Query psy3185
Match_columns 298
No_of_seqs 278 out of 1502
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 18:29:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pjz_A Thiopurine S-methyltran 99.8 1.7E-20 5.8E-25 163.2 13.3 148 119-296 22-172 (203)
2 3l8d_A Methyltransferase; stru 99.8 1E-19 3.6E-24 160.2 17.0 174 76-297 15-197 (242)
3 2p7i_A Hypothetical protein; p 99.8 1.8E-19 6E-24 158.4 16.3 148 99-297 29-196 (250)
4 3h2b_A SAM-dependent methyltra 99.8 4.1E-19 1.4E-23 152.8 15.3 134 120-297 42-179 (203)
5 4htf_A S-adenosylmethionine-de 99.8 1.2E-18 4.2E-23 157.9 18.4 140 120-297 69-229 (285)
6 2gb4_A Thiopurine S-methyltran 99.8 5.3E-19 1.8E-23 159.5 15.5 148 119-296 68-223 (252)
7 3ou2_A SAM-dependent methyltra 99.8 1.1E-18 3.7E-23 150.9 16.8 134 119-296 46-201 (218)
8 3g5l_A Putative S-adenosylmeth 99.8 9.3E-19 3.2E-23 155.7 16.6 146 105-296 34-212 (253)
9 3e23_A Uncharacterized protein 99.8 1E-18 3.6E-23 151.3 16.4 165 75-297 11-179 (211)
10 3lcc_A Putative methyl chlorid 99.8 9.2E-19 3.1E-23 154.3 15.0 135 120-296 67-203 (235)
11 3dh0_A SAM dependent methyltra 99.8 2.1E-18 7.3E-23 149.8 16.4 138 119-296 37-177 (219)
12 3hnr_A Probable methyltransfer 99.8 1.8E-18 6.2E-23 150.4 14.8 147 99-297 33-198 (220)
13 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.8E-18 6.2E-23 156.7 15.3 138 119-296 70-241 (261)
14 1vl5_A Unknown conserved prote 99.8 2.7E-18 9.4E-23 153.5 15.8 139 119-296 37-186 (260)
15 3e8s_A Putative SAM dependent 99.8 6.2E-18 2.1E-22 146.6 16.5 168 75-296 11-205 (227)
16 3ujc_A Phosphoethanolamine N-m 99.8 7E-18 2.4E-22 150.1 17.0 150 103-297 43-203 (266)
17 3pfg_A N-methyltransferase; N, 99.8 3.4E-18 1.2E-22 153.1 15.0 107 102-259 39-149 (263)
18 1nkv_A Hypothetical protein YJ 99.8 4.3E-18 1.5E-22 151.3 15.1 154 100-296 21-183 (256)
19 3bkw_A MLL3908 protein, S-aden 99.8 6.7E-18 2.3E-22 148.5 15.9 145 106-296 34-210 (243)
20 3dli_A Methyltransferase; PSI- 99.8 1.3E-18 4.6E-23 153.9 11.4 145 103-297 28-181 (240)
21 2kw5_A SLR1183 protein; struct 99.8 8.8E-18 3E-22 144.3 16.0 133 122-296 32-167 (202)
22 3dtn_A Putative methyltransfer 99.8 1.1E-17 3.7E-22 146.9 16.4 151 101-296 29-210 (234)
23 2xvm_A Tellurite resistance pr 99.8 1.1E-17 3.9E-22 142.5 15.9 136 119-296 32-169 (199)
24 3bus_A REBM, methyltransferase 99.8 1.8E-17 6.2E-22 148.8 18.1 153 102-296 48-212 (273)
25 2o57_A Putative sarcosine dime 99.8 1.4E-17 4.9E-22 151.6 17.6 141 119-297 82-231 (297)
26 1ri5_A MRNA capping enzyme; me 99.8 9E-18 3.1E-22 152.0 16.0 141 119-297 64-247 (298)
27 3dlc_A Putative S-adenosyl-L-m 99.8 2.6E-18 8.9E-23 148.2 11.8 154 100-296 29-199 (219)
28 2p35_A Trans-aconitate 2-methy 99.8 4.4E-18 1.5E-22 151.3 13.5 144 103-295 21-185 (259)
29 1xxl_A YCGJ protein; structura 99.8 1.3E-17 4.6E-22 147.6 16.3 139 119-296 21-170 (239)
30 3ccf_A Cyclopropane-fatty-acyl 99.8 3.7E-18 1.3E-22 154.5 11.6 133 119-296 57-206 (279)
31 3sm3_A SAM-dependent methyltra 99.7 2.5E-17 8.5E-22 143.7 16.1 144 119-296 30-203 (235)
32 2i62_A Nicotinamide N-methyltr 99.7 7.8E-18 2.7E-22 150.0 13.1 168 119-296 56-235 (265)
33 3f4k_A Putative methyltransfer 99.7 2.6E-17 9E-22 146.3 16.5 151 103-296 33-192 (257)
34 2a14_A Indolethylamine N-methy 99.7 3.9E-18 1.3E-22 153.8 11.1 185 100-297 38-235 (263)
35 2ex4_A Adrenal gland protein A 99.7 2.6E-17 9E-22 145.6 15.9 138 119-297 79-222 (241)
36 3vc1_A Geranyl diphosphate 2-C 99.7 4.3E-17 1.5E-21 150.2 17.7 151 105-297 106-266 (312)
37 1y8c_A S-adenosylmethionine-de 99.7 3.6E-17 1.2E-21 143.7 16.4 100 119-259 37-140 (246)
38 3jwh_A HEN1; methyltransferase 99.7 3E-17 1E-21 142.9 15.6 144 119-296 29-188 (217)
39 1xtp_A LMAJ004091AAA; SGPP, st 99.7 1.5E-17 5.2E-22 147.4 13.6 138 119-297 93-235 (254)
40 3kkz_A Uncharacterized protein 99.7 3.7E-17 1.3E-21 146.8 16.3 151 103-296 33-192 (267)
41 2g72_A Phenylethanolamine N-me 99.7 1.2E-17 4E-22 152.1 12.3 176 102-296 56-252 (289)
42 1kpg_A CFA synthase;, cyclopro 99.7 1.3E-16 4.5E-21 144.5 19.1 150 103-297 52-225 (287)
43 3g2m_A PCZA361.24; SAM-depende 99.7 6.1E-17 2.1E-21 148.0 16.0 116 102-259 70-188 (299)
44 3jwg_A HEN1, methyltransferase 99.7 5.7E-17 1.9E-21 141.1 14.7 143 120-296 30-188 (219)
45 2yqz_A Hypothetical protein TT 99.7 5.3E-17 1.8E-21 144.4 14.9 155 99-296 22-192 (263)
46 3d2l_A SAM-dependent methyltra 99.7 9.5E-17 3.2E-21 141.1 16.3 113 99-259 19-135 (243)
47 3hem_A Cyclopropane-fatty-acyl 99.7 1.7E-16 5.9E-21 145.2 18.6 149 103-296 60-239 (302)
48 4hg2_A Methyltransferase type 99.7 7.4E-18 2.5E-22 152.5 9.1 105 103-259 29-133 (257)
49 3bxo_A N,N-dimethyltransferase 99.7 7.8E-17 2.7E-21 141.3 15.2 108 102-260 29-140 (239)
50 1ve3_A Hypothetical protein PH 99.7 1.8E-16 6.1E-21 138.0 17.4 130 87-262 12-143 (227)
51 3i9f_A Putative type 11 methyl 99.7 3.4E-17 1.1E-21 136.9 11.9 129 119-297 17-145 (170)
52 3mgg_A Methyltransferase; NYSG 99.7 9.3E-17 3.2E-21 144.5 15.6 140 119-297 37-195 (276)
53 3cc8_A Putative methyltransfer 99.7 6.5E-17 2.2E-21 140.4 13.9 144 103-297 21-182 (230)
54 1vlm_A SAM-dependent methyltra 99.7 1.9E-16 6.5E-21 138.2 15.8 141 99-296 34-184 (219)
55 2fk8_A Methoxy mycolic acid sy 99.7 2.9E-16 1E-20 144.5 17.7 149 103-296 78-250 (318)
56 2p8j_A S-adenosylmethionine-de 99.7 7.8E-17 2.7E-21 138.7 12.4 151 100-297 11-180 (209)
57 3ege_A Putative methyltransfer 99.7 1.1E-17 3.7E-22 150.3 7.2 144 102-296 21-174 (261)
58 3thr_A Glycine N-methyltransfe 99.7 2.9E-16 1E-20 142.4 16.7 105 120-259 58-173 (293)
59 3cgg_A SAM-dependent methyltra 99.7 2.9E-16 1E-20 132.6 15.3 124 119-297 46-172 (195)
60 3gu3_A Methyltransferase; alph 99.7 3.8E-16 1.3E-20 141.9 16.8 151 103-297 9-187 (284)
61 4e2x_A TCAB9; kijanose, tetron 99.7 5.3E-17 1.8E-21 155.3 11.3 153 100-297 92-250 (416)
62 3m70_A Tellurite resistance pr 99.7 2.6E-16 8.8E-21 142.7 15.3 134 120-296 121-256 (286)
63 4fsd_A Arsenic methyltransfera 99.7 1.7E-16 5.8E-21 150.8 14.4 146 119-295 83-246 (383)
64 2aot_A HMT, histamine N-methyl 99.7 2.4E-16 8.3E-21 143.8 14.6 185 71-296 9-217 (292)
65 2vdw_A Vaccinia virus capping 99.7 3.2E-16 1.1E-20 144.9 13.6 146 119-297 48-243 (302)
66 3ofk_A Nodulation protein S; N 99.7 5.6E-16 1.9E-20 134.3 13.1 102 119-262 51-155 (216)
67 2gs9_A Hypothetical protein TT 99.7 9.4E-16 3.2E-20 132.4 13.9 124 119-291 36-171 (211)
68 1wzn_A SAM-dependent methyltra 99.7 2.7E-15 9.3E-20 133.0 17.2 100 119-259 41-143 (252)
69 3ocj_A Putative exported prote 99.7 1.9E-15 6.5E-20 138.7 16.7 140 119-297 118-288 (305)
70 3ggd_A SAM-dependent methyltra 99.7 7.1E-16 2.4E-20 136.3 13.3 135 119-297 56-216 (245)
71 3g07_A 7SK snRNA methylphospha 99.7 3.4E-16 1.2E-20 143.4 11.3 169 119-296 46-265 (292)
72 1zx0_A Guanidinoacetate N-meth 99.7 3.4E-16 1.1E-20 138.3 10.8 148 101-293 47-203 (236)
73 3g5t_A Trans-aconitate 3-methy 99.6 1E-15 3.4E-20 139.9 13.3 148 102-292 24-196 (299)
74 2avn_A Ubiquinone/menaquinone 99.6 2.3E-15 7.9E-20 134.8 14.7 138 72-262 15-153 (260)
75 3e05_A Precorrin-6Y C5,15-meth 99.6 9.9E-15 3.4E-19 125.8 18.0 134 103-295 28-163 (204)
76 3orh_A Guanidinoacetate N-meth 99.6 2.7E-16 9.2E-21 139.8 8.1 149 101-294 47-204 (236)
77 3m33_A Uncharacterized protein 99.6 5.3E-16 1.8E-20 136.3 9.9 114 119-296 48-163 (226)
78 2pxx_A Uncharacterized protein 99.6 1.3E-15 4.6E-20 130.9 12.0 116 100-262 29-160 (215)
79 3grz_A L11 mtase, ribosomal pr 99.6 3.2E-15 1.1E-19 128.8 14.2 132 102-296 49-181 (205)
80 3bkx_A SAM-dependent methyltra 99.6 1E-14 3.4E-19 130.9 17.0 141 119-297 43-216 (275)
81 3njr_A Precorrin-6Y methylase; 99.6 1.4E-14 4.9E-19 125.9 16.9 122 119-296 55-176 (204)
82 3bgv_A MRNA CAP guanine-N7 met 99.6 8.2E-15 2.8E-19 134.8 15.2 147 119-297 34-229 (313)
83 1xdz_A Methyltransferase GIDB; 99.6 5.7E-15 2E-19 131.0 12.7 123 119-296 70-198 (240)
84 3mti_A RRNA methylase; SAM-dep 99.6 1.1E-14 3.6E-19 123.4 13.8 103 119-260 22-134 (185)
85 2r3s_A Uncharacterized protein 99.6 2E-14 6.8E-19 132.9 16.1 138 119-296 165-319 (335)
86 2zfu_A Nucleomethylin, cerebra 99.6 1.3E-14 4.4E-19 125.8 13.9 110 119-297 67-176 (215)
87 3hm2_A Precorrin-6Y C5,15-meth 99.6 2.9E-14 9.8E-19 119.3 14.8 122 119-296 25-149 (178)
88 3evz_A Methyltransferase; NYSG 99.6 5.9E-14 2E-18 122.8 16.9 126 119-296 55-202 (230)
89 3p2e_A 16S rRNA methylase; met 99.6 2.5E-15 8.5E-20 133.0 8.1 143 119-297 24-182 (225)
90 3mq2_A 16S rRNA methyltransfer 99.6 1.6E-14 5.6E-19 125.5 13.0 141 119-296 27-180 (218)
91 2nxc_A L11 mtase, ribosomal pr 99.6 3.2E-14 1.1E-18 127.8 15.0 131 103-296 110-240 (254)
92 3p9n_A Possible methyltransfer 99.6 4.7E-14 1.6E-18 120.2 13.6 114 103-260 33-152 (189)
93 1yzh_A TRNA (guanine-N(7)-)-me 99.6 6.3E-14 2.2E-18 121.8 14.7 126 119-296 41-178 (214)
94 3q87_B N6 adenine specific DNA 99.6 4E-14 1.4E-18 119.4 13.0 113 120-296 24-145 (170)
95 2yxd_A Probable cobalt-precorr 99.5 1.4E-13 4.8E-18 115.0 16.0 131 103-296 23-153 (183)
96 2fyt_A Protein arginine N-meth 99.5 3.3E-14 1.1E-18 133.3 13.4 101 119-258 64-168 (340)
97 1l3i_A Precorrin-6Y methyltran 99.5 9.7E-14 3.3E-18 116.7 15.0 123 119-295 33-155 (192)
98 1dus_A MJ0882; hypothetical pr 99.5 1E-13 3.5E-18 116.8 14.7 118 103-262 40-158 (194)
99 2fca_A TRNA (guanine-N(7)-)-me 99.5 7.6E-14 2.6E-18 121.9 14.4 125 119-295 38-174 (213)
100 3mcz_A O-methyltransferase; ad 99.5 1.3E-13 4.5E-18 128.6 16.6 138 120-296 180-335 (352)
101 3dp7_A SAM-dependent methyltra 99.5 6.8E-14 2.3E-18 131.9 14.8 139 119-296 179-338 (363)
102 1nt2_A Fibrillarin-like PRE-rR 99.5 1.2E-13 4.3E-18 120.7 15.3 127 119-297 57-192 (210)
103 1x19_A CRTF-related protein; m 99.5 1.2E-13 4.1E-18 129.6 16.1 149 102-296 177-344 (359)
104 3iv6_A Putative Zn-dependent a 99.5 3.4E-14 1.2E-18 128.8 11.9 112 103-259 33-146 (261)
105 3r0q_C Probable protein argini 99.5 6.1E-14 2.1E-18 133.2 13.9 115 101-259 49-167 (376)
106 2qe6_A Uncharacterized protein 99.5 7.2E-14 2.5E-18 127.2 13.8 131 120-296 78-238 (274)
107 1fbn_A MJ fibrillarin homologu 99.5 4E-14 1.4E-18 124.7 11.7 130 119-296 74-209 (230)
108 3q7e_A Protein arginine N-meth 99.5 4.8E-14 1.6E-18 132.5 12.5 100 120-258 67-170 (349)
109 3g89_A Ribosomal RNA small sub 99.5 1.2E-13 4.1E-18 124.0 14.5 162 78-296 36-208 (249)
110 3fpf_A Mtnas, putative unchara 99.5 2E-13 6.8E-18 125.8 15.7 98 118-259 121-220 (298)
111 1g6q_1 HnRNP arginine N-methyl 99.5 9.8E-14 3.4E-18 129.3 13.9 100 120-258 39-142 (328)
112 3htx_A HEN1; HEN1, small RNA m 99.5 3.7E-13 1.3E-17 137.9 19.0 144 119-296 721-894 (950)
113 2ift_A Putative methylase HI07 99.5 8.3E-14 2.8E-18 120.6 11.8 102 120-259 54-161 (201)
114 2pwy_A TRNA (adenine-N(1)-)-me 99.5 8.8E-14 3E-18 123.4 12.2 137 100-296 81-220 (258)
115 3lbf_A Protein-L-isoaspartate 99.5 2E-13 6.8E-18 117.8 14.0 108 103-259 65-172 (210)
116 1yb2_A Hypothetical protein TA 99.5 7.3E-14 2.5E-18 126.5 11.7 121 119-296 110-233 (275)
117 3uwp_A Histone-lysine N-methyl 99.5 6.7E-13 2.3E-17 127.2 18.7 186 28-262 86-289 (438)
118 2frn_A Hypothetical protein PH 99.5 2.3E-13 7.8E-18 123.9 14.8 128 119-296 125-253 (278)
119 3fzg_A 16S rRNA methylase; met 99.5 3.9E-14 1.3E-18 122.6 9.0 121 93-260 29-151 (200)
120 3gwz_A MMCR; methyltransferase 99.5 5.4E-13 1.9E-17 125.9 17.6 148 104-296 191-352 (369)
121 3i53_A O-methyltransferase; CO 99.5 2.6E-13 9E-18 125.8 15.0 137 119-296 169-317 (332)
122 3dmg_A Probable ribosomal RNA 99.5 2E-13 6.9E-18 130.1 14.4 118 102-261 218-340 (381)
123 3lpm_A Putative methyltransfer 99.5 3.9E-13 1.3E-17 120.5 15.3 126 119-296 49-197 (259)
124 1vbf_A 231AA long hypothetical 99.5 2.7E-13 9.1E-18 118.7 13.9 108 102-260 57-164 (231)
125 3eey_A Putative rRNA methylase 99.5 2.4E-13 8.3E-18 116.1 12.8 104 119-260 22-138 (197)
126 3bwc_A Spermidine synthase; SA 99.5 2.6E-13 8.9E-18 125.2 13.6 134 119-296 95-236 (304)
127 3mb5_A SAM-dependent methyltra 99.5 2.9E-13 9.9E-18 120.3 13.2 135 100-295 78-217 (255)
128 1jsx_A Glucose-inhibited divis 99.5 1.7E-13 5.7E-18 117.8 11.3 116 120-296 66-184 (207)
129 2ip2_A Probable phenazine-spec 99.5 7.6E-13 2.6E-17 122.6 16.4 146 104-296 157-318 (334)
130 1qzz_A RDMB, aclacinomycin-10- 99.5 8.1E-13 2.8E-17 124.1 16.7 137 119-296 182-335 (374)
131 3opn_A Putative hemolysin; str 99.5 1.7E-14 5.9E-19 128.4 4.6 133 119-296 37-180 (232)
132 1ws6_A Methyltransferase; stru 99.5 2.5E-13 8.5E-18 112.6 11.3 99 120-260 42-146 (171)
133 2ld4_A Anamorsin; methyltransf 99.5 1.1E-13 3.6E-18 116.6 9.1 116 118-295 11-130 (176)
134 3gdh_A Trimethylguanosine synt 99.5 1.8E-14 6.2E-19 127.1 4.4 134 120-293 79-212 (241)
135 1p91_A Ribosomal RNA large sub 99.5 1.6E-13 5.5E-18 122.9 10.7 105 102-262 73-179 (269)
136 3u81_A Catechol O-methyltransf 99.5 5.9E-13 2E-17 116.3 14.0 138 72-259 20-168 (221)
137 3dxy_A TRNA (guanine-N(7)-)-me 99.5 2E-13 6.7E-18 120.2 10.9 103 119-260 34-149 (218)
138 4df3_A Fibrillarin-like rRNA/T 99.5 1.2E-13 4.2E-18 123.2 9.2 157 84-296 51-213 (233)
139 2fhp_A Methylase, putative; al 99.4 4.2E-13 1.4E-17 113.0 11.1 104 119-261 44-154 (187)
140 3reo_A (ISO)eugenol O-methyltr 99.4 9.4E-13 3.2E-17 124.4 14.6 129 119-296 203-351 (368)
141 2b3t_A Protein methyltransfera 99.4 2.4E-12 8.3E-17 116.4 16.4 134 102-294 97-257 (276)
142 2fpo_A Methylase YHHF; structu 99.4 8.3E-13 2.8E-17 114.3 12.7 100 120-259 55-158 (202)
143 1g8a_A Fibrillarin-like PRE-rR 99.4 1.1E-12 3.7E-17 114.8 13.6 130 119-297 73-209 (227)
144 4dzr_A Protein-(glutamine-N5) 99.4 6.1E-14 2.1E-18 120.2 5.2 123 119-295 30-187 (215)
145 3lst_A CALO1 methyltransferase 99.4 9.5E-13 3.2E-17 123.1 13.7 143 106-296 175-332 (348)
146 1fp1_D Isoliquiritigenin 2'-O- 99.4 4.8E-13 1.6E-17 126.2 11.5 140 105-296 198-356 (372)
147 1tw3_A COMT, carminomycin 4-O- 99.4 1.8E-12 6E-17 121.3 15.3 137 119-296 183-335 (360)
148 3p9c_A Caffeic acid O-methyltr 99.4 1.9E-12 6.4E-17 122.3 15.4 140 105-296 190-349 (364)
149 3hp7_A Hemolysin, putative; st 99.4 2.9E-13 1E-17 124.5 9.5 134 119-296 85-228 (291)
150 2ipx_A RRNA 2'-O-methyltransfe 99.4 4.3E-13 1.5E-17 118.0 10.2 131 119-296 77-213 (233)
151 2esr_A Methyltransferase; stru 99.4 5E-13 1.7E-17 112.2 10.0 103 119-260 31-137 (177)
152 3ckk_A TRNA (guanine-N(7)-)-me 99.4 7.9E-13 2.7E-17 117.7 11.8 109 119-260 46-167 (235)
153 3bzb_A Uncharacterized protein 99.4 1.3E-12 4.3E-17 119.0 13.4 151 103-296 67-233 (281)
154 1i9g_A Hypothetical protein RV 99.4 9.7E-13 3.3E-17 118.5 12.4 119 99-262 83-204 (280)
155 3lec_A NADB-rossmann superfami 99.4 3.4E-12 1.2E-16 113.6 15.7 133 104-297 12-146 (230)
156 3kr9_A SAM-dependent methyltra 99.4 3.9E-12 1.3E-16 112.9 15.9 133 104-297 6-140 (225)
157 2yxe_A Protein-L-isoaspartate 99.4 1.6E-12 5.6E-17 112.4 13.2 108 103-259 65-175 (215)
158 1o54_A SAM-dependent O-methylt 99.4 2.4E-12 8.4E-17 116.3 14.8 133 103-296 100-235 (277)
159 3ntv_A MW1564 protein; rossman 99.4 8.3E-13 2.8E-17 116.6 11.2 101 120-261 72-176 (232)
160 3dr5_A Putative O-methyltransf 99.4 1.8E-12 6E-17 114.3 13.2 120 102-266 43-167 (221)
161 4hc4_A Protein arginine N-meth 99.4 1E-12 3.5E-17 125.0 11.9 119 93-258 64-186 (376)
162 3duw_A OMT, O-methyltransferas 99.4 2.7E-12 9.2E-17 111.8 13.7 103 120-263 59-169 (223)
163 1fp2_A Isoflavone O-methyltran 99.4 7.3E-13 2.5E-17 124.0 10.7 129 119-296 188-337 (352)
164 3tfw_A Putative O-methyltransf 99.4 3.7E-12 1.3E-16 113.7 14.3 102 120-262 64-171 (248)
165 2y1w_A Histone-arginine methyl 99.4 1.7E-12 5.9E-17 121.8 12.5 100 119-258 50-152 (348)
166 1dl5_A Protein-L-isoaspartate 99.4 2.1E-12 7.2E-17 119.4 12.9 108 103-259 63-173 (317)
167 2igt_A SAM dependent methyltra 99.4 2.4E-12 8.3E-17 120.4 13.0 128 120-295 154-299 (332)
168 4azs_A Methyltransferase WBDD; 99.4 8.6E-13 2.9E-17 131.7 10.4 97 120-255 67-167 (569)
169 3gnl_A Uncharacterized protein 99.4 6.3E-12 2.1E-16 112.8 14.9 133 104-297 12-146 (244)
170 3tr6_A O-methyltransferase; ce 99.4 2.8E-12 9.5E-17 111.7 12.3 112 103-262 55-175 (225)
171 1o9g_A RRNA methyltransferase; 99.4 1.3E-12 4.3E-17 116.3 10.0 134 119-260 51-213 (250)
172 2pjd_A Ribosomal RNA small sub 99.4 1.7E-12 5.8E-17 121.4 10.7 114 103-262 184-304 (343)
173 3c3p_A Methyltransferase; NP_9 99.4 4E-12 1.4E-16 110.0 12.0 98 120-259 57-158 (210)
174 3tma_A Methyltransferase; thum 99.4 7.4E-12 2.5E-16 117.4 14.5 134 103-296 191-335 (354)
175 3id6_C Fibrillarin-like rRNA/T 99.4 7.2E-12 2.5E-16 111.7 13.6 132 118-297 75-213 (232)
176 1u2z_A Histone-lysine N-methyl 99.4 4.6E-12 1.6E-16 122.5 13.1 127 101-262 228-360 (433)
177 4a6d_A Hydroxyindole O-methylt 99.3 2.8E-11 9.5E-16 113.7 17.3 136 119-296 179-330 (353)
178 1ej0_A FTSJ; methyltransferase 99.3 2.5E-12 8.5E-17 106.1 8.8 93 119-261 22-136 (180)
179 2yvl_A TRMI protein, hypotheti 99.3 1.3E-11 4.4E-16 108.7 13.7 113 103-262 79-191 (248)
180 4dcm_A Ribosomal RNA large sub 99.3 6.1E-12 2.1E-16 119.5 12.4 117 105-262 212-335 (375)
181 1af7_A Chemotaxis receptor met 99.3 2.5E-12 8.5E-17 117.4 9.3 127 120-258 106-249 (274)
182 2pbf_A Protein-L-isoaspartate 99.3 7.2E-12 2.5E-16 109.3 11.6 101 119-259 80-191 (227)
183 2gpy_A O-methyltransferase; st 99.3 7.6E-12 2.6E-16 109.9 11.6 100 120-260 55-159 (233)
184 1sui_A Caffeoyl-COA O-methyltr 99.3 6E-12 2.1E-16 112.6 11.0 109 103-259 70-188 (247)
185 3r3h_A O-methyltransferase, SA 99.3 1.8E-12 6E-17 115.7 7.5 99 120-259 61-168 (242)
186 3tm4_A TRNA (guanine N2-)-meth 99.3 2E-11 7E-16 115.6 15.2 123 119-297 217-349 (373)
187 1jg1_A PIMT;, protein-L-isoasp 99.3 1.1E-11 3.9E-16 109.1 12.5 96 119-259 91-187 (235)
188 2bm8_A Cephalosporin hydroxyla 99.3 3.1E-12 1.1E-16 113.7 8.8 118 120-295 82-214 (236)
189 1ixk_A Methyltransferase; open 99.3 2.7E-11 9.3E-16 112.2 14.8 129 119-296 118-271 (315)
190 3giw_A Protein of unknown func 99.3 1.9E-11 6.3E-16 111.5 12.8 131 121-295 80-242 (277)
191 2vdv_E TRNA (guanine-N(7)-)-me 99.3 1.4E-11 5E-16 109.4 11.8 110 119-260 49-172 (246)
192 2ozv_A Hypothetical protein AT 99.3 9.5E-12 3.3E-16 112.0 10.6 107 119-260 36-169 (260)
193 3c3y_A Pfomt, O-methyltransfer 99.3 2E-11 6.8E-16 108.3 12.4 109 103-259 61-179 (237)
194 1i1n_A Protein-L-isoaspartate 99.3 1.5E-11 5E-16 107.3 11.2 101 119-259 77-180 (226)
195 2avd_A Catechol-O-methyltransf 99.3 1.8E-11 6.3E-16 106.7 11.9 101 120-261 70-179 (229)
196 1r18_A Protein-L-isoaspartate( 99.3 1.3E-11 4.4E-16 108.1 10.8 101 119-259 84-192 (227)
197 2h00_A Methyltransferase 10 do 99.3 3.1E-12 1.1E-16 113.8 6.9 140 119-296 65-234 (254)
198 2hnk_A SAM-dependent O-methylt 99.3 1.4E-11 4.9E-16 108.7 11.1 100 120-260 61-180 (239)
199 3cbg_A O-methyltransferase; cy 99.3 2.5E-11 8.5E-16 107.2 12.6 100 120-260 73-181 (232)
200 1zg3_A Isoflavanone 4'-O-methy 99.3 1.2E-11 4E-16 116.0 10.6 128 120-296 194-343 (358)
201 3adn_A Spermidine synthase; am 99.3 2E-11 6.7E-16 112.4 11.9 106 120-259 84-196 (294)
202 3b3j_A Histone-arginine methyl 99.3 1.4E-11 4.8E-16 120.7 11.1 100 119-258 158-260 (480)
203 1wy7_A Hypothetical protein PH 99.3 9.1E-11 3.1E-15 100.7 14.7 120 119-296 49-171 (207)
204 1xj5_A Spermidine synthase 1; 99.2 4.6E-11 1.6E-15 111.8 12.7 107 119-260 120-234 (334)
205 1uir_A Polyamine aminopropyltr 99.2 3.3E-11 1.1E-15 111.6 11.4 106 120-259 78-193 (314)
206 2plw_A Ribosomal RNA methyltra 99.2 3.3E-11 1.1E-15 102.9 10.3 33 119-151 22-58 (201)
207 2b25_A Hypothetical protein; s 99.2 3.6E-11 1.2E-15 111.8 11.1 111 119-262 105-220 (336)
208 3sso_A Methyltransferase; macr 99.2 2.5E-11 8.6E-16 116.0 10.2 108 99-260 201-323 (419)
209 1nv8_A HEMK protein; class I a 99.2 5.1E-11 1.7E-15 108.9 11.4 100 120-259 124-247 (284)
210 3gjy_A Spermidine synthase; AP 99.2 2.9E-11 9.8E-16 112.4 9.5 100 120-258 90-197 (317)
211 1mjf_A Spermidine synthase; sp 99.2 2.4E-11 8.1E-16 110.8 8.7 111 120-259 76-191 (281)
212 2qm3_A Predicted methyltransfe 99.2 1.5E-10 5.1E-15 109.5 14.4 126 119-296 172-305 (373)
213 2i7c_A Spermidine synthase; tr 99.2 5.5E-11 1.9E-15 108.5 10.9 107 119-260 78-191 (283)
214 3ajd_A Putative methyltransfer 99.2 1.5E-10 5.3E-15 104.8 13.8 128 119-295 83-236 (274)
215 3a27_A TYW2, uncharacterized p 99.2 4.5E-11 1.5E-15 108.4 9.9 97 119-259 119-217 (272)
216 1zq9_A Probable dimethyladenos 99.2 1.2E-10 4.1E-15 106.4 12.7 111 103-257 16-143 (285)
217 2o07_A Spermidine synthase; st 99.2 1E-10 3.4E-15 108.0 11.7 106 119-259 95-207 (304)
218 2pt6_A Spermidine synthase; tr 99.2 5.3E-11 1.8E-15 110.7 9.7 105 120-259 117-228 (321)
219 1iy9_A Spermidine synthase; ro 99.2 7.3E-11 2.5E-15 107.3 10.3 105 120-259 76-187 (275)
220 1inl_A Spermidine synthase; be 99.2 1.1E-10 3.6E-15 107.4 11.2 105 120-259 91-203 (296)
221 3dou_A Ribosomal RNA large sub 99.2 8.7E-11 3E-15 101.1 9.9 91 119-259 25-137 (191)
222 1ne2_A Hypothetical protein TA 99.2 2E-10 7E-15 98.2 12.2 112 119-295 51-165 (200)
223 2wa2_A Non-structural protein 99.2 9.5E-12 3.2E-16 113.5 3.9 99 119-259 82-191 (276)
224 2cmg_A Spermidine synthase; tr 99.2 8E-11 2.7E-15 106.5 9.8 97 120-259 73-169 (262)
225 2b2c_A Spermidine synthase; be 99.2 9.5E-11 3.2E-15 108.8 10.4 105 120-259 109-220 (314)
226 2b78_A Hypothetical protein SM 99.2 1.5E-10 5.1E-15 110.2 11.6 103 120-259 213-329 (385)
227 3frh_A 16S rRNA methylase; met 99.2 2.3E-10 7.9E-15 102.3 12.1 120 93-261 86-206 (253)
228 2oxt_A Nucleoside-2'-O-methylt 99.2 1.7E-11 5.8E-16 111.2 4.8 99 119-259 74-183 (265)
229 3k6r_A Putative transferase PH 99.1 4.1E-10 1.4E-14 102.8 13.2 144 88-295 108-252 (278)
230 2ih2_A Modification methylase 99.1 2.3E-10 8E-15 108.8 12.0 129 102-292 26-186 (421)
231 2nyu_A Putative ribosomal RNA 99.1 9E-11 3.1E-15 99.6 8.1 91 119-259 22-143 (196)
232 4dmg_A Putative uncharacterize 99.1 4.9E-10 1.7E-14 107.1 12.6 99 120-258 215-323 (393)
233 2as0_A Hypothetical protein PH 99.1 4.1E-10 1.4E-14 107.2 11.7 103 119-259 217-333 (396)
234 2yxl_A PH0851 protein, 450AA l 99.1 1.6E-09 5.4E-14 105.1 15.5 128 119-295 259-414 (450)
235 1qam_A ERMC' methyltransferase 99.1 9.9E-10 3.4E-14 98.0 12.7 109 103-257 18-142 (244)
236 2h1r_A Dimethyladenosine trans 99.1 5.5E-10 1.9E-14 102.7 10.8 108 103-255 30-153 (299)
237 1wxx_A TT1595, hypothetical pr 99.1 4.2E-10 1.4E-14 106.8 10.1 101 120-259 210-323 (382)
238 2yx1_A Hypothetical protein MJ 99.1 6.2E-10 2.1E-14 103.9 10.7 116 120-295 196-312 (336)
239 3lcv_B Sisomicin-gentamicin re 99.1 6E-10 2.1E-14 100.7 10.0 153 92-296 111-268 (281)
240 3c0k_A UPF0064 protein YCCW; P 99.0 6.6E-10 2.2E-14 105.8 10.5 103 120-259 221-337 (396)
241 2f8l_A Hypothetical protein LM 99.0 1E-09 3.4E-14 102.5 11.1 125 119-293 130-279 (344)
242 1sqg_A SUN protein, FMU protei 99.0 3.1E-09 1.1E-13 102.3 14.1 127 119-295 246-399 (429)
243 3v97_A Ribosomal RNA large sub 99.0 2.2E-09 7.4E-14 109.7 12.4 103 120-259 540-655 (703)
244 2okc_A Type I restriction enzy 99.0 2.3E-09 7.9E-14 103.7 12.0 119 102-262 158-308 (445)
245 1yub_A Ermam, rRNA methyltrans 99.0 1.4E-10 4.6E-15 103.3 3.0 109 103-258 17-142 (245)
246 2p41_A Type II methyltransfera 99.0 6.1E-10 2.1E-14 102.9 7.1 97 119-259 82-189 (305)
247 3m4x_A NOL1/NOP2/SUN family pr 99.0 3.9E-09 1.3E-13 102.6 13.1 129 119-296 105-259 (456)
248 3m6w_A RRNA methylase; rRNA me 99.0 3.2E-09 1.1E-13 103.4 11.9 128 119-296 101-255 (464)
249 3gru_A Dimethyladenosine trans 98.9 3.5E-09 1.2E-13 97.4 11.0 85 103-232 38-122 (295)
250 2frx_A Hypothetical protein YE 98.9 7.8E-09 2.7E-13 101.1 13.8 101 119-258 117-243 (479)
251 2qfm_A Spermine synthase; sper 98.8 1E-08 3.6E-13 96.6 10.5 108 119-259 188-312 (364)
252 3ldu_A Putative methylase; str 98.8 1.5E-08 5.3E-13 96.3 11.9 113 102-257 182-340 (385)
253 2xyq_A Putative 2'-O-methyl tr 98.8 6.7E-09 2.3E-13 95.3 9.0 109 119-295 63-192 (290)
254 3k0b_A Predicted N6-adenine-sp 98.8 1.8E-08 6.2E-13 96.2 12.1 113 103-258 189-347 (393)
255 3fut_A Dimethyladenosine trans 98.8 8.9E-09 3.1E-13 93.6 9.5 96 103-246 35-133 (271)
256 3ldg_A Putative uncharacterize 98.8 3.1E-08 1.1E-12 94.3 13.4 113 103-258 182-340 (384)
257 2jjq_A Uncharacterized RNA met 98.8 4E-08 1.4E-12 94.7 14.2 96 119-259 290-385 (425)
258 1uwv_A 23S rRNA (uracil-5-)-me 98.8 4E-08 1.4E-12 94.7 13.6 97 119-258 286-386 (433)
259 3tqs_A Ribosomal RNA small sub 98.8 2.3E-08 7.8E-13 90.1 10.1 53 103-159 17-69 (255)
260 3b5i_A S-adenosyl-L-methionine 98.8 9.2E-08 3.1E-12 90.7 13.8 88 209-296 135-294 (374)
261 2ar0_A M.ecoki, type I restric 98.7 7.5E-08 2.6E-12 95.5 11.5 123 103-263 157-314 (541)
262 3bt7_A TRNA (uracil-5-)-methyl 98.7 6E-08 2.1E-12 91.5 9.9 107 102-258 201-323 (369)
263 2dul_A N(2),N(2)-dimethylguano 98.7 6.7E-08 2.3E-12 91.8 9.7 111 120-258 48-161 (378)
264 4gqb_A Protein arginine N-meth 98.6 9.7E-08 3.3E-12 96.1 10.3 115 103-258 341-464 (637)
265 2r6z_A UPF0341 protein in RSP 98.6 6E-08 2E-12 87.4 5.9 41 119-159 83-130 (258)
266 3ftd_A Dimethyladenosine trans 98.6 1.3E-07 4.5E-12 84.7 8.0 53 103-159 19-72 (249)
267 3uzu_A Ribosomal RNA small sub 98.5 2.1E-07 7E-12 84.9 9.1 53 103-159 30-86 (279)
268 3lkd_A Type I restriction-modi 98.5 5.8E-07 2E-11 89.2 12.5 108 119-263 221-360 (542)
269 3v97_A Ribosomal RNA large sub 98.5 6.9E-07 2.3E-11 91.2 13.2 115 103-259 178-345 (703)
270 2efj_A 3,7-dimethylxanthine me 98.5 3.3E-07 1.1E-11 87.1 10.0 87 211-297 136-289 (384)
271 1m6y_A S-adenosyl-methyltransf 98.5 2E-07 6.7E-12 85.9 8.3 73 119-231 26-105 (301)
272 2qy6_A UPF0209 protein YFCK; s 98.5 4.4E-07 1.5E-11 81.8 9.8 146 119-296 60-231 (257)
273 3khk_A Type I restriction-modi 98.5 6.7E-07 2.3E-11 88.8 11.8 128 120-292 245-419 (544)
274 3o4f_A Spermidine synthase; am 98.5 3.9E-07 1.3E-11 83.6 8.9 107 119-259 83-196 (294)
275 1qyr_A KSGA, high level kasuga 98.4 3.7E-07 1.3E-11 81.9 7.3 51 103-159 9-61 (252)
276 3ll7_A Putative methyltransfer 98.4 3.3E-07 1.1E-11 87.9 7.2 74 120-230 94-169 (410)
277 1m6e_X S-adenosyl-L-methionnin 98.4 3.3E-07 1.1E-11 86.4 6.7 143 119-296 51-276 (359)
278 3ua3_A Protein arginine N-meth 98.4 7.7E-07 2.6E-11 90.0 9.7 113 103-258 396-531 (745)
279 3axs_A Probable N(2),N(2)-dime 98.4 6.7E-07 2.3E-11 85.3 8.7 97 120-258 53-155 (392)
280 2b9e_A NOL1/NOP2/SUN domain fa 98.3 3.7E-06 1.3E-10 77.6 12.1 73 119-230 102-180 (309)
281 2oyr_A UPF0341 protein YHIQ; a 98.3 8.1E-07 2.8E-11 80.1 7.3 81 121-231 90-171 (258)
282 3s1s_A Restriction endonucleas 98.3 2.7E-06 9.2E-11 87.4 11.7 114 119-265 321-469 (878)
283 3c6k_A Spermine synthase; sper 98.2 6.4E-06 2.2E-10 78.0 9.8 110 119-259 205-329 (381)
284 3cvo_A Methyltransferase-like 98.1 3.4E-05 1.2E-09 67.0 12.6 96 120-258 31-151 (202)
285 1wg8_A Predicted S-adenosylmet 97.9 2.2E-05 7.4E-10 71.5 8.4 77 119-238 22-108 (285)
286 3evf_A RNA-directed RNA polyme 97.9 3.2E-05 1.1E-09 70.1 9.0 111 103-259 63-182 (277)
287 2zig_A TTHA0409, putative modi 97.9 2.2E-05 7.6E-10 71.6 7.8 55 103-162 224-278 (297)
288 2k4m_A TR8_protein, UPF0146 pr 97.9 2E-05 6.9E-10 65.0 6.1 46 102-153 24-71 (153)
289 4auk_A Ribosomal RNA large sub 97.8 7.4E-05 2.5E-09 70.5 10.3 119 119-293 211-333 (375)
290 3ufb_A Type I restriction-modi 97.8 0.00021 7E-09 70.6 13.3 42 118-159 216-272 (530)
291 2wk1_A NOVP; transferase, O-me 97.7 0.00042 1.4E-08 63.1 13.1 133 79-259 69-242 (282)
292 3gcz_A Polyprotein; flavivirus 97.2 0.00078 2.7E-08 61.1 8.2 46 103-153 79-126 (282)
293 2px2_A Genome polyprotein [con 97.1 0.0012 4E-08 59.2 8.1 96 118-258 72-180 (269)
294 1g60_A Adenine-specific methyl 97.1 0.0013 4.5E-08 58.5 7.9 54 103-161 201-254 (260)
295 4fzv_A Putative methyltransfer 97.1 0.0036 1.2E-07 58.7 11.1 107 119-258 148-281 (359)
296 1g55_A DNA cytosine methyltran 96.8 0.0098 3.4E-07 55.2 11.7 40 120-159 2-44 (343)
297 3eld_A Methyltransferase; flav 96.8 0.0077 2.6E-07 54.9 10.5 35 119-153 81-117 (300)
298 2c7p_A Modification methylase 96.7 0.023 7.8E-07 52.5 13.5 41 119-159 10-51 (327)
299 3vyw_A MNMC2; tRNA wobble urid 96.6 0.011 3.7E-07 54.3 10.2 71 207-296 167-244 (308)
300 3r24_A NSP16, 2'-O-methyl tran 96.5 0.0066 2.3E-07 55.5 7.6 49 210-259 156-215 (344)
301 3g7u_A Cytosine-specific methy 96.3 0.032 1.1E-06 52.5 11.8 39 121-159 3-42 (376)
302 1pqw_A Polyketide synthase; ro 96.2 0.0067 2.3E-07 51.0 6.1 39 119-157 38-79 (198)
303 4ej6_A Putative zinc-binding d 96.2 0.0077 2.6E-07 56.1 6.7 41 119-159 182-225 (370)
304 3s2e_A Zinc-containing alcohol 96.2 0.0071 2.4E-07 55.5 6.3 42 118-159 165-208 (340)
305 1rjd_A PPM1P, carboxy methyl t 96.1 0.048 1.6E-06 50.5 11.8 154 120-293 98-281 (334)
306 1f8f_A Benzyl alcohol dehydrog 96.1 0.01 3.6E-07 55.1 7.0 42 118-159 189-233 (371)
307 3p8z_A Mtase, non-structural p 96.1 0.027 9.4E-07 49.9 9.1 96 119-258 78-183 (267)
308 3two_A Mannitol dehydrogenase; 95.9 0.023 7.8E-07 52.2 8.4 42 118-159 175-218 (348)
309 2dph_A Formaldehyde dismutase; 95.9 0.021 7.2E-07 53.6 8.2 41 118-158 184-227 (398)
310 3fpc_A NADP-dependent alcohol 95.8 0.016 5.4E-07 53.4 6.8 42 118-159 165-209 (352)
311 3qv2_A 5-cytosine DNA methyltr 95.7 0.12 4.1E-06 47.7 12.4 42 118-159 8-53 (327)
312 3lkz_A Non-structural protein 95.7 0.064 2.2E-06 48.9 10.1 98 119-259 94-202 (321)
313 1uuf_A YAHK, zinc-type alcohol 95.6 0.018 6E-07 53.7 6.7 41 119-159 194-236 (369)
314 1i4w_A Mitochondrial replicati 95.6 0.021 7.3E-07 53.3 7.2 40 120-159 59-100 (353)
315 4b7c_A Probable oxidoreductase 95.6 0.019 6.4E-07 52.4 6.7 40 118-157 148-190 (336)
316 1v3u_A Leukotriene B4 12- hydr 95.6 0.023 7.8E-07 51.8 7.2 41 118-158 144-187 (333)
317 3tka_A Ribosomal RNA small sub 95.6 0.039 1.3E-06 51.3 8.5 50 104-157 46-98 (347)
318 1e3j_A NADP(H)-dependent ketos 95.6 0.03 1E-06 51.5 7.9 41 119-159 168-210 (352)
319 3goh_A Alcohol dehydrogenase, 95.6 0.025 8.5E-07 51.2 7.1 41 118-159 141-183 (315)
320 1pl8_A Human sorbitol dehydrog 95.5 0.018 6.1E-07 53.2 6.1 41 119-159 171-214 (356)
321 3ip1_A Alcohol dehydrogenase, 95.5 0.089 3E-06 49.4 10.9 42 118-159 212-256 (404)
322 3pvc_A TRNA 5-methylaminomethy 95.4 0.03 1E-06 56.5 7.9 70 206-296 148-229 (689)
323 3m6i_A L-arabinitol 4-dehydrog 95.4 0.04 1.4E-06 50.8 8.1 41 119-159 179-222 (363)
324 2zig_A TTHA0409, putative modi 95.4 0.021 7.1E-07 51.7 6.0 90 206-296 20-132 (297)
325 3ubt_Y Modification methylase 95.3 0.19 6.3E-06 45.6 12.2 39 121-159 1-40 (331)
326 3nx4_A Putative oxidoreductase 95.3 0.058 2E-06 48.8 8.7 38 122-159 149-189 (324)
327 1iz0_A Quinone oxidoreductase; 95.3 0.01 3.4E-07 53.5 3.5 40 119-158 125-167 (302)
328 3gms_A Putative NADPH:quinone 95.3 0.021 7.4E-07 52.2 5.8 42 118-159 143-187 (340)
329 2j3h_A NADP-dependent oxidored 95.3 0.033 1.1E-06 50.9 7.0 41 118-158 154-197 (345)
330 1rjw_A ADH-HT, alcohol dehydro 95.2 0.025 8.4E-07 51.9 5.9 40 119-158 164-205 (339)
331 3qwb_A Probable quinone oxidor 95.2 0.028 9.5E-07 51.3 6.1 42 118-159 147-191 (334)
332 4h0n_A DNMT2; SAH binding, tra 95.1 0.22 7.4E-06 46.0 12.0 40 120-159 3-45 (333)
333 1kol_A Formaldehyde dehydrogen 95.1 0.039 1.3E-06 51.6 7.1 42 118-159 184-228 (398)
334 2h6e_A ADH-4, D-arabinose 1-de 95.1 0.024 8.3E-07 52.0 5.5 40 120-159 171-214 (344)
335 3uog_A Alcohol dehydrogenase; 95.1 0.12 4.2E-06 47.7 10.3 42 118-159 188-231 (363)
336 2c0c_A Zinc binding alcohol de 95.0 0.051 1.7E-06 50.3 7.4 41 119-159 163-206 (362)
337 3uko_A Alcohol dehydrogenase c 94.9 0.032 1.1E-06 51.9 5.9 42 118-159 192-236 (378)
338 3jyn_A Quinone oxidoreductase; 94.9 0.033 1.1E-06 50.6 5.8 42 118-159 139-183 (325)
339 3me5_A Cytosine-specific methy 94.9 0.59 2E-05 45.4 14.9 56 104-159 70-128 (482)
340 4eye_A Probable oxidoreductase 94.8 0.033 1.1E-06 51.1 5.6 42 118-159 158-202 (342)
341 2eih_A Alcohol dehydrogenase; 94.8 0.034 1.2E-06 51.0 5.6 42 118-159 165-209 (343)
342 2vz8_A Fatty acid synthase; tr 94.8 0.0065 2.2E-07 69.8 0.8 74 222-295 1309-1390(2512)
343 2hcy_A Alcohol dehydrogenase 1 94.8 0.036 1.2E-06 50.9 5.7 40 119-158 169-211 (347)
344 1p0f_A NADP-dependent alcohol 94.6 0.071 2.4E-06 49.4 7.5 42 118-159 190-234 (373)
345 1boo_A Protein (N-4 cytosine-s 94.6 0.056 1.9E-06 49.6 6.4 44 119-162 252-295 (323)
346 1cdo_A Alcohol dehydrogenase; 94.5 0.069 2.4E-06 49.5 7.1 42 118-159 191-235 (374)
347 1piw_A Hypothetical zinc-type 94.5 0.029 9.9E-07 51.8 4.5 41 119-159 179-221 (360)
348 1wly_A CAAR, 2-haloacrylate re 94.5 0.056 1.9E-06 49.2 6.4 40 119-158 145-187 (333)
349 1yb5_A Quinone oxidoreductase; 94.5 0.077 2.6E-06 48.9 7.3 40 119-158 170-212 (351)
350 2d8a_A PH0655, probable L-thre 94.5 0.067 2.3E-06 49.1 6.8 41 119-159 167-210 (348)
351 2fzw_A Alcohol dehydrogenase c 94.4 0.089 3E-06 48.6 7.5 42 118-159 189-233 (373)
352 1jvb_A NAD(H)-dependent alcoho 94.3 0.066 2.3E-06 49.1 6.4 41 119-159 170-214 (347)
353 4e21_A 6-phosphogluconate dehy 94.3 0.27 9.2E-06 45.8 10.6 114 120-295 22-137 (358)
354 3fwz_A Inner membrane protein 94.2 0.49 1.7E-05 37.3 10.7 38 120-157 7-46 (140)
355 4dup_A Quinone oxidoreductase; 94.2 0.062 2.1E-06 49.5 6.0 42 118-159 166-210 (353)
356 2jhf_A Alcohol dehydrogenase E 94.2 0.1 3.4E-06 48.4 7.5 42 118-159 190-234 (374)
357 1qor_A Quinone oxidoreductase; 94.2 0.051 1.7E-06 49.3 5.2 41 119-159 140-183 (327)
358 4a0s_A Octenoyl-COA reductase/ 94.1 0.14 4.7E-06 48.7 8.3 42 118-159 219-263 (447)
359 1e3i_A Alcohol dehydrogenase, 94.1 0.095 3.2E-06 48.6 7.0 42 118-159 194-238 (376)
360 2zb4_A Prostaglandin reductase 94.0 0.1 3.6E-06 47.9 7.1 37 121-157 162-202 (357)
361 2cf5_A Atccad5, CAD, cinnamyl 94.0 0.1 3.6E-06 48.0 7.0 39 119-157 180-220 (357)
362 1yqd_A Sinapyl alcohol dehydro 94.0 0.14 4.9E-06 47.3 8.0 39 119-157 187-227 (366)
363 3krt_A Crotonyl COA reductase; 93.9 0.094 3.2E-06 50.1 6.8 42 118-159 227-271 (456)
364 2vhw_A Alanine dehydrogenase; 93.9 0.052 1.8E-06 50.9 4.9 38 119-158 167-208 (377)
365 1vj0_A Alcohol dehydrogenase, 93.8 0.081 2.8E-06 49.2 6.0 41 119-159 195-238 (380)
366 3jv7_A ADH-A; dehydrogenase, n 93.8 0.11 3.7E-06 47.5 6.7 42 118-159 170-214 (345)
367 2eez_A Alanine dehydrogenase; 93.7 0.076 2.6E-06 49.5 5.6 37 119-157 165-205 (369)
368 2b5w_A Glucose dehydrogenase; 93.6 0.17 5.7E-06 46.6 7.8 39 121-159 174-220 (357)
369 2vn8_A Reticulon-4-interacting 93.4 0.071 2.4E-06 49.5 4.8 39 118-157 182-223 (375)
370 2cdc_A Glucose dehydrogenase g 93.3 0.23 8E-06 45.7 8.2 39 120-158 181-224 (366)
371 2j8z_A Quinone oxidoreductase; 93.3 0.13 4.6E-06 47.2 6.5 41 118-158 161-204 (354)
372 2dq4_A L-threonine 3-dehydroge 93.2 0.058 2E-06 49.4 3.8 37 119-155 164-203 (343)
373 3ps9_A TRNA 5-methylaminomethy 93.2 0.43 1.5E-05 47.8 10.5 146 119-296 66-237 (676)
374 1xa0_A Putative NADPH dependen 93.0 0.089 3E-06 47.7 4.7 37 122-158 152-191 (328)
375 3oig_A Enoyl-[acyl-carrier-pro 93.0 0.69 2.4E-05 40.1 10.4 41 119-159 6-51 (266)
376 1boo_A Protein (N-4 cytosine-s 93.0 0.24 8.2E-06 45.3 7.6 86 206-296 13-116 (323)
377 3e8x_A Putative NAD-dependent 93.0 0.44 1.5E-05 40.5 8.9 36 119-154 20-58 (236)
378 3gaz_A Alcohol dehydrogenase s 92.9 0.18 6.1E-06 46.1 6.7 41 118-159 149-192 (343)
379 1tt7_A YHFP; alcohol dehydroge 92.9 0.21 7.2E-06 45.2 7.1 38 122-159 153-193 (330)
380 3gqv_A Enoyl reductase; medium 92.9 0.19 6.6E-06 46.5 6.9 40 118-158 163-205 (371)
381 2oo3_A Protein involved in cat 92.8 0.39 1.3E-05 43.4 8.7 134 76-264 58-201 (283)
382 1eg2_A Modification methylase 92.7 0.15 5.3E-06 46.7 5.9 54 103-161 231-287 (319)
383 3g0o_A 3-hydroxyisobutyrate de 92.7 0.98 3.4E-05 40.4 11.3 37 120-156 7-45 (303)
384 3ggo_A Prephenate dehydrogenas 92.6 0.85 2.9E-05 41.4 10.9 39 120-158 33-75 (314)
385 3p2y_A Alanine dehydrogenase/p 92.6 0.078 2.7E-06 50.0 3.8 40 119-158 183-224 (381)
386 3c85_A Putative glutathione-re 92.5 0.93 3.2E-05 37.1 10.0 38 119-156 38-78 (183)
387 3k31_A Enoyl-(acyl-carrier-pro 92.2 0.65 2.2E-05 41.4 9.3 40 119-158 29-73 (296)
388 3h2s_A Putative NADH-flavin re 92.1 0.65 2.2E-05 38.8 8.8 32 122-153 2-36 (224)
389 1x13_A NAD(P) transhydrogenase 92.1 0.079 2.7E-06 50.2 3.2 39 119-157 171-211 (401)
390 2f1k_A Prephenate dehydrogenas 92.1 1.1 3.9E-05 39.1 10.7 35 122-156 2-38 (279)
391 4dvj_A Putative zinc-dependent 91.9 0.4 1.4E-05 44.2 7.8 41 119-159 171-215 (363)
392 3llv_A Exopolyphosphatase-rela 91.8 0.52 1.8E-05 36.8 7.4 38 120-157 6-45 (141)
393 4dio_A NAD(P) transhydrogenase 91.8 0.09 3.1E-06 50.0 3.2 40 119-158 189-230 (405)
394 3grk_A Enoyl-(acyl-carrier-pro 91.6 2.5 8.6E-05 37.5 12.5 40 119-158 30-74 (293)
395 4dll_A 2-hydroxy-3-oxopropiona 91.5 1.6 5.6E-05 39.4 11.3 36 120-155 31-68 (320)
396 3tqh_A Quinone oxidoreductase; 91.2 0.41 1.4E-05 43.1 7.0 40 118-158 151-193 (321)
397 1pjc_A Protein (L-alanine dehy 91.2 0.23 7.8E-06 46.1 5.3 39 120-158 167-207 (361)
398 1l7d_A Nicotinamide nucleotide 91.2 0.12 4.1E-06 48.4 3.4 39 119-157 171-211 (384)
399 3fbg_A Putative arginate lyase 91.2 0.42 1.4E-05 43.6 7.0 41 119-159 150-193 (346)
400 4a2c_A Galactitol-1-phosphate 91.1 0.42 1.4E-05 43.3 7.0 42 118-159 159-203 (346)
401 3ce6_A Adenosylhomocysteinase; 91.1 1 3.4E-05 43.9 9.9 37 119-157 273-313 (494)
402 3qha_A Putative oxidoreductase 91.1 0.98 3.3E-05 40.3 9.3 36 120-155 15-52 (296)
403 4eez_A Alcohol dehydrogenase 1 90.9 0.82 2.8E-05 41.4 8.7 41 119-159 163-206 (348)
404 3o38_A Short chain dehydrogena 90.6 4 0.00014 35.1 12.7 39 119-157 21-63 (266)
405 4ezb_A Uncharacterized conserv 90.6 2.7 9.2E-05 38.0 11.8 31 121-151 25-58 (317)
406 2h78_A Hibadh, 3-hydroxyisobut 90.4 2.1 7.1E-05 38.0 10.8 36 121-156 4-41 (302)
407 3l9w_A Glutathione-regulated p 90.4 1.2 4.2E-05 42.0 9.7 37 120-158 4-44 (413)
408 2ew2_A 2-dehydropantoate 2-red 90.3 2.1 7.1E-05 37.7 10.7 36 121-156 4-41 (316)
409 2cvz_A Dehydrogenase, 3-hydrox 90.1 2.4 8.3E-05 37.0 10.9 34 122-156 3-38 (289)
410 1vpd_A Tartronate semialdehyde 90.1 2.1 7.2E-05 37.7 10.5 36 121-156 6-43 (299)
411 3tjr_A Short chain dehydrogena 89.8 5.3 0.00018 35.4 13.0 39 119-157 30-71 (301)
412 3qiv_A Short-chain dehydrogena 89.8 6.6 0.00023 33.4 13.2 39 119-157 8-49 (253)
413 2g5c_A Prephenate dehydrogenas 89.7 2.8 9.6E-05 36.6 11.0 36 122-157 3-42 (281)
414 2qrv_A DNA (cytosine-5)-methyl 89.5 0.91 3.1E-05 41.1 7.6 42 118-159 14-58 (295)
415 3ius_A Uncharacterized conserv 89.5 3.2 0.00011 35.9 11.0 31 120-152 5-39 (286)
416 3pxx_A Carveol dehydrogenase; 89.3 3.8 0.00013 35.6 11.4 32 119-150 9-43 (287)
417 4fs3_A Enoyl-[acyl-carrier-pro 89.2 2.8 9.5E-05 36.4 10.4 42 119-160 5-51 (256)
418 3f9i_A 3-oxoacyl-[acyl-carrier 88.9 4.1 0.00014 34.7 11.2 40 118-157 12-54 (249)
419 3lyl_A 3-oxoacyl-(acyl-carrier 88.9 8.8 0.0003 32.4 13.3 39 119-157 4-45 (247)
420 1id1_A Putative potassium chan 88.6 3.7 0.00012 32.4 10.0 29 120-150 3-35 (153)
421 3tos_A CALS11; methyltransfera 88.6 5.3 0.00018 35.3 11.8 164 72-258 17-214 (257)
422 4e6p_A Probable sorbitol dehyd 88.5 7.7 0.00026 33.3 12.8 37 119-155 7-46 (259)
423 3pef_A 6-phosphogluconate dehy 88.4 2.1 7E-05 37.8 9.1 35 121-155 2-38 (287)
424 1zcj_A Peroxisomal bifunctiona 88.2 2.9 0.0001 39.9 10.7 40 120-159 37-78 (463)
425 3d4o_A Dipicolinate synthase s 88.2 2.8 9.7E-05 37.3 9.9 34 118-153 153-190 (293)
426 3ek2_A Enoyl-(acyl-carrier-pro 88.1 6.7 0.00023 33.5 12.1 39 118-156 12-55 (271)
427 3gvc_A Oxidoreductase, probabl 88.0 8.1 0.00028 33.8 12.8 37 119-155 28-67 (277)
428 2zyd_A 6-phosphogluconate dehy 87.9 3.5 0.00012 39.6 11.0 37 120-156 15-53 (480)
429 2rir_A Dipicolinate synthase, 87.6 3 0.0001 37.2 9.7 34 118-153 155-192 (300)
430 3i4f_A 3-oxoacyl-[acyl-carrier 87.5 6.2 0.00021 33.8 11.5 32 120-151 7-41 (264)
431 3pk0_A Short-chain dehydrogena 87.4 11 0.00037 32.5 13.1 39 119-157 9-50 (262)
432 2gdz_A NAD+-dependent 15-hydro 87.3 5.2 0.00018 34.4 11.0 36 120-155 7-45 (267)
433 4gwg_A 6-phosphogluconate dehy 87.3 4.2 0.00014 39.3 11.1 120 120-295 4-125 (484)
434 3dqp_A Oxidoreductase YLBE; al 87.2 3.1 0.00011 34.6 9.1 29 122-151 2-34 (219)
435 3c24_A Putative oxidoreductase 87.1 3.4 0.00012 36.3 9.7 36 121-156 12-50 (286)
436 3gvp_A Adenosylhomocysteinase 87.0 1.2 4.2E-05 42.5 7.0 35 119-153 219-255 (435)
437 3n74_A 3-ketoacyl-(acyl-carrie 87.0 11 0.00038 32.1 12.8 38 119-156 8-48 (261)
438 3rkr_A Short chain oxidoreduct 86.9 10 0.00035 32.5 12.6 39 119-157 28-69 (262)
439 3o26_A Salutaridine reductase; 86.9 3.9 0.00013 35.7 10.0 39 119-157 11-52 (311)
440 3n58_A Adenosylhomocysteinase; 86.9 1.6 5.5E-05 42.0 7.8 48 103-153 233-282 (464)
441 1gu7_A Enoyl-[acyl-carrier-pro 86.8 0.85 2.9E-05 41.7 5.7 33 119-151 166-202 (364)
442 3ucx_A Short chain dehydrogena 86.8 14 0.00049 31.7 13.9 39 119-157 10-51 (264)
443 3op4_A 3-oxoacyl-[acyl-carrier 86.7 10 0.00034 32.4 12.4 38 119-156 8-48 (248)
444 1bg6_A N-(1-D-carboxylethyl)-L 86.4 2.8 9.5E-05 37.8 8.9 36 121-156 5-42 (359)
445 3doj_A AT3G25530, dehydrogenas 86.4 2.9 9.9E-05 37.5 9.0 36 120-155 21-58 (310)
446 1g60_A Adenine-specific methyl 86.2 1.4 4.7E-05 38.6 6.5 73 209-296 6-95 (260)
447 3uve_A Carveol dehydrogenase ( 86.2 13 0.00046 32.2 13.1 32 119-150 10-44 (286)
448 1y1p_A ARII, aldehyde reductas 86.1 8.5 0.00029 33.8 11.9 35 119-154 10-48 (342)
449 2py6_A Methyltransferase FKBM; 86.1 1.1 3.7E-05 42.3 6.1 42 118-159 225-270 (409)
450 3rwb_A TPLDH, pyridoxal 4-dehy 86.1 9.1 0.00031 32.7 11.7 38 119-156 5-45 (247)
451 2p4q_A 6-phosphogluconate dehy 86.0 4.3 0.00015 39.3 10.4 37 120-156 10-48 (497)
452 2iz1_A 6-phosphogluconate dehy 86.0 3.8 0.00013 39.2 10.0 36 121-156 6-43 (474)
453 2ae2_A Protein (tropinone redu 85.9 14 0.00047 31.6 12.9 37 119-155 8-47 (260)
454 4gbj_A 6-phosphogluconate dehy 85.8 3.2 0.00011 37.2 8.9 112 121-296 6-120 (297)
455 1ae1_A Tropinone reductase-I; 85.6 17 0.00058 31.4 13.6 37 119-155 20-59 (273)
456 3obb_A Probable 3-hydroxyisobu 85.6 5 0.00017 36.0 10.1 34 122-155 5-40 (300)
457 3swr_A DNA (cytosine-5)-methyl 85.6 4.7 0.00016 42.5 11.1 42 118-159 538-581 (1002)
458 3r1i_A Short-chain type dehydr 85.5 9.2 0.00031 33.4 11.7 38 119-156 31-71 (276)
459 3ew7_A LMO0794 protein; Q8Y8U8 85.5 3.3 0.00011 34.1 8.3 31 122-152 2-35 (221)
460 1zsy_A Mitochondrial 2-enoyl t 85.3 3.1 0.00011 37.8 8.8 29 119-147 167-198 (357)
461 4egf_A L-xylulose reductase; s 85.2 17 0.00058 31.3 13.2 39 119-157 19-60 (266)
462 3sju_A Keto reductase; short-c 85.2 16 0.00056 31.7 13.2 38 120-157 24-64 (279)
463 3pgx_A Carveol dehydrogenase; 85.2 16 0.00056 31.5 13.1 31 119-149 14-47 (280)
464 3cky_A 2-hydroxymethyl glutara 85.1 6.4 0.00022 34.5 10.5 36 120-155 4-41 (301)
465 2uyo_A Hypothetical protein ML 85.1 9.4 0.00032 34.5 11.8 137 121-295 104-274 (310)
466 2bgk_A Rhizome secoisolaricire 85.1 12 0.00041 32.0 12.2 36 119-154 15-53 (278)
467 3l77_A Short-chain alcohol deh 84.8 12 0.0004 31.4 11.7 37 120-156 2-41 (235)
468 4ibo_A Gluconate dehydrogenase 84.8 11 0.00036 32.9 11.7 38 119-156 25-65 (271)
469 3imf_A Short chain dehydrogena 84.8 15 0.00053 31.3 12.7 39 119-157 5-46 (257)
470 3pdu_A 3-hydroxyisobutyrate de 84.7 2.7 9.2E-05 37.0 7.8 35 122-156 3-39 (287)
471 1pgj_A 6PGDH, 6-PGDH, 6-phosph 84.7 6.2 0.00021 37.8 10.9 36 121-156 2-39 (478)
472 2pd4_A Enoyl-[acyl-carrier-pro 84.7 4.5 0.00015 35.2 9.2 33 120-152 6-43 (275)
473 3h7a_A Short chain dehydrogena 84.6 8.9 0.00031 32.9 11.0 39 119-157 6-47 (252)
474 3l6d_A Putative oxidoreductase 84.6 5.7 0.0002 35.4 10.0 38 119-156 8-47 (306)
475 3v2h_A D-beta-hydroxybutyrate 84.5 18 0.0006 31.5 13.1 36 120-155 25-64 (281)
476 2duw_A Putative COA-binding pr 84.5 4.8 0.00017 32.0 8.5 52 224-295 70-121 (145)
477 3k96_A Glycerol-3-phosphate de 84.4 6.1 0.00021 36.4 10.3 38 120-157 29-68 (356)
478 3uf0_A Short-chain dehydrogena 84.4 13 0.00045 32.2 12.2 34 119-152 30-66 (273)
479 1eg2_A Modification methylase 84.3 1.8 6E-05 39.5 6.5 84 207-296 38-136 (319)
480 3gg2_A Sugar dehydrogenase, UD 84.0 9.3 0.00032 36.3 11.7 37 121-157 3-41 (450)
481 2jah_A Clavulanic acid dehydro 84.0 19 0.00064 30.6 13.4 36 120-155 7-45 (247)
482 3hwr_A 2-dehydropantoate 2-red 84.0 6.3 0.00022 35.4 10.1 39 119-158 18-58 (318)
483 3oec_A Carveol dehydrogenase ( 83.9 18 0.00062 32.1 13.1 32 119-150 45-79 (317)
484 3tox_A Short chain dehydrogena 83.8 14 0.00048 32.3 12.1 38 119-156 7-47 (280)
485 4dqx_A Probable oxidoreductase 83.8 21 0.00072 31.0 13.4 37 119-155 26-65 (277)
486 1ja9_A 4HNR, 1,3,6,8-tetrahydr 83.7 4.7 0.00016 34.5 8.8 36 119-154 20-59 (274)
487 3d1l_A Putative NADP oxidoredu 83.7 6.2 0.00021 34.1 9.6 37 120-156 10-49 (266)
488 3l4b_C TRKA K+ channel protien 83.6 8.3 0.00028 32.2 10.2 33 122-156 2-38 (218)
489 3svt_A Short-chain type dehydr 83.5 21 0.00072 30.8 13.1 39 119-157 10-51 (281)
490 1nff_A Putative oxidoreductase 83.5 19 0.00066 30.8 12.7 35 120-154 7-44 (260)
491 4ft4_B DNA (cytosine-5)-methyl 83.4 7.4 0.00025 39.5 11.4 41 119-159 211-258 (784)
492 3k6j_A Protein F01G10.3, confi 83.4 12 0.00041 35.9 12.2 33 120-152 54-88 (460)
493 1fmc_A 7 alpha-hydroxysteroid 83.4 5.9 0.0002 33.5 9.2 36 119-155 10-49 (255)
494 1qsg_A Enoyl-[acyl-carrier-pro 83.4 6.4 0.00022 33.9 9.5 32 120-151 9-45 (265)
495 3tfo_A Putative 3-oxoacyl-(acy 83.3 19 0.00064 31.2 12.7 38 120-157 4-44 (264)
496 3l6e_A Oxidoreductase, short-c 83.2 20 0.00068 30.2 13.0 37 120-156 3-42 (235)
497 1wma_A Carbonyl reductase [NAD 83.2 5.8 0.0002 33.7 9.1 35 120-155 4-43 (276)
498 4fn4_A Short chain dehydrogena 83.1 23 0.00078 30.9 13.3 40 119-158 6-48 (254)
499 4da9_A Short-chain dehydrogena 82.9 19 0.00066 31.2 12.7 37 119-155 28-68 (280)
500 3ioy_A Short-chain dehydrogena 82.9 17 0.00058 32.4 12.5 39 119-157 7-48 (319)
No 1
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.84 E-value=1.7e-20 Score=163.19 Aligned_cols=148 Identities=12% Similarity=0.117 Sum_probs=103.3
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|+++..||++|++|+|+|+|+.|+..|+..... . .. ... ..+..
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~---~--~~----~~~---------------~~~~~ 77 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGE---Q--PH----ITS---------------QGDFK 77 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS---C--SE----EEE---------------ETTEE
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccC---C--cc----ccc---------------ccccc
Confidence 467999999999999999999999999999999999988763210 0 00 000 00000
Q ss_pred CCCCCCCCCeeEEeccccccccCC-CceeEEEecccccCc--chHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCc
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHP-NKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDS 275 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~-~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~ 275 (298)
.....++.+..+|+.++...+ ++||+|++..++++. ++...++++++++|||||+++.+. +.|.... ...+.
T Consensus 78 ---~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~-~~~~~~~-~~~~~ 152 (203)
T 1pjz_A 78 ---VYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT-LEYDQAL-LEGPP 152 (203)
T ss_dssp ---EEECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE-ESSCSSS-SSSCC
T ss_pred ---cccCCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE-EecCccc-cCCCC
Confidence 000137889999999987654 799999987666544 456679999999999999833221 1222111 11234
Q ss_pred cCCCHHHHHHHHHhCCCEEEE
Q psy3185 276 IEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 276 ~~ls~eEl~~~~~~~GF~i~~ 296 (298)
..++.+|+.+++.+ ||+++.
T Consensus 153 ~~~~~~el~~~~~~-gf~i~~ 172 (203)
T 1pjz_A 153 FSVPQTWLHRVMSG-NWEVTK 172 (203)
T ss_dssp CCCCHHHHHHTSCS-SEEEEE
T ss_pred CCCCHHHHHHHhcC-CcEEEE
Confidence 55899999999998 999865
No 2
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.83 E-value=1e-19 Score=160.24 Aligned_cols=174 Identities=16% Similarity=0.154 Sum_probs=120.1
Q ss_pred HHHHHHHHHHhhhccCChHH-HhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHH
Q psy3185 76 KVQTTLKQFVRDWSEEGSEE-RKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFML 154 (298)
Q Consensus 76 ~v~~~l~~~~RdWs~~g~~E-R~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml 154 (298)
.+.......+..|....... .......+++.+...++ ++.+|||+|||+|.++..+++.|.+|+|+|+|+.|+
T Consensus 15 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~ 88 (242)
T 3l8d_A 15 SAEKKWDSSAEFWNQNSQEMWDSGSRSTIIPFFEQYVK------KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMI 88 (242)
T ss_dssp -----------------CHHHHTSTTTTHHHHHHHHSC------TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHH
T ss_pred HHHHHHHhHHHHhhhhhhhccCcccHHHHHHHHHHHcC------CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHH
Confidence 34444444455555422211 11223347788888776 357999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccc
Q psy3185 155 FASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFI 234 (298)
Q Consensus 155 ~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffi 234 (298)
..++... ...++.+..+|+.++..++++||+|++...+
T Consensus 89 ~~a~~~~------------------------------------------~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 89 QKGKERG------------------------------------------EGPDLSFIKGDLSSLPFENEQFEAIMAINSL 126 (242)
T ss_dssp HHHHTTT------------------------------------------CBTTEEEEECBTTBCSSCTTCEEEEEEESCT
T ss_pred HHHHhhc------------------------------------------ccCCceEEEcchhcCCCCCCCccEEEEcChH
Confidence 8876410 0136889999999887678999999999999
Q ss_pred cCcchHHHHHHHHHHhccCCeEEEEeccc--c------ccccCCCCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 235 DCANNIVSFIETIFNILKPGGIWINLGPL--L------YHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 235 dta~n~~~yl~~I~~~LkpGG~~In~gPl--~------y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
++.++...++++++++|||||+++...+. . |............++.+++.++++++||+++..
T Consensus 127 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 127 EWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp TSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred hhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 99999999999999999999999854321 0 100000112334589999999999999999864
No 3
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.82 E-value=1.8e-19 Score=158.39 Aligned_cols=148 Identities=12% Similarity=0.093 Sum_probs=116.2
Q ss_pred hhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 99 CYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 99 ~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
.+..+++.+....+ +.+|||+|||+|.++..+++.|.+|+|+|+|+.|+..++...
T Consensus 29 ~~~~~~~~l~~~~~-------~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----------------- 84 (250)
T 2p7i_A 29 MHPFMVRAFTPFFR-------PGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRL----------------- 84 (250)
T ss_dssp HHHHHHHHHGGGCC-------SSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHS-----------------
T ss_pred HHHHHHHHHHhhcC-------CCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhh-----------------
Confidence 44556676665443 568999999999999999999999999999999999887521
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHH-HhccCCeEE
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIF-NILKPGGIW 257 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~-~~LkpGG~~ 257 (298)
+ .++.+..+|+.++ ..+++||+|++...+++.++...++++++ ++|||||++
T Consensus 85 ------------------------~--~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l 137 (250)
T 2p7i_A 85 ------------------------K--DGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRL 137 (250)
T ss_dssp ------------------------C--SCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEE
T ss_pred ------------------------h--CCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEE
Confidence 1 1577889999887 35789999999999999999999999999 999999999
Q ss_pred EEeccccc----------cccCC---------CCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 258 INLGPLLY----------HYSNM---------LNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 258 In~gPl~y----------~~~~~---------~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
+...|... ++... .......++.+++.++++++||+++..
T Consensus 138 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 138 FLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp EEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred EEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 86554321 10000 011224589999999999999999763
No 4
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.81 E-value=4.1e-19 Score=152.80 Aligned_cols=134 Identities=14% Similarity=0.105 Sum_probs=107.3
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|+++..|+++|..|+|+|+|+.|+..++...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-------------------------------------- 83 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH-------------------------------------- 83 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC--------------------------------------
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC--------------------------------------
Confidence 569999999999999999999999999999999999877510
Q ss_pred CCCCCCCCeeEEeccccccccCCCceeEEEecccccCcc--hHHHHHHHHHHhccCCeEEEEecccccccc--CCCCCCc
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCAN--NIVSFIETIFNILKPGGIWINLGPLLYHYS--NMLNEDS 275 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~--n~~~yl~~I~~~LkpGG~~In~gPl~y~~~--~~~~~~~ 275 (298)
.++.+..+|+.++...+++||+|++...+++.. ++..++++++++|||||.++...+..-... .......
T Consensus 84 ------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~ 157 (203)
T 3h2b_A 84 ------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATA 157 (203)
T ss_dssp ------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCE
T ss_pred ------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhh
Confidence 256788999988876779999999998888775 899999999999999999985432111100 0011123
Q ss_pred cCCCHHHHHHHHHhCCCEEEEe
Q psy3185 276 IEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 276 ~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
..++.+++.++++++||+++..
T Consensus 158 ~~~~~~~~~~~l~~~Gf~~~~~ 179 (203)
T 3h2b_A 158 YRWPLPELAQALETAGFQVTSS 179 (203)
T ss_dssp EECCHHHHHHHHHHTTEEEEEE
T ss_pred ccCCHHHHHHHHHHCCCcEEEE
Confidence 4578999999999999999763
No 5
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.80 E-value=1.2e-18 Score=157.94 Aligned_cols=140 Identities=16% Similarity=0.151 Sum_probs=110.9
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|+++..+++.|..|+|+|+|+.|+..++..+...
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------------- 113 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAK----------------------------------- 113 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC------------------------------------
T ss_pred CCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----------------------------------
Confidence 579999999999999999999999999999999999988743210
Q ss_pred CCCCCCCCeeEEeccccccc-cCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEecccc--------------
Q psy3185 200 SDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLL-------------- 264 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~-------------- 264 (298)
.+ ..++.+..+|+.++. ..+++||+|++...+++.++...++++++++|||||+++...|-.
T Consensus 114 -~~--~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~ 190 (285)
T 4htf_A 114 -GV--SDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFD 190 (285)
T ss_dssp -CC--GGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHH
T ss_pred -CC--CcceEEEEcCHHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHH
Confidence 00 137889999999886 467899999999999999999999999999999999998543310
Q ss_pred ccccCC------CCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 265 YHYSNM------LNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 265 y~~~~~------~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
+..... ...+...++.+++.++++++||+++..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~ 229 (285)
T 4htf_A 191 YVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGK 229 (285)
T ss_dssp HHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEE
T ss_pred HHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeee
Confidence 000000 112335589999999999999999854
No 6
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.80 E-value=5.3e-19 Score=159.52 Aligned_cols=148 Identities=11% Similarity=0.048 Sum_probs=104.2
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|+++..||++|++|+|+|+|+.|+..|+...+. .++ .+++.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~-----~~~----------------------~~~~~ 120 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNL-----SYT----------------------EEPLA 120 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTC-----CEE----------------------EEECT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhccc-----ccc----------------------ccccc
Confidence 467999999999999999999999999999999999988652110 000 00000
Q ss_pred CCC-C----CCCCCeeEEeccccccccCC-CceeEEEecccccCc--chHHHHHHHHHHhccCCeEEEEeccccccccCC
Q psy3185 199 TSD-Y----NDDCDFSMAAGDFLQVYVHP-NKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWINLGPLLYHYSNM 270 (298)
Q Consensus 199 ~~~-~----~~~~~~~~~~gDf~~~~~~~-~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~ 270 (298)
... . ....++.+.+||+.++...+ ++||+|++..+++.. ++...|++++.++|||||+++.+.. .|.....
T Consensus 121 ~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~-~~~~~~~ 199 (252)
T 2gb4_A 121 EIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL-SYDPTKH 199 (252)
T ss_dssp TSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE-ECCTTSC
T ss_pred ccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE-ecCCccC
Confidence 000 0 01147899999999987654 899999977665543 4567899999999999999853221 1211111
Q ss_pred CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 271 LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 271 ~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
..+...++.+|+.+++.. +|+++.
