 100.0: 148
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 552
Number of HSP's gapped (non-prelim): 153
length of query: 185
length of database: 14,973,337
effective HSP length: 93
effective length of query: 92
effective length of database: 9,153,583
effective search space: 842129636
effective search space used: 842129636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)