Query psy3197
Match_columns 459
No_of_seqs 374 out of 1180
Neff 7.0
Searched_HMMs 46136
Date Fri Aug 16 18:46:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3197.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3197hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0566|consensus 100.0 1.3E-52 2.9E-57 447.5 14.4 271 154-445 517-852 (1080)
2 PLN03191 Type I inositol-1,4,5 100.0 9.4E-44 2E-48 372.0 24.5 200 214-421 347-595 (621)
3 smart00128 IPPc Inositol polyp 100.0 2.6E-44 5.7E-49 361.2 18.3 228 183-421 19-308 (310)
4 COG5411 Phosphatidylinositol 5 100.0 3.6E-40 7.7E-45 331.2 11.8 251 184-450 45-356 (460)
5 KOG0566|consensus 100.0 5.9E-36 1.3E-40 320.4 8.0 172 32-212 653-838 (1080)
6 PLN03191 Type I inositol-1,4,5 100.0 7.9E-35 1.7E-39 305.1 6.5 166 34-208 402-592 (621)
7 smart00128 IPPc Inositol polyp 100.0 7.1E-34 1.5E-38 285.7 9.8 167 35-206 121-303 (310)
8 COG5411 Phosphatidylinositol 5 100.0 2E-30 4.3E-35 261.0 8.4 170 33-209 146-328 (460)
9 KOG0565|consensus 99.9 9.5E-22 2E-26 176.8 10.7 136 228-364 2-139 (145)
10 PTZ00312 inositol-1,4,5-tripho 99.7 9E-18 1.9E-22 161.9 2.7 111 36-149 64-218 (356)
11 PTZ00312 inositol-1,4,5-tripho 99.6 4.7E-16 1E-20 150.1 5.0 103 269-383 64-186 (356)
12 TIGR03395 sphingomy sphingomye 99.1 8.5E-10 1.9E-14 110.0 12.2 95 237-346 88-189 (283)
13 KOG1976|consensus 99.0 8.4E-11 1.8E-15 114.1 2.6 45 133-177 305-350 (391)
14 PRK05421 hypothetical protein; 98.9 1.6E-08 3.4E-13 99.8 13.8 214 162-418 43-262 (263)
15 KOG1976|consensus 98.8 1.5E-09 3.2E-14 105.6 3.0 69 269-349 153-232 (391)
16 PRK11756 exonuclease III; Prov 98.5 3.9E-07 8.4E-12 89.8 9.5 124 197-345 24-154 (268)
17 KOG0565|consensus 98.5 1.4E-07 3.1E-12 84.6 4.4 75 33-109 40-137 (145)
18 PTZ00297 pantothenate kinase; 98.2 1.1E-05 2.5E-10 95.7 12.3 168 161-344 9-205 (1452)
19 PF03372 Exo_endo_phos: Endonu 98.1 6.5E-06 1.4E-10 77.3 7.3 134 198-349 28-171 (249)
20 PLN03144 Carbon catabolite rep 98.1 8E-05 1.7E-09 81.1 15.9 150 197-364 296-482 (606)
21 TIGR00633 xth exodeoxyribonucl 98.1 1.7E-05 3.6E-10 77.0 9.7 122 197-346 25-153 (255)
22 smart00476 DNaseIc deoxyribonu 98.1 1.4E-05 3.1E-10 79.3 9.1 126 162-297 17-154 (276)
23 COG3568 ElsH Metal-dependent h 97.9 3.9E-05 8.4E-10 75.0 9.0 56 272-344 118-174 (259)
24 KOG3873|consensus 97.9 3.6E-05 7.7E-10 77.4 8.6 129 204-346 44-182 (422)
25 PRK13911 exodeoxyribonuclease 97.8 0.00012 2.6E-09 71.8 9.3 137 164-344 2-146 (250)
26 TIGR00195 exoDNase_III exodeox 97.5 0.00037 7.9E-09 68.1 8.1 121 197-345 24-149 (254)
27 COG0708 XthA Exonuclease III [ 97.5 0.00051 1.1E-08 67.3 8.8 93 187-299 18-113 (261)
28 KOG2338|consensus 97.3 0.0011 2.3E-08 69.6 8.9 150 198-363 161-318 (495)
29 COG3021 Uncharacterized protei 97.2 0.0029 6.3E-08 63.2 10.5 181 200-417 115-307 (309)
30 KOG2756|consensus 97.1 0.0019 4.2E-08 62.8 8.7 61 277-348 196-257 (349)
31 PRK15251 cytolethal distending 96.0 0.034 7.4E-07 55.0 8.8 85 238-353 116-200 (271)
32 COG2374 Predicted extracellula 63.5 23 0.0005 39.8 7.5 63 284-360 620-697 (798)
33 PF03372 Exo_endo_phos: Endonu 51.8 12 0.00026 34.4 2.7 14 83-96 158-171 (249)
34 TIGR03395 sphingomy sphingomye 48.3 47 0.001 33.1 6.4 14 81-94 177-190 (283)
35 PF14529 Exo_endo_phos_2: Endo 38.3 47 0.001 27.4 4.0 11 336-346 32-42 (119)
36 COG5239 CCR4 mRNA deadenylase, 37.7 44 0.00095 34.5 4.3 44 272-315 121-168 (378)
37 KOG3870|consensus 36.2 14 0.00031 38.4 0.6 16 332-347 350-365 (434)
38 KOG2756|consensus 29.2 66 0.0014 32.1 3.8 65 23-95 183-257 (349)
39 COG3568 ElsH Metal-dependent h 27.9 55 0.0012 32.4 3.1 42 48-91 133-174 (259)
40 KOG3870|consensus 26.1 28 0.00061 36.4 0.7 18 77-94 348-365 (434)
41 smart00476 DNaseIc deoxyribonu 23.9 54 0.0012 32.7 2.2 45 48-95 143-190 (276)
42 cd08164 MPP_Ted1 Saccharomyces 23.7 72 0.0016 30.1 2.9 27 57-90 28-54 (193)
43 PLN03144 Carbon catabolite rep 20.8 74 0.0016 35.4 2.7 26 82-110 456-481 (606)
No 1
>KOG0566|consensus
Probab=100.00 E-value=1.3e-52 Score=447.54 Aligned_cols=271 Identities=27% Similarity=0.461 Sum_probs=225.9
Q ss_pred CCcccccccccCcCcch----hhhhhcc---CCCCCCCCccccccCCC--CCCC-CCceeeeccCCCCC-----------
Q psy3197 154 TCHFDTSHKQRTPSYTD----RILFKSR---QRPPGSPLELSSLFLPD--SLDH-LPDMVVIGTQESYP----------- 212 (459)
Q Consensus 154 ~~~~~~~~k~R~psw~d----Ril~~~~---~~~~~s~~dl~s~ll~~--~~d~-~pd~~vig~QE~~~----------- 212 (459)
+..+.....+|.+.|+. +|+..++ +.......++.+|++|. ..+. .+|+|||||||++.
T Consensus 517 ~~yv~~~L~er~~eyt~~k~i~IfvgTfNvNG~s~~~k~~L~~WLfp~s~~~~~~~aDIyviG~eEvVeLnag~iv~As~ 596 (1080)
T KOG0566|consen 517 HEYVLKELRERRSEYTEPKDISIFVGTFNVNGRSAAFKDDLSDWLFPISRGKEFSPADIYVIGFEEVVELNAGNIVSAST 596 (1080)
T ss_pred hHHHHHHHHHhhhhhccccceEEEEEeeeccCccccchhhHHhhccccccCCcCCcCcEEEEeehhhhhcCccceeccCh
Confidence 33334455567777765 3443332 22233335899999987 4333 48999999999964
Q ss_pred -chhHHHHHHHhhcCC---ceeEEEEeecCceeEEEEEecccccccCCCccccceeeeeeecccCceEEEeeeEcCeEEE
Q psy3197 213 -EREDWEVSIQMTLGH---SFVMLESTTLGTLHLAVYVRRHLIWFCSEPEEADYSVRAGSAFRTKGAVAIGFTLFGSSFL 288 (459)
Q Consensus 213 -~~~~w~~~l~~~L~~---~y~~v~s~~l~gi~l~Vfvr~~~~~~is~v~~~~~~~g~G~~~gNKGaV~i~~~i~~~s~~ 288 (459)
..+.|++.|+.+|+. .|+++.+.||+|++|.+|+|.++.|+|+.|..++++||+||+.||||||+|||.+++|+||
T Consensus 597 tk~~~Wee~i~~~Ln~~~~kYvlL~s~QlvGv~L~iF~r~~~~p~Ik~V~~~tkKTGfGG~tgNKGAVAIrf~~~~TsfC 676 (1080)
T KOG0566|consen 597 TKRRFWEEKILKTLNRYKNKYVLLRSEQLVGVCLLLFIRPDHAPYIKDVAGDTKKTGFGGATGNKGAVAIRFVYHATSFC 676 (1080)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEehhhhheeeEEEEEcccccchhhhcccceeecccccccCCCceEEEEEEeccccEE
Confidence 357799999999964 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccCceeEEEeccccccccCChhHHHHHHhcCCCCCCCC
Q psy3197 289 FVTSHLTAHEERVKDRIDDVRRIVKSLDLPKELPCKHRHKDVTQNYDYVFWCGDLNFRVTQPRDDVIHWFKQQTFPLPPT 368 (459)
Q Consensus 289 FVn~HLaA~~~~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~d~vfw~GDLNyRi~~~~~~v~~~i~~~~~~~~~~ 368 (459)
|||+||||+++++++||.||++|.++|+|+.... +.+||+|||||||||||+++.++|+..|.+++++.
T Consensus 677 Fv~SHlAAG~snv~ERn~DY~tI~r~l~Fp~Gr~--------I~~HD~ifW~GDFNYRI~l~nEEVr~~v~~~d~~k--- 745 (1080)
T KOG0566|consen 677 FVCSHLAAGQSNVEERNEDYKTIARKLRFPRGRM--------IFSHDYIFWLGDFNYRIDLSNEEVRRLVRNQDLDK--- 745 (1080)
T ss_pred EEecccccccchHhhhhhhHHHHHHhccccCCcc--------ccCCceEEEecccceeecCCHHHHHHHHHhccHHH---
Confidence 9999999999999999999999999999987644 35799999999999999999999999999999998
Q ss_pred CCCCccchhHHHHHcCCCc----------------------------------------cCCcceEeeccccCCCCccCC
Q psy3197 369 MPMQLDCQLNKSLSEGSVF----------------------------------------RGGEIQCLHYSSVPSICSSDH 408 (459)
Q Consensus 369 ~~ll~~DQL~~~~~~g~~~----------------------------------------~~~~i~~~~Y~s~~~i~~SDH 408 (459)
|+.+|||++++.+|.+| ++..+..+.|.+.+ +++|||
T Consensus 746 --L~e~DQL~~q~~~G~vF~gF~E~~ltF~PTYKyD~gTd~YDTSeK~R~PAWTDRIL~r~e~~~~l~Y~~~e-l~~SDH 822 (1080)
T KOG0566|consen 746 --LLEYDQLTQQMNAGQVFPGFHEGQLTFPPTYKYDPGTDDYDTSEKCRTPAWTDRILWRGEKLELLSYKRAE-LKTSDH 822 (1080)
T ss_pred --HhhHHHHHHHHhcCcccccccccccccCCcccccCCCCccccchhccCccchhhheecccccccccccccc-ccccCC
Confidence 77889999999999982 23345789999997 999999
Q ss_pred cceeceEEeEEcCCCCcccCCcccchhHHHHHHHHHH
Q psy3197 409 KPVWGLYKCSVRPGTDAVPLNAGAFKRDIYLEAIKKR 445 (459)
Q Consensus 409 kPV~a~f~v~~~~~~~~~p~~~~~~~~~~y~~~~~~~ 445 (459)
|||+|+|++.+..... .-+.+||-|++.+.
