RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3185
(298 letters)
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine
N-methyltransferase, PNMTase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 263
Score = 53.3 bits (127), Expect = 7e-09
Identities = 22/200 (11%), Positives = 58/200 (29%), Gaps = 18/200 (9%)
Query: 103 IISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFML-FASNFIL 161
+ + F ++ + + + G + +L +F ++
Sbjct: 40 KLRCLAQTFATGEVSGRTLIDIGSGPTVYQL-LSACSHFEDITMTDFLEVNRQELGRWLQ 98
Query: 162 NKCREKNVYKIYPWVQQTDNNILT---HHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQV 218
+ N + + + + D +
Sbjct: 99 EEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQP-------QPLGAG 151
Query: 219 YVHPNKWDCVATCFFIDCA-NNIVSFIETIFNI---LKPGGIWINLGPLLYHY--SNMLN 272
P D + + F ++ ++ SF + +I L+PGG + +G L + +
Sbjct: 152 SPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEAR 211
Query: 273 EDSIEPSYEVVKQVIQGLGF 292
+ S E V++ + G+
Sbjct: 212 LTVVPVSEEEVREALVRSGY 231
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 43.2 bits (100), Expect = 1e-05
Identities = 19/197 (9%), Positives = 51/197 (25%), Gaps = 13/197 (6%)
Query: 104 ISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNK 163
+++ L ++ +LVP G + ++ +GY G E S + +
Sbjct: 5 VNKDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAA-------VER 57
Query: 164 CREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPN 223
+ + + Q + T+ C +
Sbjct: 58 YFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDR-AAMIALPADM 116
Query: 224 KWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGP-----LLYHYSNMLNEDSIEP 278
+ V + I ++ G ++ ++ + +
Sbjct: 117 RERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSGNWEVTKVGGQDT 176
Query: 279 SYEVVKQVIQGLGFVYE 295
+ + + GL + E
Sbjct: 177 LHSSARGLKAGLERMDE 193
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 35.7 bits (81), Expect = 0.005
Identities = 25/209 (11%), Positives = 62/209 (29%), Gaps = 35/209 (16%)
Query: 99 CYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASN 158
+ + I+ R ++ IL G G G + +I +
Sbjct: 23 FMDKKLPGIIGRIGD---TKSEIKILSIGGGAGEIDLQILSKVQAQY------------- 66
Query: 159 FILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQV 218
N + P +Q + ++ + ++ + + S +
Sbjct: 67 ----PGVCINNEVVEPSAEQ-----IAKYKELVAKISNLENVKFAWHKETSSEYQSRMLE 117
Query: 219 YVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGP--------LLYHYSNM 270
KWD + + +I + ++ ++L + + L Y +
Sbjct: 118 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSR 177
Query: 271 LNEDSIEP--SYEVVKQVIQGLGFVYEVE 297
+D + + + + Q++ LG YE
Sbjct: 178 FPQDDLCQYITSDDLTQMLDNLGLKYECY 206
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 35.3 bits (80), Expect = 0.007
Identities = 25/215 (11%), Positives = 62/215 (28%), Gaps = 39/215 (18%)
Query: 68 LPNSTDLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKDVNILVPG 127
+P+ + + ++ D +E + + +L + + L
Sbjct: 17 IPDQYADGEAARVWQLYIGDTRSRTAEYKA-----WLLGLLRQHGCHRV-------LDVA 64
Query: 128 AGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHH 187
G G + + G+ + S M + L + + + + N LT
Sbjct: 65 CGTGVDSIMLVEEGFSVTSVDASDKM---LKYALKERWNRRKEPAFDKWVIEEANWLTLD 121
Query: 188 QTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETI 247
+ + D D + G+ + ++ I
Sbjct: 122 KDV----------PAGDGFDAVICLGNSFAHLPDSKGD-----------QSEHRLALKNI 160
Query: 248 FNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEV 282
++++PGG+ L +Y +L+ P +
Sbjct: 161 ASMVRPGGL---LVIDHRNYDYILSTGCAPPGKNI 192