T Consensus 200 -~g~~~~~~~~el~~~l~~-~f~v~~ 223 (252)
T 2gb4_A 200 -AGPPFYVPSAELKRLFGT-KCSMQC 223 (252)
T ss_dssp -CCSSCCCCHHHHHHHHTT-TEEEEE
T ss_pred -CCCCCCCCHHHHHHHhhC-CeEEEE
Confidence 124455899999999987 699875
No 7
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.80 E-value=1.1e-18 Score=150.92 Aligned_cols=134 Identities=13% Similarity=0.163 Sum_probs=104.2
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|+++..+++.|.+|+|+|+|+.|+..++. .
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~---~----------------------------------- 87 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR---H----------------------------------- 87 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG---G-----------------------------------
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh---c-----------------------------------
Confidence 35699999999999999999999999999999999987754 1
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcch--HHHHHHHHHHhccCCeEEEEecccc--------ccc-
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANN--IVSFIETIFNILKPGGIWINLGPLL--------YHY- 267 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n--~~~yl~~I~~~LkpGG~~In~gPl~--------y~~- 267 (298)
. ..++.+..+|+.++ ..+++||+|++.+.+++.++ +..++++++++|||||.++...+-. |..
T Consensus 88 --~---~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~ 161 (218)
T 3ou2_A 88 --G---LDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSE 161 (218)
T ss_dssp --C---CTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC----------
T ss_pred --C---CCCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcc
Confidence 0 03688999999888 56789999999998888877 4899999999999999997543210 000
Q ss_pred ------cCCCCCC-----ccCCCHHHHHHHHHhCCCEEEE
Q psy3185 268 ------SNMLNED-----SIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 268 ------~~~~~~~-----~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
...+... ...++.+++.++++++||+++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 201 (218)
T 3ou2_A 162 PEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSV 201 (218)
T ss_dssp --CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred cccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEe
Confidence 0000011 1246999999999999999764
No 8
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.80 E-value=9.3e-19 Score=155.73 Aligned_cols=146 Identities=16% Similarity=0.202 Sum_probs=113.3
Q ss_pred HHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccc
Q psy3185 105 SEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNI 183 (298)
Q Consensus 105 ~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~ 183 (298)
..+.+.++. .++.+|||+|||+|.++..+++.|. .|+|+|+|+.|+..++....
T Consensus 34 ~~l~~~~~~----~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--------------------- 88 (253)
T 3g5l_A 34 HELKKMLPD----FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--------------------- 88 (253)
T ss_dssp HHHHTTCCC----CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---------------------
T ss_pred HHHHHhhhc----cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---------------------
Confidence 445666653 3578999999999999999999998 89999999999998876210
Q ss_pred cccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEec--
Q psy3185 184 LTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLG-- 261 (298)
Q Consensus 184 ~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~g-- 261 (298)
..++.+..+|+.++...+++||+|++...+++.+++..++++++++|||||.++...
T Consensus 89 ---------------------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 89 ---------------------SPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp ---------------------CTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---------------------cCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 137889999998887677999999999999988999999999999999999998542
Q ss_pred ccc-------ccccCCCC-----------------------CCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 262 PLL-------YHYSNMLN-----------------------EDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 262 Pl~-------y~~~~~~~-----------------------~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
|.. |.+..... ......|.+++.++++++||+++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~ 212 (253)
T 3g5l_A 148 PVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINS 212 (253)
T ss_dssp HHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEE
T ss_pred CccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeee
Confidence 211 11110000 001123999999999999999975
No 9
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.80 E-value=1e-18 Score=151.29 Aligned_cols=165 Identities=16% Similarity=0.167 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHhhhccCChHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHH
Q psy3185 75 EKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFML 154 (298)
Q Consensus 75 ~~v~~~l~~~~RdWs~~g~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml 154 (298)
..+.+.....+..|...... .+.+..+...++ ++.+|||+|||+|+++..+++.|..|+|+|+|+.|+
T Consensus 11 ~~~~~~~~~~~~~y~~~~~~------~~~~~~~~~~~~------~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~ 78 (211)
T 3e23_A 11 DDTLRFYRGNATAYAERQPR------SATLTKFLGELP------AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELA 78 (211)
T ss_dssp HHHHHHHHHSHHHHTTCCCC------CHHHHHHHTTSC------TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHhhccch------hHHHHHHHHhcC------CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHH
Confidence 34566666667777765433 234555555554 357999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccc
Q psy3185 155 FASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFI 234 (298)
Q Consensus 155 ~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffi 234 (298)
..++... ++.+..+|+..+. .+++||+|++...+
T Consensus 79 ~~a~~~~---------------------------------------------~~~~~~~d~~~~~-~~~~fD~v~~~~~l 112 (211)
T 3e23_A 79 AEASRRL---------------------------------------------GRPVRTMLFHQLD-AIDAYDAVWAHACL 112 (211)
T ss_dssp HHHHHHH---------------------------------------------TSCCEECCGGGCC-CCSCEEEEEECSCG
T ss_pred HHHHHhc---------------------------------------------CCceEEeeeccCC-CCCcEEEEEecCch
Confidence 9887621 2235667887776 67899999999888
Q ss_pred cCcc--hHHHHHHHHHHhccCCeEEEEecccccc-ccCCCCCCccCCCHHHHHHHHHhCC-CEEEEe
Q psy3185 235 DCAN--NIVSFIETIFNILKPGGIWINLGPLLYH-YSNMLNEDSIEPSYEVVKQVIQGLG-FVYEVE 297 (298)
Q Consensus 235 dta~--n~~~yl~~I~~~LkpGG~~In~gPl~y~-~~~~~~~~~~~ls~eEl~~~~~~~G-F~i~~~ 297 (298)
++.. ++..++++++++|||||+++...|.... ...........++.+++.++++++| |+++..
T Consensus 113 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 113 LHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred hhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 8776 8889999999999999999854332111 0011112334579999999999999 998753
No 10
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.79 E-value=9.2e-19 Score=154.29 Aligned_cols=135 Identities=19% Similarity=0.220 Sum_probs=108.4
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|+++..|++.|..|+|+|+|+.|+..++......
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------------- 111 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSS----------------------------------- 111 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTS-----------------------------------
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhcc-----------------------------------
Confidence 459999999999999999999999999999999999887633210
Q ss_pred CCCCCCCCeeEEeccccccccCCCceeEEEecccccCcc--hHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccC
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCAN--NIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIE 277 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~--n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ 277 (298)
+...++.+..+|+.++. .+++||+|++..++++.+ +...+++++.++|||||+++.... ........+...
T Consensus 112 ---~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~~~~~~~~~~~~ 184 (235)
T 3lcc_A 112 ---PKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY---PITDHVGGPPYK 184 (235)
T ss_dssp ---GGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC---CCSCCCSCSSCC
T ss_pred ---CCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe---cccccCCCCCcc
Confidence 00136889999998875 456999999998888776 899999999999999999985432 111112234566
Q ss_pred CCHHHHHHHHHhCCCEEEE
Q psy3185 278 PSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 278 ls~eEl~~~~~~~GF~i~~ 296 (298)
++.+++.+++++.||+++.
T Consensus 185 ~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 185 VDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp CCHHHHHHHHGGGTEEEEE
T ss_pred CCHHHHHHHHHHcCCeEEE
Confidence 8999999999999999875
No 11
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.79 E-value=2.1e-18 Score=149.80 Aligned_cols=138 Identities=12% Similarity=0.006 Sum_probs=111.1
Q ss_pred CCCeEEEecccCcHHHHHHHHcC---CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG---YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G---~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..+++.+ ..|+|+|+|+.|+..++..+...
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------- 85 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL------------------------------- 85 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH-------------------------------
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 46799999999999999999987 78999999999999988743220
Q ss_pred CCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCc
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDS 275 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~ 275 (298)
.+ .++.+..+|+.++...+++||+|++...+++.++...++++++++|||||.++...+...... ......
T Consensus 86 -----~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-~~~~~~ 156 (219)
T 3dh0_A 86 -----GL---KNVEVLKSEENKIPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERD-KGPPPE 156 (219)
T ss_dssp -----TC---TTEEEEECBTTBCSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCS-SSCCGG
T ss_pred -----CC---CcEEEEecccccCCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccc-cCCchh
Confidence 00 268889999988876778999999999999889999999999999999999986543221111 111234
Q ss_pred cCCCHHHHHHHHHhCCCEEEE
Q psy3185 276 IEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 276 ~~ls~eEl~~~~~~~GF~i~~ 296 (298)
..++.+++.++++++||+++.
T Consensus 157 ~~~~~~~~~~~l~~~Gf~~~~ 177 (219)
T 3dh0_A 157 EVYSEWEVGLILEDAGIRVGR 177 (219)
T ss_dssp GSCCHHHHHHHHHHTTCEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEE
Confidence 558999999999999999875
No 12
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.78 E-value=1.8e-18 Score=150.35 Aligned_cols=147 Identities=20% Similarity=0.259 Sum_probs=111.8
Q ss_pred hhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 99 CYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 99 ~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
.|..+++.+... ++.+|||+|||+|+++..++++|.+|+|+|+|+.|+..++..+
T Consensus 33 ~~~~~l~~~~~~--------~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~----------------- 87 (220)
T 3hnr_A 33 HYEDILEDVVNK--------SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKL----------------- 87 (220)
T ss_dssp THHHHHHHHHHT--------CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHS-----------------
T ss_pred HHHHHHHHhhcc--------CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhC-----------------
Confidence 344566655431 3679999999999999999999999999999999999887521
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHH--HHHHHHHhccCCeE
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVS--FIETIFNILKPGGI 256 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~--yl~~I~~~LkpGG~ 256 (298)
+ .++.+..+|+.+++.. ++||+|++...+++.++... ++++++++|||||.
T Consensus 88 ------------------------~--~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 140 (220)
T 3hnr_A 88 ------------------------P--KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGK 140 (220)
T ss_dssp ------------------------C--TTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCE
T ss_pred ------------------------C--CceEEEeCChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCE
Confidence 0 2567888999888665 89999999999998888766 99999999999999
Q ss_pred EEEeccccccccC----------CC-------CCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 257 WINLGPLLYHYSN----------ML-------NEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 257 ~In~gPl~y~~~~----------~~-------~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
++...|..-.... .. ......++.+++.++++++||+++..
T Consensus 141 l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 198 (220)
T 3hnr_A 141 IVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFT 198 (220)
T ss_dssp EEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEE
T ss_pred EEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEe
Confidence 9865442111000 00 00123358999999999999998754
No 13
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.78 E-value=1.8e-18 Score=156.75 Aligned_cols=138 Identities=17% Similarity=0.225 Sum_probs=103.5
Q ss_pred CCCeEEEecccCcHHHHHHHHc----CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR----GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTF 194 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~----G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~i 194 (298)
++.+|||+|||+|+++..||++ |++|+|+|+|+.|+..|+..+...
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~------------------------------ 119 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY------------------------------ 119 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS------------------------------
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh------------------------------
Confidence 4789999999999999999986 678999999999999998743210
Q ss_pred CCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcc--hHHHHHHHHHHhccCCeEEEEecccc--------
Q psy3185 195 PDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCAN--NIVSFIETIFNILKPGGIWINLGPLL-------- 264 (298)
Q Consensus 195 pd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~--n~~~yl~~I~~~LkpGG~~In~gPl~-------- 264 (298)
....++.+..||+.+++. +.||+|++.+.++..+ +...+|++|+++|||||++|...+..
T Consensus 120 --------~~~~~v~~~~~D~~~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~ 189 (261)
T 4gek_A 120 --------KAPTPVDVIEGDIRDIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGE 189 (261)
T ss_dssp --------CCSSCEEEEESCTTTCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHH
T ss_pred --------ccCceEEEeecccccccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHH
Confidence 112478999999998854 5699999988887654 45679999999999999998643321
Q ss_pred -----cc-------ccCCCC--------CCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 265 -----YH-------YSNMLN--------EDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 265 -----y~-------~~~~~~--------~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
|+ +....- .....+|.+++.++++++||+.+.
T Consensus 190 ~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve 241 (261)
T 4gek_A 190 LLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSE 241 (261)
T ss_dssp HHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEE
Confidence 11 100000 012346899999999999998653
No 14
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.78 E-value=2.7e-18 Score=153.45 Aligned_cols=139 Identities=14% Similarity=0.094 Sum_probs=109.3
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+++.+..|+|+|+|+.|+..++......
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~---------------------------------- 82 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGN---------------------------------- 82 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc----------------------------------
Confidence 4679999999999999999999999999999999999888743210
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccc----------c
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHY----------S 268 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~----------~ 268 (298)
.+ .++.+..+|+.+++.++++||+|++.+.+++.++...++++++++|||||.++...+..-.. .
T Consensus 83 --~~---~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~ 157 (260)
T 1vl5_A 83 --GH---QQVEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVE 157 (260)
T ss_dssp --TC---CSEEEEECCC-CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHH
T ss_pred --CC---CceEEEEecHHhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHH
Confidence 00 26889999999887777999999999999999999999999999999999998543211000 0
Q ss_pred C-CCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 269 N-MLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 269 ~-~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
. ........++.+++.++++++||+++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 186 (260)
T 1vl5_A 158 KERDYSHHRAWKKSDWLKMLEEAGFELEE 186 (260)
T ss_dssp HHHCTTCCCCCBHHHHHHHHHHHTCEEEE
T ss_pred HhcCccccCCCCHHHHHHHHHHCCCeEEE
Confidence 0 001123457899999999999999865
No 15
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.78 E-value=6.2e-18 Score=146.60 Aligned_cols=168 Identities=16% Similarity=0.209 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHhhhccCCh----HHHh-hhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeC
Q psy3185 75 EKVQTTLKQFVRDWSEEGS----EERK-TCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEF 149 (298)
Q Consensus 75 ~~v~~~l~~~~RdWs~~g~----~ER~-~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~ 149 (298)
.++.+.....+..|..... ..+. .....+++.+.. .++.+|||+|||+|.++..+++.|..|+|+|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~ 82 (227)
T 3e8s_A 11 DALLDSWHQNAQAWIDAVRHGAIESRRQVTDQAILLAILG--------RQPERVLDLGCGEGWLLRALADRGIEAVGVDG 82 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHTHHHHHHHHHHH--------TCCSEEEEETCTTCHHHHHHHTTTCEEEEEES
T ss_pred HHHHHHHHhhHHHHHHHhcccccccccccccHHHHHHhhc--------CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcC
Confidence 4566777777777765221 1211 122234444432 13579999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEecccccc---cc-CCCce
Q psy3185 150 SLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQV---YV-HPNKW 225 (298)
Q Consensus 150 S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~---~~-~~~~f 225 (298)
|+.|+..++.. .+..+..+|+.++ .. ..++|
T Consensus 83 s~~~~~~a~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 83 DRTLVDAARAA---------------------------------------------GAGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp CHHHHHHHHHT---------------------------------------------CSSCEEECCHHHHHTTCSCCCCCE
T ss_pred CHHHHHHHHHh---------------------------------------------cccccchhhHHhhcccccccCCCc
Confidence 99999988751 1234556666655 22 34569
Q ss_pred eEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccC--------------CC----CCCccCCCHHHHHHHH
Q psy3185 226 DCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSN--------------ML----NEDSIEPSYEVVKQVI 287 (298)
Q Consensus 226 D~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~--------------~~----~~~~~~ls~eEl~~~~ 287 (298)
|+|++.+.++ ..++..++++++++|||||+++...|..+.... .. ......+|.+++.+++
T Consensus 118 D~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (227)
T 3e8s_A 118 DLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNAL 196 (227)
T ss_dssp EEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHH
T ss_pred cEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHH
Confidence 9999998888 788899999999999999999865442211110 00 0011235999999999
Q ss_pred HhCCCEEEE
Q psy3185 288 QGLGFVYEV 296 (298)
Q Consensus 288 ~~~GF~i~~ 296 (298)
+++||+++.
T Consensus 197 ~~aGf~~~~ 205 (227)
T 3e8s_A 197 DMAGLRLVS 205 (227)
T ss_dssp HHTTEEEEE
T ss_pred HHcCCeEEE
Confidence 999999985
No 16
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.77 E-value=7e-18 Score=150.14 Aligned_cols=150 Identities=17% Similarity=0.176 Sum_probs=115.1
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
++..+.+.++. .++.+|||+|||+|.++..+++. |..|+|+|+|+.|+..++....
T Consensus 43 ~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------------------- 99 (266)
T 3ujc_A 43 ATKKILSDIEL----NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVS------------------- 99 (266)
T ss_dssp HHHHHTTTCCC----CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCC-------------------
T ss_pred HHHHHHHhcCC----CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhh-------------------
Confidence 34455554442 35679999999999999999998 8999999999999998876211
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCc--chHHHHHHHHHHhccCCeEEEE
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~In 259 (298)
...++.+..+|+.+++.++++||+|++...+++. ++...++++++++|||||.++.
T Consensus 100 ----------------------~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 100 ----------------------GNNKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp ----------------------SCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ----------------------cCCCeEEEECccccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEE
Confidence 0037889999999887678999999999999888 8999999999999999999986
Q ss_pred eccccccccCCC--------CCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 260 LGPLLYHYSNML--------NEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 260 ~gPl~y~~~~~~--------~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
..|......... ......++.+++.++++++||+++..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 203 (266)
T 3ujc_A 158 TDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVS 203 (266)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred EEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEE
Confidence 544211100000 01223578999999999999998753
No 17
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.77 E-value=3.4e-18 Score=153.10 Aligned_cols=107 Identities=19% Similarity=0.189 Sum_probs=89.9
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
.+++.+....+ ++.+|||+|||+|+++..+++.|.+|+|+|+|+.|+..++...
T Consensus 39 ~~~~~l~~~~~------~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-------------------- 92 (263)
T 3pfg_A 39 DLAALVRRHSP------KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRN-------------------- 92 (263)
T ss_dssp HHHHHHHHHCT------TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHC--------------------
T ss_pred HHHHHHHhhCC------CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhC--------------------
Confidence 46667776665 3579999999999999999999999999999999999887520
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecc-cccCc---chHHHHHHHHHHhccCCeEE
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCF-FIDCA---NNIVSFIETIFNILKPGGIW 257 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~f-fidta---~n~~~yl~~I~~~LkpGG~~ 257 (298)
.++.+..+|+.++.. +++||+|++.+ .+++. .++..++++++++|||||++
T Consensus 93 ------------------------~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l 147 (263)
T 3pfg_A 93 ------------------------PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVV 147 (263)
T ss_dssp ------------------------TTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEE
T ss_pred ------------------------CCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEE
Confidence 156788899988765 78999999987 77766 46778999999999999999
Q ss_pred EE
Q psy3185 258 IN 259 (298)
Q Consensus 258 In 259 (298)
+.
T Consensus 148 ~i 149 (263)
T 3pfg_A 148 VV 149 (263)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 18
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.77 E-value=4.3e-18 Score=151.26 Aligned_cols=154 Identities=18% Similarity=0.109 Sum_probs=116.4
Q ss_pred hHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 100 YEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 100 ~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
+...++.+.+.++. .++.+|||+|||+|.++..+|+. |..|+|+|+|+.|+..++......
T Consensus 21 ~~~~~~~l~~~~~~----~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~-------------- 82 (256)
T 1nkv_A 21 TEEKYATLGRVLRM----KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEEL-------------- 82 (256)
T ss_dssp CHHHHHHHHHHTCC----CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHT--------------
T ss_pred CHHHHHHHHHhcCC----CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhc--------------
Confidence 34456666666653 35679999999999999999987 789999999999999988743210
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
.+ ..++.+..+|+.++++ +++||+|++...+++.+++..++++++++|||||.++
T Consensus 83 ----------------------~~--~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~ 137 (256)
T 1nkv_A 83 ----------------------GV--SERVHFIHNDAAGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIML 137 (256)
T ss_dssp ----------------------TC--TTTEEEEESCCTTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEE
T ss_pred ----------------------CC--CcceEEEECChHhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEE
Confidence 00 1378899999998876 7899999998888888889999999999999999998
Q ss_pred EeccccccccC--------CCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 259 NLGPLLYHYSN--------MLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 259 n~gPl~y~~~~--------~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
...|....... ........++.+++.++++++||+++.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 183 (256)
T 1nkv_A 138 IGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVE 183 (256)
T ss_dssp EEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCE
T ss_pred EecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEE
Confidence 65542110000 001122457899999999999998754
No 19
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.77 E-value=6.7e-18 Score=148.51 Aligned_cols=145 Identities=15% Similarity=0.198 Sum_probs=110.4
Q ss_pred HHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccccc
Q psy3185 106 EILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNIL 184 (298)
Q Consensus 106 ~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~ 184 (298)
.+...++. .++.+|||+|||+|.++..+++.|. .|+|+|+|+.|+..++....
T Consensus 34 ~l~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---------------------- 87 (243)
T 3bkw_A 34 ALRAMLPE----VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGP---------------------- 87 (243)
T ss_dssp HHHHHSCC----CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC----------------------
T ss_pred HHHHhccc----cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcc----------------------
Confidence 34555542 2467999999999999999999999 89999999999998875110
Q ss_pred ccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEecccc
Q psy3185 185 THHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLL 264 (298)
Q Consensus 185 ~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~ 264 (298)
..++.+..+|+.++...+++||+|++...+++.++...++++++++|||||+++...|..
T Consensus 88 --------------------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 88 --------------------DTGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp --------------------SSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred --------------------cCCceEEEcChhhccCCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 026788999998876667899999999988888899999999999999999998533210
Q ss_pred ---------ccccCCC----------------------CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 265 ---------YHYSNML----------------------NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 265 ---------y~~~~~~----------------------~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
|...... .......|.+++.++++++||+++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~ 210 (243)
T 3bkw_A 148 IYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEH 210 (243)
T ss_dssp HHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEE
T ss_pred ccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeee
Confidence 1100000 0011125899999999999999875
No 20
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.77 E-value=1.3e-18 Score=153.89 Aligned_cols=145 Identities=14% Similarity=0.122 Sum_probs=108.7
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+.+.+...++.. .++.+|||+|||+|.++..+++.|.+|+|+|+|+.|+..++.
T Consensus 28 ~~~~~~~~l~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~----------------------- 81 (240)
T 3dli_A 28 VKARLRRYIPYF---KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEG----------------------- 81 (240)
T ss_dssp HHHHHGGGGGGT---TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHhhh---cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHh-----------------------
Confidence 445555444421 246799999999999999999999999999999999987653
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEecccccc--ccCCCceeEEEecccccCcc--hHHHHHHHHHHhccCCeEEE
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQV--YVHPNKWDCVATCFFIDCAN--NIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~--~~~~~~fD~V~t~ffidta~--n~~~yl~~I~~~LkpGG~~I 258 (298)
++.+..+|+.++ ...+++||+|++...+++.. ++..++++++++|||||+++
T Consensus 82 ------------------------~~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (240)
T 3dli_A 82 ------------------------KFNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIV 137 (240)
T ss_dssp ------------------------TSEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEE
T ss_pred ------------------------hcceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEE
Confidence 134566676664 34578999999999888777 67999999999999999998
Q ss_pred Eecccccccc-----CCCCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 259 NLGPLLYHYS-----NMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 259 n~gPl~y~~~-----~~~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
...|...... -........++.+++.++++++||+++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 138 IESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp EEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred EEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 6544211100 00112345688999999999999998753
No 21
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.77 E-value=8.8e-18 Score=144.30 Aligned_cols=133 Identities=17% Similarity=0.249 Sum_probs=103.5
Q ss_pred eEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCC
Q psy3185 122 NILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSD 201 (298)
Q Consensus 122 ~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~ 201 (298)
+|||+|||+|+++..+++.|+.|+|+|+|+.|+..++......
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------------- 74 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEK------------------------------------- 74 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHH-------------------------------------
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhc-------------------------------------
Confidence 9999999999999999999999999999999999888743210
Q ss_pred CCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccc---cCCCCCCccCC
Q psy3185 202 YNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHY---SNMLNEDSIEP 278 (298)
Q Consensus 202 ~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~---~~~~~~~~~~l 278 (298)
..++.+..+|+.++..++++||+|++++...+..+...+++++.++|||||+++...+..... ...+..+...+
T Consensus 75 ---~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 151 (202)
T 2kw5_A 75 ---GVKITTVQSNLADFDIVADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLP 151 (202)
T ss_dssp ---TCCEEEECCBTTTBSCCTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCC
T ss_pred ---CCceEEEEcChhhcCCCcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeec
Confidence 025678888888876667899999987644455678899999999999999998654321111 11112234678
Q ss_pred CHHHHHHHHHhCCCEEEE
Q psy3185 279 SYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 279 s~eEl~~~~~~~GF~i~~ 296 (298)
+.+|+.++++ ||+++.
T Consensus 152 ~~~~l~~~l~--Gf~v~~ 167 (202)
T 2kw5_A 152 KLETLQSELP--SLNWLI 167 (202)
T ss_dssp CHHHHHHHCS--SSCEEE
T ss_pred CHHHHHHHhc--CceEEE
Confidence 9999999998 999875
No 22
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.76 E-value=1.1e-17 Score=146.93 Aligned_cols=151 Identities=16% Similarity=0.175 Sum_probs=112.8
Q ss_pred HHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 101 EPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 101 ~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
..+.+.+...++. ..++.+|||+|||+|.++..+++. +.+|+|+|+|+.|+..++....
T Consensus 29 ~~~~~~~~~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---------------- 89 (234)
T 3dtn_A 29 DDFYGVSVSIASV---DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFR---------------- 89 (234)
T ss_dssp HHHHHHHHHTCCC---SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTC----------------
T ss_pred HHHHHHHHHHhhc---CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhc----------------
Confidence 3345556665542 135689999999999999999998 7899999999999998876211
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHH--HHHHHHHHhccCCeE
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIV--SFIETIFNILKPGGI 256 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~--~yl~~I~~~LkpGG~ 256 (298)
...++.+..+|+.++... ++||+|++...+++..+.. .++++++++|||||.
T Consensus 90 -------------------------~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 143 (234)
T 3dtn_A 90 -------------------------GNLKVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGI 143 (234)
T ss_dssp -------------------------SCTTEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred -------------------------cCCCEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcE
Confidence 012788999999988755 8999999998888776554 699999999999999
Q ss_pred EEEecccc-------------c-------cccC-------CCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 257 WINLGPLL-------------Y-------HYSN-------MLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 257 ~In~gPl~-------------y-------~~~~-------~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
++...+.. | ++.. ........++.+++.++++++||+.++
T Consensus 144 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~ 210 (234)
T 3dtn_A 144 FINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVS 210 (234)
T ss_dssp EEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEE
T ss_pred EEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCcee
Confidence 98643321 1 0000 000233457899999999999999875
No 23
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.76 E-value=1.1e-17 Score=142.48 Aligned_cols=136 Identities=14% Similarity=0.128 Sum_probs=105.1
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|+++..+++.|++|+|+|+|+.|+..++......
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~---------------------------------- 77 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIE---------------------------------- 77 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------------------------
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhC----------------------------------
Confidence 3569999999999999999999999999999999999888743210
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcc--hHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCcc
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCAN--NIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSI 276 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~--n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~ 276 (298)
.+ .++.+..+|+.++.. +++||+|++...+++.+ +...+++.+.++|||||.++.+.+..-.....+.....
T Consensus 78 --~~---~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~ 151 (199)
T 2xvm_A 78 --NL---DNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPF 151 (199)
T ss_dssp --TC---TTEEEEECCGGGCCC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSC
T ss_pred --CC---CCcEEEEcchhhCCC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCC
Confidence 00 257889999988765 78999999988777555 88999999999999999987554432111111112345
Q ss_pred CCCHHHHHHHHHhCCCEEEE
Q psy3185 277 EPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 277 ~ls~eEl~~~~~~~GF~i~~ 296 (298)
.++.+|+.++++. |+++.
T Consensus 152 ~~~~~~l~~~~~~--f~~~~ 169 (199)
T 2xvm_A 152 AFKEGELRRYYEG--WERVK 169 (199)
T ss_dssp CBCTTHHHHHTTT--SEEEE
T ss_pred ccCHHHHHHHhcC--CeEEE
Confidence 6799999999976 98875
No 24
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.76 E-value=1.8e-17 Score=148.77 Aligned_cols=153 Identities=13% Similarity=0.102 Sum_probs=117.1
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTD 180 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s 180 (298)
.+++.+.+.++. .++.+|||+|||+|.++..+++. |.+|+|+|+|+.|+..++......
T Consensus 48 ~~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~---------------- 107 (273)
T 3bus_A 48 RLTDEMIALLDV----RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAA---------------- 107 (273)
T ss_dssp HHHHHHHHHSCC----CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHHhcCC----CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhc----------------
Confidence 355666666653 24679999999999999999985 889999999999999887643210
Q ss_pred ccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe
Q psy3185 181 NNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 181 ~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~ 260 (298)
.+ ..++.+..+|+.+++.++++||+|++...+++.++...++++++++|||||.++..
T Consensus 108 --------------------~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 165 (273)
T 3bus_A 108 --------------------GL--ANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIA 165 (273)
T ss_dssp --------------------TC--TTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEE
T ss_pred --------------------CC--CcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEE
Confidence 00 13688999999988777789999999999999999999999999999999999754
Q ss_pred ccccccccC-----------CCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 261 GPLLYHYSN-----------MLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 261 gPl~y~~~~-----------~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.+....... ........++.+++.++++++||+++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 212 (273)
T 3bus_A 166 DFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTS 212 (273)
T ss_dssp EEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred EeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEE
Confidence 332110000 000123458899999999999999875
No 25
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.76 E-value=1.4e-17 Score=151.58 Aligned_cols=141 Identities=16% Similarity=0.131 Sum_probs=111.3
Q ss_pred CCCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+++. |..|+|+|+|+.|+..++......
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------------------------- 128 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQA--------------------------------- 128 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHH---------------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc---------------------------------
Confidence 4679999999999999999998 899999999999999888743210
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCC------
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNML------ 271 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~------ 271 (298)
.+ ..++.+..+|+.+++.++++||+|++...+++.++...++++++++|||||+++...|...+.....
T Consensus 129 ---~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 203 (297)
T 2o57_A 129 ---GL--ADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPIL 203 (297)
T ss_dssp ---TC--TTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHH
T ss_pred ---CC--CcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHH
Confidence 00 1368899999999877788999999999999889999999999999999999986654321110000
Q ss_pred --CCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 272 --NEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 272 --~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
.......+.+++.++++++||+++..
T Consensus 204 ~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 204 DRIKLHDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp HHHTCSSCCCHHHHHHHHHHTTEEEEEE
T ss_pred HHhcCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 00122458999999999999998753
No 26
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.76 E-value=9e-18 Score=152.05 Aligned_cols=141 Identities=16% Similarity=0.190 Sum_probs=106.4
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|+++..+++.|. .|+|+|+|+.|+..++..+...
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------------------------- 110 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNM--------------------------------- 110 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTS---------------------------------
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc---------------------------------
Confidence 467999999999999999999987 8999999999999888743210
Q ss_pred CCCCCCCCCCeeEEecccccccc-CCCceeEEEecccccC----cchHHHHHHHHHHhccCCeEEEEecccc--------
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV-HPNKWDCVATCFFIDC----ANNIVSFIETIFNILKPGGIWINLGPLL-------- 264 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~-~~~~fD~V~t~ffidt----a~n~~~yl~~I~~~LkpGG~~In~gPl~-------- 264 (298)
....++.+..+|+.+... .+++||+|++.+.+++ .++...++++++++|||||+++...|-.
T Consensus 111 -----~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 185 (298)
T 1ri5_A 111 -----KRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYK 185 (298)
T ss_dssp -----CCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHH
T ss_pred -----CCCccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHc
Confidence 001367889999988765 5789999999877744 6788899999999999999998543321
Q ss_pred --------c------------------cccCCC---CCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 265 --------Y------------------HYSNML---NEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 265 --------y------------------~~~~~~---~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
| ++.... ..+...++.+++.++++++||+++..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~ 247 (298)
T 1ri5_A 186 QGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVER 247 (298)
T ss_dssp HTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEE
T ss_pred cCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEe
Confidence 1 100000 00113468999999999999998753
No 27
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.76 E-value=2.6e-18 Score=148.17 Aligned_cols=154 Identities=18% Similarity=0.215 Sum_probs=115.3
Q ss_pred hHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 100 YEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 100 ~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
|..+.+.+.+.++. ++.+|||+|||+|.++..++++ |..|+|+|+|+.|+..++..+...
T Consensus 29 ~~~~~~~~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-------------- 89 (219)
T 3dlc_A 29 YPIIAENIINRFGI-----TAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADA-------------- 89 (219)
T ss_dssp HHHHHHHHHHHHCC-----CEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHT--------------
T ss_pred cHHHHHHHHHhcCC-----CCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhc--------------
Confidence 44466667666653 2339999999999999999998 779999999999999988743320
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
....++.+..+|+.++..++++||+|++...+++.++...++++++++|||||+++
T Consensus 90 ------------------------~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 145 (219)
T 3dlc_A 90 ------------------------NLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTY 145 (219)
T ss_dssp ------------------------TCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred ------------------------cccCceEEEEcCHHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEE
Confidence 00137889999999987777999999999988888999999999999999999988
Q ss_pred Eecccccc---------cc-CCCC------CCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 259 NLGPLLYH---------YS-NMLN------EDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 259 n~gPl~y~---------~~-~~~~------~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
...+..-. .. ..+. .....++.+++.++++++||+++.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 199 (219)
T 3dlc_A 146 IGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYE 199 (219)
T ss_dssp EEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEE
T ss_pred EEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEE
Confidence 64332100 00 0000 011224779999999999997653
No 28
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=4.4e-18 Score=151.27 Aligned_cols=144 Identities=15% Similarity=0.093 Sum_probs=110.6
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTD 180 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s 180 (298)
....+.+.++. .++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++...
T Consensus 21 ~~~~l~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------------------- 77 (259)
T 2p35_A 21 PARDLLAQVPL----ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------------------- 77 (259)
T ss_dssp HHHHHHTTCCC----SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-------------------
T ss_pred HHHHHHHhcCC----CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-------------------
Confidence 33455555542 34679999999999999999998 889999999999999877510
Q ss_pred ccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe
Q psy3185 181 NNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 181 ~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~ 260 (298)
.++.+..+|+.++. .+++||+|++.+.+++.++...++++++++|||||.++..
T Consensus 78 -------------------------~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 78 -------------------------PNTNFGKADLATWK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp -------------------------TTSEEEECCTTTCC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEE
T ss_pred -------------------------CCcEEEECChhhcC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEE
Confidence 25678889998876 6789999999999999999999999999999999999864
Q ss_pred cccccc---------------ccCC-C---CCCccCCCHHHHHHHHHhCCCEEE
Q psy3185 261 GPLLYH---------------YSNM-L---NEDSIEPSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 261 gPl~y~---------------~~~~-~---~~~~~~ls~eEl~~~~~~~GF~i~ 295 (298)
.|-.+. +... . ......++.+++.++++++||++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~ 185 (259)
T 2p35_A 132 MPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSRVD 185 (259)
T ss_dssp EECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEEEE
T ss_pred eCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCceE
Confidence 432110 0000 0 012344789999999999999864
No 29
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.76 E-value=1.3e-17 Score=147.63 Aligned_cols=139 Identities=13% Similarity=0.165 Sum_probs=109.9
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+++.+..|+|+|+|+.|+..++......
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~---------------------------------- 66 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEK---------------------------------- 66 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHH----------------------------------
T ss_pred CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc----------------------------------
Confidence 5679999999999999999999999999999999999887643210
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEecccccc------ccC---
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYH------YSN--- 269 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~------~~~--- 269 (298)
.+ .++.+..+|+.+++..+++||+|++.+.+++..++..++++++++|||||.++...+..-. +..
T Consensus 67 --~~---~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~ 141 (239)
T 1xxl_A 67 --GV---ENVRFQQGTAESLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLN 141 (239)
T ss_dssp --TC---CSEEEEECBTTBCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHH
T ss_pred --CC---CCeEEEecccccCCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHH
Confidence 00 2678899999888767789999999998888889999999999999999999854332100 000
Q ss_pred --CCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 270 --MLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 270 --~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
........++.+++.++++++||+++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~ll~~aGf~~~~ 170 (239)
T 1xxl_A 142 RLRDPSHVRESSLSEWQAMFSANQLAYQD 170 (239)
T ss_dssp HHHCTTCCCCCBHHHHHHHHHHTTEEEEE
T ss_pred HhccccccCCCCHHHHHHHHHHCCCcEEE
Confidence 001123457899999999999999875
No 30
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.75 E-value=3.7e-18 Score=154.48 Aligned_cols=133 Identities=20% Similarity=0.147 Sum_probs=105.2
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+++.|..|+|+|+|+.|+..++...
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------------------------------------- 99 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY------------------------------------- 99 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC-------------------------------------
Confidence 4679999999999999999999999999999999999876510
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccc-------------
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLY------------- 265 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y------------- 265 (298)
.++.+..+|+.+++. +++||+|++.+.+++..+...++++++++|||||.++...|...
T Consensus 100 -------~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~ 171 (279)
T 3ccf_A 100 -------PHLHFDVADARNFRV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNAL 171 (279)
T ss_dssp -------TTSCEEECCTTTCCC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHH
T ss_pred -------CCCEEEECChhhCCc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHH
Confidence 145678888888764 68999999999999889999999999999999999875433110
Q ss_pred ---cccC-CCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 266 ---HYSN-MLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 266 ---~~~~-~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
+... ....+...++.+++.++++++||+++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 206 (279)
T 3ccf_A 172 ETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTY 206 (279)
T ss_dssp HHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEE
T ss_pred HhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEE
Confidence 0000 001123456899999999999999875
No 31
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.75 E-value=2.5e-17 Score=143.71 Aligned_cols=144 Identities=15% Similarity=0.203 Sum_probs=108.9
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|+++..+++.|..|+|+|+|+.|+..++..... . .++.
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~---~-------------------------~~~~-- 79 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARS---P-------------------------GLNQ-- 79 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTC---C-------------------------SCCS--
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHh---c-------------------------CCcc--
Confidence 367999999999999999999999999999999999988763221 0 0000
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHH---HHHHHHHHhccCCeEEEEecccc-----------
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIV---SFIETIFNILKPGGIWINLGPLL----------- 264 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~---~yl~~I~~~LkpGG~~In~gPl~----------- 264 (298)
....++.+..+|+..+...+++||+|++...+++..+.. .++++++++|||||+++...+..
T Consensus 80 ----~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~ 155 (235)
T 3sm3_A 80 ----KTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRY 155 (235)
T ss_dssp ----SSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHH
T ss_pred ----ccCcceEEEEecccccCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHh
Confidence 011478899999998877789999999998888777666 89999999999999998643310
Q ss_pred ------------ccccCC-CC---CCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 265 ------------YHYSNM-LN---EDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 265 ------------y~~~~~-~~---~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
|...+. .. .....++.+++.++++++||+++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~ 203 (235)
T 3sm3_A 156 LHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDY 203 (235)
T ss_dssp HHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEE
T ss_pred hhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEE
Confidence 000000 00 012357999999999999999975
No 32
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.75 E-value=7.8e-18 Score=149.95 Aligned_cols=168 Identities=16% Similarity=0.175 Sum_probs=108.8
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|+++..+++.|+ .|+|+|+|+.|+..++..+.... ..+...|+....++.....+ ..++.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~ 128 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEP--GAFDWSPVVTYVCDLEGNRM-----KGPEK 128 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCT--TCCCCHHHHHHHHHHTTTCS-----CHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCC--ccccchhhhhhhhccccccc-----chHHH
Confidence 467999999999999999999998 89999999999998877443210 00000000000000000000 00000
Q ss_pred CCCCCCCCCCe-eEEecccccccc-CC---CceeEEEeccccc----CcchHHHHHHHHHHhccCCeEEEEecccccccc
Q psy3185 198 NTSDYNDDCDF-SMAAGDFLQVYV-HP---NKWDCVATCFFID----CANNIVSFIETIFNILKPGGIWINLGPLLYHYS 268 (298)
Q Consensus 198 ~~~~~~~~~~~-~~~~gDf~~~~~-~~---~~fD~V~t~ffid----ta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~ 268 (298)
.. .+ ..++ .+..+|+.+... .+ ++||+|++.+.++ +.+++..++++++++|||||++|...++...+.
T Consensus 129 ~~-~l--~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~ 205 (265)
T 2i62_A 129 EE-KL--RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYY 205 (265)
T ss_dssp HH-HH--HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE
T ss_pred HH-Hh--hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceE
Confidence 00 00 0126 788888877643 34 7999999999888 777899999999999999999986554321111
Q ss_pred CCCC--CCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 269 NMLN--EDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 269 ~~~~--~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.... .....++.+++.++++++||+++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 235 (265)
T 2i62_A 206 MIGEQKFSSLPLGWETVRDAVEEAGYTIEQ 235 (265)
T ss_dssp EETTEEEECCCCCHHHHHHHHHHTTCEEEE
T ss_pred EcCCccccccccCHHHHHHHHHHCCCEEEE
Confidence 0001 123457899999999999999875
No 33
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.75 E-value=2.6e-17 Score=146.26 Aligned_cols=151 Identities=12% Similarity=-0.002 Sum_probs=113.9
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
....+...++.. .++.+|||+|||+|.++..+++.+. .|+|+|+|+.|+..++......
T Consensus 33 ~~~~~l~~l~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------- 92 (257)
T 3f4k_A 33 ATRKAVSFINEL---TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKA----------------- 92 (257)
T ss_dssp HHHHHHTTSCCC---CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHHHhcC---CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 445555555321 3467999999999999999999965 8999999999999888743210
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEec
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLG 261 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~g 261 (298)
.+ ..++.+..+|+.+++..+++||+|++...+++. +...++++++++|||||+++...
T Consensus 93 -------------------~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 93 -------------------NC--ADRVKGITGSMDNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp -------------------TC--TTTEEEEECCTTSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -------------------CC--CCceEEEECChhhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 01 135889999998887677999999999888887 78899999999999999998655
Q ss_pred cccccccCCCC--------CCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 262 PLLYHYSNMLN--------EDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 262 Pl~y~~~~~~~--------~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
|. |....... ...-..+.+++.++++++||+++.
T Consensus 151 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 151 AS-WFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp EE-ESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred ee-ccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 43 11110000 011246899999999999999875
No 34
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.75 E-value=3.9e-18 Score=153.75 Aligned_cols=185 Identities=16% Similarity=0.132 Sum_probs=113.1
Q ss_pred hHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 100 YEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 100 ~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
...+++.+.+.+... ..++.+|||+|||+|.++..++..|+ .|+|+|+|+.|+..++..++.. ...+...|.+..
T Consensus 38 ~~~~~~~~~~~~~~~--~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~--~~~~d~s~~~~~ 113 (263)
T 2a14_A 38 LKFNLECLHKTFGPG--GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKE--PGAYDWTPAVKF 113 (263)
T ss_dssp HHHHHHHHHHHHSTT--SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTC--TTCCCCHHHHHH
T ss_pred HHHHHHHHHHHhcCC--CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcC--CCcccchHHHHH
Confidence 345556666655211 13567999999999999998889998 4999999999999998744321 001111111100
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCee-EEecccccc-cc---CCCceeEEEecccccCc----chHHHHHHHHHH
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFS-MAAGDFLQV-YV---HPNKWDCVATCFFIDCA----NNIVSFIETIFN 249 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~-~~~gDf~~~-~~---~~~~fD~V~t~ffidta----~n~~~yl~~I~~ 249 (298)
-++.-...+. +++... .+ ..++. +..+|..+. +. ..++||+|++.+.++++ ++....+++|++
T Consensus 114 ~~~~~~~~~~-----~~~~~~-~~--~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r 185 (263)
T 2a14_A 114 ACELEGNSGR-----WEEKEE-KL--RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLAS 185 (263)
T ss_dssp HHHHTTCGGG-----HHHHHH-HH--HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHT
T ss_pred HHhcCCCCcc-----hhhHHH-HH--HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHH
Confidence 0000000000 000000 00 01233 677777763 21 24799999999988764 567789999999
Q ss_pred hccCCeEEEEecccc---ccccCCCCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 250 ILKPGGIWINLGPLL---YHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 250 ~LkpGG~~In~gPl~---y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
+|||||++|..+++. |.... .......++.+++.++++++||+++..
T Consensus 186 ~LKPGG~li~~~~~~~~~~~~g~-~~~~~~~~~~~~l~~~l~~aGF~i~~~ 235 (263)
T 2a14_A 186 LLKPGGHLVTTVTLRLPSYMVGK-REFSCVALEKGEVEQAVLDAGFDIEQL 235 (263)
T ss_dssp TEEEEEEEEEEEESSCCEEEETT-EEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred HcCCCcEEEEEEeecCccceeCC-eEeeccccCHHHHHHHHHHCCCEEEEE
Confidence 999999999765432 11110 001224579999999999999998753
No 35
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.75 E-value=2.6e-17 Score=145.60 Aligned_cols=138 Identities=16% Similarity=0.209 Sum_probs=107.5
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..|++.+. .|+|+|+|+.|+..++......
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------------- 125 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEE--------------------------------- 125 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGG---------------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhc---------------------------------
Confidence 467999999999999999999865 7999999999999887632210
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcch--HHHHHHHHHHhccCCeEEEEecccccc---ccCCCC
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANN--IVSFIETIFNILKPGGIWINLGPLLYH---YSNMLN 272 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n--~~~yl~~I~~~LkpGG~~In~gPl~y~---~~~~~~ 272 (298)
. ..++.+..+|+.++...+++||+|++.+.+++.++ +..+++++.++|||||+++...|.... +. ..
T Consensus 126 -----~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~--~~ 197 (241)
T 2ex4_A 126 -----G-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILD--DV 197 (241)
T ss_dssp -----G-GGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEE--TT
T ss_pred -----C-CceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceec--cc
Confidence 0 02577889998888766779999999988887776 568999999999999999865543221 11 01
Q ss_pred CCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 273 EDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 273 ~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
......+.+++.++++++||+++..
T Consensus 198 ~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 198 DSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp TTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred CCcccCCHHHHHHHHHHcCCeEEEe
Confidence 1233458999999999999998764
No 36
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.74 E-value=4.3e-17 Score=150.21 Aligned_cols=151 Identities=12% Similarity=0.025 Sum_probs=114.0
Q ss_pred HHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccc
Q psy3185 105 SEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNI 183 (298)
Q Consensus 105 ~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~ 183 (298)
+.+.+.++. ..++.+|||+|||+|.++..++++ |..|+|+|+|+.|+..++......
T Consensus 106 ~~l~~~l~~---~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------- 163 (312)
T 3vc1_A 106 EFLMDHLGQ---AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRAREL------------------- 163 (312)
T ss_dssp HHHHTTSCC---CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT-------------------
T ss_pred HHHHHHhcc---CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc-------------------
Confidence 445555541 134679999999999999999998 999999999999999988743210
Q ss_pred cccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccc
Q psy3185 184 LTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPL 263 (298)
Q Consensus 184 ~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl 263 (298)
.+ ..++.+..+|+.+++..+++||+|++...+++. +...+++++.++|||||+++...|.
T Consensus 164 -----------------~~--~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 164 -----------------RI--DDHVRSRVCNMLDTPFDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp -----------------TC--TTTEEEEECCTTSCCCCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -----------------CC--CCceEEEECChhcCCCCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 01 137889999999887677999999999888877 5899999999999999999865543
Q ss_pred cccccCCCC---------CCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 264 LYHYSNMLN---------EDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 264 ~y~~~~~~~---------~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
......... ...-.++.+++.++++++||+++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 224 WNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp ECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred ccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 211100000 0112468999999999999998753
No 37
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.74 E-value=3.6e-17 Score=143.66 Aligned_cols=100 Identities=18% Similarity=0.257 Sum_probs=84.8
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|+++..+++.|.+|+|+|+|+.|+..++......
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~---------------------------------- 82 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ---------------------------------- 82 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhc----------------------------------
Confidence 4679999999999999999999999999999999999888643210
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecc-cccCc---chHHHHHHHHHHhccCCeEEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCF-FIDCA---NNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~f-fidta---~n~~~yl~~I~~~LkpGG~~In 259 (298)
..++.+..+|+.++..+ ++||+|++.+ .+++. +++..++++++++|||||+++.
T Consensus 83 ------~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 83 ------GLKPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp ------TCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ------CCCeEEEecccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 01577888998887654 8999999988 77766 7889999999999999999974
No 38
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.74 E-value=3e-17 Score=142.86 Aligned_cols=144 Identities=13% Similarity=0.202 Sum_probs=104.9
Q ss_pred CCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|+++..+++++ ..|+|+|+|+.|+..++..+... .+++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------~~~~ 80 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRL----------------------------RLPR 80 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTC----------------------------CCCH
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHh----------------------------cCCc
Confidence 35799999999999999999987 58999999999999988743210 0000
Q ss_pred CCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcc--hHHHHHHHHHHhccCCeEEEEecccccc--ccCC--
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCAN--NIVSFIETIFNILKPGGIWINLGPLLYH--YSNM-- 270 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~--n~~~yl~~I~~~LkpGG~~In~gPl~y~--~~~~-- 270 (298)
. ...++.+..+|+.......++||+|++...+++.. ++..+++++.++|||||+++......|. +...
T Consensus 81 ~------~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~ 154 (217)
T 3jwh_A 81 N------QWERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPA 154 (217)
T ss_dssp H------HHTTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC----
T ss_pred c------cCcceEEEeCCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhccccc
Confidence 0 01268899999876655568999999998888666 4589999999999999987743221121 1000
Q ss_pred ----CCCCccCCCHHHHH----HHHHhCCCEEEE
Q psy3185 271 ----LNEDSIEPSYEVVK----QVIQGLGFVYEV 296 (298)
Q Consensus 271 ----~~~~~~~ls~eEl~----~~~~~~GF~i~~ 296 (298)
.......++.+|+. +++++.||+++.
T Consensus 155 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~ 188 (217)
T 3jwh_A 155 GKLRHKDHRFEWTRSQFQNWANKITERFAYNVQF 188 (217)
T ss_dssp -------CCSCBCHHHHHHHHHHHHHHSSEEEEE
T ss_pred ccccccccccccCHHHHHHHHHHHHHHcCceEEE
Confidence 01234568999999 899999999874
No 39
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.74 E-value=1.5e-17 Score=147.37 Aligned_cols=138 Identities=17% Similarity=0.113 Sum_probs=107.8
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|+++..+++.|+ .|+|+|+|+.|+..++.....
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------------------------- 138 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG---------------------------------- 138 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT----------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc----------------------------------
Confidence 467999999999999999999875 599999999999988763210
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCc--chHHHHHHHHHHhccCCeEEEEecccccc--ccCCCCC
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWINLGPLLYH--YSNMLNE 273 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~In~gPl~y~--~~~~~~~ 273 (298)
..++.+..+|+.++...+++||+|++.+.+++. +++..++++++++|||||+++...|..-. +......
T Consensus 139 -------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~ 211 (254)
T 1xtp_A 139 -------MPVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKED 211 (254)
T ss_dssp -------SSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTT
T ss_pred -------CCceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccC
Confidence 036788999998877667899999999888877 56889999999999999999865442110 0000112
Q ss_pred CccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 274 DSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 274 ~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
.....+.+++.++++++||+++..
T Consensus 212 ~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 212 SSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp TEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred CcccCCHHHHHHHHHHCCCEEEEe
Confidence 344578999999999999998753
No 40
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.74 E-value=3.7e-17 Score=146.79 Aligned_cols=151 Identities=12% Similarity=0.002 Sum_probs=114.0
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
.+..+...++. ..++.+|||+|||+|.++..+++.+. .|+|+|+|+.|+..++......
T Consensus 33 ~~~~~l~~l~~---~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------- 92 (267)
T 3kkz_A 33 VTLKALSFIDN---LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQS----------------- 92 (267)
T ss_dssp HHHHHHTTCCC---CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHhccc---CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHc-----------------
Confidence 44555555541 13568999999999999999999966 8999999999999988743210
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEec
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLG 261 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~g 261 (298)
.+ ..++.+..+|+.+++.++++||+|++...+++. +...++++++++|||||+++...
T Consensus 93 -------------------~~--~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 93 -------------------GL--QNRVTGIVGSMDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp -------------------TC--TTTEEEEECCTTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred -------------------CC--CcCcEEEEcChhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEE
Confidence 01 136889999999887677999999999888877 78999999999999999998655
Q ss_pred cccccccCCC--------CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 262 PLLYHYSNML--------NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 262 Pl~y~~~~~~--------~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
|. |...... .......+.+++.++++++||+++.
T Consensus 151 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (267)
T 3kkz_A 151 CS-WFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVA 192 (267)
T ss_dssp EE-ESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEE
T ss_pred ee-ecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEE
Confidence 43 1111000 0011235899999999999999875
No 41
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.74 E-value=1.2e-17 Score=152.11 Aligned_cols=176 Identities=14% Similarity=0.082 Sum_probs=107.2
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhcccccc---cccc-
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKI---YPWV- 176 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i---~p~~- 176 (298)
.++..|.+.++.. ..++.+|||+|||+|+++..++.. |..|+|+|+|+.|+..++..+.+... .+.. .+++
T Consensus 56 ~~~~~l~~~l~~~--~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~~~~~~~v~ 131 (289)
T 2g72_A 56 WKLRCLAQTFATG--EVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPG--AFNWSMYSQHAC 131 (289)
T ss_dssp HHHHHHHHHHHTS--CSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTT--CCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCC--CCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcc--cccchhhhhHHH
Confidence 3445555554321 124679999999999976655553 77999999999999988764332100 0000 0000
Q ss_pred --cccccc-ccccccccccccCCCCCCCCCCCCCeeEEeccccc-cc-----cCCCceeEEEecccccC----cchHHHH
Q psy3185 177 --QQTDNN-ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQ-VY-----VHPNKWDCVATCFFIDC----ANNIVSF 243 (298)
Q Consensus 177 --~~~s~~-~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~-~~-----~~~~~fD~V~t~ffidt----a~n~~~y 243 (298)
...+.. .....+++ .....+..+|+.+ .+ .++++||+|++.+.+++ .+++..+
T Consensus 132 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~ 197 (289)
T 2g72_A 132 LIEGKGECWQDKERQLR--------------ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRA 197 (289)
T ss_dssp HHHCSCCCHHHHHHHHH--------------HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHH
T ss_pred HhcCcccchhhhHHHHH--------------hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHH
Confidence 000000 00000000 0013456667665 32 13467999999998887 6789999
Q ss_pred HHHHHHhccCCeEEEEecccc---ccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 244 IETIFNILKPGGIWINLGPLL---YHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 244 l~~I~~~LkpGG~~In~gPl~---y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
+++++++|||||+++..+.+. |...+ ...+...++.+++.++++++||+++.
T Consensus 198 l~~~~r~LkpGG~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~aGf~~~~ 252 (289)
T 2g72_A 198 LDHITTLLRPGGHLLLIGALEESWYLAGE-ARLTVVPVSEEEVREALVRSGYKVRD 252 (289)
T ss_dssp HHHHHTTEEEEEEEEEEEEESCCEEEETT-EEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHhcCCCCEEEEEEecCcceEEcCC-eeeeeccCCHHHHHHHHHHcCCeEEE
Confidence 999999999999998654331 11110 00123457999999999999999875
No 42
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.73 E-value=1.3e-16 Score=144.51 Aligned_cols=150 Identities=13% Similarity=0.099 Sum_probs=111.2
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHH-HcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIA-RRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela-~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
.++.+.+.++. .++.+|||+|||+|.++..++ +.|.+|+|+|+|+.|+..++..+...
T Consensus 52 ~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~----------------- 110 (287)
T 1kpg_A 52 KIDLALGKLGL----QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANS----------------- 110 (287)
T ss_dssp HHHHHHTTTTC----CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTC-----------------
T ss_pred HHHHHHHHcCC----CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-----------------
Confidence 44555555542 346799999999999999999 56899999999999999888743210
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCc--chHHHHHHHHHHhccCCeEEEE
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~In 259 (298)
....++.+..+|+.+++ ++||+|++...+++. ++...++++++++|||||.++.
T Consensus 111 ---------------------~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 111 ---------------------ENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp ---------------------CCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred ---------------------CCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEE
Confidence 00136889999998764 899999999888877 7889999999999999999985
Q ss_pred ecccccccc-----CC----------------CCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 260 LGPLLYHYS-----NM----------------LNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 260 ~gPl~y~~~-----~~----------------~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
..|...... .. .......+|.+++.++++++||+++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 225 (287)
T 1kpg_A 167 HTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRV 225 (287)
T ss_dssp EEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEE
T ss_pred EEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEE
Confidence 433211000 00 001123358999999999999998763
No 43
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.73 E-value=6.1e-17 Score=148.00 Aligned_cols=116 Identities=21% Similarity=0.260 Sum_probs=88.2
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
+....+.+.++. .+.+|||+|||+|+++..|+++|+.|+|+|+|+.|+..++.......
T Consensus 70 ~~~~~~~~~~~~-----~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~---------------- 128 (299)
T 3g2m_A 70 SEAREFATRTGP-----VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAP---------------- 128 (299)
T ss_dssp HHHHHHHHHHCC-----CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSC----------------
T ss_pred HHHHHHHHhhCC-----CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcc----------------
Confidence 445555555542 24599999999999999999999999999999999999887432100
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEec-ccccCcc--hHHHHHHHHHHhccCCeEEE
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC-FFIDCAN--NIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~-ffidta~--n~~~yl~~I~~~LkpGG~~I 258 (298)
+....++.+..+|+.++.. +++||+|++. ..++... ++..++++++++|||||+++
T Consensus 129 --------------------~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~ 187 (299)
T 3g2m_A 129 --------------------ADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFL 187 (299)
T ss_dssp --------------------HHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------cccccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 0000368899999999765 7899988754 4455443 57899999999999999997
Q ss_pred E
Q psy3185 259 N 259 (298)
Q Consensus 259 n 259 (298)
.
T Consensus 188 ~ 188 (299)
T 3g2m_A 188 L 188 (299)
T ss_dssp E
T ss_pred E
Confidence 4
No 44
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.73 E-value=5.7e-17 Score=141.10 Aligned_cols=143 Identities=15% Similarity=0.252 Sum_probs=104.9
Q ss_pred CCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
+.+|||+|||+|.++..+++++ ..|+|+|+|+.|+..++..+.... +++.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----------------------------~~~~ 81 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDR----------------------------LPEM 81 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGG----------------------------SCHH
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhc----------------------------cccc
Confidence 5799999999999999999987 689999999999999887432100 0000
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcch--HHHHHHHHHHhccCCeEEEEecccccc--ccCCC--
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANN--IVSFIETIFNILKPGGIWINLGPLLYH--YSNML-- 271 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n--~~~yl~~I~~~LkpGG~~In~gPl~y~--~~~~~-- 271 (298)
...++.+..+|+.......++||+|++...+++..+ +..+++++.++|||||++|......|. +...+
T Consensus 82 ------~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~ 155 (219)
T 3jwg_A 82 ------QRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEG 155 (219)
T ss_dssp ------HHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT---
T ss_pred ------cCcceEEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcc
Confidence 002688999998766656689999999988887774 479999999999999977743211111 10000
Q ss_pred ----CCCccCCCHHHHH----HHHHhCCCEEEE
Q psy3185 272 ----NEDSIEPSYEVVK----QVIQGLGFVYEV 296 (298)
Q Consensus 272 ----~~~~~~ls~eEl~----~~~~~~GF~i~~ 296 (298)
......++.+++. +++++.||++..
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~ 188 (219)
T 3jwg_A 156 NLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRF 188 (219)
T ss_dssp --GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEE
T ss_pred cccccCceeeecHHHHHHHHHHHHHHCCcEEEE
Confidence 1234457999999 888899999864
No 45
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.73 E-value=5.3e-17 Score=144.37 Aligned_cols=155 Identities=17% Similarity=0.230 Sum_probs=114.7
Q ss_pred hhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 99 CYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 99 ~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
.+..+++.+...... ..++.+|||+|||+|.++..+++.|..|+|+|+|+.|+..++....
T Consensus 22 ~~~~~~~~l~~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~---------------- 82 (263)
T 2yqz_A 22 VAGQIATAMASAVHP---KGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIA---------------- 82 (263)
T ss_dssp HHHHHHHHHHHHCCC---SSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTT----------------
T ss_pred HHHHHHHHHHHhhcC---CCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----------------
Confidence 455677776542211 1246799999999999999999999999999999999998876320
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
....++.+..+|+.+++..+++||+|++.+.+++.++...++++++++|||||.++
T Consensus 83 ------------------------~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 138 (263)
T 2yqz_A 83 ------------------------GVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALL 138 (263)
T ss_dssp ------------------------TSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEE
T ss_pred ------------------------ccCCceEEEEcccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEE
Confidence 00137889999998887667899999999999999899999999999999999987
Q ss_pred Ee-c-----c---cc--c----cccCCC-CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 259 NL-G-----P---LL--Y----HYSNML-NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 259 n~-g-----P---l~--y----~~~~~~-~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.. + + +. + .....+ ......++.+++.++++++||+++.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 192 (263)
T 2yqz_A 139 EGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRT 192 (263)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEE
T ss_pred EEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcce
Confidence 53 1 1 00 0 000000 0012236789999999999998654
No 46
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.73 E-value=9.5e-17 Score=141.10 Aligned_cols=113 Identities=17% Similarity=0.239 Sum_probs=90.8
Q ss_pred hhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 99 CYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 99 ~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
.|..+.+.+.+.++. +.+|||+|||+|.++..+++. ..|+|+|+|+.|+..++......
T Consensus 19 ~~~~~~~~~~~~~~~------~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~-------------- 77 (243)
T 3d2l_A 19 PYPEWVAWVLEQVEP------GKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMET-------------- 77 (243)
T ss_dssp CHHHHHHHHHHHSCT------TCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHT--------------
T ss_pred cHHHHHHHHHHHcCC------CCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhc--------------
Confidence 355677888887762 479999999999999999999 89999999999999888643210
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecc-cccCc---chHHHHHHHHHHhccCC
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCF-FIDCA---NNIVSFIETIFNILKPG 254 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~f-fidta---~n~~~yl~~I~~~LkpG 254 (298)
..++.+..+|+.++.. +++||+|++.+ .+++. +++..++++++++||||
T Consensus 78 --------------------------~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg 130 (243)
T 3d2l_A 78 --------------------------NRHVDFWVQDMRELEL-PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDG 130 (243)
T ss_dssp --------------------------TCCCEEEECCGGGCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEE
T ss_pred --------------------------CCceEEEEcChhhcCC-CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCC
Confidence 0257788899888754 38999998765 55544 67889999999999999
Q ss_pred eEEEE
Q psy3185 255 GIWIN 259 (298)
Q Consensus 255 G~~In 259 (298)
|+++.
T Consensus 131 G~l~~ 135 (243)
T 3d2l_A 131 GKLLF 135 (243)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 99974
No 47
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.73 E-value=1.7e-16 Score=145.22 Aligned_cols=149 Identities=10% Similarity=0.070 Sum_probs=111.4
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
.++.+.+.++. .++.+|||+|||+|.++..+++. |..|+|+|+|+.|+..++......
T Consensus 60 ~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------- 118 (302)
T 3hem_A 60 KRKLALDKLNL----EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEV----------------- 118 (302)
T ss_dssp HHHHHHHTTCC----CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHS-----------------
T ss_pred HHHHHHHHcCC----CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-----------------
Confidence 34445555442 35679999999999999999998 999999999999999988743210
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCc---------chHHHHHHHHHHhcc
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA---------NNIVSFIETIFNILK 252 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta---------~n~~~yl~~I~~~Lk 252 (298)
+-..++.+..+|+.++ +++||+|++...+++. ++...+++++.++||
T Consensus 119 ---------------------~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lk 174 (302)
T 3hem_A 119 ---------------------DSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTP 174 (302)
T ss_dssp ---------------------CCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSC
T ss_pred ---------------------CCCCceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcC
Confidence 0013788999999887 6899999999888776 556899999999999
Q ss_pred CCeEEEEecccccccc-----CC----------------CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 253 PGGIWINLGPLLYHYS-----NM----------------LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 253 pGG~~In~gPl~y~~~-----~~----------------~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
|||+++...+...... .. ........+.+++.+++++.||+++.
T Consensus 175 pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~ 239 (302)
T 3hem_A 175 DDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVER 239 (302)
T ss_dssp TTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEE
T ss_pred CCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEE
Confidence 9999985433211000 00 00123457899999999999999875
No 48
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.72 E-value=7.4e-18 Score=152.52 Aligned_cols=105 Identities=11% Similarity=0.086 Sum_probs=90.4
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+++.|.++.| .+.+|||+|||+|.++..|++.|.+|+|+|+|+.|+..|+.
T Consensus 29 l~~~l~~~~~------~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~----------------------- 79 (257)
T 4hg2_A 29 LFRWLGEVAP------ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR----------------------- 79 (257)
T ss_dssp HHHHHHHHSS------CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC-----------------------
T ss_pred HHHHHHHhcC------CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh-----------------------
Confidence 6778887776 25699999999999999999999999999999999864321
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
..++.+..+|+.+++.++++||+|+++..+++. +...++++++|+|||||+++.
T Consensus 80 ----------------------~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 80 ----------------------HPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp ----------------------CTTEEEEECCTTCCCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEE
T ss_pred ----------------------cCCceeehhhhhhhcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEE
Confidence 137889999999998888999999999888876 477899999999999999864
No 49
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.72 E-value=7.8e-17 Score=141.31 Aligned_cols=108 Identities=20% Similarity=0.247 Sum_probs=86.8
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
.+.+.+..+.+ ++.+|||+|||+|.++..+++.|.+|+|+|+|+.|+..++..+
T Consensus 29 ~~~~~l~~~~~------~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~-------------------- 82 (239)
T 3bxo_A 29 DIADLVRSRTP------EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL-------------------- 82 (239)
T ss_dssp HHHHHHHHHCT------TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC--------------------
T ss_pred HHHHHHHHhcC------CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC--------------------
Confidence 35566666553 3579999999999999999999989999999999999887510
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecc-cccCc---chHHHHHHHHHHhccCCeEE
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCF-FIDCA---NNIVSFIETIFNILKPGGIW 257 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~f-fidta---~n~~~yl~~I~~~LkpGG~~ 257 (298)
.++.+..+|+.++.. +++||+|++.+ .+++. +++..++++++++|||||.+
T Consensus 83 ------------------------~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l 137 (239)
T 3bxo_A 83 ------------------------PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVV 137 (239)
T ss_dssp ------------------------TTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEE
T ss_pred ------------------------CCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEE
Confidence 146678888888754 68999999654 55444 67889999999999999999
Q ss_pred EEe
Q psy3185 258 INL 260 (298)
Q Consensus 258 In~ 260 (298)
+..
T Consensus 138 ~~~ 140 (239)
T 3bxo_A 138 VVE 140 (239)
T ss_dssp EEC
T ss_pred EEE
Confidence 853
No 50
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.72 E-value=1.8e-16 Score=137.96 Aligned_cols=130 Identities=16% Similarity=0.214 Sum_probs=101.8
Q ss_pred hhccCChHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhh
Q psy3185 87 DWSEEGSEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCRE 166 (298)
Q Consensus 87 dWs~~g~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~ 166 (298)
+|+.....+.......+.+.+.+.++ ++.+|||+|||+|.++..+++.|.+|+|+|+|+.|+..++......
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~-- 83 (227)
T 1ve3_A 12 TYTDINSQEYRSRIETLEPLLMKYMK------KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSR-- 83 (227)
T ss_dssp TTTCTTSHHHHHHHHHHHHHHHHSCC------SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--
T ss_pred hhhcccHHHHHHHHHHHHHHHHHhcC------CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--
Confidence 34444444444556677788877765 2579999999999999999999999999999999999887643210
Q ss_pred ccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEeccc--ccCcchHHHHH
Q psy3185 167 KNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFF--IDCANNIVSFI 244 (298)
Q Consensus 167 ~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ff--idta~n~~~yl 244 (298)
..++.+..+|+.++...+++||+|++... +.+.++...++
T Consensus 84 --------------------------------------~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l 125 (227)
T 1ve3_A 84 --------------------------------------ESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVF 125 (227)
T ss_dssp --------------------------------------TCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHH
T ss_pred --------------------------------------CCCceEEECchhcCCCCCCcEEEEEEcCchHhCCHHHHHHHH
Confidence 03677899999887656789999998876 66777889999
Q ss_pred HHHHHhccCCeEEEEecc
Q psy3185 245 ETIFNILKPGGIWINLGP 262 (298)
Q Consensus 245 ~~I~~~LkpGG~~In~gP 262 (298)
+.++++|||||.++...|
T Consensus 126 ~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 126 KEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEEec
Confidence 999999999999975433
No 51
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.72 E-value=3.4e-17 Score=136.89 Aligned_cols=129 Identities=15% Similarity=-0.011 Sum_probs=102.4
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+++.+..|+|+|+|+.|+..++...
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~------------------------------------- 59 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKF------------------------------------- 59 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHC-------------------------------------
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhC-------------------------------------
Confidence 4679999999999999999999889999999999999877520
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCC
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEP 278 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~l 278 (298)
.++.+..+| ....+++||+|++...+++.++...+++++.++|||||+++...+...... ........+
T Consensus 60 -------~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-~~~~~~~~~ 128 (170)
T 3i9f_A 60 -------DSVITLSDP---KEIPDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTG-IGPPLSIRM 128 (170)
T ss_dssp -------TTSEEESSG---GGSCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCS-SSSCGGGCC
T ss_pred -------CCcEEEeCC---CCCCCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccc-cCchHhhhc
Confidence 256677777 334578999999999999999999999999999999999986543211111 111234558
Q ss_pred CHHHHHHHHHhCCCEEEEe
Q psy3185 279 SYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 279 s~eEl~~~~~~~GF~i~~~ 297 (298)
+.+++.++++ ||++++.
T Consensus 129 ~~~~~~~~l~--Gf~~~~~ 145 (170)
T 3i9f_A 129 DEKDYMGWFS--NFVVEKR 145 (170)
T ss_dssp CHHHHHHHTT--TEEEEEE
T ss_pred CHHHHHHHHh--CcEEEEc
Confidence 9999999998 9998763
No 52
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.72 E-value=9.3e-17 Score=144.52 Aligned_cols=140 Identities=14% Similarity=0.178 Sum_probs=109.2
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++..+...
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------------------------- 84 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN-------------------------------- 84 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 5779999999999999999998 678999999999999888743210
Q ss_pred CCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccc----cccccCC--
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPL----LYHYSNM-- 270 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl----~y~~~~~-- 270 (298)
. ..++.+..+|+.++..++++||+|++...+++.++...+++++.++|||||+++...|- .++....
T Consensus 85 ----~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~ 157 (276)
T 3mgg_A 85 ----G---IKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKA 157 (276)
T ss_dssp ----T---CCSEEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHH
T ss_pred ----C---CCCcEEEEcccccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHH
Confidence 0 02688999999988777899999999999999999999999999999999999864321 1110000
Q ss_pred -----------CCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 271 -----------LNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 271 -----------~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
.......++.+++.++++++||+++..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~ 195 (276)
T 3mgg_A 158 IEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRV 195 (276)
T ss_dssp HHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEE
Confidence 001123356789999999999998753
No 53
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.72 E-value=6.5e-17 Score=140.37 Aligned_cols=144 Identities=15% Similarity=0.137 Sum_probs=107.4
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+...+.+.++ .++.+|||+|||+|.++..+++.|..|+|+|+|+.|+..++..
T Consensus 21 ~~~~l~~~~~-----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~---------------------- 73 (230)
T 3cc8_A 21 VNPNLLKHIK-----KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEK---------------------- 73 (230)
T ss_dssp CCHHHHTTCC-----TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTT----------------------
T ss_pred HHHHHHHHhc-----cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHh----------------------
Confidence 4455566554 2467999999999999999999999999999999999876531
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccc--cccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQ--VYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~--~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~ 260 (298)
...+..+|+.+ ....+++||+|++...+++.++...+++++.++|||||+++..
T Consensus 74 ------------------------~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 74 ------------------------LDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp ------------------------SSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEE
T ss_pred ------------------------CCcEEEcchhhcCCCCCCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 01245556554 2234689999999999988889999999999999999999865
Q ss_pred cccc-------------ccccCC---CCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 261 GPLL-------------YHYSNM---LNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 261 gPl~-------------y~~~~~---~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
.|.. |.+... .......++.+++.++++++||+++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 182 (230)
T 3cc8_A 130 IPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKV 182 (230)
T ss_dssp EECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred eCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEE
Confidence 5431 111100 011224479999999999999998753
No 54
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.71 E-value=1.9e-16 Score=138.23 Aligned_cols=141 Identities=17% Similarity=0.112 Sum_probs=108.2
Q ss_pred hhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 99 CYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 99 ~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
.|...++.+....| +.+|||+|||+|.++..+++. +|+|+|+.|+..++..
T Consensus 34 ~~~~~~~~l~~~~~-------~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~------------------ 84 (219)
T 1vlm_A 34 AYLSELQAVKCLLP-------EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR------------------ 84 (219)
T ss_dssp HHHHHHHHHHHHCC-------SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT------------------
T ss_pred hHHHHHHHHHHhCC-------CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc------------------
Confidence 34456667776655 469999999999999999887 9999999999887641
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
++.+..+|+.++...+++||+|++...+++.++...+++++.++|||||.++
T Consensus 85 ----------------------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 136 (219)
T 1vlm_A 85 ----------------------------GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLI 136 (219)
T ss_dssp ----------------------------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------------------CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEE
Confidence 3446777777766567899999999999888899999999999999999998
Q ss_pred Eecccccc-------cc-C-C-CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 259 NLGPLLYH-------YS-N-M-LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 259 n~gPl~y~-------~~-~-~-~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
...|.... .. . . .......++.+++.++++++||+++.
T Consensus 137 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 137 VGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp EEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred EEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEE
Confidence 65432110 00 0 0 01123447999999999999999875
No 55
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.71 E-value=2.9e-16 Score=144.53 Aligned_cols=149 Identities=15% Similarity=0.136 Sum_probs=111.7
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
.++.+.+.++. .++.+|||+|||+|.++..+++. |..|+|+|+|+.|+..++......
T Consensus 78 ~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------- 136 (318)
T 2fk8_A 78 KVDLNLDKLDL----KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASI----------------- 136 (318)
T ss_dssp HHHHHHTTSCC----CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTS-----------------
T ss_pred HHHHHHHhcCC----CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----------------
Confidence 45555555542 34679999999999999999988 999999999999999988743210
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCc--chHHHHHHHHHHhccCCeEEEE
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~In 259 (298)
....++.+..+|+.+++ ++||+|++...+++. +++..+++++.++|||||.++.
T Consensus 137 ---------------------~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 137 ---------------------DTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp ---------------------CCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred ---------------------CCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 00136888999998763 789999999888877 7899999999999999999985
Q ss_pred eccccccccC---------------------CCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 260 LGPLLYHYSN---------------------MLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 260 ~gPl~y~~~~---------------------~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
..|....... .........+.+++.++++++||+++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~ 250 (318)
T 2fk8_A 193 QSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPE 250 (318)
T ss_dssp EEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCC
T ss_pred EEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEE
Confidence 4432111000 000112346899999999999999764
No 56
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.70 E-value=7.8e-17 Score=138.69 Aligned_cols=151 Identities=18% Similarity=0.153 Sum_probs=108.2
Q ss_pred hHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHH-HHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 100 YEPIISEILARFPPETINPKDVNILVPGAGLGRL-AFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 100 ~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grl-a~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
+..+++.+... + ++.+|||+|||+|.+ ...++..|++|+|+|+|+.|+..++......
T Consensus 11 ~~~~~~~~~~~-~------~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------- 69 (209)
T 2p8j_A 11 LYRFLKYCNES-N------LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN-------------- 69 (209)
T ss_dssp HHHHHHHHHHS-S------SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH--------------
T ss_pred HHHHHHHHhcc-C------CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--------------
Confidence 34456655543 2 357999999999998 5566778999999999999999887643210
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCc--chHHHHHHHHHHhccCCeE
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGI 256 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~ 256 (298)
..++.+..+|+.+++.++++||+|++...+++. +++..++++++++|||||+
T Consensus 70 --------------------------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 123 (209)
T 2p8j_A 70 --------------------------NFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGL 123 (209)
T ss_dssp --------------------------TCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred --------------------------CCceEEEECchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcE
Confidence 024667888888876667899999987766665 7889999999999999999
Q ss_pred EEEeccc----cccc---------cCCC-CCCc--cCCCHHHHHHHHHhCCCEEEEe
Q psy3185 257 WINLGPL----LYHY---------SNML-NEDS--IEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 257 ~In~gPl----~y~~---------~~~~-~~~~--~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
++...+- .|.. .... ..+. ..++.+|+.+++...||....+
T Consensus 124 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~ 180 (209)
T 2p8j_A 124 ACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKED 180 (209)
T ss_dssp EEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEE
T ss_pred EEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeee
Confidence 9743211 1110 0000 0111 3479999999999999987653
No 57
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.70 E-value=1.1e-17 Score=150.31 Aligned_cols=144 Identities=17% Similarity=0.161 Sum_probs=109.0
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
.+.+.+.+.++. .++.+|||+|||+|.++..+++.|.+|+|+|+|+.|+..++.
T Consensus 21 ~~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~---------------------- 74 (261)
T 3ege_A 21 RIVNAIINLLNL----PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVV---------------------- 74 (261)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCC----------------------
T ss_pred HHHHHHHHHhCC----CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHh----------------------
Confidence 466667666653 246899999999999999999999999999999999875431
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEec
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLG 261 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~g 261 (298)
..++.+..+|+.+++.++++||+|++.+.+++.++...++++++++|| ||.++...
T Consensus 75 -----------------------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 75 -----------------------HPQVEWFTGYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp -----------------------CTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred -----------------------ccCCEEEECchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEE
Confidence 026788999998887677999999999999988999999999999999 99665432
Q ss_pred cc------cccccCCC----CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 262 PL------LYHYSNML----NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 262 Pl------~y~~~~~~----~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
+- .|.....+ .......+.+++. +++++||+.+.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~ 174 (261)
T 3ege_A 131 FDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVE 174 (261)
T ss_dssp ECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEE
T ss_pred cCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCcee
Confidence 21 11100000 0012235678899 99999997765
No 58
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.70 E-value=2.9e-16 Score=142.44 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=85.5
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|.++..|++.|..|+|+|+|+.|+..++.........
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-------------------------------- 105 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKE-------------------------------- 105 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTS--------------------------------
T ss_pred CCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccc--------------------------------
Confidence 579999999999999999999999999999999999887632110000
Q ss_pred CCCCCCCCeeEEeccccccc---cCCCceeEEEec-ccccCcch-------HHHHHHHHHHhccCCeEEEE
Q psy3185 200 SDYNDDCDFSMAAGDFLQVY---VHPNKWDCVATC-FFIDCANN-------IVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~---~~~~~fD~V~t~-ffidta~n-------~~~yl~~I~~~LkpGG~~In 259 (298)
+...++.+..+|+.++. ..+++||+|++. ..+++..+ ...++++++++|||||+++.
T Consensus 106 ---~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 106 ---PAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp ---HHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ---cccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 00135778889988876 567899999997 77777777 99999999999999999984
No 59
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=2.9e-16 Score=132.62 Aligned_cols=124 Identities=14% Similarity=0.158 Sum_probs=99.8
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+++.|.+|+|+|+|+.|+..++...
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~------------------------------------- 88 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF------------------------------------- 88 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------------------------------------
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC-------------------------------------
Confidence 3679999999999999999999999999999999998877521
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEec-ccccCc--chHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCc
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC-FFIDCA--NNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDS 275 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~-ffidta--~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~ 275 (298)
.++.+..+|+.++..++++||+|++. .+++.. ++...+++.+.++|||||+++...|. .
T Consensus 89 -------~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~-----------~ 150 (195)
T 3cgg_A 89 -------PEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGA-----------G 150 (195)
T ss_dssp -------TTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET-----------T
T ss_pred -------CCCcEEEcccccCCCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC-----------C
Confidence 13567788887765556899999986 445433 56789999999999999999853221 1
Q ss_pred cCCCHHHHHHHHHhCCCEEEEe
Q psy3185 276 IEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 276 ~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
..++.+++.+++++.||+++..
T Consensus 151 ~~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 151 RGWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp SSCCHHHHHHHHHHHTEEEEEE
T ss_pred CCcCHHHHHHHHHHcCCEEeee
Confidence 2367999999999999998753
No 60
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.70 E-value=3.8e-16 Score=141.95 Aligned_cols=151 Identities=17% Similarity=0.167 Sum_probs=113.2
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
+++.+.+.+... .++.+|||+|||+|.++..+++. |..|+|+|+|+.|+..++.....
