BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3185
(298 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80UY1|CI041_MOUSE UPF0586 protein C9orf41 homolog OS=Mus musculus PE=2 SV=1
Length = 400
Score = 333 bits (854), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 161/297 (54%), Positives = 205/297 (69%), Gaps = 2/297 (0%)
Query: 2 KVKRNEQYLESLPEKHQKLLSKYKDHLNDLKSCIDKNYEIIKLIIKDVGVMFENVPSSEP 61
+V R E+ SLPE QKLL ++ HL+ ++ CID N EI+ I+ D MFEN E
Sbjct: 74 RVNRTERQFRSLPENQQKLLPQFPLHLDKIRKCIDHNQEILLTIVNDCIHMFENKEYGED 133
Query: 62 IKLISPLPNST-DLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKD 120
+P ST D++K+++TLKQFVRDWSE G ER CY+PII EI+ FP E +P
Sbjct: 134 ANG-KIMPASTFDMDKLKSTLKQFVRDWSETGKAERDACYKPIIKEIIKNFPKERWDPSK 192
Query: 121 VNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTD 180
VNILVPGAGLGRLA+E+A GY CQGNE+S FMLF+SNF+LN+C E N YK+YPW+ Q
Sbjct: 193 VNILVPGAGLGRLAWEVAMLGYACQGNEWSFFMLFSSNFVLNRCSEINKYKLYPWIHQFS 252
Query: 181 NNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNI 240
NN + Q + FPD++ +FSM AGDF ++Y N WDC+ATCFFID A+N+
Sbjct: 253 NNRRSADQIRPILFPDVDPHSLPPGSNFSMTAGDFQEIYSECNAWDCIATCFFIDTAHNV 312
Query: 241 VSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297
+ +I+TI+ ILKPGGIWINLGPLLYH+ N+ NE SIE SYE +K V+ GF EVE
Sbjct: 313 IDYIDTIWRILKPGGIWINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFQLEVE 369
>sp|Q8N4J0|CI041_HUMAN UPF0586 protein C9orf41 OS=Homo sapiens GN=C9orf41 PE=1 SV=1
Length = 409
Score = 331 bits (849), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/297 (54%), Positives = 204/297 (68%), Gaps = 2/297 (0%)
Query: 2 KVKRNEQYLESLPEKHQKLLSKYKDHLNDLKSCIDKNYEIIKLIIKDVGVMFENVPSSEP 61
+V R E+ SLP QKLL ++ HL+ ++ CID N EI+ I+ D MFEN E
Sbjct: 83 RVNRTERQFRSLPANQQKLLPQFLLHLDKIRKCIDHNQEILLTIVNDCIHMFENKEYGED 142
Query: 62 IKLISPLPNST-DLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKD 120
+P ST D++K+++TLKQFVRDWSE G ER CY+PII EIL FP E +P
Sbjct: 143 GNG-KIMPASTFDMDKLKSTLKQFVRDWSETGKAERDACYQPIIKEILKNFPKERWDPSK 201
Query: 121 VNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTD 180
VNILVPGAGLGRLA+EIA GY CQGNE+S FMLF+SNF+LN+C E N YK+YPW+ Q
Sbjct: 202 VNILVPGAGLGRLAWEIAMLGYACQGNEWSFFMLFSSNFVLNRCSEINKYKLYPWIHQFS 261
Query: 181 NNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNI 240
NN + Q + FPD++ +FSM AGDF ++Y N WDC+ATCFFID A+N+
Sbjct: 262 NNRRSADQIRPIFFPDVDPHSLPPGSNFSMTAGDFQEIYSECNTWDCIATCFFIDTAHNV 321
Query: 241 VSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297
+ +I+TI+ ILKPGGIWINLGPLLYH+ N+ NE SIE SYE +K V+ GF EVE
Sbjct: 322 IDYIDTIWKILKPGGIWINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFKVEVE 378
>sp|Q5BJZ6|CI041_RAT UPF0586 protein C9orf41 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 400
Score = 327 bits (839), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 158/297 (53%), Positives = 204/297 (68%), Gaps = 2/297 (0%)
Query: 2 KVKRNEQYLESLPEKHQKLLSKYKDHLNDLKSCIDKNYEIIKLIIKDVGVMFENVPSSEP 61
+V R E+ SLP+ QKLL ++ HL+ ++ C+D N EI+ I+ D MFEN E