T Consensus 823 RPV~A~~~a~i~~Vd~-------~kk~~l~eev~~~~ 852 (1080)
T KOG0566|consen 823 RPVYAIFRAEIFEVDE-------QKKLRLFEEVKERL 852 (1080)
T ss_pred CceEEEEEEEEEEEcH-------HHHHHHHHHHHHHc
Confidence 9999999999875332 24557884444443
No 2
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=100.00 E-value=9.4e-44 Score=372.05 Aligned_cols=200 Identities=27% Similarity=0.362 Sum_probs=173.0
Q ss_pred hhHHHHHHHhhc--CCceeEEEEeecCceeEEEEEecccccccCCCccccceeeeeeecccCceEEEeeeEcCeEEEEEe
Q psy3197 214 REDWEVSIQMTL--GHSFVMLESTTLGTLHLAVYVRRHLIWFCSEPEEADYSVRAGSAFRTKGAVAIGFTLFGSSFLFVT 291 (459)
Q Consensus 214 ~~~w~~~l~~~L--~~~y~~v~s~~l~gi~l~Vfvr~~~~~~is~v~~~~~~~g~G~~~gNKGaV~i~~~i~~~s~~FVn 291 (459)
.+.|...+.... ..+|++|.+.+|+||+|+||+|+++.++|+.++.++++||+||++||||||+|+|.+++++|||||
T Consensus 347 ~~~~~~~~~~~~~~~~~YvkV~S~qLvGl~L~VFvk~~l~~~Is~V~~s~V~tGl~G~~GNKGAVaIr~~l~~Ts~cFVn 426 (621)
T PLN03191 347 YQLPEDLIKDCRKVKQKYVRIVSKQMVGIYVSVWVRKRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRLCFVC 426 (621)
T ss_pred hhhhhHHHHhhccCCCCEEEEEEEeeeeEEEEEEEehhhhhhcccceeeeEeeccccccccceeEEEEEEEcCcEEEEEE
Confidence 355777665554 468999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchh--HHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccCceeEEEeccccccccCChhHHHHHHhcCCCCCCCCC
Q psy3197 292 SHLTAHEER--VKDRIDDVRRIVKSLDLPKELPCKHRHKDVTQNYDYVFWCGDLNFRVTQPRDDVIHWFKQQTFPLPPTM 369 (459)
Q Consensus 292 ~HLaA~~~~--~~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~d~vfw~GDLNyRi~~~~~~v~~~i~~~~~~~~~~~ 369 (459)
|||+||+.. .++||+|+..|++++.|+..... .....+.+||+|||||||||||++++++|+++|+++.|..
T Consensus 427 ~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~~--~~~~~I~dhD~vFWlGDLNYRIdl~~~ev~~lI~~~~~~~---- 500 (621)
T PLN03191 427 SHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLDT--DQPQTIPSHDQIFWFGDLNYRLNMLDTEVRKLVAQKRWDE---- 500 (621)
T ss_pred eccccccccchHHHHHHHHHHHHhccccCccccc--CCCccccccceEEEecCccccccCCHHHHHHHHhhccHHH----
Confidence 999998754 67899999999999999743211 1122356799999999999999999999999999999988
Q ss_pred CCCccchhHHHHHcCCC---------------------------------------ccC------CcceEeeccccCCCC
Q psy3197 370 PMQLDCQLNKSLSEGSV---------------------------------------FRG------GEIQCLHYSSVPSIC 404 (459)
Q Consensus 370 ~ll~~DQL~~~~~~g~~---------------------------------------~~~------~~i~~~~Y~s~~~i~ 404 (459)
|+.+|||..++++|.+ ||| ..++++.|.+ .+++
T Consensus 501 -LL~~DQL~~e~~~g~vF~GF~Eg~I~FpPTYKYd~gSd~Ydg~~~~Ts~KkR~PSWCDRILykg~~i~~l~Y~s-~ei~ 578 (621)
T PLN03191 501 -LINSDQLIKELRSGHVFDGWKEGPIKFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGKGIKQLCYKR-SEIR 578 (621)
T ss_pred -HHHHhHHHHHHHcCCccCCcccCCccCCCCcccccCCccccccccccccCccccchhheEeecCCCceEeEecc-CCcc
Confidence 7788999999887776 333 2468999998 5799
Q ss_pred ccCCcceeceEEeEEcC
Q psy3197 405 SSDHKPVWGLYKCSVRP 421 (459)
Q Consensus 405 ~SDHkPV~a~f~v~~~~ 421 (459)
+||||||+|.|.+.++.
T Consensus 579 ~SDHRPV~A~F~v~V~~ 595 (621)
T PLN03191 579 LSDHRPVSSMFLVEVEV 595 (621)
T ss_pred cCCchhcceEEEEEEEe
Confidence 99999999999999875
No 3
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=100.00 E-value=2.6e-44 Score=361.19 Aligned_cols=228 Identities=29% Similarity=0.486 Sum_probs=195.7
Q ss_pred CCCccccccCCC---CCCCCCceeeeccCCCCC------------chhHHHHHHHhhcC--CceeEEEEeecCceeEEEE
Q psy3197 183 SPLELSSLFLPD---SLDHLPDMVVIGTQESYP------------EREDWEVSIQMTLG--HSFVMLESTTLGTLHLAVY 245 (459)
Q Consensus 183 s~~dl~s~ll~~---~~d~~pd~~vig~QE~~~------------~~~~w~~~l~~~L~--~~y~~v~s~~l~gi~l~Vf 245 (459)
++.++.+|+.+. .....||++|||+||++. ....|.+.+...|+ .+|.++.+.+|+|++++||
T Consensus 19 p~~~l~~~l~~~~~~~~~~~pDI~viglQEi~~~~~~~~~~~~~~~~~~W~~~i~~~l~~~~~Y~~v~~~~l~gi~l~vf 98 (310)
T smart00128 19 PKVDVTSWLFQKIDVKQSEKPDIYVIGLQEVVDLENGVLLETIAGKERLWSKLIESSLNGDGQYNVLAKVRLVGILVLVF 98 (310)
T ss_pred ChhhHHHhhccccccccCCCCCEEEEEeeeecccchhhhhhccchhHHHHHHHHHHhcCCCCceEEEeeeeecceEEEEE
Confidence 345566666542 123679999999999832 24679999999997 7999999999999999999
Q ss_pred EecccccccCCCccccceeeeeeecccCceEEEeeeEcCeEEEEEeccccccchhHHHHHHHHHHHHHhcCCCCCCCCCC
Q psy3197 246 VRRHLIWFCSEPEEADYSVRAGSAFRTKGAVAIGFTLFGSSFLFVTSHLTAHEERVKDRIDDVRRIVKSLDLPKELPCKH 325 (459)
Q Consensus 246 vr~~~~~~is~v~~~~~~~g~G~~~gNKGaV~i~~~i~~~s~~FVn~HLaA~~~~~~~Rn~d~~~I~~~l~f~~~~~~~~ 325 (459)
+|.++.++|+.+..+.+++|+|+.+||||||++++.+.++++|||||||+||+.++++||+||..|++.+.|+.....
T Consensus 99 ~~~~~~~~i~~v~~~~v~~G~~~~~~nKG~v~i~~~~~~~~~~fv~~HL~a~~~~~~~R~~~~~~I~~~~~f~~~~~~-- 176 (310)
T smart00128 99 VKANHLVYIKDVETFTVKTGMGGLWGNKGAVAVRFKLSDTSFCFVNSHLAAGASNVEQRNQDYKTILRALSFPERAEL-- 176 (310)
T ss_pred EehhhcCccceeEeeeeeccccceeecCceEEEEEEEcCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCCCCccc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988753211
Q ss_pred CCCCcccCceeEEEeccccccccCCh-hHHHHHHhcCCCCCCCCCCCCccchhHHHHHcCCC------------------
Q psy3197 326 RHKDVTQNYDYVFWCGDLNFRVTQPR-DDVIHWFKQQTFPLPPTMPMQLDCQLNKSLSEGSV------------------ 386 (459)
Q Consensus 326 ~~~~~~~~~d~vfw~GDLNyRi~~~~-~~v~~~i~~~~~~~~~~~~ll~~DQL~~~~~~g~~------------------ 386 (459)
...++|++||||||||||+++. ++|+++|++++|.. |+.+|||..+++++.+
T Consensus 177 ----~~~~~d~~f~~GDlNyRi~~~~~~~v~~~i~~~~~~~-----Ll~~DQL~~~~~~~~~f~~f~E~~I~F~PTYK~~ 247 (310)
T smart00128 177 ----SQFDHDVVFWFGDLNFRLDSPSYEEVRRKISKKEFDD-----LLEKDQLNRQKEAGKVFKGFQEGPITFPPTYKYD 247 (310)
T ss_pred ----cccccceEEEecCcceeecCCCHHHHHHHHhhCcHHH-----HhhhhhHHHHhhcccccCcCccCCcCCCCCeeec
Confidence 1357999999999999999988 88999999999987 7788999999887665
Q ss_pred -----------------ccCCc--------ceEee-ccccCCCCccCCcceeceEEeEEcC
Q psy3197 387 -----------------FRGGE--------IQCLH-YSSVPSICSSDHKPVWGLYKCSVRP 421 (459)
Q Consensus 387 -----------------~~~~~--------i~~~~-Y~s~~~i~~SDHkPV~a~f~v~~~~ 421 (459)
|||+. +.+.. |.|.+++++||||||+|.|.+.++.
T Consensus 248 ~~~t~~Yd~~~k~R~PsWcDRIL~~~~~~~~~~~~~Y~s~~~~~~SDHkPV~~~f~v~~~~ 308 (310)
T smart00128 248 SVGTETYDTSEKKRVPAWCDRILYRSNGPNLIQLSEYHSGMELTTSDHKPVFATFRLKVTA 308 (310)
T ss_pred CCCCccccCcccccCcchhheehhhccCCCceecccccCCCccCCcCcccccEEEEEEEEe
Confidence 45432 23444 9999999999999999999999874
No 4
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=331.16 Aligned_cols=251 Identities=25% Similarity=0.378 Sum_probs=213.8
Q ss_pred CCccccccCC-CCCCCCCceeeeccCCCCC------------c-hhHHHHHHHhhcC-----CceeEEEEeecCceeEEE
Q psy3197 184 PLELSSLFLP-DSLDHLPDMVVIGTQESYP------------E-REDWEVSIQMTLG-----HSFVMLESTTLGTLHLAV 244 (459)
Q Consensus 184 ~~dl~s~ll~-~~~d~~pd~~vig~QE~~~------------~-~~~w~~~l~~~L~-----~~y~~v~s~~l~gi~l~V 244 (459)
..+...|++| ......+|++|+|+||++. . -..|+..+..+|+ .+|.++.+.+|+++.+.|
T Consensus 45 k~~~k~~lfP~~~~~~~~dlyVvGlQEvv~lt~~sils~~p~~rl~~wes~~~~~Ln~~~~~eky~~l~s~q~~~~~~~v 124 (460)
T COG5411 45 KASTKRWLFPEIEATELADLYVVGLQEVVELTPGSILSADPYDRLRIWESKVLDCLNGAQSDEKYSLLRSPQLGGILLRV 124 (460)
T ss_pred hhhhhhhcccccccccccceEEeccceeeeccchhhccCCcccccchhHHHHHHHhcccccCCceEEecchhccCcceEE
Confidence 4456777777 2335678999999999853 1 2569999988886 479999999999999999
Q ss_pred EEecccccccCCCccccceeeeeeecccCceEEEeeeEcCeEEEEEeccccccchhHHHHHHHHHHHHHhcCCCCCCCCC
Q psy3197 245 YVRRHLIWFCSEPEEADYSVRAGSAFRTKGAVAIGFTLFGSSFLFVTSHLTAHEERVKDRIDDVRRIVKSLDLPKELPCK 324 (459)
Q Consensus 245 fvr~~~~~~is~v~~~~~~~g~G~~~gNKGaV~i~~~i~~~s~~FVn~HLaA~~~~~~~Rn~d~~~I~~~l~f~~~~~~~ 324 (459)
|++.+..+.++.|+....++|+||..+|||||++++.+..+++||||+||+||.+|.++|+.||+.|.+.++|++...+
T Consensus 125 f~~~~~~~v~~~V~~~~~KtG~gg~s~nKGav~i~~~~~~t~~cFv~shlaag~~N~eeR~~Dy~~I~~~i~f~~g~~I- 203 (460)
T COG5411 125 FSLATNLPVVKPVSGTVKKTGFGGSSSNKGAVAIRFNYERTSFCFVNSHLAAGVNNIEERIFDYRSIASNICFSRGLRI- 203 (460)
T ss_pred eeeccccceeccccccccccccceecccccccceeEEeecCCcEEEecchhcccccHHHHHHHHHHHHHheecCCCcee-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999866543
Q ss_pred CCCCCcccCceeEEEeccccccccCChhHHHHHHhcCC--CCCCCCCCCCccchhHHHHHcCCC----------------