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836)
{Thermus thermophilus [TaxId: 274]}
Length = 254
Score = 33.3 bits (75), Expect = 0.027
Identities = 24/208 (11%), Positives = 52/208 (25%), Gaps = 23/208 (11%)
Query: 86 RDWSEEGSEERKTCYEPI-ISEILARFPPETINPKDVNILV-PGAGLGRLAFEIARRGYV 143
DW E + +P + P T ++ +++ PG G E
Sbjct: 57 EDWLEAWRRD----LKPALAPPFVVLAPWHTWEGAEIPLVIEPGMAFGTGHHET------ 106
Query: 144 CQGNEFSLFMLFASNFILNKCREKNVYKIYP-WVQQTDNNILTHHQTMAVTFPDINTSDY 202
L + V + + + V +
Sbjct: 107 --------TRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQA 158
Query: 203 NDDCDFSMAAGDFLQV-YVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLG 261
+ + FL+ + A + L PGG + G
Sbjct: 159 EANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTG 218
Query: 262 PLLYHYSNMLNEDSIEPSYEVVKQVIQG 289
+L + ++ E + +++ +G
Sbjct: 219 -ILKDRAPLVREAMAGAGFRPLEEAAEG 245
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 31.2 bits (69), Expect = 0.13
Identities = 21/182 (11%), Positives = 46/182 (25%), Gaps = 39/182 (21%)
Query: 100 YEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNF 159
Y+ I+ + + + L G G L + + +
Sbjct: 20 YKKWSDFIIEKCVENNLVFD--DYLDLACGTGNLTENLCPKFKNTWAVDL---------- 67
Query: 160 ILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVY 219
+ + +N + + DI+ + N D D
Sbjct: 68 ------------SQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNYI 115
Query: 220 VHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPS 279
+ + + + + N LK GG++I Y S +L +
Sbjct: 116 IDSDDLK---------------KYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYD 160
Query: 280 YE 281
+
Sbjct: 161 DD 162
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 260
Score = 30.1 bits (67), Expect = 0.24
Identities = 11/83 (13%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 214 DFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNE 273
+ + +A + FI +I K G I +++++ + +
Sbjct: 160 SAYNMDNRDFPGENIADRILMGYVVRTHEFIPKALSIAKDGAI-------IHYHNTVPEK 212
Query: 274 DSIEPSYEVVKQVIQGLGFVYEV 296
+E K++ + G+ E
Sbjct: 213 LMPREPFETFKRITKEYGYDVEK 235
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 29.9 bits (66), Expect = 0.33
Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 119 KDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQ 177
KD +L G G G L+ A+ G G + S + A + I E + I ++
Sbjct: 35 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIE 94
Query: 178 QTDNNILTHHQTMA 191
+ + ++
Sbjct: 95 EVHLPVEKVDVIIS 108
>d1b43a1 a.60.7.1 (A:220-339) Flap endonuclease-1 (Fen-1 nuclease)
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 120
Score = 28.7 bits (64), Expect = 0.37
Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 11/78 (14%)
Query: 14 PEKHQKLLSKYKDHLNDLKSCIDKNYEIIKLIIKDVGVMFENVPSSEPIKLISPLPNSTD 73
+K +++ KD L + D + IK + V + + P D
Sbjct: 27 LKKALEIVRHSKDPLAKFQKQSDVDLYAIKEFFLNP-----PVTDNYNLVWRDP-----D 76
Query: 74 LEKVQTTLKQFVRDWSEE 91
E + L D+SEE
Sbjct: 77 EEGILKFLCDE-HDFSEE 93
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria
monocytogenes [TaxId: 1639]}
Length = 328
Score = 29.9 bits (66), Expect = 0.39
Identities = 37/258 (14%), Positives = 80/258 (31%), Gaps = 26/258 (10%)
Query: 15 EKHQKLLSKYKDHLNDLKSCIDKNY-----EIIKLIIKDVGVMFENVPSSEPIKLISPL- 68
E Q+L + L++ ++ +Y E + + + + E + S + +KL +
Sbjct: 3 EATQELFQVLDNTAIILQNELEISYLEAVYETGENLFQKEVLQKEELSSEKQLKLQASYE 62
Query: 69 ---PNSTDLEKVQTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPETINPKD-VNIL 124
+ E+++ L+ + + G + I I+A + I K V+IL