T Consensus 9 ~~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~---------------- 69 (284)
T 3gu3_A 9 YVSFLVNTVWKI---TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL---------------- 69 (284)
T ss_dssp HHHHHHHTTSCC---CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS----------------
T ss_pred HHHHHHHHHhcc---CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh----------------
Confidence 445555544321 35689999999999999999998 68999999999999988763221
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.+ .++.+..+|+.+++. +++||+|++...+++.++...++++++++|||||+++.
T Consensus 70 ----------------------~~--~~v~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 124 (284)
T 3gu3_A 70 ----------------------LP--YDSEFLEGDATEIEL-NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIIC 124 (284)
T ss_dssp ----------------------SS--SEEEEEESCTTTCCC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEE
T ss_pred ----------------------cC--CceEEEEcchhhcCc-CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEE
Confidence 01 278899999998765 57999999999999999999999999999999999986
Q ss_pred eccc------cccccCCC-------------------CCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 260 LGPL------LYHYSNML-------------------NEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 260 ~gPl------~y~~~~~~-------------------~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
..|- .+...+.. .......+.+++.++++++||+.+..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~v~~ 187 (284)
T 3gu3_A 125 FEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIYLSELGVKNIEC 187 (284)
T ss_dssp EECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHHHHHTTCEEEEE
T ss_pred EecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHHHHHcCCCeEEE
Confidence 6554 11111000 00112345678999999999998753
No 61
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.70 E-value=5.3e-17 Score=155.31 Aligned_cols=153 Identities=16% Similarity=0.076 Sum_probs=111.7
Q ss_pred hHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 100 YEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 100 ~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
...+.+.+.+.++. .++.+|||+|||+|.++..++++|+.|+|+|+|+.|+..++.. . . +
T Consensus 92 ~~~~~~~l~~~~~~----~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~---~--~------~----- 151 (416)
T 4e2x_A 92 FAMLARDFLATELT----GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK---G--I------R----- 151 (416)
T ss_dssp HHHHHHHHHHTTTC----SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT---T--C------C-----
T ss_pred HHHHHHHHHHHhCC----CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc---C--C------C-----
Confidence 34466666666653 2467999999999999999999999999999999999887641 0 0 0
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
. ....+..++...++..+++||+|++...+++.+++..++++++++|||||+++.
T Consensus 152 ----------------~---------~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i 206 (416)
T 4e2x_A 152 ----------------V---------RTDFFEKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVF 206 (416)
T ss_dssp ----------------E---------ECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEE
T ss_pred ----------------c---------ceeeechhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEE
Confidence 0 001122344444444568999999999999999999999999999999999986
Q ss_pred eccccc------cccCCCCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 260 LGPLLY------HYSNMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 260 ~gPl~y------~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
..|..- .+.....++...+|.+++..+++++||+++..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 207 EDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp EEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEE
T ss_pred EeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEE
Confidence 544210 01111112344589999999999999998753
No 62
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.69 E-value=2.6e-16 Score=142.66 Aligned_cols=134 Identities=14% Similarity=0.115 Sum_probs=103.4
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|+++..++++|++|+|+|+|+.|+..++......
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~----------------------------------- 165 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKE----------------------------------- 165 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----------------------------------
T ss_pred CCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHc-----------------------------------
Confidence 579999999999999999999999999999999999888743210
Q ss_pred CCCCCCCCeeEEeccccccccCCCceeEEEecccccCc--chHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccC
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIE 277 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ 277 (298)
..++.+..+|+.+... +++||+|++...+++. +++..+++.+.++|||||+++.+.+..-.....+......
T Consensus 166 -----~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 239 (286)
T 3m70_A 166 -----NLNISTALYDINAANI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFT 239 (286)
T ss_dssp -----TCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCC
T ss_pred -----CCceEEEEeccccccc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCcccc
Confidence 0267889999988765 7899999998877744 6678999999999999999765433211111111234567
Q ss_pred CCHHHHHHHHHhCCCEEEE
Q psy3185 278 PSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 278 ls~eEl~~~~~~~GF~i~~ 296 (298)
++.+++.+++.. |+++.
T Consensus 240 ~~~~~l~~~~~~--~~~~~ 256 (286)
T 3m70_A 240 FAENELKEYYKD--WEFLE 256 (286)
T ss_dssp BCTTHHHHHTTT--SEEEE
T ss_pred CCHHHHHHHhcC--CEEEE
Confidence 889999999855 88764
No 63
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.69 E-value=1.7e-16 Score=150.85 Aligned_cols=146 Identities=15% Similarity=0.099 Sum_probs=107.5
Q ss_pred CCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..|++. +..|+|+|+|+.|+..++..+...... +.
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~--------------------------~~ 136 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEK--------------------------FF 136 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHH--------------------------HH
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhh--------------------------cc
Confidence 5679999999999999999986 569999999999999988743221000 00
Q ss_pred CCCCCCCCCCCCeeEEecccccc------ccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccc--
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQV------YVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHY-- 267 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~------~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~-- 267 (298)
. . ....++.+..+|+.++ ..++++||+|++...+++.++...++++++++|||||+++...+..-..
T Consensus 137 g----~-~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~ 211 (383)
T 4fsd_A 137 G----S-PSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLS 211 (383)
T ss_dssp S----S-TTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCC
T ss_pred c----c-cCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccC
Confidence 0 0 0013788999999887 5567899999999999988999999999999999999988543211000
Q ss_pred ---cCC----CCCCccCCCHHHHHHHHHhCCCEEE
Q psy3185 268 ---SNM----LNEDSIEPSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 268 ---~~~----~~~~~~~ls~eEl~~~~~~~GF~i~ 295 (298)
... .....-.++.+++.++++++||+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v 246 (383)
T 4fsd_A 212 EAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDV 246 (383)
T ss_dssp HHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCE
T ss_pred HhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceE
Confidence 000 0012334788999999999999765
No 64
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.69 E-value=2.4e-16 Score=143.82 Aligned_cols=185 Identities=15% Similarity=0.238 Sum_probs=117.8
Q ss_pred CcchHHHHHHHHHHHhhhccCChHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHH----HHHc--CCeE
Q psy3185 71 STDLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFE----IARR--GYVC 144 (298)
Q Consensus 71 ~~~~~~v~~~l~~~~RdWs~~g~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~e----la~~--G~~v 144 (298)
..|.++..+.+..+... +. ....+...+...+..+...++. ..++.+|||+|||+|.++.. ++.+ +..|
T Consensus 9 ~~d~~~y~~~~~~~~~~-~~-~~~~~~~~~~~~l~~~l~~~~~---~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v 83 (292)
T 2aot_A 9 FSDHGKYVESFRRFLNH-ST-EHQCMQEFMDKKLPGIIGRIGD---TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCI 83 (292)
T ss_dssp GGCHHHHHHHHHHHHTT-BS-HHHHHHHHHHHTHHHHSSSTTT---TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEE
T ss_pred cccHHHHHHHHHHHHHh-cc-HHHHHHHHHHHhchhHHhhccC---CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCcee
Confidence 36788888888877654 21 1223333333333333222221 13467999999999976653 3333 3433
Q ss_pred --EEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccc---
Q psy3185 145 --QGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVY--- 219 (298)
Q Consensus 145 --~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~--- 219 (298)
+|+|+|+.|+..++....... . .....+.+..++..++.
T Consensus 84 ~~~~vD~S~~ml~~a~~~~~~~~------------------------------~------~~~v~~~~~~~~~~~~~~~~ 127 (292)
T 2aot_A 84 NNEVVEPSAEQIAKYKELVAKTS------------------------------N------LENVKFAWHKETSSEYQSRM 127 (292)
T ss_dssp EEEEECSCHHHHHHHHHHHHTCS------------------------------S------CTTEEEEEECSCHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHhcc------------------------------C------CCcceEEEEecchhhhhhhh
Confidence 999999999998876432100 0 00113445566665543
Q ss_pred ---cCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEecc-----c--cccc--cCCCC-CCccCCCHHHHHHH
Q psy3185 220 ---VHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGP-----L--LYHY--SNMLN-EDSIEPSYEVVKQV 286 (298)
Q Consensus 220 ---~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gP-----l--~y~~--~~~~~-~~~~~ls~eEl~~~ 286 (298)
.++++||+|++.+.+++.+|+...+++|+++|||||.++...+ . +|.. ...+. .....++.+++.++
T Consensus 128 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQM 207 (292)
T ss_dssp HTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHH
T ss_pred ccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHH
Confidence 2468999999999999999999999999999999999985321 1 1111 10111 12334789999999
Q ss_pred HHhCCCEEEE
Q psy3185 287 IQGLGFVYEV 296 (298)
Q Consensus 287 ~~~~GF~i~~ 296 (298)
++++||+++.
T Consensus 208 l~~aGf~~~~ 217 (292)
T 2aot_A 208 LDNLGLKYEC 217 (292)
T ss_dssp HHHHTCCEEE
T ss_pred HHHCCCceEE
Confidence 9999998875
No 65
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.68 E-value=3.2e-16 Score=144.86 Aligned_cols=146 Identities=13% Similarity=0.052 Sum_probs=95.3
Q ss_pred CCCeEEEecccCcHHHHHHHHcC-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|+.+..+++.| ..|+|+|+|+.|+..|+....... . .+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~-~---~~------------------------- 98 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLN-S---GI------------------------- 98 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC-C------------------------------
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhcc-c---cc-------------------------
Confidence 46799999999998777766664 789999999999999987432210 0 00
Q ss_pred CCCCCCCCCCeeEEeccc------cccc--cCCCceeEEEecccccCc---chHHHHHHHHHHhccCCeEEEEeccc---
Q psy3185 198 NTSDYNDDCDFSMAAGDF------LQVY--VHPNKWDCVATCFFIDCA---NNIVSFIETIFNILKPGGIWINLGPL--- 263 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf------~~~~--~~~~~fD~V~t~ffidta---~n~~~yl~~I~~~LkpGG~~In~gPl--- 263 (298)
. ....++.+.++|. .++. .++++||+|++.+.++.+ +++..++++++++|||||++|...|-
T Consensus 99 ~----~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 99 K----TKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp ------CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred c----ccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 0 0001233444444 2221 245799999988777532 46789999999999999999854431
Q ss_pred -ccccc--------C--------------------C-CC---CC--ccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 264 -LYHYS--------N--------------------M-LN---ED--SIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 264 -~y~~~--------~--------------------~-~~---~~--~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
.+... + . +. .. ..-.++++|.++++++||+++..
T Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~ 243 (302)
T 2vdw_A 175 LSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDN 243 (302)
T ss_dssp HTTCCSCEEEECCSSSCTTTSEEEECEEETTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHhcCCcccccccccccceeeeccccccccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEe
Confidence 11100 0 0 00 00 11357899999999999999753
No 66
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.67 E-value=5.6e-16 Score=134.30 Aligned_cols=102 Identities=17% Similarity=0.110 Sum_probs=86.2
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+++.|.+|+|+|+|+.|+..++....
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~------------------------------------ 94 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTK------------------------------------ 94 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTT------------------------------------
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcc------------------------------------
Confidence 46799999999999999999999999999999999998876211
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchH---HHHHHHHHHhccCCeEEEEecc
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNI---VSFIETIFNILKPGGIWINLGP 262 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~---~~yl~~I~~~LkpGG~~In~gP 262 (298)
...++.+..+|+.++. .+++||+|++...+++.++. ..+++++.++|||||+++...|
T Consensus 95 -----~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 95 -----RWSHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp -----TCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -----cCCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 0137889999998886 57899999999888776665 5789999999999999985443
No 67
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.66 E-value=9.4e-16 Score=132.41 Aligned_cols=124 Identities=16% Similarity=0.091 Sum_probs=96.8
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+ |+ +|+|+|+|+.|+..++...
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~------------------------------------ 76 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA------------------------------------ 76 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC------------------------------------
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC------------------------------------
Confidence 3679999999999999988 88 9999999999999877511
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEecccc---cc-------c
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLL---YH-------Y 267 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~---y~-------~ 267 (298)
.++.+..+|+.+++..+++||+|++...+++.++...++++++++|||||.++...|.. |. .
T Consensus 77 --------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~ 148 (211)
T 2gs9_A 77 --------PEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGE 148 (211)
T ss_dssp --------TTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHH
T ss_pred --------CCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhh
Confidence 14567788888776667899999999999999999999999999999999998654321 10 0
Q ss_pred cCCCC-CCccCCCHHHHHHHHHhCC
Q psy3185 268 SNMLN-EDSIEPSYEVVKQVIQGLG 291 (298)
Q Consensus 268 ~~~~~-~~~~~ls~eEl~~~~~~~G 291 (298)
..... .....+|.+++.++++ |
T Consensus 149 ~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 149 KGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp TTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred ccCccccccccCCHHHHHHHhc--C
Confidence 00000 1234589999999997 7
No 68
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.66 E-value=2.7e-15 Score=132.97 Aligned_cols=100 Identities=24% Similarity=0.400 Sum_probs=81.0
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|+++..+++.|+.|+|+|+|+.|+..++......
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~---------------------------------- 86 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKER---------------------------------- 86 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhc----------------------------------
Confidence 4679999999999999999999999999999999999888633210
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecc---cccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCF---FIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~f---fidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
..++.+..+|+.++.. +++||+|++.+ ...+.+++..+++.++++|||||.+|.
T Consensus 87 ------~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 87 ------NLKIEFLQGDVLEIAF-KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp ------TCCCEEEESCGGGCCC-CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCceEEEECChhhccc-CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 0257789999988754 47899998643 222446788999999999999999873
No 69
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.66 E-value=1.9e-15 Score=138.70 Aligned_cols=140 Identities=9% Similarity=0.030 Sum_probs=102.4
Q ss_pred CCCeEEEecccCcHHHHHHHH--c-CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIAR--R-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~--~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..+|. . +.+|+|+|+|+.|+..++......
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------------------- 166 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH------------------------------- 166 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS-------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc-------------------------------
Confidence 467999999999999999962 2 578999999999999988733210
Q ss_pred CCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHH---HHHHHHHHhccCCeEEEEeccc-------cc
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIV---SFIETIFNILKPGGIWINLGPL-------LY 265 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~---~yl~~I~~~LkpGG~~In~gPl-------~y 265 (298)
....++.+..+|+.++..+ ++||+|++...+++.++.. .++++++++|||||+++..... .+
T Consensus 167 -------~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~ 238 (305)
T 3ocj_A 167 -------ALAGQITLHRQDAWKLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDS 238 (305)
T ss_dssp -------TTGGGEEEEECCGGGCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTC
T ss_pred -------CCCCceEEEECchhcCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccc
Confidence 0013588999999998765 9999999987666555544 4899999999999999853311 11
Q ss_pred ccc--CC----------------CCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 266 HYS--NM----------------LNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 266 ~~~--~~----------------~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
.+. .. .......++.+++.++++++||+++..
T Consensus 239 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 288 (305)
T 3ocj_A 239 PWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRF 288 (305)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred cceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEE
Confidence 110 00 000112379999999999999998753
No 70
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=7.1e-16 Score=136.34 Aligned_cols=135 Identities=9% Similarity=-0.127 Sum_probs=101.7
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|+++..|++.|.+|+|+|+|+.|+..++....
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~------------------------------------ 99 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT------------------------------------ 99 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC------------------------------------
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc------------------------------------
Confidence 46799999999999999999999999999999999998876210
Q ss_pred CCCCCCCCCeeEEeccccccccCC-----CceeEEEecccccCcc--hHHHHHHHHHHhccCCeEEEEecccc----c--
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHP-----NKWDCVATCFFIDCAN--NIVSFIETIFNILKPGGIWINLGPLL----Y-- 265 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~-----~~fD~V~t~ffidta~--n~~~yl~~I~~~LkpGG~~In~gPl~----y-- 265 (298)
..++.+..+|+.++.... ..||+|++...++..+ +...++++++++|||||+++...+.. +
T Consensus 100 ------~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~ 173 (245)
T 3ggd_A 100 ------AANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFN 173 (245)
T ss_dssp ------CTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHH
T ss_pred ------ccCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHH
Confidence 136788999988764321 3489999988888777 88999999999999999876432210 0
Q ss_pred c---c-cCC---------CCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 266 H---Y-SNM---------LNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 266 ~---~-~~~---------~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
+ . ... .......++.+|+.+++ .||+++..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--aGf~~~~~ 216 (245)
T 3ggd_A 174 SLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF--PDFEILSQ 216 (245)
T ss_dssp HHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--TTEEEEEE
T ss_pred HHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--CCCEEEec
Confidence 0 0 000 01122347999999999 89999864
No 71
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.66 E-value=3.4e-16 Score=143.36 Aligned_cols=169 Identities=14% Similarity=0.217 Sum_probs=104.7
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhc------------------------ccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREK------------------------NVYKI 172 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~------------------------~~~~i 172 (298)
++.+|||+|||+|.++..||+. +..|+|+|+|+.|+..|+..+...... ....-
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 3679999999999999999998 679999999999999998743221000 00000
Q ss_pred ccccccccccccccccccccccCCCCCC---CCCCCCCeeEEeccccccc-----cCCCceeEEEecccccCc------c
Q psy3185 173 YPWVQQTDNNILTHHQTMAVTFPDINTS---DYNDDCDFSMAAGDFLQVY-----VHPNKWDCVATCFFIDCA------N 238 (298)
Q Consensus 173 ~p~~~~~s~~~~~~~~~r~~~ipd~~~~---~~~~~~~~~~~~gDf~~~~-----~~~~~fD~V~t~ffidta------~ 238 (298)
+|... .....++..|..... ......++.+..+|+.... ...++||+|++...+.+. .
T Consensus 126 ~p~~~--------~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~ 197 (292)
T 3g07_A 126 FPASL--------TASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDE 197 (292)
T ss_dssp ------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHH
T ss_pred ccchh--------hhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHH
Confidence 11100 001111111111100 0001148999999997653 256899999988776444 3
Q ss_pred hHHHHHHHHHHhccCCeEEEEecccccccc-CCC--------CCCccCCCHHHHHHHHHh--CCCEEEE
Q psy3185 239 NIVSFIETIFNILKPGGIWINLGPLLYHYS-NML--------NEDSIEPSYEVVKQVIQG--LGFVYEV 296 (298)
Q Consensus 239 n~~~yl~~I~~~LkpGG~~In~gPl~y~~~-~~~--------~~~~~~ls~eEl~~~~~~--~GF~i~~ 296 (298)
++..+++.++++|||||++|. .|--|... ... ....+.+..+++..++.+ +||+.+.
T Consensus 198 ~~~~~l~~~~~~LkpGG~lil-~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~ 265 (292)
T 3g07_A 198 GLKRMFRRIYRHLRPGGILVL-EPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYE 265 (292)
T ss_dssp HHHHHHHHHHHHEEEEEEEEE-ECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEE-ecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEE
Confidence 788999999999999999984 33222211 000 013466789999999999 9996543
No 72
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.66 E-value=3.4e-16 Score=138.34 Aligned_cols=148 Identities=14% Similarity=0.083 Sum_probs=102.0
Q ss_pred HHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 101 EPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 101 ~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
.+++..+....+ .++.+|||+|||+|.++..+++.+. .|+|+|+|+.|+..++.....
T Consensus 47 ~~~~~~l~~~~~-----~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~---------------- 105 (236)
T 1zx0_A 47 TPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR---------------- 105 (236)
T ss_dssp HHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGG----------------
T ss_pred HHHHHHHHhhcC-----CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHh----------------
Confidence 346666665544 2467999999999999999998877 799999999999998863211
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEecccccc--ccCCCceeEEEe-ccccc----CcchHHHHHHHHHHhcc
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQV--YVHPNKWDCVAT-CFFID----CANNIVSFIETIFNILK 252 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~--~~~~~~fD~V~t-~ffid----ta~n~~~yl~~I~~~Lk 252 (298)
...++.++.+|+.++ ...+++||+|++ .|.+. +..+...++++++++||
T Consensus 106 ------------------------~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lk 161 (236)
T 1zx0_A 106 ------------------------QTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLK 161 (236)
T ss_dssp ------------------------CSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEE
T ss_pred ------------------------cCCCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcC
Confidence 013688999999887 566789999998 55431 23445578999999999
Q ss_pred CCeEEEEeccccccccCCCC-CCccCCCHHHHHHHHHhCCCE
Q psy3185 253 PGGIWINLGPLLYHYSNMLN-EDSIEPSYEVVKQVIQGLGFV 293 (298)
Q Consensus 253 pGG~~In~gPl~y~~~~~~~-~~~~~ls~eEl~~~~~~~GF~ 293 (298)
|||+++.+....+....... ........++....+.+.||.
T Consensus 162 pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~ 203 (236)
T 1zx0_A 162 PGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFR 203 (236)
T ss_dssp EEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCC
T ss_pred CCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCC
Confidence 99999854322121000000 011112235566778899997
No 73
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1e-15 Score=139.92 Aligned_cols=148 Identities=13% Similarity=0.124 Sum_probs=110.4
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHH---cCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIAR---RGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~---~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
.+.+.|..+.+ .++.+|||+|||+|.++..|++ .+..|+|+|+|+.|+..++.......
T Consensus 24 ~~~~~l~~~~~-----~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------------- 85 (299)
T 3g5t_A 24 DFYKMIDEYHD-----GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP------------- 85 (299)
T ss_dssp HHHHHHHHHCC-----SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-------------
T ss_pred HHHHHHHHHhc-----CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc-------------
Confidence 46677777654 2478999999999999999994 57889999999999999887433200
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCC------CceeEEEecccccCcchHHHHHHHHHHhcc
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHP------NKWDCVATCFFIDCANNIVSFIETIFNILK 252 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~------~~fD~V~t~ffidta~n~~~yl~~I~~~Lk 252 (298)
....++.+..+|+.++...+ ++||+|++...+++. ++..+++++.++||
T Consensus 86 ------------------------~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~Lk 140 (299)
T 3g5t_A 86 ------------------------DTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLR 140 (299)
T ss_dssp -------------------------CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEE
T ss_pred ------------------------CCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcC
Confidence 00147889999998877665 899999999999888 99999999999999
Q ss_pred CCeEEEEe---cccc------------ccccCCCCCCccC-CCHHHHHHHHHhCCC
Q psy3185 253 PGGIWINL---GPLL------------YHYSNMLNEDSIE-PSYEVVKQVIQGLGF 292 (298)
Q Consensus 253 pGG~~In~---gPl~------------y~~~~~~~~~~~~-ls~eEl~~~~~~~GF 292 (298)
|||.++.. .|.. |.+....-.+... ...+.+.++++..||
T Consensus 141 pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~~gf 196 (299)
T 3g5t_A 141 KDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRNMLKDSHL 196 (299)
T ss_dssp EEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTTHHHHHHTTTTTCCC
T ss_pred CCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhchhhHHHHHhhhccCC
Confidence 99998742 2221 1111000112233 567788999999999
No 74
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.64 E-value=2.3e-15 Score=134.80 Aligned_cols=138 Identities=14% Similarity=0.058 Sum_probs=100.4
Q ss_pred cchHHHHHHHHHHHhhhccCChHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCH
Q psy3185 72 TDLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSL 151 (298)
Q Consensus 72 ~~~~~v~~~l~~~~RdWs~~g~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~ 151 (298)
.+.....+.+...+..|.... .....+..+.+.+...++ ++.+|||+|||+|.++..+++.|.+|+|+|+|+
T Consensus 15 ~~~~~~~~~~a~~Yd~~~~~~--~~~~~~~~~~~~l~~~~~------~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~ 86 (260)
T 2avn_A 15 LRSWEFYDRIARAYDSMYETP--KWKLYHRLIGSFLEEYLK------NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSK 86 (260)
T ss_dssp CCHHHHHHHHHHHHGGGGCSH--HHHHHHHHHHHHHHHHCC------SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCH
T ss_pred hhhcchhhHHHHHHHHhcccc--chhHHHHHHHHHHHHhcC------CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCH
Confidence 344555556666666655321 112234456667777665 357999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEec
Q psy3185 152 FMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC 231 (298)
Q Consensus 152 ~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ 231 (298)
.|+..++... . .+ +..+|+.++...+++||+|++.
T Consensus 87 ~~l~~a~~~~-----------------------------------------~--~~--~~~~d~~~~~~~~~~fD~v~~~ 121 (260)
T 2avn_A 87 EMLEVAREKG-----------------------------------------V--KN--VVEAKAEDLPFPSGAFEAVLAL 121 (260)
T ss_dssp HHHHHHHHHT-----------------------------------------C--SC--EEECCTTSCCSCTTCEEEEEEC
T ss_pred HHHHHHHhhc-----------------------------------------C--CC--EEECcHHHCCCCCCCEEEEEEc
Confidence 9999887521 0 11 5677777776667899999987
Q ss_pred cc-ccCcchHHHHHHHHHHhccCCeEEEEecc
Q psy3185 232 FF-IDCANNIVSFIETIFNILKPGGIWINLGP 262 (298)
Q Consensus 232 ff-idta~n~~~yl~~I~~~LkpGG~~In~gP 262 (298)
.. .+..+++..+++++.++|||||.++...|
T Consensus 122 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 122 GDVLSYVENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp SSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chhhhccccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 63 44446689999999999999999985433
No 75
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.64 E-value=9.9e-15 Score=125.78 Aligned_cols=134 Identities=14% Similarity=0.013 Sum_probs=102.2
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTD 180 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s 180 (298)
+...+...++. .++.+|||+|||+|.++..+|+.+ ..|+|+|+|+.|+..++......
T Consensus 28 i~~~~l~~l~~----~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~---------------- 87 (204)
T 3e05_A 28 VRAVTLSKLRL----QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF---------------- 87 (204)
T ss_dssp HHHHHHHHTTC----CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH----------------
T ss_pred HHHHHHHHcCC----CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh----------------
Confidence 43444444442 346799999999999999999997 78999999999999988743220
Q ss_pred ccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe
Q psy3185 181 NNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 181 ~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~ 260 (298)
.+ .++.+..+|+.+.....++||+|++...+. ++..+++.+.++|||||.++..
T Consensus 88 --------------------~~---~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 88 --------------------VA---RNVTLVEAFAPEGLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp --------------------TC---TTEEEEECCTTTTCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEE
T ss_pred --------------------CC---CcEEEEeCChhhhhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEE
Confidence 00 367888999877655557899999876554 6789999999999999999864
Q ss_pred ccccccccCCCCCCccCCCHHHHHHHHHhCCCEEE
Q psy3185 261 GPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 261 gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~ 295 (298)
.+.. -+.+++.+++++.||.+.
T Consensus 142 ~~~~-------------~~~~~~~~~l~~~g~~~~ 163 (204)
T 3e05_A 142 AVTL-------------DTLTKAVEFLEDHGYMVE 163 (204)
T ss_dssp ECBH-------------HHHHHHHHHHHHTTCEEE
T ss_pred eccc-------------ccHHHHHHHHHHCCCcee
Confidence 4321 136889999999999643
No 76
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.64 E-value=2.7e-16 Score=139.85 Aligned_cols=149 Identities=14% Similarity=0.035 Sum_probs=103.8
Q ss_pred HHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcC-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 101 EPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRG-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 101 ~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
.|+.+.+.+..+ +++.+|||+|||+|..+..+++.+ .+|+|+|+|+.|+..|+.....
T Consensus 47 ~~~m~~~a~~~~-----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~---------------- 105 (236)
T 3orh_A 47 TPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR---------------- 105 (236)
T ss_dssp HHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGG----------------
T ss_pred HHHHHHHHHhhc-----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhh----------------
Confidence 467777777665 357899999999999999999874 6799999999999998873211
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccc--cCCCceeEEE-----ecccccCcchHHHHHHHHHHhcc
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVY--VHPNKWDCVA-----TCFFIDCANNIVSFIETIFNILK 252 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~--~~~~~fD~V~-----t~ffidta~n~~~yl~~I~~~Lk 252 (298)
...++.+..||+.++. .++++||+|+ +.+.+.+..+...++++++|+||
T Consensus 106 ------------------------~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLk 161 (236)
T 3orh_A 106 ------------------------QTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLK 161 (236)
T ss_dssp ------------------------CSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEE
T ss_pred ------------------------CCCceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeC
Confidence 0135677888876653 3568899885 34556677888999999999999
Q ss_pred CCeEEEEeccccccccCCCC-CCccCCCHHHHHHHHHhCCCEE
Q psy3185 253 PGGIWINLGPLLYHYSNMLN-EDSIEPSYEVVKQVIQGLGFVY 294 (298)
Q Consensus 253 pGG~~In~gPl~y~~~~~~~-~~~~~ls~eEl~~~~~~~GF~i 294 (298)
|||+++.+............ ........+.....+.++||++
T Consensus 162 PGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~ 204 (236)
T 3orh_A 162 PGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp EEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCG
T ss_pred CCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeE
Confidence 99999854322111100000 0111233455666777889974
No 77
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.64 E-value=5.3e-16 Score=136.33 Aligned_cols=114 Identities=12% Similarity=0.105 Sum_probs=92.4
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+++.|..|+|+|+|+.|+..++.. .
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~---------------------------------- 90 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN---A---------------------------------- 90 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH---C----------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh---C----------------------------------
Confidence 367999999999999999999999999999999999988751 0
Q ss_pred CCCCCCCCCeeEEecccc-ccccC-CCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCcc
Q psy3185 199 TSDYNDDCDFSMAAGDFL-QVYVH-PNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSI 276 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~-~~~~~-~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~ 276 (298)
.++.+..+|+. .++.. +++||+|++. .++..++++++++|||||.++..+ -
T Consensus 91 -------~~~~~~~~d~~~~~~~~~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~~--------------~ 143 (226)
T 3m33_A 91 -------PHADVYEWNGKGELPAGLGAPFGLIVSR------RGPTSVILRLPELAAPDAHFLYVG--------------P 143 (226)
T ss_dssp -------TTSEEEECCSCSSCCTTCCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEEE--------------S
T ss_pred -------CCceEEEcchhhccCCcCCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEeC--------------C
Confidence 25678888884 45445 6899999987 355678999999999999998221 1
Q ss_pred CCCHHHHHHHHHhCCCEEEE
Q psy3185 277 EPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 277 ~ls~eEl~~~~~~~GF~i~~ 296 (298)
..+.+++...+.+.||++..
T Consensus 144 ~~~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 144 RLNVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp SSCCTHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEE
Confidence 23467899999999999864
No 78
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.64 E-value=1.3e-15 Score=130.89 Aligned_cols=116 Identities=16% Similarity=0.270 Sum_probs=92.1
Q ss_pred hHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 100 YEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 100 ~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
+..+.+.|.++++ ++.+|||+|||+|.++..+++.|+ .|+|+|+|+.|+..++.....
T Consensus 29 ~~~~~~~l~~~~~------~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--------------- 87 (215)
T 2pxx_A 29 FSSFRALLEPELR------PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--------------- 87 (215)
T ss_dssp HHHHHHHHGGGCC------TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT---------------
T ss_pred HHHHHHHHHHhcC------CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc---------------
Confidence 3456677776654 367999999999999999999998 799999999999988762110
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccC---------------cchHHHH
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDC---------------ANNIVSF 243 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidt---------------a~n~~~y 243 (298)
..++.+..+|+.++...+++||+|++...++. ..++..+
T Consensus 88 --------------------------~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (215)
T 2pxx_A 88 --------------------------VPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQV 141 (215)
T ss_dssp --------------------------CTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHH
T ss_pred --------------------------CCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHH
Confidence 13677888998887666789999998766543 3467899
Q ss_pred HHHHHHhccCCeEEEEecc
Q psy3185 244 IETIFNILKPGGIWINLGP 262 (298)
Q Consensus 244 l~~I~~~LkpGG~~In~gP 262 (298)
++++.++|||||.++...|
T Consensus 142 l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 142 LSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHhCcCCCEEEEEeC
Confidence 9999999999999986543
No 79
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.63 E-value=3.2e-15 Score=128.82 Aligned_cols=132 Identities=16% Similarity=0.146 Sum_probs=102.8
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTD 180 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s 180 (298)
.+++.+....+ ++.+|||+|||+|.++..+++.|. .|+|+|+|+.|+..++..+...
T Consensus 49 ~~~~~l~~~~~------~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---------------- 106 (205)
T 3grz_A 49 LAMLGIERAMV------KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALN---------------- 106 (205)
T ss_dssp HHHHHHHHHCS------SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHHhcc------CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc----------------
Confidence 36666666554 367999999999999999999987 8999999999999888743210
Q ss_pred ccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe
Q psy3185 181 NNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 181 ~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~ 260 (298)
. ..++.+..+|+.+.. +++||+|++...++ .+..+++++.++|||||+++..
T Consensus 107 ----------------------~-~~~v~~~~~d~~~~~--~~~fD~i~~~~~~~---~~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 107 ----------------------G-IYDIALQKTSLLADV--DGKFDLIVANILAE---ILLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp ----------------------T-CCCCEEEESSTTTTC--CSCEEEEEEESCHH---HHHHHGGGSGGGEEEEEEEEEE
T ss_pred ----------------------C-CCceEEEeccccccC--CCCceEEEECCcHH---HHHHHHHHHHHhcCCCCEEEEE
Confidence 0 023788999987753 58999999886553 4678899999999999999854
Q ss_pred ccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 261 GPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 261 gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
++.. -+.+++.+++++.||+++.
T Consensus 159 ~~~~-------------~~~~~~~~~~~~~Gf~~~~ 181 (205)
T 3grz_A 159 GIDY-------------LQLPKIEQALAENSFQIDL 181 (205)
T ss_dssp EEEG-------------GGHHHHHHHHHHTTEEEEE
T ss_pred ecCc-------------ccHHHHHHHHHHcCCceEE
Confidence 3211 1378999999999999875
No 80
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.62 E-value=1e-14 Score=130.93 Aligned_cols=141 Identities=11% Similarity=-0.021 Sum_probs=102.6
Q ss_pred CCCeEEEecccCcHHHHHHHHc-C--CeEEEeeCCHH------HHHHHHHHHhhhhhccccccccccccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-G--YVCQGNEFSLF------MLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQT 189 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G--~~v~g~D~S~~------Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~ 189 (298)
++.+|||+|||+|.++..++++ | ..|+|+|+|+. |+..++..+...
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~------------------------- 97 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG------------------------- 97 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS-------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc-------------------------
Confidence 4679999999999999999998 4 78999999997 998887643210
Q ss_pred cccccCCCCCCCCCCCCCeeEEecc-cc--ccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEecccc--
Q psy3185 190 MAVTFPDINTSDYNDDCDFSMAAGD-FL--QVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLL-- 264 (298)
Q Consensus 190 r~~~ipd~~~~~~~~~~~~~~~~gD-f~--~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~-- 264 (298)
....++.+..+| +. .++..+++||+|++...+++.++...+++.+.++++|||+++...+..
T Consensus 98 -------------~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 98 -------------PLGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQP 164 (275)
T ss_dssp -------------TTGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSC
T ss_pred -------------CCCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 001367788887 42 333456899999999988888888888888888888899987532110
Q ss_pred -----------------cc-c-cCCCCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 265 -----------------YH-Y-SNMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 265 -----------------y~-~-~~~~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
|. . ..........+|.+++.++++++||+++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~ 216 (275)
T 3bkx_A 165 TALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAG 216 (275)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEEC
T ss_pred CchhhhhHHHHHHHHHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEE
Confidence 00 0 000111223589999999999999999864
No 81
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.62 E-value=1.4e-14 Score=125.87 Aligned_cols=122 Identities=12% Similarity=-0.013 Sum_probs=95.5
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+|++|..|+|+|+|+.|+..++......
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~---------------------------------- 100 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTY---------------------------------- 100 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc----------------------------------
Confidence 4679999999999999999999999999999999999988743210
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCC
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEP 278 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~l 278 (298)
.+ ..++.+..+|+.+.....++||+|++...+ +.. +++.+.++|||||.++...+.. -
T Consensus 101 --g~--~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~-------------~ 158 (204)
T 3njr_A 101 --GL--SPRMRAVQGTAPAALADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTL-------------E 158 (204)
T ss_dssp --TC--TTTEEEEESCTTGGGTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSH-------------H
T ss_pred --CC--CCCEEEEeCchhhhcccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCc-------------c
Confidence 01 126889999998854445689999876533 455 9999999999999998543321 1
Q ss_pred CHHHHHHHHHhCCCEEEE
Q psy3185 279 SYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 279 s~eEl~~~~~~~GF~i~~ 296 (298)
+.+++.+++++.||++..
T Consensus 159 ~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 159 SETLLTQLHARHGGQLLR 176 (204)
T ss_dssp HHHHHHHHHHHHCSEEEE
T ss_pred cHHHHHHHHHhCCCcEEE
Confidence 267888899999998865
No 82
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.61 E-value=8.2e-15 Score=134.81 Aligned_cols=147 Identities=10% Similarity=0.134 Sum_probs=104.4
Q ss_pred CCCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++......... . +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~--------------------------~-~- 85 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNR--------------------------R-D- 85 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSS--------------------------S-C-
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhc--------------------------c-c-
Confidence 3679999999999999999976 568999999999999888743321000 0 0
Q ss_pred CCCCCCCCCCeeEEeccccccc----c--CCCceeEEEecccccCc----chHHHHHHHHHHhccCCeEEEEecccc---
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVY----V--HPNKWDCVATCFFIDCA----NNIVSFIETIFNILKPGGIWINLGPLL--- 264 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~----~--~~~~fD~V~t~ffidta----~n~~~yl~~I~~~LkpGG~~In~gPl~--- 264 (298)
. ....++.+..+|+.+.. . .+++||+|++.+.+++. ++...++++++++|||||+++...|-.
T Consensus 86 -~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l 161 (313)
T 3bgv_A 86 -S---EYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFEL 161 (313)
T ss_dssp -C----CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHH
T ss_pred -c---cccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHH
Confidence 0 01136788999988764 2 24699999999988765 556799999999999999998543310
Q ss_pred -----------cc-------ccCCC-----------------CCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 265 -----------YH-------YSNML-----------------NEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 265 -----------y~-------~~~~~-----------------~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
++ +.+.. ..+...++.+++.+++++.||+++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~ 229 (313)
T 3bgv_A 162 IRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYK 229 (313)
T ss_dssp HHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEE
T ss_pred HHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEe
Confidence 11 11100 01122378999999999999999863
No 83
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.60 E-value=5.7e-15 Score=130.96 Aligned_cols=123 Identities=15% Similarity=0.076 Sum_probs=94.4
Q ss_pred CCCeEEEecccCcHHHHHHHH--cCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIAR--RGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~--~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+|. .+..|+|+|+|+.|+..++......
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------------------------- 117 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL-------------------------------- 117 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--------------------------------
Confidence 467999999999999999995 4789999999999999988743210
Q ss_pred CCCCCCCCCCCeeEEeccccccccC---CCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe-ccccccccCCCC
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVH---PNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL-GPLLYHYSNMLN 272 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~---~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~-gPl~y~~~~~~~ 272 (298)
.+ .++.++.+|+.++... +++||+|++..+ .++..+++.+.++|||||+++.. |+.
T Consensus 118 ----~~---~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~g~~--------- 177 (240)
T 1xdz_A 118 ----QL---ENTTFCHDRAETFGQRKDVRESYDIVTARAV----ARLSVLSELCLPLVKKNGLFVALKAAS--------- 177 (240)
T ss_dssp ----TC---SSEEEEESCHHHHTTCTTTTTCEEEEEEECC----SCHHHHHHHHGGGEEEEEEEEEEECC----------
T ss_pred ----CC---CCEEEEeccHHHhcccccccCCccEEEEecc----CCHHHHHHHHHHhcCCCCEEEEEeCCC---------
Confidence 00 2588999999887543 579999998653 56889999999999999999743 221
Q ss_pred CCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 273 EDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 273 ~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
..-..+++.+.++..||++..
T Consensus 178 ---~~~~~~~~~~~l~~~g~~~~~ 198 (240)
T 1xdz_A 178 ---AEEELNAGKKAITTLGGELEN 198 (240)
T ss_dssp ---CHHHHHHHHHHHHHTTEEEEE
T ss_pred ---chHHHHHHHHHHHHcCCeEeE
Confidence 001146678888899998864
No 84
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.60 E-value=1.1e-14 Score=123.37 Aligned_cols=103 Identities=11% Similarity=0.034 Sum_probs=79.0
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+|+++..|+|+|+|+.|+..++..+...
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~---------------------------------- 67 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDL---------------------------------- 67 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHH----------------------------------
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc----------------------------------
Confidence 4679999999999999999999999999999999999988743320
Q ss_pred CCCCCCCCCeeEEeccccccc-cCCCceeEEEecc-ccc--------CcchHHHHHHHHHHhccCCeEEEEe
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCF-FID--------CANNIVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~f-fid--------ta~n~~~yl~~I~~~LkpGG~~In~ 260 (298)
.+ .++.+..+|+..+. ..+++||+|++.+ ++. ...+....++++.++|||||.++..
T Consensus 68 --~~---~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 68 --GI---ENTELILDGHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp --TC---CCEEEEESCGGGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CC---CcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 00 25777778877653 2367899988763 332 3355678899999999999999753
No 85
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.59 E-value=2e-14 Score=132.88 Aligned_cols=138 Identities=14% Similarity=0.114 Sum_probs=104.0
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+++. +.+++|+|+| .|+..++..+...
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~-------------------------------- 211 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ-------------------------------- 211 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc--------------------------------
Confidence 4679999999999999999988 6799999999 9999887643210
Q ss_pred CCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCc--chHHHHHHHHHHhccCCeEEEEeccccccccCCC---
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWINLGPLLYHYSNML--- 271 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~--- 271 (298)
.+ ..++.+..+|+.+... ++.||+|++...++.. ++...++++++++|||||.++...+..-.....+
T Consensus 212 ----~~--~~~v~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~ 284 (335)
T 2r3s_A 212 ----GV--ASRYHTIAGSAFEVDY-GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDA 284 (335)
T ss_dssp ----TC--GGGEEEEESCTTTSCC-CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHH
T ss_pred ----CC--CcceEEEecccccCCC-CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHH
Confidence 00 1368899999987643 3459999998888765 5668999999999999998875544321100000
Q ss_pred ----------CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 272 ----------NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 272 ----------~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
......++.+|+.++++++||++++
T Consensus 285 ~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~ 319 (335)
T 2r3s_A 285 AAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQ 319 (335)
T ss_dssp HHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeee
Confidence 0134568999999999999998875
No 86
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.59 E-value=1.3e-14 Score=125.78 Aligned_cols=110 Identities=22% Similarity=0.241 Sum_probs=87.6
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..++ ..|+|+|+|+.
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~---------------------------------------------- 97 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR---NPVHCFDLASL---------------------------------------------- 97 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC---SCEEEEESSCS----------------------------------------------
T ss_pred CCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC----------------------------------------------
Confidence 35799999999999998884 78999999975
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCC
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEP 278 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~l 278 (298)
++.+..+|+.+++.++++||+|++.+.++. .+...++++++++|||||.++...+.. ...
T Consensus 98 --------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~-----------~~~ 157 (215)
T 2zfu_A 98 --------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS-----------RFE 157 (215)
T ss_dssp --------STTEEESCTTSCSCCTTCEEEEEEESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG-----------GCS
T ss_pred --------CceEEEeccccCCCCCCCEeEEEEehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC-----------CCC
Confidence 112455666665556789999999988874 789999999999999999998654321 112
Q ss_pred CHHHHHHHHHhCCCEEEEe
Q psy3185 279 SYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 279 s~eEl~~~~~~~GF~i~~~ 297 (298)
+.+++.++++++||+++..
T Consensus 158 ~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 158 DVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp CHHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEE
Confidence 7999999999999998753
No 87
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.58 E-value=2.9e-14 Score=119.31 Aligned_cols=122 Identities=11% Similarity=-0.020 Sum_probs=91.7
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++..+...
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------- 72 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL-------------------------------- 72 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT--------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh--------------------------------
Confidence 4679999999999999999998 678999999999999988743210
Q ss_pred CCCCCCCCCCCeeEEeccccccccCC-CceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCc
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHP-NKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDS 275 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~-~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~ 275 (298)
....++ ++.+|..+..... ++||+|++.+.++. ..+++.+.++|||||+++...+..
T Consensus 73 ------~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~----------- 130 (178)
T 3hm2_A 73 ------GVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTV----------- 130 (178)
T ss_dssp ------TCTTSE-EEECCTTGGGGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSH-----------
T ss_pred ------CCCCCE-EEecchHhhhhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecc-----------
Confidence 001256 6778875543333 89999998887766 578999999999999998543311
Q ss_pred cCCCHHHHHHHHHhCCCEEEE
Q psy3185 276 IEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 276 ~~ls~eEl~~~~~~~GF~i~~ 296 (298)
-+..++..++++.|+++..
T Consensus 131 --~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 131 --ESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp --HHHHHHHHHHHHHCCEEEE
T ss_pred --ccHHHHHHHHHHcCCeeEE
Confidence 1256778888888888764
No 88
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.58 E-value=5.9e-14 Score=122.81 Aligned_cols=126 Identities=16% Similarity=0.109 Sum_probs=94.1
Q ss_pred CCCeEEEeccc-CcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAG-LGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG-~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+||| +|.++..+++. +..|+|+|+|+.|+..++..+...
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------------------------- 102 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERN-------------------------------- 102 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHh--------------------------------
Confidence 46799999999 99999999999 899999999999999988743210
Q ss_pred CCCCCCCCCCCeeEEeccccccc-cCCCceeEEEecccc-------------------cCcchHHHHHHHHHHhccCCeE
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFFI-------------------DCANNIVSFIETIFNILKPGGI 256 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ffi-------------------dta~n~~~yl~~I~~~LkpGG~ 256 (298)
. .++.+..+|+..+. ..+++||+|++..-. +....+..+++.+.++|||||.
T Consensus 103 ------~--~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 174 (230)
T 3evz_A 103 ------N--SNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGK 174 (230)
T ss_dssp ------T--CCCEEEECSSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEE
T ss_pred ------C--CCcEEEeCCchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeE
Confidence 0 15678888854332 135899999876221 1122247899999999999999
Q ss_pred EEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 257 WINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 257 ~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
++...|-.+ -..+++.+++++.||++..
T Consensus 175 l~~~~~~~~------------~~~~~~~~~l~~~g~~~~~ 202 (230)
T 3evz_A 175 VALYLPDKE------------KLLNVIKERGIKLGYSVKD 202 (230)
T ss_dssp EEEEEESCH------------HHHHHHHHHHHHTTCEEEE
T ss_pred EEEEecccH------------hHHHHHHHHHHHcCCceEE
Confidence 986544211 1268899999999998765
No 89
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.58 E-value=2.5e-15 Score=133.00 Aligned_cols=143 Identities=14% Similarity=0.057 Sum_probs=88.0
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCC-HHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFS-LFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S-~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..||++ |..|+|+|+| ..|+..|.....+....
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~---------------------------- 75 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG---------------------------- 75 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT----------------------------
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc----------------------------
Confidence 4679999999999999999954 6789999999 88887763321111100
Q ss_pred CCCCCCCCCCCCeeEEeccccccccC-CCceeEEEecccccC-----cchHHHHHHHHHHhccCCeEEEEeccccccccC
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYVH-PNKWDCVATCFFIDC-----ANNIVSFIETIFNILKPGGIWINLGPLLYHYSN 269 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~~-~~~fD~V~t~ffidt-----a~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~ 269 (298)
. ..++.+..+|...++.. .+.+|+|.+.|.... ..+...++++++++|||||.++.....--++..
T Consensus 76 -----~---~~~v~~~~~d~~~l~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~ 147 (225)
T 3p2e_A 76 -----G---LSNVVFVIAAAESLPFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEE 147 (225)
T ss_dssp -----C---CSSEEEECCBTTBCCGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC----
T ss_pred -----C---CCCeEEEEcCHHHhhhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchh
Confidence 0 13688899999887421 245555555543211 112346899999999999999752211111110
Q ss_pred CC--CCCccCCC-----HHHHHHHHHhCCCEEEEe
Q psy3185 270 ML--NEDSIEPS-----YEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 270 ~~--~~~~~~ls-----~eEl~~~~~~~GF~i~~~ 297 (298)
.+ ....-.++ .+|+.+++++.||++...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~ 182 (225)
T 3p2e_A 148 AEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDV 182 (225)
T ss_dssp ----------CCHHHHHSHHHHHHHHHHTCEEEEE
T ss_pred chhhhcCCCCCChhhcchHHHHHHHHHcCCCeeee
Confidence 00 00000122 235999999999998753
No 90
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.58 E-value=1.6e-14 Score=125.52 Aligned_cols=141 Identities=12% Similarity=0.067 Sum_probs=93.7
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHH-HHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFA-SNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~-a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..|+++ +..|+|+|+|+.|+.. ++....+...
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~----------------------------- 77 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAK----------------------------- 77 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGG-----------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhh-----------------------------
Confidence 4679999999999999999998 6889999999999984 4332111000
Q ss_pred CCCCCCCCCCCCeeEEeccccccccCCCceeEEEeccc---c--cCcchHHHHHHHHHHhccCCeEEEE-eccccccccC
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFF---I--DCANNIVSFIETIFNILKPGGIWIN-LGPLLYHYSN 269 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ff---i--dta~n~~~yl~~I~~~LkpGG~~In-~gPl~y~~~~ 269 (298)
....++.+..+|+.+++..+++ |.|...+. + ++.++...++++++++|||||.++. ++...|....
T Consensus 78 -------~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 149 (218)
T 3mq2_A 78 -------GGLPNLLYLWATAERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSV 149 (218)
T ss_dssp -------TCCTTEEEEECCSTTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBC
T ss_pred -------cCCCceEEEecchhhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccc
Confidence 0013788999999998766666 76663331 1 1334447899999999999999874 2222121110
Q ss_pred CCCCCccCCC----HHHHHHHHHhCCCEEEE
Q psy3185 270 MLNEDSIEPS----YEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 270 ~~~~~~~~ls----~eEl~~~~~~~GF~i~~ 296 (298)
......-.++ .+++..++.+.||++..
T Consensus 150 ~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 150 PEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp GGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred cccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 0000111222 45688899999999875
No 91
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.57 E-value=3.2e-14 Score=127.80 Aligned_cols=131 Identities=17% Similarity=0.210 Sum_probs=101.6
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+++.|....+ ++.+|||+|||+|.++..+++.|..|+|+|+|+.|+..++..... +
T Consensus 110 ~~~~l~~~~~------~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~----~-------------- 165 (254)
T 2nxc_A 110 ALKALARHLR------PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKR----N-------------- 165 (254)
T ss_dssp HHHHHHHHCC------TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHH----T--------------
T ss_pred HHHHHHHhcC------CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 5566666543 367999999999999999999999999999999999988763221 0
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEecc
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGP 262 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gP 262 (298)
. ..+.+..+|+.+.. ++++||+|+++... +.+..+++.+.++|||||+++..|+
T Consensus 166 --------------------~--~~v~~~~~d~~~~~-~~~~fD~Vv~n~~~---~~~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 166 --------------------G--VRPRFLEGSLEAAL-PFGPFDLLVANLYA---ELHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp --------------------T--CCCEEEESCHHHHG-GGCCEEEEEEECCH---HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------------------C--CcEEEEECChhhcC-cCCCCCEEEECCcH---HHHHHHHHHHHHHcCCCCEEEEEee
Confidence 0 12667888887643 35789999987543 3467899999999999999987654
Q ss_pred ccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 263 LLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 263 l~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
+.. +.+++.+++++.||+++.
T Consensus 220 ~~~-------------~~~~v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 220 LKD-------------RAPLVREAMAGAGFRPLE 240 (254)
T ss_dssp EGG-------------GHHHHHHHHHHTTCEEEE
T ss_pred ccC-------------CHHHHHHHHHHCCCEEEE
Confidence 321 278999999999999875
No 92
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.55 E-value=4.7e-14 Score=120.23 Aligned_cols=114 Identities=14% Similarity=0.065 Sum_probs=87.7
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
+++.+....+ .++.+|||+|||+|.++.+++++|. .|+|+|+|+.|+..++..+...
T Consensus 33 l~~~l~~~~~-----~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----------------- 90 (189)
T 3p9n_A 33 LFNIVTARRD-----LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEAL----------------- 90 (189)
T ss_dssp HHHHHHHHSC-----CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHH-----------------
T ss_pred HHHHHHhccC-----CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 4555554432 2367999999999999999999887 5999999999999988743210
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEecccccccc--CCCceeEEEecccccC-cchHHHHHHHHHH--hccCCeE
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYV--HPNKWDCVATCFFIDC-ANNIVSFIETIFN--ILKPGGI 256 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~--~~~~fD~V~t~ffidt-a~n~~~yl~~I~~--~LkpGG~ 256 (298)
.+ .++.+..+|+.++.. .+++||+|++..-.+. .+++...++.+.+ +|||||+
T Consensus 91 -------------------~~---~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~ 148 (189)
T 3p9n_A 91 -------------------GL---SGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTV 148 (189)
T ss_dssp -------------------TC---SCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCE
T ss_pred -------------------CC---CceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeE
Confidence 00 368899999988753 3689999998754444 3678899999999 9999999
Q ss_pred EEEe
Q psy3185 257 WINL 260 (298)
Q Consensus 257 ~In~ 260 (298)
++..
T Consensus 149 l~~~ 152 (189)
T 3p9n_A 149 AVVE 152 (189)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9853
No 93
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.55 E-value=6.3e-14 Score=121.84 Aligned_cols=126 Identities=13% Similarity=0.030 Sum_probs=91.6
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+|+. +..|+|+|+|+.|+..++......
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~-------------------------------- 88 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV-------------------------------- 88 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--------------------------------
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc--------------------------------
Confidence 3679999999999999999998 578999999999999887633210
Q ss_pred CCCCCCCCCCCeeEEeccccccc--cCCCceeEEEecccccCcc--------hHHHHHHHHHHhccCCeEEEEecccccc
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVY--VHPNKWDCVATCFFIDCAN--------NIVSFIETIFNILKPGGIWINLGPLLYH 266 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~--~~~~~fD~V~t~ffidta~--------n~~~yl~~I~~~LkpGG~~In~gPl~y~ 266 (298)
.+ .++.++.+|+.++. ..+++||+|++.|-..... ....+++.+.++|||||+++...+-. .
T Consensus 89 ----~~---~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~ 160 (214)
T 1yzh_A 89 ----GV---PNIKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR-G 160 (214)
T ss_dssp ----CC---SSEEEEECCSSCGGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH-H
T ss_pred ----CC---CCEEEEeCCHHHHHhhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH-H
Confidence 00 36888999988765 4568999999886432211 13579999999999999987432210 0
Q ss_pred ccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 267 YSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 267 ~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
..+++.+.+.+.||+++.
T Consensus 161 ------------~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 161 ------------LFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp ------------HHHHHHHHHHHHTCEEEE
T ss_pred ------------HHHHHHHHHHHCCCeeee
Confidence 135666677777777654
No 94
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.55 E-value=4e-14 Score=119.42 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=88.1
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|.++..++++| .|+|+|+|+.|+.. .
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~-----~------------------------------------- 60 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES-----H------------------------------------- 60 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT-----C-------------------------------------
T ss_pred CCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc-----c-------------------------------------
Confidence 5699999999999999999999 99999999999864 0
Q ss_pred CCCCCCCCeeEEeccccccccCCCceeEEEecccccCc---------chHHHHHHHHHHhccCCeEEEEeccccccccCC
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA---------NNIVSFIETIFNILKPGGIWINLGPLLYHYSNM 270 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta---------~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~ 270 (298)
.++.+..+|+.+. ..+++||+|+++.-.... .+....++.+.+.| |||.++...+- .
T Consensus 61 ------~~~~~~~~d~~~~-~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~---~--- 126 (170)
T 3q87_B 61 ------RGGNLVRADLLCS-INQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE---A--- 126 (170)
T ss_dssp ------SSSCEEECSTTTT-BCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG---G---
T ss_pred ------cCCeEEECChhhh-cccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec---C---
Confidence 2466888998774 345899999987544322 23367888888888 99998754321 1
Q ss_pred CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 271 LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 271 ~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
-..+++.+++++.||+.+.
T Consensus 127 -------~~~~~l~~~l~~~gf~~~~ 145 (170)
T 3q87_B 127 -------NRPKEVLARLEERGYGTRI 145 (170)
T ss_dssp -------GCHHHHHHHHHHTTCEEEE
T ss_pred -------CCHHHHHHHHHHCCCcEEE
Confidence 1378999999999999864
No 95
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.55 E-value=1.4e-13 Score=115.02 Aligned_cols=131 Identities=15% Similarity=0.111 Sum_probs=99.3
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+.+.+.+.++. .++.+|||+|||+|.++..+++.+..|+|+|+|+.|+..++..+...
T Consensus 23 ~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------ 80 (183)
T 2yxd_A 23 IRAVSIGKLNL----NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKF------------------ 80 (183)
T ss_dssp HHHHHHHHHCC----CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHHcCC----CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHc------------------
Confidence 44444444432 24679999999999999999998889999999999999888743210
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEecc
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGP 262 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gP 262 (298)
.+ .++.+..+|+.+. .++++||+|++... .++..+++.+.++ |||.++...+
T Consensus 81 ------------------~~---~~~~~~~~d~~~~-~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 81 ------------------NI---KNCQIIKGRAEDV-LDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp ------------------TC---CSEEEEESCHHHH-GGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred ------------------CC---CcEEEEECCcccc-ccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEec
Confidence 00 2678899998873 34579999998776 6778899999998 9999986543
Q ss_pred ccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 263 LLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 263 l~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
... +.+++.+.+++.||.+..
T Consensus 133 ~~~-------------~~~~~~~~l~~~g~~~~~ 153 (183)
T 2yxd_A 133 VLE-------------NAAKIINEFESRGYNVDA 153 (183)
T ss_dssp CHH-------------HHHHHHHHHHHTTCEEEE
T ss_pred ccc-------------cHHHHHHHHHHcCCeEEE
Confidence 211 157889999999998764
No 96
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.55 E-value=3.3e-14 Score=133.27 Aligned_cols=101 Identities=22% Similarity=0.259 Sum_probs=83.7
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+|+.|. .|+|+|+|+ |+..++......
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~--------------------------------- 109 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLN--------------------------------- 109 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHc---------------------------------
Confidence 367999999999999999999987 799999996 998887643220
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecc---cccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCF---FIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~f---fidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
.+ ..++.+..+|+.++..++++||+|++.. ++....++..+++++.++|||||.+|
T Consensus 110 ---~~--~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 110 ---KL--EDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ---TC--TTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred ---CC--CCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 00 1378899999988866668999999754 67777888899999999999999987
No 97
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.55 E-value=9.7e-14 Score=116.73 Aligned_cols=123 Identities=18% Similarity=0.166 Sum_probs=94.7
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+++.+..|+|+|.|+.|+..++..+...
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~---------------------------------- 78 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRH---------------------------------- 78 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHc----------------------------------
Confidence 4679999999999999999999989999999999999887643210
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCC
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEP 278 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~l 278 (298)
....++.+..+|+.+.....++||+|++...+ +++..+++.+.++|||||.++...+. . -
T Consensus 79 ----~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~---~~~~~~l~~~~~~l~~gG~l~~~~~~---~----------~ 138 (192)
T 1l3i_A 79 ----GLGDNVTLMEGDAPEALCKIPDIDIAVVGGSG---GELQEILRIIKDKLKPGGRIIVTAIL---L----------E 138 (192)
T ss_dssp ----TCCTTEEEEESCHHHHHTTSCCEEEEEESCCT---TCHHHHHHHHHHTEEEEEEEEEEECB---H----------H
T ss_pred ----CCCcceEEEecCHHHhcccCCCCCEEEECCch---HHHHHHHHHHHHhcCCCcEEEEEecC---c----------c
Confidence 00136788889987733333689999987654 35688999999999999998854331 1 1
Q ss_pred CHHHHHHHHHhCCCEEE
Q psy3185 279 SYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 279 s~eEl~~~~~~~GF~i~ 295 (298)
+.+++.+++++.||.+.
T Consensus 139 ~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 139 TKFEAMECLRDLGFDVN 155 (192)
T ss_dssp HHHHHHHHHHHTTCCCE
T ss_pred hHHHHHHHHHHCCCceE
Confidence 26788999999999554
No 98
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.54 E-value=1e-13 Score=116.80 Aligned_cols=118 Identities=15% Similarity=0.120 Sum_probs=89.8
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
..+.+.+.++. .++.+|||+|||+|.++..+++.+..|+|+|+|+.|+..++..+...
T Consensus 40 ~~~~l~~~~~~----~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~------------------ 97 (194)
T 1dus_A 40 GTKILVENVVV----DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLN------------------ 97 (194)
T ss_dssp HHHHHHHHCCC----CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHHccc----CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHc------------------
Confidence 44555555542 24679999999999999999999999999999999999888743210
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccC-cchHHHHHHHHHHhccCCeEEEEec
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDC-ANNIVSFIETIFNILKPGGIWINLG 261 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidt-a~n~~~yl~~I~~~LkpGG~~In~g 261 (298)
.++ ..++.+..+|+.+.. .+++||+|++...++. ..++..+++.+.++|||||.++...
T Consensus 98 ------------------~~~-~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 98 ------------------NLD-NYDIRVVHSDLYENV-KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp ------------------TCT-TSCEEEEECSTTTTC-TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCC-ccceEEEECchhccc-ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 000 013788899987753 4679999998766554 5677899999999999999998654
Q ss_pred c
Q psy3185 262 P 262 (298)
Q Consensus 262 P 262 (298)
|
T Consensus 158 ~ 158 (194)
T 1dus_A 158 Q 158 (194)
T ss_dssp E
T ss_pred C
Confidence 4
No 99
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.54 E-value=7.6e-14 Score=121.95 Aligned_cols=125 Identities=12% Similarity=0.107 Sum_probs=90.1
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..||+. +..|+|+|+|+.|+..|+..... .
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~---~----------------------------- 85 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKD---S----------------------------- 85 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH---S-----------------------------
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHH---c-----------------------------
Confidence 3679999999999999999988 67899999999999988763321 0
Q ss_pred CCCCCCCCCCCeeEEeccccccc--cCCCceeEEEecccccCcch--------HHHHHHHHHHhccCCeEEEEecccccc
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVY--VHPNKWDCVATCFFIDCANN--------IVSFIETIFNILKPGGIWINLGPLLYH 266 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~--~~~~~fD~V~t~ffidta~n--------~~~yl~~I~~~LkpGG~~In~gPl~y~ 266 (298)
. ..++.++.+|+.++. .++++||.|+.+|-..+... ...+++.++++|||||.++...+-. .
T Consensus 86 ----~---~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~-~ 157 (213)
T 2fca_A 86 ----E---AQNVKLLNIDADTLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR-G 157 (213)
T ss_dssp ----C---CSSEEEECCCGGGHHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH-H
T ss_pred ----C---CCCEEEEeCCHHHHHhhcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH-H
Confidence 0 136889999988764 35688999877653211111 2579999999999999997543210 0
Q ss_pred ccCCCCCCccCCCHHHHHHHHHhCCCEEE
Q psy3185 267 YSNMLNEDSIEPSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 267 ~~~~~~~~~~~ls~eEl~~~~~~~GF~i~ 295 (298)
..+++.+.+.+.||.+.
T Consensus 158 ------------~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 158 ------------LFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp ------------HHHHHHHHHHHHTCEEE
T ss_pred ------------HHHHHHHHHHHCCCccc
Confidence 03456666677787664
No 100
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.54 E-value=1.3e-13 Score=128.63 Aligned_cols=138 Identities=12% Similarity=0.067 Sum_probs=103.8
Q ss_pred CCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
..+|||+|||+|.++..+++. +..++++|+ +.|+..++......
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--------------------------------- 225 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH--------------------------------- 225 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT---------------------------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc---------------------------------
Confidence 679999999999999999987 568999999 78998887643210
Q ss_pred CCCCCCCCCCeeEEecccccccc-CCCceeEEEecccccCcc--hHHHHHHHHHHhccCCeEEEEeccccccccCCC---
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV-HPNKWDCVATCFFIDCAN--NIVSFIETIFNILKPGGIWINLGPLLYHYSNML--- 271 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~-~~~~fD~V~t~ffidta~--n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~--- 271 (298)
+...++.+..+|+.+... .++.||+|++...++... +....+++++++|||||.++...+..-.....+
T Consensus 226 -----~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~ 300 (352)
T 3mcz_A 226 -----DLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALS 300 (352)
T ss_dssp -----TCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHH
T ss_pred -----CCCCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchH
Confidence 001368899999988641 356799999988887554 458999999999999999986543211100000
Q ss_pred ----------CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 272 ----------NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 272 ----------~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.....+.+.+|+.++++++||+++.
T Consensus 301 ~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 301 ADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp HHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 1134578999999999999999875
No 101
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.54 E-value=6.8e-14 Score=131.86 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=103.0
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
...+|||+|||+|.++..++++ +..|+++|+ +.|+..++..+...
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-------------------------------- 225 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGL-------------------------------- 225 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTC--------------------------------
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhc--------------------------------
Confidence 3579999999999999999985 578999999 99999887632210
Q ss_pred CCCCCCCCCCCeeEEeccccccc-cCCCceeEEEecccccCc--chHHHHHHHHHHhccCCeEEEEeccccccccC----
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWINLGPLLYHYSN---- 269 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~---- 269 (298)
....++.+..+||.+.. +-+++||+|++...++.. ++....+++++++|||||.++...++.-....
T Consensus 226 ------~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~ 299 (363)
T 3dp7_A 226 ------SGSERIHGHGANLLDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETAS 299 (363)
T ss_dssp ------TTGGGEEEEECCCCSSSCCCCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHH
T ss_pred ------CcccceEEEEccccccCCCCCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchh
Confidence 00137899999998752 113789999999888744 44578999999999999999764432110000
Q ss_pred ------------CCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 270 ------------MLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 270 ------------~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.......+.|.+|+.++++++||++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~ 338 (363)
T 3dp7_A 300 YCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEE 338 (363)
T ss_dssp HHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESC
T ss_pred hHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEE
Confidence 011234567999999999999999864
No 102
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.54 E-value=1.2e-13 Score=120.70 Aligned_cols=127 Identities=17% Similarity=-0.003 Sum_probs=84.6
Q ss_pred CCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+|+.+ ..|+|+|+|+.|+........ ..
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~---~~----------------------------- 104 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVR---ER----------------------------- 104 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHH---HC-----------------------------
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHh---cC-----------------------------
Confidence 46799999999999999999874 689999999999865443211 10
Q ss_pred CCCCCCCCCCCeeEEecccccc---ccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCC
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQV---YVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNE 273 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~---~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~ 273 (298)
.++.++.+|.... .+..++||+|++.. .+ ......++++++++|||||.++..-+- ..
T Consensus 105 ---------~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~-~~-~~~~~~~l~~~~r~LkpgG~l~i~~~~--~~------ 165 (210)
T 1nt2_A 105 ---------NNIIPLLFDASKPWKYSGIVEKVDLIYQDI-AQ-KNQIEILKANAEFFLKEKGEVVIMVKA--RS------ 165 (210)
T ss_dssp ---------SSEEEECSCTTCGGGTTTTCCCEEEEEECC-CS-TTHHHHHHHHHHHHEEEEEEEEEEEEH--HH------
T ss_pred ---------CCeEEEEcCCCCchhhcccccceeEEEEec-cC-hhHHHHHHHHHHHHhCCCCEEEEEEec--CC------
Confidence 1455566666553 12237899998863 22 233445699999999999999854210 00
Q ss_pred CccCCCHHHHH--H--HHHhCCCEEEEe
Q psy3185 274 DSIEPSYEVVK--Q--VIQGLGFVYEVE 297 (298)
Q Consensus 274 ~~~~ls~eEl~--~--~~~~~GF~i~~~ 297 (298)
.....+.+++. . .+++. |++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~l~~~-f~~~~~ 192 (210)
T 1nt2_A 166 IDSTAEPEEVFKSVLKEMEGD-FKIVKH 192 (210)
T ss_dssp HCTTSCHHHHHHHHHHHHHTT-SEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHhh-cEEeee
Confidence 11233466653 2 26777 998764
No 103
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.54 E-value=1.2e-13 Score=129.58 Aligned_cols=149 Identities=13% Similarity=0.092 Sum_probs=108.2
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
.....+.+.++. .+..+|||+|||+|.++..++++ +.+++|+|+ +.|+..++..+...
T Consensus 177 ~~~~~l~~~~~~----~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--------------- 236 (359)
T 1x19_A 177 FAIQLLLEEAKL----DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK--------------- 236 (359)
T ss_dssp HHHHHHHHHCCC----TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT---------------
T ss_pred hhHHHHHHhcCC----CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc---------------
Confidence 344556666653 24679999999999999999998 568999999 99999887643210
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcch--HHHHHHHHHHhccCCeEE
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANN--IVSFIETIFNILKPGGIW 257 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n--~~~yl~~I~~~LkpGG~~ 257 (298)
.+ ..++.+..+|+.+.+.++ +|+|++.+.++..++ ....+++++++|||||.+
T Consensus 237 ---------------------~~--~~~v~~~~~d~~~~~~~~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l 291 (359)
T 1x19_A 237 ---------------------GV--ADRMRGIAVDIYKESYPE--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRL 291 (359)
T ss_dssp ---------------------TC--TTTEEEEECCTTTSCCCC--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEE
T ss_pred ---------------------CC--CCCEEEEeCccccCCCCC--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEE
Confidence 00 136889999998874333 399999988876665 789999999999999999
Q ss_pred EEeccccccccCCC-----------CCCccC----CCHHHHHHHHHhCCCEEEE
Q psy3185 258 INLGPLLYHYSNML-----------NEDSIE----PSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 258 In~gPl~y~~~~~~-----------~~~~~~----ls~eEl~~~~~~~GF~i~~ 296 (298)
+...+..-.. ..+ .....+ ++.+|+.++++++||++++
T Consensus 292 ~i~e~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~ 344 (359)
T 1x19_A 292 LILDMVIDDP-ENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVT 344 (359)
T ss_dssp EEEEECCCCT-TSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEE
T ss_pred EEEecccCCC-CCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEE
Confidence 7543221000 000 001223 8999999999999999875
No 104
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.54 E-value=3.4e-14 Score=128.84 Aligned_cols=112 Identities=13% Similarity=-0.037 Sum_probs=78.3
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
.++.+.+.++. .++.+|||+|||+|+++..||++|++|+|+|+|+.|+..++..... . +
T Consensus 33 ~~~~il~~l~l----~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~---~-------~------- 91 (261)
T 3iv6_A 33 DRENDIFLENI----VPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALAD---R-------C------- 91 (261)
T ss_dssp HHHHHHHTTTC----CTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSS---S-------C-------
T ss_pred HHHHHHHhcCC----CCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHh---c-------c-------
Confidence 34445555442 3567999999999999999999999999999999999988762210 0 0
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccC--cchHHHHHHHHHHhccCCeEEEE
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDC--ANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidt--a~n~~~yl~~I~~~LkpGG~~In 259 (298)
....+...++......+++||+|++++.+++ .++...+++++.++| |||+++.
T Consensus 92 -----------------------v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~l 146 (261)
T 3iv6_A 92 -----------------------VTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRA 146 (261)
T ss_dssp -----------------------CEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEE
T ss_pred -----------------------ceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEE
Confidence 0111111111000112578999999888764 456788999999999 9999873
No 105
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.53 E-value=6.1e-14 Score=133.15 Aligned_cols=115 Identities=18% Similarity=0.188 Sum_probs=89.6
Q ss_pred HHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 101 EPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 101 ~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
..+.+.|.+..+. .++.+|||+|||+|.++..+|++|. +|+|+|.| .|+..++......
T Consensus 49 ~~~~~~i~~~~~~----~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~--------------- 108 (376)
T 3r0q_C 49 DAYFNAVFQNKHH----FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKAN--------------- 108 (376)
T ss_dssp HHHHHHHHTTTTT----TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHT---------------
T ss_pred HHHHHHHHhcccc----CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHc---------------
Confidence 3344555544332 3467999999999999999999998 89999999 9999888754320
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEec---ccccCcchHHHHHHHHHHhccCCeE
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC---FFIDCANNIVSFIETIFNILKPGGI 256 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~---ffidta~n~~~yl~~I~~~LkpGG~ 256 (298)
.+ ..++.+..+|+.++..+ ++||+|++. +++.....+..+++.++++|||||+
T Consensus 109 ---------------------~~--~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~ 164 (376)
T 3r0q_C 109 ---------------------NL--DHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGV 164 (376)
T ss_dssp ---------------------TC--TTTEEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEE
T ss_pred ---------------------CC--CCeEEEEECchhhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeE
Confidence 01 13588999999888654 899999984 5666667788899999999999999
Q ss_pred EEE
Q psy3185 257 WIN 259 (298)
Q Consensus 257 ~In 259 (298)
+|.
T Consensus 165 li~ 167 (376)
T 3r0q_C 165 MYP 167 (376)
T ss_dssp EES
T ss_pred EEE
Confidence 973
No 106
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.53 E-value=7.2e-14 Score=127.17 Aligned_cols=131 Identities=11% Similarity=0.030 Sum_probs=97.4
Q ss_pred CCeEEEecccC---cHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccccccccccccccc
Q psy3185 120 DVNILVPGAGL---GRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTF 194 (298)
Q Consensus 120 ~~~VLdpGcG~---Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~i 194 (298)
..+|||+|||+ |.++..+++. +..|+|+|+|+.|+..++..+..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------------------------------- 126 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------------------------------- 126 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-------------------------------
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-------------------------------
Confidence 46999999999 9887766664 68999999999999998874310
Q ss_pred CCCCCCCCCCCCCeeEEeccccccc-----------cCCCceeEEEecccccCcch--HHHHHHHHHHhccCCeEEEEec
Q psy3185 195 PDINTSDYNDDCDFSMAAGDFLQVY-----------VHPNKWDCVATCFFIDCANN--IVSFIETIFNILKPGGIWINLG 261 (298)
Q Consensus 195 pd~~~~~~~~~~~~~~~~gDf~~~~-----------~~~~~fD~V~t~ffidta~n--~~~yl~~I~~~LkpGG~~In~g 261 (298)
..++.++.+|+.+.. .+.++||+|++...+++.++ +...+++++++|||||+++...
T Consensus 127 ----------~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 127 ----------DPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp ----------CTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ----------CCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 136788999987531 12358999999888887665 8899999999999999997432
Q ss_pred ccc------------ccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 262 PLL------------YHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 262 Pl~------------y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
... |... ..+....+.+|+.+++ .||+++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 197 LVDTGLPAQQKLARITREN---LGEGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp EBCSSCHHHHHHHHHHHHH---HSCCCCBCHHHHHHTT--TTCEECT
T ss_pred ecCcchHHHHHHHHHHHhc---CCCCccCCHHHHHHHh--CCCeEcc
Confidence 211 1110 1133447999999999 5998763
No 107
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.53 E-value=4e-14 Score=124.72 Aligned_cols=130 Identities=18% Similarity=0.132 Sum_probs=90.8
Q ss_pred CCCeEEEecccCcHHHHHHHHc-C-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-G-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+|+. | ..|+|+|+|+.|+..++.... .
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~---~------------------------------ 120 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACA---E------------------------------ 120 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTT---T------------------------------
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhh---c------------------------------
Confidence 4679999999999999999988 5 689999999999988775211 0
Q ss_pred CCCCCCCCCCCeeEEeccccc----cccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCC
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQ----VYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLN 272 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~----~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~ 272 (298)
..++.+..+|+.+ .... ++||+|+.. +........+++++.++|||||+++.. +.....+ ..
T Consensus 121 --------~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~--~~~~~~~-~~ 186 (230)
T 1fbn_A 121 --------RENIIPILGDANKPQEYANIV-EKVDVIYED--VAQPNQAEILIKNAKWFLKKGGYGMIA--IKARSID-VT 186 (230)
T ss_dssp --------CTTEEEEECCTTCGGGGTTTS-CCEEEEEEC--CCSTTHHHHHHHHHHHHEEEEEEEEEE--EEGGGTC-SS
T ss_pred --------CCCeEEEECCCCCcccccccC-ccEEEEEEe--cCChhHHHHHHHHHHHhCCCCcEEEEE--EecCCCC-CC
Confidence 0367788888876 4333 789999832 122222367899999999999999853 1111111 01
Q ss_pred CCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 273 EDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 273 ~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.+...+..+++. ++++.||+++.
T Consensus 187 ~~~~~~~~~~l~-~l~~~Gf~~~~ 209 (230)
T 1fbn_A 187 KDPKEIFKEQKE-ILEAGGFKIVD 209 (230)
T ss_dssp SCHHHHHHHHHH-HHHHHTEEEEE
T ss_pred CCHHHhhHHHHH-HHHHCCCEEEE
Confidence 111133458888 88899999865
No 108
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.53 E-value=4.8e-14 Score=132.53 Aligned_cols=100 Identities=20% Similarity=0.201 Sum_probs=83.2
Q ss_pred CCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
+.+|||+|||+|.++..+|+.|. .|+|+|.| .|+..|+......
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~---------------------------------- 111 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKAN---------------------------------- 111 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHT----------------------------------
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHc----------------------------------
Confidence 57999999999999999999987 89999999 5999888744320
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecc---cccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCF---FIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~f---fidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
.+ ..++.++.+|+.++..++++||+|++.. ++.....+..+++.+.++|||||++|
T Consensus 112 --~~--~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 112 --KL--DHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp --TC--TTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred --CC--CCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 01 1358899999999876679999999853 46666788899999999999999987
No 109
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.53 E-value=1.2e-13 Score=123.99 Aligned_cols=162 Identities=10% Similarity=0.035 Sum_probs=107.3
Q ss_pred HHHHHHHHhhhccCChHH-----HhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc--CCeEEEeeCC
Q psy3185 78 QTTLKQFVRDWSEEGSEE-----RKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR--GYVCQGNEFS 150 (298)
Q Consensus 78 ~~~l~~~~RdWs~~g~~E-----R~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S 150 (298)
...+.++..+|....... .+..-..+++.+.-..+.. ..++.+|||+|||+|.++..+|.. +.+|+|+|.|
T Consensus 36 ~~~~~~~l~~~~~~~nl~~i~~~~~~~~~~~~ds~~~l~~~~--~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s 113 (249)
T 3g89_A 36 FSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPL--WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDAT 113 (249)
T ss_dssp HHHHHHHHHHC----------CHHHHHHHHHHHHHGGGGSSC--CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHHHHHHhcCCCCceECCHHHHhhceeeechhhhcccc--cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECC
Confidence 346667777887633221 1111133444443322210 124679999999999999999987 5789999999
Q ss_pred HHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccC---CCceeE
Q psy3185 151 LFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVH---PNKWDC 227 (298)
Q Consensus 151 ~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~---~~~fD~ 227 (298)
..|+..++...... .+ .++.++.+|+.++... .++||+
T Consensus 114 ~~~~~~a~~~~~~~------------------------------------~l---~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 114 RKKVAFVERAIEVL------------------------------------GL---KGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp HHHHHHHHHHHHHH------------------------------------TC---SSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred HHHHHHHHHHHHHh------------------------------------CC---CceEEEECcHHHhhcccccCCCceE
Confidence 99999988743321 01 2588999999887643 379999
Q ss_pred EEecccccCcchHHHHHHHHHHhccCCeEEEEe-ccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 228 VATCFFIDCANNIVSFIETIFNILKPGGIWINL-GPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 228 V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~-gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
|++..+ .++..+++.+.++|||||+++.. |+. +.. ..+++...++..||.+..
T Consensus 155 I~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~-~~~-----------e~~~~~~~l~~~G~~~~~ 208 (249)
T 3g89_A 155 AVARAV----APLCVLSELLLPFLEVGGAAVAMKGPR-VEE-----------ELAPLPPALERLGGRLGE 208 (249)
T ss_dssp EEEESS----CCHHHHHHHHGGGEEEEEEEEEEECSC-CHH-----------HHTTHHHHHHHHTEEEEE
T ss_pred EEECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCC-cHH-----------HHHHHHHHHHHcCCeEEE
Confidence 998643 46778999999999999998742 321 100 144567778888998865
No 110
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.52 E-value=2e-13 Score=125.81 Aligned_cols=98 Identities=12% Similarity=0.069 Sum_probs=80.0
Q ss_pred CCCCeEEEecccCcHHH-HHHHH-cCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 118 PKDVNILVPGAGLGRLA-FEIAR-RGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 118 ~~~~~VLdpGcG~Grla-~ela~-~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
.++.+|||+|||+|.++ ..+|+ .|..|+|+|+|+.|+..|+....+.