Q psy3197 325 HRHKDVTQNYDYVFWCGDLNFRVTQPRDDVIHWFKQQT--FPLPPTMPMQLDCQLNKSLSEGSV---------------- 386 (459)
Q Consensus 325 ~~~~~~~~~~d~vfw~GDLNyRi~~~~~~v~~~i~~~~--~~~~~~~~ll~~DQL~~~~~~g~~---------------- 386 (459)
.+||++||+|||||||+...++|+..+...+ +.. ++.+|||..+++.|.+
T Consensus 204 -------~~hdti~w~GDlNyRVts~~e~v~~~~~~~~g~~~~-----l~~~DqL~~e~~~g~~f~~f~E~~i~FpPTYK 271 (460)
T COG5411 204 -------YDHDTIFWLGDLNYRVTSTNEEVRPEIASDDGRLDK-----LFEYDQLLWEMEVGNVFPGFKEPVITFPPTYK 271 (460)
T ss_pred -------cccceEEEecccCceeecCchhcchhhhCCcchhhh-----hhhhhhHhhhhcccccccceecccccCCCceE
Confidence 4689999999999999999999988777655 444 6677999999998887
Q ss_pred ------------------ccCCc------ceEeeccccCCCCccCCcceeceEEeEEcCCCCcccCCcccchhHHHHHHH
Q psy3197 387 ------------------FRGGE------IQCLHYSSVPSICSSDHKPVWGLYKCSVRPGTDAVPLNAGAFKRDIYLEAI 442 (459)
Q Consensus 387 ------------------~~~~~------i~~~~Y~s~~~i~~SDHkPV~a~f~v~~~~~~~~~p~~~~~~~~~~y~~~~ 442 (459)
|||+. ++.+.|.|+|.+.+||||||+|+|++.+.... .+|.. .+.+++|.+.+
T Consensus 272 fd~gt~~ydtsdk~RiPsWtDRIl~~s~~~~p~sY~sip~l~~SDHrPV~a~~~~~i~~~d-~~~k~--~~~~~l~~~~~ 348 (460)
T COG5411 272 FDYGTDEYDTSDKGRIPSWTDRILYKSEQLTPHSYSSIPHLMISDHRPVYATFRAKIKVVD-PSKKE--GLIEKLYAEYK 348 (460)
T ss_pred eecCCccccccccccCCchhhhhhhhccccccccccccCceeecCCCeEEEEEecceEEeC-cchhh--hhhhhhhhhhc
Confidence 55532 57899999999999999999999999988754 33443 58888998888
Q ss_pred HHHhhhcc
Q psy3197 443 KKRATLYN 450 (459)
Q Consensus 443 ~~~~~~~~ 450 (459)
++...-.+
T Consensus 349 t~~~~~~~ 356 (460)
T COG5411 349 TELGEAGD 356 (460)
T ss_pred cccccccC
Confidence 87765433
No 5
>KOG0566|consensus
Probab=100.00 E-value=5.9e-36 Score=320.37 Aligned_cols=172 Identities=32% Similarity=0.565 Sum_probs=146.9
Q ss_pred EEEEEeecCCccccc-----ceeeeehhhhhhhH--H-HH----HHHHhhhcccccccccCcceEEEeccccccccCChh
Q psy3197 32 IYVGTWNMNGQAEQQ-----SMLCLVLQSWTRHY--L-TE----IFISMYLEYERTNVTQNYDYVFWCGDLNFRVTQPRD 99 (459)
Q Consensus 32 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~-~~----~~~~~~~~~~~~~~~~~~d~vfw~GDlNfRi~~~~~ 99 (459)
=|-|..||||++.-+ |.+|||+.|++|++ + +| .-+.+.++|.++..+..||+|||||||||||+++.+
T Consensus 653 GfGG~tgNKGAVAIrf~~~~TsfCFv~SHlAAG~snv~ERn~DY~tI~r~l~Fp~Gr~I~~HD~ifW~GDFNYRI~l~nE 732 (1080)
T KOG0566|consen 653 GFGGATGNKGAVAIRFVYHATSFCFVCSHLAAGQSNVEERNEDYKTIARKLRFPRGRMIFSHDYIFWLGDFNYRIDLSNE 732 (1080)
T ss_pred ccccccCCCceEEEEEEeccccEEEEecccccccchHhhhhhhHHHHHHhccccCCccccCCceEEEecccceeecCCHH
Confidence 367899999999964 99999999999855 3 22 244789999999999999999999999999999999
Q ss_pred hHHHHHhcCCCCCCCCCCCccchhhhhhhhcCCCCCCCcccCcccCCeeeecCCCCcccccccccCcCcchhhhhhccCC
Q psy3197 100 DVIHWFKQQTFPLPPTMPMQLDCQLNKSLSEGSVFRGFEEGPITFPPTFKYDPGTCHFDTSHKQRTPSYTDRILFKSRQR 179 (459)
Q Consensus 100 ~~~~~i~~~~~~~~~~~~l~~~DqL~~~~~~~~~f~~f~E~~I~F~PTyK~~~~~~~~~~~~k~R~psw~dRil~~~~~~ 179 (459)
+|+..|.+++++ .|+++|||+++|.+|.+|.||.|++|+|+||||||++++.||+++|.|+|||||||||+....
T Consensus 733 EVr~~v~~~d~~-----kL~e~DQL~~q~~~G~vF~gF~E~~ltF~PTYKyD~gTd~YDTSeK~R~PAWTDRIL~r~e~~ 807 (1080)
T KOG0566|consen 733 EVRRLVRNQDLD-----KLLEYDQLTQQMNAGQVFPGFHEGQLTFPPTYKYDPGTDDYDTSEKCRTPAWTDRILWRGEKL 807 (1080)
T ss_pred HHHHHHHhccHH-----HHhhHHHHHHHHhcCcccccccccccccCCcccccCCCCccccchhccCccchhhheeccccc
Confidence 999999999886 488999999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCccccccCCCCCCCCCceeee--ccCCCCC
Q psy3197 180 PPGSPLELSSLFLPDSLDHLPDMVVI--GTQESYP 212 (459)
Q Consensus 180 ~~~s~~dl~s~ll~~~~d~~pd~~vi--g~QE~~~ 212 (459)
.+ ..|.+-.+ ..+||+|++.++ -++|...
T Consensus 808 ~~---l~Y~~~el-~~SDHRPV~A~~~a~i~~Vd~ 838 (1080)
T KOG0566|consen 808 EL---LSYKRAEL-KTSDHRPVYAIFRAEIFEVDE 838 (1080)
T ss_pred cc---cccccccc-cccCCCceEEEEEEEEEEEcH
Confidence 33 33443333 346999998887 3445443
No 6
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=100.00 E-value=7.9e-35 Score=305.12 Aligned_cols=166 Identities=29% Similarity=0.452 Sum_probs=131.7
Q ss_pred EEEeecCCcccc-----cceeeeehhhhhhhH----HH-HH----HHHhhhccc------ccccccCcceEEEecccccc
Q psy3197 34 VGTWNMNGQAEQ-----QSMLCLVLQSWTRHY----LT-EI----FISMYLEYE------RTNVTQNYDYVFWCGDLNFR 93 (459)
Q Consensus 34 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~-~~----~~~~~~~~~------~~~~~~~~d~vfw~GDlNfR 93 (459)
.|+|||||++.. ++.+|||+|||+++. .+ |. -+-+.+.|. ....+.+||+||||||||||
T Consensus 402 ~G~~GNKGAVaIr~~l~~Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~~~~~~~I~dhD~vFWlGDLNYR 481 (621)
T PLN03191 402 MGYMGNKGSVSISMSLFQSRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYR 481 (621)
T ss_pred ccccccceeEEEEEEEcCcEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccccCCCccccccceEEEecCcccc
Confidence 477899999984 599999999999843 22 31 011233332 22356789999999999999
Q ss_pred ccCChhhHHHHHhcCCCCCCCCCCCccchhhhhhhhcCCCCCCCcccCcccCCeeeecCCCCccc-----ccccccCcCc
Q psy3197 94 VTQPRDDVIHWFKQQTFPLPPTMPMQLDCQLNKSLSEGSVFRGFEEGPITFPPTFKYDPGTCHFD-----TSHKQRTPSY 168 (459)
Q Consensus 94 i~~~~~~~~~~i~~~~~~~~~~~~l~~~DqL~~~~~~~~~f~~f~E~~I~F~PTyK~~~~~~~~~-----~~~k~R~psw 168 (459)
|+++.+++.+++.++.+.. |+.+|||.++++++.+|.||+|++|+|+|||||+.+++.|+ ++.|+|+|||
T Consensus 482 Idl~~~ev~~lI~~~~~~~-----LL~~DQL~~e~~~g~vF~GF~Eg~I~FpPTYKYd~gSd~Ydg~~~~Ts~KkR~PSW 556 (621)
T PLN03191 482 LNMLDTEVRKLVAQKRWDE-----LINSDQLIKELRSGHVFDGWKEGPIKFPPTYKYEINSDRYVGENPKEGEKKRSPAW 556 (621)
T ss_pred ccCCHHHHHHHHhhccHHH-----HHHHhHHHHHHHcCCccCCcccCCccCCCCcccccCCccccccccccccCccccch
Confidence 9999999999999888763 78899999999999999999999999999999999999987 6789999999
Q ss_pred chhhhhhccCCCCCCCCccccccCCCCCCCCCceeeeccC
Q psy3197 169 TDRILFKSRQRPPGSPLELSSLFLPDSLDHLPDMVVIGTQ 208 (459)
Q Consensus 169 ~dRil~~~~~~~~~s~~dl~s~ll~~~~d~~pd~~vig~Q 208 (459)
||||||++.... ...|.+.- ...+||.|+...+-++
T Consensus 557 CDRILykg~~i~---~l~Y~s~e-i~~SDHRPV~A~F~v~ 592 (621)
T PLN03191 557 CDRILWLGKGIK---QLCYKRSE-IRLSDHRPVSSMFLVE 592 (621)
T ss_pred hheEeecCCCce---EeEeccCC-cccCCchhcceEEEEE
Confidence 999999865322 23343322 2458999998877654
No 7
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=100.00 E-value=7.1e-34 Score=285.66 Aligned_cols=167 Identities=35% Similarity=0.589 Sum_probs=130.5
Q ss_pred EEeecCCcccc-----cceeeeehhhhhhhH--H-HHH----HHHhhhccccccc--ccCcceEEEeccccccccCCh-h
Q psy3197 35 GTWNMNGQAEQ-----QSMLCLVLQSWTRHY--L-TEI----FISMYLEYERTNV--TQNYDYVFWCGDLNFRVTQPR-D 99 (459)
Q Consensus 35 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~-~~~----~~~~~~~~~~~~~--~~~~d~vfw~GDlNfRi~~~~-~ 99 (459)
|.|+++|++.. .+.+||++|||+++. + +|. -+...+.+..... +.++|++||||||||||+++. +
T Consensus 121 ~~~~nKG~v~i~~~~~~~~~~fv~~HL~a~~~~~~~R~~~~~~I~~~~~f~~~~~~~~~~~d~~f~~GDlNyRi~~~~~~ 200 (310)
T smart00128 121 GLWGNKGAVAVRFKLSDTSFCFVNSHLAAGASNVEQRNQDYKTILRALSFPERAELSQFDHDVVFWFGDLNFRLDSPSYE 200 (310)
T ss_pred ceeecCceEEEEEEEcCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCCCCccccccccceEEEecCcceeecCCCHH
Confidence 46889999885 378999999999744 2 221 1123444443322 468999999999999999987 7
Q ss_pred hHHHHHhcCCCCCCCCCCCccchhhhhhhhcCCCCCCCcccCcccCCeeeec-CCCCcccccccccCcCcchhhhhhccC
Q psy3197 100 DVIHWFKQQTFPLPPTMPMQLDCQLNKSLSEGSVFRGFEEGPITFPPTFKYD-PGTCHFDTSHKQRTPSYTDRILFKSRQ 178 (459)
Q Consensus 100 ~~~~~i~~~~~~~~~~~~l~~~DqL~~~~~~~~~f~~f~E~~I~F~PTyK~~-~~~~~~~~~~k~R~psw~dRil~~~~~ 178 (459)
++.++++.+++. .|+.+|||..+++++.+|.||.|++|+|+|||||+ .+++.|+++.|+|+|||||||||+...
T Consensus 201 ~v~~~i~~~~~~-----~Ll~~DQL~~~~~~~~~f~~f~E~~I~F~PTYK~~~~~t~~Yd~~~k~R~PsWcDRIL~~~~~ 275 (310)
T smart00128 201 EVRRKISKKEFD-----DLLEKDQLNRQKEAGKVFKGFQEGPITFPPTYKYDSVGTETYDTSEKKRVPAWCDRILYRSNG 275 (310)
T ss_pred HHHHHHhhCcHH-----HHhhhhhHHHHhhcccccCcCccCCcCCCCCeeecCCCCccccCcccccCcchhheehhhccC
Confidence 888999988875 37889999999999999999999999999999999 999999999999999999999998632
Q ss_pred CCCCCCCccccccCCCCCCCCCceeeec
Q psy3197 179 RPPGSPLELSSLFLPDSLDHLPDMVVIG 206 (459)
Q Consensus 179 ~~~~s~~dl~s~ll~~~~d~~pd~~vig 206 (459)
.......+|.+..-...+||.|+...+.
