RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy3195
         (119 letters)



>d2dana1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing
           protein 10, ZMYND10 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 47

 Score = 54.3 bits (130), Expect = 5e-12
 Identities = 18/40 (45%), Positives = 20/40 (50%)

Query: 66  RTRCANCNREAFAECSMCRQTPYCSTFCQRKDWTTHQVEC 105
           R RCA C+ EA   CS C+   YC   CQ K W  H   C
Sbjct: 8   RPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC 47


>d2jw6a1 g.85.1.1 (A:503-540) Zinc finger MYND domain-containing
           protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 38

 Score = 53.8 bits (129), Expect = 6e-12
 Identities = 23/37 (62%), Positives = 26/37 (70%)

Query: 69  CANCNREAFAECSMCRQTPYCSTFCQRKDWTTHQVEC 105
           C NC REA +EC+ C +  YCSTFCQRKDW  HQ  C
Sbjct: 2   CVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHIC 38


>d2dj8a1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing
           protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 47

 Score = 53.5 bits (128), Expect = 1e-11
 Identities = 18/38 (47%), Positives = 20/38 (52%)

Query: 68  RCANCNREAFAECSMCRQTPYCSTFCQRKDWTTHQVEC 105
            C NC R+A   CS C    YC +FCQ KDW  H   C
Sbjct: 10  SCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHIC 47


>d1qo5a_ c.1.10.1 (A:) Fructose-1,6-bisphosphate aldolase {Human
           (Homo sapiens), liver isozyme [TaxId: 9606]}
          Length = 360

 Score = 26.5 bits (58), Expect = 0.76
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 5   IQQNAPNAQSGDESNTSADQNSFIDQA 31
           +Q +A  A  G  +N  A Q +F+ +A
Sbjct: 305 LQASALAAWGGKAANKEATQEAFMKRA 331


>d1a5ca_ c.1.10.1 (A:) Fructose-1,6-bisphosphate aldolase
           {Plasmodium falciparum [TaxId: 5833]}
          Length = 342

 Score = 25.7 bits (56), Expect = 1.6
 Identities = 5/27 (18%), Positives = 12/27 (44%)

Query: 5   IQQNAPNAQSGDESNTSADQNSFIDQA 31
           +Q +  N   G + N +  +   + +A
Sbjct: 299 LQASVLNTWQGKKENVAKAREVLLQRA 325


>d2h7zb1 g.7.1.1 (B:1-77) Irditoxin subunit B {Brown tree snake
          (Boiga irregularis) [TaxId: 92519]}
          Length = 77

 Score = 24.4 bits (53), Expect = 2.2
 Identities = 9/27 (33%), Positives = 11/27 (40%)

Query: 67 TRCANCNREAFAECSMCRQTPYCSTFC 93
          T C  CNRE  + C    + P     C
Sbjct: 8  TLCFECNRETCSNCFKDNRCPPYHRTC 34


>d1zaia1 c.1.10.1 (A:1-363) Fructose-1,6-bisphosphate aldolase
           {Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId:
           9986]}
          Length = 363

 Score = 25.3 bits (55), Expect = 2.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 5   IQQNAPNAQSGDESNTSADQNSFIDQA 31
           +Q +A  A  G + N  A Q  ++ +A
Sbjct: 305 LQASALKAWGGKKENLKAAQEEYVKRA 331


>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of
          phosphatidylinositol transfer protein sec14p {Baker's
          yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 93

 Score = 23.6 bits (51), Expect = 4.3
 Identities = 6/25 (24%), Positives = 10/25 (40%)

Query: 6  QQNAPNAQSGDESNTSADQNSFIDQ 30
          Q   P+A  G   N  + Q   + +
Sbjct: 12 QNCPPDALPGTPGNLDSAQEKALAE 36


>d2qapa1 c.1.10.1 (A:1-357) Fructose-1,6-bisphosphate aldolase
           {Trypanosome (Leishmania mexicana) [TaxId: 5665]}
          Length = 357

 Score = 24.6 bits (53), Expect = 4.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 5   IQQNAPNAQSGDESNTSADQNSFIDQA 31
           +Q +A  A  G ES  +A + +F+ +A
Sbjct: 315 LQSSALKAWGGKESGLAAGRRAFLHRA 341


>d2h5fa1 g.7.1.1 (A:3-77) Denmotoxin {Mangrove snake (Boiga
          dendrophila) [TaxId: 46286]}
          Length = 75

 Score = 22.9 bits (49), Expect = 6.0
 Identities = 7/27 (25%), Positives = 12/27 (44%)

Query: 67 TRCANCNREAFAECSMCRQTPYCSTFC 93
            C  CNR+ ++ CS+  +       C
Sbjct: 6  GFCIQCNRKTWSNCSIGHRCLPYHMTC 32


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.128    0.384 

Gapped
Lambda     K      H
   0.267   0.0547    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 383,439
Number of extensions: 15354
Number of successful extensions: 43
Number of sequences better than 10.0: 1
Number of HSP's gapped: 43
Number of HSP's successfully gapped: 19
Length of query: 119
Length of database: 2,407,596
Length adjustment: 74
Effective length of query: 45
Effective length of database: 1,391,576
Effective search space: 62620920
Effective search space used: 62620920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.3 bits)