Sbjct: 74 RVNRTERQFRSLPDNQQKLLPQFPLHLDKIRKCVDHNQEILLTIVNDCIHMFENKEYGED 133
Query: 62 IKLISPLPNST-DLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKD 120
+P ST D++K+++TLKQFVRDWS G ER CY+PII EI+ FP E +P
Sbjct: 134 ANG-KIMPASTFDMDKLKSTLKQFVRDWSGTGKAERDACYKPIIKEIIKNFPKERWDPSK 192
Query: 121 VNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTD 180
VNILVPGAGLGRLA+EIA GY CQGNE+S FMLF+SNF+LN+C E + YK+YPW+ Q
Sbjct: 193 VNILVPGAGLGRLAWEIAMLGYACQGNEWSFFMLFSSNFVLNRCSEVDKYKLYPWIHQFS 252
Query: 181 NNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNI 240
NN + Q + FPD++ +FSM AGDF ++Y N WDC+ATCFFID A+N+
Sbjct: 253 NNRRSADQIRPIFFPDVDPHSLPPGSNFSMTAGDFQEIYSECNTWDCIATCFFIDTAHNV 312
Query: 241 VSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297
+ +I+TI+ ILKPGGIWINLGPLLYH+ N+ NE SIE SYE +K V+ GF EVE
Sbjct: 313 IDYIDTIWRILKPGGIWINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFQLEVE 369
>sp|Q9I7X6|U586_DROME UPF0586 protein CG11596 OS=Drosophila melanogaster GN=CG11596 PE=1
SV=1
Length = 439
Score = 296 bits (758), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/296 (47%), Positives = 199/296 (67%), Gaps = 2/296 (0%)
Query: 2 KVKRNEQYLESLPEKHQKLLSKYKDHLNDLKSCIDKNYEIIKLIIKDVGVMFENVPSSEP 61
++KR+ YL SL + Q +L+KY+ HL +++CID+N +I+ I++ + + + +P
Sbjct: 51 RLKRSMDYLNSLSGEDQIMLAKYRGHLECVRTCIDRNQAVIREILRGRVLYPTDEATGDP 110
Query: 62 IKLISPLPN--STDLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPK 119
+ P PN D+++ Q+TLK RDWS EG+ ER+ Y+PII I+A F K
Sbjct: 111 SEFDEPPPNVRHGDMDQAQSTLKLIARDWSTEGALEREQSYKPIIDSIVAYFKHSDFELK 170
Query: 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179
D+ ILVPGAGLGRL +E+A GY C+GNEFS FML ASNF+LN C +N Y +YPWV Q
Sbjct: 171 DIKILVPGAGLGRLTYELACLGYSCEGNEFSYFMLIASNFVLNLCDNENKYVLYPWVHQY 230
Query: 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANN 239
NN+ Q V FPD+ F +AAGDFL+VY PN ++CVATCFFIDCANN
Sbjct: 231 VNNLRREDQVAPVRFPDVCPLKNPPKGHFEIAAGDFLEVYKTPNAYNCVATCFFIDCANN 290
Query: 240 IVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYE 295
++ FI TI+ IL PGGIW+NLGPLLYH+S++ ++SIEP++E + +++ +GFV E
Sbjct: 291 VIDFIRTIYKILVPGGIWVNLGPLLYHFSDVSGQNSIEPAFEDLCIIMESVGFVIE 346
>sp|Q9Y7J3|YOI7_SCHPO UPF0586 protein C1778.07 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC1778.07 PE=3 SV=1
Length = 373
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 179/309 (57%), Gaps = 24/309 (7%)
Query: 3 VKRNEQYLESLPEKHQKLLSKYKD-----HLNDLKSCIDKNYEIIKLII-KDVGVMFENV 56
++ + + L +H+ LL + D HL+ + CI++N + + I + V +
Sbjct: 29 TQQKRKSMSRLSFEHKDLLLQDSDNNFLKHLSRIDQCIEQNSVLAEAIANAAIPVFCSDF 88
Query: 57 PSSEPIKLISPLPNSTDLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETI 116
+E + N ++KV +TLKQ RDWS E EER+T Y P I E+ + FP ++I
Sbjct: 89 DQNELFHV-----NVDMMQKVSSTLKQIARDWSTECVEERRTTYAPFIEELNSLFPSDSI 143
Query: 117 NPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWV 176
+ + +LVPG+GLGRLAF+IA G+ CQGNEFS FML S+FILN +++N + +YP++
Sbjct: 144 DRSKIRVLVPGSGLGRLAFDIAVEGFACQGNEFSYFMLLTSHFILNCVKQENQFLVYPYI 203
Query: 177 QQTDNNILTHHQTMAVTFPDINTSDY-NDDCDFSMAAGDFLQVYVHPNKWDC---VATCF 232