T Consensus 276 ~~~~~~~~Y~s~~~~~~SDHkPV~~~f~ 303 (310)
T smart00128 276 PNLIQLSEYHSGMELTTSDHKPVFATFR 303 (310)
T ss_pred CCceecccccCCCccCCcCcccccEEEE
Confidence 2222222355544445689999987764
No 8
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=2e-30 Score=260.99 Aligned_cols=170 Identities=34% Similarity=0.497 Sum_probs=142.1
Q ss_pred EEEEeecCCcccc-----cceeeeehhhhhhhHH---HHHHH----HhhhcccccccccCcceEEEeccccccccCChhh
Q psy3197 33 YVGTWNMNGQAEQ-----QSMLCLVLQSWTRHYL---TEIFI----SMYLEYERTNVTQNYDYVFWCGDLNFRVTQPRDD 100 (459)
Q Consensus 33 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~d~vfw~GDlNfRi~~~~~~ 100 (459)
|.|..++||++.- ++.+|||++|++++.. +|++. ...+.+.++--+.+||++||+|||||||.+..++
T Consensus 146 ~gg~s~nKGav~i~~~~~~t~~cFv~shlaag~~N~eeR~~Dy~~I~~~i~f~~g~~I~~hdti~w~GDlNyRVts~~e~ 225 (460)
T COG5411 146 FGGSSSNKGAVAIRFNYERTSFCFVNSHLAAGVNNIEERIFDYRSIASNICFSRGLRIYDHDTIFWLGDLNYRVTSTNEE 225 (460)
T ss_pred cceecccccccceeEEeecCCcEEEecchhcccccHHHHHHHHHHHHHheecCCCceecccceEEEecccCceeecCchh
Confidence 5677788999884 4899999999998653 66665 4678888888999999999999999999999999
Q ss_pred HHHHHhcCC-CCCCCCCCCccchhhhhhhhcCCCCCCCcccCcccCCeeeecCCCCcccccccccCcCcchhhhhhccCC
Q psy3197 101 VIHWFKQQT-FPLPPTMPMQLDCQLNKSLSEGSVFRGFEEGPITFPPTFKYDPGTCHFDTSHKQRTPSYTDRILFKSRQR 179 (459)
Q Consensus 101 ~~~~i~~~~-~~~~~~~~l~~~DqL~~~~~~~~~f~~f~E~~I~F~PTyK~~~~~~~~~~~~k~R~psw~dRil~~~~~~ 179 (459)
+...+..+. +. ..+..+|||..++..+.+|.+|.|..|+|+|||||+.+++.|+++.|.|+||||||||+++.+-
T Consensus 226 v~~~~~~~~g~~----~~l~~~DqL~~e~~~g~~f~~f~E~~i~FpPTYKfd~gt~~ydtsdk~RiPsWtDRIl~~s~~~ 301 (460)
T COG5411 226 VRPEIASDDGRL----DKLFEYDQLLWEMEVGNVFPGFKEPVITFPPTYKFDYGTDEYDTSDKGRIPSWTDRILYKSEQL 301 (460)
T ss_pred cchhhhCCcchh----hhhhhhhhHhhhhcccccccceecccccCCCceEeecCCccccccccccCCchhhhhhhhcccc
Confidence 888877665 21 2377899999999999999999999999999999999999999999999999999999998754
Q ss_pred CCCCCCccccccCCCCCCCCCceeeeccCC
Q psy3197 180 PPGSPLELSSLFLPDSLDHLPDMVVIGTQE 209 (459)
Q Consensus 180 ~~~s~~dl~s~ll~~~~d~~pd~~vig~QE 209 (459)
.+....++-+..+ +||+|+..+++.--
T Consensus 302 ~p~sY~sip~l~~---SDHrPV~a~~~~~i 328 (460)
T COG5411 302 TPHSYSSIPHLMI---SDHRPVYATFRAKI 328 (460)
T ss_pred ccccccccCceee---cCCCeEEEEEecce
Confidence 4444444433333 69999999887543
No 9
>KOG0565|consensus
Probab=99.86 E-value=9.5e-22 Score=176.76 Aligned_cols=136 Identities=29% Similarity=0.426 Sum_probs=115.4
Q ss_pred ceeEEEEeecCceeEEEEEecccccccCCCccccceeeeeeecccCceEEEeeeEcCeEEEEEeccccccchhHHH-HHH
Q psy3197 228 SFVMLESTTLGTLHLAVYVRRHLIWFCSEPEEADYSVRAGSAFRTKGAVAIGFTLFGSSFLFVTSHLTAHEERVKD-RID 306 (459)
Q Consensus 228 ~y~~v~s~~l~gi~l~Vfvr~~~~~~is~v~~~~~~~g~G~~~gNKGaV~i~~~i~~~s~~FVn~HLaA~~~~~~~-Rn~ 306 (459)
.|..+.+.+++++.+.+|++..+.+++..+....+++|+++.+||||+|++++.++++++|||+|||+||..+..+ ||+
T Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~nkg~v~is~~~~~~~~~~v~~hl~~~~~~~~~~r~~ 81 (145)
T KOG0565|consen 2 LYVVVASGRLVGIDLSVLLRRDLLDHSFNVRVSEVGTGIMGYLGNKGGVAISFVLSQTSFCFVISHLTSGVHKVYERRNE 81 (145)
T ss_pred cEEEEeeeEEEEEEEEEEehhhhhhhhcccEEEEecceEEEEeCCCCeEEEEEEEcCceEEEEEecccccchhhHHHhhc
Confidence 4778899999999999999999999999999999999999999999999999999999999999999999999888 999
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCcccCceeEEEeccccccccCC-hhHHHHHHhcCCCC
Q psy3197 307 DVRRIVKSLDLPKELPCKHRHKDVTQNYDYVFWCGDLNFRVTQP-RDDVIHWFKQQTFP 364 (459)
Q Consensus 307 d~~~I~~~l~f~~~~~~~~~~~~~~~~~d~vfw~GDLNyRi~~~-~~~v~~~i~~~~~~ 364 (459)
|+.+|.+...|+...+... .......||.|||+||||||+..+ ..++...+....++
T Consensus 82 d~~~i~~~~~~~~~~~~~~-~~~~~~~~D~v~w~GDlN~Rl~~~~~~~~~~~~~~~~~~ 139 (145)
T KOG0565|consen 82 DYQEILNGLRFPSVSPASE-PVISDGEHDTVIWLGDLNYRLSGPSYLEVRTLISVKSRD 139 (145)
T ss_pred cHHHHHhhccccccCcccc-cccccccccEEEEecceeeeecCcccccchhhhhhcchh
Confidence 9999999999976543221 111112289999999999999987 56666666655543
No 10
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=99.68 E-value=9e-18 Score=161.94 Aligned_cols=111 Identities=16% Similarity=0.202 Sum_probs=71.7
Q ss_pred EeecCCccccc-----ceeeeehhhhhhhH--H------------HHHHH-HhhhcccccccccCcceEEEecccccccc
Q psy3197 36 TWNMNGQAEQQ-----SMLCLVLQSWTRHY--L------------TEIFI-SMYLEYERTNVTQNYDYVFWCGDLNFRVT 95 (459)
Q Consensus 36 ~~~~~~~~~~~-----~~~~~~~~~~~~~~--~------------~~~~~-~~~~~~~~~~~~~~~d~vfw~GDlNfRi~ 95 (459)
.|.-||--.++ +.+||||+||..+. + +|+-. ..-+. ...+...+.|++|||||||||++
T Consensus 64 kwSRKGfmrtrw~i~~t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~-r~~~~~~~~~~lF~fGDfNyRld 142 (356)
T PTZ00312 64 GRSRKGFLLLSLRLGTVVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIA-ECSAFISPSDPLFIFGDFNVRLD 142 (356)
T ss_pred CccccceEEEEEEECCEEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHH-HHhhccCCCCcEEEeccceeeec
Confidence 36666666653 77899999988311 1 22111 11111 12345568899999999999999
Q ss_pred CChhhHHHHHhcC-CCCC---------C-CCCCCccchhhhhhhhc-------------CCCCCCCcccCcccCCeee
Q psy3197 96 QPRDDVIHWFKQQ-TFPL---------P-PTMPMQLDCQLNKSLSE-------------GSVFRGFEEGPITFPPTFK 149 (459)
Q Consensus 96 ~~~~~~~~~i~~~-~~~~---------~-~~~~l~~~DqL~~~~~~-------------~~~f~~f~E~~I~F~PTyK 149 (459)
... ..+++... +... + ....|+.+|||.++++. ...|.++.|+||+||||||
T Consensus 143 ~~~--~~e~L~ek~Ql~ve~~~g~~~~P~hf~~Lf~~dQl~rE~~~fd~e~q~l~~~va~~s~~eLaE~pI~FpPTYk 218 (356)
T PTZ00312 143 GHN--LLEWLKEKMQIDVKIEVKRVRAPDRFWELFTNPQTQGEIRRFDLELQRLMDVVAQQSGVELAEFAIRFPPTYP 218 (356)
T ss_pred ccc--HHHHhcccccccccccccccCChHHHHHHhcChhhhHHHhhhhhhhhhhhhhhhhhcccchhcccccCCCcch
Confidence 643 34454422 1111 0 01236778999999985 5677799999999999999
No 11
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=99.60 E-value=4.7e-16 Score=150.13 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=75.8
Q ss_pred ecccCceEEEeeeEcCeEEEEEeccccccchhHHH-----------HHHHHHHHHHhcCCCCCCCCCCCCCCcccCceeE
Q psy3197 269 AFRTKGAVAIGFTLFGSSFLFVTSHLTAHEERVKD-----------RIDDVRRIVKSLDLPKELPCKHRHKDVTQNYDYV 337 (459)
Q Consensus 269 ~~gNKGaV~i~~~i~~~s~~FVn~HLaA~~~~~~~-----------Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~d~v 337 (459)
.|+.||.+.+|+.++++.|||||+||.++.+|... |.+++..|+.++. +....++++
T Consensus 64 kwSRKGfmrtrw~i~~t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~------------~~~~~~~~l 131 (356)
T PTZ00312 64 GRSRKGFLLLSLRLGTVVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECS------------AFISPSDPL 131 (356)
T ss_pred CccccceEEEEEEECCEEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHh------------hccCCCCcE
Confidence 47899999999999999999999999999887644 7899999998652 112356899
Q ss_pred EEeccccccccCCh--hHHH------HHHhcCCCCCCCCCC-CCccchhHHHHHc
Q psy3197 338 FWCGDLNFRVTQPR--DDVI------HWFKQQTFPLPPTMP-MQLDCQLNKSLSE 383 (459)
Q Consensus 338 fw~GDLNyRi~~~~--~~v~------~~i~~~~~~~~~~~~-ll~~DQL~~~~~~ 383 (459)
|||||||||++... +.+. -.++.++...+.+++ |+.+|||++++++
T Consensus 132 F~fGDfNyRld~~~~~e~L~ek~Ql~ve~~~g~~~~P~hf~~Lf~~dQl~rE~~~ 186 (356)
T PTZ00312 132 FIFGDFNVRLDGHNLLEWLKEKMQIDVKIEVKRVRAPDRFWELFTNPQTQGEIRR 186 (356)
T ss_pred EEeccceeeeccccHHHHhcccccccccccccccCChHHHHHHhcChhhhHHHhh
Confidence 99999999998532 1111 112334444445554 5566999988773
No 12
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=99.08 E-value=8.5e-10 Score=109.96 Aligned_cols=95 Identities=20% Similarity=0.274 Sum_probs=65.5
Q ss_pred cCceeEEEEEecccccccCCCccccceeeee-eecccCceEEEeeeEcCeEEEEEeccccccc------hhHHHHHHHHH
Q psy3197 237 LGTLHLAVYVRRHLIWFCSEPEEADYSVRAG-SAFRTKGAVAIGFTLFGSSFLFVTSHLTAHE------ERVKDRIDDVR 309 (459)
Q Consensus 237 l~gi~l~Vfvr~~~~~~is~v~~~~~~~g~G-~~~gNKGaV~i~~~i~~~s~~FVn~HLaA~~------~~~~~Rn~d~~ 309 (459)
...-+++|++|.++......+ +..+.| ....+||++.+++.+.+..+.++|.||.+.. .....|..|+.