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~------------------------------- 169 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL------------------------------- 169 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH-------------------------------
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc-------------------------------
Confidence 35789999999998765 55676 4899999999999999998754321
Q ss_pred CCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.+ .++.++.||+.++. +++||+|++... .++...++++++++|||||+++.
T Consensus 170 -----gl---~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv 220 (298)
T 3fpf_A 170 -----GV---DGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIY 220 (298)
T ss_dssp -----TC---CSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEE
T ss_pred -----CC---CCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEE
Confidence 01 37889999999874 689999987654 57788999999999999999984
No 111
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.52 E-value=9.8e-14 Score=129.27 Aligned_cols=100 Identities=18% Similarity=0.246 Sum_probs=82.4
Q ss_pred CCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
+.+|||+|||+|.++..+|+.|. .|+|+|.| .|+..++......
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~---------------------------------- 83 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELN---------------------------------- 83 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHT----------------------------------
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHc----------------------------------
Confidence 56999999999999999999987 79999999 6998887643320
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEec---ccccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC---FFIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~---ffidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
.+ ..++.++.+|+.++..+.++||+|++. +++.....+..++..+.++|||||++|
T Consensus 84 --~~--~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 84 --GF--SDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp --TC--TTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred --CC--CCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 01 136889999998886666899999986 456666778899999999999999987
No 112
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.52 E-value=3.7e-13 Score=137.87 Aligned_cols=144 Identities=15% Similarity=0.127 Sum_probs=105.7
Q ss_pred CCCeEEEecccCcHHHHHHHHcC---CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG---YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G---~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|+++..|++.| ..|+|+|+|+.|+..|+..++.....
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnA---------------------------- 772 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNK---------------------------- 772 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTT----------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccch----------------------------
Confidence 36799999999999999999998 78999999999999998754321000
Q ss_pred CCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHH--HHHHHHHHhccCCeEEEEecccc-c----c-c
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIV--SFIETIFNILKPGGIWINLGPLL-Y----H-Y 267 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~--~yl~~I~~~LkpGG~~In~gPl~-y----~-~ 267 (298)
. . ....++.+..||+.++...+++||+|++...+++.++.. .++++++++|||| .+|...|.. | . .
T Consensus 773 --k--r-~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~L 846 (950)
T 3htx_A 773 --E--A-CNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRS 846 (950)
T ss_dssp --T--C-SSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC
T ss_pred --h--h-cCCCceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhc
Confidence 0 0 011378999999999887779999999999998877644 6999999999999 554333321 1 1 0
Q ss_pred --------cCC-------CCCCccCCCHHHHHH----HHHhCCCEEEE
Q psy3185 268 --------SNM-------LNEDSIEPSYEVVKQ----VIQGLGFVYEV 296 (298)
Q Consensus 268 --------~~~-------~~~~~~~ls~eEl~~----~~~~~GF~i~~ 296 (298)
.+. ......+++.+|+.. +..+.||.+.-
T Consensus 847 np~tr~~dPd~~~~~~fRh~DHrFEWTReEFr~Wae~LAer~GYsVef 894 (950)
T 3htx_A 847 TPETQEENNSEPQLPKFRNHDHKFEWTREQFNQWASKLGKRHNYSVEF 894 (950)
T ss_dssp ------------CCSSCSCSSCSCCBCHHHHHHHHHHHHHHTTEEEEE
T ss_pred ccccccccccccccccccccCcceeecHHHHHHHHHHHHHhcCcEEEE
Confidence 000 012346689999988 67778998753
No 113
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.51 E-value=8.3e-14 Score=120.56 Aligned_cols=102 Identities=19% Similarity=0.053 Sum_probs=78.6
Q ss_pred CCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
+.+|||+|||+|.++..++.+|. .|+|+|+|+.|+..++..+...
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~---------------------------------- 99 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTL---------------------------------- 99 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHh----------------------------------
Confidence 56999999999999999888886 7999999999999988733210
Q ss_pred CCCCCCCCCeeEEeccccccccC--CCc-eeEEEecccccCcchHHHHHHHH--HHhccCCeEEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVH--PNK-WDCVATCFFIDCANNIVSFIETI--FNILKPGGIWIN 259 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~--~~~-fD~V~t~ffidta~n~~~yl~~I--~~~LkpGG~~In 259 (298)
.+. ..++.+..+|+.++... +++ ||+|++..... ..+....++.+ .++|||||+++.
T Consensus 100 --~~~-~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i 161 (201)
T 2ift_A 100 --KCS-SEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYV 161 (201)
T ss_dssp --TCC-TTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred --CCC-ccceEEEECCHHHHHHhhccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEE
Confidence 000 02688999998876432 578 99998765433 45677888888 678999999874
No 114
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.51 E-value=8.8e-14 Score=123.45 Aligned_cols=137 Identities=16% Similarity=0.152 Sum_probs=101.3
Q ss_pred hHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccc
Q psy3185 100 YEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWV 176 (298)
Q Consensus 100 ~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~ 176 (298)
|...+..+...++. .++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++..+...
T Consensus 81 ~~~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~------------ 144 (258)
T 2pwy_A 81 YPKDASAMVTLLDL----APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAF------------ 144 (258)
T ss_dssp CHHHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH------------
T ss_pred cchHHHHHHHHcCC----CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh------------
Confidence 33344555555542 34679999999999999999998 578999999999999888743210
Q ss_pred ccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeE
Q psy3185 177 QQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGI 256 (298)
Q Consensus 177 ~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~ 256 (298)
.. ..++.+..+|+.+...++++||+|++. .++...+++.+.++|||||.
T Consensus 145 -------------------------~g-~~~v~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~ 193 (258)
T 2pwy_A 145 -------------------------WQ-VENVRFHLGKLEEAELEEAAYDGVALD-----LMEPWKVLEKAALALKPDRF 193 (258)
T ss_dssp -------------------------CC-CCCEEEEESCGGGCCCCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEEEE
T ss_pred -------------------------cC-CCCEEEEECchhhcCCCCCCcCEEEEC-----CcCHHHHHHHHHHhCCCCCE
Confidence 00 136788899998874456799999873 24556889999999999999
Q ss_pred EEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 257 WINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 257 ~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
++...|..- ...++.+.+++.||..+.
T Consensus 194 l~~~~~~~~-------------~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 194 LVAYLPNIT-------------QVLELVRAAEAHPFRLER 220 (258)
T ss_dssp EEEEESCHH-------------HHHHHHHHHTTTTEEEEE
T ss_pred EEEEeCCHH-------------HHHHHHHHHHHCCCceEE
Confidence 987655321 146778888889998754
No 115
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.51 E-value=2e-13 Score=117.78 Aligned_cols=108 Identities=15% Similarity=0.105 Sum_probs=85.4
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+...+.+.+.. .++.+|||+|||+|.++..+++.+..|+|+|+|+.|+..++..+...
T Consensus 65 ~~~~~~~~l~~----~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~------------------ 122 (210)
T 3lbf_A 65 MVARMTELLEL----TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNL------------------ 122 (210)
T ss_dssp HHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHhcCC----CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHc------------------
Confidence 45555555542 35679999999999999999999999999999999999988743320
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
. ..++.+..+|+.+.....++||+|++...+++..+ .+.++|||||+++.
T Consensus 123 --------------------~-~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~ 172 (210)
T 3lbf_A 123 --------------------D-LHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVL 172 (210)
T ss_dssp --------------------T-CCSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEE
T ss_pred --------------------C-CCceEEEECCcccCCccCCCccEEEEccchhhhhH------HHHHhcccCcEEEE
Confidence 0 02688999999887666789999999877766553 68899999999874
No 116
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.51 E-value=7.3e-14 Score=126.50 Aligned_cols=121 Identities=17% Similarity=0.101 Sum_probs=93.7
Q ss_pred CCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++..+...
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------- 158 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEF------------------------------- 158 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTT-------------------------------
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhc-------------------------------
Confidence 4679999999999999999987 789999999999999887633210
Q ss_pred CCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCc
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDS 275 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~ 275 (298)
....++.+..+|+.+. .++++||+|++ +.++...+++++.++|||||+++...|..-
T Consensus 159 -------~g~~~v~~~~~d~~~~-~~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~---------- 215 (275)
T 1yb2_A 159 -------YDIGNVRTSRSDIADF-ISDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFD---------- 215 (275)
T ss_dssp -------SCCTTEEEECSCTTTC-CCSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH----------
T ss_pred -------CCCCcEEEEECchhcc-CcCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH----------
Confidence 0013678889998874 34578999987 234567899999999999999986655210
Q ss_pred cCCCHHHHHHHHHhCCCEEEE
Q psy3185 276 IEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 276 ~~ls~eEl~~~~~~~GF~i~~ 296 (298)
..+++.+.+++.||..+.
T Consensus 216 ---~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 216 ---QSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp ---HHHHHHHHSGGGTEEEEE
T ss_pred ---HHHHHHHHHHHCCCeEEE
Confidence 256778888889998764
No 117
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.51 E-value=6.7e-13 Score=127.22 Aligned_cols=186 Identities=17% Similarity=0.200 Sum_probs=117.6
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcccCCCCCCccccCCCCCCCcchHHHHHHHHHHHh-------------hhccCChH
Q psy3185 28 LNDLKSCIDKNYEIIKLIIKDVGVMFENVPSSEPIKLISPLPNSTDLEKVQTTLKQFVR-------------DWSEEGSE 94 (298)
Q Consensus 28 l~~~~~~i~~N~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~R-------------dWs~~g~~ 94 (298)
++.+.+.++.=.++++.+.+.-...+.+. .. ...|+ .+-++..|.+.+. .|+++...
T Consensus 86 ~~~~~~l~~~yN~~~~~~~~~~~g~~~~~------~~-~~~~~---~~~~~~Il~~~Y~r~V~~~~~L~~Ye~Fs~~vYG 155 (438)
T 3uwp_A 86 FESMQRLCDKYNRAIDSIHQLWKGTTQPM------KL-NTRPS---TGLLRHILQQVYNHSVTDPEKLNNYEPFSPEVYG 155 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSSCCC------CC-SBCCC---HHHHHHHHHHHHHHHCSCGGGSCCCSSSCGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCcc------cc-cCCCC---HHHHHHHHHHHHhhcCCCHHHhcCcccCCCcccC
Confidence 55566677766677777776432211111 01 11232 2456666666654 34443322
Q ss_pred HHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CCe-EEEeeCCHHHHHHHHHHHhhhhhc-cccc
Q psy3185 95 ERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GYV-CQGNEFSLFMLFASNFILNKCREK-NVYK 171 (298)
Q Consensus 95 ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~~-v~g~D~S~~Ml~~a~~~l~~~~~~-~~~~ 171 (298)
|. ....+..+.+.+.. .++.+|||+|||+|+++..+|.. |.. |+|+|+|+.|+..|+.......+. ...
T Consensus 156 Et---~~~~i~~il~~l~l----~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~- 227 (438)
T 3uwp_A 156 ET---SFDLVAQMIDEIKM----TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWY- 227 (438)
T ss_dssp GT---HHHHHHHHHHHHCC----CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CC---CHHHHHHHHHhcCC----CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHh-
Confidence 32 22344444444432 35789999999999999999965 775 999999999999987643221100 000
Q ss_pred cccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCC--CceeEEEecccccCcchHHHHHHHHHH
Q psy3185 172 IYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHP--NKWDCVATCFFIDCANNIVSFIETIFN 249 (298)
Q Consensus 172 i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~--~~fD~V~t~ffidta~n~~~yl~~I~~ 249 (298)
. +. ..++.++.|||.+++..+ +.||+|++..++. .+++...|.+|++
T Consensus 228 ------------------------G-----l~-~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~R 276 (438)
T 3uwp_A 228 ------------------------G-----KK-HAEYTLERGDFLSEEWRERIANTSVIFVNNFAF-GPEVDHQLKERFA 276 (438)
T ss_dssp ------------------------T-----BC-CCEEEEEECCTTSHHHHHHHHTCSEEEECCTTC-CHHHHHHHHHHHT
T ss_pred ------------------------C-----CC-CCCeEEEECcccCCccccccCCccEEEEccccc-CchHHHHHHHHHH
Confidence 0 00 137899999999886533 5799998765443 4688889999999
Q ss_pred hccCCeEEEEecc
Q psy3185 250 ILKPGGIWINLGP 262 (298)
Q Consensus 250 ~LkpGG~~In~gP 262 (298)
.|||||.+|..-+
T Consensus 277 vLKPGGrIVssE~ 289 (438)
T 3uwp_A 277 NMKEGGRIVSSKP 289 (438)
T ss_dssp TSCTTCEEEESSC
T ss_pred cCCCCcEEEEeec
Confidence 9999999996544
No 118
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.51 E-value=2.3e-13 Score=123.89 Aligned_cols=128 Identities=19% Similarity=0.118 Sum_probs=96.5
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCe-EEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYV-CQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~-v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+|+.|.. |+|+|+|+.|+..++.-... +
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~----n----------------------------- 171 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHL----N----------------------------- 171 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHH----c-----------------------------
Confidence 3679999999999999999999985 99999999999988763221 0
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccC
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIE 277 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ 277 (298)
.+ ..++.+..+|+.++.. .++||+|++.. ......+++.+.++|||||+++......-+ ....
T Consensus 172 ---~~--~~~v~~~~~D~~~~~~-~~~fD~Vi~~~----p~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-------~~~~ 234 (278)
T 2frn_A 172 ---KV--EDRMSAYNMDNRDFPG-ENIADRILMGY----VVRTHEFIPKALSIAKDGAIIHYHNTVPEK-------LMPR 234 (278)
T ss_dssp ---TC--TTTEEEECSCTTTCCC-CSCEEEEEECC----CSSGGGGHHHHHHHEEEEEEEEEEEEEEGG-------GTTT
T ss_pred ---CC--CceEEEEECCHHHhcc-cCCccEEEECC----chhHHHHHHHHHHHCCCCeEEEEEEeeccc-------cccc
Confidence 01 1257899999988865 78999998743 334467899999999999998743211000 1123
Q ss_pred CCHHHHHHHHHhCCCEEEE
Q psy3185 278 PSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 278 ls~eEl~~~~~~~GF~i~~ 296 (298)
-..+++.+.+++.||++..
T Consensus 235 ~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 235 EPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp TTHHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHHcCCeeEE
Confidence 3578999999999998864
No 119
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.51 E-value=3.9e-14 Score=122.64 Aligned_cols=121 Identities=12% Similarity=0.114 Sum_probs=97.1
Q ss_pred hHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhcccc
Q psy3185 93 SEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVY 170 (298)
Q Consensus 93 ~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~ 170 (298)
-.||-++|+++.+.+..+++. ..+|||+|||+|-+|..++.. +..|+|+|+|+.|+..++..+...
T Consensus 29 TReRLp~ld~fY~~~~~~l~~------~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~------ 96 (200)
T 3fzg_A 29 TNERVATLNDFYTYVFGNIKH------VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL------ 96 (200)
T ss_dssp HHTTGGGHHHHHHHHHHHSCC------CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS------
T ss_pred HHHHhHhHHHHHHHHHhhcCC------CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc------
Confidence 457778899999998888863 679999999999999999887 678999999999999998754320
Q ss_pred ccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHh
Q psy3185 171 KIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNI 250 (298)
Q Consensus 171 ~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~ 250 (298)
....++.+ +|+.+. ..+++||+|+..-.|+..++....+..+++.
T Consensus 97 --------------------------------g~~~~v~~--~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~ 141 (200)
T 3fzg_A 97 --------------------------------KTTIKYRF--LNKESD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQL 141 (200)
T ss_dssp --------------------------------CCSSEEEE--ECCHHH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHT
T ss_pred --------------------------------CCCccEEE--eccccc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHH
Confidence 00113433 666554 3578999999998888887777788899999
Q ss_pred ccCCeEEEEe
Q psy3185 251 LKPGGIWINL 260 (298)
Q Consensus 251 LkpGG~~In~ 260 (298)
|||||++|++
T Consensus 142 L~pggvfISf 151 (200)
T 3fzg_A 142 FHTQNFVISF 151 (200)
T ss_dssp CEEEEEEEEE
T ss_pred hCCCCEEEEe
Confidence 9999999986
No 120
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.50 E-value=5.4e-13 Score=125.91 Aligned_cols=148 Identities=15% Similarity=0.148 Sum_probs=107.8
Q ss_pred HHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 104 ISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 104 ~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
...+.+.++. .+..+|||+|||+|.++..++++ +..++++|+ +.|+..++..+...
T Consensus 191 ~~~l~~~~~~----~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~----------------- 248 (369)
T 3gwz_A 191 AGQVAAAYDF----SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR----------------- 248 (369)
T ss_dssp HHHHHHHSCC----TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHhCCC----ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc-----------------
Confidence 4455556653 24679999999999999999998 568999999 99999888643210
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchH--HHHHHHHHHhccCCeEEEE
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNI--VSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~--~~yl~~I~~~LkpGG~~In 259 (298)
.+ ..++.+..+||.+-. +..||+|++...++..++. ...+++++++|||||.++.
T Consensus 249 -------------------~l--~~~v~~~~~d~~~~~--p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i 305 (369)
T 3gwz_A 249 -------------------GL--ADRCEILPGDFFETI--PDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLV 305 (369)
T ss_dssp -------------------TC--TTTEEEEECCTTTCC--CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred -------------------Cc--CCceEEeccCCCCCC--CCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 00 147899999998432 2389999998888766554 4799999999999999986
Q ss_pred ecccccccc-------CC---CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 260 LGPLLYHYS-------NM---LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 260 ~gPl~y~~~-------~~---~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
..+..-... +. ......+.|.+|+.++++++||++++
T Consensus 306 ~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 352 (369)
T 3gwz_A 306 IDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVER 352 (369)
T ss_dssp EEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEE
T ss_pred EEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEE
Confidence 443211100 00 00123468999999999999999875
No 121
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.50 E-value=2.6e-13 Score=125.81 Aligned_cols=137 Identities=10% Similarity=0.041 Sum_probs=102.1
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
+..+|||+|||+|.++..+++. +..++++|+ +.|+..++..+...
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-------------------------------- 215 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT-------------------------------- 215 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc--------------------------------
Confidence 3579999999999999999986 467999999 99999887643210
Q ss_pred CCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcch--HHHHHHHHHHhccCCeEEEEeccccccccCC----
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANN--IVSFIETIFNILKPGGIWINLGPLLYHYSNM---- 270 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n--~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~---- 270 (298)
.+ ..++.+..+||.+-. +.+||+|++...++..++ ....+++++++|||||+++...+..-.....
T Consensus 216 ----~~--~~~v~~~~~d~~~~~--p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d 287 (332)
T 3i53_A 216 ----GL--SGRAQVVVGSFFDPL--PAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMD 287 (332)
T ss_dssp ----TC--TTTEEEEECCTTSCC--CCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHH
T ss_pred ----Cc--CcCeEEecCCCCCCC--CCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHH
Confidence 00 147899999997432 238999999988876655 5889999999999999998654422111000
Q ss_pred ----CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 271 ----LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 271 ----~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
......+.|.+|+.++++++||++++
T Consensus 288 ~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 317 (332)
T 3i53_A 288 LRMLTYFGGKERSLAELGELAAQAGLAVRA 317 (332)
T ss_dssp HHHHHHHSCCCCCHHHHHHHHHHTTEEEEE
T ss_pred HHHHhhCCCCCCCHHHHHHHHHHCCCEEEE
Confidence 00123568999999999999999875
No 122
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.50 E-value=2e-13 Score=130.05 Aligned_cols=118 Identities=20% Similarity=0.295 Sum_probs=90.3
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
.+++.+.+..+.. ..++.+|||+|||+|.++..++++|.+|+|+|+|+.|+..++..+...
T Consensus 218 ~ll~~l~~~l~~~--~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~----------------- 278 (381)
T 3dmg_A 218 LLLEALQERLGPE--GVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEAN----------------- 278 (381)
T ss_dssp HHHHHHHHHHCTT--TTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHHhhccc--CCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 3555555543200 124679999999999999999999999999999999999988733210
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccC-----cchHHHHHHHHHHhccCCeE
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDC-----ANNIVSFIETIFNILKPGGI 256 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidt-----a~n~~~yl~~I~~~LkpGG~ 256 (298)
..++.+..+|+.+...++++||+|++...++. ......+++.+.++|||||.
T Consensus 279 -----------------------~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~ 335 (381)
T 3dmg_A 279 -----------------------ALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGV 335 (381)
T ss_dssp -----------------------TCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEE
T ss_pred -----------------------CCCeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcE
Confidence 01367888999887655689999998754444 56778999999999999999
Q ss_pred EEEec
Q psy3185 257 WINLG 261 (298)
Q Consensus 257 ~In~g 261 (298)
++.+.
T Consensus 336 l~iv~ 340 (381)
T 3dmg_A 336 FFLVS 340 (381)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87543
No 123
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.50 E-value=3.9e-13 Score=120.52 Aligned_cols=126 Identities=12% Similarity=0.071 Sum_probs=95.6
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+|+++. .|+|+|+|+.|+..++......
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~--------------------------------- 95 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYN--------------------------------- 95 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHC---------------------------------
Confidence 467999999999999999999976 8999999999999887633210
Q ss_pred CCCCCCCCCCeeEEecccccccc--CCCceeEEEec--cccc---C---------------cchHHHHHHHHHHhccCCe
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV--HPNKWDCVATC--FFID---C---------------ANNIVSFIETIFNILKPGG 255 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~--~~~~fD~V~t~--ffid---t---------------a~n~~~yl~~I~~~LkpGG 255 (298)
+-..++.+..+|+.++.. .+++||+|++. |+-. . ..++..+++.+.++|||||
T Consensus 96 -----~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG 170 (259)
T 3lpm_A 96 -----QLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGG 170 (259)
T ss_dssp -----TCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEE
T ss_pred -----CCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCc
Confidence 001368899999988753 36899999985 3221 0 1345679999999999999
Q ss_pred EEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 256 IWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 256 ~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.++.+.| . -..+++...+.+.||....
T Consensus 171 ~l~~~~~----~----------~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 171 KANFVHR----P----------ERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp EEEEEEC----T----------TTHHHHHHHHHHTTEEEEE
T ss_pred EEEEEEc----H----------HHHHHHHHHHHHCCCceEE
Confidence 9985422 1 1378899999999998764
No 124
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.50 E-value=2.7e-13 Score=118.68 Aligned_cols=108 Identities=20% Similarity=0.120 Sum_probs=84.4
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
.+++.+.+.+.. .++.+|||+|||+|.++..+++.|..|+|+|+|+.|+..++..+..
T Consensus 57 ~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~------------------ 114 (231)
T 1vbf_A 57 NLGIFMLDELDL----HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSY------------------ 114 (231)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTT------------------
T ss_pred HHHHHHHHhcCC----CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhh------------------
Confidence 455666665542 2467999999999999999999999999999999999988763211
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~ 260 (298)
..++.+..+|+.+....+++||+|++...+++.. +.+.++|||||+++..
T Consensus 115 -----------------------~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 115 -----------------------YNNIKLILGDGTLGYEEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILP 164 (231)
T ss_dssp -----------------------CSSEEEEESCGGGCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEE
T ss_pred -----------------------cCCeEEEECCcccccccCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEE
Confidence 0167788999887444467999999988777654 4688999999998743
No 125
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.49 E-value=2.4e-13 Score=116.06 Aligned_cols=104 Identities=11% Similarity=0.028 Sum_probs=81.2
Q ss_pred CCCeEEEecccCcHHHHHHHHc-C--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-G--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..++++ | ..|+|+|+|+.|+..++..+...
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------- 70 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL------------------------------- 70 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 3679999999999999999987 2 58999999999999988743320
Q ss_pred CCCCCCCCCCCCeeEEeccccccc-cCCCceeEEEeccc---------ccCcchHHHHHHHHHHhccCCeEEEEe
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFF---------IDCANNIVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ff---------idta~n~~~yl~~I~~~LkpGG~~In~ 260 (298)
.+ ..++.+..+|+.++. ..+++||+|++... ++...+...+++.+.++|||||+++..
T Consensus 71 -----~~--~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 71 -----NL--IDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp -----TC--GGGEEEECSCGGGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CC--CCCeEEEECCHHHHhhhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 00 136889999988875 34589999987652 233446678999999999999998754
No 126
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.49 E-value=2.6e-13 Score=125.23 Aligned_cols=134 Identities=22% Similarity=0.240 Sum_probs=94.3
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++.++++. +..|+++|+|+.|+..++..+..... .
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~-----------------------------~ 145 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR-----------------------------S 145 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG-----------------------------G
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc-----------------------------c
Confidence 3579999999999999999987 35899999999999998863311000 0
Q ss_pred CCCCCCCCCCCeeEEecccccccc--CCCceeEEEecccccCc--chH--HHHHHHHHHhccCCeEEEEeccccccccCC
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYV--HPNKWDCVATCFFIDCA--NNI--VSFIETIFNILKPGGIWINLGPLLYHYSNM 270 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~--~~~~fD~V~t~ffidta--~n~--~~yl~~I~~~LkpGG~~In~gPl~y~~~~~ 270 (298)
....++.++.+|+.++.. .+++||+|++..+.... ..+ .++++.++++|||||+++...+-.|.
T Consensus 146 ------~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~---- 215 (304)
T 3bwc_A 146 ------LADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL---- 215 (304)
T ss_dssp ------GGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT----
T ss_pred ------cCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc----
Confidence 001478899999988754 36899999886543322 122 58999999999999999854321111
Q ss_pred CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 271 LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 271 ~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
...+.+++.+.+++.||..+.
T Consensus 216 -----~~~~~~~~~~~l~~~GF~~v~ 236 (304)
T 3bwc_A 216 -----DLELIEKMSRFIRETGFASVQ 236 (304)
T ss_dssp -----CHHHHHHHHHHHHHHTCSEEE
T ss_pred -----chHHHHHHHHHHHhCCCCcEE
Confidence 011367888999999997653
No 127
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.48 E-value=2.9e-13 Score=120.33 Aligned_cols=135 Identities=16% Similarity=0.102 Sum_probs=100.5
Q ss_pred hHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccc
Q psy3185 100 YEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWV 176 (298)
Q Consensus 100 ~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~ 176 (298)
|......+...... .++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++..+...
T Consensus 78 ~~~~~~~i~~~~~~----~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~------------ 141 (255)
T 3mb5_A 78 HPKDAALIVAYAGI----SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA------------ 141 (255)
T ss_dssp CHHHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH------------
T ss_pred cHhHHHHHHHhhCC----CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc------------
Confidence 34445555555542 35679999999999999999998 678999999999999988743221
Q ss_pred ccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeE
Q psy3185 177 QQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGI 256 (298)
Q Consensus 177 ~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~ 256 (298)
.+ ..++.+..+|+.+.. ++++||+|++. .++...+++.+.++|||||.
T Consensus 142 ------------------------~~--~~~v~~~~~d~~~~~-~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~ 189 (255)
T 3mb5_A 142 ------------------------GF--DDRVTIKLKDIYEGI-EEENVDHVILD-----LPQPERVVEHAAKALKPGGF 189 (255)
T ss_dssp ------------------------TC--TTTEEEECSCGGGCC-CCCSEEEEEEC-----SSCGGGGHHHHHHHEEEEEE
T ss_pred ------------------------CC--CCceEEEECchhhcc-CCCCcCEEEEC-----CCCHHHHHHHHHHHcCCCCE
Confidence 00 124889999998763 56789999873 34556789999999999999
Q ss_pred EEEeccccccccCCCCCCccCCCHHHHHHHHHhCC--CEEE
Q psy3185 257 WINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLG--FVYE 295 (298)
Q Consensus 257 ~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~G--F~i~ 295 (298)
++...|... ..+++.+.+++.| |..+
T Consensus 190 l~~~~~~~~-------------~~~~~~~~l~~~g~~f~~~ 217 (255)
T 3mb5_A 190 FVAYTPCSN-------------QVMRLHEKLREFKDYFMKP 217 (255)
T ss_dssp EEEEESSHH-------------HHHHHHHHHHHTGGGBSCC
T ss_pred EEEEECCHH-------------HHHHHHHHHHHcCCCcccc
Confidence 987655321 1567888888888 8643
No 128
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.48 E-value=1.7e-13 Score=117.84 Aligned_cols=116 Identities=8% Similarity=-0.016 Sum_probs=89.7
Q ss_pred CCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
+.+|||+|||+|.++..++.. +..|+|+|+|+.|+..++......
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------------- 112 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL--------------------------------- 112 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT---------------------------------
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc---------------------------------
Confidence 569999999999999999987 678999999999999887643210
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe-ccccccccCCCCCCcc
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL-GPLLYHYSNMLNEDSI 276 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~-gPl~y~~~~~~~~~~~ 276 (298)
. ..++.+..+|+.+.. ..++||+|++.. ..++..+++.+.++|||||+++.. |+
T Consensus 113 ---~---~~~v~~~~~d~~~~~-~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~-------------- 167 (207)
T 1jsx_A 113 ---K---LENIEPVQSRVEEFP-SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALKGQ-------------- 167 (207)
T ss_dssp ---T---CSSEEEEECCTTTSC-CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEESS--------------
T ss_pred ---C---CCCeEEEecchhhCC-ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEeCC--------------
Confidence 0 024788999998875 457999998653 256779999999999999998743 21
Q ss_pred CCCHHHHHHHHHhCCCEEEE
Q psy3185 277 EPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 277 ~ls~eEl~~~~~~~GF~i~~ 296 (298)
...+++.+++. ||++++
T Consensus 168 -~~~~~~~~~~~--g~~~~~ 184 (207)
T 1jsx_A 168 -MPEDEIALLPE--EYQVES 184 (207)
T ss_dssp -CCHHHHHTSCT--TEEEEE
T ss_pred -CchHHHHHHhc--CCceee
Confidence 13567777664 888764
No 129
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.48 E-value=7.6e-13 Score=122.56 Aligned_cols=146 Identities=16% Similarity=0.058 Sum_probs=105.9
Q ss_pred HHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 104 ISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 104 ~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
...+.+.++. .+ .+|||+|||+|.++..++++ +..++++|+ +.|+..++..+....
T Consensus 157 ~~~~~~~~~~----~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---------------- 214 (334)
T 2ip2_A 157 FHEIPRLLDF----RG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL---------------- 214 (334)
T ss_dssp HHHHHHHSCC----TT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH----------------
T ss_pred HHHHHHhCCC----CC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC----------------
Confidence 3455555543 23 79999999999999999987 578999999 999998876322100
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcc--hHHHHHHHHHHhccCCeEEEE
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCAN--NIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~--n~~~yl~~I~~~LkpGG~~In 259 (298)
+ ..++.+..+|+.+. . +++||+|++...++... .....+++++++|||||.++.
T Consensus 215 --------------------~--~~~v~~~~~d~~~~-~-~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i 270 (334)
T 2ip2_A 215 --------------------A--GERVSLVGGDMLQE-V-PSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVV 270 (334)
T ss_dssp --------------------H--TTSEEEEESCTTTC-C-CSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --------------------C--CCcEEEecCCCCCC-C-CCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 0 13688999999873 2 36899999988887444 345899999999999999886
Q ss_pred eccccccccCCC------------CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 260 LGPLLYHYSNML------------NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 260 ~gPl~y~~~~~~------------~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
..+..-.. ..+ .....+.+.+|+.++++++||++++
T Consensus 271 ~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 318 (334)
T 2ip2_A 271 IERTISAS-EPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVER 318 (334)
T ss_dssp EECCBCSS-SCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred EEeccCCC-CCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeE
Confidence 54321100 000 0023457999999999999999875
No 130
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.48 E-value=8.1e-13 Score=124.10 Aligned_cols=137 Identities=17% Similarity=0.145 Sum_probs=100.2
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+++. +..++++|+ +.|+..++..+...
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-------------------------------- 228 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA-------------------------------- 228 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc--------------------------------
Confidence 4679999999999999999988 468999999 99999887633210
Q ss_pred CCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchH--HHHHHHHHHhccCCeEEEEecc--ccccccC---
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNI--VSFIETIFNILKPGGIWINLGP--LLYHYSN--- 269 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~--~~yl~~I~~~LkpGG~~In~gP--l~y~~~~--- 269 (298)
.+ ..++.+..+|+.+.. +..||+|++...++...+. ..++++++++|||||.++...+ ..-....
T Consensus 229 ----~~--~~~v~~~~~d~~~~~--~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~ 300 (374)
T 1qzz_A 229 ----GL--ADRVTVAEGDFFKPL--PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFF 300 (374)
T ss_dssp ----TC--TTTEEEEECCTTSCC--SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHH
T ss_pred ----CC--CCceEEEeCCCCCcC--CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcch
Confidence 00 137889999987632 2349999998888766554 4899999999999998875443 2100000
Q ss_pred -----C---CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 270 -----M---LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 270 -----~---~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
. .......++.+|+.++++++||++++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~ 335 (374)
T 1qzz_A 301 STLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALAS 335 (374)
T ss_dssp HHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEE
T ss_pred hhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 0 00013457999999999999999875
No 131
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.47 E-value=1.7e-14 Score=128.42 Aligned_cols=133 Identities=16% Similarity=0.131 Sum_probs=83.9
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..++++|. .|+|+|+|+.|+..++. +.... ..
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~---~~~~~---~~------------------------- 85 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIR---SDERV---VV------------------------- 85 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHH---TCTTE---EE-------------------------
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHH---hCccc---cc-------------------------
Confidence 467999999999999999999995 89999999999987654 11000 00
Q ss_pred CCCCCCCCCCeeEEe-ccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe-cccccccc----CCC
Q psy3185 198 NTSDYNDDCDFSMAA-GDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL-GPLLYHYS----NML 271 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~-gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~-gPl~y~~~----~~~ 271 (298)
....++.+.. +|+....++..+||+|++.+ ..++++++++|||||.++.+ .|. |... ...
T Consensus 86 -----~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l--------~~~l~~i~rvLkpgG~lv~~~~p~-~e~~~~~~~~~ 151 (232)
T 3opn_A 86 -----MEQFNFRNAVLADFEQGRPSFTSIDVSFISL--------DLILPPLYEILEKNGEVAALIKPQ-FEAGREQVGKN 151 (232)
T ss_dssp -----ECSCCGGGCCGGGCCSCCCSEEEECCSSSCG--------GGTHHHHHHHSCTTCEEEEEECHH-HHSCHHHHC-C
T ss_pred -----cccceEEEeCHhHcCcCCCCEEEEEEEhhhH--------HHHHHHHHHhccCCCEEEEEECcc-cccCHHHhCcC
Confidence 0001121111 33322111334566655432 57899999999999998753 442 1100 000
Q ss_pred ----CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 272 ----NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 272 ----~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.......+.+++.+++++.||+++.
T Consensus 152 G~~~d~~~~~~~~~~l~~~l~~aGf~v~~ 180 (232)
T 3opn_A 152 GIIRDPKVHQMTIEKVLKTATQLGFSVKG 180 (232)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred CeecCcchhHHHHHHHHHHHHHCCCEEEE
Confidence 0011224789999999999999875
No 132
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.47 E-value=2.5e-13 Score=112.63 Aligned_cols=99 Identities=12% Similarity=0.117 Sum_probs=74.0
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|.++..+++.|..|+|+|+|+.|+..++......
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~----------------------------------- 86 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRT----------------------------------- 86 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHH-----------------------------------
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHc-----------------------------------
Confidence 569999999999999999999999999999999999888633210
Q ss_pred CCCCCCCCeeEEecccccccc----CCCceeEEEecccccCcchHHHHHHHHH--HhccCCeEEEEe
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYV----HPNKWDCVATCFFIDCANNIVSFIETIF--NILKPGGIWINL 260 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~----~~~~fD~V~t~ffidta~n~~~yl~~I~--~~LkpGG~~In~ 260 (298)
. .++.+..+|+.+... ..++||+|++....+ .+..+.++.+. ++|||||+++..
T Consensus 87 ---~--~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~ 146 (171)
T 1ws6_A 87 ---G--LGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQ 146 (171)
T ss_dssp ---T--CCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred ---C--CceEEEeccHHHHHHhhhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEE
Confidence 0 156788888877422 134899999873222 23345555555 999999999743
No 133
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.47 E-value=1.1e-13 Score=116.56 Aligned_cols=116 Identities=12% Similarity=0.083 Sum_probs=90.9
Q ss_pred CCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 118 PKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 118 ~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
.++.+|||+|||. | ++|+|+.|+..++....
T Consensus 11 ~~g~~vL~~~~g~-------------v-~vD~s~~ml~~a~~~~~----------------------------------- 41 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-------------S-PVEALKGLVDKLQALTG----------------------------------- 41 (176)
T ss_dssp CTTSEEEEEECTT-------------S-CHHHHHHHHHHHHHHTT-----------------------------------
T ss_pred CCCCEEEEecCCc-------------e-eeeCCHHHHHHHHHhcc-----------------------------------
Confidence 3578999999996 2 39999999998876210
Q ss_pred CCCCCCCCCCeeEEecccccccc---CCCceeEEEecccccCc-chHHHHHHHHHHhccCCeEEEEeccccccccCCCCC
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV---HPNKWDCVATCFFIDCA-NNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNE 273 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~---~~~~fD~V~t~ffidta-~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~ 273 (298)
.++.+..+|+.++.. ++++||+|++++.+++. ++....+++++++|||||+++...|..- . ...
T Consensus 42 --------~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~-~---~~~ 109 (176)
T 2ld4_A 42 --------NEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVET-A---VDN 109 (176)
T ss_dssp --------TTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEES-S---SCS
T ss_pred --------cCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccccc-c---ccc
Confidence 136678888888765 67899999999999988 8899999999999999999987666321 1 111
Q ss_pred CccCCCHHHHHHHHHhCCCEEE
Q psy3185 274 DSIEPSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 274 ~~~~ls~eEl~~~~~~~GF~i~ 295 (298)
.....+.+++.++++++|| +.
T Consensus 110 ~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 110 NSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp SSSSCCHHHHHHHHHHTTC-EE
T ss_pred ccccCCHHHHHHHHHHCCC-cE
Confidence 3344689999999999999 54
No 134
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.47 E-value=1.8e-14 Score=127.11 Aligned_cols=134 Identities=14% Similarity=0.015 Sum_probs=95.5
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|.++..+|+.|..|+|+|+|+.|+..++..+...
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~----------------------------------- 123 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVY----------------------------------- 123 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----------------------------------
T ss_pred CCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc-----------------------------------
Confidence 579999999999999999999999999999999999988743220
Q ss_pred CCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCCC
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPS 279 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ls 279 (298)
.+ ..++.+..+|+.++. .+++||+|++...+....+....+..++++|||||++|.-....+.. +....-....+
T Consensus 124 -~~--~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~~~~~~~-~~~~~lp~~~~ 198 (241)
T 3gdh_A 124 -GI--ADKIEFICGDFLLLA-SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRLSKKITN-NIVYFLPRNAD 198 (241)
T ss_dssp -TC--GGGEEEEESCHHHHG-GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHHHHHHCS-CEEEEEETTBC
T ss_pred -CC--CcCeEEEECChHHhc-ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHHHHhhCC-ceEEECCCCCC
Confidence 00 036889999998886 56899999988766666665557788999999999865211100000 00000122356
Q ss_pred HHHHHHHHHhCCCE
Q psy3185 280 YEVVKQVIQGLGFV 293 (298)
Q Consensus 280 ~eEl~~~~~~~GF~ 293 (298)
.+++..++...|.-
T Consensus 199 ~~~~~~~l~~~g~~ 212 (241)
T 3gdh_A 199 IDQVASLAGPGGQV 212 (241)
T ss_dssp HHHHHHTTCTTCCE
T ss_pred HHHHHHHhccCCCE
Confidence 78888888776643
No 135
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.47 E-value=1.6e-13 Score=122.94 Aligned_cols=105 Identities=18% Similarity=0.240 Sum_probs=82.4
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
.+.+.+...++ .++.+|||+|||+|.++..+++. |..|+|+|+|+.|+..++...
T Consensus 73 ~~~~~~~~~~~-----~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------------------ 129 (269)
T 1p91_A 73 AIVAQLRERLD-----DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------------------ 129 (269)
T ss_dssp HHHHHHHHHSC-----TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------------------
T ss_pred HHHHHHHHhcC-----CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------------------
Confidence 35555565554 24679999999999999999998 789999999999999876510
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.++.+..+|+.+++..+++||+|++.+.. ..++++.++|||||.++.
T Consensus 130 --------------------------~~~~~~~~d~~~~~~~~~~fD~v~~~~~~-------~~l~~~~~~L~pgG~l~~ 176 (269)
T 1p91_A 130 --------------------------PQVTFCVASSHRLPFSDTSMDAIIRIYAP-------CKAEELARVVKPGGWVIT 176 (269)
T ss_dssp --------------------------TTSEEEECCTTSCSBCTTCEEEEEEESCC-------CCHHHHHHHEEEEEEEEE
T ss_pred --------------------------CCcEEEEcchhhCCCCCCceeEEEEeCCh-------hhHHHHHHhcCCCcEEEE
Confidence 14567888887776667899999976542 348999999999999986
Q ss_pred ecc
Q psy3185 260 LGP 262 (298)
Q Consensus 260 ~gP 262 (298)
..|
T Consensus 177 ~~~ 179 (269)
T 1p91_A 177 ATP 179 (269)
T ss_dssp EEE
T ss_pred EEc
Confidence 654
No 136
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.47 E-value=5.9e-13 Score=116.35 Aligned_cols=138 Identities=15% Similarity=0.150 Sum_probs=97.2
Q ss_pred cchHHHHHHHHHHHhhhc--cCChHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---CCeEEE
Q psy3185 72 TDLEKVQTTLKQFVRDWS--EEGSEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---GYVCQG 146 (298)
Q Consensus 72 ~~~~~v~~~l~~~~RdWs--~~g~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---G~~v~g 146 (298)
.|...|..++.++.+.+. ..-..+.. .++..+....+ +.+|||+|||+|..+..+|+. +..|+|
T Consensus 20 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~l~~l~~~~~-------~~~vLdiG~G~G~~~~~la~~~~~~~~v~~ 88 (221)
T 3u81_A 20 GDPQSVLEAIDTYCTQKEWAMNVGDAKG----QIMDAVIREYS-------PSLVLELGAYCGYSAVRMARLLQPGARLLT 88 (221)
T ss_dssp TCHHHHHHHHHHHHHHHTCGGGCCHHHH----HHHHHHHHHHC-------CSEEEEECCTTSHHHHHHHTTSCTTCEEEE
T ss_pred CCHHHHHHHHHHHhhhcCcCcccCHHHH----HHHHHHHHhcC-------CCEEEEECCCCCHHHHHHHHhCCCCCEEEE
Confidence 355678888999887543 22222221 24555544333 569999999999999999984 679999
Q ss_pred eeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEecccccccc-CC---
Q psy3185 147 NEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYV-HP--- 222 (298)
Q Consensus 147 ~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~-~~--- 222 (298)
+|+|+.|+..++..+.... + ..++.+..||+.+... ..
T Consensus 89 vD~~~~~~~~a~~~~~~~~------------------------------------~--~~~v~~~~~d~~~~l~~~~~~~ 130 (221)
T 3u81_A 89 MEINPDCAAITQQMLNFAG------------------------------------L--QDKVTILNGASQDLIPQLKKKY 130 (221)
T ss_dssp EESCHHHHHHHHHHHHHHT------------------------------------C--GGGEEEEESCHHHHGGGTTTTS
T ss_pred EeCChHHHHHHHHHHHHcC------------------------------------C--CCceEEEECCHHHHHHHHHHhc
Confidence 9999999999887443210 0 1358899999876432 12
Q ss_pred --CceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 223 --NKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 223 --~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
++||+|+.....+...+..++++.+ ++|||||+++.
T Consensus 131 ~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~ 168 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLA 168 (221)
T ss_dssp CCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEE
T ss_pred CCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEE
Confidence 6899998765555555556777777 99999999984
No 137
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.47 E-value=2e-13 Score=120.17 Aligned_cols=103 Identities=18% Similarity=0.137 Sum_probs=78.2
Q ss_pred CCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+|+.+ ..|+|+|+|+.|+..++..... .
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~---~----------------------------- 81 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHE---E----------------------------- 81 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH---T-----------------------------
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHH---h-----------------------------
Confidence 46799999999999999999884 5699999999999988763221 0
Q ss_pred CCCCCCCCCCCeeEEeccccccc---cCCCceeEEEecccccCc--chH------HHHHHHHHHhccCCeEEEEe
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVY---VHPNKWDCVATCFFIDCA--NNI------VSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~---~~~~~fD~V~t~ffidta--~n~------~~yl~~I~~~LkpGG~~In~ 260 (298)
. ..|+.+..+|..++. .++++||.|++.|-.... ... ..+++.++++|||||+++..
T Consensus 82 ----~---l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 82 ----G---LSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp ----T---CSSEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred ----C---CCcEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 0 137889999988852 357899999876532211 111 25999999999999999753
No 138
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.46 E-value=1.2e-13 Score=123.19 Aligned_cols=157 Identities=14% Similarity=0.074 Sum_probs=98.8
Q ss_pred HHhhhccCChHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-C--CeEEEeeCCHHHHHHHHHH
Q psy3185 84 FVRDWSEEGSEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-G--YVCQGNEFSLFMLFASNFI 160 (298)
Q Consensus 84 ~~RdWs~~g~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G--~~v~g~D~S~~Ml~~a~~~ 160 (298)
=+|.|++.... +...|..-+..- .-.++.+|||+|||+|.++..+|+. | ..|+|+|+|+.|+..++..
T Consensus 51 e~r~w~p~rsk--------laa~i~~gl~~l-~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~ 121 (233)
T 4df3_A 51 EYREWNAYRSK--------LAAALLKGLIEL-PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTV 121 (233)
T ss_dssp EEEECCTTTCH--------HHHHHHTTCSCC-CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHH
T ss_pred eeeeECCCchH--------HHHHHHhchhhc-CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHh
Confidence 48889864321 333343322100 0146889999999999999999987 5 4699999999999877652
Q ss_pred HhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEecccccc---ccCCCceeEEEecccccCc
Q psy3185 161 LNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQV---YVHPNKWDCVATCFFIDCA 237 (298)
Q Consensus 161 l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~---~~~~~~fD~V~t~ffidta 237 (298)
.. + ..|+..+.+|.... ....+++|+|++.+. ..
T Consensus 122 a~---~--------------------------------------~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~--~~ 158 (233)
T 4df3_A 122 VR---D--------------------------------------RRNIFPILGDARFPEKYRHLVEGVDGLYADVA--QP 158 (233)
T ss_dssp ST---T--------------------------------------CTTEEEEESCTTCGGGGTTTCCCEEEEEECCC--CT
T ss_pred hH---h--------------------------------------hcCeeEEEEeccCccccccccceEEEEEEecc--CC
Confidence 11 1 13555666665432 234578998876543 33
Q ss_pred chHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 238 NNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 238 ~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.+...++.++++.|||||.++..- .+...+....+ .-...+..+.+++.||+++.
T Consensus 159 ~~~~~~l~~~~r~LKpGG~lvI~i--k~r~~d~~~p~--~~~~~~ev~~L~~~GF~l~e 213 (233)
T 4df3_A 159 EQAAIVVRNARFFLRDGGYMLMAI--KARSIDVTTEP--SEVYKREIKTLMDGGLEIKD 213 (233)
T ss_dssp THHHHHHHHHHHHEEEEEEEEEEE--ECCHHHHHTCC--CHHHHHHHHHHHHTTCCEEE
T ss_pred hhHHHHHHHHHHhccCCCEEEEEE--ecccCCCCCCh--HHHHHHHHHHHHHCCCEEEE
Confidence 566789999999999999987421 11111100001 11123445667789999875
No 139
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.45 E-value=4.2e-13 Score=113.05 Aligned_cols=104 Identities=18% Similarity=0.058 Sum_probs=77.4
Q ss_pred CCCeEEEecccCcHHHHHHHHcC-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+++.| ..|+|+|+|+.|+..++.......
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------------------------------- 91 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITK-------------------------------- 91 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhC--------------------------------
Confidence 35799999999999999999987 479999999999998887432210
Q ss_pred CCCCCCCCCCeeEEecccccccc----CCCceeEEEecccccCcchHHHHHHHH--HHhccCCeEEEEec
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV----HPNKWDCVATCFFIDCANNIVSFIETI--FNILKPGGIWINLG 261 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~----~~~~fD~V~t~ffidta~n~~~yl~~I--~~~LkpGG~~In~g 261 (298)
+ ..++.+..+|+.+... .+++||+|++..-.. ..+....++.+ .++|||||+++...
T Consensus 92 ----~--~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 92 ----E--PEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp ----C--GGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred ----C--CcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 0 1367889999887532 267999998863322 23445666666 88999999997543
No 140
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.45 E-value=9.4e-13 Score=124.40 Aligned_cols=129 Identities=14% Similarity=0.102 Sum_probs=95.6
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
+..+|||+|||+|.++..|+++ +..++++|+ +.|+..++.
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------------------------------- 244 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------------------------------------- 244 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------------------------------------
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh-------------------------------------
Confidence 4679999999999999999986 467999999 887653210
Q ss_pred CCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCc--chHHHHHHHHHHhccCCeEEEEeccccccccCCC---
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWINLGPLLYHYSNML--- 271 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~--- 271 (298)
..++.+..|||.+ +.+.+ |+|++.+.++.. ++....|++++++|||||.++...+..-.....+
T Consensus 245 --------~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~ 313 (368)
T 3reo_A 245 --------FSGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIAT 313 (368)
T ss_dssp --------CTTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHH
T ss_pred --------cCCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhh
Confidence 1368899999987 33333 999999888733 4566899999999999999876443211100000
Q ss_pred -------------CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 272 -------------NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 272 -------------~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.....+.|.+|+.++++++||++++
T Consensus 314 ~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~ 351 (368)
T 3reo_A 314 KVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFK 351 (368)
T ss_dssp HHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEE
T ss_pred hHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeE
Confidence 0134567999999999999999875
No 141
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.44 E-value=2.4e-12 Score=116.38 Aligned_cols=134 Identities=19% Similarity=0.242 Sum_probs=98.6
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
.+++.+.+.++ .++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++......
T Consensus 97 ~l~~~~l~~~~-----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~--------------- 156 (276)
T 2b3t_A 97 CLVEQALARLP-----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL--------------- 156 (276)
T ss_dssp HHHHHHHHHSC-----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH---------------
T ss_pred HHHHHHHHhcc-----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc---------------
Confidence 35566666554 13569999999999999999976 678999999999999988733210
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecc-cccC----------------------
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCF-FIDC---------------------- 236 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~f-fidt---------------------- 236 (298)
.+ .++.+..+|+.+.. .+++||+|++.. ++..
T Consensus 157 ---------------------~~---~~v~~~~~d~~~~~-~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~ 211 (276)
T 2b3t_A 157 ---------------------AI---KNIHILQSDWFSAL-AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAAD 211 (276)
T ss_dssp ---------------------TC---CSEEEECCSTTGGG-TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHH
T ss_pred ---------------------CC---CceEEEEcchhhhc-ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCC
Confidence 00 25788999987753 367899999862 1111
Q ss_pred --cchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEE
Q psy3185 237 --ANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVY 294 (298)
Q Consensus 237 --a~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i 294 (298)
......+++.+.++|||||+++...+ + .+.+++.+++++.||+.
T Consensus 212 ~g~~~~~~~l~~~~~~LkpgG~l~~~~~----~----------~~~~~~~~~l~~~Gf~~ 257 (276)
T 2b3t_A 212 SGMADIVHIIEQSRNALVSGGFLLLEHG----W----------QQGEAVRQAFILAGYHD 257 (276)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEECC----S----------SCHHHHHHHHHHTTCTT
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEEEEEC----c----------hHHHHHHHHHHHCCCcE
Confidence 13567889999999999999874311 1 23789999999999964
No 142
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.44 E-value=8.3e-13 Score=114.30 Aligned_cols=100 Identities=13% Similarity=-0.056 Sum_probs=76.5
Q ss_pred CCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
+.+|||+|||+|.++.+++.+|. .|+|+|+|+.|+..++..+...
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~---------------------------------- 100 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATL---------------------------------- 100 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHc----------------------------------
Confidence 56999999999999999998886 7999999999999988633210
Q ss_pred CCCCCCCCCeeEEecccccc-ccCCCceeEEEecccccCcchHHHHHHHHHH--hccCCeEEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQV-YVHPNKWDCVATCFFIDCANNIVSFIETIFN--ILKPGGIWIN 259 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~-~~~~~~fD~V~t~ffidta~n~~~yl~~I~~--~LkpGG~~In 259 (298)
.+ .++.+..+|+.++ ....++||+|++..-.+ ..+....++.+.+ +|||||+++.
T Consensus 101 --~~---~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i 158 (202)
T 2fpo_A 101 --KA---GNARVVNSNAMSFLAQKGTPHNIVFVDPPFR-RGLLEETINLLEDNGWLADEALIYV 158 (202)
T ss_dssp --TC---CSEEEECSCHHHHHSSCCCCEEEEEECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred --CC---CcEEEEECCHHHHHhhcCCCCCEEEECCCCC-CCcHHHHHHHHHhcCccCCCcEEEE
Confidence 00 2688999998874 33457899998764322 3456677888865 5999999874
No 143
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.44 E-value=1.1e-12 Score=114.76 Aligned_cols=130 Identities=18% Similarity=0.105 Sum_probs=90.5
Q ss_pred CCCeEEEecccCcHHHHHHHHc-C--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-G--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..+++. | ..|+|+|+|+.|+..++.....
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-------------------------------- 120 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-------------------------------- 120 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS--------------------------------
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc--------------------------------
Confidence 4679999999999999999987 4 6899999999999877652210
Q ss_pred CCCCCCCCCCCCeeEEeccccccc---cCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCC-C
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVY---VHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNM-L 271 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~---~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~-~ 271 (298)
..++.+..+|+.+.. ..+++||+|++... .......+++.++++|||||+++.. +..... .
T Consensus 121 ---------~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~----~~~~~~~~ 185 (227)
T 1g8a_A 121 ---------RRNIVPILGDATKPEEYRALVPKVDVIFEDVA--QPTQAKILIDNAEVYLKRGGYGMIA----VKSRSIDV 185 (227)
T ss_dssp ---------CTTEEEEECCTTCGGGGTTTCCCEEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEE----EEGGGTCT
T ss_pred ---------cCCCEEEEccCCCcchhhcccCCceEEEECCC--CHhHHHHHHHHHHHhcCCCCEEEEE----EecCCCCC
Confidence 026778888887632 12468999997543 2222345699999999999998754 111111 1
Q ss_pred CCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 272 NEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 272 ~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
..+...++.+++..+ .+. |+++..
T Consensus 186 ~~~~~~~~~~~l~~l-~~~-f~~~~~ 209 (227)
T 1g8a_A 186 TKEPEQVFREVEREL-SEY-FEVIER 209 (227)
T ss_dssp TSCHHHHHHHHHHHH-HTT-SEEEEE
T ss_pred CCChhhhhHHHHHHH-Hhh-ceeeeE
Confidence 112224567888887 677 998753
No 144
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.44 E-value=6.1e-14 Score=120.24 Aligned_cols=123 Identities=13% Similarity=0.041 Sum_probs=77.0
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++..+..
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~--------------------------------- 76 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAER--------------------------------- 76 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC----------------------------------------------
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH---------------------------------
Confidence 4679999999999999999998 56899999999999888752211
Q ss_pred CCCCCCCCCCCeeEEeccccccccC----CCceeEEEecccccC--------------------------cchHHHHHHH
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVH----PNKWDCVATCFFIDC--------------------------ANNIVSFIET 246 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~----~~~fD~V~t~ffidt--------------------------a~n~~~yl~~ 246 (298)
. ..++.+..+|+.+.... .++||+|++..-... ......+++.
T Consensus 77 ------~-~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 149 (215)
T 4dzr_A 77 ------F-GAVVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAAL 149 (215)
T ss_dssp -------------CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTC
T ss_pred ------h-CCceEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHH
Confidence 0 01566788888773321 389999988521110 1112678899
Q ss_pred HHHhccCCeE-EEEeccccccccCCCCCCccCCCHHHHHHHHH--hCCCEEE
Q psy3185 247 IFNILKPGGI-WINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQ--GLGFVYE 295 (298)
Q Consensus 247 I~~~LkpGG~-~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~--~~GF~i~ 295 (298)
+.++|||||+ ++..-| .-..+++.++++ +.||..+
T Consensus 150 ~~~~LkpgG~l~~~~~~--------------~~~~~~~~~~l~~~~~gf~~~ 187 (215)
T 4dzr_A 150 PPYVLARGRAGVFLEVG--------------HNQADEVARLFAPWRERGFRV 187 (215)
T ss_dssp CGGGBCSSSEEEEEECT--------------TSCHHHHHHHTGGGGGGTEEC
T ss_pred HHHHhcCCCeEEEEEEC--------------CccHHHHHHHHHHhhcCCceE
Confidence 9999999999 443222 113688889998 8898654
No 145
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.44 E-value=9.5e-13 Score=123.12 Aligned_cols=143 Identities=10% Similarity=0.103 Sum_probs=99.8
Q ss_pred HHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccc
Q psy3185 106 EILARFPPETINPKDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNI 183 (298)
Q Consensus 106 ~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~ 183 (298)
.+.+.++. .+..+|||+|||+|.++..++++. ..++++|.+. |+. +. +...
T Consensus 175 ~~~~~~~~----~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~~---~~~~----------------- 227 (348)
T 3lst_A 175 ILARAGDF----PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--RH---RLDA----------------- 227 (348)
T ss_dssp HHHHHSCC----CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--TC---CCCC-----------------
T ss_pred HHHHhCCc----cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--cc---cccc-----------------
Confidence 44555543 246799999999999999999874 4689999954 433 11 0000
Q ss_pred cccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchH--HHHHHHHHHhccCCeEEEEec
Q psy3185 184 LTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNI--VSFIETIFNILKPGGIWINLG 261 (298)
Q Consensus 184 ~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~--~~yl~~I~~~LkpGG~~In~g 261 (298)
.....++.+..+||.+.. + +||+|++...+++.++. ...+++++++|||||.++...
T Consensus 228 ------------------~~~~~~v~~~~~d~~~~~--p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 228 ------------------PDVAGRWKVVEGDFLREV--P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp ------------------GGGTTSEEEEECCTTTCC--C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred ------------------cCCCCCeEEEecCCCCCC--C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 000147899999996332 2 89999999988877665 799999999999999998654
Q ss_pred cccccccCC-----------CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 262 PLLYHYSNM-----------LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 262 Pl~y~~~~~-----------~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
+..-..... ......+.|.+|+.++++++||++++
T Consensus 287 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 332 (348)
T 3lst_A 287 AVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDR 332 (348)
T ss_dssp CCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred eccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEE
Confidence 321110000 01133467999999999999999875
No 146
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.43 E-value=4.8e-13 Score=126.25 Aligned_cols=140 Identities=14% Similarity=0.061 Sum_probs=100.1
Q ss_pred HHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 105 SEILARFPPETINPKDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 105 ~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
..+.+.++.- .+..+|||+|||+|.++..+++++ ..++++|+ +.|+..++.
T Consensus 198 ~~l~~~~~~~---~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~----------------------- 250 (372)
T 1fp1_D 198 KRMLEIYTGF---EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP----------------------- 250 (372)
T ss_dssp HHHHHHCCTT---TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------------------
T ss_pred HHHHHHhhcc---CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh-----------------------
Confidence 4455555411 245799999999999999999985 46888899 888753221
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHH--HHHHHHHHhccCCeEEEEe
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIV--SFIETIFNILKPGGIWINL 260 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~--~yl~~I~~~LkpGG~~In~ 260 (298)
..++.+..+||.+ ..+ . ||+|++...+++.++.. ..+++++++|||||.++..
T Consensus 251 ----------------------~~~v~~~~~d~~~-~~~-~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 251 ----------------------LSGIEHVGGDMFA-SVP-Q-GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp ----------------------CTTEEEEECCTTT-CCC-C-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----------------------cCCCEEEeCCccc-CCC-C-CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 0258899999977 333 3 99999999998777665 9999999999999998854
Q ss_pred ccccccccCCC---------------CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 261 GPLLYHYSNML---------------NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 261 gPl~y~~~~~~---------------~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.+..-.....+ .....+.+.+|+.++++++||++++
T Consensus 306 e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 356 (372)
T 1fp1_D 306 EFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQ 356 (372)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEE
T ss_pred EeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEE
Confidence 32210000000 0013456999999999999999875
No 147
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.43 E-value=1.8e-12 Score=121.29 Aligned_cols=137 Identities=21% Similarity=0.184 Sum_probs=100.7
Q ss_pred CCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+++.+ ..++++|+ +.|+..++..+...
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-------------------------------- 229 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE-------------------------------- 229 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT--------------------------------
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc--------------------------------
Confidence 46799999999999999999885 57899999 99999887633210
Q ss_pred CCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchH--HHHHHHHHHhccCCeEEEEeccc-cccccCC---
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNI--VSFIETIFNILKPGGIWINLGPL-LYHYSNM--- 270 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~--~~yl~~I~~~LkpGG~~In~gPl-~y~~~~~--- 270 (298)
.+ ..++.+..+|+.+.. +..||+|++...++...+. ..++++++++|||||.++...+. .-.....
T Consensus 230 ----~~--~~~v~~~~~d~~~~~--~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~ 301 (360)
T 1tw3_A 230 ----GL--SDRVDVVEGDFFEPL--PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQF 301 (360)
T ss_dssp ----TC--TTTEEEEECCTTSCC--SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHH
T ss_pred ----CC--CCceEEEeCCCCCCC--CCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchh
Confidence 00 137889999987632 2359999998888765544 68999999999999998865443 1100000
Q ss_pred --------CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 271 --------LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 271 --------~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.......++.+|+.++++++||++++
T Consensus 302 ~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (360)
T 1tw3_A 302 TELDLRMLVFLGGALRTREKWDGLAASAGLVVEE 335 (360)
T ss_dssp HHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred hhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEE
Confidence 00023457999999999999999875
No 148
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.43 E-value=1.9e-12 Score=122.26 Aligned_cols=140 Identities=13% Similarity=0.132 Sum_probs=100.7
Q ss_pred HHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 105 SEILARFPPETINPKDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 105 ~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
..+...++.- .+..+|||+|||+|.++..|+++ +..++++|+ +.|+..++.
T Consensus 190 ~~~~~~~~~~---~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------------------- 242 (364)
T 3p9c_A 190 KKLLELYHGF---EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------------------- 242 (364)
T ss_dssp HHHHHHCCTT---TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------------------
T ss_pred HHHHHhcccc---cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh-----------------------
Confidence 4455555511 24679999999999999999986 467999999 777643210
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCc--chHHHHHHHHHHhccCCeEEEEe
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~In~ 260 (298)
..++.++.|||.+ +.+.+ |+|++.+.++.. ++....|++++++|||||.++..
T Consensus 243 ----------------------~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 243 ----------------------FPGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp ----------------------CTTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred ----------------------cCCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 1378899999987 43343 999999888733 56778999999999999999754
Q ss_pred ccccccccCC----------------CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 261 GPLLYHYSNM----------------LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 261 gPl~y~~~~~----------------~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.++.-..... ......+.|.+|+.++++++||++++
T Consensus 298 e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~ 349 (364)
T 3p9c_A 298 QCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVK 349 (364)
T ss_dssp ECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEE
T ss_pred EeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEE
Confidence 3321100000 01134568899999999999999875
No 149
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.43 E-value=2.9e-13 Score=124.48 Aligned_cols=134 Identities=15% Similarity=0.142 Sum_probs=84.7
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||||.++..|+++|. .|+|+|+|+.||..+.. .... +.. +
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r---~~~r---------v~~---------------~--- 134 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLR---QDDR---------VRS---------------M--- 134 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHH---TCTT---------EEE---------------E---
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHH---hCcc---------cce---------------e---
Confidence 467999999999999999999986 79999999999976432 1000 000 0
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe-ccccccccCC--C--C
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL-GPLLYHYSNM--L--N 272 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~-gPl~y~~~~~--~--~ 272 (298)
...++... ++..+ +..+||.|++...+. ++...+.+++++|||||.++.+ .|- |..... . +
T Consensus 135 ------~~~ni~~l--~~~~l--~~~~fD~v~~d~sf~---sl~~vL~e~~rvLkpGG~lv~lvkPq-fe~~~~~~~~~G 200 (291)
T 3hp7_A 135 ------EQYNFRYA--EPVDF--TEGLPSFASIDVSFI---SLNLILPALAKILVDGGQVVALVKPQ-FEAGREQIGKNG 200 (291)
T ss_dssp ------CSCCGGGC--CGGGC--TTCCCSEEEECCSSS---CGGGTHHHHHHHSCTTCEEEEEECGG-GTSCGGGCC-CC
T ss_pred ------cccCceec--chhhC--CCCCCCEEEEEeeHh---hHHHHHHHHHHHcCcCCEEEEEECcc-cccChhhcCCCC
Confidence 00011111 11111 234599877644322 3467899999999999999753 442 211100 0 0
Q ss_pred ----CCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 273 ----EDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 273 ----~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
......+.+++.+++..+||.+..
T Consensus 201 ~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 201 IVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 011235789999999999999864
No 150
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.43 E-value=4.3e-13 Score=118.03 Aligned_cols=131 Identities=11% Similarity=-0.012 Sum_probs=87.7
Q ss_pred CCCeEEEecccCcHHHHHHHHc-C--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-G--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..|++. | ..|+|+|+|+.|+..+......
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-------------------------------- 124 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-------------------------------- 124 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--------------------------------
Confidence 4679999999999999999987 3 6899999999988765442111
Q ss_pred CCCCCCCCCCCCeeEEecccccc---ccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCC
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQV---YVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLN 272 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~---~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~ 272 (298)
..++.+..+|+.+. ...+++||+|++... .......++.++.++|||||+++..-+- ...+. .
T Consensus 125 ---------~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~--~~~~~-~ 190 (233)
T 2ipx_A 125 ---------RTNIIPVIEDARHPHKYRMLIAMVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISIKA--NCIDS-T 190 (233)
T ss_dssp ---------CTTEEEECSCTTCGGGGGGGCCCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEH--HHHCS-S
T ss_pred ---------cCCeEEEEcccCChhhhcccCCcEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEcc--ccccc-C
Confidence 02577888888763 234679999998543 2233356788999999999998742110 00000 0
Q ss_pred CCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 273 EDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 273 ~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.+....-.++ .+++++.||+++.
T Consensus 191 ~~~~~~~~~~-~~~l~~~Gf~~~~ 213 (233)
T 2ipx_A 191 ASAEAVFASE-VKKMQQENMKPQE 213 (233)
T ss_dssp SCHHHHHHHH-HHTTGGGTEEEEE
T ss_pred CCHHHHHHHH-HHHHHHCCCceEE
Confidence 0000111233 5888899999875
No 151
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.43 E-value=5e-13 Score=112.23 Aligned_cols=103 Identities=18% Similarity=0.070 Sum_probs=76.7
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..++++|. .|+|+|+|+.|+..++......
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------------- 77 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMT--------------------------------- 77 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTT---------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc---------------------------------
Confidence 467999999999999999999974 8999999999999888633210
Q ss_pred CCCCCCCCCCeeEEeccccccc-cCCCceeEEEecccccCcchHHHHHHHHH--HhccCCeEEEEe
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFFIDCANNIVSFIETIF--NILKPGGIWINL 260 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ffidta~n~~~yl~~I~--~~LkpGG~~In~ 260 (298)
.+ ..++.+..+|+.+.. ..+++||+|++..... .....+.++.+. ++|||||+++..
T Consensus 78 ---~~--~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~ 137 (177)
T 2esr_A 78 ---KA--ENRFTLLKMEAERAIDCLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCE 137 (177)
T ss_dssp ---TC--GGGEEEECSCHHHHHHHBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred ---CC--CCceEEEECcHHHhHHhhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEE
Confidence 00 136788999988742 2356799998863221 134556677776 999999999743
No 152
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.43 E-value=7.9e-13 Score=117.67 Aligned_cols=109 Identities=12% Similarity=0.089 Sum_probs=78.5
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..||+. +..|+|+|+|..|+..|+..+.......
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~---------------------------- 97 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAP---------------------------- 97 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHST----------------------------
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHH----------------------------
Confidence 4578999999999999999988 4689999999999998876432211000
Q ss_pred CCCCCCCCCCCeeEEeccccc-cc--cCCCceeEEEecccccCcch--------HHHHHHHHHHhccCCeEEEEe
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQ-VY--VHPNKWDCVATCFFIDCANN--------IVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~-~~--~~~~~fD~V~t~ffidta~n--------~~~yl~~I~~~LkpGG~~In~ 260 (298)
. ....++.++.+|+.+ +. .++++||.|+.+|--.+... ...+++.++++|||||.++..
T Consensus 98 --~---~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 98 --A---GGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp --T---CCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred --h---cCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 0 001478899999886 43 45789999987653211110 147999999999999999754
No 153
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.42 E-value=1.3e-12 Score=119.04 Aligned_cols=151 Identities=7% Similarity=0.020 Sum_probs=97.3
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeC-CHHHHHHHHHHHhhhh-hccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEF-SLFMLFASNFILNKCR-EKNVYKIYPWVQQT 179 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~-S~~Ml~~a~~~l~~~~-~~~~~~i~p~~~~~ 179 (298)
+.+.+...... .++.+|||+|||+|.++..+++.|. .|+|+|+ |+.|+..++....... ..+.
T Consensus 67 l~~~l~~~~~~----~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~---------- 132 (281)
T 3bzb_A 67 LADTLCWQPEL----IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCS---------- 132 (281)
T ss_dssp HHHHHHHCGGG----TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC--------------
T ss_pred HHHHHHhcchh----cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcc----------
Confidence 55566554321 2356999999999999999999998 8999999 8999998876321000 0000
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccc----ccc--CCCceeEEEecccccCcchHHHHHHHHHHhcc-
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQ----VYV--HPNKWDCVATCFFIDCANNIVSFIETIFNILK- 252 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~----~~~--~~~~fD~V~t~ffidta~n~~~yl~~I~~~Lk- 252 (298)
+.. +...++.+...|..+ +.. .+++||+|+++..+.+.++...+++++.++||
T Consensus 133 ------------~~~--------~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~ 192 (281)
T 3bzb_A 133 ------------SET--------VKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLAL 192 (281)
T ss_dssp --------------------------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCC
T ss_pred ------------ccc--------CCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcc
Confidence 000 001245555333222 211 35789999988877778889999999999999
Q ss_pred --C--CeEEEE-eccccccccCCCCCCccCCCHHHHHHHHHhCC-CEEEE
Q psy3185 253 --P--GGIWIN-LGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLG-FVYEV 296 (298)
Q Consensus 253 --p--GG~~In-~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~G-F~i~~ 296 (298)
| ||.++. +.|.. +.+.-..+++.+.+++.| |+++.
T Consensus 193 ~~p~~gG~l~v~~~~~~---------~~~~~~~~~~~~~l~~~G~f~v~~ 233 (281)
T 3bzb_A 193 PANDPTAVALVTFTHHR---------PHLAERDLAFFRLVNADGALIAEP 233 (281)
T ss_dssp TTTCTTCEEEEEECC-----------------CTHHHHHHHHSTTEEEEE
T ss_pred cCCCCCCEEEEEEEeee---------cccchhHHHHHHHHHhcCCEEEEE
Confidence 9 997543 33310 111222467788888999 99875
No 154
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.42 E-value=9.7e-13 Score=118.49 Aligned_cols=119 Identities=13% Similarity=0.115 Sum_probs=90.0
Q ss_pred hhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccc
Q psy3185 99 CYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPW 175 (298)
Q Consensus 99 ~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~ 175 (298)
.|...+..+...+.. .++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++..+.....
T Consensus 83 ~~~~~~~~i~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g--------- 149 (280)
T 1i9g_A 83 IYPKDAAQIVHEGDI----FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYG--------- 149 (280)
T ss_dssp CCHHHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHT---------
T ss_pred ecHHHHHHHHHHcCC----CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---------
Confidence 456566666666542 34679999999999999999986 67899999999999988764321000
Q ss_pred cccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCe
Q psy3185 176 VQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGG 255 (298)
Q Consensus 176 ~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG 255 (298)
. + ..++.+..+|+.+...++++||+|++.. .+...+++.+.++|||||
T Consensus 150 --------------------~-----~--~~~v~~~~~d~~~~~~~~~~~D~v~~~~-----~~~~~~l~~~~~~L~pgG 197 (280)
T 1i9g_A 150 --------------------Q-----P--PDNWRLVVSDLADSELPDGSVDRAVLDM-----LAPWEVLDAVSRLLVAGG 197 (280)
T ss_dssp --------------------S-----C--CTTEEEECSCGGGCCCCTTCEEEEEEES-----SCGGGGHHHHHHHEEEEE
T ss_pred --------------------C-----C--CCcEEEEECchHhcCCCCCceeEEEECC-----cCHHHHHHHHHHhCCCCC
Confidence 0 0 1367889999988765578999998732 345588999999999999
Q ss_pred EEEEecc
Q psy3185 256 IWINLGP 262 (298)
Q Consensus 256 ~~In~gP 262 (298)
.++...|
T Consensus 198 ~l~~~~~ 204 (280)
T 1i9g_A 198 VLMVYVA 204 (280)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9987655
No 155
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.42 E-value=3.4e-12 Score=113.62 Aligned_cols=133 Identities=13% Similarity=0.162 Sum_probs=103.0
Q ss_pred HHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC--eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 104 ISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY--VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 104 ~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~--~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
+..+.++++ ++.+|||+|||+|.++..+|+.|. .|+|+|+|+.|+..|+.-....
T Consensus 12 L~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~----------------- 68 (230)
T 3lec_A 12 LQKVANYVP------KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH----------------- 68 (230)
T ss_dssp HHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHhCC------CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 456677665 357999999999999999999984 5999999999999998733210
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEec
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLG 261 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~g 261 (298)
.+ ..++.+..||..+...+.++||+|+.+-.. ..-+.+.++...+.|+++|.+| +.
T Consensus 69 -------------------gl--~~~I~~~~gD~l~~~~~~~~~D~IviaGmG--g~lI~~IL~~~~~~l~~~~~lI-lq 124 (230)
T 3lec_A 69 -------------------GL--TSKIDVRLANGLSAFEEADNIDTITICGMG--GRLIADILNNDIDKLQHVKTLV-LQ 124 (230)
T ss_dssp -------------------TC--TTTEEEEECSGGGGCCGGGCCCEEEEEEEC--HHHHHHHHHHTGGGGTTCCEEE-EE
T ss_pred -------------------CC--CCcEEEEECchhhccccccccCEEEEeCCc--hHHHHHHHHHHHHHhCcCCEEE-EE
Confidence 01 136889999988876544579988765432 3457788999999999999888 44
Q ss_pred cccccccCCCCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 262 PLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 262 Pl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
|. ...+++++++.+.||.+++|
T Consensus 125 p~--------------~~~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 125 PN--------------NREDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp ES--------------SCHHHHHHHHHHTTEEEEEE
T ss_pred CC--------------CChHHHHHHHHHCCCEEEEE
Confidence 42 12889999999999999886
No 156
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.42 E-value=3.9e-12 Score=112.87 Aligned_cols=133 Identities=14% Similarity=0.101 Sum_probs=101.1
Q ss_pred HHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC--eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 104 ISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY--VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 104 ~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~--~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
+..+.++++ ++.+|||+|||+|.++..+|+.|. .|+|+|+|+.++..|+.-....
T Consensus 6 L~~l~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~----------------- 62 (225)
T 3kr9_A 6 LELVASFVS------QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH----------------- 62 (225)
T ss_dssp HHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHhCC------CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 456666665 357999999999999999999974 5999999999999988732210
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEec
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLG 261 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~g 261 (298)
.+ ..++.+..||..+...+.++||+|+.+-. ...-+.+.++...+.|+|||.+| +.
T Consensus 63 -------------------gl--~~~i~~~~~d~l~~l~~~~~~D~IviaG~--Gg~~i~~Il~~~~~~L~~~~~lV-lq 118 (225)
T 3kr9_A 63 -------------------GL--KEKIQVRLANGLAAFEETDQVSVITIAGM--GGRLIARILEEGLGKLANVERLI-LQ 118 (225)
T ss_dssp -------------------TC--TTTEEEEECSGGGGCCGGGCCCEEEEEEE--CHHHHHHHHHHTGGGCTTCCEEE-EE
T ss_pred -------------------CC--CceEEEEECchhhhcccCcCCCEEEEcCC--ChHHHHHHHHHHHHHhCCCCEEE-EE
Confidence 01 13688999998665433337998887643 23346788999999999999888 34
Q ss_pred cccccccCCCCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 262 PLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 262 Pl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
|. -..+.+++++.+.||.++.|
T Consensus 119 ~~--------------~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 119 PN--------------NREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp ES--------------SCHHHHHHHHHHTTEEEEEE
T ss_pred CC--------------CCHHHHHHHHHHCCCEEEEE
Confidence 43 13789999999999999876
No 157
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.42 E-value=1.6e-12 Score=112.40 Aligned_cols=108 Identities=18% Similarity=0.058 Sum_probs=82.6
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcC---CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRG---YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G---~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
+...+.+.+.. .++.+|||+|||+|.++..+++.+ ..|+|+|.|+.|+..++..+....
T Consensus 65 ~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------------- 126 (215)
T 2yxe_A 65 MVGMMCELLDL----KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG-------------- 126 (215)
T ss_dssp HHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT--------------
T ss_pred HHHHHHHhhCC----CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC--------------
Confidence 45555555542 246799999999999999999986 789999999999998887432200
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
..++.+..+|+.......++||+|++...+++.. +.+.++|||||.++.
T Consensus 127 -------------------------~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~ 175 (215)
T 2yxe_A 127 -------------------------YDNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLM 175 (215)
T ss_dssp -------------------------CTTEEEEESCGGGCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEE
T ss_pred -------------------------CCCeEEEECCcccCCCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEE
Confidence 0257788888865544467899999988887665 488999999999874
No 158
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.42 E-value=2.4e-12 Score=116.30 Aligned_cols=133 Identities=17% Similarity=0.109 Sum_probs=98.1
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
-...+...+.. .++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++..+...
T Consensus 100 ~~~~i~~~~~~----~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------- 160 (277)
T 1o54_A 100 DSSFIAMMLDV----KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW--------------- 160 (277)
T ss_dssp HHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHHhCC----CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc---------------
Confidence 33444444432 34679999999999999999988 468999999999999888643210
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.+ ..++.+..+|+.+. .++++||+|++. .++...+++.+.++|||||.++.
T Consensus 161 ---------------------~~--~~~v~~~~~d~~~~-~~~~~~D~V~~~-----~~~~~~~l~~~~~~L~pgG~l~~ 211 (277)
T 1o54_A 161 ---------------------GL--IERVTIKVRDISEG-FDEKDVDALFLD-----VPDPWNYIDKCWEALKGGGRFAT 211 (277)
T ss_dssp ---------------------TC--GGGEEEECCCGGGC-CSCCSEEEEEEC-----CSCGGGTHHHHHHHEEEEEEEEE
T ss_pred ---------------------CC--CCCEEEEECCHHHc-ccCCccCEEEEC-----CcCHHHHHHHHHHHcCCCCEEEE
Confidence 00 02677888998877 345789999873 34556889999999999999987
Q ss_pred eccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 260 LGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 260 ~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
..|... ..+++.+.+++.||..+.
T Consensus 212 ~~~~~~-------------~~~~~~~~l~~~gf~~~~ 235 (277)
T 1o54_A 212 VCPTTN-------------QVQETLKKLQELPFIRIE 235 (277)
T ss_dssp EESSHH-------------HHHHHHHHHHHSSEEEEE
T ss_pred EeCCHH-------------HHHHHHHHHHHCCCceeE
Confidence 655211 146778888889998764
No 159
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.42 E-value=8.3e-13 Score=116.61 Aligned_cols=101 Identities=18% Similarity=0.200 Sum_probs=80.6
Q ss_pred CCeEEEecccCcHHHHHHHH--cCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIAR--RGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~--~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
+.+|||+|||+|..+..+|+ .+..|+|+|+|+.|+..++..+...