N+++ Q ++ PD S Y + +FSMAAGDFL+VY D VATCF
Sbjct: 204 HSFSNHVMRDDQVRSLNIPDAVPSQYLRNSQNFSMAAGDFLEVYGTEESRDSFQVVATCF 263
Query: 233 FIDCANNIVSFIETIFNILKPGGIWINLGPLLYHY----SNMLNEDS-----IEPSYEVV 283
FID NI+ +++TI N L GG WINLGPLLYH+ ++ N DS +E + E +
Sbjct: 264 FIDTTKNILDYLDTIKNCLVDGGYWINLGPLLYHFESEGTSNSNSDSQQQPFVELTLEQL 323
Query: 284 KQVIQGLGF 292
V+ +GF
Sbjct: 324 FYVMDSMGF 332
>sp|Q54ST2|U586_DICDI UPF0586 protein OS=Dictyostelium discoideum GN=DDB_G0282239 PE=3
SV=1
Length = 463
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 170/298 (57%), Gaps = 16/298 (5%)
Query: 13 LPEKHQKLLSKYKDHLNDLKSCIDKNYEIIKLIIKDVGVMF----ENVPSSE----PIKL 64
L E +KLL Y + L + N + +K I + +F +N +SE P L
Sbjct: 137 LSEDEKKLLPNYNAKMEALARAVLVNSQFLKKIGNEHCNIFSQSSDNSANSERIVDPTNL 196
Query: 65 ISPLPNSTDLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKD-VNI 123
+ ++++++T++Q VR+WSEEG ER +EPI ++L + + + +
Sbjct: 197 DHIKIDYFMMDQLKSTIRQLVREWSEEGKLERDQAFEPIKQQLLEIYGHIPFQERSKIRV 256
Query: 124 LVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNI 183
PGAGLGRL EIA G+ QG E+S ML SNF+LNK + N +KI+P++ QT N +
Sbjct: 257 YSPGAGLGRLCLEIASLGFSSQGIEYSFMMLIVSNFMLNKVEKINEFKIHPYIHQTVNVL 316
Query: 184 LTHHQTMAVTFPDINTSDY----NDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANN 239
Q VT PD+ +S+ N +FSM+AGDF + + N +DC+ TCFFID A N
Sbjct: 317 RDIDQLRTVTIPDVLSSELLPKNNPALEFSMSAGDFTK-NIEENSFDCICTCFFIDTAPN 375
Query: 240 IVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297
I+ +++ I ILKPGG WIN GPLLYH++ +DSIE SYE ++ +I F ++ E
Sbjct: 376 ILEYVDCISKILKPGGTWINFGPLLYHHAK--KKDSIELSYEQLRYLICKKQFQFKKE 431
>sp|P53934|YNJ2_YEAST UPF0586 protein YNL092W OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YNL092W PE=1 SV=1
Length = 400
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 43/297 (14%)
Query: 12 SLPEKHQKLLSKYKDHLNDLKSCIDKNYEIIKLIIKDVGVMFENVPSSEPIKLISPLPNS 71
S+ ++ + ++ Y +L +LK+ I +N + + + + +++ S EP +++ P N
Sbjct: 43 SISDRQKDMVPNYTKYLANLKAAIIENGKFFRSVAE---YALQSI-SFEPGEIVQP--ND 96
Query: 72 TDLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPP--ETINPKDVNILVPGAG 129
D+ K + L Q R+WS E ER + +R P +T++P +IL+PG G
Sbjct: 97 LDMSKTCSLLTQVYREWSAEAISERNC--------LNSRLVPFLKTLSPPKADILIPGCG 148
Query: 130 LGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQT 189
GRL +++R GY C+GNEFS ML S ++LN +N IYP++ + Q
Sbjct: 149 TGRLLVDLSRMGYNCEGNEFSYHMLLVSQYMLNAGLLQNQIIIYPFIHCFSHWKKIEDQL 208
Query: 190 MAVTFPDINTSDYNDDC-DFSMAAGDFLQVYVH-----------------------PNKW 225
+ PDI N S+ AG F+ Y N
Sbjct: 209 SPIKVPDIEAWSSNKGMGSMSICAGSFVDCYGRNQGTKISSHYTFSRRMQLSRAKAENSK 268
Query: 226 DCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEV 282
D V T FFID +NI+ +++TI ++LKPGGIW N GPLLYH+ N+ +E +YEV
Sbjct: 269 DVVVTNFFIDTGSNILDYLDTIGHVLKPGGIWCNFGPLLYHFE---NDHGVETTYEV 322
>sp|Q03648|YM59_YEAST Uncharacterized protein YMR209C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YMR209C PE=1 SV=1
Length = 457
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 77 VQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKDVN----ILVPGAGLGR 132