T Consensus 88 ~~~~G~~iLSr~Pi~~~~~~~----f~~~~~~d~~~~kg~l~a~i~~~g~~~~v~~THL~~~~~~~~~~~~~~~R~~Q~~ 163 (283)
T TIGR03395 88 LEDGGVAIVSKWPIEEKIQYI----FNKGCGADNLSNKGFAYVKINKNGKKFHVIGTHLQAQDSMCSKLGPASIRANQLN 163 (283)
T ss_pred ccCCEEEEEECCCccccEEEE----ccCCCCCccccCCceEEEEEecCCeEEEEEEeCCCCCcccccccccHHHHHHHHH
Confidence 456689999998876442211 111222 2346899999999999999999999999853 12467999999
Q ss_pred HHHHhcCCCCCCCCCCCCCCcccCceeEEEecccccc
Q psy3197 310 RIVKSLDLPKELPCKHRHKDVTQNYDYVFWCGDLNFR 346 (459)
Q Consensus 310 ~I~~~l~f~~~~~~~~~~~~~~~~~d~vfw~GDLNyR 346 (459)
.|.+.+.-. ..+ ..+.+|++||||-.
T Consensus 164 ~i~~~i~~~-~~~----------~~~pvIl~GDfN~~ 189 (283)
T TIGR03395 164 EIQDFIDSK-NIP----------KDETVLIGGDLNVN 189 (283)
T ss_pred HHHHHHhhc-cCC----------CCceEEEEeeCCCC
Confidence 998876311 111 12348999999943
No 13
>KOG1976|consensus
Probab=99.04 E-value=8.4e-11 Score=114.15 Aligned_cols=45 Identities=31% Similarity=0.601 Sum_probs=37.7
Q ss_pred CCCC-CcccCcccCCeeeecCCCCcccccccccCcCcchhhhhhcc
Q psy3197 133 VFRG-FEEGPITFPPTFKYDPGTCHFDTSHKQRTPSYTDRILFKSR 177 (459)
Q Consensus 133 ~f~~-f~E~~I~F~PTyK~~~~~~~~~~~~k~R~psw~dRil~~~~ 177 (459)
.|+. ..|..|.|||||+|+.+...-.+.++.|+|+||||||+..+
T Consensus 305 nf~~kl~E~~i~FpPsypysed~~~~E~~m~TrcPAWcDRILmn~~ 350 (391)
T KOG1976|consen 305 NFAFKLKEETIFFPPSYPYSEDDSGKEEFMRTRCPAWCDRILMNDR 350 (391)
T ss_pred HHHHHHhheeecCCCCCCCCcCccchHHHHhccChHhhhhhhcCcc
Confidence 3443 78999999999999987776667888999999999998653
No 14
>PRK05421 hypothetical protein; Provisional
Probab=98.92 E-value=1.6e-08 Score=99.77 Aligned_cols=214 Identities=15% Similarity=0.117 Sum_probs=112.0
Q ss_pred cccCcCcchhhhhhccCCCCCCCCccccccCCCCCCCCCceeeeccCCCCCchhHHHHHHHhhcCCc--eeEEEEeecCc
Q psy3197 162 KQRTPSYTDRILFKSRQRPPGSPLELSSLFLPDSLDHLPDMVVIGTQESYPEREDWEVSIQMTLGHS--FVMLESTTLGT 239 (459)
Q Consensus 162 k~R~psw~dRil~~~~~~~~~s~~dl~s~ll~~~~d~~pd~~vig~QE~~~~~~~w~~~l~~~L~~~--y~~v~s~~l~g 239 (459)
..|+.+||.+-.... .....+. .+ ...|| +||+||...... ...+...++.. |..-....-+.
T Consensus 43 ~lri~t~NI~~~~~~-----~~~~~l~-~l-----~~~~D--iI~LQEv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 107 (263)
T PRK05421 43 RLRLLVWNIYKQQRA-----GWLSVLK-NL-----GKDAD--LVLLQEAQTTPE--LVQFATANYLAADQAPAFVLPQHP 107 (263)
T ss_pred ceeEEEEEccccccc-----cHHHHHH-Hh-----ccCCC--EEEEEecccCcc--hHHHhhcccchHHhccccccCCCc
Confidence 478899987543211 0111111 11 45677 889999854321 11121222222 21111222345
Q ss_pred eeEEEEEecccccccCCCccccceeeeeeec-ccCceEEEeeeE-cCeEEEEEeccccccchhHHHHHHHHHHHHHhcCC
Q psy3197 240 LHLAVYVRRHLIWFCSEPEEADYSVRAGSAF-RTKGAVAIGFTL-FGSSFLFVTSHLTAHEERVKDRIDDVRRIVKSLDL 317 (459)
Q Consensus 240 i~l~Vfvr~~~~~~is~v~~~~~~~g~G~~~-gNKGaV~i~~~i-~~~s~~FVn~HLaA~~~~~~~Rn~d~~~I~~~l~f 317 (459)
-++++++|.++...... ... .... --||++.+.+.+ .+..+.++|+||.+.....+.|..++..|.+.+.-
T Consensus 108 ~GvaiLSR~pi~~~~~~-~~~------~~~~~~~r~~l~a~~~~~~g~~l~v~ntHl~~~~~~~~~r~~q~~~l~~~~~~ 180 (263)
T PRK05421 108 SGVMTLSKAHPVYCCPL-RER------EPWLRLPKSALITEYPLPNGRTLLVVNIHAINFSLGVDVYSKQLEPIGDQIAH 180 (263)
T ss_pred cceeEeeecccceeecc-CCC------CccccCcceeEEEEEEeCCCCEEEEEEECccccCcChHHHHHHHHHHHHHHHh
Confidence 67899999876542111 000 0011 138999999988 56679999999987644557788999888886621
Q ss_pred CCCCCCCCCCCCcccCceeEEEeccccccccCChhHHHHHHhcCCCCCCCCCCCCccchhHHHH--HcCCCccCCcceEe
Q psy3197 318 PKELPCKHRHKDVTQNYDYVFWCGDLNFRVTQPRDDVIHWFKQQTFPLPPTMPMQLDCQLNKSL--SEGSVFRGGEIQCL 395 (459)
Q Consensus 318 ~~~~~~~~~~~~~~~~~d~vfw~GDLNyRi~~~~~~v~~~i~~~~~~~~~~~~ll~~DQL~~~~--~~g~~~~~~~i~~~ 395 (459)
. ...++++||||=.-....+....+.+....... .+ ..+.-...+ .=.-+|. ..+.+.
T Consensus 181 ---~------------~~p~Il~GDFN~~~~~~~~~l~~~~~~~~l~~~-~~---~~~~~~~~~~~~ID~I~~-~~~~v~ 240 (263)
T PRK05421 181 ---H------------SGPVILAGDFNTWSRKRMNALKRFARELGLKEV-RF---TDDQRRRAFGRPLDFVFY-RGLNVS 240 (263)
T ss_pred ---C------------CCCEEEEcccccCcccchHHHHHHHHHcCCCcc-Cc---CCcccccccCCCcceEEE-CCcEEE
Confidence 0 123889999992111111233333433222110 00 001100000 0011143 235666
Q ss_pred eccccCCCCccCCcceeceEEeE
Q psy3197 396 HYSSVPSICSSDHKPVWGLYKCS 418 (459)
Q Consensus 396 ~Y~s~~~i~~SDHkPV~a~f~v~ 418 (459)
++... ....|||+||.|.|++.
T Consensus 241 ~~~v~-~~~~SDH~Pv~a~l~l~ 262 (263)
T PRK05421 241 KASVL-VTRASDHNPLLVEFSLK 262 (263)
T ss_pred EEEcC-CCCCCCccCEEEEEEec
Confidence 66665 45799999999999864
No 15
>KOG1976|consensus
Probab=98.84 E-value=1.5e-09 Score=105.57 Aligned_cols=69 Identities=30% Similarity=0.467 Sum_probs=55.4
Q ss_pred ecccCceEEEeeeEcCeEEEEEeccccccchhH-----------HHHHHHHHHHHHhcCCCCCCCCCCCCCCcccCceeE
Q psy3197 269 AFRTKGAVAIGFTLFGSSFLFVTSHLTAHEERV-----------KDRIDDVRRIVKSLDLPKELPCKHRHKDVTQNYDYV 337 (459)
Q Consensus 269 ~~gNKGaV~i~~~i~~~s~~FVn~HLaA~~~~~-----------~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~d~v 337 (459)
.|+.||-.-.+++|.+..|.|||.||-...+++ ..|-+++..++.++.-+. ...|.+
T Consensus 153 ~~~rkg~~~~r~~I~~k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~~------------~~~~~~ 220 (391)
T KOG1976|consen 153 ANQRKGFLLARFRIHGKEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEEG------------LRNDAI 220 (391)
T ss_pred hhhhccccceeEEEcCceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhhc------------cCceEE
Confidence 468899999999999999999999996655544 348888888888883221 234679
Q ss_pred EEeccccccccC
Q psy3197 338 FWCGDLNFRVTQ 349 (459)
Q Consensus 338 fw~GDLNyRi~~ 349 (459)
|+|||||||++.
T Consensus 221 fVfGdfNfrLds 232 (391)
T KOG1976|consen 221 FVFGDFNFRLDS 232 (391)
T ss_pred EEecccccccch
Confidence 999999999984
No 16
>PRK11756 exonuclease III; Provisional
Probab=98.52 E-value=3.9e-07 Score=89.83 Aligned_cols=124 Identities=15% Similarity=0.171 Sum_probs=68.7
Q ss_pred CCCCceeeeccCCCCCchhHHHHHHHhhcCCceeEEEEeecCceeEEEEEecccccccCCCccccceeeeee--ecccCc
Q psy3197 197 DHLPDMVVIGTQESYPEREDWEVSIQMTLGHSFVMLESTTLGTLHLAVYVRRHLIWFCSEPEEADYSVRAGS--AFRTKG 274 (459)
Q Consensus 197 d~~pd~~vig~QE~~~~~~~w~~~l~~~L~~~y~~v~s~~l~gi~l~Vfvr~~~~~~is~v~~~~~~~g~G~--~~gNKG 274 (459)
...|| ||||||.......+...+.+.++. ......+-+.-+++|++|.++..... ++.+ .-...+
T Consensus 24 ~~~pD--Ii~LQE~~~~~~~~~~~~~~~~gy--~~~~~~~~~~~GvailSr~p~~~~~~---------~~~~~~~~~~~r 90 (268)
T PRK11756 24 KHQPD--VIGLQETKVHDEMFPLEEVEALGY--HVFYHGQKGHYGVALLSKQTPIAVRK---------GFPTDDEEAQRR 90 (268)
T ss_pred hcCCC--EEEEEecccccccCCHHHHHhcCC--EEEEeCCCCCCEEEEEECCChHHeEE---------CCCCccccccCC
Confidence 45688 789999743221111111223443 22223344556788999987642211 1111 112457
Q ss_pred eEEEeeeEcCeEEEEEeccccccc-----hhHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccCceeEEEeccccc
Q psy3197 275 AVAIGFTLFGSSFLFVTSHLTAHE-----ERVKDRIDDVRRIVKSLDLPKELPCKHRHKDVTQNYDYVFWCGDLNF 345 (459)
Q Consensus 275 aV~i~~~i~~~s~~FVn~HLaA~~-----~~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~d~vfw~GDLNy 345 (459)
.+.+.+...+..+.++|+|++.+. .+.+.|.+.+..+...+.-.. .....+|++||||-
T Consensus 91 ~l~~~i~~~~g~~~v~n~y~P~~~~~~~~~~~~~r~~~~~~l~~~l~~~~------------~~~~pvIl~GDfN~ 154 (268)
T PRK11756 91 IIMATIPTPNGNLTVINGYFPQGESRDHPTKFPAKRQFYQDLQNYLETEL------------SPDNPLLIMGDMNI 154 (268)
T ss_pred EEEEEEEcCCCCEEEEEEEecCCCCCCcchhHHHHHHHHHHHHHHHHHHh------------ccCCCEEEEeeccc
Confidence 888888876666999999998653 233345555555554441000 01123899999994
No 17
>KOG0565|consensus
Probab=98.46 E-value=1.4e-07 Score=84.64 Aligned_cols=75 Identities=25% Similarity=0.451 Sum_probs=49.0
Q ss_pred EEEEeecCCccc-----ccceeeeehhhhhhhHH---H-------HHHHHhhhccccc------ccc-cCcceEEEeccc
Q psy3197 33 YVGTWNMNGQAE-----QQSMLCLVLQSWTRHYL---T-------EIFISMYLEYERT------NVT-QNYDYVFWCGDL 90 (459)
Q Consensus 33 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~------~~~-~~~d~vfw~GDl 90 (459)
..|+++++|+.. .++..||++||++++.- + +++. ..++... ..+ ..+|.|||+|||
T Consensus 40 ~~~~~~nkg~v~is~~~~~~~~~~v~~hl~~~~~~~~~~r~~d~~~i~~--~~~~~~~~~~~~~~~~~~~~D~v~w~GDl 117 (145)
T KOG0565|consen 40 IMGYLGNKGGVAISFVLSQTSFCFVISHLTSGVHKVYERRNEDYQEILN--GLRFPSVSPASEPVISDGEHDTVIWLGDL 117 (145)
T ss_pred EEEEeCCCCeEEEEEEEcCceEEEEEecccccchhhHHHhhccHHHHHh--hccccccCcccccccccccccEEEEecce
Confidence 567788999988 36899999999997331 1 2332 2222211 112 227999999999
Q ss_pred cccccCC-hhhHHHHHhcCC
Q psy3197 91 NFRVTQP-RDDVIHWFKQQT 109 (459)
Q Consensus 91 NfRi~~~-~~~~~~~i~~~~ 109 (459)
|||+..+ ...+...+....