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------------- 118 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY--------------------------------- 118 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT---------------------------------
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc---------------------------------
Confidence 57999999999999999999 4678999999999999988744321
Q ss_pred CCCCCCCCCCeeEEecccccccc--CCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEec
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV--HPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLG 261 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~--~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~g 261 (298)
.+ ..++.+..+|+.+... .+++||+|++.. ...+...+++.+.++|||||+++.-.
T Consensus 119 ---~~--~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~---~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 119 ---HF--ENQVRIIEGNALEQFENVNDKVYDMIFIDA---AKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp ---TC--TTTEEEEESCGGGCHHHHTTSCEEEEEEET---TSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ---CC--CCcEEEEECCHHHHHHhhccCCccEEEEcC---cHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 01 1378899999987643 268999998543 35567889999999999999998533
No 160
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.41 E-value=1.8e-12 Score=114.27 Aligned_cols=120 Identities=9% Similarity=0.127 Sum_probs=89.0
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
.++..|....+. .++.+|||+|||+|..+..+|+. +..|+++|.|+.|+..++..+....
T Consensus 43 ~~l~~l~~~~~~----~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g------------- 105 (221)
T 3dr5_A 43 QLLTTLAATTNG----NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG------------- 105 (221)
T ss_dssp HHHHHHHHHSCC----TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT-------------
T ss_pred HHHHHHHHhhCC----CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-------------
Confidence 366666665542 23559999999999999999985 6789999999999999887443210
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccC--CCceeEEEecccccCcchHHHHHHHHHHhccCCeE
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVH--PNKWDCVATCFFIDCANNIVSFIETIFNILKPGGI 256 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~--~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~ 256 (298)
+. ..++.+..||+.++... +++||+|+... ...+...|++.+.++|||||+
T Consensus 106 -----------------------~~-~~~i~~~~gda~~~l~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~ 158 (221)
T 3dr5_A 106 -----------------------YS-PSRVRFLLSRPLDVMSRLANDSYQLVFGQV---SPMDLKALVDAAWPLLRRGGA 158 (221)
T ss_dssp -----------------------CC-GGGEEEECSCHHHHGGGSCTTCEEEEEECC---CTTTHHHHHHHHHHHEEEEEE
T ss_pred -----------------------CC-cCcEEEEEcCHHHHHHHhcCCCcCeEEEcC---cHHHHHHHHHHHHHHcCCCcE
Confidence 00 03788999998876532 58999996543 345677899999999999999
Q ss_pred EEEecccccc
Q psy3185 257 WINLGPLLYH 266 (298)
Q Consensus 257 ~In~gPl~y~ 266 (298)
++. .-.+|+
T Consensus 159 lv~-dn~~~~ 167 (221)
T 3dr5_A 159 LVL-ADALLD 167 (221)
T ss_dssp EEE-TTTTGG
T ss_pred EEE-eCCCCC
Confidence 984 334454
No 161
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.41 E-value=1e-12 Score=124.97 Aligned_cols=119 Identities=20% Similarity=0.224 Sum_probs=89.7
Q ss_pred hHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccc
Q psy3185 93 SEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYK 171 (298)
Q Consensus 93 ~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~ 171 (298)
+..|...|..-+..-...++ +..|||+|||+|-|+...|+.|. .|+|+|.|+ |+..|+.+... |
T Consensus 64 D~~Rt~aY~~Ai~~~~~~~~-------~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~----n--- 128 (376)
T 4hc4_A 64 DRVRTDAYRLGILRNWAALR-------GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRF----N--- 128 (376)
T ss_dssp CHHHHHHHHHHHHTTHHHHT-------TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHH----T---
T ss_pred CHHHHHHHHHHHHhCHHhcC-------CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHH----c---
Confidence 34666667654432222332 56899999999999999999997 599999995 88888775432 0
Q ss_pred cccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEe---cccccCcchHHHHHHHHH
Q psy3185 172 IYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVAT---CFFIDCANNIVSFIETIF 248 (298)
Q Consensus 172 i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t---~ffidta~n~~~yl~~I~ 248 (298)
.+ ...+.++.||..++.. ++++|+|+| .+++.....+..++....
T Consensus 129 -----------------------------~~--~~~i~~i~~~~~~~~l-pe~~DvivsE~~~~~l~~e~~l~~~l~a~~ 176 (376)
T 4hc4_A 129 -----------------------------GL--EDRVHVLPGPVETVEL-PEQVDAIVSEWMGYGLLHESMLSSVLHART 176 (376)
T ss_dssp -----------------------------TC--TTTEEEEESCTTTCCC-SSCEEEEECCCCBTTBTTTCSHHHHHHHHH
T ss_pred -----------------------------CC--CceEEEEeeeeeeecC-CccccEEEeecccccccccchhhhHHHHHH
Confidence 01 1468899999988754 479999998 355666667889999999
Q ss_pred HhccCCeEEE
Q psy3185 249 NILKPGGIWI 258 (298)
Q Consensus 249 ~~LkpGG~~I 258 (298)
++|||||.+|
T Consensus 177 r~Lkp~G~~i 186 (376)
T 4hc4_A 177 KWLKEGGLLL 186 (376)
T ss_dssp HHEEEEEEEE
T ss_pred hhCCCCceEC
Confidence 9999999987
No 162
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.41 E-value=2.7e-12 Score=111.77 Aligned_cols=103 Identities=17% Similarity=0.095 Sum_probs=80.6
Q ss_pred CCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
+.+|||+|||+|..+..+|+. +..|+|+|.|+.|+..++..+...
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------- 106 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA-------------------------------- 106 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 579999999999999999998 789999999999999888743321
Q ss_pred CCCCCCCCCCCeeEEeccccccccC-----CCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccc
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVH-----PNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPL 263 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~-----~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl 263 (298)
.+ ..++.+..||+.+.... .++||+|+.... ..+...+++.+.++|||||+++.-.++
T Consensus 107 ----~~--~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 107 ----NL--NDRVEVRTGLALDSLQQIENEKYEPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp ----TC--TTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred ----CC--CCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 00 13688999998765321 267999976432 456778999999999999988865554
No 163
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.41 E-value=7.3e-13 Score=124.00 Aligned_cols=129 Identities=13% Similarity=0.082 Sum_probs=96.0
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
+..+|||+|||+|.++..++++ +.+++|+|+ +.|+..++.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------------------------------- 229 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------------------------------------- 229 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------------------------------------
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc-------------------------------------
Confidence 3579999999999999999987 578999999 988754321
Q ss_pred CCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHH--HHHHHHHHhccC---CeEEEEecccccccc---
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIV--SFIETIFNILKP---GGIWINLGPLLYHYS--- 268 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~--~yl~~I~~~Lkp---GG~~In~gPl~y~~~--- 268 (298)
..++.+..+|+.+ ..+ .||+|++.+.+++..+.. ..+++++++||| ||.++...+..-...
T Consensus 230 --------~~~v~~~~~d~~~-~~p--~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~ 298 (352)
T 1fp2_A 230 --------SNNLTYVGGDMFT-SIP--NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDEN 298 (352)
T ss_dssp --------BTTEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCH
T ss_pred --------CCCcEEEeccccC-CCC--CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCcc
Confidence 0247889999976 222 399999999888776665 999999999999 999875433211000
Q ss_pred ---------CC--CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 269 ---------NM--LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 269 ---------~~--~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
+. ......+.+.+|+.++++++||++++
T Consensus 299 ~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 337 (352)
T 1fp2_A 299 QVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYK 337 (352)
T ss_dssp HHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEE
T ss_pred chhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeE
Confidence 00 00013457899999999999999875
No 164
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.40 E-value=3.7e-12 Score=113.69 Aligned_cols=102 Identities=17% Similarity=0.049 Sum_probs=80.5
Q ss_pred CCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
+.+|||+|||+|..+..+|+. +..|+|+|+|+.|+..++..+...
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------------------------- 111 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA-------------------------------- 111 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 569999999999999999998 789999999999999988744321
Q ss_pred CCCCCCCCCCCeeEEecccccccc---CCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEecc
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYV---HPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGP 262 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~---~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gP 262 (298)
.+ ..++.+..||+.+... ..++||+|+... ...+...|++.+.++|||||++|.-..
T Consensus 112 ----g~--~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 112 ----GV--DQRVTLREGPALQSLESLGECPAFDLIFIDA---DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ----TC--TTTEEEEESCHHHHHHTCCSCCCCSEEEECS---CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ----CC--CCcEEEEEcCHHHHHHhcCCCCCeEEEEECC---chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 01 1378899999877432 235999998643 355678899999999999999885443
No 165
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.40 E-value=1.7e-12 Score=121.76 Aligned_cols=100 Identities=21% Similarity=0.211 Sum_probs=78.6
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+|+.|. .|+|+|.|+ |+..++......
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~--------------------------------- 95 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSN--------------------------------- 95 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHT---------------------------------
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHc---------------------------------
Confidence 467999999999999999999986 899999995 988777643320
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEeccccc--CcchHHHHHHHHHHhccCCeEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFID--CANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffid--ta~n~~~yl~~I~~~LkpGG~~I 258 (298)
.+ ..++.+..+|+.++.. +++||+|++..+.. ..+++...+..+.++|||||+++
T Consensus 96 ---~l--~~~v~~~~~d~~~~~~-~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 96 ---NL--TDRIVVIPGKVEEVSL-PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp ---TC--TTTEEEEESCTTTCCC-SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEE
T ss_pred ---CC--CCcEEEEEcchhhCCC-CCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEE
Confidence 01 1368899999988753 47899999875433 23557788889999999999997
No 166
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.39 E-value=2.1e-12 Score=119.44 Aligned_cols=108 Identities=19% Similarity=0.143 Sum_probs=83.8
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCe---EEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYV---CQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~---v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
+++.+.+.+.. .++.+|||+|||+|.++..+|+.+.. |+|+|+|+.|+..++..+...
T Consensus 63 ~~~~l~~~l~~----~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------- 123 (317)
T 1dl5_A 63 LMALFMEWVGL----DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL--------------- 123 (317)
T ss_dssp HHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHhcCC----CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc---------------
Confidence 45555555542 24679999999999999999998765 999999999999888743210
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.+ .++.+..+|+.+.....++||+|++...++... +.+.++|||||+++.
T Consensus 124 ---------------------g~---~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi 173 (317)
T 1dl5_A 124 ---------------------GI---ENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIV 173 (317)
T ss_dssp ---------------------TC---CSEEEEESCGGGCCGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEE
T ss_pred ---------------------CC---CCeEEEECChhhccccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEE
Confidence 00 257889999988655568999999998887665 578899999999864
No 167
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.39 E-value=2.4e-12 Score=120.38 Aligned_cols=128 Identities=15% Similarity=0.101 Sum_probs=92.4
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|.++..+|+.|..|+|+|+|+.|+..++......
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~----------------------------------- 198 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLA----------------------------------- 198 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHH-----------------------------------
T ss_pred CCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc-----------------------------------
Confidence 569999999999999999999999999999999999887632210
Q ss_pred CCCCCCCCeeEEeccccccccC----CCceeEEEec---cccc-------CcchHHHHHHHHHHhccCCeEEEEeccccc
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYVH----PNKWDCVATC---FFID-------CANNIVSFIETIFNILKPGGIWINLGPLLY 265 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~~----~~~fD~V~t~---ffid-------ta~n~~~yl~~I~~~LkpGG~~In~gPl~y 265 (298)
.+. ..++.++.+|+.++... .++||+|++. |... ...+...+++.+.++|||||+++....
T Consensus 199 -gl~-~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~--- 273 (332)
T 2igt_A 199 -GLE-QAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA--- 273 (332)
T ss_dssp -TCT-TSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE---
T ss_pred -CCC-ccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC---
Confidence 000 01478999998876432 5789999883 3322 234567899999999999998653211
Q ss_pred cccCCCCCCccCCCHHHHHHHHH----hCCCEEE
Q psy3185 266 HYSNMLNEDSIEPSYEVVKQVIQ----GLGFVYE 295 (298)
Q Consensus 266 ~~~~~~~~~~~~ls~eEl~~~~~----~~GF~i~ 295 (298)
.+..++.+++..++. +.|+++.
T Consensus 274 --------~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 274 --------YSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp --------CCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred --------CCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 123345666666665 7888875
No 168
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.39 E-value=8.6e-13 Score=131.67 Aligned_cols=97 Identities=14% Similarity=0.190 Sum_probs=75.5
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||.|.++..||++|++|+|+|.|+.|+..|+. ++.+.
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~---~a~~~-------------------------------- 111 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRA---LAEEN-------------------------------- 111 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHHTS--------------------------------
T ss_pred CCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHH---HHHhc--------------------------------
Confidence 5799999999999999999999999999999999999986 32210
Q ss_pred CCCCCCCCeeEEeccccccc--cCCCceeEEEecccccCcchHH--HHHHHHHHhccCCe
Q psy3185 200 SDYNDDCDFSMAAGDFLQVY--VHPNKWDCVATCFFIDCANNIV--SFIETIFNILKPGG 255 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~--~~~~~fD~V~t~ffidta~n~~--~yl~~I~~~LkpGG 255 (298)
...++.+..++..++. .++++||+|++.-++++.++.. ..+..+.+.|+++|
T Consensus 112 ----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~ 167 (569)
T 4azs_A 112 ----PDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVT 167 (569)
T ss_dssp ----TTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHS
T ss_pred ----CCCceEEEECCHHHHhhhccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhcccc
Confidence 0136889999988873 3568999999998888877654 23444555566554
No 169
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.39 E-value=6.3e-12 Score=112.80 Aligned_cols=133 Identities=12% Similarity=0.047 Sum_probs=101.7
Q ss_pred HHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC--eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 104 ISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY--VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 104 ~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~--~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
+..+.++++ ++.+|||+|||+|.++..+|+.|. .|+|+|+|+.|+..|+.-....
T Consensus 12 L~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~----------------- 68 (244)
T 3gnl_A 12 LEKVASYIT------KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS----------------- 68 (244)
T ss_dssp HHHHHTTCC------SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHhCC------CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 456677665 357999999999999999999984 5999999999999998732210
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEec
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLG 261 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~g 261 (298)
.+ ..++.+..||..+...+.++||+|+++-.- ..-+.+.++...+.|+++|.+| +.
T Consensus 69 -------------------gl--~~~I~v~~gD~l~~~~~~~~~D~IviagmG--g~lI~~IL~~~~~~L~~~~~lI-lq 124 (244)
T 3gnl_A 69 -------------------GL--TEQIDVRKGNGLAVIEKKDAIDTIVIAGMG--GTLIRTILEEGAAKLAGVTKLI-LQ 124 (244)
T ss_dssp -------------------TC--TTTEEEEECSGGGGCCGGGCCCEEEEEEEC--HHHHHHHHHHTGGGGTTCCEEE-EE
T ss_pred -------------------CC--CceEEEEecchhhccCccccccEEEEeCCc--hHHHHHHHHHHHHHhCCCCEEE-EE
Confidence 00 136889999988876443469998865322 2457788999999999999888 44
Q ss_pred cccccccCCCCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 262 PLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 262 Pl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
|.. ..+++++++.+.||.+++|
T Consensus 125 ~~~--------------~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 125 PNI--------------AAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp ESS--------------CHHHHHHHHHHHTEEEEEE
T ss_pred cCC--------------ChHHHHHHHHHCCCEEEEE
Confidence 421 2789999999999999776
No 170
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.38 E-value=2.8e-12 Score=111.69 Aligned_cols=112 Identities=9% Similarity=0.019 Sum_probs=84.6
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
++..+....+ +.+|||+|||+|..+..+|+. +..|+|+|.|+.|+..++..+...
T Consensus 55 ~l~~l~~~~~-------~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------- 112 (225)
T 3tr6_A 55 LLALLVKLMQ-------AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA--------------- 112 (225)
T ss_dssp HHHHHHHHHT-------CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHhhC-------CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC---------------
Confidence 5555554433 469999999999999999997 789999999999999988744321
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccccC--C----CceeEEEecccccCcchHHHHHHHHHHhccC
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVH--P----NKWDCVATCFFIDCANNIVSFIETIFNILKP 253 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~--~----~~fD~V~t~ffidta~n~~~yl~~I~~~Lkp 253 (298)
....++.+..+|+.+.... . ++||+|+... ...+...+++.+.++|||
T Consensus 113 -----------------------~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~---~~~~~~~~l~~~~~~L~p 166 (225)
T 3tr6_A 113 -----------------------GLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDA---DKANTDLYYEESLKLLRE 166 (225)
T ss_dssp -----------------------TCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEEE
T ss_pred -----------------------CCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECC---CHHHHHHHHHHHHHhcCC
Confidence 0013588999998765321 1 7999998433 345678899999999999
Q ss_pred CeEEEEecc
Q psy3185 254 GGIWINLGP 262 (298)
Q Consensus 254 GG~~In~gP 262 (298)
||+++....
T Consensus 167 gG~lv~~~~ 175 (225)
T 3tr6_A 167 GGLIAVDNV 175 (225)
T ss_dssp EEEEEEECS
T ss_pred CcEEEEeCC
Confidence 999985443
No 171
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.38 E-value=1.3e-12 Score=116.35 Aligned_cols=134 Identities=10% Similarity=0.018 Sum_probs=78.1
Q ss_pred CCCeEEEecccCcHHHHHHHHc----CCeEEEeeCCHHHHHHHHHHHhhhh--hcccc-----cccccccccccccccc-
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR----GYVCQGNEFSLFMLFASNFILNKCR--EKNVY-----KIYPWVQQTDNNILTH- 186 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~----G~~v~g~D~S~~Ml~~a~~~l~~~~--~~~~~-----~i~p~~~~~s~~~~~~- 186 (298)
++.+|||+|||+|.++..+++. +..|+|+|+|+.|+..|+..+.... ..... ..|......+ .....
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPS-YLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHH-HHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhccccc-chhhhh
Confidence 4579999999999999999987 5789999999999999886432210 00000 0000000000 00000
Q ss_pred --cccc-ccccCCCCCCCCCCCCCeeEEecccccccc-----CCCceeEEEecc-ccc--C------cchHHHHHHHHHH
Q psy3185 187 --HQTM-AVTFPDINTSDYNDDCDFSMAAGDFLQVYV-----HPNKWDCVATCF-FID--C------ANNIVSFIETIFN 249 (298)
Q Consensus 187 --~~~r-~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~-----~~~~fD~V~t~f-fid--t------a~n~~~yl~~I~~ 249 (298)
+.++ ..+... ......+..+|+.+... ..++||+|++.. ++. . ......+++.+++
T Consensus 130 ~~~~v~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (250)
T 1o9g_A 130 AARRLRERLTAEG-------GALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLAS 202 (250)
T ss_dssp HHHHHHHHHHHTT-------SSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhccccc-------cccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHH
Confidence 0000 000000 00112388899877542 335899999863 221 1 2456789999999
Q ss_pred hccCCeEEEEe
Q psy3185 250 ILKPGGIWINL 260 (298)
Q Consensus 250 ~LkpGG~~In~ 260 (298)
+|||||+++..
T Consensus 203 ~LkpgG~l~~~ 213 (250)
T 1o9g_A 203 ALPAHAVIAVT 213 (250)
T ss_dssp HSCTTCEEEEE
T ss_pred hcCCCcEEEEe
Confidence 99999999853
No 172
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.37 E-value=1.7e-12 Score=121.44 Aligned_cols=114 Identities=17% Similarity=0.140 Sum_probs=85.8
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTD 180 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s 180 (298)
....+.+.++. ..+.+|||+|||+|.++..+++.+ .+|+|+|+|+.|+..++..+...
T Consensus 184 ~~~~ll~~l~~----~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~---------------- 243 (343)
T 2pjd_A 184 GSQLLLSTLTP----HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN---------------- 243 (343)
T ss_dssp HHHHHHHHSCT----TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHhcCc----CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh----------------
Confidence 34555666632 135699999999999999999987 58999999999999888743210
Q ss_pred ccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccC-----cchHHHHHHHHHHhccCCe
Q psy3185 181 NNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDC-----ANNIVSFIETIFNILKPGG 255 (298)
Q Consensus 181 ~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidt-----a~n~~~yl~~I~~~LkpGG 255 (298)
.....+..+|+.+.. +++||+|++...++. ..+...++++++++|||||
T Consensus 244 ------------------------~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG 297 (343)
T 2pjd_A 244 ------------------------GVEGEVFASNVFSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGG 297 (343)
T ss_dssp ------------------------TCCCEEEECSTTTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEE
T ss_pred ------------------------CCCCEEEEccccccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCc
Confidence 012446778876653 679999999765552 4567889999999999999
Q ss_pred EEEEecc
Q psy3185 256 IWINLGP 262 (298)
Q Consensus 256 ~~In~gP 262 (298)
.++.+.+
T Consensus 298 ~l~i~~~ 304 (343)
T 2pjd_A 298 ELRIVAN 304 (343)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9986544
No 173
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.37 E-value=4e-12 Score=109.95 Aligned_cols=98 Identities=17% Similarity=0.104 Sum_probs=77.3
Q ss_pred CCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
+.+|||+|||+|..+..+|+. +..|+|+|+|+.|+..++..+....
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~------------------------------- 105 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG------------------------------- 105 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS-------------------------------
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC-------------------------------
Confidence 469999999999999999987 6799999999999998887433210
Q ss_pred CCCCCCCCCCCeeEEeccccccc-cCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
+ ..++.+..+|+.+.. ..++ ||+|++.. ...+...+++.+.++|||||+++.
T Consensus 106 -----~--~~~v~~~~~d~~~~~~~~~~-fD~v~~~~---~~~~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 106 -----L--IDRVELQVGDPLGIAAGQRD-IDILFMDC---DVFNGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp -----G--GGGEEEEESCHHHHHTTCCS-EEEEEEET---TTSCHHHHHHHHGGGEEEEEEEEE
T ss_pred -----C--CceEEEEEecHHHHhccCCC-CCEEEEcC---ChhhhHHHHHHHHHhcCCCeEEEE
Confidence 0 125788999987653 2346 99998653 245678999999999999999985
No 174
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.36 E-value=7.4e-12 Score=117.38 Aligned_cols=134 Identities=15% Similarity=0.110 Sum_probs=95.6
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcC---CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRG---YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G---~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
+...+....+. .++.+|||||||+|.++.++|..+ ..|+|+|+|+.|+..|+..+...
T Consensus 191 la~~l~~~~~~----~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~--------------- 251 (354)
T 3tma_A 191 LAQALLRLADA----RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS--------------- 251 (354)
T ss_dssp HHHHHHHHTTC----CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHHhCC----CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc---------------
Confidence 44555555442 246799999999999999999976 78999999999999988733210
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEec--ccc--cCcch----HHHHHHHHHHhc
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC--FFI--DCANN----IVSFIETIFNIL 251 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~--ffi--dta~n----~~~yl~~I~~~L 251 (298)
.+ .++.+..+|+.++....+.||+|++. |.. ....+ ...+++.+.++|
T Consensus 252 ---------------------g~---~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~L 307 (354)
T 3tma_A 252 ---------------------GL---SWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALL 307 (354)
T ss_dssp ---------------------TC---TTCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTS
T ss_pred ---------------------CC---CceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhc
Confidence 01 16789999999987666789999984 322 11122 257899999999
Q ss_pred cCCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 252 KPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 252 kpGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
||||.++.+.| +.+.+..+.+ .||++.+
T Consensus 308 kpgG~l~i~t~----------------~~~~~~~~~~-~g~~~~~ 335 (354)
T 3tma_A 308 PPGGRVALLTL----------------RPALLKRALP-PGFALRH 335 (354)
T ss_dssp CTTCEEEEEES----------------CHHHHHHHCC-TTEEEEE
T ss_pred CCCcEEEEEeC----------------CHHHHHHHhh-cCcEEEE
Confidence 99999886543 1333444554 7777654
No 175
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.36 E-value=7.2e-12 Score=111.66 Aligned_cols=132 Identities=14% Similarity=0.018 Sum_probs=83.6
Q ss_pred CCCCeEEEecccCcHHHHHHHHc-C--CeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccccccccccccccc
Q psy3185 118 PKDVNILVPGAGLGRLAFEIARR-G--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTF 194 (298)
Q Consensus 118 ~~~~~VLdpGcG~Grla~ela~~-G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~i 194 (298)
.++.+|||+|||+|..+..+|+. | ..|+|+|+|+.|+...... +..
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~---a~~---------------------------- 123 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLV---AQR---------------------------- 123 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHH---HHH----------------------------
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHH---hhh----------------------------
Confidence 35789999999999999999986 3 4899999999997533221 111
Q ss_pred CCCCCCCCCCCCCeeEEecccccccc---CCCceeEEEecccccCcchHHHH-HHHHHHhccCCeEEEEeccccccccCC
Q psy3185 195 PDINTSDYNDDCDFSMAAGDFLQVYV---HPNKWDCVATCFFIDCANNIVSF-IETIFNILKPGGIWINLGPLLYHYSNM 270 (298)
Q Consensus 195 pd~~~~~~~~~~~~~~~~gDf~~~~~---~~~~fD~V~t~ffidta~n~~~y-l~~I~~~LkpGG~~In~gPl~y~~~~~ 270 (298)
..|+.+..+|...... ..++||+|++.... ++.... +..+.++|||||.++.. .+.....
T Consensus 124 ----------r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvis---ik~~~~d 187 (232)
T 3id6_C 124 ----------RPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLV---IKARSID 187 (232)
T ss_dssp ----------CTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEE---EC-----
T ss_pred ----------cCCeEEEEcccccchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEE---EccCCcc
Confidence 0267777888765421 24689999876533 444444 45666699999999853 1221100
Q ss_pred CCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 271 LNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 271 ~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
.....-+.. ++....+++.||++++.
T Consensus 188 ~t~~~~e~~-~~~~~~L~~~gf~~~~~ 213 (232)
T 3id6_C 188 VTKDPKEIY-KTEVEKLENSNFETIQI 213 (232)
T ss_dssp --CCSSSST-THHHHHHHHTTEEEEEE
T ss_pred cCCCHHHHH-HHHHHHHHHCCCEEEEE
Confidence 000111222 44556667889999764
No 176
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.36 E-value=4.6e-12 Score=122.47 Aligned_cols=127 Identities=15% Similarity=0.162 Sum_probs=86.6
Q ss_pred HHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CC-eEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 101 EPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 101 ~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
..++..+.+.+.. .++.+|||+|||+|+++..+|+. |. .|+|+|.|+.|+..|..++....+. .
T Consensus 228 p~~v~~ml~~l~l----~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~--~-------- 293 (433)
T 1u2z_A 228 PNFLSDVYQQCQL----KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKR--C-------- 293 (433)
T ss_dssp HHHHHHHHHHTTC----CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHH--H--------
T ss_pred HHHHHHHHHhcCC----CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHH--H--------
Confidence 4566666666542 35679999999999999999996 64 6999999999999884433321110 0
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEecc-ccc---cccCCCceeEEEecccccCcchHHHHHHHHHHhccCC
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGD-FLQ---VYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPG 254 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gD-f~~---~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpG 254 (298)
+ .. .+. ..++.+..|| +.. +....++||+|++..++ ..+++...|+++.++||||
T Consensus 294 -----------~-----~~---Gl~-~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpG 352 (433)
T 1u2z_A 294 -----------K-----LY---GMR-LNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVG 352 (433)
T ss_dssp -----------H-----HT---TBC-CCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTT
T ss_pred -----------H-----Hc---CCC-CCceEEEEcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCC
Confidence 0 00 000 0367787764 432 11124789999876444 3468889999999999999
Q ss_pred eEEEEecc
Q psy3185 255 GIWINLGP 262 (298)
Q Consensus 255 G~~In~gP 262 (298)
|.++...|
T Consensus 353 G~lVi~d~ 360 (433)
T 1u2z_A 353 CKIISLKS 360 (433)
T ss_dssp CEEEESSC
T ss_pred eEEEEeec
Confidence 99987543
No 177
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.34 E-value=2.8e-11 Score=113.72 Aligned_cols=136 Identities=15% Similarity=0.110 Sum_probs=99.8
Q ss_pred CCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
...+|||+|||+|.++..|+++. ..++..|. +.|+..++.....
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~--------------------------------- 224 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSF--------------------------------- 224 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---------------------------------
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhh---------------------------------
Confidence 35699999999999999999984 45777786 7888887752210
Q ss_pred CCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcc--hHHHHHHHHHHhccCCeEEEEeccccccccCCC---
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCAN--NIVSFIETIFNILKPGGIWINLGPLLYHYSNML--- 271 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~--n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~--- 271 (298)
....+++++.|||.+-+ ...+|+|+....|+.-+ +....|+++++.|||||.++.+.+++-.....+
T Consensus 225 ------~~~~rv~~~~gD~~~~~--~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~ 296 (353)
T 4a6d_A 225 ------QEEEQIDFQEGDFFKDP--LPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLT 296 (353)
T ss_dssp --------CCSEEEEESCTTTSC--CCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHH
T ss_pred ------cccCceeeecCccccCC--CCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHH
Confidence 11258999999997653 34579999988887543 356889999999999999886554321111000
Q ss_pred ---------CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 272 ---------NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 272 ---------~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.....+.|.+|++++++++||++++
T Consensus 297 ~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~ 330 (353)
T 4a6d_A 297 QLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330 (353)
T ss_dssp HHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 0134578999999999999999875
No 178
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.34 E-value=2.5e-12 Score=106.14 Aligned_cols=93 Identities=16% Similarity=0.140 Sum_probs=73.0
Q ss_pred CCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..+++. +..|+|+|+|+ |+..
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------------------------------- 61 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------------------------------- 61 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------------------------------
Confidence 4679999999999999999987 37899999999 7421
Q ss_pred CCCCCCCCCCCCeeEEeccccccc--------cCCCceeEEEecccccCcchH-----------HHHHHHHHHhccCCeE
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVY--------VHPNKWDCVATCFFIDCANNI-----------VSFIETIFNILKPGGI 256 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~--------~~~~~fD~V~t~ffidta~n~-----------~~yl~~I~~~LkpGG~ 256 (298)
.++.+..+|+.+.. .++++||+|++...+++..+. ..+++++.++|||||.
T Consensus 62 ----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~ 131 (180)
T 1ej0_A 62 ----------VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS 131 (180)
T ss_dssp ----------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred ----------CcEEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcE
Confidence 14567778887764 456899999987655544333 6899999999999999
Q ss_pred EEEec
Q psy3185 257 WINLG 261 (298)
Q Consensus 257 ~In~g 261 (298)
++...
T Consensus 132 l~~~~ 136 (180)
T 1ej0_A 132 FVVKV 136 (180)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98543
No 179
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.34 E-value=1.3e-11 Score=108.71 Aligned_cols=113 Identities=16% Similarity=0.051 Sum_probs=85.3
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
....+....+. .++.+|||+|||+|.++..+++.+..|+|+|+|+.|+..++......
T Consensus 79 ~~~~~~~~~~~----~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------ 136 (248)
T 2yvl_A 79 DSFYIALKLNL----NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKF------------------ 136 (248)
T ss_dssp HHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHT------------------
T ss_pred hHHHHHHhcCC----CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHc------------------
Confidence 34455555442 24679999999999999999999889999999999999888643210
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEecc
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGP 262 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gP 262 (298)
.+ ..++.+..+|+.+....+++||+|++. .++...+++.+.++|||||.++...|
T Consensus 137 ------------------~~--~~~~~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 137 ------------------NL--GKNVKFFNVDFKDAEVPEGIFHAAFVD-----VREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp ------------------TC--CTTEEEECSCTTTSCCCTTCBSEEEEC-----SSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ------------------CC--CCcEEEEEcChhhcccCCCcccEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 00 136778888888764245789999873 33556789999999999999986655
No 180
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.34 E-value=6.1e-12 Score=119.52 Aligned_cols=117 Identities=12% Similarity=0.046 Sum_probs=84.9
Q ss_pred HHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 105 SEILARFPPETINPKDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 105 ~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
..+.+.++. ..+.+|||+|||+|.++..++++ +.+|+|+|+|+.|+..++..+....
T Consensus 212 ~~ll~~l~~----~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ng----------------- 270 (375)
T 4dcm_A 212 RFFMQHLPE----NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM----------------- 270 (375)
T ss_dssp HHHHHTCCC----SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHhCcc----cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcC-----------------
Confidence 445566653 23579999999999999999998 5789999999999998887332100
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccC-----cchHHHHHHHHHHhccCCeEE
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDC-----ANNIVSFIETIFNILKPGGIW 257 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidt-----a~n~~~yl~~I~~~LkpGG~~ 257 (298)
+ ....++.+..+|+.+.. .+++||+|++..-++. ......+++.+.++|||||.+
T Consensus 271 -----------l--------~~~~~v~~~~~D~~~~~-~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l 330 (375)
T 4dcm_A 271 -----------P--------EALDRCEFMINNALSGV-EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 330 (375)
T ss_dssp -----------G--------GGGGGEEEEECSTTTTC-CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEE
T ss_pred -----------C--------CcCceEEEEechhhccC-CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEE
Confidence 0 00125778899988743 5679999998744332 222347899999999999999
Q ss_pred EEecc
Q psy3185 258 INLGP 262 (298)
Q Consensus 258 In~gP 262 (298)
+.+++
T Consensus 331 ~iv~n 335 (375)
T 4dcm_A 331 YIVAN 335 (375)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 86543
No 181
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.34 E-value=2.5e-12 Score=117.36 Aligned_cols=127 Identities=13% Similarity=0.155 Sum_probs=77.3
Q ss_pred CCeEEEecccCcH----HHHHHHHc------CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccc--cccc-cccccccc
Q psy3185 120 DVNILVPGAGLGR----LAFEIARR------GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYP--WVQQ-TDNNILTH 186 (298)
Q Consensus 120 ~~~VLdpGcG~Gr----la~ela~~------G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p--~~~~-~s~~~~~~ 186 (298)
+.+|||+|||||. +|..|++. +++|+|+|+|+.||..|+.- .-......-.| +... +.......
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~---~y~~~~~~~~~~~~~~~~f~~~~~~~ 182 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSG---IYRLSELKTLSPQQLQRYFMRGTGPH 182 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHT---EEEGGGGTTSCHHHHHHHEEECCTTS
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhc---CCchhhhhcCCHHHHHHHhhccccCC
Confidence 5799999999999 55555554 47899999999999998861 10000000000 0000 00000000
Q ss_pred cccccccc-CCCCCCCCCCCCCeeEEeccccccccC-CCceeEEEecccccCc--chHHHHHHHHHHhccCCeEEE
Q psy3185 187 HQTMAVTF-PDINTSDYNDDCDFSMAAGDFLQVYVH-PNKWDCVATCFFIDCA--NNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 187 ~~~r~~~i-pd~~~~~~~~~~~~~~~~gDf~~~~~~-~~~fD~V~t~ffidta--~n~~~yl~~I~~~LkpGG~~I 258 (298)
+ ..+.+ |.+ ..++.+..+|..+.+.+ .++||+|++...+... +.....++.+++.|||||+++
T Consensus 183 ~--~~~~v~~~l-------r~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~ 249 (274)
T 1af7_A 183 E--GLVRVRQEL-------ANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLF 249 (274)
T ss_dssp C--SEEEECHHH-------HTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEE
T ss_pred C--Cceeechhh-------cccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEE
Confidence 0 00011 000 13688999999885333 5789999987665433 345789999999999999987
No 182
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.33 E-value=7.2e-12 Score=109.32 Aligned_cols=101 Identities=16% Similarity=0.083 Sum_probs=77.2
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-------eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-------VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMA 191 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-------~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~ 191 (298)
++.+|||+|||+|.++..+++.+. .|+|+|.|+.|+..++..+.... ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~-------------------- 135 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDK----PE-------------------- 135 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHC----GG--------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcC----cc--------------------
Confidence 467999999999999999999864 89999999999999887433210 00
Q ss_pred cccCCCCCCCCCCCCCeeEEeccccccc----cCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 192 VTFPDINTSDYNDDCDFSMAAGDFLQVY----VHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 192 ~~ipd~~~~~~~~~~~~~~~~gDf~~~~----~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.+ ...++.+..+|+.+.. ...++||+|++...++.. ++.+.++|||||+++.
T Consensus 136 ----~~------~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~ 191 (227)
T 2pbf_A 136 ----LL------KIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLII 191 (227)
T ss_dssp ----GG------SSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEE
T ss_pred ----cc------ccCCEEEEECChHhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEE
Confidence 00 0136888999988765 456789999887766543 5888999999999874
No 183
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.33 E-value=7.6e-12 Score=109.87 Aligned_cols=100 Identities=16% Similarity=0.127 Sum_probs=79.8
Q ss_pred CCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
+.+|||+|||+|.++..+|+. +..|+|+|.|+.|+..++..+...
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------------- 101 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL--------------------------------- 101 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT---------------------------------
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc---------------------------------
Confidence 569999999999999999998 689999999999999988743321
Q ss_pred CCCCCCCCCCeeEEecccccccc-C--CCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV-H--PNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~-~--~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~ 260 (298)
....++.+..+|+.+... . +++||+|++.... ++...+++.+.++|||||+++..
T Consensus 102 -----~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 102 -----GLESRIELLFGDALQLGEKLELYPLFDVLFIDAAK---GQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp -----TCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGG---SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred -----CCCCcEEEEECCHHHHHHhcccCCCccEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEE
Confidence 001367888999887532 2 5789999887654 36789999999999999999853
No 184
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.33 E-value=6e-12 Score=112.60 Aligned_cols=109 Identities=15% Similarity=0.131 Sum_probs=83.5
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
++..+....+ +.+|||+|||+|..+..+|+. +..|+++|.|+.|+..++..+....
T Consensus 70 ll~~l~~~~~-------~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g-------------- 128 (247)
T 1sui_A 70 FLSMLLKLIN-------AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG-------------- 128 (247)
T ss_dssp HHHHHHHHTT-------CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT--------------
T ss_pred HHHHHHHhhC-------cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--------------
Confidence 5555555433 469999999999999999987 6899999999999999887443210
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEecccccccc-------CCCceeEEEecccccCcchHHHHHHHHHHhcc
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYV-------HPNKWDCVATCFFIDCANNIVSFIETIFNILK 252 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~-------~~~~fD~V~t~ffidta~n~~~yl~~I~~~Lk 252 (298)
+ ..++.+..||..+... .+++||+|++.. ...+...+++.+.++||
T Consensus 129 ----------------------~--~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~Lk 181 (247)
T 1sui_A 129 ----------------------V--DHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDA---DKDNYLNYHKRLIDLVK 181 (247)
T ss_dssp ----------------------C--GGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECS---CSTTHHHHHHHHHHHBC
T ss_pred ----------------------C--CCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcC---chHHHHHHHHHHHHhCC
Confidence 0 1368899999877532 157899997643 24567899999999999
Q ss_pred CCeEEEE
Q psy3185 253 PGGIWIN 259 (298)
Q Consensus 253 pGG~~In 259 (298)
|||+++.
T Consensus 182 pGG~lv~ 188 (247)
T 1sui_A 182 VGGVIGY 188 (247)
T ss_dssp TTCCEEE
T ss_pred CCeEEEE
Confidence 9999984
No 185
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.33 E-value=1.8e-12 Score=115.73 Aligned_cols=99 Identities=11% Similarity=0.111 Sum_probs=79.0
Q ss_pred CCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
+.+|||+|||+|..+..||+. +..|+|+|+|+.|+..++..+...
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-------------------------------- 108 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA-------------------------------- 108 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT--------------------------------
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 469999999999999999984 678999999999998887643321
Q ss_pred CCCCCCCCCCCeeEEeccccccccC------CCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVH------PNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~------~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
....++.+..||+.+.... .++||+|+... ...+...|++.+.++|||||+++.
T Consensus 109 ------g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~ 168 (242)
T 3r3h_A 109 ------KQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDA---DKTNYLNYYELALKLVTPKGLIAI 168 (242)
T ss_dssp ------TCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEES---CGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcC---ChHHhHHHHHHHHHhcCCCeEEEE
Confidence 0013788999999876432 58999987643 245678899999999999999984
No 186
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.32 E-value=2e-11 Score=115.58 Aligned_cols=123 Identities=17% Similarity=0.159 Sum_probs=92.1
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC--eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY--VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~--~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||||||+|.++.++|..|. .|+|+|+|+.|+..|+..+...
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~-------------------------------- 264 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA-------------------------------- 264 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--------------------------------
Confidence 467999999999999999999987 8999999999999988743210
Q ss_pred CCCCCCCCCCCeeEEeccccccccCCCceeEEEec--cc--c---cCcchH-HHHHHHHHHhccCCeEEEEecccccccc
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC--FF--I---DCANNI-VSFIETIFNILKPGGIWINLGPLLYHYS 268 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~--ff--i---dta~n~-~~yl~~I~~~LkpGG~~In~gPl~y~~~ 268 (298)
.+ ..++.+..+|+.++...+++||+|++. |. + +...++ ..+++.+.++| +|+.++.. +
T Consensus 265 ----gl--~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~-~------ 330 (373)
T 3tm4_A 265 ----GV--LDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT-T------ 330 (373)
T ss_dssp ----TC--GGGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEE-S------
T ss_pred ----CC--CCceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE-C------
Confidence 00 136789999999987767899999985 22 1 122333 56889999988 44433321 1
Q ss_pred CCCCCCccCCCHHHHHHHHHhCCCEEEEe
Q psy3185 269 NMLNEDSIEPSYEVVKQVIQGLGFVYEVE 297 (298)
Q Consensus 269 ~~~~~~~~~ls~eEl~~~~~~~GF~i~~~ 297 (298)
+.+.+.+.+.+.||++.+.
T Consensus 331 ----------~~~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 331 ----------EKKAIEEAIAENGFEIIHH 349 (373)
T ss_dssp ----------CHHHHHHHHHHTTEEEEEE
T ss_pred ----------CHHHHHHHHHHcCCEEEEE
Confidence 3788888999999998764
No 187
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.32 E-value=1.1e-11 Score=109.12 Aligned_cols=96 Identities=20% Similarity=0.083 Sum_probs=74.2
Q ss_pred CCCeEEEecccCcHHHHHHHHcC-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+++.+ ..|+|+|+|+.|+..++..+...
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------------- 137 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERA--------------------------------- 137 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHc---------------------------------
Confidence 46799999999999999999986 89999999999999888743320
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
. ..++.+..+|+..-....+.||+|++...+.... +.+.++|||||.++.
T Consensus 138 ---~---~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi 187 (235)
T 1jg1_A 138 ---G---VKNVHVILGDGSKGFPPKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLII 187 (235)
T ss_dssp ---T---CCSEEEEESCGGGCCGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEE
T ss_pred ---C---CCCcEEEECCcccCCCCCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEE
Confidence 0 0257788898733333334699999887776554 378899999999864
No 188
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.32 E-value=3.1e-12 Score=113.69 Aligned_cols=118 Identities=11% Similarity=0.057 Sum_probs=86.8
Q ss_pred CCeEEEecccCcHHHHHHHHc------CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccc
Q psy3185 120 DVNILVPGAGLGRLAFEIARR------GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVT 193 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~------G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ 193 (298)
+.+|||+|||+|..+..||+. +..|+|+|+|+.|+..++. .
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~---~------------------------------ 128 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS---D------------------------------ 128 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG---G------------------------------
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc---c------------------------------
Confidence 469999999999999999987 6789999999999765431 0
Q ss_pred cCCCCCCCCCCCCCeeEEecccccc---cc-CCCceeEEEecccccCcchHHHHHHHHHH-hccCCeEEEEec--ccccc
Q psy3185 194 FPDINTSDYNDDCDFSMAAGDFLQV---YV-HPNKWDCVATCFFIDCANNIVSFIETIFN-ILKPGGIWINLG--PLLYH 266 (298)
Q Consensus 194 ipd~~~~~~~~~~~~~~~~gDf~~~---~~-~~~~fD~V~t~ffidta~n~~~yl~~I~~-~LkpGG~~In~g--Pl~y~ 266 (298)
..++.++.||+.+. .. ...+||+|+.... + .++..+++++.+ +|||||+++... |...
T Consensus 129 -----------~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~-~--~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~- 193 (236)
T 2bm8_A 129 -----------MENITLHQGDCSDLTTFEHLREMAHPLIFIDNA-H--ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWY- 193 (236)
T ss_dssp -----------CTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS-C--SSHHHHHHHHHHHTCCTTCEEEECSCHHHHH-
T ss_pred -----------CCceEEEECcchhHHHHHhhccCCCCEEEECCc-h--HhHHHHHHHHHHhhCCCCCEEEEEeCccccc-
Confidence 03688899998874 32 2347998875433 2 367889999997 999999998532 2111
Q ss_pred ccCCCCCCccCCCHHHHHHHHHhC--CCEEE
Q psy3185 267 YSNMLNEDSIEPSYEVVKQVIQGL--GFVYE 295 (298)
Q Consensus 267 ~~~~~~~~~~~ls~eEl~~~~~~~--GF~i~ 295 (298)
..+.+++.+++++. +|++.
T Consensus 194 ----------~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 194 ----------RYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp ----------HHCHHHHHHHHHTTTTTEEEE
T ss_pred ----------ccCHHHHHHHHHhCcccEEEc
Confidence 11245888888877 68875
No 189
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.31 E-value=2.7e-11 Score=112.20 Aligned_cols=129 Identities=14% Similarity=0.055 Sum_probs=90.7
Q ss_pred CCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|..+..||+. +..|+|+|+|+.|+..++..+.+..
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g------------------------------ 167 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG------------------------------ 167 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT------------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC------------------------------
Confidence 4679999999999999999986 3689999999999998887443210
Q ss_pred CCCCCCCCCCCCeeEEeccccccccCCCceeEEEec---c---cccCcch----------------HHHHHHHHHHhccC
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC---F---FIDCANN----------------IVSFIETIFNILKP 253 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~---f---fidta~n----------------~~~yl~~I~~~Lkp 253 (298)
+ .++.++.+|+.++...+++||+|++. . .+...++ ...+++.+.++|||
T Consensus 168 ------~---~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp 238 (315)
T 1ixk_A 168 ------V---LNVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP 238 (315)
T ss_dssp ------C---CSEEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred ------C---CeEEEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 0 26788899998875546789998862 1 1222121 25889999999999
Q ss_pred CeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 254 GGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 254 GG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
||+++-..- ..+. +=+.+.+..++++.||+++.
T Consensus 239 GG~lv~stc-s~~~---------~Ene~~v~~~l~~~~~~~~~ 271 (315)
T 1ixk_A 239 GGILVYSTC-SLEP---------EENEFVIQWALDNFDVELLP 271 (315)
T ss_dssp EEEEEEEES-CCCG---------GGTHHHHHHHHHHSSEEEEC
T ss_pred CCEEEEEeC-CCCh---------HHhHHHHHHHHhcCCCEEec
Confidence 999973211 0111 11245677888889988763
No 190
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.30 E-value=1.9e-11 Score=111.52 Aligned_cols=131 Identities=14% Similarity=0.111 Sum_probs=94.1
Q ss_pred CeEEEecccC--cHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 121 VNILVPGAGL--GRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 121 ~~VLdpGcG~--Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
.+|||+|||+ |....+++++ +..|+++|.|+.||..++..+..
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~-------------------------------- 127 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAS-------------------------------- 127 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCC--------------------------------
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhcc--------------------------------
Confidence 5899999998 5566777764 67899999999999988875421
Q ss_pred CCCCCCCCCCCCeeEEecccccccc----C--CCcee-----EEEecccccCcch---HHHHHHHHHHhccCCeEEEEe-
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYV----H--PNKWD-----CVATCFFIDCANN---IVSFIETIFNILKPGGIWINL- 260 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~----~--~~~fD-----~V~t~ffidta~n---~~~yl~~I~~~LkpGG~~In~- 260 (298)
.+ ..++.++.+|+.+... . .+.|| +|+++..|++.++ ...+++++++.|+|||+++..
T Consensus 128 ------~~-~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 128 ------TP-EGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp ------CS-SSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred ------CC-CCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 01 1468899999987521 1 35566 5777777776665 678999999999999999742
Q ss_pred -c-cc----------cccccCCCCCCccCCCHHHHHHHHHhCCCEEE
Q psy3185 261 -G-PL----------LYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 261 -g-Pl----------~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~ 295 (298)
. +. .|... +.+....|.+|+.+++. ||+++
T Consensus 201 ~~~d~~p~~~~~~~~~~~~~---g~p~~~rs~~ei~~~f~--Glelv 242 (277)
T 3giw_A 201 GTAEFAPQEVGRVAREYAAR---NMPMRLRTHAEAEEFFE--GLELV 242 (277)
T ss_dssp ECCTTSHHHHHHHHHHHHHT---TCCCCCCCHHHHHHTTT--TSEEC
T ss_pred ccCCCCHHHHHHHHHHHHhc---CCCCccCCHHHHHHHhC--CCccc
Confidence 1 11 01111 12445579999999994 99975
No 191
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.30 E-value=1.4e-11 Score=109.41 Aligned_cols=110 Identities=17% Similarity=0.219 Sum_probs=77.5
Q ss_pred CCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+|+.+ ..|+|+|+|+.|+..++..+......+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~---------------------------- 100 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNT---------------------------- 100 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC----------------------------
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhcc----------------------------
Confidence 46799999999999999999986 479999999999998876433211000
Q ss_pred CCCCCCCCCCCeeEEeccccc-cc--cCCCceeEEEecccccCcc-h--------HHHHHHHHHHhccCCeEEEEe
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQ-VY--VHPNKWDCVATCFFIDCAN-N--------IVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~-~~--~~~~~fD~V~t~ffidta~-n--------~~~yl~~I~~~LkpGG~~In~ 260 (298)
.. .....++.++.+|+.+ +. .+.+++|.|+.+| -+... . ...+++.+.++|||||+++..
T Consensus 101 --~~-~~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~-p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 101 --AS-KHGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCF-PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp ---C-CSTTTTEEEEECCTTSCGGGTSCTTCEEEEEEES-CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred --cc-ccCCCcEEEEeccHHHHHHHhccccccCEEEEEC-CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 00 0001368889999876 32 3568999888654 12110 0 047999999999999998854
No 192
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.30 E-value=9.5e-12 Score=111.95 Aligned_cols=107 Identities=17% Similarity=0.111 Sum_probs=78.3
Q ss_pred CCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+|+++ ..|+|+|+|+.|+..++....... .
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~------------------------------~ 85 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPD------------------------------N 85 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGG------------------------------G
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhh------------------------------h
Confidence 46799999999999999999985 689999999999999876221000 0
Q ss_pred CCCCCCCCCCCeeEEeccccccc-------cCCCceeEEEec--cccc----------------CcchHHHHHHHHHHhc
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVY-------VHPNKWDCVATC--FFID----------------CANNIVSFIETIFNIL 251 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~-------~~~~~fD~V~t~--ffid----------------ta~n~~~yl~~I~~~L 251 (298)
..+ ..++.+..+|+.++. ..+++||+|++. |+.. ....+..+++.+.++|
T Consensus 86 ---~~l--~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~L 160 (260)
T 2ozv_A 86 ---AAF--SARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIM 160 (260)
T ss_dssp ---TTT--GGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHE
T ss_pred ---CCC--cceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHc
Confidence 000 125888999998872 246799999986 4332 1123678999999999
Q ss_pred cCCeEEEEe
Q psy3185 252 KPGGIWINL 260 (298)
Q Consensus 252 kpGG~~In~ 260 (298)
||||.++.+
T Consensus 161 kpgG~l~~~ 169 (260)
T 2ozv_A 161 VSGGQLSLI 169 (260)
T ss_dssp EEEEEEEEE
T ss_pred CCCCEEEEE
Confidence 999998754
No 193
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.29 E-value=2e-11 Score=108.29 Aligned_cols=109 Identities=14% Similarity=0.088 Sum_probs=83.6
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQT 179 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~ 179 (298)
++..+....+ +.+|||+|||+|..+..+|+. +..|+++|.|+.|+..++..+.+..
T Consensus 61 ~l~~l~~~~~-------~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-------------- 119 (237)
T 3c3y_A 61 LMSFVLKLVN-------AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG-------------- 119 (237)
T ss_dssp HHHHHHHHTT-------CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--------------
T ss_pred HHHHHHHhhC-------CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--------------
Confidence 5566555443 469999999999999999986 6799999999999999887443210
Q ss_pred cccccccccccccccCCCCCCCCCCCCCeeEEecccccccc-------CCCceeEEEecccccCcchHHHHHHHHHHhcc
Q psy3185 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYV-------HPNKWDCVATCFFIDCANNIVSFIETIFNILK 252 (298)
Q Consensus 180 s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~-------~~~~fD~V~t~ffidta~n~~~yl~~I~~~Lk 252 (298)
+ ..++.+..||..+... ..++||+|+... ...+...|++.+.++||
T Consensus 120 ----------------------~--~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~---~~~~~~~~l~~~~~~L~ 172 (237)
T 3c3y_A 120 ----------------------V--EHKINFIESDAMLALDNLLQGQESEGSYDFGFVDA---DKPNYIKYHERLMKLVK 172 (237)
T ss_dssp ----------------------C--GGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEE
T ss_pred ----------------------C--CCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECC---chHHHHHHHHHHHHhcC
Confidence 0 1368889999877532 157899997542 34567899999999999
Q ss_pred CCeEEEE
Q psy3185 253 PGGIWIN 259 (298)
Q Consensus 253 pGG~~In 259 (298)
|||+++.
T Consensus 173 pGG~lv~ 179 (237)
T 3c3y_A 173 VGGIVAY 179 (237)
T ss_dssp EEEEEEE
T ss_pred CCeEEEE
Confidence 9999884
No 194
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.29 E-value=1.5e-11 Score=107.27 Aligned_cols=101 Identities=21% Similarity=0.180 Sum_probs=76.1
Q ss_pred CCCeEEEecccCcHHHHHHHHc-C--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-G--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..+++. | ..|+|+|+|+.|+..++..+.... .. .
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~----------------------~- 129 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD----PT----------------------L- 129 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC----TH----------------------H-
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc----cc----------------------c-
Confidence 4679999999999999999987 4 589999999999998876432200 00 0
Q ss_pred CCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
....++.+..+|+.......++||+|++...+... ++.+.++|||||+++.
T Consensus 130 -------~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~------~~~~~~~LkpgG~lv~ 180 (226)
T 1i1n_A 130 -------LSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVV------PQALIDQLKPGGRLIL 180 (226)
T ss_dssp -------HHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSSC------CHHHHHTEEEEEEEEE
T ss_pred -------cCCCcEEEEECCcccCcccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEE
Confidence 00136788899987765556789999877665433 4688999999999874
No 195
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.29 E-value=1.8e-11 Score=106.72 Aligned_cols=101 Identities=16% Similarity=0.121 Sum_probs=78.4
Q ss_pred CCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
+.+|||+|||+|..+..+|+. +..|+++|.|+.|+..++..+....
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g------------------------------- 118 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE------------------------------- 118 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT-------------------------------
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC-------------------------------
Confidence 569999999999999999986 5789999999999999887443210
Q ss_pred CCCCCCCCCCCeeEEeccccccccC---C---CceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEec
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVH---P---NKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLG 261 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~---~---~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~g 261 (298)
+ ..++.+..+|+.+.... . ++||+|++... ..+...+++.+.++|||||+++...
T Consensus 119 -----~--~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 119 -----A--EHKIDLRLKPALETLDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp -----C--TTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred -----C--CCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 0 13688899998765321 1 78999987432 4556789999999999999998544
No 196
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.29 E-value=1.3e-11 Score=108.13 Aligned_cols=101 Identities=20% Similarity=0.151 Sum_probs=75.5
Q ss_pred CCCeEEEecccCcHHHHHHHHc-C-------CeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-G-------YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTM 190 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G-------~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r 190 (298)
++.+|||+|||+|.++..+++. | ..|+|+|+|+.|+..++..+..... .
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~------------------- 140 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDR----S------------------- 140 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHH----H-------------------
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCc----c-------------------
Confidence 4679999999999999999985 5 3899999999999998874432100 0
Q ss_pred ccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 191 AVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 191 ~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
... ..++.+..+|..+.....++||+|++...++.. .+.+.++|||||+++.
T Consensus 141 ~~~-----------~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lvi 192 (227)
T 1r18_A 141 MLD-----------SGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDT------PTELINQLASGGRLIV 192 (227)
T ss_dssp HHH-----------HTSEEEEESCGGGCCGGGCSEEEEEECSCBSSC------CHHHHHTEEEEEEEEE
T ss_pred ccC-----------CCceEEEECCcccCCCcCCCccEEEECCchHHH------HHHHHHHhcCCCEEEE
Confidence 000 026778889987744344789999888776654 3788999999999863
No 197
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.29 E-value=3.1e-12 Score=113.82 Aligned_cols=140 Identities=10% Similarity=0.016 Sum_probs=86.0
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..++++ +..|+|+|+|+.|+..|+..+...
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------------------------------- 112 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-------------------------------- 112 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 3579999999999999999987 689999999999999988743210
Q ss_pred CCCCCCCCCCCeeEEecccccc---ccC---CCceeEEEec--ccccC-----c--c------hHHHHHHHHHHhccCCe
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQV---YVH---PNKWDCVATC--FFIDC-----A--N------NIVSFIETIFNILKPGG 255 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~---~~~---~~~fD~V~t~--ffidt-----a--~------n~~~yl~~I~~~LkpGG 255 (298)
.+ ..++.+..+|..+. +.. +++||+|++. |+-.. . . .....+..++++|||||
T Consensus 113 ----~~--~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG 186 (254)
T 2h00_A 113 ----NL--SDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGG 186 (254)
T ss_dssp ----TC--TTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHT
T ss_pred ----CC--CccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCC
Confidence 00 12578888886552 122 2689999987 32111 0 1 11245678899999999
Q ss_pred EEEEecccc---ccc-cCCC---CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 256 IWINLGPLL---YHY-SNML---NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 256 ~~In~gPl~---y~~-~~~~---~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.+..+.++. +.. .... .......+.+++.+++++.||+.+.
T Consensus 187 ~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~ 234 (254)
T 2h00_A 187 ELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVT 234 (254)
T ss_dssp HHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEE
T ss_pred EEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceE
Confidence 764322110 000 0000 0011223458999999999997653
No 198
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.29 E-value=1.4e-11 Score=108.73 Aligned_cols=100 Identities=16% Similarity=0.075 Sum_probs=77.5
Q ss_pred CCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
+.+|||+|||+|..+..+|+. +..|+|+|.|+.|+..++..+....
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g------------------------------- 109 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG------------------------------- 109 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-------------------------------
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-------------------------------
Confidence 569999999999999999987 5789999999999999887543210
Q ss_pred CCCCCCCCCCCeeEEecccccccc---------------C-C-CceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYV---------------H-P-NKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~---------------~-~-~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
...++.+..+|+.+... + + ++||+|++.+ ..++...+++.+.++|||||+++.
T Consensus 110 -------~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~---~~~~~~~~l~~~~~~L~pgG~lv~ 179 (239)
T 2hnk_A 110 -------LENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDA---DKENYPNYYPLILKLLKPGGLLIA 179 (239)
T ss_dssp -------CGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeC---CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 01247778888765321 1 2 7899998764 345677999999999999999985
Q ss_pred e
Q psy3185 260 L 260 (298)
Q Consensus 260 ~ 260 (298)
.
T Consensus 180 ~ 180 (239)
T 2hnk_A 180 D 180 (239)
T ss_dssp E
T ss_pred E
Confidence 3
No 199
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.29 E-value=2.5e-11 Score=107.16 Aligned_cols=100 Identities=16% Similarity=0.085 Sum_probs=77.3
Q ss_pred CCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
+.+|||+|||+|..+..+|+. +..|+++|.|+.|+..++..+....
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g------------------------------- 121 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG------------------------------- 121 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-------------------------------
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-------------------------------
Confidence 469999999999999999986 5789999999999999887443210
Q ss_pred CCCCCCCCCCCeeEEecccccccc----CC--CceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEe
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYV----HP--NKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~----~~--~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~ 260 (298)
+ ..++.+..+|+.+... .+ ++||+|++.. ...+...+++.+.++|||||+++..
T Consensus 122 -----~--~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 122 -----V--AEKISLRLGPALATLEQLTQGKPLPEFDLIFIDA---DKRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp -----C--GGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECS---CGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred -----C--CCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECC---CHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 0 1257788888765421 12 7899997543 2467789999999999999999853
No 200
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.28 E-value=1.2e-11 Score=116.00 Aligned_cols=128 Identities=13% Similarity=0.049 Sum_probs=94.7
Q ss_pred CCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
..+|||+|||+|.++..+++++ ..++++|+ +.|+..++.
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------------------------------- 234 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG-------------------------------------- 234 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC--------------------------------------
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc--------------------------------------
Confidence 5699999999999999999984 57999999 577642210
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHH--HHHHHHHHhccC---CeEEEEeccccccccCC--
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIV--SFIETIFNILKP---GGIWINLGPLLYHYSNM-- 270 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~--~yl~~I~~~Lkp---GG~~In~gPl~y~~~~~-- 270 (298)
. .++.+..+||.+ ..+ .||+|++.+.++...+.. ..+++++++||| ||.++...+..-.....
T Consensus 235 ----~---~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~ 304 (358)
T 1zg3_A 235 ----N---ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 304 (358)
T ss_dssp ----C---SSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHH
T ss_pred ----C---CCcEEEeCccCC-CCC--CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccch
Confidence 0 258899999987 332 499999999998777644 999999999999 99887544321100000
Q ss_pred -------------CCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 271 -------------LNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 271 -------------~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
......+.+.+|+.++++++||++++
T Consensus 305 ~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 343 (358)
T 1zg3_A 305 LTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYK 343 (358)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEE
T ss_pred hhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeE
Confidence 00013456999999999999999875
No 201
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.28 E-value=2e-11 Score=112.38 Aligned_cols=106 Identities=20% Similarity=0.264 Sum_probs=74.9
Q ss_pred CCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
+.+|||+|||+|.++.++++. ..+|+++|+|+.|+..|+..+.....
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~------------------------------- 132 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA------------------------------- 132 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHS-------------------------------
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccc-------------------------------
Confidence 579999999999999999998 35799999999999999873321100
Q ss_pred CCCCCCCCCCeeEEecccccccc-CCCceeEEEeccccc--CcchH--HHHHHHHHHhccCCeEEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV-HPNKWDCVATCFFID--CANNI--VSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~-~~~~fD~V~t~ffid--ta~n~--~~yl~~I~~~LkpGG~~In 259 (298)
. .+ ...++.+..||..++.. .+++||+|++..+-. ....+ .++++.++++|||||+++.
T Consensus 133 ~--~~-~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~ 196 (294)
T 3adn_A 133 G--SY-DDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp S--CT-TCTTCCEECSCSCC---CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEE
T ss_pred c--cc-cCCceEEEEChHHHHHhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEE
Confidence 0 00 11478899999877643 357999998854322 12222 6799999999999999974
No 202
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.27 E-value=1.4e-11 Score=120.68 Aligned_cols=100 Identities=21% Similarity=0.211 Sum_probs=78.1
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+|+.|. .|+|+|.|. |+..|+......
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~--------------------------------- 203 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSN--------------------------------- 203 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHc---------------------------------
Confidence 467999999999999999999875 799999999 998887643210
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEeccccc--CcchHHHHHHHHHHhccCCeEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFID--CANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffid--ta~n~~~yl~~I~~~LkpGG~~I 258 (298)
.+ ..++.+..+|+.++.. +++||+|++...+. ..++....+..+.++|||||+++
T Consensus 204 ---gl--~~~v~~~~~d~~~~~~-~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li 260 (480)
T 3b3j_A 204 ---NL--TDRIVVIPGKVEEVSL-PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMF 260 (480)
T ss_dssp ---TC--TTTEEEEESCTTTCCC-SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEE
T ss_pred ---CC--CCcEEEEECchhhCcc-CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEE
Confidence 01 1378899999988643 46899999864322 33566778889999999999997
No 203
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.26 E-value=9.1e-11 Score=100.71 Aligned_cols=120 Identities=16% Similarity=0.049 Sum_probs=87.7
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+++.|. .|+|+|+|+.|+..++.....
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~---------------------------------- 94 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGE---------------------------------- 94 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGG----------------------------------
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHH----------------------------------
Confidence 467999999999999999999987 599999999999988763211
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecc--cccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCc
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCF--FIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDS 275 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~f--fidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~ 275 (298)
. ..++.+..+|+.++. ++||+|++.. +.........+++.+.++| ||+++..-+ .
T Consensus 95 -----~-~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~~~----~-------- 151 (207)
T 1wy7_A 95 -----F-KGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIHLA----K-------- 151 (207)
T ss_dssp -----G-TTSEEEEESCGGGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEEEC----C--------
T ss_pred -----c-CCCEEEEECchHHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEEeC----C--------
Confidence 0 015778999998863 5899999863 3323234567899999998 776653300 0
Q ss_pred cCCCHHHHHHHHHhCCCEEEE
Q psy3185 276 IEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 276 ~~ls~eEl~~~~~~~GF~i~~ 296 (298)
.-+.+.+.+.+.+.||++..
T Consensus 152 -~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 152 -PEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp -HHHHHHHHHHHHHTTEEEEE
T ss_pred -cCCHHHHHHHHHHCCCeEEE
Confidence 01256678888899998753
No 204
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.25 E-value=4.6e-11 Score=111.81 Aligned_cols=107 Identities=21% Similarity=0.240 Sum_probs=79.1
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++.++++. +.+|+++|+|+.|+..|+..+..... .
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~-----------------------------g 170 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAI-----------------------------G 170 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHG-----------------------------G
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcc-----------------------------c
Confidence 3579999999999999999988 46899999999999998863221000 0
Q ss_pred CCCCCCCCCCCeeEEecccccccc--CCCceeEEEeccc--ccCcch--HHHHHHHHHHhccCCeEEEEe
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYV--HPNKWDCVATCFF--IDCANN--IVSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~--~~~~fD~V~t~ff--idta~n--~~~yl~~I~~~LkpGG~~In~ 260 (298)
+ ...++.++.+|+.++.. .+++||+|++..+ ...... ..++++.++++|||||+++..
T Consensus 171 l------~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 171 Y------EDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp G------GSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred c------CCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 0 01378899999877532 3578999997543 222222 368999999999999999853
No 205
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.24 E-value=3.3e-11 Score=111.63 Aligned_cols=106 Identities=15% Similarity=0.145 Sum_probs=79.0
Q ss_pred CCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
+.+|||+|||+|.++.++++. +.+|+++|+|+.|+..++..+..... .
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~-----------------------------~- 127 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQ-----------------------------G- 127 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHT-----------------------------T-
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc-----------------------------c-
Confidence 579999999999999999988 46899999999999998863221000 0
Q ss_pred CCCCCCCCCCeeEEeccccccc-cCCCceeEEEecccccC---c--ch--HHHHHHHHHHhccCCeEEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFFIDC---A--NN--IVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ffidt---a--~n--~~~yl~~I~~~LkpGG~~In 259 (298)
.+ ...++.++.+|..++. ..+++||+|++..+.+. . .. ..++++.++++|||||+++.
T Consensus 128 ---~~-~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 193 (314)
T 1uir_A 128 ---AF-DDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGM 193 (314)
T ss_dssp ---GG-GCTTEEEEESCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEE
T ss_pred ---cc-cCCceEEEEchHHHHHHhcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEE
Confidence 00 0137889999988753 24689999988765433 1 12 36899999999999999873
No 206
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.23 E-value=3.3e-11 Score=102.87 Aligned_cols=33 Identities=24% Similarity=0.130 Sum_probs=29.6
Q ss_pred CCCeEEEecccCcHHHHHHHHc----CCeEEEeeCCH
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR----GYVCQGNEFSL 151 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~----G~~v~g~D~S~ 151 (298)
++.+|||+|||+|.++..++++ +..|+|+|+|+
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 4579999999999999999987 36899999998
No 207
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.23 E-value=3.6e-11 Score=111.76 Aligned_cols=111 Identities=14% Similarity=0.137 Sum_probs=76.6
Q ss_pred CCCeEEEecccCcHHHHHHHHc-C--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-G--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|.++..+++. | ..|+|+|+|+.|+..|+..+..... .+ .+.
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~----------------------~ln 160 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRD--SW----------------------KLS 160 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHH--HH----------------------TTT
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhc--cc----------------------ccc
Confidence 4679999999999999999997 5 7899999999999998874332100 00 000
Q ss_pred CCCCCCCCCCCCeeEEeccccccc--cCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEecc
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVY--VHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGP 262 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~--~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gP 262 (298)
.+. ....++.+..+|+.+.. .++++||+|++.. .+...+++.+.++|||||.++...|
T Consensus 161 ~~~----~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 161 HVE----EWPDNVDFIHKDISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp CSS----CCCCCEEEEESCTTCCC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred ccc----ccCCceEEEECChHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 000 00137889999998763 2457899998743 2233479999999999999986544
No 208
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.23 E-value=2.5e-11 Score=115.96 Aligned_cols=108 Identities=14% Similarity=0.194 Sum_probs=83.1
Q ss_pred hhHHHHHHHHhhCCCCCCCCCCCeEEEeccc------CcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccc
Q psy3185 99 CYEPIISEILARFPPETINPKDVNILVPGAG------LGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNV 169 (298)
Q Consensus 99 ~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG------~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~ 169 (298)
.|.++.+.+.+.+.. ++.+|||+||| +|..+..+++. +..|+|+|+|+.|.. .
T Consensus 201 ~y~~~Ye~lL~~l~~-----~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~-------~------ 262 (419)
T 3sso_A 201 WFTPHYDRHFRDYRN-----QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV-------D------ 262 (419)
T ss_dssp BCHHHHHHHHGGGTT-----SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG-------C------
T ss_pred hHHHHHHHHHHhhcC-----CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh-------c------
Confidence 455666666554432 46799999999 88888888865 578999999999820 0
Q ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccC------CCceeEEEecccccCcchHHHH
Q psy3185 170 YKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVH------PNKWDCVATCFFIDCANNIVSF 243 (298)
Q Consensus 170 ~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~------~~~fD~V~t~ffidta~n~~~y 243 (298)
..++.+..||+.++... +++||+|++.. .+...+...+
T Consensus 263 -----------------------------------~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~a 306 (419)
T 3sso_A 263 -----------------------------------ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTS 306 (419)
T ss_dssp -----------------------------------BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHH
T ss_pred -----------------------------------CCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHH
Confidence 03788999999887554 58999998753 4556788899
Q ss_pred HHHHHHhccCCeEEEEe
Q psy3185 244 IETIFNILKPGGIWINL 260 (298)
Q Consensus 244 l~~I~~~LkpGG~~In~ 260 (298)
|++++++|||||++|..
T Consensus 307 L~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 307 FAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHGGGEEEEEEEEEE
T ss_pred HHHHHHhcCCCeEEEEE
Confidence 99999999999999854
No 209
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.22 E-value=5.1e-11 Score=108.87 Aligned_cols=100 Identities=14% Similarity=0.230 Sum_probs=75.7
Q ss_pred CCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
+.+|||+|||+|.++..+++. +..|+|+|+|+.|+..++......
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~---------------------------------- 169 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERH---------------------------------- 169 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc----------------------------------
Confidence 469999999999999999998 789999999999999988733210
Q ss_pred CCCCCCCCCeeEEeccccccccCCCce---eEEEecc-ccc------------------CcchHHHHHHHHH-HhccCCe
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKW---DCVATCF-FID------------------CANNIVSFIETIF-NILKPGG 255 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~f---D~V~t~f-fid------------------ta~n~~~yl~~I~-~~LkpGG 255 (298)
.+ ..++.+..+|+.+.. .++| |+|++.- ++. ...+-..+++.|. +.|||||
T Consensus 170 --~l--~~~v~~~~~D~~~~~--~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG 243 (284)
T 1nv8_A 170 --GV--SDRFFVRKGEFLEPF--KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGK 243 (284)
T ss_dssp --TC--TTSEEEEESSTTGGG--GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTC
T ss_pred --CC--CCceEEEECcchhhc--ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCC
Confidence 00 125889999998753 2589 9999861 111 1112237899999 9999999
Q ss_pred EEEE
Q psy3185 256 IWIN 259 (298)
Q Consensus 256 ~~In 259 (298)
.++.
T Consensus 244 ~l~~ 247 (284)
T 1nv8_A 244 IVLM 247 (284)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
No 210
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.21 E-value=2.9e-11 Score=112.44 Aligned_cols=100 Identities=20% Similarity=0.197 Sum_probs=77.5
Q ss_pred CCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
..+|||+|||+|.++.++++. +.+|+++|+|+.|+..++..+.
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~----------------------------------- 134 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFD----------------------------------- 134 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSC-----------------------------------
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcc-----------------------------------
Confidence 459999999999999999983 6789999999999999886211
Q ss_pred CCCCCCCCCCeeEEecccccccc--CCCceeEEEeccccc--CcchH--HHHHHHHHHhccCCeEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV--HPNKWDCVATCFFID--CANNI--VSFIETIFNILKPGGIWI 258 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~--~~~~fD~V~t~ffid--ta~n~--~~yl~~I~~~LkpGG~~I 258 (298)
++...++.++.+|..++.. .+++||+|++-.+-. ....+ .++++.++++|||||+++
T Consensus 135 ----~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv 197 (317)
T 3gjy_A 135 ----IPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYV 197 (317)
T ss_dssp ----CCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEE
T ss_pred ----ccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEE
Confidence 0112478999999887643 357999998754432 12222 689999999999999986
No 211
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.21 E-value=2.4e-11 Score=110.78 Aligned_cols=111 Identities=15% Similarity=0.179 Sum_probs=76.7
Q ss_pred CCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
+.+|||+|||+|.++.++++.|. +|+++|+|+.|+..|+..+ .... . ++...
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~--~------------------------l~~~~ 128 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDN--G------------------------LLEAM 128 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTT--T------------------------HHHHH
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhcc--c------------------------ccccc
Confidence 57999999999999999999864 7999999999999988632 1000 0 00000
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEeccccc--CcchH--HHHHHHHHHhccCCeEEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFID--CANNI--VSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffid--ta~n~--~~yl~~I~~~LkpGG~~In 259 (298)
.. ....++.++.+|..++...+++||+|++..+.. ....+ .++++.++++|||||+++.
T Consensus 129 ~~--~~~~~v~~~~~D~~~~l~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~ 191 (281)
T 1mjf_A 129 LN--GKHEKAKLTIGDGFEFIKNNRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVT 191 (281)
T ss_dssp HT--TCCSSEEEEESCHHHHHHHCCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEE
T ss_pred cc--CCCCcEEEEECchHHHhcccCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 00 011478899999876532267899998754321 11222 6899999999999999974
No 212
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.21 E-value=1.5e-10 Score=109.51 Aligned_cols=126 Identities=14% Similarity=0.052 Sum_probs=90.7
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC--eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY--VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~--~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+| |+|.++..+++.|. .|+|+|+|+.|+..++......
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~-------------------------------- 218 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI-------------------------------- 218 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 467999999 99999999999875 7999999999999988733210
Q ss_pred CCCCCCCCCCCeeEEeccccc-ccc-CCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCC
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQ-VYV-HPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNED 274 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~-~~~-~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~ 274 (298)
.+ .++.++.||+.+ ++. .+++||+|++.-..... ....+++.+.++|||||.++.+ ...
T Consensus 219 ----g~---~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~-----~~~------ 279 (373)
T 2qm3_A 219 ----GY---EDIEIFTFDLRKPLPDYALHKFDTFITDPPETLE-AIRAFVGRGIATLKGPRCAGYF-----GIT------ 279 (373)
T ss_dssp ----TC---CCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHH-HHHHHHHHHHHTBCSTTCEEEE-----EEC------
T ss_pred ----CC---CCEEEEEChhhhhchhhccCCccEEEECCCCchH-HHHHHHHHHHHHcccCCeEEEE-----EEe------
Confidence 00 268899999988 442 24689999886322212 3588999999999999943211 111
Q ss_pred ccCCCH---HHHHHHHH-hCCCEEEE
Q psy3185 275 SIEPSY---EVVKQVIQ-GLGFVYEV 296 (298)
Q Consensus 275 ~~~ls~---eEl~~~~~-~~GF~i~~ 296 (298)
...-+. +++.+.+. ..||.+..
T Consensus 280 ~~~~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 280 RRESSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp TTTCCHHHHHHHHHHHHHTSCCEEEE
T ss_pred cCcCCHHHHHHHHHHHHHhcCcchhh
Confidence 012234 78888888 89998753
No 213
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.21 E-value=5.5e-11 Score=108.52 Aligned_cols=107 Identities=22% Similarity=0.281 Sum_probs=79.2
Q ss_pred CCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++.++++.+ .+|+++|+|+.|+..++..+..
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~--------------------------------- 124 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKN--------------------------------- 124 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTT---------------------------------
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHH---------------------------------
Confidence 35799999999999999999883 6899999999999998863211
Q ss_pred CCCCCCCCCCCeeEEecccccccc-CCCceeEEEeccccc--CcchH--HHHHHHHHHhccCCeEEEEe
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYV-HPNKWDCVATCFFID--CANNI--VSFIETIFNILKPGGIWINL 260 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~-~~~~fD~V~t~ffid--ta~n~--~~yl~~I~~~LkpGG~~In~ 260 (298)
... .+ ...++.++.+|..++.. .+++||+|++..+.. ....+ .++++.++++|||||+++..
T Consensus 125 ~~~-~~-~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 125 ISC-GY-EDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp TSG-GG-GSTTEEEEESCHHHHHHHCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred hcc-cc-CCCcEEEEECChHHHHHhCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 000 00 01478899999877532 368999998754322 23333 58999999999999999853
No 214
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.21 E-value=1.5e-10 Score=104.79 Aligned_cols=128 Identities=18% Similarity=0.075 Sum_probs=88.7
Q ss_pred CCCeEEEecccCcHHHHHHHHc--C-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--G-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|..+..+|+. | ..|+|+|.|+.|+..++..+.+.
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~------------------------------- 131 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM------------------------------- 131 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT-------------------------------
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh-------------------------------
Confidence 4679999999999999999984 5 68999999999999887643320
Q ss_pred CCCCCCCCCCCCeeEEecccccccc----CCCceeEEEec---cc---cc------------CcchHHHHHHHHHHhccC
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYV----HPNKWDCVATC---FF---ID------------CANNIVSFIETIFNILKP 253 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~----~~~~fD~V~t~---ff---id------------ta~n~~~yl~~I~~~Lkp 253 (298)
.+ .++.+..+|+.++.. ..++||+|++. .. +. ........++.+.++|||
T Consensus 132 -----g~---~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkp 203 (274)
T 3ajd_A 132 -----GV---LNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKK 203 (274)
T ss_dssp -----TC---CSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEE
T ss_pred -----CC---CcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 00 267889999987754 26789998764 11 11 113457899999999999
Q ss_pred CeEEEEeccccccccCCCCCCccCCCHHHHHHHHHh-CCCEEE
Q psy3185 254 GGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQG-LGFVYE 295 (298)
Q Consensus 254 GG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~-~GF~i~ 295 (298)
||.++-...-. .-+=+.+.+..++++ .+|+++
T Consensus 204 gG~lv~stcs~----------~~~ene~~v~~~l~~~~~~~~~ 236 (274)
T 3ajd_A 204 DGELVYSTCSM----------EVEENEEVIKYILQKRNDVELI 236 (274)
T ss_dssp EEEEEEEESCC----------CTTSSHHHHHHHHHHCSSEEEE
T ss_pred CCEEEEEECCC----------ChHHhHHHHHHHHHhCCCcEEe
Confidence 99987422111 111125566666654 467765
No 215
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.20 E-value=4.5e-11 Score=108.38 Aligned_cols=97 Identities=15% Similarity=0.117 Sum_probs=77.1
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC--eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY--VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~--~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++..+|+.+. .|+|+|+|+.|+..++.-... +
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~----n---------------------------- 166 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKL----N---------------------------- 166 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHH----T----------------------------
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH----c----------------------------
Confidence 467999999999999999999854 899999999999988763221 0
Q ss_pred CCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.+ .++.+..||+.++ ...++||+|++... .+..+++..+.++|||||+++.
T Consensus 167 ----~l---~~~~~~~~d~~~~-~~~~~~D~Vi~d~p----~~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 167 ----KL---NNVIPILADNRDV-ELKDVADRVIMGYV----HKTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp ----TC---SSEEEEESCGGGC-CCTTCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEE
T ss_pred ----CC---CCEEEEECChHHc-CccCCceEEEECCc----ccHHHHHHHHHHHcCCCCEEEE
Confidence 00 2677999999887 44678999986543 2566789999999999998873
No 216
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.20 E-value=1.2e-10 Score=106.37 Aligned_cols=111 Identities=14% Similarity=0.204 Sum_probs=78.9
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+++.+.+..+. .++.+|||+|||+|.++..|++.|..|+|+|+|+.|+..++......