Sbjct: 63 SIELENFSNEEIRKGLQLALLKGMKHGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSIL 122
Query: 125 VPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNIL 184
P G L + + + + + ++ + +Q+ +L
Sbjct: 123 DPACGTANLLTTVINQLELKGDVDVHASG------VDVDDLLISLALVGADLQRQKMTLL 176
Query: 185 THHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFI 244
+ ++ + + Y C + FI
Sbjct: 177 HQDGLANLLVDPVDVVISD----------LPVGYYPDDENAKTFELCREEGHSFAHFLFI 226
Query: 245 ETIFNILKPGGIWINLGP 262
E KPGG L P
Sbjct: 227 EQGMRYTKPGGYLFFLVP 244
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 29.6 bits (65), Expect = 0.42
Identities = 9/72 (12%), Positives = 20/72 (27%)
Query: 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178
+ +L G G +A A + + +L + + + V + +Q
Sbjct: 15 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ 74
Query: 179 TDNNILTHHQTM 190
H
Sbjct: 75 MPFTDERFHIVT 86
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 29.1 bits (64), Expect = 0.58
Identities = 8/40 (20%), Positives = 17/40 (42%)
Query: 223 NKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGP 262
+K+D F+ + ++ + + +K GG I P
Sbjct: 93 DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEP 132
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia
carotovora [TaxId: 554]}
Length = 225
Score = 28.3 bits (62), Expect = 0.94
Identities = 9/87 (10%), Positives = 22/87 (25%), Gaps = 2/87 (2%)
Query: 106 EILARFPPETINP--KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNK 163
+++ F P + N+L G+ G + E S + + L
Sbjct: 5 DVMHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD 64
Query: 164 CREKNVYKIYPWVQQTDNNILTHHQTM 190
+ + + +
Sbjct: 65 GITYIHSRFEDAQLPRRYDNIVLTHVL 91
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli
[TaxId: 562]}
Length = 245
Score = 28.0 bits (61), Expect = 1.3
Identities = 16/88 (18%), Positives = 24/88 (27%)
Query: 175 WVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFI 234
W + + T ++ + + YV K D A
Sbjct: 51 WARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGAT 110
Query: 235 DCANNIVSFIETIFNILKPGGIWINLGP 262
A E + LKPGGI + P
Sbjct: 111 WIAGGFAGAEELLAQSLKPGGIMLIGEP 138
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase)
{Salmonella typhimurium [TaxId: 90371]}
Length = 113
Score = 26.2 bits (58), Expect = 2.2
Identities = 7/37 (18%), Positives = 15/37 (40%)
Query: 78 QTTLKQFVRDWSEEGSEERKTCYEPIISEILARFPPE 114
+ + +RD+ + E RK I ++ P+
Sbjct: 65 RAEMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPD 101
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis
[TaxId: 1423]}
Length = 234
Score = 26.8 bits (58), Expect = 2.8
Identities = 15/136 (11%), Positives = 37/136 (27%), Gaps = 39/136 (28%)
Query: 123 ILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182
+L GAG G A + C G + + M+ ++ + +NV +
Sbjct: 20 VLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL--- 76
Query: 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVS 242
+ +D + + +++
Sbjct: 77 ------------------------------------PFPDDSFDIITCRYAAHHFSDVRK 100
Query: 243 FIETIFNILKPGGIWI 258
+ + +LK G ++
Sbjct: 101 AVREVARVLKQDGRFL 116
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 188
Score = 26.9 bits (58), Expect = 2.8
Identities = 11/112 (9%), Positives = 28/112 (25%)
Query: 162 NKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVH 221
NK + + + + + Y+ + + +Q
Sbjct: 33 NKLAAGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSD 92
Query: 222 PNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNE 273