T Consensus 118 N~Rl~~~~~~~~~~~~~~~~ 137 (145)
T KOG0565|consen 118 NYRLSGPSYLEVRTLISVKS 137 (145)
T ss_pred eeeecCcccccchhhhhhcc
Confidence 9999987 444444444443
No 18
>PTZ00297 pantothenate kinase; Provisional
Probab=98.16 E-value=1.1e-05 Score=95.71 Aligned_cols=168 Identities=15% Similarity=0.141 Sum_probs=85.6
Q ss_pred ccccCcCcchhhhhhccCCCCCCCCccccccCCCCCC-CCCceeeeccCCCCCchh-HH--------HHHHHhhc---CC
Q psy3197 161 HKQRTPSYTDRILFKSRQRPPGSPLELSSLFLPDSLD-HLPDMVVIGTQESYPERE-DW--------EVSIQMTL---GH 227 (459)
Q Consensus 161 ~k~R~psw~dRil~~~~~~~~~s~~dl~s~ll~~~~d-~~pd~~vig~QE~~~~~~-~w--------~~~l~~~L---~~ 227 (459)
...|+.+||.+.|...... -....+..++. . ..|| ||||||+..... .| .+.+.+.+ +.
T Consensus 9 ~~l~VlTyNv~~~~~~~~~--~~~~ri~~~i~----~l~~~D--Iv~lQEvf~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 80 (1452)
T PTZ00297 9 AQARVLSYNFNILPRGCGG--FQHERIETFLA----SVDAYD--VVLLQEVYAASVLPYFLQKQLCFQKMLVDELKARGF 80 (1452)
T ss_pred CceEEEEEEccccCCCccc--ccHHHHHHHHH----hccCCC--EEEEecccccccccccccccchhhHHHHHHHHhcCC
Confidence 3588999997666422111 11233333332 2 2567 889999865321 12 22223322 43
Q ss_pred ceeEEEEe----e------cCceeEEEEEecccccccCCCccccceeeeeeecccCceEEEeeeEc----C-eEEEEEec
Q psy3197 228 SFVMLEST----T------LGTLHLAVYVRRHLIWFCSEPEEADYSVRAGSAFRTKGAVAIGFTLF----G-SSFLFVTS 292 (459)
Q Consensus 228 ~y~~v~s~----~------l~gi~l~Vfvr~~~~~~is~v~~~~~~~g~G~~~gNKGaV~i~~~i~----~-~s~~FVn~ 292 (459)
.|..+... . ...-+++|.+|.++...-...... .+.+-...+||.+.+.+.+. + ..+.++|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~G~AILSR~PI~~~~~~~l~~---~~~~~~~~~RG~L~a~I~vp~~~g~~~~v~v~~t 157 (1452)
T PTZ00297 81 HHYVISKQPSYLTMLRYNVCSDNGLIIASRFPIWQRGSYTFRN---HERGEQSVRRGCLFAEVEVPLAEGGSQRIVFFNV 157 (1452)
T ss_pred ceeEeecCccccccccCccccCCEEEEEECCChhhceeeecCc---ccccccccccceEEEEEEccccCCCCceEEEEEe
Confidence 34332111 1 245688999999986442211110 01112235899999999984 2 57999999
Q ss_pred cccccchhHHHHHHHHHHHHHhcCCC-CCCCCCCCCCCcccCceeEEEecccc
Q psy3197 293 HLTAHEERVKDRIDDVRRIVKSLDLP-KELPCKHRHKDVTQNYDYVFWCGDLN 344 (459)
Q Consensus 293 HLaA~~~~~~~Rn~d~~~I~~~l~f~-~~~~~~~~~~~~~~~~d~vfw~GDLN 344 (459)
||.+.... ..|.+|.+.+.+.+.-. +.. ..+ . ......-+|++||||
T Consensus 158 HL~~~~~~-~~R~~Q~~ql~~~i~~~i~~~-~~~--~-~~~~~~PvILaGDFN 205 (1452)
T PTZ00297 158 HLRQEDSL-PSTSSQVQETRRFVESVIANV-YEQ--N-NDGAEIPFVIAGDFN 205 (1452)
T ss_pred CCCCCCCc-chHHHHHHHHHHHHHHhhhhh-ccc--c-cCCCCCCEEEEeeCC
Confidence 99987442 22444444444332100 000 000 0 000123489999999
No 19
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=98.11 E-value=6.5e-06 Score=77.34 Aligned_cols=134 Identities=19% Similarity=0.197 Sum_probs=67.5
Q ss_pred CCCceeeeccCCCCCc--hhHHHHHHHhhcCCceeEEEEeec-----CceeEEEEEecccccccCCCccccceee---ee
Q psy3197 198 HLPDMVVIGTQESYPE--REDWEVSIQMTLGHSFVMLESTTL-----GTLHLAVYVRRHLIWFCSEPEEADYSVR---AG 267 (459)
Q Consensus 198 ~~pd~~vig~QE~~~~--~~~w~~~l~~~L~~~y~~v~s~~l-----~gi~l~Vfvr~~~~~~is~v~~~~~~~g---~G 267 (459)
+.|| ||+|||+... .+.+...+...++. +.......- .+..++|++|.++..............+ ..
T Consensus 28 ~~~D--ii~LQEv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~i~~r~~~~~~~~~~~~~~~~~~~~~~~ 104 (249)
T PF03372_consen 28 LDPD--IIALQEVRNDDLSELLEEQLRGYLGY-YGSFWPGNSPPSDAGGYGVAILSRSPIFSSVSYVFSLFSKPGIRIFR 104 (249)
T ss_dssp HT-S--EEEEEEEESHHHHHHHHHHHHTCTTH-EEEEEETSSSTTCSSSEEEEEEESSCCCEEEEEEEEEESSSTTCEEE
T ss_pred cCCC--EEEEecchhhhhhhhhhhhccccccc-ccceeccccccccccCceEEEEEcccccccccccccccccccccccc
Confidence 4477 7899998642 22233333332221 111111111 4678999999886544322221100000 11
Q ss_pred eecccCceEEEeeeEcCeEEEEEeccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccCceeEEEeccccccc
Q psy3197 268 SAFRTKGAVAIGFTLFGSSFLFVTSHLTAHEERVKDRIDDVRRIVKSLDLPKELPCKHRHKDVTQNYDYVFWCGDLNFRV 347 (459)
Q Consensus 268 ~~~gNKGaV~i~~~i~~~s~~FVn~HLaA~~~~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~d~vfw~GDLNyRi 347 (459)
....+++.+.+++. +..|+++++|+.+.....+.+...+...+..+.-.. ....+|++||||.+.
T Consensus 105 ~~~~~~~~~~~~~~--~~~i~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~iv~GDfN~~~ 169 (249)
T PF03372_consen 105 RSSKSKGIVPVSIN--GKPITVVNVHLPSSNDERQEQWRELLARIQKIYADN-------------PNEPVIVMGDFNSRP 169 (249)
T ss_dssp EEEEEEEEEEEEEE--TEEEEEEEEETTSHHHHHHHHHHHHHHHHHHHHHTS-------------SCCEEEEEEE-SS-B
T ss_pred cccccccccccccc--ceEEEeeeccccccchhhhhhhhhhhhhhhhccccc-------------ccceEEEEeecccCC
Confidence 22345666666666 999999999999965443332223333333321100 001488999999776
Q ss_pred cC
Q psy3197 348 TQ 349 (459)
Q Consensus 348 ~~ 349 (459)
+.
T Consensus 170 ~~ 171 (249)
T PF03372_consen 170 DS 171 (249)
T ss_dssp SS
T ss_pred cc
Confidence 53
No 20
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=98.08 E-value=8e-05 Score=81.10 Aligned_cols=150 Identities=17% Similarity=0.194 Sum_probs=85.9
Q ss_pred CCCCceeeeccCCCCCchhHHHHHHHhhcC-CceeEEEEee---------cCceeEEEEEecccccccCCCcc--ccc--
Q psy3197 197 DHLPDMVVIGTQESYPEREDWEVSIQMTLG-HSFVMLESTT---------LGTLHLAVYVRRHLIWFCSEPEE--ADY-- 262 (459)
Q Consensus 197 d~~pd~~vig~QE~~~~~~~w~~~l~~~L~-~~y~~v~s~~---------l~gi~l~Vfvr~~~~~~is~v~~--~~~-- 262 (459)
.++|| |||+||+... .+.+.+...|. .+|.-+.... ..+=+.+||.|++....+..-.. ...
T Consensus 296 ~~~aD--IICLQEV~~~--~~~d~~~p~L~~~GY~Gv~~~Kt~~~~~~~~~~~DGcAIFyr~drFeLv~~~~ief~~~~l 371 (606)
T PLN03144 296 GYRAD--ILCLQEVQSD--HFEEFFAPELDKHGYQALYKKKTTEVYTGNTYVIDGCATFFRRDRFSLVKKYEVEFNKAAQ 371 (606)
T ss_pred hcCCC--EEEEeecCHH--HHHHHHHhhhhhcCceEEEeCCCCccccccccCCceeEEEEECcceEEEEeeeeeccchhh
Confidence 56788 8899998542 23333333332 2454442221 13447899999886554432100 000
Q ss_pred --------eeeeee----ecccCceEEEeeeEc-----------CeEEEEEeccccccchhHHHHHHHHHHHHHhcCCCC
Q psy3197 263 --------SVRAGS----AFRTKGAVAIGFTLF-----------GSSFLFVTSHLTAHEERVKDRIDDVRRIVKSLDLPK 319 (459)
Q Consensus 263 --------~~g~G~----~~gNKGaV~i~~~i~-----------~~s~~FVn~HLaA~~~~~~~Rn~d~~~I~~~l~f~~ 319 (459)
+.+.+. ++.++-|+.+.|... +..|+++|.||..+.....-|..|...|++.+.--.
T Consensus 372 slt~~~~~s~~~~~~l~Rl~kdNVAliv~Le~k~~~~~~~~~~~~~~l~VaNTHL~~~p~~~dvRl~Q~~~Ll~~l~~~~ 451 (606)
T PLN03144 372 SLTEALIPSAQKKAALNRLLKDNVALIVVLEAKFGNQGADNGGKRQLLCVANTHIHANQELKDVKLWQVHTLLKGLEKIA 451 (606)
T ss_pred ccCccccccccchhhhhhhccCcEEEEEEEEEecccccccCCCCccEEEEEEeeeccCCccchhHHHHHHHHHHHHHHHh
Confidence 000111 122234555555542 236999999998776666678888888887762100
Q ss_pred CCCCCCCCCCcccCceeEEEeccccccccCChhHHHHHHhcCCCC
Q psy3197 320 ELPCKHRHKDVTQNYDYVFWCGDLNFRVTQPRDDVIHWFKQQTFP 364 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~d~vfw~GDLNyRi~~~~~~v~~~i~~~~~~ 364 (459)
. ..+ -.+|+||||| ..|.+.+-+++.+|..+
T Consensus 452 ~------~~~-----~PvIlcGDFN---S~P~S~vy~lLt~G~v~ 482 (606)
T PLN03144 452 A------SAD-----IPMLVCGDFN---SVPGSAPHCLLATGKVD 482 (606)
T ss_pred h------cCC-----CceEEeccCC---CCCCChhhhhhhcCCcC
Confidence 0 001 1389999999 88888888888877643
No 21
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.08 E-value=1.7e-05 Score=76.99 Aligned_cols=122 Identities=19% Similarity=0.258 Sum_probs=62.0
Q ss_pred CCCCceeeeccCCCCCchhHHHHHHHhhcCCceeEEEEeecCceeEEEEEecccccccCCCccccceeeeee-ecccCce
Q psy3197 197 DHLPDMVVIGTQESYPEREDWEVSIQMTLGHSFVMLESTTLGTLHLAVYVRRHLIWFCSEPEEADYSVRAGS-AFRTKGA 275 (459)
Q Consensus 197 d~~pd~~vig~QE~~~~~~~w~~~l~~~L~~~y~~v~s~~l~gi~l~Vfvr~~~~~~is~v~~~~~~~g~G~-~~gNKGa 275 (459)
...|| |+++||.......+...+...++..+.......-+.-+++|++|.++..... +++. .....|.