T Consensus 16 i~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------ 73 (285)
T 1zq9_A 16 IINSIIDKAAL----RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGT------------------ 73 (285)
T ss_dssp HHHHHHHHTCC----CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTS------------------
T ss_pred HHHHHHHhcCC----CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhc------------------
Confidence 66666666653 24679999999999999999999999999999999999887632110
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHH-HHH--------------HHH
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIV-SFI--------------ETI 247 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~-~yl--------------~~I 247 (298)
+...++.++.+|+.++.. .+||+|++..-.+....+. ..+ +++
T Consensus 74 --------------------~~~~~v~~~~~D~~~~~~--~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEv 131 (285)
T 1zq9_A 74 --------------------PVASKLQVLVGDVLKTDL--PFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREF 131 (285)
T ss_dssp --------------------TTGGGEEEEESCTTTSCC--CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHH
T ss_pred --------------------CCCCceEEEEcceecccc--hhhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHH
Confidence 001368899999988743 3799998865444333222 333 223
Q ss_pred --HHhccCCeEE
Q psy3185 248 --FNILKPGGIW 257 (298)
Q Consensus 248 --~~~LkpGG~~ 257 (298)
.++|||||.+
T Consensus 132 a~r~vlkPGg~~ 143 (285)
T 1zq9_A 132 ALRLVAKPGDKL 143 (285)
T ss_dssp HHHHHCCTTCTT
T ss_pred HHHHhcCCCCcc
Confidence 3689999965
No 217
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.19 E-value=1e-10 Score=108.04 Aligned_cols=106 Identities=17% Similarity=0.184 Sum_probs=76.3
Q ss_pred CCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|.++.++++++ .+|+++|+|+.|+..++..+..... .
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~-----------------------------~ 145 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAI-----------------------------G 145 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHG-----------------------------G
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhc-----------------------------c
Confidence 35799999999999999999984 6899999999999998863221000 0
Q ss_pred CCCCCCCCCCCeeEEeccccccc-cCCCceeEEEecccccC--cc--hHHHHHHHHHHhccCCeEEEE
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFFIDC--AN--NIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ffidt--a~--n~~~yl~~I~~~LkpGG~~In 259 (298)
+ ...++.++.+|..++. ..+++||+|++..+... .. ...++++.++++|||||+++.
T Consensus 146 -----~-~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 207 (304)
T 2o07_A 146 -----Y-SSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCC 207 (304)
T ss_dssp -----G-GCTTEEEEESCHHHHHHTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEE
T ss_pred -----c-CCCcEEEEECcHHHHHhhCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEE
Confidence 0 0137889999987743 23579999987543211 11 124789999999999999984
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.18 E-value=5.3e-11 Score=110.73 Aligned_cols=105 Identities=22% Similarity=0.255 Sum_probs=77.9
Q ss_pred CCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
+.+|||+|||+|.++.++++. +.+|+++|+|+.|+..++..+.....
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~------------------------------- 165 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISC------------------------------- 165 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSG-------------------------------
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcc-------------------------------
Confidence 579999999999999999988 46899999999999998863211000
Q ss_pred CCCCCCCCCCeeEEeccccccc-cCCCceeEEEecccc--cCcchH--HHHHHHHHHhccCCeEEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFFI--DCANNI--VSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ffi--dta~n~--~~yl~~I~~~LkpGG~~In 259 (298)
.+ ...++.+..+|+.+.. ..+++||+|++..+- .....+ .++++.+.++|||||+++.
T Consensus 166 ---~~-~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 228 (321)
T 2pt6_A 166 ---GY-EDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVA 228 (321)
T ss_dssp ---GG-GSTTEEEEESCHHHHHHHCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEE
T ss_pred ---cc-CCCcEEEEEccHHHHHhhcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 00 0137889999987753 235789999875431 112233 6899999999999999985
No 219
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.18 E-value=7.3e-11 Score=107.33 Aligned_cols=105 Identities=20% Similarity=0.186 Sum_probs=77.8
Q ss_pred CCeEEEecccCcHHHHHHHHc-C-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR-G-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~-G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
+.+|||+|||+|.++.++++. | .+|+++|+|+.|+..++.-+.....
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~------------------------------- 124 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAG------------------------------- 124 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHT-------------------------------
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcc-------------------------------
Confidence 579999999999999999988 5 5799999999999998863211000
Q ss_pred CCCCCCCCCCeeEEeccccccc-cCCCceeEEEecccccCcc--h--HHHHHHHHHHhccCCeEEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFFIDCAN--N--IVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ffidta~--n--~~~yl~~I~~~LkpGG~~In 259 (298)
.+ ...++.++.+|..++. ..+++||+|++..+-...+ . ..++++.++++|||||+++.
T Consensus 125 ---~~-~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~ 187 (275)
T 1iy9_A 125 ---KL-DDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVA 187 (275)
T ss_dssp ---TT-TSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEE
T ss_pred ---cc-CCCceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 00 1147899999987753 2357999998754322111 1 25799999999999999974
No 220
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.18 E-value=1.1e-10 Score=107.37 Aligned_cols=105 Identities=15% Similarity=0.145 Sum_probs=75.7
Q ss_pred CCeEEEecccCcHHHHHHHHc-C-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR-G-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~-G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
+.+|||+|||+|.++.++++. + .+|+++|+|+.|+..++..+..... .+
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~-----------------------------~~ 141 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSC-----------------------------GF 141 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHG-----------------------------GG
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc-----------------------------cc
Confidence 579999999999999999998 3 5899999999999998863211000 00
Q ss_pred CCCCCCCCCCeeEEeccccccc-cCCCceeEEEeccccc---Ccc--hHHHHHHHHHHhccCCeEEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFFID---CAN--NIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ffid---ta~--n~~~yl~~I~~~LkpGG~~In 259 (298)
...++.++.+|+.++. ..+++||+|++..+-. ... ...++++.+.++|||||+++.
T Consensus 142 ------~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 203 (296)
T 1inl_A 142 ------DDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSA 203 (296)
T ss_dssp ------GCTTEEEEESCHHHHGGGCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCCceEEEECcHHHHHhhCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEE
Confidence 0137889999987743 2357899998743211 111 126899999999999999974
No 221
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.17 E-value=8.7e-11 Score=101.11 Aligned_cols=91 Identities=12% Similarity=0.059 Sum_probs=68.3
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+|+++..|+|+|+|+.+ .
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~---------~----------------------------------- 60 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME---------E----------------------------------- 60 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC---------C-----------------------------------
T ss_pred CCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc---------c-----------------------------------
Confidence 46899999999999999999999999999999631 0
Q ss_pred CCCCCCCCCeeEEecccccccc--------C---CCceeEEEecccccC-----------cchHHHHHHHHHHhccCCeE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYV--------H---PNKWDCVATCFFIDC-----------ANNIVSFIETIFNILKPGGI 256 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~--------~---~~~fD~V~t~ffidt-----------a~n~~~yl~~I~~~LkpGG~ 256 (298)
..++.+..||+++... . .++||+|++....++ .......++.+.++|||||.
T Consensus 61 ------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~ 134 (191)
T 3dou_A 61 ------IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGN 134 (191)
T ss_dssp ------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred ------CCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCE
Confidence 0267788999877531 1 149999998542221 11234678889999999999
Q ss_pred EEE
Q psy3185 257 WIN 259 (298)
Q Consensus 257 ~In 259 (298)
++.
T Consensus 135 lv~ 137 (191)
T 3dou_A 135 VLL 137 (191)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 222
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.17 E-value=2e-10 Score=98.22 Aligned_cols=112 Identities=13% Similarity=0.052 Sum_probs=81.1
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+++.|. .|+|+|+|+.|+..++...
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~------------------------------------ 94 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNC------------------------------------ 94 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHC------------------------------------
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhc------------------------------------
Confidence 467999999999999999999987 5999999999999887510
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcc--hHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCc
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCAN--NIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDS 275 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~--n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~ 275 (298)
.++.+..+|+.++. ++||+|++..-+++.. ....+++.+.++| |++++...|-
T Consensus 95 --------~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~~~------------ 149 (200)
T 1ne2_A 95 --------GGVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGNAK------------ 149 (200)
T ss_dssp --------TTSEEEECCGGGCC---CCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEEEGG------------
T ss_pred --------CCCEEEECcHHHCC---CCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEEcCc------------
Confidence 14668889988863 7899999874433332 2347899999998 6666543320
Q ss_pred cCCCHHHHHHHHHhCCCEEE
Q psy3185 276 IEPSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 276 ~~ls~eEl~~~~~~~GF~i~ 295 (298)
+.+.+.+++...| ++.
T Consensus 150 ---~~~~~~~~~~~~g-~~~ 165 (200)
T 1ne2_A 150 ---ARDFLRREFSARG-DVF 165 (200)
T ss_dssp ---GHHHHHHHHHHHE-EEE
T ss_pred ---hHHHHHHHHHHCC-CEE
Confidence 1456777777777 543
No 223
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.17 E-value=9.5e-12 Score=113.53 Aligned_cols=99 Identities=12% Similarity=0.025 Sum_probs=70.3
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..+|++ ..|+|+|+|+ |+..++. . | .+.
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~---~----------~-------------------~~~-- 125 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHE---K----------P-------------------RLV-- 125 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSC---C----------C-------------------CCC--
T ss_pred CCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhh---c----------h-------------------hhh--
Confidence 4679999999999999999999 6899999998 7432110 0 0 000
Q ss_pred CCCCCCCCCeeEE--eccccccccCCCceeEEEecccccCcch-------HHHHHHHHHHhccCCe--EEEE
Q psy3185 199 TSDYNDDCDFSMA--AGDFLQVYVHPNKWDCVATCFFIDCANN-------IVSFIETIFNILKPGG--IWIN 259 (298)
Q Consensus 199 ~~~~~~~~~~~~~--~gDf~~~~~~~~~fD~V~t~ffidta~n-------~~~yl~~I~~~LkpGG--~~In 259 (298)
. ....++.+. .+|+.+++ +++||+|++.+. ....+ ....++.+.++||||| .++.
T Consensus 126 -~--~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 126 -E--TFGWNLITFKSKVDVTKME--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp -C--CTTGGGEEEECSCCGGGCC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred -h--hcCCCeEEEeccCcHhhCC--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 0 001267788 99998874 679999998754 32211 1137899999999999 8874
No 224
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.17 E-value=8e-11 Score=106.52 Aligned_cols=97 Identities=14% Similarity=0.062 Sum_probs=74.1
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|.++.++++.+.+|+++|+|+.|+..|+..+..... .+
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~--------------------------~~----- 121 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHE--------------------------VK----- 121 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHH--------------------------HH-----
T ss_pred CCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhcc--------------------------cc-----
Confidence 56999999999999999998886799999999999877642110000 00
Q ss_pred CCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
...++.+..+|..++. ++||+|++.. .+...+++.+.++|||||+++.
T Consensus 122 ----~~~rv~~~~~D~~~~~---~~fD~Ii~d~-----~dp~~~~~~~~~~L~pgG~lv~ 169 (262)
T 2cmg_A 122 ----NNKNFTHAKQLLDLDI---KKYDLIFCLQ-----EPDIHRIDGLKRMLKEDGVFIS 169 (262)
T ss_dssp ----TCTTEEEESSGGGSCC---CCEEEEEESS-----CCCHHHHHHHHTTEEEEEEEEE
T ss_pred ----CCCeEEEEechHHHHH---hhCCEEEECC-----CChHHHHHHHHHhcCCCcEEEE
Confidence 0137888999988764 7899998752 2334599999999999999985
No 225
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.16 E-value=9.5e-11 Score=108.78 Aligned_cols=105 Identities=19% Similarity=0.244 Sum_probs=74.7
Q ss_pred CCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
+.+|||+|||+|.++.++++. +..|+++|+|+.|+..|+..+.. .
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~---------------------------------~ 155 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPG---------------------------------M 155 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTT---------------------------------T
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHH---------------------------------h
Confidence 569999999999999999987 36899999999999998863211 0
Q ss_pred CCCCCCCCCCeeEEeccccccc-cCCCceeEEEeccccc--CcchH--HHHHHHHHHhccCCeEEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATCFFID--CANNI--VSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~ffid--ta~n~--~~yl~~I~~~LkpGG~~In 259 (298)
.. .+ ...++.++.+|+.+.. ..+++||+|++..+-. ....+ .++++.+.++|||||+++.
T Consensus 156 ~~-~~-~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~ 220 (314)
T 2b2c_A 156 SC-GF-SHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSS 220 (314)
T ss_dssp SG-GG-GCTTEEEECSCHHHHHHHCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEE
T ss_pred cc-cc-CCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEE
Confidence 00 00 0147889999987753 2467999998754321 12223 5899999999999999974
No 226
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.16 E-value=1.5e-10 Score=110.19 Aligned_cols=103 Identities=14% Similarity=0.138 Sum_probs=76.0
Q ss_pred CCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
+.+|||+|||+|.++..+|+.|. .|+|+|.|+.|+..|+.-... +
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~----n------------------------------ 258 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEA----N------------------------------ 258 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHH----T------------------------------
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----c------------------------------
Confidence 56999999999999999999887 799999999999988763211 0
Q ss_pred CCCCCCCCCeeEEecccccccc----CCCceeEEEec--cc-------ccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYV----HPNKWDCVATC--FF-------IDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~----~~~~fD~V~t~--ff-------idta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.+. ..++.+..+|+.++.. ..++||+|++. +| .+......+.++.+.++|||||+++.
T Consensus 259 --~~~-~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~ 329 (385)
T 2b78_A 259 --HLD-MANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIA 329 (385)
T ss_dssp --TCC-CTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred --CCC-ccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 000 0168899999877532 24589999873 21 12233455677888999999999874
No 227
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.16 E-value=2.3e-10 Score=102.34 Aligned_cols=120 Identities=14% Similarity=0.063 Sum_probs=91.0
Q ss_pred hHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccc
Q psy3185 93 SEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKI 172 (298)
Q Consensus 93 ~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i 172 (298)
-.||-++|+++...+.+. + .+.+|||+|||+|-|+..++ -+..++|.|+|..|+..++..+...
T Consensus 86 TrerLp~ld~fY~~i~~~-~------~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~-------- 149 (253)
T 3frh_A 86 TKERLAELDTLYDFIFSA-E------TPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREK-------- 149 (253)
T ss_dssp HHHHGGGHHHHHHHHTSS-C------CCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHT--------
T ss_pred HHHHhhhHHHHHHHHhcC-C------CCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhc--------
Confidence 357888888888877765 3 35799999999999999988 6678999999999999998854320
Q ss_pred ccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHH-HHHHHHHHhc
Q psy3185 173 YPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIV-SFIETIFNIL 251 (298)
Q Consensus 173 ~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~-~yl~~I~~~L 251 (298)
..++.+..+|+....+ +++||+|+..-.++..++.. ...-.+.+.|
T Consensus 150 --------------------------------g~~~~~~v~D~~~~~~-~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL 196 (253)
T 3frh_A 150 --------------------------------DWDFTFALQDVLCAPP-AEAGDLALIFKLLPLLEREQAGSAMALLQSL 196 (253)
T ss_dssp --------------------------------TCEEEEEECCTTTSCC-CCBCSEEEEESCHHHHHHHSTTHHHHHHHHC
T ss_pred --------------------------------CCCceEEEeecccCCC-CCCcchHHHHHHHHHhhhhchhhHHHHHHHh
Confidence 1367788889877753 56999998875444443321 2344778899
Q ss_pred cCCeEEEEec
Q psy3185 252 KPGGIWINLG 261 (298)
Q Consensus 252 kpGG~~In~g 261 (298)
+|+|++|++.
T Consensus 197 ~~~~vvVsfP 206 (253)
T 3frh_A 197 NTPRMAVSFP 206 (253)
T ss_dssp BCSEEEEEEE
T ss_pred cCCCEEEEcC
Confidence 9999999863
No 228
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.16 E-value=1.7e-11 Score=111.21 Aligned_cols=99 Identities=9% Similarity=0.007 Sum_probs=70.2
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..++++ ..|+|+|+|+ |+..++. . | ++. .
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~------~-------~-------------------~~~-~ 118 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHE------V-------P-------------------RIT-E 118 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCC------C-------C-------------------CCC-C
T ss_pred CCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhh------h-------h-------------------hhh-h
Confidence 4679999999999999999999 7899999998 7422110 0 0 000 0
Q ss_pred CCCCCCCCCeeEE--eccccccccCCCceeEEEecccccCcch-------HHHHHHHHHHhccCCe--EEEE
Q psy3185 199 TSDYNDDCDFSMA--AGDFLQVYVHPNKWDCVATCFFIDCANN-------IVSFIETIFNILKPGG--IWIN 259 (298)
Q Consensus 199 ~~~~~~~~~~~~~--~gDf~~~~~~~~~fD~V~t~ffidta~n-------~~~yl~~I~~~LkpGG--~~In 259 (298)
....++.+. .+|+.++. +++||+|++.+. +...+ ....++.+.++||||| .++.
T Consensus 119 ----~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 119 ----SYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp ----BTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ----ccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 001267788 89998874 679999998754 32211 1237899999999999 8874
No 229
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.14 E-value=4.1e-10 Score=102.84 Aligned_cols=144 Identities=19% Similarity=0.126 Sum_probs=100.6
Q ss_pred hccCChHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhh
Q psy3185 88 WSEEGSEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCRE 166 (298)
Q Consensus 88 Ws~~g~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~ 166 (298)
|+..-..||. .+.+.+. ++.+|||+|||+|.++..+|++|. .|+|+|+|+.++..++.-...
T Consensus 108 f~~~~~~er~--------ri~~~~~------~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~--- 170 (278)
T 3k6r_A 108 FSPANVKERV--------RMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHL--- 170 (278)
T ss_dssp CCGGGHHHHH--------HHHHHCC------TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHH---
T ss_pred EcCCcHHHHH--------HHHHhcC------CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHH---
Confidence 7776667775 2333443 367999999999999999999985 799999999999887762211
Q ss_pred ccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHH
Q psy3185 167 KNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIET 246 (298)
Q Consensus 167 ~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~ 246 (298)
| .+ ...+.+..+|..++. ..+.||.|+... .+.-.++++.
T Consensus 171 -N--------------------------------~v--~~~v~~~~~D~~~~~-~~~~~D~Vi~~~----p~~~~~~l~~ 210 (278)
T 3k6r_A 171 -N--------------------------------KV--EDRMSAYNMDNRDFP-GENIADRILMGY----VVRTHEFIPK 210 (278)
T ss_dssp -T--------------------------------TC--TTTEEEECSCTTTCC-CCSCEEEEEECC----CSSGGGGHHH
T ss_pred -c--------------------------------CC--CCcEEEEeCcHHHhc-cccCCCEEEECC----CCcHHHHHHH
Confidence 0 01 136788999988875 468999887543 2233467888
Q ss_pred HHHhccCCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEE
Q psy3185 247 IFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 247 I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~ 295 (298)
..++|||||++.. |.+... .....-..+.+.++++..|+++.
T Consensus 211 a~~~lk~gG~ih~-----~~~~~e--~~~~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 211 ALSIAKDGAIIHY-----HNTVPE--KLMPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp HHHHEEEEEEEEE-----EEEEEG--GGTTTTTHHHHHHHHHHTTCEEE
T ss_pred HHHHcCCCCEEEE-----Eeeecc--cccchhHHHHHHHHHHHcCCcEE
Confidence 8899999996541 222210 01122346888999999999875
No 230
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.14 E-value=2.3e-10 Score=108.78 Aligned_cols=129 Identities=17% Similarity=0.238 Sum_probs=93.2
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~ 178 (298)
.+.+.+.+.+.. .++.+|||||||+|.++..++++ +..++|+|+++.|+..|
T Consensus 26 ~l~~~~~~~~~~----~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------------- 80 (421)
T 2ih2_A 26 EVVDFMVSLAEA----PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------------- 80 (421)
T ss_dssp HHHHHHHHHCCC----CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------------
T ss_pred HHHHHHHHhhcc----CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------------
Confidence 467777777652 23569999999999999999984 57899999999876422
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEec--ccccCc---------ch--------
Q psy3185 179 TDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC--FFIDCA---------NN-------- 239 (298)
Q Consensus 179 ~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~--ffidta---------~n-------- 239 (298)
.++.+..+|+.+.. ..++||+|++. |+-... ++
T Consensus 81 ---------------------------~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~ 132 (421)
T 2ih2_A 81 ---------------------------PWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKA 132 (421)
T ss_dssp ---------------------------TTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHH
T ss_pred ---------------------------CCCcEEeCChhhcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHh
Confidence 14668889988764 35789999995 321111 11
Q ss_pred ----------HHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCC
Q psy3185 240 ----------IVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGF 292 (298)
Q Consensus 240 ----------~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF 292 (298)
...+++.+.++|||||.++-+-|-.|.+.. +.+++++.+.+.|+
T Consensus 133 ~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~---------~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 133 FSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLE---------DFALLREFLAREGK 186 (421)
T ss_dssp CTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCG---------GGHHHHHHHHHHSE
T ss_pred hhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCc---------cHHHHHHHHHhcCC
Confidence 125789999999999999877775443321 25788888888777
No 231
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.13 E-value=9e-11 Score=99.63 Aligned_cols=91 Identities=13% Similarity=0.191 Sum_probs=65.1
Q ss_pred CCCeEEEecccCcHHHHHHHHc-C----------CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-G----------YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHH 187 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G----------~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~ 187 (298)
++.+|||+|||+|.++..++++ | ..|+|+|+|+.+. .
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~--------~------------------------ 69 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP--------L------------------------ 69 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC--------C------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc--------C------------------------
Confidence 4679999999999999999987 5 6899999998320 0
Q ss_pred cccccccCCCCCCCCCCCCCeeEE-eccccccc--------cCCCceeEEEecccccC----cchH-------HHHHHHH
Q psy3185 188 QTMAVTFPDINTSDYNDDCDFSMA-AGDFLQVY--------VHPNKWDCVATCFFIDC----ANNI-------VSFIETI 247 (298)
Q Consensus 188 ~~r~~~ipd~~~~~~~~~~~~~~~-~gDf~~~~--------~~~~~fD~V~t~ffidt----a~n~-------~~yl~~I 247 (298)
.++.+. .+|+.+.. .++++||+|++.+.++. ..+. ...++++
T Consensus 70 ------------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 131 (196)
T 2nyu_A 70 ------------------EGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVT 131 (196)
T ss_dssp ------------------TTCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHH
Confidence 133445 55654432 12468999998654332 1122 4789999
Q ss_pred HHhccCCeEEEE
Q psy3185 248 FNILKPGGIWIN 259 (298)
Q Consensus 248 ~~~LkpGG~~In 259 (298)
.++|||||.++.
T Consensus 132 ~~~LkpgG~lv~ 143 (196)
T 2nyu_A 132 PDILQPGGTFLC 143 (196)
T ss_dssp HHHEEEEEEEEE
T ss_pred HHHhcCCCEEEE
Confidence 999999999985
No 232
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.11 E-value=4.9e-10 Score=107.09 Aligned_cols=99 Identities=14% Similarity=0.155 Sum_probs=72.7
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|.++..+|+.|..|+|+|+|+.|+..++.-+...
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~n----------------------------------- 259 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRL----------------------------------- 259 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----------------------------------
T ss_pred CCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHh-----------------------------------
Confidence 679999999999999999999999999999999999887632210
Q ss_pred CCCCCCCCeeEEeccccccccC-CCceeEEEec--cccc-------CcchHHHHHHHHHHhccCCeEEE
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYVH-PNKWDCVATC--FFID-------CANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~~-~~~fD~V~t~--ffid-------ta~n~~~yl~~I~~~LkpGG~~I 258 (298)
.+ ...+..+|..++... .+.||+|++. +|.. ......++++.+.++|||||+++
T Consensus 260 -g~----~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv 323 (393)
T 4dmg_A 260 -GL----RVDIRHGEALPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLW 323 (393)
T ss_dssp -TC----CCEEEESCHHHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred -CC----CCcEEEccHHHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 00 113457887765321 3459999863 1221 12345678888999999999987
No 233
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.10 E-value=4.1e-10 Score=107.19 Aligned_cols=103 Identities=17% Similarity=0.125 Sum_probs=77.9
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+|||+|||+|.++..+|+.|. .|+|+|+|+.|+..++.-... +
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~----n----------------------------- 263 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKL----N----------------------------- 263 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T-----------------------------
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH----c-----------------------------
Confidence 367999999999999999999986 799999999999988763221 0
Q ss_pred CCCCCCCCCCeeEEecccccccc----CCCceeEEEec--cccc-------CcchHHHHHHHHHHhccCCeEEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV----HPNKWDCVATC--FFID-------CANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~----~~~~fD~V~t~--ffid-------ta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.+ ..++.+..+|+.++.. ..++||+|++. +|.. .......++..+.++|||||+++-
T Consensus 264 ---~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 333 (396)
T 2as0_A 264 ---GV--EDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVT 333 (396)
T ss_dssp ---TC--GGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ---CC--CccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 00 0267889999877643 25789999873 2221 124566789999999999998874
No 234
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.09 E-value=1.6e-09 Score=105.07 Aligned_cols=128 Identities=12% Similarity=0.055 Sum_probs=88.5
Q ss_pred CCCeEEEecccCcHHHHHHHHc--C-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--G-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|..+..+|.. + ..|+|+|.|+.|+..++..+.+.
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~------------------------------- 307 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM------------------------------- 307 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT-------------------------------
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc-------------------------------
Confidence 4679999999999999999985 3 68999999999999887643321
Q ss_pred CCCCCCCCCCCCeeEEeccccccc--cCCCceeEEEe---c--c-cccCcchH----------------HHHHHHHHHhc
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVY--VHPNKWDCVAT---C--F-FIDCANNI----------------VSFIETIFNIL 251 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~--~~~~~fD~V~t---~--f-fidta~n~----------------~~yl~~I~~~L 251 (298)
.+ .++.+..+|+.++. ..+++||+|++ | . .+...+++ ...++.+.++|
T Consensus 308 -----g~---~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L 379 (450)
T 2yxl_A 308 -----GI---KIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLV 379 (450)
T ss_dssp -----TC---CSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTE
T ss_pred -----CC---CcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 00 25778888887764 23378999885 2 2 23322222 57899999999
Q ss_pred cCCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhC-CCEEE
Q psy3185 252 KPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGL-GFVYE 295 (298)
Q Consensus 252 kpGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~-GF~i~ 295 (298)
||||.++-...-. +. +=+.+.+..++++. ||+++
T Consensus 380 kpGG~lvy~tcs~-~~---------~ene~~v~~~l~~~~~~~~~ 414 (450)
T 2yxl_A 380 KPGGRLLYTTCSI-FK---------EENEKNIRWFLNVHPEFKLV 414 (450)
T ss_dssp EEEEEEEEEESCC-CG---------GGTHHHHHHHHHHCSSCEEC
T ss_pred CCCcEEEEEeCCC-Ch---------hhHHHHHHHHHHhCCCCEEe
Confidence 9999997322111 11 11245677777775 78764
No 235
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.08 E-value=9.9e-10 Score=98.00 Aligned_cols=109 Identities=17% Similarity=0.220 Sum_probs=76.6
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+++.+.+..+. .++.+|||+|||+|.++..|+++|..|+|+|+|+.|+..++..+.
T Consensus 18 ~~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~-------------------- 73 (244)
T 1qam_A 18 NIDKIMTNIRL----NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLV-------------------- 73 (244)
T ss_dssp HHHHHHTTCCC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTT--------------------
T ss_pred HHHHHHHhCCC----CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhc--------------------
Confidence 66777766643 246799999999999999999999999999999999998875211
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCC-CceeEEEec-ccccCcchHHHHH--------------HH
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHP-NKWDCVATC-FFIDCANNIVSFI--------------ET 246 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~-~~fD~V~t~-ffidta~n~~~yl--------------~~ 246 (298)
...++.+..||+.++..++ ..|++|... |.+.+ +-+...+ +.
T Consensus 74 ---------------------~~~~v~~~~~D~~~~~~~~~~~~~vv~nlPy~~~~-~~l~~~l~~~~~~~~~lm~q~e~ 131 (244)
T 1qam_A 74 ---------------------DHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNIST-DIIRKIVFDSIADEIYLIVEYGF 131 (244)
T ss_dssp ---------------------TCCSEEEECCCGGGCCCCSSCCCEEEEECCGGGHH-HHHHHHHHSCCCSEEEEEEEHHH
T ss_pred ---------------------cCCCeEEEEChHHhCCcccCCCeEEEEeCCcccCH-HHHHHHHhcCCCCeEEEEEEHHH
Confidence 0137889999998876543 456544432 33321 1122222 55
Q ss_pred HHHhccCCeEE
Q psy3185 247 IFNILKPGGIW 257 (298)
Q Consensus 247 I~~~LkpGG~~ 257 (298)
..++|+|||.+
T Consensus 132 a~rll~~~G~l 142 (244)
T 1qam_A 132 AKRLLNTKRSL 142 (244)
T ss_dssp HHHHTCTTSHH
T ss_pred HHHHhcCCcch
Confidence 88899998854
No 236
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.07 E-value=5.5e-10 Score=102.67 Aligned_cols=108 Identities=16% Similarity=0.115 Sum_probs=72.9
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+++.+.+..+. .++.+|||+|||+|.++..|+++|..|+|+|+|+.|+..++......
T Consensus 30 i~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~------------------ 87 (299)
T 2h1r_A 30 ILDKIIYAAKI----KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYE------------------ 87 (299)
T ss_dssp HHHHHHHHHCC----CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHhcCC----CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc------------------
Confidence 44444444432 24679999999999999999999999999999999999887633210
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCc-chHHHHH---------------HH
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCA-NNIVSFI---------------ET 246 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta-~n~~~yl---------------~~ 246 (298)
. ..++.+..||+.++.. ++||+|++..-.... +.+...+ +.
T Consensus 88 ------------------~---~~~v~~~~~D~~~~~~--~~~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~ 144 (299)
T 2h1r_A 88 ------------------G---YNNLEVYEGDAIKTVF--PKFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEF 144 (299)
T ss_dssp ------------------T---CCCEEC----CCSSCC--CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHH
T ss_pred ------------------C---CCceEEEECchhhCCc--ccCCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHH
Confidence 0 0367888999987743 489999886433322 2234444 45
Q ss_pred HHHhccCCe
Q psy3185 247 IFNILKPGG 255 (298)
Q Consensus 247 I~~~LkpGG 255 (298)
..++++|+|
T Consensus 145 a~rlla~~G 153 (299)
T 2h1r_A 145 AERMLANVG 153 (299)
T ss_dssp HHHHTCCTT
T ss_pred HHHHhcCCC
Confidence 778999877
No 237
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.06 E-value=4.2e-10 Score=106.77 Aligned_cols=101 Identities=15% Similarity=0.053 Sum_probs=76.9
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|.++..+|+.+..|+|+|+|+.|+..++.-... +
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~----n------------------------------- 254 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARL----N------------------------------- 254 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHH----T-------------------------------
T ss_pred CCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHH----c-------------------------------
Confidence 56899999999999999999877899999999999988763221 0
Q ss_pred CCCCCCCCeeEEeccccccccC----CCceeEEEec--ccc-------cCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYVH----PNKWDCVATC--FFI-------DCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~~----~~~fD~V~t~--ffi-------dta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.+ .++.+..+|+.++... .++||+|++. +|- +.......++..+.++|||||+++.
T Consensus 255 -~~---~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 323 (382)
T 1wxx_A 255 -GL---GNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILAT 323 (382)
T ss_dssp -TC---TTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred -CC---CCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 00 2478899998776432 5789999863 111 1124556789999999999999874
No 238
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.05 E-value=6.2e-10 Score=103.91 Aligned_cols=116 Identities=11% Similarity=0.095 Sum_probs=84.0
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|.++.. |+.+..|+|+|.|+.|+..++.-+.. +
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~----n------------------------------- 239 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKL----N------------------------------- 239 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHH----T-------------------------------
T ss_pred CCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHH----c-------------------------------
Confidence 67999999999999999 98667899999999999988763221 0
Q ss_pred CCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCCC
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPS 279 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ls 279 (298)
.+ ..++.+..+|+.++. ++||+|+.. ......++++.+.++|+|||+++... +. +.
T Consensus 240 -~l--~~~v~~~~~D~~~~~---~~fD~Vi~d----pP~~~~~~l~~~~~~L~~gG~l~~~~-----~~-----~~---- 295 (336)
T 2yx1_A 240 -KL--EHKIIPILSDVREVD---VKGNRVIMN----LPKFAHKFIDKALDIVEEGGVIHYYT-----IG-----KD---- 295 (336)
T ss_dssp -TC--TTTEEEEESCGGGCC---CCEEEEEEC----CTTTGGGGHHHHHHHEEEEEEEEEEE-----EE-----SS----
T ss_pred -CC--CCcEEEEECChHHhc---CCCcEEEEC----CcHhHHHHHHHHHHHcCCCCEEEEEE-----ee-----cC----
Confidence 01 136889999998875 789999864 22223478999999999999876321 11 11
Q ss_pred HHHHHHHHHhC-CCEEE
Q psy3185 280 YEVVKQVIQGL-GFVYE 295 (298)
Q Consensus 280 ~eEl~~~~~~~-GF~i~ 295 (298)
.+++.+.+.+. ||++.
T Consensus 296 ~~~~~~~l~~~~~~~i~ 312 (336)
T 2yx1_A 296 FDKAIKLFEKKCDCEVL 312 (336)
T ss_dssp SHHHHHHHHHHSEEEEE
T ss_pred chHHHHHHHHhcCCcEE
Confidence 34555666655 77754
No 239
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.05 E-value=6e-10 Score=100.68 Aligned_cols=153 Identities=10% Similarity=0.089 Sum_probs=107.9
Q ss_pred ChHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccc
Q psy3185 92 GSEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNV 169 (298)
Q Consensus 92 g~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~ 169 (298)
.-.||-++|+++...+...++ ...+|||+|||+|-|+..++... ..++|+|++..|+..++..+...
T Consensus 111 STreRLp~lD~fY~~i~~~i~------~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~----- 179 (281)
T 3lcv_B 111 STRERLPHLDEFYRELFRHLP------RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL----- 179 (281)
T ss_dssp HHHHHGGGHHHHHHHHGGGSC------CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT-----
T ss_pred CHHHHhHhHHHHHHHHHhccC------CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc-----
Confidence 346888999999888888775 25699999999999999998873 57999999999999988754320
Q ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHH-HHHHHH
Q psy3185 170 YKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVS-FIETIF 248 (298)
Q Consensus 170 ~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~-yl~~I~ 248 (298)
+....+..+|+..-. ..++||+|++.-.|+..++... ..-.+.
T Consensus 180 -----------------------------------g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~~ll 223 (281)
T 3lcv_B 180 -----------------------------------NVPHRTNVADLLEDR-LDEPADVTLLLKTLPCLETQQRGSGWEVI 223 (281)
T ss_dssp -----------------------------------TCCEEEEECCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHHHHH
T ss_pred -----------------------------------CCCceEEEeeecccC-CCCCcchHHHHHHHHHhhhhhhHHHHHHH
Confidence 124677888887654 4689999998877766554321 333899
Q ss_pred HhccCCeEEEEeccccccccCCCC-CCcc-CCCHHHHHHHHHhCCCEEEE
Q psy3185 249 NILKPGGIWINLGPLLYHYSNMLN-EDSI-EPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 249 ~~LkpGG~~In~gPl~y~~~~~~~-~~~~-~ls~eEl~~~~~~~GF~i~~ 296 (298)
..|+|||++||+.- ....+ .+.+ +.-.+.+.+.+...|+.+.+
T Consensus 224 ~aL~~~~vvVSfp~-----ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~ 268 (281)
T 3lcv_B 224 DIVNSPNIVVTFPT-----KSLGQRSKGMFQNYSQSFESQARERSCRIQR 268 (281)
T ss_dssp HHSSCSEEEEEEEC-----C-------CHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHhCCCCEEEeccc-----hhhcCCCcchhhHHHHHHHHHHHhcCCceee
Confidence 99999999998621 10101 0111 12246667777777775543
No 240
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.04 E-value=6.6e-10 Score=105.82 Aligned_cols=103 Identities=15% Similarity=0.134 Sum_probs=78.2
Q ss_pred CCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
+.+|||+|||+|.++..+|+.|. .|+|+|+|+.|+..++.-... +
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~----n------------------------------ 266 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVEL----N------------------------------ 266 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T------------------------------
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----c------------------------------
Confidence 56999999999999999999985 799999999999988763221 0
Q ss_pred CCCCCCCCCeeEEeccccccccC----CCceeEEEec--cc-------ccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVH----PNKWDCVATC--FF-------IDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~----~~~fD~V~t~--ff-------idta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.++ ..++.+..+|+.++... .++||+|++. +| .+.......++..+.++|||||+++.
T Consensus 267 --gl~-~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 337 (396)
T 3c0k_A 267 --KLD-LSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLT 337 (396)
T ss_dssp --TCC-GGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEE
T ss_pred --CCC-ccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 000 02678899998776431 4689998874 11 22335677899999999999999873
No 241
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.03 E-value=1e-09 Score=102.50 Aligned_cols=125 Identities=19% Similarity=0.180 Sum_probs=87.4
Q ss_pred CCCeEEEecccCcHHHHHHHHcC-------CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG-------YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMA 191 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G-------~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~ 191 (298)
++.+|||||||+|.++..+++.. ..++|+|+|+.|+..|+..+...
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~--------------------------- 182 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ--------------------------- 182 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH---------------------------
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC---------------------------
Confidence 45799999999999999998774 67999999999999887632210
Q ss_pred cccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEeccc---ccC--------------cchH-HHHHHHHHHhccC
Q psy3185 192 VTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFF---IDC--------------ANNI-VSFIETIFNILKP 253 (298)
Q Consensus 192 ~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ff---idt--------------a~n~-~~yl~~I~~~Lkp 253 (298)
. .++.+..||+.... ..++||+|++.-- +.. ..+. ..+++.+.+.|||
T Consensus 183 ---------g----~~~~i~~~D~l~~~-~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~ 248 (344)
T 2f8l_A 183 ---------R----QKMTLLHQDGLANL-LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKP 248 (344)
T ss_dssp ---------T----CCCEEEESCTTSCC-CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEE
T ss_pred ---------C----CCceEEECCCCCcc-ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCC
Confidence 0 13567788876643 3578999998721 211 1112 2589999999999
Q ss_pred CeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCE
Q psy3185 254 GGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFV 293 (298)
Q Consensus 254 GG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~ 293 (298)
||+++.+-|--+-.. -..+++++++.+.|+.
T Consensus 249 gG~~~~v~p~~~~~~---------~~~~~ir~~l~~~~~~ 279 (344)
T 2f8l_A 249 GGYLFFLVPDAMFGT---------SDFAKVDKFIKKNGHI 279 (344)
T ss_dssp EEEEEEEEEGGGGGS---------TTHHHHHHHHHHHEEE
T ss_pred CCEEEEEECchhcCC---------chHHHHHHHHHhCCeE
Confidence 999876655322111 1258888888887763
No 242
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.01 E-value=3.1e-09 Score=102.29 Aligned_cols=127 Identities=17% Similarity=0.084 Sum_probs=87.1
Q ss_pred CCCeEEEecccCcHHHHHHHHcC--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|..+..+|+.+ ..|+|+|.|+.|+..++..+.+.
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~-------------------------------- 293 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL-------------------------------- 293 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT--------------------------------
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc--------------------------------
Confidence 56799999999999999999985 58999999999999887643320
Q ss_pred CCCCCCCCCCCeeEEeccccccc--cCCCceeEEEe---cc---cccCcchH----------------HHHHHHHHHhcc
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVY--VHPNKWDCVAT---CF---FIDCANNI----------------VSFIETIFNILK 252 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~--~~~~~fD~V~t---~f---fidta~n~----------------~~yl~~I~~~Lk 252 (298)
+.++.+..+|+..+. ..+++||+|++ |. .+...+++ ...++.+.++||
T Consensus 294 --------g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lk 365 (429)
T 1sqg_A 294 --------GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK 365 (429)
T ss_dssp --------TCCCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEE
T ss_pred --------CCCeEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 013567788887764 23578999875 22 22222222 478999999999
Q ss_pred CCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhC-CCEEE
Q psy3185 253 PGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGL-GFVYE 295 (298)
Q Consensus 253 pGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~-GF~i~ 295 (298)
|||+++-...- ++. +=+.+.+...+++. +|+++
T Consensus 366 pGG~lvystcs-~~~---------~ene~~v~~~l~~~~~~~~~ 399 (429)
T 1sqg_A 366 TGGTLVYATCS-VLP---------EENSLQIKAFLQRTADAELC 399 (429)
T ss_dssp EEEEEEEEESC-CCG---------GGTHHHHHHHHHHCTTCEEC
T ss_pred CCCEEEEEECC-CCh---------hhHHHHHHHHHHhCCCCEEe
Confidence 99998742211 111 11245677777664 57664
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.99 E-value=2.2e-09 Score=109.66 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=78.6
Q ss_pred CCeEEEecccCcHHHHHHHHcCCe-EEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYV-CQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~-v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
+.+|||+|||+|.++..+|+.|.. |+|+|.|+.|+..++.-... +
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~----n------------------------------ 585 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL----N------------------------------ 585 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T------------------------------
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH----c------------------------------
Confidence 579999999999999999999875 99999999999988763221 0
Q ss_pred CCCCCCCCCeeEEecccccccc-CCCceeEEEec--cc---------ccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYV-HPNKWDCVATC--FF---------IDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~-~~~~fD~V~t~--ff---------idta~n~~~yl~~I~~~LkpGG~~In 259 (298)
.+. ..++.++.+|..++.. ..++||+|++. +| .+...+..+.++.+.++|||||+++.
T Consensus 586 --gl~-~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~ 655 (703)
T 3v97_A 586 --GLT-GRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 655 (703)
T ss_dssp --TCC-STTEEEEESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred --CCC-ccceEEEecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 000 1368899999887532 45799999873 22 22335567789999999999999983
No 244
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.99 E-value=2.3e-09 Score=103.66 Aligned_cols=119 Identities=18% Similarity=0.243 Sum_probs=81.6
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc---------------CCeEEEeeCCHHHHHHHHHHHhhhhh
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR---------------GYVCQGNEFSLFMLFASNFILNKCRE 166 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~---------------G~~v~g~D~S~~Ml~~a~~~l~~~~~ 166 (298)
+|++.+.+.+.+ ..+.+|||||||+|.+...+++. +..++|+|+++.|+..|+.-+..
T Consensus 158 ~v~~~mv~~l~~----~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l--- 230 (445)
T 2okc_A 158 PLIQAMVDCINP----QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL--- 230 (445)
T ss_dssp HHHHHHHHHHCC----CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHhCC----CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH---
Confidence 355555554432 24679999999999999998864 46799999999999988752211
Q ss_pred ccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEec--ccccCc-------
Q psy3185 167 KNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC--FFIDCA------- 237 (298)
Q Consensus 167 ~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~--ffidta------- 237 (298)
| .+ . ..+..+..||+..... .++||+|++. |.....
T Consensus 231 ----------~------------------g~-----~-~~~~~i~~gD~l~~~~-~~~fD~Iv~NPPf~~~~~~~~~~~~ 275 (445)
T 2okc_A 231 ----------H------------------GI-----G-TDRSPIVCEDSLEKEP-STLVDVILANPPFGTRPAGSVDINR 275 (445)
T ss_dssp ----------T------------------TC-----C-SSCCSEEECCTTTSCC-SSCEEEEEECCCSSCCCTTCCCCCC
T ss_pred ----------h------------------CC-----C-cCCCCEeeCCCCCCcc-cCCcCEEEECCCCCCcccccchhhH
Confidence 0 00 0 0145578888877643 3589999986 332111
Q ss_pred --------chHHHHHHHHHHhccCCeEEEEecc
Q psy3185 238 --------NNIVSFIETIFNILKPGGIWINLGP 262 (298)
Q Consensus 238 --------~n~~~yl~~I~~~LkpGG~~In~gP 262 (298)
..-..+++.+.++|||||.++.+-|
T Consensus 276 ~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 276 PDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp TTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 1124799999999999999976655
No 245
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.98 E-value=1.4e-10 Score=103.30 Aligned_cols=109 Identities=13% Similarity=0.172 Sum_probs=75.2
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+++.+.+.++. .++.+|||+|||+|.++..+++.|.+|+|+|+|+.|+..++...
T Consensus 17 ~~~~i~~~~~~----~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~--------------------- 71 (245)
T 1yub_A 17 VLNQIIKQLNL----KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKL--------------------- 71 (245)
T ss_dssp THHHHHHHCCC----CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTT---------------------
T ss_pred HHHHHHHhcCC----CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHh---------------------
Confidence 44555555542 24679999999999999999999999999999999986543200
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccC-CCceeEEEec--ccccCcchHH----------HHH----H
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVH-PNKWDCVATC--FFIDCANNIV----------SFI----E 245 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~-~~~fD~V~t~--ffidta~n~~----------~yl----~ 245 (298)
....++.+..+|+.++... +++| .|++. |.+. ..-+. .++ +
T Consensus 72 --------------------~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~-~~~~~~~~~~~~~~~~~lm~q~e 129 (245)
T 1yub_A 72 --------------------KLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLS-TQIIKKVVFESRASDIYLIVEEG 129 (245)
T ss_dssp --------------------TTCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSSC-HHHHHHHHHHCCCEEEEEEEESS
T ss_pred --------------------ccCCceEEEECChhhcCcccCCCc-EEEEeCCcccc-HHHHHHHHhCCCCCeEEEEeeHH
Confidence 0013788999999887654 3688 45543 3322 11112 233 7
Q ss_pred HHHHhccCCeEEE
Q psy3185 246 TIFNILKPGGIWI 258 (298)
Q Consensus 246 ~I~~~LkpGG~~I 258 (298)
.+.++|||||.+.
T Consensus 130 ~a~rll~~~G~l~ 142 (245)
T 1yub_A 130 FYKRTLDIHRTLG 142 (245)
T ss_dssp HHHHHHCGGGSHH
T ss_pred HHHHHhCCCCchh
Confidence 7999999999875
No 246
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.97 E-value=6.1e-10 Score=102.88 Aligned_cols=97 Identities=11% Similarity=0.056 Sum_probs=67.9
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeC----CHHHHHHHHHHHhhhhhcccccccccccccccccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEF----SLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTF 194 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~----S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~i 194 (298)
++.+|||+|||+|.++..+|++ ..|+|+|. |+.|+... .
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~-----~------------------------------- 124 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPI-----P------------------------------- 124 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCC-----C-------------------------------
T ss_pred CCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHH-----H-------------------------------
Confidence 4679999999999999999999 48999999 55443100 0
Q ss_pred CCCCCCCCCCCCCeeEEec-cccccccCCCceeEEEecccccCc---ch---HHHHHHHHHHhccCCeEEEE
Q psy3185 195 PDINTSDYNDDCDFSMAAG-DFLQVYVHPNKWDCVATCFFIDCA---NN---IVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 195 pd~~~~~~~~~~~~~~~~g-Df~~~~~~~~~fD~V~t~ffidta---~n---~~~yl~~I~~~LkpGG~~In 259 (298)
..+ .. ..++.+..+ |+.+++ .++||+|++.+...+. .+ ....|+.+.++|||||.++.
T Consensus 125 --~~~--~~-~~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 125 --MST--YG-WNLVRLQSGVDVFFIP--PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp --CCS--TT-GGGEEEECSCCTTTSC--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred --hhh--cC-CCCeEEEeccccccCC--cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 000 00 136788888 888764 5689999986433211 11 12578889999999999874
No 247
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.97 E-value=3.9e-09 Score=102.64 Aligned_cols=129 Identities=13% Similarity=0.095 Sum_probs=90.6
Q ss_pred CCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|..+..||.+ +..|+|+|+|+.|+..++..+.+..
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g------------------------------ 154 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG------------------------------ 154 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC------------------------------
Confidence 4679999999999999999976 3589999999999998877433210
Q ss_pred CCCCCCCCCCCCeeEEecccccccc-CCCceeEEEe---cc---cccCcch----------------HHHHHHHHHHhcc
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYV-HPNKWDCVAT---CF---FIDCANN----------------IVSFIETIFNILK 252 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~-~~~~fD~V~t---~f---fidta~n----------------~~~yl~~I~~~Lk 252 (298)
+ .++.++.+|..++.. .+++||+|++ |. .+...++ ..+.|+.+.++||
T Consensus 155 ------~---~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk 225 (456)
T 3m4x_A 155 ------V---SNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLK 225 (456)
T ss_dssp ------C---SSEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEE
T ss_pred ------C---CceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 267788899877642 3579999875 21 1111111 2378999999999
Q ss_pred CCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 253 PGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 253 pGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
|||++| |.+.. ...+=+.+.+..++++.||+++.
T Consensus 226 pGG~Lv------YsTCs----~~~eEne~vv~~~l~~~~~~l~~ 259 (456)
T 3m4x_A 226 NKGQLI------YSTCT----FAPEENEEIISWLVENYPVTIEE 259 (456)
T ss_dssp EEEEEE------EEESC----CCGGGTHHHHHHHHHHSSEEEEC
T ss_pred CCcEEE------EEEee----cccccCHHHHHHHHHhCCCEEEe
Confidence 999987 32221 01112367788888888888764
No 248
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.96 E-value=3.2e-09 Score=103.44 Aligned_cols=128 Identities=16% Similarity=0.136 Sum_probs=87.9
Q ss_pred CCCeEEEecccCcHHHHHHHHc-C--CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-G--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|..+..||++ + ..|+|+|+|+.|+..++..+.+.
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~------------------------------- 149 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW------------------------------- 149 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH-------------------------------
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4679999999999999999976 2 57999999999999887743321
Q ss_pred CCCCCCCCCCCCeeEEecccccccc-CCCceeEEEe---c--c-cccCcc---------h-------HHHHHHHHHHhcc
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYV-HPNKWDCVAT---C--F-FIDCAN---------N-------IVSFIETIFNILK 252 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~-~~~~fD~V~t---~--f-fidta~---------n-------~~~yl~~I~~~Lk 252 (298)
.- . +.++.+|+.++.. .+++||+|++ | . .+...+ + ..+.++.+.++||
T Consensus 150 -------G~-~-v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk 220 (464)
T 3m6w_A 150 -------GA-P-LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLG 220 (464)
T ss_dssp -------CC-C-CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEE
T ss_pred -------CC-e-EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 00 2 6678888877652 3679999874 2 1 111111 1 2678999999999
Q ss_pred CCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhC-CCEEEE
Q psy3185 253 PGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGL-GFVYEV 296 (298)
Q Consensus 253 pGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~-GF~i~~ 296 (298)
|||++| |.+.. ...+=+.+.+..++++. +|+++.
T Consensus 221 pGG~Lv------ysTCs----~~~eEne~vv~~~l~~~~~~~l~~ 255 (464)
T 3m6w_A 221 PGGVLV------YSTCT----FAPEENEGVVAHFLKAHPEFRLED 255 (464)
T ss_dssp EEEEEE------EEESC----CCGGGTHHHHHHHHHHCTTEEEEC
T ss_pred CCcEEE------EEecc----CchhcCHHHHHHHHHHCCCcEEEe
Confidence 999987 22211 01112466677777776 687753
No 249
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.95 E-value=3.5e-09 Score=97.44 Aligned_cols=85 Identities=19% Similarity=0.147 Sum_probs=68.0
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+++.+.+.... .++.+|||+|||+|.++..|++++..|+|+|+|+.|+..++..+..
T Consensus 38 i~~~Iv~~l~~----~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~------------------- 94 (295)
T 3gru_A 38 FVNKAVESANL----TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL------------------- 94 (295)
T ss_dssp HHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHH-------------------
T ss_pred HHHHHHHhcCC----CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhcc-------------------
Confidence 55666665542 2467999999999999999999999999999999999988763321
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecc
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCF 232 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~f 232 (298)
..++.++.||+.++..++..||+|+++.
T Consensus 95 ----------------------~~~v~vi~gD~l~~~~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 95 ----------------------YNNIEIIWGDALKVDLNKLDFNKVVANL 122 (295)
T ss_dssp ----------------------CSSEEEEESCTTTSCGGGSCCSEEEEEC
T ss_pred ----------------------CCCeEEEECchhhCCcccCCccEEEEeC
Confidence 1378899999998866667899998764
No 250
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.94 E-value=7.8e-09 Score=101.13 Aligned_cols=101 Identities=19% Similarity=0.280 Sum_probs=75.7
Q ss_pred CCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|..+..||++ +..|+|+|+|+.|+..++..+.+..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g------------------------------ 166 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG------------------------------ 166 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT------------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC------------------------------
Confidence 4679999999999999999986 3689999999999998877433210
Q ss_pred CCCCCCCCCCCCeeEEecccccccc-CCCceeEEEe---cc---cccCcc----------------hHHHHHHHHHHhcc
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYV-HPNKWDCVAT---CF---FIDCAN----------------NIVSFIETIFNILK 252 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~-~~~~fD~V~t---~f---fidta~----------------n~~~yl~~I~~~Lk 252 (298)
+ .++.++.+|+.++.. .+++||+|++ |. .+...+ ...+.|+.+.++||
T Consensus 167 ------~---~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk 237 (479)
T 2frx_A 167 ------I---SNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALR 237 (479)
T ss_dssp ------C---CSEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred ------C---CcEEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcC
Confidence 0 257788899887653 4578999876 32 121111 12468999999999
Q ss_pred CCeEEE
Q psy3185 253 PGGIWI 258 (298)
Q Consensus 253 pGG~~I 258 (298)
|||+++
T Consensus 238 pGG~Lv 243 (479)
T 2frx_A 238 PGGTLV 243 (479)
T ss_dssp EEEEEE
T ss_pred CCCEEE
Confidence 999987
No 251
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.85 E-value=1e-08 Score=96.64 Aligned_cols=108 Identities=15% Similarity=0.201 Sum_probs=75.8
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+||++|||+|.++.++++.+. .|+++|+++.|+..|+.-+. ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~---------------------------------~l 234 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMR---------------------------------KT 234 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCC---------------------------------C-
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH---------------------------------Hh
Confidence 567999999999999999999874 69999999999999886211 10
Q ss_pred CCCCC--CCCCCeeEEecccccccc----CCCceeEEEecccc-c--Ccc-hH--HHHHHHH----HHhccCCeEEEE
Q psy3185 198 NTSDY--NDDCDFSMAAGDFLQVYV----HPNKWDCVATCFFI-D--CAN-NI--VSFIETI----FNILKPGGIWIN 259 (298)
Q Consensus 198 ~~~~~--~~~~~~~~~~gDf~~~~~----~~~~fD~V~t~ffi-d--ta~-n~--~~yl~~I----~~~LkpGG~~In 259 (298)
....+ |...++.++.+|..++.. ..++||+|++-.+- . ..+ .+ .++++.+ .++|+|||+++.
T Consensus 235 ~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~ 312 (364)
T 2qfm_A 235 CGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 312 (364)
T ss_dssp ---CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 00000 111368999999988754 35789998764321 1 111 11 4677777 899999999874
No 252
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.85 E-value=1.5e-08 Score=96.35 Aligned_cols=113 Identities=12% Similarity=0.124 Sum_probs=81.4
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcC----------------------------------------
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRG---------------------------------------- 141 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G---------------------------------------- 141 (298)
.+...|....+. .++.+|||||||+|.++.++|..+
T Consensus 182 ~lAa~ll~~~~~----~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 182 TLAAGLIYLTPW----KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp HHHHHHHHTSCC----CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred HHHHHHHHhhCC----CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 355666665543 246799999999999999999875
Q ss_pred CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccC
Q psy3185 142 YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVH 221 (298)
Q Consensus 142 ~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~ 221 (298)
..|+|+|+|+.|+..|+.-+.... + ..++.+..+|+.++..
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~g------------------------------------l--~~~i~~~~~D~~~l~~- 298 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAG------------------------------------V--DEYIEFNVGDATQFKS- 298 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHT------------------------------------C--GGGEEEEECCGGGCCC-
T ss_pred ceEEEEECCHHHHHHHHHHHHHcC------------------------------------C--CCceEEEECChhhcCc-
Confidence 459999999999999987332110 0 1267899999998864
Q ss_pred CCceeEEEec--cc--ccCcchHHHHHHHHHHhccC--CeEE
Q psy3185 222 PNKWDCVATC--FF--IDCANNIVSFIETIFNILKP--GGIW 257 (298)
Q Consensus 222 ~~~fD~V~t~--ff--idta~n~~~yl~~I~~~Lkp--GG~~ 257 (298)
+++||+|++. |. +...+++....+.+.+.||+ ||..
T Consensus 299 ~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~ 340 (385)
T 3ldu_A 299 EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSY 340 (385)
T ss_dssp SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEE
T ss_pred CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEE
Confidence 4699999985 43 22335566777778888886 6544
No 253
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.84 E-value=6.7e-09 Score=95.33 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=75.1
Q ss_pred CCCeEEEecccC------cHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccc
Q psy3185 119 KDVNILVPGAGL------GRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQT 189 (298)
Q Consensus 119 ~~~~VLdpGcG~------Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~ 189 (298)
++.+|||+|||+ |. ..++++ +..|+|+|+|+. +
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------v----------------------------- 104 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------V----------------------------- 104 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------B-----------------------------
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------C-----------------------------
Confidence 467999999944 65 333433 478999999975 1
Q ss_pred cccccCCCCCCCCCCCCCeeE-EeccccccccCCCceeEEEecccc--------cC---cchHHHHHHHHHHhccCCeEE
Q psy3185 190 MAVTFPDINTSDYNDDCDFSM-AAGDFLQVYVHPNKWDCVATCFFI--------DC---ANNIVSFIETIFNILKPGGIW 257 (298)
Q Consensus 190 r~~~ipd~~~~~~~~~~~~~~-~~gDf~~~~~~~~~fD~V~t~ffi--------dt---a~n~~~yl~~I~~~LkpGG~~ 257 (298)
.++.+ +.||+.++.. .++||+|++.... +. ..-....++.++++|||||.+
T Consensus 105 ----------------~~v~~~i~gD~~~~~~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~ 167 (290)
T 2xyq_A 105 ----------------SDADSTLIGDCATVHT-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSI 167 (290)
T ss_dssp ----------------CSSSEEEESCGGGCCC-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEE
T ss_pred ----------------CCCEEEEECccccCCc-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEE
Confidence 03446 8889887653 4789999986432 11 222457899999999999999
Q ss_pred EEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEE
Q psy3185 258 INLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 258 In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~ 295 (298)
+... +... ..+++..++++.||..+
T Consensus 168 v~~~---~~~~----------~~~~l~~~l~~~GF~~v 192 (290)
T 2xyq_A 168 AVKI---TEHS----------WNADLYKLMGHFSWWTA 192 (290)
T ss_dssp EEEE---CSSS----------CCHHHHHHHTTEEEEEE
T ss_pred EEEE---eccC----------CHHHHHHHHHHcCCcEE
Confidence 8532 1111 13588999999999754
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.84 E-value=1.8e-08 Score=96.16 Aligned_cols=113 Identities=9% Similarity=0.018 Sum_probs=80.1
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC----------------------------------------
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY---------------------------------------- 142 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~---------------------------------------- 142 (298)
+...+...... .++..|||||||+|.++.+.|..+.
T Consensus 189 lAa~ll~l~~~----~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 264 (393)
T 3k0b_A 189 MAAALVLLTSW----HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL 264 (393)
T ss_dssp HHHHHHHHSCC----CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHhCC----CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc
Confidence 55555555443 2467899999999999999998754
Q ss_pred eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCC
Q psy3185 143 VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHP 222 (298)
Q Consensus 143 ~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~ 222 (298)
.|+|+|+|+.|+..|+.-+... .+ ...+.+..+|+.++.. +
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~------------------------------------gl--~~~I~~~~~D~~~~~~-~ 305 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEA------------------------------------GL--GDLITFRQLQVADFQT-E 305 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHT------------------------------------TC--TTCSEEEECCGGGCCC-C
T ss_pred eEEEEECCHHHHHHHHHHHHHc------------------------------------CC--CCceEEEECChHhCCC-C
Confidence 3999999999999988732210 00 1357899999998864 4
Q ss_pred CceeEEEec--cccc--CcchHHHHHHHHHHhccC--CeEEE
Q psy3185 223 NKWDCVATC--FFID--CANNIVSFIETIFNILKP--GGIWI 258 (298)
Q Consensus 223 ~~fD~V~t~--ffid--ta~n~~~yl~~I~~~Lkp--GG~~I 258 (298)
++||+|++. |... ...++....+.+.+.||+ ||...
T Consensus 306 ~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 347 (393)
T 3k0b_A 306 DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVY 347 (393)
T ss_dssp CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEE
T ss_pred CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEE
Confidence 699999998 5432 234566667777777776 66543
No 255
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.84 E-value=8.9e-09 Score=93.61 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=69.8
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
+++.+.+.... .++ +|||+|||+|.++..|+++|..|+|+|+|..|+..++..+.
T Consensus 35 i~~~Iv~~~~~----~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~-------------------- 89 (271)
T 3fut_A 35 HLRRIVEAARP----FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS-------------------- 89 (271)
T ss_dssp HHHHHHHHHCC----CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT--------------------
T ss_pred HHHHHHHhcCC----CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC--------------------
Confidence 55555555442 246 99999999999999999999999999999999998775210
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccccCC-CceeEEEecc--cccCcchHHHHHHH
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHP-NKWDCVATCF--FIDCANNIVSFIET 246 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~-~~fD~V~t~f--fidta~n~~~yl~~ 246 (298)
..++.++.||+.++..++ ..+|.|+++. .| +.+-+...++.
T Consensus 90 ----------------------~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~i-ss~il~~ll~~ 133 (271)
T 3fut_A 90 ----------------------GLPVRLVFQDALLYPWEEVPQGSLLVANLPYHI-ATPLVTRLLKT 133 (271)
T ss_dssp ----------------------TSSEEEEESCGGGSCGGGSCTTEEEEEEECSSC-CHHHHHHHHHH
T ss_pred ----------------------CCCEEEEECChhhCChhhccCccEEEecCcccc-cHHHHHHHhcC
Confidence 137889999998886543 3688888864 33 23334445544
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.83 E-value=3.1e-08 Score=94.26 Aligned_cols=113 Identities=11% Similarity=0.024 Sum_probs=82.3
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCC----------------------------------------
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY---------------------------------------- 142 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~---------------------------------------- 142 (298)
+...+...... .++..||||+||+|.++.+.|..+.
T Consensus 182 LAaall~l~~~----~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 257 (384)
T 3ldg_A 182 MAAAIILLSNW----FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL 257 (384)
T ss_dssp HHHHHHHHTTC----CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHhCC----CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc
Confidence 55555555442 2467899999999999999997653
Q ss_pred eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCC
Q psy3185 143 VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHP 222 (298)
Q Consensus 143 ~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~ 222 (298)
.|+|+|+|+.|+..|+.-+... .+ ...+.+..+|+.++.. +
T Consensus 258 ~v~GvDid~~al~~Ar~Na~~~------------------------------------gl--~~~I~~~~~D~~~l~~-~ 298 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNAREV------------------------------------GL--EDVVKLKQMRLQDFKT-N 298 (384)
T ss_dssp CEEEEESCHHHHHHHHHHHHHT------------------------------------TC--TTTEEEEECCGGGCCC-C
T ss_pred eEEEEECCHHHHHHHHHHHHHc------------------------------------CC--CCceEEEECChHHCCc-c
Confidence 3999999999999988732210 00 1358899999999864 4
Q ss_pred CceeEEEec--cc--ccCcchHHHHHHHHHHhccC--CeEEE
Q psy3185 223 NKWDCVATC--FF--IDCANNIVSFIETIFNILKP--GGIWI 258 (298)
Q Consensus 223 ~~fD~V~t~--ff--idta~n~~~yl~~I~~~Lkp--GG~~I 258 (298)
++||+|++. |- +....++....+.+.+.||+ ||...
T Consensus 299 ~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 299 KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEE
T ss_pred CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 589999997 54 33446677788888888886 66543
No 257
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.83 E-value=4e-08 Score=94.73 Aligned_cols=96 Identities=20% Similarity=0.192 Sum_probs=69.8
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..||+.+..|+|+|.|+.|+..|+..... +
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~----n------------------------------ 335 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEI----N------------------------------ 335 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----H------------------------------
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH----c------------------------------
Confidence 357999999999999999999999999999999999988763211 0
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In 259 (298)
. .++.+..+|+.++.. .+||+|++.---... ....++.+. .|+|||+++.
T Consensus 336 --g----l~v~~~~~d~~~~~~--~~fD~Vv~dPPr~g~--~~~~~~~l~-~l~p~givyv 385 (425)
T 2jjq_A 336 --N----VDAEFEVASDREVSV--KGFDTVIVDPPRAGL--HPRLVKRLN-REKPGVIVYV 385 (425)
T ss_dssp --T----CCEEEEECCTTTCCC--TTCSEEEECCCTTCS--CHHHHHHHH-HHCCSEEEEE
T ss_pred --C----CcEEEEECChHHcCc--cCCCEEEEcCCccch--HHHHHHHHH-hcCCCcEEEE
Confidence 0 126788899888753 289998874211111 123566665 4899998763
No 258
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.81 E-value=4e-08 Score=94.67 Aligned_cols=97 Identities=14% Similarity=0.073 Sum_probs=69.8
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+|||+|.++..||+.+..|+|+|.|+.|+..|+.-... +
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~----~------------------------------ 331 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARL----N------------------------------ 331 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHH----T------------------------------
T ss_pred CCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHH----c------------------------------
Confidence 357999999999999999999999999999999999998863211 0
Q ss_pred CCCCCCCCCeeEEeccccccc----cCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVY----VHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~----~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
.+ .++.+..+|+.+.. ..+++||+|++.-=-.. ..+.++.+.+ ++|++++.
T Consensus 332 --~~---~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g---~~~~~~~l~~-~~p~~ivy 386 (433)
T 1uwv_A 332 --GL---QNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAG---AAGVMQQIIK-LEPIRIVY 386 (433)
T ss_dssp --TC---CSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTC---CHHHHHHHHH-HCCSEEEE
T ss_pred --CC---CceEEEECCHHHHhhhhhhhcCCCCEEEECCCCcc---HHHHHHHHHh-cCCCeEEE
Confidence 01 26888999987742 23568999987321111 2245555554 78988764
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.78 E-value=2.3e-08 Score=90.06 Aligned_cols=53 Identities=15% Similarity=0.107 Sum_probs=44.1
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHH
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~ 159 (298)
+++.+.+.... .++.+|||+|||+|.++..|+++|..|+|+|+|+.|+..++.
T Consensus 17 i~~~iv~~~~~----~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~ 69 (255)
T 3tqs_A 17 VLQKIVSAIHP----QKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQK 69 (255)
T ss_dssp HHHHHHHHHCC----CTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHH
T ss_pred HHHHHHHhcCC----CCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHH
Confidence 45555555442 246799999999999999999999999999999999998876
No 260
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.75 E-value=9.2e-08 Score=90.72 Aligned_cols=88 Identities=19% Similarity=0.385 Sum_probs=61.8
Q ss_pred eEEeccccccccCCCceeEEEecccccCcc--------------------------------------hHHHHHHHHHHh
Q psy3185 209 SMAAGDFLQVYVHPNKWDCVATCFFIDCAN--------------------------------------NIVSFIETIFNI 250 (298)
Q Consensus 209 ~~~~gDf~~~~~~~~~fD~V~t~ffidta~--------------------------------------n~~~yl~~I~~~ 250 (298)
.-+.|.|-.-.+++++||+|+|++.||+.. |...+|+.+++.
T Consensus 135 ~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~e 214 (374)
T 3b5i_A 135 AGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAE 214 (374)
T ss_dssp EEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666655445789999999999988765 455579999999
Q ss_pred ccCCeEEEEe--c-----cc-------cc-c-----ccCC-------------CCCCccCCCHHHHHHHHH-hCCCEEEE
Q psy3185 251 LKPGGIWINL--G-----PL-------LY-H-----YSNM-------------LNEDSIEPSYEVVKQVIQ-GLGFVYEV 296 (298)
Q Consensus 251 LkpGG~~In~--g-----Pl-------~y-~-----~~~~-------------~~~~~~~ls~eEl~~~~~-~~GF~i~~ 296 (298)
|||||.++-. | |. .| . +.+. .+-|....|.+|++.+++ ..||+|.+
T Consensus 215 L~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~ 294 (374)
T 3b5i_A 215 VKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDK 294 (374)
T ss_dssp EEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEE
T ss_pred hCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEE
Confidence 9999999731 1 11 11 1 0000 123556689999999998 59999976
No 261
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.69 E-value=7.5e-08 Score=95.48 Aligned_cols=123 Identities=22% Similarity=0.183 Sum_probs=80.6
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc----C----------------CeEEEeeCCHHHHHHHHHHHh
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR----G----------------YVCQGNEFSLFMLFASNFILN 162 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~----G----------------~~v~g~D~S~~Ml~~a~~~l~ 162 (298)
|.+.+.+.+.+ .++.+|||||||+|.+...+++. + ..++|+|+++.|+..|+.-+-
T Consensus 157 iv~~mv~~l~p----~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 157 LIKTIIHLLKP----QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp HHHHHHHHHCC----CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc----CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 44554444432 34679999999999999888764 1 369999999999998875321
Q ss_pred hhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccc-cCCCceeEEEec--ccccC---
Q psy3185 163 KCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATC--FFIDC--- 236 (298)
Q Consensus 163 ~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~--ffidt--- 236 (298)
. |. +.. . + .....+..||+.... ...++||+|++. |....
T Consensus 233 l-------------~g------------------i~~-~-~-~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~ 278 (541)
T 2ar0_A 233 L-------------HD------------------IEG-N-L-DHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTN 278 (541)
T ss_dssp T-------------TT------------------CCC-B-G-GGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCC
T ss_pred H-------------hC------------------CCc-c-c-cccCCeEeCCCcccccccccCCeEEEECCCcccccchh
Confidence 0 00 000 0 0 013567888876643 235789999986 32221
Q ss_pred ---------cchHHHHHHHHHHhccCCeEEEEeccc
Q psy3185 237 ---------ANNIVSFIETIFNILKPGGIWINLGPL 263 (298)
Q Consensus 237 ---------a~n~~~yl~~I~~~LkpGG~~In~gPl 263 (298)
...-..++..+.+.|||||+++.+-|-
T Consensus 279 ~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 279 ITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp CCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred hHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 122347999999999999998766663
No 262
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.68 E-value=6e-08 Score=91.47 Aligned_cols=107 Identities=9% Similarity=0.028 Sum_probs=72.9
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
.+++.+.+.... .+.+|||+|||+|.++..+|+.+..|+|+|.|+.|+..++.-... +
T Consensus 201 ~l~~~~~~~~~~-----~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~----n------------- 258 (369)
T 3bt7_A 201 QMLEWALDVTKG-----SKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAA----N------------- 258 (369)
T ss_dssp HHHHHHHHHTTT-----CCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHH----T-------------
T ss_pred HHHHHHHHHhhc-----CCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHH----c-------------
Confidence 345555555442 246899999999999999999888999999999999988762211 0
Q ss_pred cccccccccccccCCCCCCCCCCCCCeeEEecccccccc--CC--------------CceeEEEecccccCcchHHHHHH
Q psy3185 182 NILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYV--HP--------------NKWDCVATCFFIDCANNIVSFIE 245 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~--~~--------------~~fD~V~t~ffidta~n~~~yl~ 245 (298)
.+ .++.+..||..++.. .. ++||+|+. |... ..+.+
T Consensus 259 -------------------g~---~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~----dPPr--~g~~~ 310 (369)
T 3bt7_A 259 -------------------HI---DNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFV----DPPR--SGLDS 310 (369)
T ss_dssp -------------------TC---CSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEE----CCCT--TCCCH
T ss_pred -------------------CC---CceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEE----CcCc--cccHH
Confidence 01 267788888766532 11 37999874 4321 12345
Q ss_pred HHHHhccCCeEEE
Q psy3185 246 TIFNILKPGGIWI 258 (298)
Q Consensus 246 ~I~~~LkpGG~~I 258 (298)
.+.+.|+|+|.++
T Consensus 311 ~~~~~l~~~g~iv 323 (369)
T 3bt7_A 311 ETEKMVQAYPRIL 323 (369)
T ss_dssp HHHHHHTTSSEEE
T ss_pred HHHHHHhCCCEEE
Confidence 5667778888776
No 263
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.66 E-value=6.7e-08 Score=91.78 Aligned_cols=111 Identities=11% Similarity=-0.030 Sum_probs=74.2
Q ss_pred CCeEEEecccCcHHHHHHHHc-C-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR-G-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~-G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
+.+|||+|||+|.++..+|++ | ..|+++|.|+.++..++.-+..... ....|+-
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~------------------------~~~~~~~ 103 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFD------------------------GELRESK 103 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCC------------------------SCCEECS
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcc------------------------ccccccc
Confidence 569999999999999999987 4 5799999999999988763221100 0000000
Q ss_pred CCCCCCCCCCeeEEeccccccccC-CCceeEEEecccccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVH-PNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~-~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
.......-.++.+..+|..++... .++||+|+. |.--....+++...++|||||+++
T Consensus 104 ~~~~~~gl~~i~v~~~Da~~~~~~~~~~fD~I~l----DP~~~~~~~l~~a~~~lk~gG~l~ 161 (378)
T 2dul_A 104 GRAILKGEKTIVINHDDANRLMAERHRYFHFIDL----DPFGSPMEFLDTALRSAKRRGILG 161 (378)
T ss_dssp SEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEE----CCSSCCHHHHHHHHHHEEEEEEEE
T ss_pred ccccccCCCceEEEcCcHHHHHHhccCCCCEEEe----CCCCCHHHHHHHHHHhcCCCCEEE
Confidence 000000002478899998776432 468999883 433334688999999999999775
No 264
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.63 E-value=9.7e-08 Score=96.09 Aligned_cols=115 Identities=20% Similarity=0.208 Sum_probs=79.4
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHH---HHHHHcC-C--eEEEeeCCHHHHHHHHHHHhhhhhcccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLA---FEIARRG-Y--VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWV 176 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla---~ela~~G-~--~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~ 176 (298)
|...|....+......+...|||+|||+|-|+ ...++++ - +|+|+|-|+ |...++.+.+.. .
T Consensus 341 I~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N----~------- 408 (637)
T 4gqb_A 341 IYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFE----E------- 408 (637)
T ss_dssp HHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHH----T-------
T ss_pred HHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhc----c-------
Confidence 55556555442222223457999999999994 4444443 2 589999997 666666654321 0
Q ss_pred ccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEec---ccccCcchHHHHHHHHHHhccC
Q psy3185 177 QQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATC---FFIDCANNIVSFIETIFNILKP 253 (298)
Q Consensus 177 ~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~---ffidta~n~~~yl~~I~~~Lkp 253 (298)
+ ...++++.||.+++.. +++.|+|||- +|++.- .+.+.+....|.|||
T Consensus 409 -------------------------~--~dkVtVI~gd~eev~L-PEKVDIIVSEwMG~fLl~E-~mlevL~Ardr~LKP 459 (637)
T 4gqb_A 409 -------------------------W--GSQVTVVSSDMREWVA-PEKADIIVSELLGSFADNE-LSPECLDGAQHFLKD 459 (637)
T ss_dssp -------------------------T--GGGEEEEESCTTTCCC-SSCEEEEECCCCBTTBGGG-CHHHHHHHHGGGEEE
T ss_pred -------------------------C--CCeEEEEeCcceeccC-CcccCEEEEEcCccccccc-CCHHHHHHHHHhcCC
Confidence 1 1478899999999853 5899999984 456543 466889999999999
Q ss_pred CeEEE
Q psy3185 254 GGIWI 258 (298)
Q Consensus 254 GG~~I 258 (298)
||+.|
T Consensus 460 gGimi 464 (637)
T 4gqb_A 460 DGVSI 464 (637)
T ss_dssp EEEEE
T ss_pred CcEEc
Confidence 99987
No 265
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.56 E-value=6e-08 Score=87.40 Aligned_cols=41 Identities=22% Similarity=0.167 Sum_probs=36.6
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCH-------HHHHHHHH
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSL-------FMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~-------~Ml~~a~~ 159 (298)
++.+|||+|||+|+++..+|+.|..|+|+|.|+ .|+..++.
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~ 130 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALL 130 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHh
Confidence 357999999999999999999999999999999 77776654
No 266
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.55 E-value=1.3e-07 Score=84.67 Aligned_cols=53 Identities=13% Similarity=0.095 Sum_probs=44.1
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcC-CeEEEeeCCHHHHHHHHH
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRG-YVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G-~~v~g~D~S~~Ml~~a~~ 159 (298)
+++.+.+..+. .++.+|||+|||+|.++..|+++| .+|+|+|+|..|+..++.
T Consensus 19 i~~~iv~~~~~----~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~ 72 (249)
T 3ftd_A 19 VLKKIAEELNI----EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKS 72 (249)
T ss_dssp HHHHHHHHTTC----CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTT
T ss_pred HHHHHHHhcCC----CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHh
Confidence 66666666653 246799999999999999999996 789999999999987653
No 267
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.54 E-value=2.1e-07 Score=84.89 Aligned_cols=53 Identities=21% Similarity=0.247 Sum_probs=43.4
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCe----EEEeeCCHHHHHHHHH
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYV----CQGNEFSLFMLFASNF 159 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~----v~g~D~S~~Ml~~a~~ 159 (298)
+++.+.+.... .++.+|||+|||+|.++..|++++.. |+|+|+|+.|+..++.
T Consensus 30 i~~~iv~~~~~----~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~ 86 (279)
T 3uzu_A 30 VIDAIVAAIRP----ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQ 86 (279)
T ss_dssp HHHHHHHHHCC----CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHH
T ss_pred HHHHHHHhcCC----CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHH
Confidence 44555554432 24679999999999999999999887 9999999999998876
No 268
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.53 E-value=5.8e-07 Score=89.16 Aligned_cols=108 Identities=16% Similarity=0.162 Sum_probs=75.5
Q ss_pred CCCeEEEecccCcHHHHHHHHc-----CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-----GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVT 193 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-----G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ 193 (298)
.+.+||||+||+|.+...+++. ...++|+|+++.|+..|+.-+-- |
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l-------------~---------------- 271 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMIL-------------H---------------- 271 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHH-------------T----------------
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHH-------------c----------------
Confidence 5679999999999999998876 46799999999999888652110 0
Q ss_pred cCCCCCCCCCCCCCeeEEecccccc--c-cCCCceeEEEec--ccccCc--------------------ch-HHHHHHHH
Q psy3185 194 FPDINTSDYNDDCDFSMAAGDFLQV--Y-VHPNKWDCVATC--FFIDCA--------------------NN-IVSFIETI 247 (298)
Q Consensus 194 ipd~~~~~~~~~~~~~~~~gDf~~~--~-~~~~~fD~V~t~--ffidta--------------------~n-~~~yl~~I 247 (298)
.+. ..++.+..||+... + ....+||+|+++ |..... .+ -..++..+
T Consensus 272 --gi~------~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~ 343 (542)
T 3lkd_A 272 --GVP------IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHG 343 (542)
T ss_dssp --TCC------GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHH
T ss_pred --CCC------cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHH
Confidence 000 02566788887765 2 245789999876 322110 00 13589999
Q ss_pred HHhcc-CCeEEEEeccc
Q psy3185 248 FNILK-PGGIWINLGPL 263 (298)
Q Consensus 248 ~~~Lk-pGG~~In~gPl 263 (298)
.+.|| |||+...+-|-
T Consensus 344 l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 344 YYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp HHTBCTTTCEEEEEEET
T ss_pred HHHhCCCceeEEEEecc
Confidence 99999 99998766664
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.52 E-value=6.9e-07 Score=91.22 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=78.0
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcC-----------------------------------------
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRG----------------------------------------- 141 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G----------------------------------------- 141 (298)
+...+...... .++..||||+||+|.++.+.|..+
T Consensus 178 LAa~ll~~~~~----~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~ 253 (703)
T 3v97_A 178 LAAAIVMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 253 (703)
T ss_dssp HHHHHHHHTTC----CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCC----CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccc
Confidence 55555555442 246789999999999999998753
Q ss_pred ---CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEecccccc
Q psy3185 142 ---YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQV 218 (298)
Q Consensus 142 ---~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~ 218 (298)
..++|+|+++.|+..|+.-+... .+ ...+.+..+|+.++
T Consensus 254 ~~~~~i~G~Did~~av~~A~~N~~~a------------------------------------gv--~~~i~~~~~D~~~~ 295 (703)
T 3v97_A 254 EYSSHFYGSDSDARVIQRARTNARLA------------------------------------GI--GELITFEVKDVAQL 295 (703)
T ss_dssp HCCCCEEEEESCHHHHHHHHHHHHHT------------------------------------TC--GGGEEEEECCGGGC
T ss_pred cCCccEEEEECCHHHHHHHHHHHHHc------------------------------------CC--CCceEEEECChhhC
Confidence 46999999999999988632210 00 12478999999887
Q ss_pred ccC--CCceeEEEec--cc--ccCcchHHHHHHHHHHh---ccCCeEEEE
Q psy3185 219 YVH--PNKWDCVATC--FF--IDCANNIVSFIETIFNI---LKPGGIWIN 259 (298)
Q Consensus 219 ~~~--~~~fD~V~t~--ff--idta~n~~~yl~~I~~~---LkpGG~~In 259 (298)
..+ .++||+|+|. |- +....++....+.+.+. ++|||....