V + + + +++KPG + IN L +
Sbjct: 93 LLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALAD 144
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 229
Score = 26.9 bits (58), Expect = 3.0
Identities = 20/183 (10%), Positives = 43/183 (23%), Gaps = 33/183 (18%)
Query: 114 ETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIY 173
+ K +L G G+ A ++ +++ ++ + + R+ + +
Sbjct: 48 AAASSKGGRVLEVGFGMAIAASKVQEAPI------DEHWIIECNDGVFQRLRDWAPRQTH 101
Query: 174 PWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFF 233
+ F I +D
Sbjct: 102 KVIPLKGLWEDVAPTLPDGHFDGI--------------------------LYDTYPLSEE 135
Query: 234 IDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSY-EVVKQVIQGLGF 292
+ F +LKPGG+ + I + E + GF
Sbjct: 136 TWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGF 195
Query: 293 VYE 295
E
Sbjct: 196 RRE 198
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 26.6 bits (58), Expect = 3.3
Identities = 7/59 (11%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 215 FLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLNE 273
+ + D + D + + ++ I +++KPG + P +
Sbjct: 141 TSRSDIADFISDQMYDAVIADIPDP-WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLS 198
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB
{Salmonella typhimurium [TaxId: 90371]}
Length = 198
Score = 26.5 bits (57), Expect = 3.9
Identities = 28/163 (17%), Positives = 42/163 (25%), Gaps = 42/163 (25%)
Query: 96 RKTCYEPIISEILARFPPETINPKDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLF 155
K S++LA + P L G G GR + +A GY + +
Sbjct: 11 EKYGLTRTHSDVLAAAK--VVAPGRT--LDLGCGNGRNSLYLAANGYDVTAWDKN----- 61
Query: 156 ASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDF 215
++ + + D N LT D S F
Sbjct: 62 PASMANLERIKAAEGLDNLQTDLVDLNTLTFDGEY--------------DFILSTVVMMF 107
Query: 216 LQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWI 258
L+ A I I + KPGG +
Sbjct: 108 LE-------------------AQTIPGLIANMQRCTKPGGYNL 131
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella
flexneri [TaxId: 623]}
Length = 250
Score = 26.1 bits (57), Expect = 4.5
Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 5/69 (7%)
Query: 119 KDVNILVPGAGLGRLAFEIARRGYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQ 178
+++ AGLGR AF +A G + E + + + L +
Sbjct: 88 YLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADA-----EIGGW 142
Query: 179 TDNNILTHH 187
+ H
Sbjct: 143 LQERLQLIH 151
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 251
Score = 26.2 bits (56), Expect = 4.9
Identities = 8/86 (9%), Positives = 22/86 (25%)
Query: 173 YPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCF 232
++ + + + N +F + + +
Sbjct: 57 LELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTI 116
Query: 233 FIDCANNIVSFIETIFNILKPGGIWI 258
++ + LKPGG++I
Sbjct: 117 MYFDEEDLRKLFSKVAEALKPGGVFI 142
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa
(LmjF30.0810) {Leishmania major [TaxId: 5664]}
Length = 254
Score = 26.1 bits (56), Expect = 5.3
Identities = 19/124 (15%), Positives = 33/124 (26%), Gaps = 3/124 (2%)
Query: 106 EILARFPPETINPKDVNILVPGAGLGRLAFEIARRGY-VCQGNEFSLFMLFASNFILNKC 164
E F L GAG+GR+ + + Y E ML + L
Sbjct: 80 EGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM 139
Query: 165 REKNVYKIYPWVQQTDNNIL--THHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHP 222
N Q A+ D + + C ++ ++ +
Sbjct: 140 PVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENC 199
Query: 223 NKWD 226
+ D
Sbjct: 200 STGD 203