V L RD+S S ER +P+ + I++R I+ D+ I+ PGAG+G
Sbjct: 206 VHEALAHLCRDFSSYYSVER----DPLQNFIISRINHHVISAGDMKEKILIVTPGAGVGG 261
Query: 133 LAFEIARRGYVCQGN--EFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTM 190
L+ +A Q + E S M + F L K+ KI P+VQQ + +Q
Sbjct: 262 LSHTLATTFPKIQVDSIELSALMYICNLFALEY---KHDVKIRPFVQQYSCQTVFDNQLR 318
Query: 191 AVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC--FFIDCANNIVSFIETIF 248
+++ D++ + + D GDF + +D + C +FID A N+ ++ +I
Sbjct: 319 SLS-ADLSKVGHRSNLD--PLWGDFTRYSPISKDYDKIIICSAYFIDTAENMFEYLSSIE 375
Query: 249 NILK--PGGIWINLGPLLY 265
+ K W+N+GPL Y
Sbjct: 376 ALKKYCKELHWVNVGPLKY 394
>sp|Q54I98|SMT1_DICDI Probable cycloartenol-C-24-methyltransferase 1 OS=Dictyostelium
discoideum GN=smt1 PE=1 SV=1
Length = 354
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 206 CDFSMAAGDFLQVYVHPNKWDCV----ATCFFIDCANNIVSFIETIFNILKPGGIWINLG 261
C F A DF+ V V N +DC ATC A ++V + +F I+KPGG++ G
Sbjct: 163 CSFIKA--DFMHVPVEDNTYDCAYQIEATCH----APDLVGLYKEVFRIVKPGGLF---G 213
Query: 262 PLLYHYSNMLN-EDSIEPSYEVVKQVIQGLGF 292
+ +N N ED +E + + KQ+ G G
Sbjct: 214 GYEWIMTNKFNPEDPVEVN--IKKQIELGNGL 243
>sp|C4R5P7|CCM1_PICPG Mitochondrial group I intron splicing factor CCM1 OS=Komagataella
pastoris (strain GS115 / ATCC 20864) GN=CCM1 PE=3 SV=1
Length = 725
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 196 DINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIF----NIL 251
DI T DYN D D + G+ +Q P + D ++N +E N+
Sbjct: 91 DIITDDYNLDSDVDLVFGELMQAEEQPKSLKSLPGAS--DASDNTDKSVELFSFPSPNLT 148
Query: 252 KPGGIWINLGPLLYHYSN 269
P + ++GPL+ H SN
Sbjct: 149 LPEKVIHHIGPLVKHISN 166
>sp|O74198|ERG6_CANAL Sterol 24-C-methyltransferase OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=ERG6 PE=3 SV=1
Length = 376
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 202 YNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIW 257
Y+ D S GDF+Q+ P +D V A + I+ +LKPGGI+
Sbjct: 168 YHLDHKLSYVKGDFMQMDFEPESFDAVYAIEATVHAPVLEGVYSEIYKVLKPGGIF 223
>sp|Q6FRZ7|ERG6_CANGA Sterol 24-C-methyltransferase OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ERG6
PE=3 SV=1
Length = 372
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 204 DDCDFSMAAGDFLQVYVHPNKWDCV----ATCFFIDCANNIVSFIETIFNILKPGGIWIN 259
D DF GDF+ + PN +D V ATC A + I+ +LKPGG +
Sbjct: 169 DHMDF--VKGDFMNMEFEPNSFDKVYAIEATCH----APKLEGVYGEIYKVLKPGGTFAV 222
Query: 260 LGPLLYHYSNMLNEDSIEPSYE--------------VVKQVIQGLGFVYEV 296
++ + NE+ + +YE V KQ ++ +GF EV
Sbjct: 223 YEWVMTENYDENNEEHRKIAYEIELGDGIPKMFTVDVAKQALKNVGFEVEV 273
>sp|Q60952|CP250_MOUSE Centrosome-associated protein CEP250 OS=Mus musculus GN=Cep250 PE=1
SV=4
Length = 2414
Score = 33.5 bits (75), Expect = 1.8, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 8 QYLESLPEKHQKLLSKYKDHLNDLKSCIDKNYEIIKLIIKDVGVMFENVPSSEPIKLISP 67
Q +SL ++ Q+ + + L +L+ + + E I ++ + +P+ +P + P
Sbjct: 2061 QEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPAEKPA--LQP 2118
Query: 68 LPNSTDLEKVQTTLKQ 83
LP +LE++QT L+Q
Sbjct: 2119 LPAQQELERLQTALRQ 2134
>sp|Q8EXJ3|UBIE_LEPIN Demethylmenaquinone methyltransferase OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