T Consensus 296 ~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 296 TNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp CCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 433 3489999998 54 33444555555555544 458987653
No 270
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.52 E-value=3.3e-07 Score=87.12 Aligned_cols=87 Identities=17% Similarity=0.245 Sum_probs=57.6
Q ss_pred EeccccccccCCCceeEEEecccccCcchHH----------------------------H-----------HHHHHHHhc
Q psy3185 211 AAGDFLQVYVHPNKWDCVATCFFIDCANNIV----------------------------S-----------FIETIFNIL 251 (298)
Q Consensus 211 ~~gDf~~~~~~~~~fD~V~t~ffidta~n~~----------------------------~-----------yl~~I~~~L 251 (298)
+.|.|-.-.++++++|+|+|++.+|+..++. . +|+..++.|
T Consensus 136 vpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL 215 (384)
T 2efj_A 136 MPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEEL 215 (384)
T ss_dssp CCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred cchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445544445789999999999888754321 2 388889999
Q ss_pred cCCeEEEEe--c-------cc---c----cc------c-----cCCCCCCccCCCHHHHHHHHHhC-CCEEEEe
Q psy3185 252 KPGGIWINL--G-------PL---L----YH------Y-----SNMLNEDSIEPSYEVVKQVIQGL-GFVYEVE 297 (298)
Q Consensus 252 kpGG~~In~--g-------Pl---~----y~------~-----~~~~~~~~~~ls~eEl~~~~~~~-GF~i~~~ 297 (298)
||||.++-. | |. + |. . -+..+-|...+|.+|++.++++. ||+|.+.
T Consensus 216 ~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 216 ISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp EEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred ccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 999999732 1 10 0 00 0 00012356678999999999987 5898763
No 271
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.52 E-value=2e-07 Score=85.94 Aligned_cols=73 Identities=16% Similarity=0.089 Sum_probs=57.4
Q ss_pred CCCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+|||+|..+..++++ +..|+|+|.|+.|+..++..+..
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~--------------------------------- 72 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKE--------------------------------- 72 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGG---------------------------------
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh---------------------------------
Confidence 4679999999999999999988 47899999999999998863211
Q ss_pred CCCCCCCCCCCeeEEecccccccc--C---CCceeEEEec
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYV--H---PNKWDCVATC 231 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~--~---~~~fD~V~t~ 231 (298)
.. .++.++.+||.++.. . .++||+|+..
T Consensus 73 -----~g--~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 73 -----FS--DRVSLFKVSYREADFLLKTLGIEKVDGILMD 105 (301)
T ss_dssp -----GT--TTEEEEECCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred -----cC--CcEEEEECCHHHHHHHHHhcCCCCCCEEEEc
Confidence 01 378899999988742 1 1589988753
No 272
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.50 E-value=4.4e-07 Score=81.75 Aligned_cols=146 Identities=15% Similarity=0.167 Sum_probs=83.7
Q ss_pred CCCeEEEecccCcHHHHHHHHc-------C-------CeEEEeeCCH---HHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-------G-------YVCQGNEFSL---FMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-------G-------~~v~g~D~S~---~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
+..+||++|+|+|..+..+++. + -.++++|..+ .|+..+..... .+.+++.....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p--------~l~~~a~~l~~ 131 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWP--------ELAPWAEQLQA 131 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCG--------GGHHHHHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcCh--------hHHHHHHHHHH
Confidence 4579999999999988776542 2 3689999655 77765431000 00000000000
Q ss_pred cccccccccccccCCCCCCCC-CCCCCeeEEeccccccccC-CC----ceeEEEe-cccccCcch--HHHHHHHHHHhcc
Q psy3185 182 NILTHHQTMAVTFPDINTSDY-NDDCDFSMAAGDFLQVYVH-PN----KWDCVAT-CFFIDCANN--IVSFIETIFNILK 252 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~-~~~~~~~~~~gDf~~~~~~-~~----~fD~V~t-~ffidta~n--~~~yl~~I~~~Lk 252 (298)
+. +..+|.+.-..+ ....++.+..||+.+.... ++ .||+|+- .|.-...+. -.++++.++++||
T Consensus 132 ------~w-~~~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~ 204 (257)
T 2qy6_A 132 ------QW-PMPLPGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLAR 204 (257)
T ss_dssp ------TC-CCSCSEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEE
T ss_pred ------hc-cccccchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcC
Confidence 00 000000000000 0124788999999885432 22 7998864 332222223 2579999999999
Q ss_pred CCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 253 PGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 253 pGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
|||+++.+.. ...+++.+..+||++.+
T Consensus 205 pGG~l~tysa-----------------a~~vrr~L~~aGF~v~~ 231 (257)
T 2qy6_A 205 PGGTLATFTS-----------------AGFVRRGLQEAGFTMQK 231 (257)
T ss_dssp EEEEEEESCC-----------------BHHHHHHHHHHTEEEEE
T ss_pred CCcEEEEEeC-----------------CHHHHHHHHHCCCEEEe
Confidence 9999985321 23678888899999875
No 273
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.49 E-value=6.7e-07 Score=88.75 Aligned_cols=128 Identities=15% Similarity=0.093 Sum_probs=80.6
Q ss_pred CCeEEEecccCcHHHHHHHHc-----------------CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccc
Q psy3185 120 DVNILVPGAGLGRLAFEIARR-----------------GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~-----------------G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~ 182 (298)
..+||||+||+|.+...+++. ...++|+|+++.|+..|+.-+-- |
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l-------------~----- 306 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI-------------R----- 306 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH-------------T-----
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH-------------h-----
Confidence 349999999999998887542 35799999999999888752210 0
Q ss_pred ccccccccccccCCCCCCCCCCCCCeeEEeccccccc-cCCCceeEEEec--cccc-C----------------------
Q psy3185 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATC--FFID-C---------------------- 236 (298)
Q Consensus 183 ~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~--ffid-t---------------------- 236 (298)
.+ . .++.+..||+.... ....+||+|++. |... +
T Consensus 307 -------------gi-----~--~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~ 366 (544)
T 3khk_A 307 -------------GI-----D--FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRIL 366 (544)
T ss_dssp -------------TC-----C--CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEEC
T ss_pred -------------CC-----C--cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccc
Confidence 00 0 12233556654432 234688888875 4321 0
Q ss_pred ----cchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCC
Q psy3185 237 ----ANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGF 292 (298)
Q Consensus 237 ----a~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF 292 (298)
...-..+++.+.+.|||||....+-|--+-+.. .-....+++.+.+.+.
T Consensus 367 ~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~-------~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 367 TPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSN-------TNNEGEIRKTLVEQDL 419 (544)
T ss_dssp CCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCC-------GGGHHHHHHHHHHTTC
T ss_pred cCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcC-------cchHHHHHHHHHhCCc
Confidence 011236899999999999998777663322221 0125678887776554
No 274
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.47 E-value=3.9e-07 Score=83.63 Aligned_cols=107 Identities=19% Similarity=0.249 Sum_probs=77.9
Q ss_pred CCCeEEEecccCcHHHHHHHHc-C-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-G-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+||++|-|.|..+.++.+. + -.|+.+|+.+.++..++.-+.....
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~------------------------------ 132 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA------------------------------ 132 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHT------------------------------
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccc------------------------------
Confidence 3679999999999999999987 3 4799999999999998763321000
Q ss_pred CCCCCCCCCCCeeEEecccccccc-CCCceeEEEecccc--cCcchH--HHHHHHHHHhccCCeEEEE
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYV-HPNKWDCVATCFFI--DCANNI--VSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~-~~~~fD~V~t~ffi--dta~n~--~~yl~~I~~~LkpGG~~In 259 (298)
. . ....++.++.+|...+.. ..++||+|+.-.+= ..+..+ .++++.++++|+|||+++.
T Consensus 133 -~--~-~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 133 -G--S-YDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp -T--G-GGCTTEEEEESCTTTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEE
T ss_pred -c--c-cCCCcEEEEechHHHHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEE
Confidence 0 0 012478999999887754 35899998764321 112222 3799999999999999984
No 275
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.42 E-value=3.7e-07 Score=81.91 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=39.5
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCe--EEEeeCCHHHHHHHHH
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYV--CQGNEFSLFMLFASNF 159 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~--v~g~D~S~~Ml~~a~~ 159 (298)
+++.+.+.... .++.+|||+|||+|.++. +++ +.. |+|+|+|+.|+..++.
T Consensus 9 i~~~iv~~~~~----~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~ 61 (252)
T 1qyr_A 9 VIDSIVSAINP----QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQT 61 (252)
T ss_dssp HHHHHHHHHCC----CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHT
T ss_pred HHHHHHHhcCC----CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHH
Confidence 45555554432 246799999999999999 764 677 9999999999988764
No 276
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.41 E-value=3.3e-07 Score=87.90 Aligned_cols=74 Identities=14% Similarity=0.033 Sum_probs=57.5
Q ss_pred CCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
+.+|||+|||+|..+..+|+.|..|+|+|.|+.|+..++.-+....
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~---------------------------------- 139 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLL---------------------------------- 139 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHS----------------------------------
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhc----------------------------------
Confidence 6799999999999999999999999999999999999887322100
Q ss_pred CCCCCCCCeeEEecccccccc--CCCceeEEEe
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYV--HPNKWDCVAT 230 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~--~~~~fD~V~t 230 (298)
..+ .++.++.+|+.++.. ..++||+|+.
T Consensus 140 ~gl---~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 140 NEG---KDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp CTT---CEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred cCC---CcEEEEECcHHHhhhhccCCCceEEEE
Confidence 000 368899999887532 2368999876
No 277
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.40 E-value=3.3e-07 Score=86.41 Aligned_cols=143 Identities=19% Similarity=0.188 Sum_probs=90.3
Q ss_pred CCCeEEEecccCcHHHHHHHHc------------------CCeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR------------------GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTD 180 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~------------------G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s 180 (298)
+..+|+|+||++|..+..+... .++|..+|+...+....-..|
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L------------------- 111 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSL------------------- 111 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTT-------------------
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhc-------------------
Confidence 4678999999999988765543 256778888777665432211
Q ss_pred ccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcch---------------------
Q psy3185 181 NNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANN--------------------- 239 (298)
Q Consensus 181 ~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n--------------------- 239 (298)
|...... ...=+.-+.|.|-.-.++++++|+|+|++.||+...
T Consensus 112 --------------~~~~~~~--~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~ 175 (359)
T 1m6e_X 112 --------------PIENDVD--GVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQS 175 (359)
T ss_dssp --------------TTSCSCT--TCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCT
T ss_pred --------------chhcccC--CCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHH
Confidence 1000000 001123355666554457899999999998887543
Q ss_pred ------------HHHHHHHHHHhccCCeEEEEe-------cc------cccc-----c-----cCC--------CCCCcc
Q psy3185 240 ------------IVSFIETIFNILKPGGIWINL-------GP------LLYH-----Y-----SNM--------LNEDSI 276 (298)
Q Consensus 240 ------------~~~yl~~I~~~LkpGG~~In~-------gP------l~y~-----~-----~~~--------~~~~~~ 276 (298)
...+|+..++.|||||.++-. +| .+|. + ++. .+-|..
T Consensus 176 v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y 255 (359)
T 1m6e_X 176 VLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQY 255 (359)
T ss_dssp TSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCcc
Confidence 334699999999999999731 22 1121 0 000 123556
Q ss_pred CCCHHHHHHHHHhCC-CEEEE
Q psy3185 277 EPSYEVVKQVIQGLG-FVYEV 296 (298)
Q Consensus 277 ~ls~eEl~~~~~~~G-F~i~~ 296 (298)
.+|.+|++.++++.| |+|.+
T Consensus 256 ~ps~~E~~~~ie~~G~F~i~~ 276 (359)
T 1m6e_X 256 TPSPTEVEAEILKEGSFLIDH 276 (359)
T ss_dssp CCCSHHHHHHHHHTTTBCCEE
T ss_pred CCCHHHHHHHHHHcCCceEEE
Confidence 789999999999885 57764
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.40 E-value=7.7e-07 Score=90.02 Aligned_cols=113 Identities=16% Similarity=0.127 Sum_probs=76.2
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHH---HH-cC-----------CeEEEeeCCHHHHHHHHHHHhhhhhc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEI---AR-RG-----------YVCQGNEFSLFMLFASNFILNKCREK 167 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~el---a~-~G-----------~~v~g~D~S~~Ml~~a~~~l~~~~~~ 167 (298)
|...+...++. ...+..|||+|||+|-|+... ++ .| ..|+|+|.|+......+.+..
T Consensus 396 I~~al~d~~~~---~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~----- 467 (745)
T 3ua3_A 396 VVGALKDLGAD---GRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV----- 467 (745)
T ss_dssp HHHHHHHHHTT---CCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-----
T ss_pred HHHHHHHhhcc---cCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-----
Confidence 44445544431 123467999999999996432 22 23 379999999966554443211
Q ss_pred cccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccccC-----CCceeEEEec---ccccCcch
Q psy3185 168 NVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVH-----PNKWDCVATC---FFIDCANN 239 (298)
Q Consensus 168 ~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~-----~~~fD~V~t~---ffidta~n 239 (298)
+. + ...+.++.||.+++..+ .++.|+|||- +|++.. -
T Consensus 468 Ng--------------------------------~--~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nE-L 512 (745)
T 3ua3_A 468 RT--------------------------------W--KRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNE-L 512 (745)
T ss_dssp HT--------------------------------T--TTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGG-S
T ss_pred cC--------------------------------C--CCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchh-c
Confidence 00 1 13688999999998653 6899999985 456543 3
Q ss_pred HHHHHHHHHHhccCCeEEE
Q psy3185 240 IVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 240 ~~~yl~~I~~~LkpGG~~I 258 (298)
..+.|..+.+.|||||+.|
T Consensus 513 ~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 513 SPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHHTTGGGSCTTCEEE
T ss_pred cHHHHHHHHHhCCCCcEEE
Confidence 5678888899999999987
No 279
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.39 E-value=6.7e-07 Score=85.30 Aligned_cols=97 Identities=20% Similarity=0.132 Sum_probs=71.8
Q ss_pred CCeEEEecccCcHHHHHHHHc--C-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR--G-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~--G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
+.+|||++||+|.++.++|++ | -.|++||.|+.++..++.-+.. +
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~----N---------------------------- 100 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKL----N---------------------------- 100 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHH----T----------------------------
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH----h----------------------------
Confidence 579999999999999999985 5 4699999999999888762221 0
Q ss_pred CCCCCCCCCCC-eeEEecccccccc-C-CCceeEEEecccccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 197 INTSDYNDDCD-FSMAAGDFLQVYV-H-PNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 197 ~~~~~~~~~~~-~~~~~gDf~~~~~-~-~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
.+ ..+ +.+..+|..++.. . .++||+|+. |.......+++.+.++|||||+++
T Consensus 101 ----gl--~~~~v~v~~~Da~~~l~~~~~~~fD~V~l----DP~g~~~~~l~~a~~~Lk~gGll~ 155 (392)
T 3axs_A 101 ----NI--PEDRYEIHGMEANFFLRKEWGFGFDYVDL----DPFGTPVPFIESVALSMKRGGILS 155 (392)
T ss_dssp ----TC--CGGGEEEECSCHHHHHHSCCSSCEEEEEE----CCSSCCHHHHHHHHHHEEEEEEEE
T ss_pred ----CC--CCceEEEEeCCHHHHHHHhhCCCCcEEEE----CCCcCHHHHHHHHHHHhCCCCEEE
Confidence 00 023 7888999876643 2 468999864 432223568999999999999775
No 280
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.34 E-value=3.7e-06 Score=77.60 Aligned_cols=73 Identities=14% Similarity=0.075 Sum_probs=56.3
Q ss_pred CCCeEEEecccCcHHHHHHHHc---CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR---GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~---G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
++.+|||+|||+|..+..||.. ...|+|+|.|+.|+..++..+.+.
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~------------------------------- 150 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARA------------------------------- 150 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc-------------------------------
Confidence 4679999999999999999985 268999999999999887744321
Q ss_pred CCCCCCCCCCCCeeEEeccccccccCC---CceeEEEe
Q psy3185 196 DINTSDYNDDCDFSMAAGDFLQVYVHP---NKWDCVAT 230 (298)
Q Consensus 196 d~~~~~~~~~~~~~~~~gDf~~~~~~~---~~fD~V~t 230 (298)
.+ .++.++.+|+.++.... ++||+|+.
T Consensus 151 -----g~---~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 151 -----GV---SCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp -----TC---CSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred -----CC---CeEEEEeCChHhcCccccccCCCCEEEE
Confidence 00 26788899988875322 57998874
No 281
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.33 E-value=8.1e-07 Score=80.11 Aligned_cols=81 Identities=19% Similarity=0.121 Sum_probs=57.7
Q ss_pred CeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCC
Q psy3185 121 VNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTS 200 (298)
Q Consensus 121 ~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~ 200 (298)
.+|||+|||+|+.+.++|.+|..|+++|.|+.|...++..+.++... ..+-.|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~--~~~~~~------------------------- 142 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYAD--AEIGGW------------------------- 142 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHC--TTTHHH-------------------------
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhh--Hhhhhh-------------------------
Confidence 79999999999999999999999999999999988777655443210 000000
Q ss_pred CCCCCCCeeEEecccccccc-CCCceeEEEec
Q psy3185 201 DYNDDCDFSMAAGDFLQVYV-HPNKWDCVATC 231 (298)
Q Consensus 201 ~~~~~~~~~~~~gDf~~~~~-~~~~fD~V~t~ 231 (298)
+ ..++.++.+|..++.. ..++||+|+.-
T Consensus 143 -l--~~~i~~~~~D~~~~L~~~~~~fDvV~lD 171 (258)
T 2oyr_A 143 -L--QERLQLIHASSLTALTDITPRPQVVYLD 171 (258)
T ss_dssp -H--HHHEEEEESCHHHHSTTCSSCCSEEEEC
T ss_pred -h--hcCEEEEECCHHHHHHhCcccCCEEEEc
Confidence 0 0257889999877532 23479998763
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.32 E-value=2.7e-06 Score=87.35 Aligned_cols=114 Identities=15% Similarity=0.150 Sum_probs=73.8
Q ss_pred CCCeEEEecccCcHHHHHHHHcC-----CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG-----YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVT 193 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G-----~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ 193 (298)
++.+|||||||+|.++..+++.. ..++|+|+++.++..|+..+|.... . .. |
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN--~-Ll----h---------------- 377 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP--Q-LV----S---------------- 377 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST--T-TC----B----------------
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh--h-hh----c----------------
Confidence 46799999999999999999863 3699999999999988443332100 0 00 0
Q ss_pred cCCCCCCCCCCCCCeeEEeccccccc-cCCCceeEEEec--ccccCc--c------------------------h-HHHH
Q psy3185 194 FPDINTSDYNDDCDFSMAAGDFLQVY-VHPNKWDCVATC--FFIDCA--N------------------------N-IVSF 243 (298)
Q Consensus 194 ipd~~~~~~~~~~~~~~~~gDf~~~~-~~~~~fD~V~t~--ffidta--~------------------------n-~~~y 243 (298)
. .....+..+|+.... ...++||+|++. |..... . + ...+
T Consensus 378 -------G---i~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aF 447 (878)
T 3s1s_A 378 -------S---NNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALF 447 (878)
T ss_dssp -------T---TBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHH
T ss_pred -------C---CCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHH
Confidence 0 012234556666532 234789999986 432110 0 1 2347
Q ss_pred HHHHHHhccCCeEEEEeccccc
Q psy3185 244 IETIFNILKPGGIWINLGPLLY 265 (298)
Q Consensus 244 l~~I~~~LkpGG~~In~gPl~y 265 (298)
++.+.++|||||.+..+-|--|
T Consensus 448 Ie~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 448 LELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp HHHHHHHSCTTCEEEEEEETHH
T ss_pred HHHHHHhcCCCcEEEEEEChHH
Confidence 8889999999999987666433
No 283
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.17 E-value=6.4e-06 Score=77.96 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=76.2
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
++.+||++|-|.|..+.++.+... .|+.+|+.+.++..++.-+. .... .
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp------------~~~~-----------------~- 254 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMR------------KTCG-----------------D- 254 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCC------------C----------------------
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhch------------hhhh-----------------h-
Confidence 457999999999999999998754 59999999999999876221 1000 0
Q ss_pred CCCCCCCCCCeeEEecccccccc----CCCceeEEEecccc---cC-----cchH--HHHHHHHHHhccCCeEEEE
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV----HPNKWDCVATCFFI---DC-----ANNI--VSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~----~~~~fD~V~t~ffi---dt-----a~n~--~~yl~~I~~~LkpGG~~In 259 (298)
....+...++.++.+|...+.. ..++||+|+.-.+= .+ +..+ .++++.++++|+|||+++.
T Consensus 255 -~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 255 -VLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp -CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred -hhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 0000122468899999877642 34689998764321 11 1122 3688999999999999985
No 284
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.11 E-value=3.4e-05 Score=66.98 Aligned_cols=96 Identities=15% Similarity=-0.018 Sum_probs=67.0
Q ss_pred CCeEEEecccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR-GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
..+||++|| |.-+..+|+. +..|+.+|.++.+...++..+.+..
T Consensus 31 a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g--------------------------------- 75 (202)
T 3cvo_A 31 AEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANP--------------------------------- 75 (202)
T ss_dssp CSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSC---------------------------------
T ss_pred CCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcC---------------------------------
Confidence 469999998 4788888887 7899999999999998887554311
Q ss_pred CCCCCCCCCeeEEecccccc-----------------c-------cCCCceeEEEecccccCcchHHHHHHHHHHhccCC
Q psy3185 199 TSDYNDDCDFSMAAGDFLQV-----------------Y-------VHPNKWDCVATCFFIDCANNIVSFIETIFNILKPG 254 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~-----------------~-------~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpG 254 (298)
+....++.+..||..+. | ...++||+|+ ||-... ..|+..+.++|+||
T Consensus 76 ---~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIf----IDg~k~-~~~~~~~l~~l~~G 147 (202)
T 3cvo_A 76 ---PAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVL----VDGRFR-VGCALATAFSITRP 147 (202)
T ss_dssp ---CCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEE----ECSSSH-HHHHHHHHHHCSSC
T ss_pred ---CCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEE----EeCCCc-hhHHHHHHHhcCCC
Confidence 00013566666664332 1 1237899875 564432 47788888999999
Q ss_pred eEEE
Q psy3185 255 GIWI 258 (298)
Q Consensus 255 G~~I 258 (298)
|++|
T Consensus 148 G~Iv 151 (202)
T 3cvo_A 148 VTLL 151 (202)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9997
No 285
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.94 E-value=2.2e-05 Score=71.50 Aligned_cols=77 Identities=16% Similarity=0.093 Sum_probs=60.0
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++..+||.+||.|..+..|++++..|+|+|.++.|+..++. +.
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~------------------------------------ 64 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LH------------------------------------ 64 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TC------------------------------------
T ss_pred CCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hc------------------------------------
Confidence 46799999999999999999998899999999999998875 32
Q ss_pred CCCCCCCCCeeEEecccccccc-----CCCceeEEE-----ecccccCcc
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYV-----HPNKWDCVA-----TCFFIDCAN 238 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~-----~~~~fD~V~-----t~ffidta~ 238 (298)
. .++.++.++|.++.. ..+++|+|+ |++-+|+++
T Consensus 65 ----~--~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~DLGvSS~Qld~~~ 108 (285)
T 1wg8_A 65 ----L--PGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSSFHLDDPS 108 (285)
T ss_dssp ----C--TTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSCCHHHHHCGG
T ss_pred ----c--CCEEEEECCcchHHHHHHHcCCCCcCEEEeCCccccccccccc
Confidence 0 268899999988742 125788876 445555543
No 286
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.92 E-value=3.2e-05 Score=70.06 Aligned_cols=111 Identities=13% Similarity=0.019 Sum_probs=66.7
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CC-eEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccc
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTD 180 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s 180 (298)
+++..++.+- .++.+|||+|||.|..+...+.+ |. .|+|+|++..|.. . |
T Consensus 63 L~ei~ek~~l-----~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~-------~----------p------ 114 (277)
T 3evf_A 63 LRWFHERGYV-----KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHE-------K----------P------ 114 (277)
T ss_dssp HHHHHHTTSS-----CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCC-------C----------C------
T ss_pred HHHHHHhCCC-----CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcc-------c----------c------
Confidence 5555555322 24568999999999999988876 54 5889998854310 0 0
Q ss_pred ccccccccccccccCCCCCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcc------hHHHHHHHHHHhccCC
Q psy3185 181 NNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCAN------NIVSFIETIFNILKPG 254 (298)
Q Consensus 181 ~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~------n~~~yl~~I~~~LkpG 254 (298)
+|.. +...++....+++.......++||+|++-...++.. .....++.+.++||||
T Consensus 115 -------------i~~~-----~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG 176 (277)
T 3evf_A 115 -------------MNVQ-----SLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACG 176 (277)
T ss_dssp -------------CCCC-----BTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred -------------cccC-----cCCCCeEEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCC
Confidence 0000 001133334444433333567899999876444211 1123467888999999
Q ss_pred -eEEEE
Q psy3185 255 -GIWIN 259 (298)
Q Consensus 255 -G~~In 259 (298)
|.||.
T Consensus 177 ~G~FV~ 182 (277)
T 3evf_A 177 VDNFCV 182 (277)
T ss_dssp CSEEEE
T ss_pred CCeEEE
Confidence 99984
No 287
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.90 E-value=2.2e-05 Score=71.60 Aligned_cols=55 Identities=20% Similarity=0.141 Sum_probs=45.4
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHh
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILN 162 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~ 162 (298)
+++.+.+.+. .++..||||+||+|.++.++++.|..++|+|+++.|+..++..+.
T Consensus 224 l~~~~i~~~~-----~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 224 LAERLVRMFS-----FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp HHHHHHHHHC-----CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-----CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence 4555554443 246799999999999999999999999999999999999887554
No 288
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.87 E-value=2e-05 Score=64.98 Aligned_cols=46 Identities=11% Similarity=-0.058 Sum_probs=39.3
Q ss_pred HHHHHHHhhCCCCCCCCCCCeEEEecccCc-HHHHHHHH-cCCeEEEeeCCHHH
Q psy3185 102 PIISEILARFPPETINPKDVNILVPGAGLG-RLAFEIAR-RGYVCQGNEFSLFM 153 (298)
Q Consensus 102 ~i~~~l~~~~p~~~~~~~~~~VLdpGcG~G-rla~ela~-~G~~v~g~D~S~~M 153 (298)
.|.++|.+.+. .+.+||++|||.| +.|..||+ .|++|+++|+|+..
T Consensus 24 ~LaeYI~~~~~------~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~A 71 (153)
T 2k4m_A 24 DLAVYIIRCSG------PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSH 71 (153)
T ss_dssp HHHHHHHHHSC------SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSS
T ss_pred HHHHHHHhcCC------CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccc
Confidence 47777777664 2579999999999 89999997 89999999999863
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.84 E-value=7.4e-05 Score=70.51 Aligned_cols=119 Identities=13% Similarity=0.144 Sum_probs=79.6
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
++.+|||+||+.|.-++.++++|..|+|||..+ |-....
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~~~l~---------------------------------------- 249 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MAQSLM---------------------------------------- 249 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CCHHHH----------------------------------------
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cChhhc----------------------------------------
Confidence 478999999999999999999999999999864 211100
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCC---eEEEEec-cccccccCCCCCC
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPG---GIWINLG-PLLYHYSNMLNED 274 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpG---G~~In~g-Pl~y~~~~~~~~~ 274 (298)
...++.+..+|+..+.+..+.+|+|+| |-+.++....+.+.+.|..| +..+|+- |+.-.+.
T Consensus 250 -----~~~~V~~~~~d~~~~~~~~~~~D~vvs----Dm~~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~------ 314 (375)
T 4auk_A 250 -----DTGQVTWLREDGFKFRPTRSNISWMVC----DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYE------ 314 (375)
T ss_dssp -----TTTCEEEECSCTTTCCCCSSCEEEEEE----CCSSCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHH------
T ss_pred -----cCCCeEEEeCccccccCCCCCcCEEEE----cCCCChHHhHHHHHHHHhccccceEEEEEEecccchHH------
Confidence 013788899998887766688999988 55666666666676666654 5555542 2211110
Q ss_pred ccCCCHHHHHHHHHhCCCE
Q psy3185 275 SIEPSYEVVKQVIQGLGFV 293 (298)
Q Consensus 275 ~~~ls~eEl~~~~~~~GF~ 293 (298)
.+.-..+.+...+...||.
T Consensus 315 ~l~~~~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 315 EVSHNLAYIQAQLDEHGIN 333 (375)
T ss_dssp HHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhcCcc
Confidence 1111245566666777764
No 290
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.80 E-value=0.00021 Score=70.61 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=33.1
Q ss_pred CCCCeEEEecccCcHHHHHHHHc---------------CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGLGRLAFEIARR---------------GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~Grla~ela~~---------------G~~v~g~D~S~~Ml~~a~~ 159 (298)
..+.+|+||.||+|.+....++. -..+.|+|+.+.|...|+.
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~m 272 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQM 272 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHH
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHH
Confidence 34569999999999998776542 2458999999999887753
No 291
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.72 E-value=0.00042 Score=63.05 Aligned_cols=133 Identities=11% Similarity=0.092 Sum_probs=86.7
Q ss_pred HHHHHHHhhhccCC----hHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-------CCeEEEe
Q psy3185 79 TTLKQFVRDWSEEG----SEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-------GYVCQGN 147 (298)
Q Consensus 79 ~~l~~~~RdWs~~g----~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-------G~~v~g~ 147 (298)
+.++.+-+||-... ..+|-.....+++.+...- .+.+||++|+..|.-+..+|.. +-.|+++
T Consensus 69 ~~~r~~g~~~~~~~~tmv~~~r~~~L~~l~~~v~~~~-------~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~ 141 (282)
T 2wk1_A 69 EEVRNEGRDWPANAHTMIGIKRLENIRQCVEDVIGNN-------VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVA 141 (282)
T ss_dssp HHHHHTTCSCBSSCSCSSHHHHHHHHHHHHHHHHHTT-------CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEE
T ss_pred HHHHhccccCCcccccccCHHHHHHHHHHHHHHHhcC-------CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEE
Confidence 34777788886543 4677665555666655422 2469999999999988887653 4579999
Q ss_pred eCCHHH--------------------------HHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCC
Q psy3185 148 EFSLFM--------------------------LFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSD 201 (298)
Q Consensus 148 D~S~~M--------------------------l~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~ 201 (298)
|....+ +..++..+.+ . .
T Consensus 142 DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~----------------------------~--------g 185 (282)
T 2wk1_A 142 DSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN----------------------------Y--------D 185 (282)
T ss_dssp ECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH----------------------------T--------T
T ss_pred ECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH----------------------------c--------C
Confidence 964322 2222221110 0 0
Q ss_pred CCCCCCeeEEeccccccccC--CCceeEEEeccccc--CcchHHHHHHHHHHhccCCeEEEE
Q psy3185 202 YNDDCDFSMAAGDFLQVYVH--PNKWDCVATCFFID--CANNIVSFIETIFNILKPGGIWIN 259 (298)
Q Consensus 202 ~~~~~~~~~~~gDf~~~~~~--~~~fD~V~t~ffid--ta~n~~~yl~~I~~~LkpGG~~In 259 (298)
+. ..++.++.|||.+..+. .++||.|. || ..+....+++.+...|+|||++|.
T Consensus 186 l~-~~~I~li~Gda~etL~~~~~~~~d~vf----IDaD~y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 186 LL-DEQVRFLPGWFKDTLPTAPIDTLAVLR----MDGDLYESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp CC-STTEEEEESCHHHHSTTCCCCCEEEEE----ECCCSHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CC-cCceEEEEeCHHHHHhhCCCCCEEEEE----EcCCccccHHHHHHHHHhhcCCCEEEEE
Confidence 10 14789999999876432 35787764 45 334567899999999999999883
No 292
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.25 E-value=0.00078 Score=61.07 Aligned_cols=46 Identities=9% Similarity=-0.094 Sum_probs=33.9
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-CC-eEEEeeCCHHH
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-GY-VCQGNEFSLFM 153 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G~-~v~g~D~S~~M 153 (298)
+++..++. .. .++.+|||+|||.|..+...+++ |. .|.|+|++..|
T Consensus 79 L~ei~eK~-~L----k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~ 126 (282)
T 3gcz_A 79 LRWMEERG-YV----KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQG 126 (282)
T ss_dssp HHHHHHTT-SC----CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred HHHHHHhc-CC----CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCc
Confidence 55555554 22 24669999999999999988854 54 48999998764
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.14 E-value=0.0012 Score=59.20 Aligned_cols=96 Identities=14% Similarity=0.080 Sum_probs=59.2
Q ss_pred CCCCeEEEecccCcHHHHHHHHc-C-CeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccC
Q psy3185 118 PKDVNILVPGAGLGRLAFEIARR-G-YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFP 195 (298)
Q Consensus 118 ~~~~~VLdpGcG~Grla~ela~~-G-~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ip 195 (298)
+++.+|||+||+-|.-+...+++ | -.|.|..+...- +
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~---------~-------------------------------- 110 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG---------H-------------------------------- 110 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT---------S--------------------------------
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc---------c--------------------------------
Confidence 45789999999999999988876 2 234454333210 0
Q ss_pred CCCCCC-CCCCCC-eeEEec-cccccccCCCceeEEEecc-------cccCcchHHHHHHHHHHhccCCe-EEE
Q psy3185 196 DINTSD-YNDDCD-FSMAAG-DFLQVYVHPNKWDCVATCF-------FIDCANNIVSFIETIFNILKPGG-IWI 258 (298)
Q Consensus 196 d~~~~~-~~~~~~-~~~~~g-Df~~~~~~~~~fD~V~t~f-------fidta~n~~~yl~~I~~~LkpGG-~~I 258 (298)
+.|.. .+.+.+ +.+..| ||+++ +...+|+|+|=. .+|++..+. .|+-..+.||||| .|+
T Consensus 111 -~~P~~~~~~Gv~~i~~~~G~Df~~~--~~~~~DvVLSDMAPnSG~~~vD~~Rs~~-aL~~A~~~Lk~gG~~Fv 180 (269)
T 2px2_A 111 -EEPMLMQSYGWNIVTMKSGVDVFYK--PSEISDTLLCDIGESSPSAEIEEQRTLR-ILEMVSDWLSRGPKEFC 180 (269)
T ss_dssp -CCCCCCCSTTGGGEEEECSCCGGGS--CCCCCSEEEECCCCCCSCHHHHHHHHHH-HHHHHHHHHTTCCSEEE
T ss_pred -cCCCcccCCCceEEEeeccCCccCC--CCCCCCEEEeCCCCCCCccHHHHHHHHH-HHHHHHHHhhcCCcEEE
Confidence 01100 001112 234557 99885 346899998733 455554444 6766778999999 776
No 294
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.07 E-value=0.0013 Score=58.54 Aligned_cols=54 Identities=20% Similarity=0.206 Sum_probs=44.4
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHH
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFIL 161 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l 161 (298)
+++.+.+.+. .++..||||.||+|..+.+.++.|..+.|+|+++.++..++..+
T Consensus 201 l~~~~i~~~~-----~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~ 254 (260)
T 1g60_A 201 LIERIIRASS-----NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVL 254 (260)
T ss_dssp HHHHHHHHHC-----CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHhC-----CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence 4555544432 24679999999999999999999999999999999999887744
No 295
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.06 E-value=0.0036 Score=58.75 Aligned_cols=107 Identities=16% Similarity=0.116 Sum_probs=72.5
Q ss_pred CCCeEEEecccCcHHHHHHHHcCC--eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGY--VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~--~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||..||.|.=+..||..+. .|+++|.|..-+...+..+.+... ..
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~----------------------------~~ 199 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVP----------------------------EE 199 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSC----------------------------TT
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhh----------------------------hh
Confidence 577999999999999999999875 599999999987766654443110 00
Q ss_pred CCCCCCCCCCCeeEEecccccccc-CCCceeEEEe-----c---cccc---------Ccch-------HHHHHHHHHHhc
Q psy3185 197 INTSDYNDDCDFSMAAGDFLQVYV-HPNKWDCVAT-----C---FFID---------CANN-------IVSFIETIFNIL 251 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~gDf~~~~~-~~~~fD~V~t-----~---ffid---------ta~n-------~~~yl~~I~~~L 251 (298)
+....++.+...|...+.. ..++||.|+. . -.+. +..+ ..+.|+...++|
T Consensus 200 -----~~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~l 274 (359)
T 4fzv_A 200 -----IRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLAT 274 (359)
T ss_dssp -----TTTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTE
T ss_pred -----hccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 0012467788888877643 3578998752 2 1111 1111 135778888999
Q ss_pred cCCeEEE
Q psy3185 252 KPGGIWI 258 (298)
Q Consensus 252 kpGG~~I 258 (298)
||||++|
T Consensus 275 kpGG~LV 281 (359)
T 4fzv_A 275 KPGGHVV 281 (359)
T ss_dssp EEEEEEE
T ss_pred CCCcEEE
Confidence 9999987
No 296
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.80 E-value=0.0098 Score=55.20 Aligned_cols=40 Identities=8% Similarity=0.090 Sum_probs=35.4
Q ss_pred CCeEEEecccCcHHHHHHHHcC--Ce-EEEeeCCHHHHHHHHH
Q psy3185 120 DVNILVPGAGLGRLAFEIARRG--YV-CQGNEFSLFMLFASNF 159 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G--~~-v~g~D~S~~Ml~~a~~ 159 (298)
+.+|||+-||.|.++..+.+.| ++ |.++|++...+...+.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~ 44 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKY 44 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHH
Confidence 4689999999999999999999 54 8999999998887665
No 297
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.80 E-value=0.0077 Score=54.93 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=29.5
Q ss_pred CCCeEEEecccCcHHHHHHHHc-CC-eEEEeeCCHHH
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-GY-VCQGNEFSLFM 153 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G~-~v~g~D~S~~M 153 (298)
++.+|||+|||.|..+..++++ |. .|.|+|++..|
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~ 117 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEG 117 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccc
Confidence 5789999999999999999975 54 58899998643
No 298
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.73 E-value=0.023 Score=52.46 Aligned_cols=41 Identities=17% Similarity=0.232 Sum_probs=36.1
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCe-EEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYV-CQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~-v~g~D~S~~Ml~~a~~ 159 (298)
.+.+|||+.||.|.++..+.+.|++ |.++|++...+...+.
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~ 51 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEM 51 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHH
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHH
Confidence 3579999999999999999999998 7799999998776654
No 299
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.61 E-value=0.011 Score=54.31 Aligned_cols=71 Identities=23% Similarity=0.288 Sum_probs=50.9
Q ss_pred CeeEEecccccccc--CCCceeEEEec-ccccCcchH----HHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCCC
Q psy3185 207 DFSMAAGDFLQVYV--HPNKWDCVATC-FFIDCANNI----VSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPS 279 (298)
Q Consensus 207 ~~~~~~gDf~~~~~--~~~~fD~V~t~-ffidta~n~----~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ls 279 (298)
.+.+..||..+... +..++|+|.-= |. .+.|+ .++++.|+++++|||+++. |-.
T Consensus 167 ~L~l~~GDa~~~l~~l~~~~~Da~flDgFs--P~kNPeLWs~e~f~~l~~~~~pgg~laT-----Yta------------ 227 (308)
T 3vyw_A 167 SLKVLLGDARKRIKEVENFKADAVFHDAFS--PYKNPELWTLDFLSLIKERIDEKGYWVS-----YSS------------ 227 (308)
T ss_dssp EEEEEESCHHHHGGGCCSCCEEEEEECCSC--TTTSGGGGSHHHHHHHHTTEEEEEEEEE-----SCC------------
T ss_pred EEEEEechHHHHHhhhcccceeEEEeCCCC--cccCcccCCHHHHHHHHHHhCCCcEEEE-----EeC------------
Confidence 56788999877654 23478887532 22 33333 4799999999999999984 322
Q ss_pred HHHHHHHHHhCCCEEEE
Q psy3185 280 YEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 280 ~eEl~~~~~~~GF~i~~ 296 (298)
.-.+++.+.++||++.+
T Consensus 228 ag~VRR~L~~aGF~V~k 244 (308)
T 3vyw_A 228 SLSVRKSLLTLGFKVGS 244 (308)
T ss_dssp CHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHCCCEEEe
Confidence 35688889999999875
No 300
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.47 E-value=0.0066 Score=55.47 Aligned_cols=49 Identities=22% Similarity=0.333 Sum_probs=33.3
Q ss_pred EEeccccccccCCCceeEEEeccc------ccC----cchHHH-HHHHHHHhccCCeEEEE
Q psy3185 210 MAAGDFLQVYVHPNKWDCVATCFF------IDC----ANNIVS-FIETIFNILKPGGIWIN 259 (298)
Q Consensus 210 ~~~gDf~~~~~~~~~fD~V~t~ff------idt----a~n~~~-yl~~I~~~LkpGG~~In 259 (298)
++.||+.++.. .++||+|+|=+. .|. ...+.+ .++-+.+.|||||.++.
T Consensus 156 ~IqGD~~~~~~-~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvV 215 (344)
T 3r24_A 156 TLIGDCATVHT-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 215 (344)
T ss_dssp EEESCGGGEEE-SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEcccccccc-CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEE
Confidence 48999877654 588999987432 232 223444 45556679999999973
No 301
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.32 E-value=0.032 Score=52.52 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=34.5
Q ss_pred CeEEEecccCcHHHHHHHHcCCe-EEEeeCCHHHHHHHHH
Q psy3185 121 VNILVPGAGLGRLAFEIARRGYV-CQGNEFSLFMLFASNF 159 (298)
Q Consensus 121 ~~VLdpGcG~Grla~ela~~G~~-v~g~D~S~~Ml~~a~~ 159 (298)
.+|||+-||.|.++..+.+.|++ |.|+|++.......+.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~ 42 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAI 42 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHH
Confidence 68999999999999999999998 6699999998766553
No 302
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.24 E-value=0.0067 Score=50.96 Aligned_cols=39 Identities=23% Similarity=0.094 Sum_probs=31.6
Q ss_pred CCCeEEEecc--cCcHHHHHHHH-cCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGA--GLGRLAFEIAR-RGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGc--G~Grla~ela~-~G~~v~g~D~S~~Ml~~a 157 (298)
++.+||+.|+ |.|+.+..+++ .|++|.+++.+...+..+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 79 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 4679999994 77888888776 599999999998876544
No 303
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.18 E-value=0.0077 Score=56.14 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=34.4
Q ss_pred CCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.|+|. |.++..+|+. |+ .|.++|.|..-+..++.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 467999999976 8889999875 88 79999999987776654
No 304
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.16 E-value=0.0071 Score=55.46 Aligned_cols=42 Identities=19% Similarity=0.208 Sum_probs=35.6
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|||. |.++..+|+. |.+|.++|.|..-+..++.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR 208 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 3577999999985 9999999985 9999999999988776654
No 305
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.13 E-value=0.048 Score=50.50 Aligned_cols=154 Identities=15% Similarity=0.127 Sum_probs=85.7
Q ss_pred CCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
...|+.+|||+...++.|... +..+.-+|+ +.++..-+.++........ .+ .. .. .-+..
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~-~l----~~-------~~-----~~~~~ 159 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRI-SL----GL-------SK-----EDTAK 159 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHH-HH----TC-------CS-----SCCCC
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhh-hc----cc-------cc-----ccccc
Confidence 468999999999999999875 456778888 6666655555443211000 00 00 00 00000
Q ss_pred CCCCCCCCCCeeEEecccccccc---------CCCceeEEEecccc--cCcchHHHHHHHHHHhccCCeEEEEecccc--
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYV---------HPNKWDCVATCFFI--DCANNIVSFIETIFNILKPGGIWINLGPLL-- 264 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~---------~~~~fD~V~t~ffi--dta~n~~~yl~~I~~~LkpGG~~In~gPl~-- 264 (298)
....+ ...+..++.+|+.+..- +.+...++++--.+ =+.+.....|+.|.+.. |||.+|++.++.
T Consensus 160 ~~~~~-~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~ 237 (334)
T 1rjd_A 160 SPFLI-DQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGS 237 (334)
T ss_dssp TTEEE-ECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCC
T ss_pred ccccc-CCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCC
Confidence 00000 12478889899876411 12333444432211 24556778888888877 889888653321
Q ss_pred -----------ccccC-C-CCCCcc--CCCHHHHHHHHHhCCCE
Q psy3185 265 -----------YHYSN-M-LNEDSI--EPSYEVVKQVIQGLGFV 293 (298)
Q Consensus 265 -----------y~~~~-~-~~~~~~--~ls~eEl~~~~~~~GF~ 293 (298)
+++.. . ..-.++ -.+.++..+.+.+.||.
T Consensus 238 ~~~~~fg~~m~~~l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 238 QPNDRFGAIMQSNLKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp STTCCHHHHHHHHHHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred CCcchHHHHHHHHhhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 11111 0 001222 25899999999999997
No 306
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.07 E-value=0.01 Score=55.06 Aligned_cols=42 Identities=19% Similarity=0.113 Sum_probs=35.0
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|||. |.++..+|+. |. .|.++|.|..-+..++.
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 3567999999986 8899999975 88 69999999988776654
No 307
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.06 E-value=0.027 Score=49.90 Aligned_cols=96 Identities=15% Similarity=0.142 Sum_probs=61.6
Q ss_pred CCCeEEEecccCcHHHHHHHHc-CC-eEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-GY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+||+.|..+...+.+ |. .|.|+|.-..= + ..|.
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~g---------h-----------------------------e~P~ 119 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPG---------H-----------------------------EEPV 119 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTT---------S-----------------------------CCCC
T ss_pred CCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCC---------c-----------------------------cCcc
Confidence 5679999999999999977765 65 49999987530 1 0111
Q ss_pred CCCCCCCCCCCeeEEec-cccccccCCCceeEEEecc-------cccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 197 INTSDYNDDCDFSMAAG-DFLQVYVHPNKWDCVATCF-------FIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~g-Df~~~~~~~~~fD~V~t~f-------fidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
+.. ++. -..+.|..| |+..+. +..+|.|+|-. .+|.+.. ...|+-+.+.|++ |.|+
T Consensus 120 ~~~-s~g-wn~v~fk~gvDv~~~~--~~~~DtllcDIgeSs~~~~vE~~Rt-lrvLela~~wL~~-~~fc 183 (267)
T 3p8z_A 120 PMS-TYG-WNIVKLMSGKDVFYLP--PEKCDTLLCDIGESSPSPTVEESRT-IRVLKMVEPWLKN-NQFC 183 (267)
T ss_dssp CCC-CTT-TTSEEEECSCCGGGCC--CCCCSEEEECCCCCCSCHHHHHHHH-HHHHHHHGGGCSS-CEEE
T ss_pred hhh-hcC-cCceEEEeccceeecC--CccccEEEEecCCCCCChhhhhhHH-HHHHHHHHHhccc-CCEE
Confidence 111 111 147889999 986554 36799887633 2222221 2367777888999 6665
No 308
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.89 E-value=0.023 Score=52.22 Aligned_cols=42 Identities=19% Similarity=0.043 Sum_probs=34.7
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|+|. |.++..+|+. |.+|.+++.|..-+..++.
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS 218 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh
Confidence 3578999999986 8899999875 9999999999887766543
No 309
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.86 E-value=0.021 Score=53.57 Aligned_cols=41 Identities=24% Similarity=0.166 Sum_probs=34.8
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLFASN 158 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~~a~ 158 (298)
.++.+||+.|||. |.++..+|+. |. .|.++|.|...+..++
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 3577999999986 9999999985 98 8999999998877654
No 310
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.77 E-value=0.016 Score=53.40 Aligned_cols=42 Identities=14% Similarity=-0.059 Sum_probs=34.8
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|+|. |.++..+|+. |. .|.++|.+..-+..++.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 3577999999986 8899999986 88 79999999987776654
No 311
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.70 E-value=0.12 Score=47.65 Aligned_cols=42 Identities=17% Similarity=0.065 Sum_probs=35.4
Q ss_pred CCCCeEEEecccCcHHHHHHHHcCC--e-E-EEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGLGRLAFEIARRGY--V-C-QGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~Grla~ela~~G~--~-v-~g~D~S~~Ml~~a~~ 159 (298)
+...+++|+-||.|.+..-+.+.|+ + | .|+|+++......+.
T Consensus 8 ~~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~ 53 (327)
T 3qv2_A 8 QKQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSK 53 (327)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHH
T ss_pred CCCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHH
Confidence 3467999999999999999999995 6 5 699999998776554
No 312
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.66 E-value=0.064 Score=48.93 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=60.6
Q ss_pred CCCeEEEecccCcHHHHHHHHc-CCe-EEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCC
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR-GYV-CQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPD 196 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~-G~~-v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd 196 (298)
++.+|||+||++|..+...+.+ |.. |.|+|.-..= + .+ |.
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~---------h-e~----------------------------P~ 135 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPG---------H-EE----------------------------PQ 135 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTT---------S-CC----------------------------CC
T ss_pred CCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCC---------c-cC----------------------------cc
Confidence 4669999999999999977765 654 9999987640 0 00 11
Q ss_pred CCCCCCCCCCCeeEEec-cccccccCCCceeEEEecccccCcchH-------HHHHHHHHHhccCC-eEEEE
Q psy3185 197 INTSDYNDDCDFSMAAG-DFLQVYVHPNKWDCVATCFFIDCANNI-------VSFIETIFNILKPG-GIWIN 259 (298)
Q Consensus 197 ~~~~~~~~~~~~~~~~g-Df~~~~~~~~~fD~V~t~ffidta~n~-------~~yl~~I~~~LkpG-G~~In 259 (298)
+.. .+.. ..+.+..+ |+..+.+ ..+|.|++=.- .+.++. ...|+-+.+.|++| |-|+.
T Consensus 136 ~~~-ql~w-~lV~~~~~~Dv~~l~~--~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 136 LVQ-SYGW-NIVTMKSGVDVFYRPS--ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp CCC-BTTG-GGEEEECSCCTTSSCC--CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred hhh-hcCC-cceEEEeccCHhhCCC--CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 000 0111 23666777 7766543 56888776433 333321 23666667889988 88763
No 313
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.65 E-value=0.018 Score=53.69 Aligned_cols=41 Identities=20% Similarity=0.103 Sum_probs=34.3
Q ss_pred CCCeEEEecccC-cHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.|+|. |.++..+|+. |..|.+++.|..-+..++.
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 577999999984 8899999874 9999999999987776654
No 314
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.65 E-value=0.021 Score=53.34 Aligned_cols=40 Identities=13% Similarity=-0.067 Sum_probs=34.6
Q ss_pred CCeEEEecccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHH
Q psy3185 120 DVNILVPGAGLGRLAFEIARR--GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~ 159 (298)
+..||++|.|+|.|+..|+.+ +..|+++|....++..-+.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~ 100 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNA 100 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHH
Confidence 578999999999999999986 5689999999998765443
No 315
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.64 E-value=0.019 Score=52.44 Aligned_cols=40 Identities=23% Similarity=0.174 Sum_probs=33.3
Q ss_pred CCCCeEEEecc--cCcHHHHHHHHc-CCeEEEeeCCHHHHHHH
Q psy3185 118 PKDVNILVPGA--GLGRLAFEIARR-GYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 118 ~~~~~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~~Ml~~a 157 (298)
.++.+||+.|| |.|..+..+|+. |++|.+++-|..-+..+
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL 190 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 35779999998 789999998864 99999999998766544
No 316
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.62 E-value=0.023 Score=51.78 Aligned_cols=41 Identities=22% Similarity=0.194 Sum_probs=33.6
Q ss_pred CCCCeEEEecc--cCcHHHHHHHH-cCCeEEEeeCCHHHHHHHH
Q psy3185 118 PKDVNILVPGA--GLGRLAFEIAR-RGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 118 ~~~~~VLdpGc--G~Grla~ela~-~G~~v~g~D~S~~Ml~~a~ 158 (298)
.++.+||+.|| |.|..+..+++ .|++|.++|.|...+..++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 187 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK 187 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 35679999998 88988888776 5999999999988776553
No 317
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=95.59 E-value=0.039 Score=51.33 Aligned_cols=50 Identities=12% Similarity=-0.031 Sum_probs=39.4
Q ss_pred HHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc-C--CeEEEeeCCHHHHHHH
Q psy3185 104 ISEILARFPPETINPKDVNILVPGAGLGRLAFEIARR-G--YVCQGNEFSLFMLFAS 157 (298)
Q Consensus 104 ~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~-G--~~v~g~D~S~~Ml~~a 157 (298)
++++.+.+.. .++..++|..||.|..+..|+++ | ..|+|+|.++.++..+
T Consensus 46 l~Evl~~L~i----~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A 98 (347)
T 3tka_A 46 LDEAVNGLNI----RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVA 98 (347)
T ss_dssp THHHHHHTCC----CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHH
T ss_pred HHHHHHhhCC----CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence 3444444432 35789999999999999999987 4 4799999999999876
No 318
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.57 E-value=0.03 Score=51.49 Aligned_cols=41 Identities=24% Similarity=0.157 Sum_probs=34.0
Q ss_pred CCCeEEEecccC-cHHHHHHHH-cCCeEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIAR-RGYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela~-~G~~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.|||. |.++..+|+ .|+.|.++|.|..-+..++.
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 467999999985 888888887 49999999999987766553
No 319
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.55 E-value=0.025 Score=51.18 Aligned_cols=41 Identities=20% Similarity=0.273 Sum_probs=33.7
Q ss_pred CCCCeEEEeccc-CcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAG-LGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG-~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
+++.+||+.||| .|.++..+|+. |.+|.+++ |..-+..++.
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~ 183 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK 183 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH
Confidence 457899999997 58999999976 99999999 8876665544
No 320
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.51 E-value=0.018 Score=53.19 Aligned_cols=41 Identities=24% Similarity=0.252 Sum_probs=33.9
Q ss_pred CCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.|||. |.++..+|+. |. .|.++|.|..-+..++.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 467999999985 8899999874 88 89999999987666543
No 321
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.47 E-value=0.089 Score=49.40 Aligned_cols=42 Identities=21% Similarity=0.120 Sum_probs=34.6
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|+|. |.++..+|+. |. .|.++|.|..-+..++.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 4577999999875 8888888875 88 89999999987776654
No 322
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.43 E-value=0.03 Score=56.47 Aligned_cols=70 Identities=20% Similarity=0.301 Sum_probs=50.9
Q ss_pred CCeeEEeccccccccC-----CCceeEEEecccccCc-c--hH----HHHHHHHHHhccCCeEEEEeccccccccCCCCC
Q psy3185 206 CDFSMAAGDFLQVYVH-----PNKWDCVATCFFIDCA-N--NI----VSFIETIFNILKPGGIWINLGPLLYHYSNMLNE 273 (298)
Q Consensus 206 ~~~~~~~gDf~~~~~~-----~~~fD~V~t~ffidta-~--n~----~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~ 273 (298)
..+.+..||..+.... .+.+|++ |+|-. + |. .+++..|.++++|||.+..++ .
T Consensus 148 ~~l~l~~gd~~~~l~~~~~~~~~~~da~----flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~-----~------ 212 (689)
T 3pvc_A 148 ITLDLWFGDVNTLLPTLDDSLNNQVDAW----FLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT-----A------ 212 (689)
T ss_dssp EEEEEEESCHHHHGGGCCGGGTTCEEEE----EECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC-----C------
T ss_pred EEEEEEccCHHHHHhhcccccCCceeEE----EECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc-----C------
Confidence 4688999999876542 3678876 45522 1 22 679999999999999886421 1
Q ss_pred CccCCCHHHHHHHHHhCCCEEEE
Q psy3185 274 DSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 274 ~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
...+++.+.++||.+.+
T Consensus 213 ------~~~vr~~l~~aGf~~~~ 229 (689)
T 3pvc_A 213 ------AGFVRRGLQQAGFNVTK 229 (689)
T ss_dssp ------CHHHHHHHHHTTCEEEE
T ss_pred ------cHHHHHHHHhCCeEEEe
Confidence 25789999999999865
No 323
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.40 E-value=0.04 Score=50.82 Aligned_cols=41 Identities=20% Similarity=0.107 Sum_probs=34.7
Q ss_pred CCCeEEEecccC-cHHHHHHHHc-CCe-EEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIARR-GYV-CQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela~~-G~~-v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.|+|. |.++..+|+. |.. |.++|.|..-+..++.
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 222 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE 222 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 567999999976 8899999975 887 9999999988777665
No 324
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.40 E-value=0.021 Score=51.69 Aligned_cols=90 Identities=18% Similarity=0.224 Sum_probs=54.1
Q ss_pred CCeeEEecccccccc--CCCceeEEEec--ccccC------------------cchHHHHHHHHHHhccCCeEE-EEecc
Q psy3185 206 CDFSMAAGDFLQVYV--HPNKWDCVATC--FFIDC------------------ANNIVSFIETIFNILKPGGIW-INLGP 262 (298)
Q Consensus 206 ~~~~~~~gDf~~~~~--~~~~fD~V~t~--ffidt------------------a~n~~~yl~~I~~~LkpGG~~-In~gP 262 (298)
....+..||..++.. ++++||+|+|. |+... ...+...++++.++|||||.+ +++|.
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 356799999988532 46899999986 44211 011345678899999999976 45554
Q ss_pred ccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 263 LLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 263 l~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
....... .+...+..-.+++..++++.||.+..
T Consensus 100 ~~~~~~~-~g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 100 VAVARRR-FGRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EEEECC-----EEEECHHHHHHHHHHHTTCEEEE
T ss_pred Ccccccc-CCcccccccHHHHHHHHHHcCCeeec
Confidence 2111000 00000111246788899999998754
No 325
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.32 E-value=0.19 Score=45.63 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=33.7
Q ss_pred CeEEEecccCcHHHHHHHHcCCe-EEEeeCCHHHHHHHHH
Q psy3185 121 VNILVPGAGLGRLAFEIARRGYV-CQGNEFSLFMLFASNF 159 (298)
Q Consensus 121 ~~VLdpGcG~Grla~ela~~G~~-v~g~D~S~~Ml~~a~~ 159 (298)
.+|||+=||.|.+..-|-+.|++ |.++|++.......+.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~ 40 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYES 40 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHH
Confidence 47999999999999999999998 6699999988776553
No 326
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=95.30 E-value=0.058 Score=48.79 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=32.4
Q ss_pred eEEEecc--cCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 122 NILVPGA--GLGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 122 ~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
+||+.|| |.|.++..+|+. |.+|.+++-|..-+..++.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~ 189 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS 189 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 4999997 789999999975 9999999999887766654
No 327
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.29 E-value=0.01 Score=53.48 Aligned_cols=40 Identities=25% Similarity=0.215 Sum_probs=33.2
Q ss_pred CCCeEEEecc--cCcHHHHHHHHc-CCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGA--GLGRLAFEIARR-GYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~~Ml~~a~ 158 (298)
++.+||+.|+ |.|.++..+|+. |.+|.+++-|..-+..++
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 167 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL 167 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4679999998 789999998874 899999999887665554
No 328
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.29 E-value=0.021 Score=52.23 Aligned_cols=42 Identities=12% Similarity=0.046 Sum_probs=34.7
Q ss_pred CCCCeEEEeccc--CcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAG--LGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG--~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
+++.+||+.||| .|.++..+|+. |.+|.+++.|..-+..++.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 357799999986 89999999875 9999999999887666554
No 329
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.26 E-value=0.033 Score=50.90 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=33.8
Q ss_pred CCCCeEEEecc--cCcHHHHHHHH-cCCeEEEeeCCHHHHHHHH
Q psy3185 118 PKDVNILVPGA--GLGRLAFEIAR-RGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 118 ~~~~~VLdpGc--G~Grla~ela~-~G~~v~g~D~S~~Ml~~a~ 158 (298)
.++.+||+.|| |.|.++..+|+ .|+.|.+++-|..-+..++
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~ 197 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK 197 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 35679999997 78999999887 5999999999988766543
No 330
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.18 E-value=0.025 Score=51.86 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=33.0
Q ss_pred CCCeEEEeccc-CcHHHHHHHHc-CCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGAG-LGRLAFEIARR-GYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGcG-~Grla~ela~~-G~~v~g~D~S~~Ml~~a~ 158 (298)
++.+||+.|+| .|.++..+|+. |++|.+++.|..-+..++
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 205 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK 205 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 46799999986 68888888864 999999999988776554
No 331
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.17 E-value=0.028 Score=51.29 Aligned_cols=42 Identities=17% Similarity=0.063 Sum_probs=34.2
Q ss_pred CCCCeEEEecc--cCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGA--GLGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|+ |.|.++..+|+. |.+|.+++-+..-+..++.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 35779999994 789999998875 9999999999887765543
No 332
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.09 E-value=0.22 Score=45.98 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=34.2
Q ss_pred CCeEEEecccCcHHHHHHHHcCC--e-EEEeeCCHHHHHHHHH
Q psy3185 120 DVNILVPGAGLGRLAFEIARRGY--V-CQGNEFSLFMLFASNF 159 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~~G~--~-v~g~D~S~~Ml~~a~~ 159 (298)
..+++|+-||.|.+...+.+.|+ + |.|+|+++......+.
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~ 45 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKH 45 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHH
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHH
Confidence 46899999999999999999996 5 7799999998766553
No 333
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.08 E-value=0.039 Score=51.60 Aligned_cols=42 Identities=26% Similarity=0.214 Sum_probs=34.8
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|||. |.++..+|+. |. .|.++|.|..-+..++.
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 3567999999976 8999999985 88 69999999988776654
No 334
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.08 E-value=0.024 Score=51.95 Aligned_cols=40 Identities=15% Similarity=-0.008 Sum_probs=33.0
Q ss_pred CCeEEEecccC-cHHHHHHHH-c--CCeEEEeeCCHHHHHHHHH
Q psy3185 120 DVNILVPGAGL-GRLAFEIAR-R--GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 120 ~~~VLdpGcG~-Grla~ela~-~--G~~v~g~D~S~~Ml~~a~~ 159 (298)
+.+||+.|+|. |.++..+|+ . |..|.+++.|..-+..++.
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 67999999974 888888886 4 8999999999987766554
No 335
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.05 E-value=0.12 Score=47.66 Aligned_cols=42 Identities=19% Similarity=0.091 Sum_probs=34.6
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|||. |.++..+|+. |..|.+++.|..-+..++.
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Confidence 3577999999886 8888888875 9999999999887766554
No 336
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.95 E-value=0.051 Score=50.29 Aligned_cols=41 Identities=17% Similarity=0.167 Sum_probs=33.8
Q ss_pred CCCeEEEec--ccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPG--AGLGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpG--cG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.| .|.|.++..+|+. |+.|.+++-|..-+..++.
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 567999999 5789999999874 9999999999876665543
No 337
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.92 E-value=0.032 Score=51.88 Aligned_cols=42 Identities=19% Similarity=0.143 Sum_probs=34.5
Q ss_pred CCCCeEEEeccc-CcHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAG-LGRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG-~Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.||| .|.++..+|+. |. .|.++|.|..-+..++.
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 357799999997 48899999876 98 79999999987776553
No 338
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.89 E-value=0.033 Score=50.63 Aligned_cols=42 Identities=24% Similarity=0.150 Sum_probs=34.5
Q ss_pred CCCCeEEEec--ccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPG--AGLGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpG--cG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.| .|.|.++..+|+. |.+|.+++-|..-+..++.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3577999999 4789999998875 9999999999987766553
No 339
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.88 E-value=0.59 Score=45.37 Aligned_cols=56 Identities=11% Similarity=0.069 Sum_probs=41.9
Q ss_pred HHHHHhhCCCCC--CCCCCCeEEEecccCcHHHHHHHHcCCe-EEEeeCCHHHHHHHHH
Q psy3185 104 ISEILARFPPET--INPKDVNILVPGAGLGRLAFEIARRGYV-CQGNEFSLFMLFASNF 159 (298)
Q Consensus 104 ~~~l~~~~p~~~--~~~~~~~VLdpGcG~Grla~ela~~G~~-v~g~D~S~~Ml~~a~~ 159 (298)
++.|...+|... ......+++|+=||.|.++.-+.+.|++ |.++|+++......+.
T Consensus 70 ~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~ 128 (482)
T 3me5_A 70 FAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKA 128 (482)
T ss_dssp HHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHH
T ss_pred HHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHH
Confidence 355666655321 1234578999999999999999999998 7899999987766543
No 340
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.81 E-value=0.033 Score=51.08 Aligned_cols=42 Identities=24% Similarity=0.173 Sum_probs=34.7
Q ss_pred CCCCeEEEecc--cCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGA--GLGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|| |.|.++..+|+. |+.|.+++-|..-+..++.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS 202 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 35779999997 789999999875 9999999999887765554
No 341
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.79 E-value=0.034 Score=50.97 Aligned_cols=42 Identities=24% Similarity=0.122 Sum_probs=34.8
Q ss_pred CCCCeEEEecc--cCcHHHHHHHH-cCCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGA--GLGRLAFEIAR-RGYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGc--G~Grla~ela~-~G~~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|+ |.|.++..+++ .|+.|.+++-|..-+..++.
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 35679999998 78999999887 59999999999887766543
No 342
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.77 E-value=0.0065 Score=69.84 Aligned_cols=74 Identities=12% Similarity=0.055 Sum_probs=25.6
Q ss_pred CCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccc---cc----cccCCCC-CCccCCCHHHHHHHHHhCCCE
Q psy3185 222 PNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPL---LY----HYSNMLN-EDSIEPSYEVVKQVIQGLGFV 293 (298)
Q Consensus 222 ~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl---~y----~~~~~~~-~~~~~ls~eEl~~~~~~~GF~ 293 (298)
..+||+|+.+..++..+++...+..++++|||||+++-..+. .. .+-.... ...-.++.+++.+++...||.
T Consensus 1309 ~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~gf~ 1388 (2512)
T 2vz8_A 1309 LGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMVGFLTSPEQGGRHLLSQDQWESLFAGASLH 1388 (2512)
T ss_dssp ---CCEEEEECC--------------------CCEEEEEEC--------------------------CTTTTSSTTTTEE
T ss_pred CCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccccccccccccccccccCCcccCHHHHHHHHHhCCCc
Confidence 457999999888988889999999999999999998753221 00 0000000 001225666677778888887
Q ss_pred EE
Q psy3185 294 YE 295 (298)
Q Consensus 294 i~ 295 (298)
.+
T Consensus 1389 ~~ 1390 (2512)
T 2vz8_A 1389 LV 1390 (2512)
T ss_dssp EE
T ss_pred ee
Confidence 65
No 343
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.75 E-value=0.036 Score=50.87 Aligned_cols=40 Identities=28% Similarity=0.244 Sum_probs=33.3
Q ss_pred CCCeEEEecc--cCcHHHHHHHH-cCCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGA--GLGRLAFEIAR-RGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGc--G~Grla~ela~-~G~~v~g~D~S~~Ml~~a~ 158 (298)
++.+||+.|+ |.|..+..+++ .|++|.+++.|...+..++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~ 211 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR 211 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH
Confidence 5679999999 78998888886 5999999999988765544
No 344
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.65 E-value=0.071 Score=49.36 Aligned_cols=42 Identities=17% Similarity=-0.079 Sum_probs=34.0
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
+++.+||+.|||. |.++..+|+. |. .|.++|.|..-+..++.
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 3567999999974 8888899875 88 79999999887766553
No 345
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.55 E-value=0.056 Score=49.57 Aligned_cols=44 Identities=16% Similarity=-0.007 Sum_probs=39.7
Q ss_pred CCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHh
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILN 162 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~ 162 (298)
++..||||=||+|..+.+..+.|-...|+|+++.+...++..+.
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~ 295 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFL 295 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGS
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999988876443
No 346
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.53 E-value=0.069 Score=49.47 Aligned_cols=42 Identities=14% Similarity=0.014 Sum_probs=34.0
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|+|. |.++..+|+. |. .|.++|.|+.-+..++.
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 3567999999875 8888888875 88 79999999987776653
No 347
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.53 E-value=0.029 Score=51.83 Aligned_cols=41 Identities=15% Similarity=0.012 Sum_probs=33.4
Q ss_pred CCCeEEEeccc-CcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAG-LGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG-~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.|+| .|.++..+|+. |..|.+++.|..-+..++.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK 221 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 56799999986 48888888874 9999999999887766554
No 348
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.52 E-value=0.056 Score=49.19 Aligned_cols=40 Identities=20% Similarity=0.200 Sum_probs=32.8
Q ss_pred CCCeEEEecc--cCcHHHHHHHH-cCCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGA--GLGRLAFEIAR-RGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGc--G~Grla~ela~-~G~~v~g~D~S~~Ml~~a~ 158 (298)
++.+||+.|+ |.|..+..+++ .|+.|.+++-+..-+..++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~ 187 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR 187 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 5679999995 78998888876 5999999999987666554
No 349
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.50 E-value=0.077 Score=48.91 Aligned_cols=40 Identities=30% Similarity=0.227 Sum_probs=32.8
Q ss_pred CCCeEEEecc--cCcHHHHHHHH-cCCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGA--GLGRLAFEIAR-RGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGc--G~Grla~ela~-~G~~v~g~D~S~~Ml~~a~ 158 (298)
++.+||+.|+ |.|..+..+++ .|+.|.+++-|..-+..++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 212 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL 212 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Confidence 5679999997 78888888876 5999999999988666543
No 350
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.47 E-value=0.067 Score=49.06 Aligned_cols=41 Identities=29% Similarity=0.324 Sum_probs=33.1
Q ss_pred CCCeEEEeccc-CcHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAG-LGRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG-~Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.|+| .|.++..+|+. |+ .|++++-|..-+..++.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 56799999997 48888888874 98 89999999887665543
No 351
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.40 E-value=0.089 Score=48.63 Aligned_cols=42 Identities=14% Similarity=-0.020 Sum_probs=34.2
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|+|. |.++..+|+. |. .|.++|.|..-+..++.
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 3567999999875 8888888875 88 79999999987776654
No 352
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.32 E-value=0.066 Score=49.06 Aligned_cols=41 Identities=32% Similarity=0.381 Sum_probs=33.6
Q ss_pred CCCeEEEeccc--CcHHHHHHHH-c-CCeEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAG--LGRLAFEIAR-R-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG--~Grla~ela~-~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.|+| .|..+..+++ . |++|.++|.|...+..++.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 56799999998 8888888776 4 9999999999987766543
No 353
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.29 E-value=0.27 Score=45.79 Aligned_cols=114 Identities=17% Similarity=0.160 Sum_probs=68.4
Q ss_pred CCeEEEecccC-c-HHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGL-G-RLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~-G-rla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
..+|-++|+|. | .++..|++.|++|++.|.++.-+..... . . +
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~---~--g-----~------------------------- 66 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALER---E--G-----I------------------------- 66 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT---T--T-----C-------------------------
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH---C--C-----C-------------------------
Confidence 46899999874 2 2566677789999999999875443221 0 0 0
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccC
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIE 277 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ 277 (298)
. ...+..++.......|+|++|---+ .+.+.++.+...|+||-++|+.+-..+..
T Consensus 67 -----------~-~~~s~~e~~~~a~~~DvVi~~vp~~---~v~~vl~~l~~~l~~g~iiId~st~~~~~---------- 121 (358)
T 4e21_A 67 -----------A-GARSIEEFCAKLVKPRVVWLMVPAA---VVDSMLQRMTPLLAANDIVIDGGNSHYQD---------- 121 (358)
T ss_dssp -----------B-CCSSHHHHHHHSCSSCEEEECSCGG---GHHHHHHHHGGGCCTTCEEEECSSCCHHH----------
T ss_pred -----------E-EeCCHHHHHhcCCCCCEEEEeCCHH---HHHHHHHHHHhhCCCCCEEEeCCCCChHH----------
Confidence 0 0011222211123458888775332 56678889999999999999765432221
Q ss_pred CCHHHHHHHHHhCCCEEE
Q psy3185 278 PSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 278 ls~eEl~~~~~~~GF~i~ 295 (298)
..++.+.+.+.|...+
T Consensus 122 --~~~~~~~l~~~g~~~v 137 (358)
T 4e21_A 122 --DIRRADQMRAQGITYV 137 (358)
T ss_dssp --HHHHHHHHHTTTCEEE
T ss_pred --HHHHHHHHHHCCCEEE
Confidence 3445555666666544
No 354
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.24 E-value=0.49 Score=37.27 Aligned_cols=38 Identities=18% Similarity=-0.015 Sum_probs=28.0
Q ss_pred CCeEEEecccC-cH-HHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 120 DVNILVPGAGL-GR-LAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 120 ~~~VLdpGcG~-Gr-la~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
..+|+++|||. |+ ++..|.+.|+.|+++|.++.-+..+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~ 46 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDEL 46 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 46899999864 32 4445556799999999999866543
No 355
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.22 E-value=0.062 Score=49.46 Aligned_cols=42 Identities=24% Similarity=0.254 Sum_probs=34.1
Q ss_pred CCCCeEEEec--ccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPG--AGLGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpG--cG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
+++.+||+.| .|.|.++..+|+. |+.|.+++.|..-+..++.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 210 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER 210 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 3577999995 4679999998875 9999999999987766654
No 356
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.21 E-value=0.1 Score=48.35 Aligned_cols=42 Identities=14% Similarity=0.029 Sum_probs=33.8
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
+++.+||+.|||. |.++..+|+. |. .|.++|.|..-+..++.
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 3567999999875 8888888875 88 79999999887766543
No 357
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.16 E-value=0.051 Score=49.27 Aligned_cols=41 Identities=20% Similarity=0.129 Sum_probs=33.4
Q ss_pred CCCeEEEec--ccCcHHHHHHHH-cCCeEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPG--AGLGRLAFEIAR-RGYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpG--cG~Grla~ela~-~G~~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.| .|.|..+..+++ .|++|.+++-+..-+..++.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 567999999 578888888876 49999999999887665543
No 358
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.09 E-value=0.14 Score=48.65 Aligned_cols=42 Identities=24% Similarity=0.174 Sum_probs=34.2
Q ss_pred CCCCeEEEecc--cCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGA--GLGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|| |.|.++..+|+. |..|.+++-|..-+..++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 45789999997 678999998875 9999999999887766543
No 359
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.09 E-value=0.095 Score=48.55 Aligned_cols=42 Identities=14% Similarity=-0.006 Sum_probs=33.7
Q ss_pred CCCCeEEEeccc-CcHHHHHHHHc-CC-eEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAG-LGRLAFEIARR-GY-VCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG-~Grla~ela~~-G~-~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.||| .|.++..+|+. |. .|.++|.|..-+..++.
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 356799999987 48888888875 88 79999999887766543
No 360
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.03 E-value=0.1 Score=47.86 Aligned_cols=37 Identities=22% Similarity=0.125 Sum_probs=30.5
Q ss_pred CeEEEecc--cCcHHHHHHHH-cCC-eEEEeeCCHHHHHHH
Q psy3185 121 VNILVPGA--GLGRLAFEIAR-RGY-VCQGNEFSLFMLFAS 157 (298)
Q Consensus 121 ~~VLdpGc--G~Grla~ela~-~G~-~v~g~D~S~~Ml~~a 157 (298)
.+||+.|| |.|..+..+++ .|+ .|.+++.+..-+..+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~ 202 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILL 202 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH
Confidence 79999997 78888888876 599 999999998755544
No 361
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.97 E-value=0.1 Score=48.01 Aligned_cols=39 Identities=18% Similarity=0.094 Sum_probs=31.2
Q ss_pred CCCeEEEeccc-CcHHHHHHHHc-CCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAG-LGRLAFEIARR-GYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG-~Grla~ela~~-G~~v~g~D~S~~Ml~~a 157 (298)
++.+||+.|+| .|.++..+|+. |..|.+++-|..-+..+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~ 220 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEA 220 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence 46799999987 47788888875 99999999998755543
No 362
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.97 E-value=0.14 Score=47.30 Aligned_cols=39 Identities=21% Similarity=0.100 Sum_probs=30.7
Q ss_pred CCCeEEEecccC-cHHHHHHHHc-CCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIARR-GYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela~~-G~~v~g~D~S~~Ml~~a 157 (298)
++.+||+.|+|. |.++..+|+. |+.|.+++-|..-+..+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 227 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEA 227 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 467999999864 7777888764 99999999998765543
No 363
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.91 E-value=0.094 Score=50.11 Aligned_cols=42 Identities=26% Similarity=0.097 Sum_probs=34.4
Q ss_pred CCCCeEEEecc--cCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGA--GLGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|| |.|.++..+|+. |..|.+++-|..=+..++.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA 271 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh
Confidence 45779999997 689999999975 9999999988887666544
No 364
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.90 E-value=0.052 Score=50.88 Aligned_cols=38 Identities=18% Similarity=0.251 Sum_probs=27.3
Q ss_pred CCCeEEEecccCcHHHHHHH----HcCCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGAGLGRLAFEIA----RRGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela----~~G~~v~g~D~S~~Ml~~a~ 158 (298)
.+.+|+++|+ |+.+..+| ..|.+|++.|.+..-+..+.
T Consensus 167 ~g~~V~ViG~--G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~ 208 (377)
T 2vhw_A 167 EPADVVVIGA--GTAGYNAARIANGMGATVTVLDINIDKLRQLD 208 (377)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 4679999998 45444443 34899999999987655443
No 365
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.82 E-value=0.081 Score=49.24 Aligned_cols=41 Identities=27% Similarity=0.190 Sum_probs=33.2
Q ss_pred CCCeEEEeccc-CcHHHHHHHHc-C-CeEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAG-LGRLAFEIARR-G-YVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG-~Grla~ela~~-G-~~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.||| .|.++..+|+. | ..|.+++.|..-+..++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 56799999976 58888888875 8 599999999987766543
No 366
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.78 E-value=0.11 Score=47.52 Aligned_cols=42 Identities=17% Similarity=0.105 Sum_probs=34.8
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc--CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR--GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~--G~~v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|+|. |.++..+|+. |..|.++|.|..-+..++.