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 25.8 bits (56), Expect = 6.6
Identities = 17/179 (9%), Positives = 44/179 (24%), Gaps = 39/179 (21%)
Query: 100 YEPIISEILARFPPET---------INPKDVNILVPGAGLGRLAFEIARR--GYVCQGNE 148
Y+ + + P + D + G+G+G + A + G E
Sbjct: 189 YKAFSNYVYGELLPNFLSDVYQQCQLKKGDT-FMDLGSGVGNCVVQAALECGCALSFGCE 247
Query: 149 FSLFMLFASNFILNKCREKNVYKIYPWVQQTDNNILTHHQTMAVTFPDINTSDYNDDCDF 208
+ + +++ + + +N + ++
Sbjct: 248 IMDDASDLTILQYEELKKRCKL----YGMRLNNVEFSLKKSFVDNNR--------VAELI 295
Query: 209 SMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHY 267
+ ++ ++ +E I K G I+L L
Sbjct: 296 PQCDVILVNNFLFD---------------EDLNKKVEKILQTAKVGCKIISLKSLRSLT 339
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga
maritima [TaxId: 2336]}
Length = 266
Score = 25.5 bits (55), Expect = 8.2
Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 220 VHPNKWDCVATCFFIDCANNIVSFIETIFNILKPGGIWINLGPLLYHYSNMLN 272
+ + F+D + ++I+ + LK GG + + P L
Sbjct: 164 ISEGFDEKDVDALFLDVPD-PWNYIDKCWEALKGGGRFATVCPTTNQVQETLK 215
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 25.6 bits (55), Expect = 8.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 119 KDVNILVPGAGLGRLAFEIARRG 141
KD +L G G G L+ A+ G
Sbjct: 38 KDKIVLDVGCGTGILSMFAAKHG 60
>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 169
Score = 25.2 bits (54), Expect = 8.8
Identities = 22/168 (13%), Positives = 52/168 (30%), Gaps = 16/168 (9%)
Query: 132 RLAFEIARR---------GYVCQGNEFSLFMLFASNFILNKCREKNVYKIYPWVQQTDNN 182
R + ++ + GY+ + S L++ I K + + + D
Sbjct: 7 RFRYLLSEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKK 66
Query: 183 ILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANNIVS 242
+ A + + + + + N+ I+ I
Sbjct: 67 KIAEDVKTA---GATIIKNKGATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYGIED 123
Query: 243 FIETIFNILKPGGIWINLGPLLYHYSNMLNEDSIEPSYEVVKQVIQGL 290
++ +I+ G+ L L E+++ S E VK+V+ +
Sbjct: 124 VAISLPSIVNSEGVQEVLQFNLTPEE----EEALRFSAEQVKKVLNEV 167
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389
{Thermotoga maritima [TaxId: 2336]}
Length = 246
Score = 25.1 bits (53), Expect = 9.5
Identities = 11/98 (11%), Positives = 26/98 (26%), Gaps = 4/98 (4%)
Query: 180 DNNILTHHQTMAVTFPDINTSDYNDDCDFSMAAGDFLQVYVHPNKWDCVATCFFIDCANN 239
++ + V D + + + + P + +
Sbjct: 55 KWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLS 114
Query: 240 IVSFIETIFN----ILKPGGIWINLGPLLYHYSNMLNE 273
V + F+ +L P G+ I Y + + E
Sbjct: 115 YVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIE 152
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri
[TaxId: 10381]}
Length = 127
Score = 24.5 bits (53), Expect = 9.8
Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Query: 68 LPNSTDLEKVQTTLKQFVR----DWSEEGSEERKTCYE--PIISEILARFPPETINPKDV 121
LP T L ++QT + R W E + P+ IL R+ + K
Sbjct: 13 LPKFTSLWEIQTEVTVDNRTILLTWMHLLCESFELDKSVFPLSVSILDRYLCKKQGTKKT 72
Query: 122 NILVPGAGL 130
+ A +
Sbjct: 73 LQKIGAACV 81
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.421
Gapped
Lambda K H
0.267 0.0452 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,149,661
Number of extensions: 56014
Number of successful extensions: 211
Number of sequences better than 10.0: 1
Number of HSP's gapped: 209
Number of HSP's successfully gapped: 40
Length of query: 298
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 213
Effective length of database: 1,240,546
Effective search space: 264236298
Effective search space used: 264236298
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.9 bits)