GN=ubiE PE=3 SV=1
Length = 249
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 223 NKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL 260
+++D V+ F + +N+ I IF +LKPGG+++NL
Sbjct: 125 SQFDVVSIGFGLRNVDNLSKAIGEIFRVLKPGGMFLNL 162
>sp|Q75FL1|UBIE_LEPIC Demethylmenaquinone methyltransferase OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar copenhageni
(strain Fiocruz L1-130) GN=ubiE PE=3 SV=1
Length = 249
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 223 NKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL 260
+++D V+ F + +N+ I IF +LKPGG+++NL
Sbjct: 125 SQFDVVSIGFGLRNVDNLSKAIGEIFRVLKPGGMFLNL 162
>sp|Q875K1|ERG6_CLAL4 Sterol 24-C-methyltransferase OS=Clavispora lusitaniae (strain ATCC
42720) GN=ERG6 PE=3 SV=1
Length = 375
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 202 YNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLG 261
Y D S GDF+Q+ P +D V A + I+ +LKPGG++
Sbjct: 168 YKLDDKLSYVKGDFMQMDFEPESFDAVYAIEATVHAPVLEGVYSEIYKVLKPGGVFGVYE 227
Query: 262 PLLYHYSNMLNEDSIEPSY--------------EVVKQVIQGLGFVYEVE 297
++ + NE+ + +Y EV +Q ++ +GF E E
Sbjct: 228 WVMTDKYDENNEEHRKIAYGIEVGDGIPKMYKREVAEQALKNVGFDIEYE 277
>sp|Q6MNQ3|RNY1_BDEBA Ribonuclease Y 1 OS=Bdellovibrio bacteriovorus (strain ATCC 15356 /
DSM 50701 / NCIB 9529 / HD100) GN=rny1 PE=3 SV=1
Length = 521
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 2 KVKRNEQYLESLPEKHQKLLSKYKDHLNDLKSCIDKNYEIIKLIIKDVGVMFENVPSSEP 61
K++ NE+YL SL ++ +K ++ ++ + DL+ + + +K ++ V M ++ +
Sbjct: 102 KMEENERYLNSLKDREEK-IAISENRIKDLEKKGEAHIGELKQKLESVAAMSQDEARRQ- 159
Query: 62 IKLISPLPNSTDLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKDV 121
L++ L + E + + EE ++E + + I++ L+RF E + + V
Sbjct: 160 --LLTALEDEAKQEAAKK-----IAQIEEEANKESEKKAKRILATALSRFASEYTSERTV 212
Query: 122 NILV 125
++L
Sbjct: 213 SVLA 216
>sp|A7H2G9|RNY_CAMJD Ribonuclease Y OS=Campylobacter jejuni subsp. doylei (strain ATCC
BAA-1458 / RM4099 / 269.97) GN=rny PE=3 SV=1
Length = 517
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 22/134 (16%)
Query: 8 QYLESLPEKHQKL-------------LSKYKDHLNDLKSCIDKNYEIIKLIIKDVGVMFE 54
Q L+ L +K QKL L K + H+ DL+S +DK + + DV + E
Sbjct: 83 QKLDDLFKKEQKLQQEEEKLKEDKEYLCKSQKHIQDLQSDVDKLKNKYQEKLDDVLKILE 142
Query: 55 NVPSSEPIKLISPLPNSTDLEKVQTTLKQ----FVRDWSEEGSEERKTCYEPIISEILAR 110
+ +L L+KV+ ++ VR + EE E K II++ +R
Sbjct: 143 H-----STRLTQNEAKEIILKKVEENSREQIAHIVRKYEEEAKNEAKRKANFIIAQATSR 197
Query: 111 FPPETINPKDVNIL 124
F E + +N++
Sbjct: 198 FAGEFAAERLINVI 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,037,029
Number of Sequences: 539616
Number of extensions: 4988670
Number of successful extensions: 14578
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 14540
Number of HSP's gapped (non-prelim): 41
length of query: 298
length of database: 191,569,459
effective HSP length: 117
effective length of query: 181
effective length of database: 128,434,387
effective search space: 23246624047
effective search space used: 23246624047
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)