T Consensus 25 ~~~~D--Iv~LQE~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~ailsr~~~~~~~~---------~~~~~~~~~~~r 93 (255)
T TIGR00633 25 EEQPD--VLCLQETKVADEQFPAELFEELGYHVFFHGAKSKGYSGVAILSKVEPLDVRY---------GFGGEEHDEEGR 93 (255)
T ss_pred hcCCC--EEEEEeccCchhhCCHhHhccCCceEEEeecccCCcceEEEEEcCCcceEEE---------CCCCCcccCCCc
Confidence 55688 7799998643211111222333443322222211334578889877542211 1111 0112221
Q ss_pred EEEeeeEcCeEEEEEeccccccc----hhHHHHHHHHHHHHHhcC--CCCCCCCCCCCCCcccCceeEEEecccccc
Q psy3197 276 VAIGFTLFGSSFLFVTSHLTAHE----ERVKDRIDDVRRIVKSLD--LPKELPCKHRHKDVTQNYDYVFWCGDLNFR 346 (459)
Q Consensus 276 V~i~~~i~~~s~~FVn~HLaA~~----~~~~~Rn~d~~~I~~~l~--f~~~~~~~~~~~~~~~~~d~vfw~GDLNyR 346 (459)
.+.+.+ ..+.++++|+++.. ...+.|.+.+..+.+.+. ... ...+|++||||-.
T Consensus 94 -~l~~~~--~~~~i~~vy~p~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~--------------~~~~Il~GDFN~~ 153 (255)
T TIGR00633 94 -VITAEF--DGFTVVNVYVPNGGSRGLERLEYKLQFWDALFQYYEKELDA--------------GKPVIICGDMNVA 153 (255)
T ss_pred -EEEEEE--CCEEEEEEEccCCCCCCchhHHHHHHHHHHHHHHHHHHHhc--------------CCcEEEEeecccC
Confidence 223333 46889999998854 234567667766655431 111 1248999999953
No 22
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=98.08 E-value=1.4e-05 Score=79.33 Aligned_cols=126 Identities=14% Similarity=0.121 Sum_probs=65.5
Q ss_pred cccCcCcchhhhhhccCCCCCCCCccccccCCCCCCCCCceeeeccCCCCCchhHHHHHHHhhc----CCceeEEEEeec
Q psy3197 162 KQRTPSYTDRILFKSRQRPPGSPLELSSLFLPDSLDHLPDMVVIGTQESYPEREDWEVSIQMTL----GHSFVMLESTTL 237 (459)
Q Consensus 162 k~R~psw~dRil~~~~~~~~~s~~dl~s~ll~~~~d~~pd~~vig~QE~~~~~~~w~~~l~~~L----~~~y~~v~s~~l 237 (459)
..|+.|||-|.+.......+....-+... + ..|| ++|+||+..........+...| +..|..+.+...
T Consensus 17 ~l~I~SfNIr~fgd~k~~~~~r~~~i~~i-l-----~~~D--IiglQEV~d~q~~~l~~ll~~Ln~~~~~~Y~~v~s~r~ 88 (276)
T smart00476 17 SLRICAFNIQSFGDSKMSNATLMSIIVKI-L-----SRYD--IALVQEVRDSDLSAVPKLMDQLNSDSPNTYSYVSSEPL 88 (276)
T ss_pred cEEEEEEECcccCCccccHHHHHHHHHHH-h-----ccCC--EEEEEEeecchhHHHHHHHHHHhhcCCCCceEEecCCC
Confidence 47899999986542221100000001111 1 1567 8899999764433333333333 347888876655
Q ss_pred C----ceeEEEEEecccccccCCCcc-ccceeeeeeecccCceEEEeeeEcCe---EEEEEecccccc
Q psy3197 238 G----TLHLAVYVRRHLIWFCSEPEE-ADYSVRAGSAFRTKGAVAIGFTLFGS---SFLFVTSHLTAH 297 (459)
Q Consensus 238 ~----gi~l~Vfvr~~~~~~is~v~~-~~~~~g~G~~~gNKGaV~i~~~i~~~---s~~FVn~HLaA~ 297 (459)
+ +-+.++|-|.+....+..-.- +... |....+ .-=...++|+...+ .|.+||+|+.+.
T Consensus 89 gr~~~~E~~a~~Yr~drv~v~~~~~f~d~~~-~~~~~F-~ReP~~~~F~~~~~~~~~F~li~~H~~p~ 154 (276)
T smart00476 89 GRNSYKEQYLFLYRSDLVSVLDSYLYDDGCE-CGNDVF-SREPFVVKFSSPSTAVKEFVIVPLHTTPE 154 (276)
T ss_pred CCCCCCEEEEEEEecceEEEcccceecCCCC-Cccccc-cccceEEEEEeCCCCCccEEEEEecCChH
Confidence 3 467888888776543221100 0000 111111 12234556665554 799999999885
No 23
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=97.93 E-value=3.9e-05 Score=74.96 Aligned_cols=56 Identities=21% Similarity=0.330 Sum_probs=45.1
Q ss_pred cCceEEEeeeEc-CeEEEEEeccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccCceeEEEecccc
Q psy3197 272 TKGAVAIGFTLF-GSSFLFVTSHLTAHEERVKDRIDDVRRIVKSLDLPKELPCKHRHKDVTQNYDYVFWCGDLN 344 (459)
Q Consensus 272 NKGaV~i~~~i~-~~s~~FVn~HLaA~~~~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~d~vfw~GDLN 344 (459)
-.|++.+.+... +..+.++|.||. -..+.|.+|...|.+.+.++... .+++|||||
T Consensus 118 ~Rgal~a~~~~~~g~~l~V~~~HL~---l~~~~R~~Q~~~L~~~~~l~~~~--------------p~vl~GDFN 174 (259)
T COG3568 118 PRGALLAEIELPGGKPLRVINAHLG---LSEESRLRQAAALLALAGLPALN--------------PTVLMGDFN 174 (259)
T ss_pred CceeEEEEEEcCCCCEEEEEEEecc---ccHHHHHHHHHHHHhhccCcccC--------------ceEEEccCC
Confidence 379999999985 779999999999 34567999999999965554321 488999999
No 24
>KOG3873|consensus
Probab=97.92 E-value=3.6e-05 Score=77.37 Aligned_cols=129 Identities=19% Similarity=0.265 Sum_probs=82.8
Q ss_pred eeccCCCCCchhHHHHHHHhhcC--CceeEEEEeecCceeEEEEEecccccccCCCcc-c--cceeeeeeecccCceEEE
Q psy3197 204 VIGTQESYPEREDWEVSIQMTLG--HSFVMLESTTLGTLHLAVYVRRHLIWFCSEPEE-A--DYSVRAGSAFRTKGAVAI 278 (459)
Q Consensus 204 vig~QE~~~~~~~w~~~l~~~L~--~~y~~v~s~~l~gi~l~Vfvr~~~~~~is~v~~-~--~~~~g~G~~~gNKGaV~i 278 (459)
++++||+-.. +.| +.+++... ..|...--+...|-+|+||+|.++....-...+ . ...+--|--+|-||.--+
T Consensus 44 iv~LQEvWs~-eD~-~~L~~~~ss~yPysh~FHSGimGaGL~vfSK~PI~~t~~~~y~lNG~p~~i~rGDWf~GK~Vgl~ 121 (422)
T KOG3873|consen 44 IVSLQEVWSQ-EDF-EYLQSGCSSVYPYSHYFHSGIMGAGLCVFSKHPILETLFHRYSLNGYPHAIHRGDWFGGKGVGLT 121 (422)
T ss_pred hhhHHHHHHH-HHH-HHHHHhccccCchHHhhhcccccCceEEeecCchhhhhhhccccCCccceeeeccccccceeEEE
Confidence 7799996321 234 34444443 345444333444899999999998643211111 0 011122334577998889
Q ss_pred eeeEcCeEEEEEecccccc-----chhHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccCceeEEEecccccc
Q psy3197 279 GFTLFGSSFLFVTSHLTAH-----EERVKDRIDDVRRIVKSLDLPKELPCKHRHKDVTQNYDYVFWCGDLNFR 346 (459)
Q Consensus 279 ~~~i~~~s~~FVn~HLaA~-----~~~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~d~vfw~GDLNyR 346 (459)
.+.+.+..+.+.|.||-|- +.-+-.|..|..++.+-+.... ...|.||.+||||-+
T Consensus 122 ~l~~~g~~v~~yntHLHAeY~rq~D~YL~HR~~QAwdlaqfi~~t~------------q~~~vVI~~GDLN~~ 182 (422)
T KOG3873|consen 122 VLLVGGRMVNLYNTHLHAEYDRQNDEYLCHRVAQAWDLAQFIRATR------------QNADVVILAGDLNMQ 182 (422)
T ss_pred EEeeCCEEeeeeehhccccccccCchhhhHHHHHHHHHHHHHHHHh------------cCCcEEEEecCCCCC
Confidence 9999999999999999993 2235569888888887663221 235789999999943
No 25
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=97.76 E-value=0.00012 Score=71.85 Aligned_cols=137 Identities=18% Similarity=0.162 Sum_probs=71.5
Q ss_pred cCcCcchhhhhhccCCCCCCCCccccccCCCCCCCCCceeeeccCCCCCchhHHHHHHHhhcCCceeEEE--EeecCcee
Q psy3197 164 RTPSYTDRILFKSRQRPPGSPLELSSLFLPDSLDHLPDMVVIGTQESYPEREDWEVSIQMTLGHSFVMLE--STTLGTLH 241 (459)
Q Consensus 164 R~psw~dRil~~~~~~~~~s~~dl~s~ll~~~~d~~pd~~vig~QE~~~~~~~w~~~l~~~L~~~y~~v~--s~~l~gi~ 241 (459)
|+-+||..-+... ..+.+.+|+. .+.|| |+|+||.-....... .+.. +|.... +.+-+.-+
T Consensus 2 ki~swNVNgir~~------~~~~~~~~l~----~~~~D--IiclQEtK~~~~~~~---~~~~--gY~~~~~~~~~kgy~G 64 (250)
T PRK13911 2 KLISWNVNGLRAC------MTKGFMDFFN----SVDAD--VFCIQESKMQQEQNT---FEFK--GYFDFWNCAIKKGYSG 64 (250)
T ss_pred EEEEEEeCChhHh------hhhhHHHHHH----hcCCC--EEEEEeecccccccc---cccC--CceEEEEecccCccce
Confidence 4556776555321 1124556665 66788 889999754332210 1122 343222 22345558
Q ss_pred EEEEEecccccccCCCccccceeeeeeecccCceEEEeeeEcCeEEEEEeccccccchh---HHHH---HHHHHHHHHhc
Q psy3197 242 LAVYVRRHLIWFCSEPEEADYSVRAGSAFRTKGAVAIGFTLFGSSFLFVTSHLTAHEER---VKDR---IDDVRRIVKSL 315 (459)
Q Consensus 242 l~Vfvr~~~~~~is~v~~~~~~~g~G~~~gNKGaV~i~~~i~~~s~~FVn~HLaA~~~~---~~~R---n~d~~~I~~~l 315 (459)
.++++|.+... +..|+|.----..|-.|...+. .+.++|+..+.+... .+.| ..++...++.+
T Consensus 65 VAi~~k~~~~~---------v~~~~~~~~~d~eGR~I~~~~~--~~~l~nvY~Pn~~~~~~r~~~K~~~~~~~~~~l~~l 133 (250)
T PRK13911 65 VVTFTKKEPLS---------VSYGINIEEHDKEGRVITCEFE--SFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKAL 133 (250)
T ss_pred EEEEEcCCchh---------eEEcCCCCcccccCCEEEEEEC--CEEEEEEEecCCCCCCcchHHHHHHHHHHHHHHHhc
Confidence 89999975321 2233332111112333444443 589999999987533 3333 34455555543
Q ss_pred CCCCCCCCCCCCCCcccCceeEEEecccc