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE 214 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 3577999999986 8899999975 6789999999987776654
No 367
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.69 E-value=0.076 Score=49.52 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=26.5
Q ss_pred CCCeEEEecccCcHHHHHHH----HcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLGRLAFEIA----RRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela----~~G~~v~g~D~S~~Ml~~a 157 (298)
.+.+|+++|+| .++..++ ..|++|++.|.+..-+..+
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~ 205 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMGAQVTILDVNHKRLQYL 205 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 35799999984 4444433 4599999999998755443
No 368
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.65 E-value=0.17 Score=46.57 Aligned_cols=39 Identities=21% Similarity=0.093 Sum_probs=30.8
Q ss_pred CeEEEeccc-CcHHH-HHHH-Hc-CCe-EEEeeCCHH---HHHHHHH
Q psy3185 121 VNILVPGAG-LGRLA-FEIA-RR-GYV-CQGNEFSLF---MLFASNF 159 (298)
Q Consensus 121 ~~VLdpGcG-~Grla-~ela-~~-G~~-v~g~D~S~~---Ml~~a~~ 159 (298)
.+||+.|+| .|.++ ..+| +. |.. |.+++-|.. -+..++.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~ 220 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE 220 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH
Confidence 799999986 48888 8888 64 887 999999876 5655543
No 369
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.42 E-value=0.071 Score=49.47 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=29.8
Q ss_pred CCCCeEEEec--ccCcHHHHHHHHc-CCeEEEeeCCHHHHHHH
Q psy3185 118 PKDVNILVPG--AGLGRLAFEIARR-GYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 118 ~~~~~VLdpG--cG~Grla~ela~~-G~~v~g~D~S~~Ml~~a 157 (298)
.++.+||+.| .|.|.++..+|+. |..|.+++ |..-+..+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~ 223 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV 223 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH
Confidence 3577999999 4679999999875 89999998 65544433
No 370
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.33 E-value=0.23 Score=45.73 Aligned_cols=39 Identities=21% Similarity=0.118 Sum_probs=29.8
Q ss_pred CCeEEEeccc-CcHHHHHHHHc-CCeEEEeeCCH---HHHHHHH
Q psy3185 120 DVNILVPGAG-LGRLAFEIARR-GYVCQGNEFSL---FMLFASN 158 (298)
Q Consensus 120 ~~~VLdpGcG-~Grla~ela~~-G~~v~g~D~S~---~Ml~~a~ 158 (298)
+.+||+.|+| .|.++..+|+. |+.|.+++-|. .-+..++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 224 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE 224 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHH
Confidence 6799999985 37777777764 99999999987 5554443
No 371
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.29 E-value=0.13 Score=47.21 Aligned_cols=41 Identities=20% Similarity=0.204 Sum_probs=33.1
Q ss_pred CCCCeEEEecc--cCcHHHHHHHH-cCCeEEEeeCCHHHHHHHH
Q psy3185 118 PKDVNILVPGA--GLGRLAFEIAR-RGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 118 ~~~~~VLdpGc--G~Grla~ela~-~G~~v~g~D~S~~Ml~~a~ 158 (298)
.++.+||+.|+ |.|..+..+++ .|+.|.+++.|..-+..++
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 204 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE 204 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 35679999994 78888888876 4999999999998776654
No 372
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.22 E-value=0.058 Score=49.39 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=29.8
Q ss_pred CCCeEEEecccC-cHHHHHHHHc-CC-eEEEeeCCHHHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIARR-GY-VCQGNEFSLFMLF 155 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela~~-G~-~v~g~D~S~~Ml~ 155 (298)
++.+||+.|+|. |.++..+|+. |. .|++++.|..-+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~ 203 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLA 203 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 467999999864 8888888874 98 8999999986443
No 373
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.19 E-value=0.43 Score=47.77 Aligned_cols=146 Identities=14% Similarity=0.178 Sum_probs=81.3
Q ss_pred CCCeEEEecccCcHHHHHHHHc------------C--CeEEEeeC---CHHHHHHHHHHHhhhhhccccccccccccccc
Q psy3185 119 KDVNILVPGAGLGRLAFEIARR------------G--YVCQGNEF---SLFMLFASNFILNKCREKNVYKIYPWVQQTDN 181 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~------------G--~~v~g~D~---S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~ 181 (298)
+..+||+.|-|||..+....+. + -+++++|. +...+..+- +.-. .+-++......
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~---~~~~-----~~~~~~~~l~~ 137 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAH---QHWP-----ELAPWAEQLQA 137 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHH---TTCG-----GGHHHHHHHHH
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHH---HhCh-----hhHHHHHHHHH
Confidence 4579999999999976655332 2 24889999 877776332 1100 00011100000
Q ss_pred cccccccccccccCCCCCCCCC-CCCCeeEEeccccccccC-----CCceeEEEec-ccccCcchH--HHHHHHHHHhcc
Q psy3185 182 NILTHHQTMAVTFPDINTSDYN-DDCDFSMAAGDFLQVYVH-----PNKWDCVATC-FFIDCANNI--VSFIETIFNILK 252 (298)
Q Consensus 182 ~~~~~~~~r~~~ipd~~~~~~~-~~~~~~~~~gDf~~~~~~-----~~~fD~V~t~-ffidta~n~--~~yl~~I~~~Lk 252 (298)
+ . +..+|.+.-..+. ....+.+..||..+.... .+.||+|+-= |.=...+++ .+++..|++++|
T Consensus 138 ~------~-~~~~~~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~ 210 (676)
T 3ps9_A 138 Q------W-PMPLPGCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLAR 210 (676)
T ss_dssp H------C-CCCCSEEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEE
T ss_pred h------C-cccCCCceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhC
Confidence 0 0 0001111000000 113577889998776542 3678887432 211111222 478999999999
Q ss_pred CCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 253 PGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 253 pGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
|||.+... .. ...+++.+.++||.+.+
T Consensus 211 ~g~~~~t~-----~~------------~~~vr~~L~~aGf~v~~ 237 (676)
T 3ps9_A 211 PGGTLATF-----TS------------AGFVRRGLQDAGFTMQK 237 (676)
T ss_dssp EEEEEEES-----CC------------CHHHHHHHHHHTCEEEE
T ss_pred CCCEEEec-----cC------------cHHHHHHHHhCCeEEEe
Confidence 99998742 11 25788999999998865
No 374
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.00 E-value=0.089 Score=47.68 Aligned_cols=37 Identities=27% Similarity=0.362 Sum_probs=30.9
Q ss_pred eEEEecc--cCcHHHHHHHHc-CCeEEEeeCCHHHHHHHH
Q psy3185 122 NILVPGA--GLGRLAFEIARR-GYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 122 ~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~~Ml~~a~ 158 (298)
+||+.|| |.|.++..+|+. |+.|.+++-|..-+..++
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~ 191 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR 191 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 7999997 789999999875 999999999876655544
No 375
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.99 E-value=0.69 Score=40.14 Aligned_cols=41 Identities=15% Similarity=0.007 Sum_probs=30.9
Q ss_pred CCCeEEEeccc----CcH-HHHHHHHcCCeEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAG----LGR-LAFEIARRGYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG----~Gr-la~ela~~G~~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+-|++ .|+ ++..|+++|++|..++-+.........
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 51 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHE 51 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHH
Confidence 45689999965 565 788889999999999888655444433
No 376
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.98 E-value=0.24 Score=45.27 Aligned_cols=86 Identities=23% Similarity=0.367 Sum_probs=54.6
Q ss_pred CCeeEEeccccccc--cCCCceeEEEec--ccccC------------cchHHHHHHHHHHhccCCeEEE-Eecccccccc
Q psy3185 206 CDFSMAAGDFLQVY--VHPNKWDCVATC--FFIDC------------ANNIVSFIETIFNILKPGGIWI-NLGPLLYHYS 268 (298)
Q Consensus 206 ~~~~~~~gDf~~~~--~~~~~fD~V~t~--ffidt------------a~n~~~yl~~I~~~LkpGG~~I-n~gPl~y~~~ 268 (298)
....+..||..+.. .+++++|+|+|. |.... ...+...++.++++|||||.++ +++.. |..
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~-~~~- 90 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA-YMK- 90 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC-EET-
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE-ecC-
Confidence 35678899987643 246899999986 54321 1246778899999999999865 44431 100
Q ss_pred CCCCCCcc-CCCHHHHHHHHHhCCCEEEE
Q psy3185 269 NMLNEDSI-EPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 269 ~~~~~~~~-~ls~eEl~~~~~~~GF~i~~ 296 (298)
+.+.. ......+..+++..||.+..
T Consensus 91 ---g~~~~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 91 ---GVPARSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp ---TEEEECCHHHHHHHHHHHTTCCEEEE
T ss_pred ---CCcccccchHHHHHHHHHhCCCEEEE
Confidence 00001 12345677788899998753
No 377
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.96 E-value=0.44 Score=40.48 Aligned_cols=36 Identities=22% Similarity=0.150 Sum_probs=25.9
Q ss_pred CCCeEEEecc--cCcH-HHHHHHHcCCeEEEeeCCHHHH
Q psy3185 119 KDVNILVPGA--GLGR-LAFEIARRGYVCQGNEFSLFML 154 (298)
Q Consensus 119 ~~~~VLdpGc--G~Gr-la~ela~~G~~v~g~D~S~~Ml 154 (298)
.+.+||+.|+ |.|+ ++..|+++|++|.+++-+..-+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~ 58 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG 58 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH
Confidence 4679999996 3443 4555667799999999887643
No 378
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.92 E-value=0.18 Score=46.14 Aligned_cols=41 Identities=22% Similarity=0.192 Sum_probs=32.4
Q ss_pred CCCCeEEEecc--cCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGA--GLGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
+++.+||+.|| |.|.++..+|+. |+.|.++ .|..-+..++.
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~ 192 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD 192 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH
Confidence 35779999994 679999999875 9999999 88876655543
No 379
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.86 E-value=0.21 Score=45.18 Aligned_cols=38 Identities=24% Similarity=0.288 Sum_probs=31.0
Q ss_pred eEEEecc--cCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 122 NILVPGA--GLGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 122 ~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
+||+.|| |.|.++..+|+. |++|.+++-|..-+..++.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~ 193 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ 193 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 7999997 789999999875 9999999998765555443
No 380
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.86 E-value=0.19 Score=46.49 Aligned_cols=40 Identities=23% Similarity=0.291 Sum_probs=31.3
Q ss_pred CCCCeEEEecc--cCcHHHHHHHHc-CCeEEEeeCCHHHHHHHH
Q psy3185 118 PKDVNILVPGA--GLGRLAFEIARR-GYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 118 ~~~~~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~~Ml~~a~ 158 (298)
.++.+||+.|+ |.|.++..+|+. |+.|.++- |..-+..++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~ 205 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK 205 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH
Confidence 35779999999 489999999975 99988885 776555444
No 381
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=92.85 E-value=0.39 Score=43.38 Aligned_cols=134 Identities=15% Similarity=-0.006 Sum_probs=81.9
Q ss_pred HHHHHHHHHHhhhccCChHHHhhhhHHHHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 76 KVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 76 ~v~~~l~~~~RdWs~~g~~ER~~~~~~i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~~Ml~ 155 (298)
|..|...-+.|=|.. ...--+...|+++.|... . +..+||.=+|+|.++.|..+.|-.++.+|.++.-+.
T Consensus 58 ktgE~~~GI~rl~~~--~~~~p~~l~~yf~~l~~~-n-------~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~ 127 (283)
T 2oo3_A 58 KTEEYKEGINPVWLD--RENLPSLFLEYISVIKQI-N-------LNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYN 127 (283)
T ss_dssp -CCGGGGTHHHHHHT--GGGSCGGGHHHHHHHHHH-S-------SSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHH
T ss_pred hcHHHHHHHHHHHhc--ccCCcHHHHHHHHHHHHh-c-------CCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHH
Confidence 344444445555652 011122345677877763 2 357899999999999999997777999999998665
Q ss_pred HHHHHHhhhhhccccccccccccccccccccccccccccCCCCCCCCCCCCCeeEEeccccccc----cCCCceeEEEec
Q psy3185 156 ASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVY----VHPNKWDCVATC 231 (298)
Q Consensus 156 ~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~~~~~~~~~~~~~~gDf~~~~----~~~~~fD~V~t~ 231 (298)
.-+. .. ....++.+..+|..... ++..+||+|+
T Consensus 128 ~L~~---Nl--------------------------------------~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVf-- 164 (283)
T 2oo3_A 128 FLLK---LP--------------------------------------HFNKKVYVNHTDGVSKLNALLPPPEKRGLIF-- 164 (283)
T ss_dssp HHTT---SC--------------------------------------CTTSCEEEECSCHHHHHHHHCSCTTSCEEEE--
T ss_pred HHHH---Hh--------------------------------------CcCCcEEEEeCcHHHHHHHhcCCCCCccEEE--
Confidence 4332 00 00135777888854321 2345799885
Q ss_pred ccccCc----chHHHHHHHHHH--hccCCeEEEEecccc
Q psy3185 232 FFIDCA----NNIVSFIETIFN--ILKPGGIWINLGPLL 264 (298)
Q Consensus 232 ffidta----~n~~~yl~~I~~--~LkpGG~~In~gPl~ 264 (298)
||.. ......++.|.+ .+.|+|+.+.==|++
T Consensus 165 --iDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~ 201 (283)
T 2oo3_A 165 --IDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVV 201 (283)
T ss_dssp --ECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEES
T ss_pred --ECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEecc
Confidence 5642 244555666655 455899887544543
No 382
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.72 E-value=0.15 Score=46.67 Aligned_cols=54 Identities=15% Similarity=0.038 Sum_probs=44.2
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHcCCeEEEeeCCH---HHHHHHHHHH
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSL---FMLFASNFIL 161 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~G~~v~g~D~S~---~Ml~~a~~~l 161 (298)
+++.|.+.+. .++..||||=||+|..+.+..+.|....|+|+++ .+...++..+
T Consensus 231 l~~~~i~~~~-----~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl 287 (319)
T 1eg2_A 231 VIERLVRALS-----HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFL 287 (319)
T ss_dssp HHHHHHHHHS-----CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC
T ss_pred HHHHHHHHhC-----CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHH
Confidence 5555555443 2467999999999999999999999999999999 8888777644
No 383
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.70 E-value=0.98 Score=40.38 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=28.4
Q ss_pred CCeEEEecccC--cHHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 120 DVNILVPGAGL--GRLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 120 ~~~VLdpGcG~--Grla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
..+|.++|+|. +.++..|++.|++|++.|.++.-+..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~ 45 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACAN 45 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHH
Confidence 46899998875 23566677789999999999875543
No 384
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.65 E-value=0.85 Score=41.38 Aligned_cols=39 Identities=23% Similarity=0.388 Sum_probs=30.3
Q ss_pred CCeEEEecccC--cHHHHHHHHcCC--eEEEeeCCHHHHHHHH
Q psy3185 120 DVNILVPGAGL--GRLAFEIARRGY--VCQGNEFSLFMLFASN 158 (298)
Q Consensus 120 ~~~VLdpGcG~--Grla~ela~~G~--~v~g~D~S~~Ml~~a~ 158 (298)
..+|.++|+|. |.++..|++.|+ +|++.|.++.-+..+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~ 75 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV 75 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 36899999885 346677778899 9999999997665443
No 385
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.56 E-value=0.078 Score=50.02 Aligned_cols=40 Identities=25% Similarity=0.267 Sum_probs=29.3
Q ss_pred CCCeEEEecccC-cHHHHHHHH-cCCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIAR-RGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela~-~G~~v~g~D~S~~Ml~~a~ 158 (298)
++.+|+++|+|. |..+..+++ .|.+|++.|.++.-+..+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 224 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVR 224 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 467999999983 445555444 4999999999987665444
No 386
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.45 E-value=0.93 Score=37.09 Aligned_cols=38 Identities=24% Similarity=0.261 Sum_probs=27.1
Q ss_pred CCCeEEEecccC-cH-HHHHHHHc-CCeEEEeeCCHHHHHH
Q psy3185 119 KDVNILVPGAGL-GR-LAFEIARR-GYVCQGNEFSLFMLFA 156 (298)
Q Consensus 119 ~~~~VLdpGcG~-Gr-la~ela~~-G~~v~g~D~S~~Ml~~ 156 (298)
.+.+|+++|||. |+ ++..|.+. |+.|+++|.++.-+..
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~ 78 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQ 78 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHH
Confidence 356899998763 32 34445567 9999999999976543
No 387
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.15 E-value=0.65 Score=41.39 Aligned_cols=40 Identities=13% Similarity=0.055 Sum_probs=30.4
Q ss_pred CCCeEEEecc----cCcH-HHHHHHHcCCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGA----GLGR-LAFEIARRGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGc----G~Gr-la~ela~~G~~v~g~D~S~~Ml~~a~ 158 (298)
++.+||+-|+ |.|+ ++..|++.|+.|..++-+..-.....
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~ 73 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVD 73 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence 3568999997 5665 77888889999999999865444333
No 388
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=92.12 E-value=0.65 Score=38.80 Aligned_cols=32 Identities=28% Similarity=0.194 Sum_probs=23.0
Q ss_pred eEEEecc--cCcH-HHHHHHHcCCeEEEeeCCHHH
Q psy3185 122 NILVPGA--GLGR-LAFEIARRGYVCQGNEFSLFM 153 (298)
Q Consensus 122 ~VLdpGc--G~Gr-la~ela~~G~~v~g~D~S~~M 153 (298)
+||+.|+ |+|+ ++..|+++|++|.+++-+..-
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 36 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQK 36 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 6999996 2333 444556679999999988753
No 389
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.11 E-value=0.079 Score=50.17 Aligned_cols=39 Identities=21% Similarity=0.208 Sum_probs=28.9
Q ss_pred CCCeEEEecccC-cHHHHHHHH-cCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIAR-RGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela~-~G~~v~g~D~S~~Ml~~a 157 (298)
++.+|+++|+|. |..+..+++ .|..|++.|.+..-+..+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 367999999974 555555554 499999999998765544
No 390
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.06 E-value=1.1 Score=39.11 Aligned_cols=35 Identities=31% Similarity=0.235 Sum_probs=27.0
Q ss_pred eEEEecccC--cHHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 122 NILVPGAGL--GRLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 122 ~VLdpGcG~--Grla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
+|.++|||. +.++..|++.|++|++.|.++.-+..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~ 38 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEK 38 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 689999875 33556677789999999999876543
No 391
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.94 E-value=0.4 Score=44.18 Aligned_cols=41 Identities=22% Similarity=0.208 Sum_probs=33.4
Q ss_pred CCCeEEEec--ccCcHHHHHHHHc--CCeEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPG--AGLGRLAFEIARR--GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpG--cG~Grla~ela~~--G~~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.| .|.|.++..+|+. |..|.+++-+..-+..++.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 467899998 3569999999985 7899999999887666543
No 392
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.83 E-value=0.52 Score=36.84 Aligned_cols=38 Identities=18% Similarity=0.079 Sum_probs=27.1
Q ss_pred CCeEEEecccC-cH-HHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 120 DVNILVPGAGL-GR-LAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 120 ~~~VLdpGcG~-Gr-la~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
..+|++.|||. |+ ++..|++.|++|+++|.++.-+...
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~ 45 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELL 45 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence 35899999853 22 4445556799999999998865443
No 393
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.80 E-value=0.09 Score=50.01 Aligned_cols=40 Identities=28% Similarity=0.282 Sum_probs=29.6
Q ss_pred CCCeEEEecccC-cHHHHHHHH-cCCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIAR-RGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela~-~G~~v~g~D~S~~Ml~~a~ 158 (298)
++.+|+++|+|. |..+..+++ .|.+|++.|.++.-+..+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 230 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVA 230 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 467999999983 555555544 4999999999987665544
No 394
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.59 E-value=2.5 Score=37.46 Aligned_cols=40 Identities=10% Similarity=-0.070 Sum_probs=30.0
Q ss_pred CCCeEEEeccc----CcH-HHHHHHHcCCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGAG----LGR-LAFEIARRGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGcG----~Gr-la~ela~~G~~v~g~D~S~~Ml~~a~ 158 (298)
++.+||+-|++ .|+ ++..|++.|+.|..++-+..-.....
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 74 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVE 74 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 35689999965 554 77788899999999998865444333
No 395
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.48 E-value=1.6 Score=39.37 Aligned_cols=36 Identities=22% Similarity=0.176 Sum_probs=28.6
Q ss_pred CCeEEEecccC-cH-HHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 120 DVNILVPGAGL-GR-LAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 120 ~~~VLdpGcG~-Gr-la~ela~~G~~v~g~D~S~~Ml~ 155 (298)
..+|.++|+|. |. ++..|++.|++|++.|.++.-+.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~ 68 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAA 68 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHH
Confidence 46899999984 33 66677888999999999987443
No 396
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.24 E-value=0.41 Score=43.13 Aligned_cols=40 Identities=20% Similarity=0.245 Sum_probs=29.7
Q ss_pred CCCCeEEEec--ccCcHHHHHHHHc-CCeEEEeeCCHHHHHHHH
Q psy3185 118 PKDVNILVPG--AGLGRLAFEIARR-GYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 118 ~~~~~VLdpG--cG~Grla~ela~~-G~~v~g~D~S~~Ml~~a~ 158 (298)
.++.+||+.| .|.|.++..+|+. |..|.+++ |..-+..++
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~ 193 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK 193 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHH
Confidence 3578999997 4579999999875 99999987 444344443
No 397
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.20 E-value=0.23 Score=46.12 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=27.9
Q ss_pred CCeEEEeccc-CcHHHHHHH-HcCCeEEEeeCCHHHHHHHH
Q psy3185 120 DVNILVPGAG-LGRLAFEIA-RRGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 120 ~~~VLdpGcG-~Grla~ela-~~G~~v~g~D~S~~Ml~~a~ 158 (298)
+.+||++|+| .|+.+..++ ..|.+|++.|-++.-+..+.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~ 207 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLE 207 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 4799999985 344444444 45999999999987665544
No 398
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.19 E-value=0.12 Score=48.43 Aligned_cols=39 Identities=23% Similarity=0.245 Sum_probs=28.3
Q ss_pred CCCeEEEecccC-cHHHHHHHH-cCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIAR-RGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela~-~G~~v~g~D~S~~Ml~~a 157 (298)
++.+|+++|+|. |+.+..+++ .|..|++.|.+..-+..+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 467999999974 444555554 489999999997655443
No 399
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.17 E-value=0.42 Score=43.63 Aligned_cols=41 Identities=20% Similarity=0.198 Sum_probs=32.6
Q ss_pred CCCeEEEec-c-cCcHHHHHHHHc-CCeEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPG-A-GLGRLAFEIARR-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpG-c-G~Grla~ela~~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.| + |.|.++..+|+. |+.|.+++-+..-+..++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 193 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK 193 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 467999994 4 568888888875 9999999999886666554
No 400
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=91.14 E-value=0.42 Score=43.35 Aligned_cols=42 Identities=26% Similarity=0.270 Sum_probs=31.9
Q ss_pred CCCCeEEEecccC-cHHHHHHHHc-CCe-EEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGL-GRLAFEIARR-GYV-CQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~-Grla~ela~~-G~~-v~g~D~S~~Ml~~a~~ 159 (298)
.++.+||+.|||. |.++..+|+. |.. +.++|.|..-+..++.
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~ 203 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS 203 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH
Confidence 3577999999974 6677777765 776 6899999987766654
No 401
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.12 E-value=1 Score=43.87 Aligned_cols=37 Identities=16% Similarity=0.186 Sum_probs=26.7
Q ss_pred CCCeEEEecccCcHHHHHHHH----cCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLGRLAFEIAR----RGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~----~G~~v~g~D~S~~Ml~~a 157 (298)
.+.+|+++|+| .++..+|+ .|..|.++|.++.-+..+
T Consensus 273 ~GktV~IiG~G--~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A 313 (494)
T 3ce6_A 273 GGKKVLICGYG--DVGKGCAEAMKGQGARVSVTEIDPINALQA 313 (494)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CcCEEEEEccC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 47799999985 44444433 489999999998765443
No 402
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.08 E-value=0.98 Score=40.35 Aligned_cols=36 Identities=11% Similarity=0.066 Sum_probs=28.2
Q ss_pred CCeEEEecccC-c-HHHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 120 DVNILVPGAGL-G-RLAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 120 ~~~VLdpGcG~-G-rla~ela~~G~~v~g~D~S~~Ml~ 155 (298)
..+|-++|+|. | .++..|++.|++|++.|.++.-+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~ 52 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMT 52 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 35899999885 3 366677788999999999987544
No 403
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.89 E-value=0.82 Score=41.39 Aligned_cols=41 Identities=20% Similarity=0.045 Sum_probs=30.9
Q ss_pred CCCeEEEecccCc-HHHHHHHH-c-CCeEEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAGLG-RLAFEIAR-R-GYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG~G-rla~ela~-~-G~~v~g~D~S~~Ml~~a~~ 159 (298)
++.+||+.|+|.+ .++..+|+ . |..|.++|.|..-+..++.
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh
Confidence 5779999999864 56666665 3 7889999999986665543
No 404
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.64 E-value=4 Score=35.13 Aligned_cols=39 Identities=23% Similarity=0.171 Sum_probs=30.6
Q ss_pred CCCeEEEecc-c--CcH-HHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGA-G--LGR-LAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGc-G--~Gr-la~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
++.+||+-|+ | .|+ ++..|+++|+.|..++-+..-+...
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 63 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGET 63 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHH
Confidence 4568999997 5 565 7778889999999999998765443
No 405
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.60 E-value=2.7 Score=37.96 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=25.0
Q ss_pred CeEEEecccC-c-HHHHHHHHcC-CeEEEeeCCH
Q psy3185 121 VNILVPGAGL-G-RLAFEIARRG-YVCQGNEFSL 151 (298)
Q Consensus 121 ~~VLdpGcG~-G-rla~ela~~G-~~v~g~D~S~ 151 (298)
.+|-++|+|. | .++..|++.| ++|++.|.++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 5899999884 3 3566677889 9999999997
No 406
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=90.42 E-value=2.1 Score=37.99 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=28.9
Q ss_pred CeEEEecccC--cHHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 121 VNILVPGAGL--GRLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 121 ~~VLdpGcG~--Grla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
.+|.++|||. +.++..|++.|++|++.|.++.-+..
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~ 41 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDG 41 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHH
Confidence 5899999986 23667788889999999999875543
No 407
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.42 E-value=1.2 Score=42.05 Aligned_cols=37 Identities=11% Similarity=0.105 Sum_probs=28.4
Q ss_pred CCeEEEecccCcHHHHHHH----HcCCeEEEeeCCHHHHHHHH
Q psy3185 120 DVNILVPGAGLGRLAFEIA----RRGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela----~~G~~v~g~D~S~~Ml~~a~ 158 (298)
+.+|+++|+ ||++..+| ..|+.|+++|.++..+..++
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~ 44 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR 44 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 568999987 55555554 46999999999999876554
No 408
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.32 E-value=2.1 Score=37.72 Aligned_cols=36 Identities=25% Similarity=0.257 Sum_probs=28.3
Q ss_pred CeEEEecccC-c-HHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 121 VNILVPGAGL-G-RLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 121 ~~VLdpGcG~-G-rla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
.+|.++|+|. | .++..|++.|++|+..|-++.-+..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~ 41 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEA 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHH
Confidence 5899999985 3 3566678889999999999875544
No 409
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.12 E-value=2.4 Score=36.99 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=26.5
Q ss_pred eEEEecccC-cH-HHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 122 NILVPGAGL-GR-LAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 122 ~VLdpGcG~-Gr-la~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
+|.++|||. |. ++..|++ |++|+..|.+..-+..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~ 38 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALR 38 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHH
Confidence 689999986 43 5667788 9999999998775443
No 410
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.07 E-value=2.1 Score=37.74 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=28.2
Q ss_pred CeEEEecccC-c-HHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 121 VNILVPGAGL-G-RLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 121 ~~VLdpGcG~-G-rla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
.+|.++|||. | .++..|++.|++|.+.|.++.-+..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~ 43 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIAD 43 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence 5899999985 3 3566677889999999999875543
No 411
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=89.84 E-value=5.3 Score=35.41 Aligned_cols=39 Identities=26% Similarity=0.204 Sum_probs=30.0
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
.+.+||+-|++.| .++..|+++|+.|..++-+..-+...
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 71 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQA 71 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 3568999998754 36667778899999999998766543
No 412
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.81 E-value=6.6 Score=33.38 Aligned_cols=39 Identities=23% Similarity=0.177 Sum_probs=29.9
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
++.+||+-|++.| .++..|+++|++|..++-+..-+...
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 49 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAV 49 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 4568999997654 36667777899999999998766543
No 413
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.74 E-value=2.8 Score=36.64 Aligned_cols=36 Identities=25% Similarity=0.482 Sum_probs=27.1
Q ss_pred eEEEecccC--cHHHHHHHHcCC--eEEEeeCCHHHHHHH
Q psy3185 122 NILVPGAGL--GRLAFEIARRGY--VCQGNEFSLFMLFAS 157 (298)
Q Consensus 122 ~VLdpGcG~--Grla~ela~~G~--~v~g~D~S~~Ml~~a 157 (298)
+|.++|+|. +.++..|++.|+ +|++.|.+..-+..+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~ 42 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA 42 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHH
Confidence 789999875 335566677798 899999998765543
No 414
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=89.50 E-value=0.91 Score=41.07 Aligned_cols=42 Identities=12% Similarity=0.045 Sum_probs=36.1
Q ss_pred CCCCeEEEecccCcHHHHHHHHcCCeE---EEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGLGRLAFEIARRGYVC---QGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~Grla~ela~~G~~v---~g~D~S~~Ml~~a~~ 159 (298)
+.+.+|||+=||.|.+...+.+.|+++ .++|++.......+.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~ 58 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMV 58 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHH
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHH
Confidence 457899999999999999999999975 899999987766543
No 415
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.48 E-value=3.2 Score=35.93 Aligned_cols=31 Identities=23% Similarity=0.215 Sum_probs=24.3
Q ss_pred CCeEEEecccCcHHHHHHHH----cCCeEEEeeCCHH
Q psy3185 120 DVNILVPGAGLGRLAFEIAR----RGYVCQGNEFSLF 152 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela~----~G~~v~g~D~S~~ 152 (298)
..+||+.|| |.++..|++ +|++|++++-+..
T Consensus 5 ~~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred cCcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 358999995 777766654 5999999988764
No 416
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.26 E-value=3.8 Score=35.63 Aligned_cols=32 Identities=28% Similarity=0.337 Sum_probs=25.2
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeCC
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEFS 150 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S 150 (298)
++.+||+-|++.| + ++..|+++|++|..+|.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 4568999998544 3 666778889999999886
No 417
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=89.19 E-value=2.8 Score=36.43 Aligned_cols=42 Identities=7% Similarity=-0.111 Sum_probs=33.1
Q ss_pred CCCeEEEecc----cCcH-HHHHHHHcCCeEEEeeCCHHHHHHHHHH
Q psy3185 119 KDVNILVPGA----GLGR-LAFEIARRGYVCQGNEFSLFMLFASNFI 160 (298)
Q Consensus 119 ~~~~VLdpGc----G~Gr-la~ela~~G~~v~g~D~S~~Ml~~a~~~ 160 (298)
++..+|+-|+ |.|+ +|..||+.|++|..++-+..-+......
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~ 51 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKL 51 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 4678999995 5666 6778899999999999998777655543
No 418
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=88.91 E-value=4.1 Score=34.65 Aligned_cols=40 Identities=18% Similarity=0.032 Sum_probs=30.6
Q ss_pred CCCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 118 PKDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 118 ~~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
.++.+||+-|++.| .++..|+++|+.|..++-+..-+...
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 54 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSL 54 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 45778999998654 26667778899999999998765543
No 419
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.90 E-value=8.8 Score=32.42 Aligned_cols=39 Identities=26% Similarity=0.247 Sum_probs=29.6
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
++.+||+-|++.| .++..|+++|++|.+++-+..-+...
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~ 45 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKF 45 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3568999997654 26667778899999999998766543
No 420
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.62 E-value=3.7 Score=32.42 Aligned_cols=29 Identities=21% Similarity=0.133 Sum_probs=22.5
Q ss_pred CCeEEEecccCcHHHHHHH----HcCCeEEEeeCC
Q psy3185 120 DVNILVPGAGLGRLAFEIA----RRGYVCQGNEFS 150 (298)
Q Consensus 120 ~~~VLdpGcG~Grla~ela----~~G~~v~g~D~S 150 (298)
+.+|+++|+ |+.+..++ +.|+.|+.+|.+
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECC
Confidence 458999986 66666655 459999999997
No 421
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=88.58 E-value=5.3 Score=35.32 Aligned_cols=164 Identities=12% Similarity=0.009 Sum_probs=88.5
Q ss_pred cchHHHHHHHHHHHhhhccCChHHHhhhhH---------HHHH--HHHhhCCCCCCCCCCCeEEEecccCcHHHHHHHHc
Q psy3185 72 TDLEKVQTTLKQFVRDWSEEGSEERKTCYE---------PIIS--EILARFPPETINPKDVNILVPGAGLGRLAFEIARR 140 (298)
Q Consensus 72 ~~~~~v~~~l~~~~RdWs~~g~~ER~~~~~---------~i~~--~l~~~~p~~~~~~~~~~VLdpGcG~Grla~ela~~ 140 (298)
.+-...++.|.+++++++... .|+...+. .++. +|-+... .-++.|++.||-.|.-+..+|..
T Consensus 17 ~~~~~~~~~l~~~~~~~~~~~-~e~l~~~~~~~~~~~l~~~l~~~~l~~~i~-----~vpG~ivE~GV~rG~S~~~~a~~ 90 (257)
T 3tos_A 17 PEETETTQRLTKLLTNSPIPT-EELVNNLPLFLRRHQMTDLLSMDALYRQVL-----DVPGVIMEFGVRFGRHLGTFAAL 90 (257)
T ss_dssp HHHHHHHHHHHHHHHTCCSCG-GGGGGCGGGGCCHHHHHHHHHHHHHHHHTT-----TSCSEEEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCh-HHHHHhHHhhhhHHHHHHHHHHHHHHHHhh-----CCCCeEEEEecccCHHHHHHHHH
Confidence 444567888999999998733 33332222 2222 3333322 12569999999999988887752
Q ss_pred -------C--CeEEEeeCCHHHHHHHHHHHhhhhhcccccccccccccccccccccccccc--------ccCCCCCCCCC
Q psy3185 141 -------G--YVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAV--------TFPDINTSDYN 203 (298)
Q Consensus 141 -------G--~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~--------~ipd~~~~~~~ 203 (298)
+ -.|.|.|-=..|-..... ...... -....++..-...+.++.+ .+|.+
T Consensus 91 ~~~l~~~~~~r~v~~fDTFeG~P~~~~~------D~~~~~--~~~G~~~~~~~~~~~l~~~l~~~~~~~~~g~~------ 156 (257)
T 3tos_A 91 RGVYEPYNPLRRIVGFDTFTGFPDVNDV------DRVGPT--AYQGRFAVPGGYPAYLKEVLDAHECSDFFGHV------ 156 (257)
T ss_dssp HHHHCTTCTTCCEEEEECSSCCCSCCGG------GTTSTT--CSTTTTCCCTTHHHHHHHHHHHHHTTSTTTTS------
T ss_pred HHHhcccCCCCEEEEEECCCCCCCCccc------cccccc--cccCcccccchhHHHHHHHHHHHhhhhhcCCC------
Confidence 2 459999843333211000 000000 0000111000000111110 12211
Q ss_pred CCCCeeEEecccccccc------CCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEE
Q psy3185 204 DDCDFSMAAGDFLQVYV------HPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWI 258 (298)
Q Consensus 204 ~~~~~~~~~gDf~~~~~------~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~I 258 (298)
..++.++.|+|.+..+ +.+++|.|.-=. |.-.+-..|++.+...|+|||++|
T Consensus 157 -~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~--D~Y~~t~~~le~~~p~l~~GGvIv 214 (257)
T 3tos_A 157 -TQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL--DLYEPTKAVLEAIRPYLTKGSIVA 214 (257)
T ss_dssp -CCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC--CCHHHHHHHHHHHGGGEEEEEEEE
T ss_pred -CCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC--cccchHHHHHHHHHHHhCCCcEEE
Confidence 1589999999987642 234677664221 344566789999999999999998
No 422
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=88.48 E-value=7.7 Score=33.29 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=28.2
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~ 155 (298)
++.+||+-|++.| .++..|+++|++|..++-+..-+.
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 46 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERAR 46 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3568999997544 366677788999999999876544
No 423
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=88.37 E-value=2.1 Score=37.81 Aligned_cols=35 Identities=14% Similarity=0.003 Sum_probs=26.9
Q ss_pred CeEEEecccC--cHHHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 121 VNILVPGAGL--GRLAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 121 ~~VLdpGcG~--Grla~ela~~G~~v~g~D~S~~Ml~ 155 (298)
.+|.++|+|. +.++..|++.|++|++.|.++.-+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~ 38 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAE 38 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHH
Confidence 4789999875 2356667778999999999987544
No 424
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.23 E-value=2.9 Score=39.94 Aligned_cols=40 Identities=25% Similarity=0.126 Sum_probs=33.0
Q ss_pred CCeEEEecccC--cHHHHHHHHcCCeEEEeeCCHHHHHHHHH
Q psy3185 120 DVNILVPGAGL--GRLAFEIARRGYVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 120 ~~~VLdpGcG~--Grla~ela~~G~~v~g~D~S~~Ml~~a~~ 159 (298)
-.+|.++|+|+ +.+|..+++.|++|++.|.+...+..++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~ 78 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKK 78 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 35799999997 44788888999999999999987766543
No 425
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.16 E-value=2.8 Score=37.28 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=25.3
Q ss_pred CCCCeEEEecccCcHHHHHHHH----cCCeEEEeeCCHHH
Q psy3185 118 PKDVNILVPGAGLGRLAFEIAR----RGYVCQGNEFSLFM 153 (298)
Q Consensus 118 ~~~~~VLdpGcG~Grla~ela~----~G~~v~g~D~S~~M 153 (298)
-.+.+|+++|+| +++..+|+ .|.+|++.|.+..-
T Consensus 153 l~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~dr~~~~ 190 (293)
T 3d4o_A 153 IHGANVAVLGLG--RVGMSVARKFAALGAKVKVGARESDL 190 (293)
T ss_dssp STTCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCCEEEEEeeC--HHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 356799999975 55555444 48999999999864
No 426
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.07 E-value=6.7 Score=33.53 Aligned_cols=39 Identities=15% Similarity=-0.032 Sum_probs=28.5
Q ss_pred CCCCeEEEeccc----CcH-HHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 118 PKDVNILVPGAG----LGR-LAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 118 ~~~~~VLdpGcG----~Gr-la~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
.++.+||+-|++ .|+ ++..|+++|+.|..++-+..-...
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~ 55 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR 55 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH
Confidence 457799999964 554 566777889999999888544333
No 427
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=88.00 E-value=8.1 Score=33.79 Aligned_cols=37 Identities=22% Similarity=0.160 Sum_probs=29.0
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~ 155 (298)
++.+||+-|++.| .++..|++.|++|..++-+..-+.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~ 67 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAAD 67 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3568999998655 267778888999999999887544
No 428
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.88 E-value=3.5 Score=39.64 Aligned_cols=37 Identities=30% Similarity=0.254 Sum_probs=29.3
Q ss_pred CCeEEEecccC-c-HHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 120 DVNILVPGAGL-G-RLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 120 ~~~VLdpGcG~-G-rla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
+.+|-++|+|. | .++..|++.|++|++.|-++.-+..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~ 53 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEE 53 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 56899999985 2 3677788889999999999875543
No 429
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=87.57 E-value=3 Score=37.23 Aligned_cols=34 Identities=26% Similarity=0.210 Sum_probs=25.4
Q ss_pred CCCCeEEEecccCcHHHHHHHH----cCCeEEEeeCCHHH
Q psy3185 118 PKDVNILVPGAGLGRLAFEIAR----RGYVCQGNEFSLFM 153 (298)
Q Consensus 118 ~~~~~VLdpGcG~Grla~ela~----~G~~v~g~D~S~~M 153 (298)
-.+.+|+++|+| +.+..+|+ .|.+|++.|.+..-
T Consensus 155 l~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~d~~~~~ 192 (300)
T 2rir_A 155 IHGSQVAVLGLG--RTGMTIARTFAALGANVKVGARSSAH 192 (300)
T ss_dssp STTSEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCCEEEEEccc--HHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 357799999974 55555543 58999999999863
No 430
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=87.47 E-value=6.2 Score=33.80 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=23.9
Q ss_pred CCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCH
Q psy3185 120 DVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSL 151 (298)
Q Consensus 120 ~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~ 151 (298)
..+||+-|++.| + ++..|+++|++|..++-+.
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSD 41 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 468999998654 2 6677788899999886543
No 431
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.38 E-value=11 Score=32.50 Aligned_cols=39 Identities=23% Similarity=0.154 Sum_probs=29.2
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
.+.+||+-|++.| .++..|+++|++|..++-+..-+...
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 50 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDAC 50 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4568999997644 25666777899999999998765543
No 432
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=87.32 E-value=5.2 Score=34.45 Aligned_cols=36 Identities=22% Similarity=0.165 Sum_probs=26.9
Q ss_pred CCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 120 DVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 120 ~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~ 155 (298)
+.+||+-|++.| .++..|+++|++|.+++-+..-+.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGV 45 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 458999997544 256667778999999999876543
No 433
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.28 E-value=4.2 Score=39.34 Aligned_cols=120 Identities=14% Similarity=0.161 Sum_probs=67.4
Q ss_pred CCeEEEecccC--cHHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCC
Q psy3185 120 DVNILVPGAGL--GRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDI 197 (298)
Q Consensus 120 ~~~VLdpGcG~--Grla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~ 197 (298)
..+|-++|+|. +.++..|++.|++|++.|.++.-+..... .. ...
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~---~g--~~g---------------------------- 50 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA---NE--AKG---------------------------- 50 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH---TT--TTT----------------------------
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---cc--cCC----------------------------
Confidence 35799998774 23566677789999999999875543322 10 000
Q ss_pred CCCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccC
Q psy3185 198 NTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIE 277 (298)
Q Consensus 198 ~~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ 277 (298)
.++. ...+..++...-..-|+|+.+- -+...+.+.++.+...|+||.++|+.+-..+..
T Consensus 51 --------~~i~-~~~s~~e~v~~l~~aDvVil~V--p~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~---------- 109 (484)
T 4gwg_A 51 --------TKVV-GAQSLKEMVSKLKKPRRIILLV--KAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRD---------- 109 (484)
T ss_dssp --------SSCE-ECSSHHHHHHTBCSSCEEEECS--CSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHH----------
T ss_pred --------Ccee-ccCCHHHHHhhccCCCEEEEec--CChHHHHHHHHHHHHhcCCCCEEEEcCCCCchH----------
Confidence 0000 0111112111112357776654 122345678899999999999999865433321
Q ss_pred CCHHHHHHHHHhCCCEEE
Q psy3185 278 PSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 278 ls~eEl~~~~~~~GF~i~ 295 (298)
..++.+.+.+.|...+
T Consensus 110 --t~~~~~~l~~~Gi~fv 125 (484)
T 4gwg_A 110 --TTRRCRDLKAKGILFV 125 (484)
T ss_dssp --HHHHHHHHHHTTCEEE
T ss_pred --HHHHHHHHHhhccccc
Confidence 2344555666676544
No 434
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=87.24 E-value=3.1 Score=34.59 Aligned_cols=29 Identities=17% Similarity=0.339 Sum_probs=21.8
Q ss_pred eEEEecccCcHHHHHHH----HcCCeEEEeeCCH
Q psy3185 122 NILVPGAGLGRLAFEIA----RRGYVCQGNEFSL 151 (298)
Q Consensus 122 ~VLdpGcG~Grla~ela----~~G~~v~g~D~S~ 151 (298)
+||+.|+ +|.++..++ +.|++|.+++-+.
T Consensus 2 ~ilItGa-tG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGS-TGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEEST-TSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 7999994 566666555 4599999998775
No 435
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.07 E-value=3.4 Score=36.32 Aligned_cols=36 Identities=19% Similarity=0.108 Sum_probs=28.2
Q ss_pred CeEEEecc-cC-c-HHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 121 VNILVPGA-GL-G-RLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 121 ~~VLdpGc-G~-G-rla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
.+|..+|+ |. | .++..|++.|++|++.|-+..-+..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~ 50 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDR 50 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 48999999 74 3 3666778889999999999875543
No 436
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=87.03 E-value=1.2 Score=42.51 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=25.3
Q ss_pred CCCeEEEecccC-cHHHHHHH-HcCCeEEEeeCCHHH
Q psy3185 119 KDVNILVPGAGL-GRLAFEIA-RRGYVCQGNEFSLFM 153 (298)
Q Consensus 119 ~~~~VLdpGcG~-Grla~ela-~~G~~v~g~D~S~~M 153 (298)
.+.+|+++|+|. |+.....+ ..|.+|.+.|.++.-
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~r 255 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPIC 255 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 577999999985 44333333 348999999999863
No 437
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=86.96 E-value=11 Score=32.10 Aligned_cols=38 Identities=21% Similarity=0.100 Sum_probs=29.9
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
++.+||+-|++.| .++..|+++|+.|..++-+..-+..
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~ 48 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAER 48 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 4568999998654 3677788889999999999876543
No 438
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=86.92 E-value=10 Score=32.54 Aligned_cols=39 Identities=21% Similarity=0.099 Sum_probs=28.6
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
++.+||+-|++.| .++..|+++|+.|..++-+..-+...
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 69 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAV 69 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 3568999997544 25556677799999999998765543
No 439
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=86.88 E-value=3.9 Score=35.68 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=28.5
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
.+.+||+-|++.| .++..|+++|+.|.+++-+..-+..+
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~ 52 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEA 52 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3568999998644 25666777899999999998755433
No 440
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=86.86 E-value=1.6 Score=41.98 Aligned_cols=48 Identities=15% Similarity=0.034 Sum_probs=30.1
Q ss_pred HHHHHHhhCCCCCCCCCCCeEEEecccC-cHHHHHHH-HcCCeEEEeeCCHHH
Q psy3185 103 IISEILARFPPETINPKDVNILVPGAGL-GRLAFEIA-RRGYVCQGNEFSLFM 153 (298)
Q Consensus 103 i~~~l~~~~p~~~~~~~~~~VLdpGcG~-Grla~ela-~~G~~v~g~D~S~~M 153 (298)
+++.+.+.... ...+.+|+++|+|. |+.....+ ..|.+|.+.|.++.-
T Consensus 233 lvdgI~Ratg~---~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~ 282 (464)
T 3n58_A 233 LVDGIRRGTDV---MMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPIC 282 (464)
T ss_dssp HHHHHHHHHCC---CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred HHHHHHHhcCC---cccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence 45555543221 23577999999874 44333333 248899999998863
No 441
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=86.84 E-value=0.85 Score=41.69 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=26.6
Q ss_pred CC-CeEEEecc--cCcHHHHHHHHc-CCeEEEeeCCH
Q psy3185 119 KD-VNILVPGA--GLGRLAFEIARR-GYVCQGNEFSL 151 (298)
Q Consensus 119 ~~-~~VLdpGc--G~Grla~ela~~-G~~v~g~D~S~ 151 (298)
++ .+||+.|+ |.|.++..+|+. |..|.++.-+.
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~ 202 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR 202 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCc
Confidence 46 79999996 789999999975 99988776443
No 442
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.78 E-value=14 Score=31.67 Aligned_cols=39 Identities=21% Similarity=0.126 Sum_probs=30.3
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
++.+||+-|++.| + ++..|++.|++|..++-+..-+...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 51 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDV 51 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHH
Confidence 3568999998655 3 6777888899999999998766543
No 443
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=86.70 E-value=10 Score=32.41 Aligned_cols=38 Identities=32% Similarity=0.208 Sum_probs=29.2
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
++.+||+-|++.| .++..|+++|++|..++-+..-+..
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~ 48 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQA 48 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4568999998654 3666777889999999998875543
No 444
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=86.41 E-value=2.8 Score=37.81 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=28.6
Q ss_pred CeEEEecccC-c-HHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 121 VNILVPGAGL-G-RLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 121 ~~VLdpGcG~-G-rla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
.+|.++|||. | .++..|++.|++|+++|-++.-+..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~ 42 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKE 42 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence 5899999986 2 3666778889999999999875543
No 445
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=86.40 E-value=2.9 Score=37.46 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=28.1
Q ss_pred CCeEEEecccC-c-HHHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 120 DVNILVPGAGL-G-RLAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 120 ~~~VLdpGcG~-G-rla~ela~~G~~v~g~D~S~~Ml~ 155 (298)
..+|-++|+|. | .++..|++.|++|++.|.++.-+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~ 58 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCD 58 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 46899999885 2 366667788999999999987544
No 446
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=86.17 E-value=1.4 Score=38.64 Aligned_cols=73 Identities=10% Similarity=0.184 Sum_probs=45.7
Q ss_pred eEEecccccccc--CCCceeEEEec--ccccCc------------chHHHHHHHHHHhccCCeEEEE-eccccccccCCC
Q psy3185 209 SMAAGDFLQVYV--HPNKWDCVATC--FFIDCA------------NNIVSFIETIFNILKPGGIWIN-LGPLLYHYSNML 271 (298)
Q Consensus 209 ~~~~gDf~~~~~--~~~~fD~V~t~--ffidta------------~n~~~yl~~I~~~LkpGG~~In-~gPl~y~~~~~~ 271 (298)
.+..||..+... .++++|+|+|- |..... .-+...++.++++|||||.++. .++ |.
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d--~~----- 78 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP--FN----- 78 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH--HH-----
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc--HH-----
Confidence 366777655432 35789998874 443311 1345678888999999998653 233 11
Q ss_pred CCCccCCCHHHHHHHHHhCCCEEEE
Q psy3185 272 NEDSIEPSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 272 ~~~~~~ls~eEl~~~~~~~GF~i~~ 296 (298)
...+..++...||.+..
T Consensus 79 --------~~~~~~~~~~~gf~~~~ 95 (260)
T 1g60_A 79 --------CAFICQYLVSKGMIFQN 95 (260)
T ss_dssp --------HHHHHHHHHHTTCEEEE
T ss_pred --------HHHHHHHHHhhccceeE
Confidence 23456677788987654
No 447
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=86.17 E-value=13 Score=32.17 Aligned_cols=32 Identities=25% Similarity=0.308 Sum_probs=25.6
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeCC
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEFS 150 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S 150 (298)
.+..||+-|++.| + ++..|++.|+.|..+|.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEecc
Confidence 4568999998654 3 677788889999999886
No 448
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=86.09 E-value=8.5 Score=33.81 Aligned_cols=35 Identities=31% Similarity=0.390 Sum_probs=25.2
Q ss_pred CCCeEEEecccCcHHH----HHHHHcCCeEEEeeCCHHHH
Q psy3185 119 KDVNILVPGAGLGRLA----FEIARRGYVCQGNEFSLFML 154 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla----~ela~~G~~v~g~D~S~~Ml 154 (298)
++.+||+.|+ +|.++ ..|+++|++|.+++-+..-.
T Consensus 10 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 48 (342)
T 1y1p_A 10 EGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKL 48 (342)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccH
Confidence 4578999996 34444 44566799999999887543
No 449
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=86.09 E-value=1.1 Score=42.29 Aligned_cols=42 Identities=12% Similarity=-0.070 Sum_probs=35.3
Q ss_pred CCCCeEEEecccCcHHHHHHH-HcC---CeEEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGLGRLAFEIA-RRG---YVCQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~Grla~ela-~~G---~~v~g~D~S~~Ml~~a~~ 159 (298)
+++..|+|+||+.|..+..++ +.+ ..|.++|.++......+.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~ 270 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQN 270 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHH
Confidence 457799999999999999988 444 479999999998876655
No 450
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=86.08 E-value=9.1 Score=32.65 Aligned_cols=38 Identities=24% Similarity=0.212 Sum_probs=29.0
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
++.+||+-|++.| + ++..|++.|++|..++-+..-+..
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~ 45 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKA 45 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 3568999998654 2 666778889999999999875543
No 451
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.99 E-value=4.3 Score=39.30 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=29.2
Q ss_pred CCeEEEecccC-c-HHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 120 DVNILVPGAGL-G-RLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 120 ~~~VLdpGcG~-G-rla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
..+|-++|+|. | .++..|++.|++|++.|-++.-+..
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~ 48 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDH 48 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 45899999984 3 3677788899999999999875543
No 452
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=85.95 E-value=3.8 Score=39.24 Aligned_cols=36 Identities=22% Similarity=0.217 Sum_probs=28.6
Q ss_pred CeEEEecccC--cHHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 121 VNILVPGAGL--GRLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 121 ~~VLdpGcG~--Grla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
.+|.++|+|. +.++..|++.|++|.+.|-++.-+..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~ 43 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEE 43 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHH
Confidence 5799999885 34667788889999999999876543
No 453
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=85.90 E-value=14 Score=31.61 Aligned_cols=37 Identities=22% Similarity=0.142 Sum_probs=27.5
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~ 155 (298)
++.+||+-|++.| .++..|+++|++|.+++-+..-+.
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~ 47 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN 47 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3568999997544 255667778999999999876543
No 454
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=85.82 E-value=3.2 Score=37.22 Aligned_cols=112 Identities=13% Similarity=0.040 Sum_probs=59.8
Q ss_pred CeEEEecccCc--HHHHHHHHcCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCC
Q psy3185 121 VNILVPGAGLG--RLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDIN 198 (298)
Q Consensus 121 ~~VLdpGcG~G--rla~ela~~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~ 198 (298)
.||=.+|.|.= .++..|++.||+|++.|.|+.-.... ..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l------------------~~--------------------- 46 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPL------------------TK--------------------- 46 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTT------------------TT---------------------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH------------------HH---------------------
Confidence 47889987762 35566777899999999887522110 00
Q ss_pred CCCCCCCCCeeEEeccccccccCCCceeEEEecccccCcchHHH-HHHHHHHhccCCeEEEEeccccccccCCCCCCccC
Q psy3185 199 TSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVS-FIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIE 277 (298)
Q Consensus 199 ~~~~~~~~~~~~~~gDf~~~~~~~~~fD~V~t~ffidta~n~~~-yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ 277 (298)
... -...+..++ -..-|+|++|.- +...+.+ +...+...++||+++|+.+-..+.
T Consensus 47 -------~G~-~~~~s~~e~---~~~~dvvi~~l~--~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~----------- 102 (297)
T 4gbj_A 47 -------LGA-TVVENAIDA---ITPGGIVFSVLA--DDAAVEELFSMELVEKLGKDGVHVSMSTISPE----------- 102 (297)
T ss_dssp -------TTC-EECSSGGGG---CCTTCEEEECCS--SHHHHHHHSCHHHHHHHCTTCEEEECSCCCHH-----------
T ss_pred -------cCC-eEeCCHHHH---HhcCCceeeecc--chhhHHHHHHHHHHhhcCCCeEEEECCCCChH-----------
Confidence 000 011122222 134577877642 2222222 345678889999999975432221
Q ss_pred CCHHHHHHHHHhCCCEEEE
Q psy3185 278 PSYEVVKQVIQGLGFVYEV 296 (298)
Q Consensus 278 ls~eEl~~~~~~~GF~i~~ 296 (298)
+..++.+.+.+.|...++
T Consensus 103 -~~~~~~~~~~~~g~~~ld 120 (297)
T 4gbj_A 103 -TSRQLAQVHEWYGAHYVG 120 (297)
T ss_dssp -HHHHHHHHHHHTTCEEEE
T ss_pred -HHHHHHHHHHhcCCceec
Confidence 146677777777877653
No 455
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=85.60 E-value=17 Score=31.38 Aligned_cols=37 Identities=24% Similarity=0.114 Sum_probs=27.3
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~ 155 (298)
++.+||+-|++.| + ++..|++.|++|..++-+..-+.
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 59 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD 59 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3568999997543 2 55566778999999999876544
No 456
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=85.59 E-value=5 Score=36.04 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=26.5
Q ss_pred eEEEecccC--cHHHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 122 NILVPGAGL--GRLAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 122 ~VLdpGcG~--Grla~ela~~G~~v~g~D~S~~Ml~ 155 (298)
+|=.+|.|. ..++..|++.||.|++.|.++.-..
T Consensus 5 kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~ 40 (300)
T 3obb_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVD 40 (300)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred EEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHH
Confidence 677888776 3366667788999999999987554
No 457
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=85.56 E-value=4.7 Score=42.49 Aligned_cols=42 Identities=17% Similarity=-0.041 Sum_probs=35.7
Q ss_pred CCCCeEEEecccCcHHHHHHHHcCC-e-EEEeeCCHHHHHHHHH
Q psy3185 118 PKDVNILVPGAGLGRLAFEIARRGY-V-CQGNEFSLFMLFASNF 159 (298)
Q Consensus 118 ~~~~~VLdpGcG~Grla~ela~~G~-~-v~g~D~S~~Ml~~a~~ 159 (298)
....+++|+=||.|.++.-|.+.|+ + |.|+|++.......+.
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~ 581 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRL 581 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHH
T ss_pred CCCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHH
Confidence 3567899999999999999999998 4 7799999998776543
No 458
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=85.53 E-value=9.2 Score=33.36 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=28.7
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
++.+||+-|++.| .++..|++.|+.|..++-+..-+..
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 71 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQV 71 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4568999998654 2666777889999999988765543
No 459
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.49 E-value=3.3 Score=34.13 Aligned_cols=31 Identities=23% Similarity=0.097 Sum_probs=23.0
Q ss_pred eEEEecc--cCcH-HHHHHHHcCCeEEEeeCCHH
Q psy3185 122 NILVPGA--GLGR-LAFEIARRGYVCQGNEFSLF 152 (298)
Q Consensus 122 ~VLdpGc--G~Gr-la~ela~~G~~v~g~D~S~~ 152 (298)
+||+.|+ |+|+ ++..|+++|++|++++-+..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG 35 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch
Confidence 7999995 2444 45556677999999998764
No 460
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=85.30 E-value=3.1 Score=37.83 Aligned_cols=29 Identities=17% Similarity=0.304 Sum_probs=23.9
Q ss_pred CCCeEEEecc--cCcHHHHHHHHc-CCeEEEe
Q psy3185 119 KDVNILVPGA--GLGRLAFEIARR-GYVCQGN 147 (298)
Q Consensus 119 ~~~~VLdpGc--G~Grla~ela~~-G~~v~g~ 147 (298)
++.+||+.|+ |.|.++..+|+. |..|.++
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~ 198 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINV 198 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEE
Confidence 5779999997 789999999985 8876554
No 461
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=85.19 E-value=17 Score=31.25 Aligned_cols=39 Identities=23% Similarity=0.122 Sum_probs=29.6
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
.+.+||+-|++.| + ++..|++.|++|..++-+..-+...
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 60 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAA 60 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3568999998654 2 6667778899999999998766543
No 462
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=85.18 E-value=16 Score=31.65 Aligned_cols=38 Identities=24% Similarity=0.233 Sum_probs=28.3
Q ss_pred CCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 120 DVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 120 ~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
+.+||+-|++.| .++..|+++|+.|..++-+..-+...
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 64 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAA 64 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 568999997654 26667778899999999998765443
No 463
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.16 E-value=16 Score=31.55 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=24.4
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeC
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEF 149 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~ 149 (298)
++..||+-|++.| + ++..|++.|++|..+|.
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 4568999998654 2 66677888999999987
No 464
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.14 E-value=6.4 Score=34.53 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=28.2
Q ss_pred CCeEEEecccC-c-HHHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 120 DVNILVPGAGL-G-RLAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 120 ~~~VLdpGcG~-G-rla~ela~~G~~v~g~D~S~~Ml~ 155 (298)
..+|.++|||. | .++..|++.|++|++.|.++.-+.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~ 41 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVA 41 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 46899999985 3 356667788999999999987543
No 465
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=85.14 E-value=9.4 Score=34.47 Aligned_cols=137 Identities=11% Similarity=0.047 Sum_probs=82.8
Q ss_pred CeEEEecccCcHHHHHHHH-cCCeEEEeeCCHHHHHHHHHHHhhhhhccccccccccccccccccccccccccccCCCCC
Q psy3185 121 VNILVPGAGLGRLAFEIAR-RGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINT 199 (298)
Q Consensus 121 ~~VLdpGcG~Grla~ela~-~G~~v~g~D~S~~Ml~~a~~~l~~~~~~~~~~i~p~~~~~s~~~~~~~~~r~~~ipd~~~ 199 (298)
..|+++|||+=-.++.+.. .+..|.=+|+ +.++...+.++.....
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~-P~vi~~k~~lL~~~~~--------------------------------- 149 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQ-PKVLAYKSTTLAEHGV--------------------------------- 149 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEEC-HHHHHHHHHHHHHTTC---------------------------------
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCC-HHHHHHHHHHHHhcCC---------------------------------
Confidence 4699999999999999883 3577888995 7888777776643110
Q ss_pred CCCCCCCCeeEEecccccccc---CCCcee-----EEEe---cccccCcchHHHHHHHHHHhccCCeEEEE--eccc---
Q psy3185 200 SDYNDDCDFSMAAGDFLQVYV---HPNKWD-----CVAT---CFFIDCANNIVSFIETIFNILKPGGIWIN--LGPL--- 263 (298)
Q Consensus 200 ~~~~~~~~~~~~~gDf~~~~~---~~~~fD-----~V~t---~ffidta~n~~~yl~~I~~~LkpGG~~In--~gPl--- 263 (298)
....+..++.+|+.+-.. ....|| +++. .+++.. +.....++.|...+.||+.++- +.|-
T Consensus 150 ---~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~-~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~ 225 (310)
T 2uyo_A 150 ---TPTADRREVPIDLRQDWPPALRSAGFDPSARTAWLAEGLLMYLPA-TAQDGLFTEIGGLSAVGSRIAVETSPLHGDE 225 (310)
T ss_dssp ---CCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEEEEECSCGGGSCH-HHHHHHHHHHHHTCCTTCEEEEECCCTTCSH
T ss_pred ---CCCCCeEEEecchHhhHHHHHHhccCCCCCCEEEEEechHhhCCH-HHHHHHHHHHHHhCCCCeEEEEEecCCCCcc
Confidence 012466777777765100 112344 2222 123433 4678899999999899987652 1111
Q ss_pred c---------ccccCCC-----CCCccCC--C-HHHHHHHHHhCCCEEE
Q psy3185 264 L---------YHYSNML-----NEDSIEP--S-YEVVKQVIQGLGFVYE 295 (298)
Q Consensus 264 ~---------y~~~~~~-----~~~~~~l--s-~eEl~~~~~~~GF~i~ 295 (298)
. -++.... .-.++.. + .+++.+.+.+.||+..
T Consensus 226 ~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 226 WREQMQLRFRRVSDALGFEQAVDVQELIYHDENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp HHHHHHHHHHHHHC-----------CCTTCCTTCCCHHHHHTTTTEEEE
T ss_pred hhHHHHHHHHHHHHHcCCcCCCCccccccCCCChHHHHHHHHHCcCccc
Confidence 0 1111111 0012333 6 7899999999999876
No 466
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=85.12 E-value=12 Score=32.01 Aligned_cols=36 Identities=17% Similarity=0.031 Sum_probs=25.9
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFML 154 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml 154 (298)
.+.+||+-|++.| .++..|+++|++|.+++-+..-+
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~ 53 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHG 53 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHH
Confidence 3568999997533 24555667799999999887643
No 467
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=84.84 E-value=12 Score=31.39 Aligned_cols=37 Identities=27% Similarity=0.238 Sum_probs=27.3
Q ss_pred CCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 120 DVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 120 ~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
+.+||+-|++.| + ++..|+++|+.|..++-+..-+..
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 41 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEK 41 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 357899997543 2 566677789999999999875543
No 468
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=84.81 E-value=11 Score=32.85 Aligned_cols=38 Identities=24% Similarity=0.121 Sum_probs=28.9
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
.+.+||+-|++.| + ++..|++.|+.|..++-+..-+..
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~ 65 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQ 65 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4568999997544 2 666777889999999998876544
No 469
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=84.81 E-value=15 Score=31.31 Aligned_cols=39 Identities=18% Similarity=0.206 Sum_probs=29.5
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
++.+||+-|++.| + ++..|+++|++|..++-+..-+...
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 46 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEA 46 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3568999997644 2 5667778899999999998766543
No 470
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=84.70 E-value=2.7 Score=37.03 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=26.9
Q ss_pred eEEEecccC-cH-HHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 122 NILVPGAGL-GR-LAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 122 ~VLdpGcG~-Gr-la~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
+|-++|+|. |. ++..|++.|++|++.|.++.-+..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~ 39 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAP 39 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHH
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHH
Confidence 688999885 32 566677889999999999875443
No 471
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=84.67 E-value=6.2 Score=37.82 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=28.0
Q ss_pred CeEEEecccC--cHHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 121 VNILVPGAGL--GRLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 121 ~~VLdpGcG~--Grla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
.+|.++|+|. +.++..|++.|++|++.|-++.-+..
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~ 39 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEE 39 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 3688999885 34667778889999999999876544
No 472
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=84.65 E-value=4.5 Score=35.16 Aligned_cols=33 Identities=12% Similarity=0.028 Sum_probs=24.8
Q ss_pred CCeEEEeccc----CcH-HHHHHHHcCCeEEEeeCCHH
Q psy3185 120 DVNILVPGAG----LGR-LAFEIARRGYVCQGNEFSLF 152 (298)
Q Consensus 120 ~~~VLdpGcG----~Gr-la~ela~~G~~v~g~D~S~~ 152 (298)
+.+||+-|++ .|+ ++..|+++|++|..++-+..
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 43 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5689999974 443 55556677999999988765
No 473
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.65 E-value=8.9 Score=32.86 Aligned_cols=39 Identities=21% Similarity=0.180 Sum_probs=29.8
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
++.+||+-|++.| .++..|+++|+.|..++-+..-+...
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 47 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPL 47 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3568999998765 26667778899999999988765543
No 474
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=84.58 E-value=5.7 Score=35.42 Aligned_cols=38 Identities=21% Similarity=0.101 Sum_probs=28.8
Q ss_pred CCCeEEEecccC-cH-HHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 119 KDVNILVPGAGL-GR-LAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 119 ~~~~VLdpGcG~-Gr-la~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
...+|.++|+|. |. ++..|++.|++|++.|.++.-+..
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~ 47 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAA 47 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 356899998873 33 566677789999999999976544
No 475
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=84.51 E-value=18 Score=31.54 Aligned_cols=36 Identities=19% Similarity=0.170 Sum_probs=26.6
Q ss_pred CCeEEEecccCc--H-HHHHHHHcCCeEEEeeC-CHHHHH
Q psy3185 120 DVNILVPGAGLG--R-LAFEIARRGYVCQGNEF-SLFMLF 155 (298)
Q Consensus 120 ~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~-S~~Ml~ 155 (298)
+.+||+-|++.| + ++..|+++|+.|..++- +..-+.
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~ 64 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIR 64 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHH
Confidence 568999997544 2 66677788999999998 555443
No 476
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=84.50 E-value=4.8 Score=32.03 Aligned_cols=52 Identities=17% Similarity=0.247 Sum_probs=35.4
Q ss_pred ceeEEEecccccCcchHHHHHHHHHHhccCCeEEEEeccccccccCCCCCCccCCCHHHHHHHHHhCCCEEE
Q psy3185 224 KWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGLGFVYE 295 (298)
Q Consensus 224 ~fD~V~t~ffidta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~~~~~~ls~eEl~~~~~~~GF~i~ 295 (298)
..|+|+.+- ..+...+.++.+.+ +.++++|+..|- . .+++.+.+++.|..++
T Consensus 70 ~~Dlvii~v---p~~~v~~v~~~~~~-~g~~~i~i~~~~-------------~---~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 70 KVDMVDVFR---NSEAAWGVAQEAIA-IGAKTLWLQLGV-------------I---NEQAAVLAREAGLSVV 121 (145)
T ss_dssp CCSEEECCS---CSTHHHHHHHHHHH-HTCCEEECCTTC-------------C---CHHHHHHHHTTTCEEE
T ss_pred CCCEEEEEe---CHHHHHHHHHHHHH-cCCCEEEEcCCh-------------H---HHHHHHHHHHcCCEEE
Confidence 568777653 24556677777666 577888874210 1 5788999999998876
No 477
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=84.43 E-value=6.1 Score=36.39 Aligned_cols=38 Identities=24% Similarity=0.197 Sum_probs=30.6
Q ss_pred CCeEEEecccC--cHHHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 120 DVNILVPGAGL--GRLAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 120 ~~~VLdpGcG~--Grla~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
..+|.++|+|. +.++..|++.|++|+..+.++.-+...
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i 68 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEM 68 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 46899999996 346777888999999999998765543
No 478
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=84.38 E-value=13 Score=32.24 Aligned_cols=34 Identities=26% Similarity=0.181 Sum_probs=26.0
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLF 152 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~ 152 (298)
++.+||+-|++.| .++..|++.|+.|..++-+..
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 66 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG 66 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH
Confidence 4678999998654 367777888999999996543
No 479
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=84.26 E-value=1.8 Score=39.50 Aligned_cols=84 Identities=10% Similarity=0.089 Sum_probs=50.4
Q ss_pred CeeEE-ecccccccc--CCCceeEEEec--cccc---------CcchHHHHHHHHHHhccCCeEEEEeccccccccCCCC
Q psy3185 207 DFSMA-AGDFLQVYV--HPNKWDCVATC--FFID---------CANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLN 272 (298)
Q Consensus 207 ~~~~~-~gDf~~~~~--~~~~fD~V~t~--ffid---------ta~n~~~yl~~I~~~LkpGG~~In~gPl~y~~~~~~~ 272 (298)
...+. .||..++.. +++++|+|+|- |... ...-+...+..++++|||||.++.... ++...
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~--~~~~~--- 112 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG--LQYQG--- 112 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC--SCCCC---
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC--ccccc---
Confidence 34566 899876432 45799999884 4432 112356788889999999998764322 11110
Q ss_pred CCccCCCHHHHHHHHHhCC-CEEEE
Q psy3185 273 EDSIEPSYEVVKQVIQGLG-FVYEV 296 (298)
Q Consensus 273 ~~~~~ls~eEl~~~~~~~G-F~i~~ 296 (298)
....-....+...+...| |.+..
T Consensus 113 -~~~~~~l~~l~~~i~~~G~~~~~~ 136 (319)
T 1eg2_A 113 -EAGSGDLISIISHMRQNSKMLLAN 136 (319)
T ss_dssp -CTTBCCHHHHHHHHHHHCCCEEEE
T ss_pred -ccccccHHHHHHHHhCcccceeEE
Confidence 001123456677777777 87654
No 480
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=84.04 E-value=9.3 Score=36.35 Aligned_cols=37 Identities=19% Similarity=0.020 Sum_probs=28.9
Q ss_pred CeEEEecccCc--HHHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 121 VNILVPGAGLG--RLAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 121 ~~VLdpGcG~G--rla~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
.+|-++|+|.= .+|..|++.|++|+++|.++.-+...
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l 41 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQL 41 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHH
Confidence 58999998853 35566788899999999999866543
No 481
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=84.04 E-value=19 Score=30.58 Aligned_cols=36 Identities=22% Similarity=0.115 Sum_probs=27.1
Q ss_pred CCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 120 DVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 120 ~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~ 155 (298)
+.+||+-|++.| .++..|+++|++|..++-+..-+.
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 45 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLR 45 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 568999997544 255666778999999999876554
No 482
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=83.96 E-value=6.3 Score=35.35 Aligned_cols=39 Identities=18% Similarity=0.036 Sum_probs=29.3
Q ss_pred CCCeEEEecccCc--HHHHHHHHcCCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGAGLG--RLAFEIARRGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGcG~G--rla~ela~~G~~v~g~D~S~~Ml~~a~ 158 (298)
...+|.++|+|.= .+|..|++.|++|+.+ .++.-+...+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~ 58 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIE 58 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHH
Confidence 4679999999953 4677788899999999 8877665443
No 483
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=83.87 E-value=18 Score=32.11 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=25.1
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCC
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFS 150 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S 150 (298)
.+..||+-|++.| .++..|++.|+.|..+|.+
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecc
Confidence 3568999998654 2667788889999999876
No 484
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=83.83 E-value=14 Score=32.27 Aligned_cols=38 Identities=24% Similarity=0.126 Sum_probs=29.1
Q ss_pred CCCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 119 KDVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 119 ~~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
.+.+||+-|++.| .++..|++.|+.|..++-+..-+..
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~ 47 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAE 47 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 3568999998654 2666777889999999999876543
No 485
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=83.76 E-value=21 Score=30.99 Aligned_cols=37 Identities=22% Similarity=0.175 Sum_probs=28.5
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~ 155 (298)
++.+||+-|++.| + ++..|+++|+.|..++-+..-+.
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~ 65 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAV 65 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4668999998654 2 66677788999999999876543
No 486
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=83.74 E-value=4.7 Score=34.55 Aligned_cols=36 Identities=36% Similarity=0.332 Sum_probs=25.4
Q ss_pred CCCeEEEecccC--cH-HHHHHHHcCCeEEEeeC-CHHHH
Q psy3185 119 KDVNILVPGAGL--GR-LAFEIARRGYVCQGNEF-SLFML 154 (298)
Q Consensus 119 ~~~~VLdpGcG~--Gr-la~ela~~G~~v~g~D~-S~~Ml 154 (298)
++.+||+.|++. |+ ++..|+++|++|.+++- +..-+
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~ 59 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAA 59 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHH
Confidence 356899999743 22 55556677999999988 66544
No 487
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=83.69 E-value=6.2 Score=34.06 Aligned_cols=37 Identities=27% Similarity=0.240 Sum_probs=27.6
Q ss_pred CCeEEEecccC-cH-HHHHHHHcCCe-EEEeeCCHHHHHH
Q psy3185 120 DVNILVPGAGL-GR-LAFEIARRGYV-CQGNEFSLFMLFA 156 (298)
Q Consensus 120 ~~~VLdpGcG~-Gr-la~ela~~G~~-v~g~D~S~~Ml~~ 156 (298)
+.+|.++|||. |+ ++..|++.|++ |...|-+..-+..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~ 49 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARE 49 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHH
Confidence 46899999973 33 55566777998 9999999875543
No 488
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=83.63 E-value=8.3 Score=32.22 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=24.7
Q ss_pred eEEEecccCcHHHHHHH----HcCCeEEEeeCCHHHHHH
Q psy3185 122 NILVPGAGLGRLAFEIA----RRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 122 ~VLdpGcG~Grla~ela----~~G~~v~g~D~S~~Ml~~ 156 (298)
+|+++|+ |+++..+| +.|++|+.+|.++.-+..
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~ 38 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEE 38 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 6888886 55555554 569999999999886543
No 489
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=83.55 E-value=21 Score=30.83 Aligned_cols=39 Identities=23% Similarity=0.198 Sum_probs=29.6
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
.+.+||+-|++.| + ++..|++.|++|..++-+..-+...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 51 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGA 51 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4568999998544 2 6667778899999999998765543
No 490
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=83.47 E-value=19 Score=30.80 Aligned_cols=35 Identities=14% Similarity=-0.034 Sum_probs=26.6
Q ss_pred CCeEEEecccCc---HHHHHHHHcCCeEEEeeCCHHHH
Q psy3185 120 DVNILVPGAGLG---RLAFEIARRGYVCQGNEFSLFML 154 (298)
Q Consensus 120 ~~~VLdpGcG~G---rla~ela~~G~~v~g~D~S~~Ml 154 (298)
+.+||+-|++.| .++..|+++|++|.+++-+..-+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 44 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG 44 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 568999997544 35666777899999999987644
No 491
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=83.45 E-value=7.4 Score=39.51 Aligned_cols=41 Identities=12% Similarity=0.175 Sum_probs=34.0
Q ss_pred CCCeEEEecccCcHHHHHHHHcC------Ce-EEEeeCCHHHHHHHHH
Q psy3185 119 KDVNILVPGAGLGRLAFEIARRG------YV-CQGNEFSLFMLFASNF 159 (298)
Q Consensus 119 ~~~~VLdpGcG~Grla~ela~~G------~~-v~g~D~S~~Ml~~a~~ 159 (298)
+..+|||+=||.|.++.-|.+.| |+ +.|+|+++.+....+.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~ 258 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKY 258 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHH
Confidence 45789999999999998887776 66 6799999998876543
No 492
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=83.44 E-value=12 Score=35.90 Aligned_cols=33 Identities=12% Similarity=-0.043 Sum_probs=29.4
Q ss_pred CCeEEEecccC--cHHHHHHHHcCCeEEEeeCCHH
Q psy3185 120 DVNILVPGAGL--GRLAFEIARRGYVCQGNEFSLF 152 (298)
Q Consensus 120 ~~~VLdpGcG~--Grla~ela~~G~~v~g~D~S~~ 152 (298)
-.+|-++|+|+ +.+|..+++.|+.|+..|.++.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 35899999997 5688889999999999999998
No 493
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=83.42 E-value=5.9 Score=33.48 Aligned_cols=36 Identities=17% Similarity=0.183 Sum_probs=26.0
Q ss_pred CCCeEEEecccCcH----HHHHHHHcCCeEEEeeCCHHHHH
Q psy3185 119 KDVNILVPGAGLGR----LAFEIARRGYVCQGNEFSLFMLF 155 (298)
Q Consensus 119 ~~~~VLdpGcG~Gr----la~ela~~G~~v~g~D~S~~Ml~ 155 (298)
++.+||+.|++ |. ++..|+++|++|.+++-+..-+.
T Consensus 10 ~~~~vlVtGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~ 49 (255)
T 1fmc_A 10 DGKCAIITGAG-AGIGKEIAITFATAGASVVVSDINADAAN 49 (255)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHTTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 35689999964 44 44555667999999999876443
No 494
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=83.42 E-value=6.4 Score=33.90 Aligned_cols=32 Identities=22% Similarity=0.169 Sum_probs=24.4
Q ss_pred CCeEEEeccc----CcH-HHHHHHHcCCeEEEeeCCH
Q psy3185 120 DVNILVPGAG----LGR-LAFEIARRGYVCQGNEFSL 151 (298)
Q Consensus 120 ~~~VLdpGcG----~Gr-la~ela~~G~~v~g~D~S~ 151 (298)
+.+||+-|++ .|+ ++..|+++|++|..++-+.
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 4689999974 444 5566777899999998876
No 495
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=83.34 E-value=19 Score=31.22 Aligned_cols=38 Identities=26% Similarity=0.149 Sum_probs=29.1
Q ss_pred CCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 120 DVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 120 ~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
+.+||+-|++.| + ++..|++.|+.|..++-+..-+...
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 44 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAI 44 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 458999998644 3 6667778899999999998766543
No 496
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=83.21 E-value=20 Score=30.25 Aligned_cols=37 Identities=30% Similarity=0.289 Sum_probs=28.1
Q ss_pred CCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHHH
Q psy3185 120 DVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLFA 156 (298)
Q Consensus 120 ~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~~ 156 (298)
+.+||+-|++.| + ++..|+++|++|..++-+..-+..
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~ 42 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQ 42 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 357999998544 3 566777889999999999875543
No 497
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=83.16 E-value=5.8 Score=33.72 Aligned_cols=35 Identities=11% Similarity=-0.111 Sum_probs=25.3
Q ss_pred CCeEEEecccCcHHH----HHHHH-cCCeEEEeeCCHHHHH
Q psy3185 120 DVNILVPGAGLGRLA----FEIAR-RGYVCQGNEFSLFMLF 155 (298)
Q Consensus 120 ~~~VLdpGcG~Grla----~ela~-~G~~v~g~D~S~~Ml~ 155 (298)
+.+||+-|++ |.++ ..|++ .|+.|.+++-+..-+.
T Consensus 4 ~k~vlITGas-ggIG~~~a~~L~~~~g~~V~~~~r~~~~~~ 43 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIVRDLCRLFSGDVVLTARDVTRGQ 43 (276)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHHSSSEEEEEESSHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHhcCCeEEEEeCChHHHH
Confidence 5689999964 4444 45566 7999999998876443
No 498
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=83.07 E-value=23 Score=30.89 Aligned_cols=40 Identities=25% Similarity=0.189 Sum_probs=30.9
Q ss_pred CCCeEEEecccCcH---HHHHHHHcCCeEEEeeCCHHHHHHHH
Q psy3185 119 KDVNILVPGAGLGR---LAFEIARRGYVCQGNEFSLFMLFASN 158 (298)
Q Consensus 119 ~~~~VLdpGcG~Gr---la~ela~~G~~v~g~D~S~~Ml~~a~ 158 (298)
++..+|+=|++.|- ++..||+.|+.|..+|.+..-+....
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~ 48 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIV 48 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence 46688999976653 56677888999999999988665443
No 499
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=82.91 E-value=19 Score=31.24 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=26.9
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeC-CHHHHH
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEF-SLFMLF 155 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~-S~~Ml~ 155 (298)
.+..||+-|++.| + ++..|++.|+.|..++. +..-+.
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~ 68 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVA 68 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH
Confidence 3568999997654 2 66777888999999985 555443
No 500
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=82.88 E-value=17 Score=32.36 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=29.9
Q ss_pred CCCeEEEecccCc--H-HHHHHHHcCCeEEEeeCCHHHHHHH
Q psy3185 119 KDVNILVPGAGLG--R-LAFEIARRGYVCQGNEFSLFMLFAS 157 (298)
Q Consensus 119 ~~~~VLdpGcG~G--r-la~ela~~G~~v~g~D~S~~Ml~~a 157 (298)
.+.+||+-|++.| + ++..|+++|+.|.+++-+..-+...
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~ 48 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKA 48 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 3568999998654 2 6666777899999999998766543
Done!