Q psy3197 316 DLPKELPCKHRHKDVTQNYDYVFWCGDLN 344 (459)
Q Consensus 316 ~f~~~~~~~~~~~~~~~~~d~vfw~GDLN 344 (459)
. . ...++|+||||
T Consensus 134 ~--~--------------~~~~Ii~GD~N 146 (250)
T PRK13911 134 E--L--------------KKPVIVCGDLN 146 (250)
T ss_pred c--c--------------CCCEEEEcccc
Confidence 1 1 12488999999
No 26
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=97.47 E-value=0.00037 Score=68.06 Aligned_cols=121 Identities=19% Similarity=0.286 Sum_probs=60.6
Q ss_pred CCCCceeeeccCCCCCchhHHHHHHHhhcCCceeEEEEeecCceeEEEEEecccccccCCCccccceeeeee-ecccCce
Q psy3197 197 DHLPDMVVIGTQESYPEREDWEVSIQMTLGHSFVMLESTTLGTLHLAVYVRRHLIWFCSEPEEADYSVRAGS-AFRTKGA 275 (459)
Q Consensus 197 d~~pd~~vig~QE~~~~~~~w~~~l~~~L~~~y~~v~s~~l~gi~l~Vfvr~~~~~~is~v~~~~~~~g~G~-~~gNKGa 275 (459)
...|| |+|+||.......+...+...++ |....+..-+.-+++|++|...... . .+++. .....|-
T Consensus 24 ~~~~D--Ii~LQE~~~~~~~~~~~~~~~~g--~~~~~~~~~g~~Gvailsr~~~~~~-~--------~~~~~~~~~~~~r 90 (254)
T TIGR00195 24 ENQPD--VLCLQETKVQDEQFPLEPFHKEG--YHVFFSGQKGYSGVAIFSKEEPLSV-R--------RGFGVEEEDAEGR 90 (254)
T ss_pred hcCCC--EEEEEecccchhhCCHHHhhcCC--cEEEEecCCCcceEEEEEcCCcceE-E--------ECCCCcccccCCC
Confidence 45688 77899974432223222223333 3333333334446888888543211 0 01110 0112333
Q ss_pred EEEeeeEcCeEEEEEeccccccc----hhHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccCceeEEEeccccc
Q psy3197 276 VAIGFTLFGSSFLFVTSHLTAHE----ERVKDRIDDVRRIVKSLDLPKELPCKHRHKDVTQNYDYVFWCGDLNF 345 (459)
Q Consensus 276 V~i~~~i~~~s~~FVn~HLaA~~----~~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~d~vfw~GDLNy 345 (459)
+. ...+. .+.++|.|++++. +..+.|.+.+..+.+.+.- .. .....+|++||||-
T Consensus 91 ~i-~~~~~--~~~l~~~~~p~~~~~~~~~~~~r~~~~~~l~~~~~~---~~---------~~~~pvIi~GDfN~ 149 (254)
T TIGR00195 91 II-MAEFD--SFLVINGYFPNGSRDDSEKLPYKLQWLEALQNYLEK---LV---------DKDKPVLICGDMNI 149 (254)
T ss_pred EE-EEEEC--CEEEEEEEccCCCCCCCccHHHHHHHHHHHHHHHHH---HH---------hcCCcEEEEeeccc
Confidence 21 23332 4889999998742 2345566666666665521 00 00123899999993
No 27
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=97.46 E-value=0.00051 Score=67.34 Aligned_cols=93 Identities=15% Similarity=0.143 Sum_probs=52.7
Q ss_pred cccccCCCCCCCCCceeeeccCCCCCchhHHHHHHHhhcCCceeEEEEeecCceeEEEEEecccccccCCCccccceeee
Q psy3197 187 LSSLFLPDSLDHLPDMVVIGTQESYPEREDWEVSIQMTLGHSFVMLESTTLGTLHLAVYVRRHLIWFCSEPEEADYSVRA 266 (459)
Q Consensus 187 l~s~ll~~~~d~~pd~~vig~QE~~~~~~~w~~~l~~~L~~~y~~v~s~~l~gi~l~Vfvr~~~~~~is~v~~~~~~~g~ 266 (459)
+.+|+. .+.|| |+|+||.-.....+-....+.+|+. ....+.+-+.-+.++++|.+.. .+..|+
T Consensus 18 ~~~~l~----~~~pD--VlclQEtK~~~~~fp~~~~~~~GY~-~~~~~gqKgysGVailsr~~~~---------~v~~g~ 81 (261)
T COG0708 18 LLDWLE----EEQPD--VLCLQETKAQDEQFPREELEALGYH-HVFNHGQKGYSGVAILSKKPPD---------DVRRGF 81 (261)
T ss_pred HHHHHH----HhCCC--EEEEEecccCcccCCHhHHhhCCce-EEEecCcCCcceEEEEEccCch---------hhhcCC
Confidence 445554 56787 8899998544332222233344442 2233334555688899987653 234455
Q ss_pred eee---cccCceEEEeeeEcCeEEEEEeccccccch
Q psy3197 267 GSA---FRTKGAVAIGFTLFGSSFLFVTSHLTAHEE 299 (459)
Q Consensus 267 G~~---~gNKGaV~i~~~i~~~s~~FVn~HLaA~~~ 299 (459)
++. -+-+=.|.+. +.+ +.++|.-+++++.
T Consensus 82 ~~~~~~d~e~R~I~a~--~~~--~~v~~~Y~PnG~~ 113 (261)
T COG0708 82 PGEEEDDEEGRVIEAE--FDG--FRVINLYFPNGSS 113 (261)
T ss_pred CCCccccccCcEEEEE--ECC--EEEEEEEcCCCCC
Confidence 542 1122233333 344 8899999999876
No 28
>KOG2338|consensus
Probab=97.26 E-value=0.0011 Score=69.62 Aligned_cols=150 Identities=23% Similarity=0.300 Sum_probs=87.3
Q ss_pred CCCceeeeccCCCCCch--hHHHHHHHhhcCCceeEEEEeecCceeEEEEEecccccccCCCccccceeeeeeeccc--C
Q psy3197 198 HLPDMVVIGTQESYPER--EDWEVSIQMTLGHSFVMLESTTLGTLHLAVYVRRHLIWFCSEPEEADYSVRAGSAFRT--K 273 (459)
Q Consensus 198 ~~pd~~vig~QE~~~~~--~~w~~~l~~~L~~~y~~v~s~~l~gi~l~Vfvr~~~~~~is~v~~~~~~~g~G~~~gN--K 273 (459)
.+|| |+|+||+.... ..|...+.. ||..=..+....-.+=+++|+-+......+..-.....-.+.+.+... +
T Consensus 161 ~dpD--IlCLQEVq~d~~~~~~~~~~~~-lGy~~~~~r~t~~KthG~ai~w~~~~F~lv~~~~l~y~~~~~~l~n~~NV~ 237 (495)
T KOG2338|consen 161 YDPD--VLCLQEVQEDHYPEFWQPLLGK-LGYTGFFKRRTGTKTHGVAILWHSAKFKLVNHSELNYFDSGSALANRDNVG 237 (495)
T ss_pred cCCC--eeeehhhhhhhhHHHHHHHHhh-cCceEEEEeccCCCCceEEEEEecccceecccchhhcccccchhhccccee
Confidence 4677 88999985432 234333332 443222222223345577888777654433222222222222322223 3
Q ss_pred ceEEEeeeEcCe---EEEEEeccccccchhHHHHHHHHHHHHHhcC-CCCCCCCCCCCCCcccCceeEEEeccccccccC
Q psy3197 274 GAVAIGFTLFGS---SFLFVTSHLTAHEERVKDRIDDVRRIVKSLD-LPKELPCKHRHKDVTQNYDYVFWCGDLNFRVTQ 349 (459)
Q Consensus 274 GaV~i~~~i~~~---s~~FVn~HLaA~~~~~~~Rn~d~~~I~~~l~-f~~~~~~~~~~~~~~~~~d~vfw~GDLNyRi~~ 349 (459)
+.|+.+|++-+. .+++.|.||-=|......|..|...|++.+. +.... ..|=.+|+||||| ..
T Consensus 238 lvv~l~f~~~~~~sq~ilVanTHLl~np~~~~vrL~Q~~iiL~~~~~~~~~~----------~~~~pi~l~GDfN---t~ 304 (495)
T KOG2338|consen 238 LVVSLEFRLVDESSQGILVANTHLLFNPSRSDVRLAQVYIILAELEKMSKSS----------KSHWPIFLCGDFN---TE 304 (495)
T ss_pred EEEEEEecccCcccCceEEEeeeeeecCcccchhhHHHHHHHHHHHHHHhhc----------ccCCCeEEecCCC---CC
Confidence 445555555555 8999999999998888899999999999872 11000 0233699999999 77
Q ss_pred ChhHHHHHHhcCCC
Q psy3197 350 PRDDVIHWFKQQTF 363 (459)
Q Consensus 350 ~~~~v~~~i~~~~~ 363 (459)
|.+.+-..|..+.+
T Consensus 305 p~~~~y~fl~~~~l 318 (495)
T KOG2338|consen 305 PDSPPYLFLTSGPL 318 (495)
T ss_pred CCCCcchhhhcCCc
Confidence 76665555554443
No 29
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.17 E-value=0.0029 Score=63.21 Aligned_cols=181 Identities=18% Similarity=0.195 Sum_probs=87.7
Q ss_pred CceeeeccCCCCCchhHHHHHHHhhc--CCceeEEEEeecCceeEEEEEecccccccCCCccccceeeeeeecccCceEE
Q psy3197 200 PDMVVIGTQESYPEREDWEVSIQMTL--GHSFVMLESTTLGTLHLAVYVRRHLIWFCSEPEEADYSVRAGSAFRTKGAVA 277 (459)
Q Consensus 200 pd~~vig~QE~~~~~~~w~~~l~~~L--~~~y~~v~s~~l~gi~l~Vfvr~~~~~~is~v~~~~~~~g~G~~~gNKGaV~ 277 (459)
|| ++-+||.+. .|..... .+ ..+|.....+.-+.+.+.+++|..-.+.... + .. .=+-||+.+
T Consensus 115 ~D--~v~~~E~~~---~~~~~~~-~l~~~yP~~~~~~~~~~~~~~a~~sr~~~~~~~~~-e-~~-------~~~pk~~~~ 179 (309)
T COG3021 115 AD--AVTTPEGVQ---LWTAKVG-ALAAQYPAFILCQHPTGVFTLAILSRRPCCPLTEA-E-PW-------LRLPKSALA 179 (309)
T ss_pred cc--hhhhHHHHH---HhHhHHH-HHHHhCCceeecCCCCCeeeeeecccccccccccc-C-cc-------ccCCcccee
Confidence 66 555677432 3433331 22 2333333333336667777777652221100 0 00 114577777
Q ss_pred Eeee-EcCeEEEEEeccccccch-hHHHHHHHHHHHHHhcCCCCCCCCCCCCCCcccCceeEEEeccccccccCChhHH-
Q psy3197 278 IGFT-LFGSSFLFVTSHLTAHEE-RVKDRIDDVRRIVKSLDLPKELPCKHRHKDVTQNYDYVFWCGDLNFRVTQPRDDV- 354 (459)
Q Consensus 278 i~~~-i~~~s~~FVn~HLaA~~~-~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~d~vfw~GDLNyRi~~~~~~v- 354 (459)
+... .+++.+..++.|..--.. ....| ++...+.+.+.--. . -+++.|||| ..|.+..
T Consensus 180 t~~~~~~g~~l~v~~lh~~~~~~~~~~~~-~ql~~l~~~i~~~~---g------------pvIlaGDfN---a~pWS~~~ 240 (309)
T COG3021 180 TAYPLPDGTELTVVALHAVNFPVGTDPQR-AQLLELGDQIAGHS---G------------PVILAGDFN---APPWSRTA 240 (309)
T ss_pred EEEEcCCCCEEEEEeeccccccCCccHHH-HHHHHHHHHHHcCC---C------------CeEEeecCC---CcchhHHH
Confidence 6665 447899999999884222 22223 56666665551101 1 188999999 7776663
Q ss_pred HHHHhcCC---CCCCCCCC-CCccchhHHHHHcCCC---ccCCcceEeeccccCCCCccCCcceeceEEe
Q psy3197 355 IHWFKQQT---FPLPPTMP-MQLDCQLNKSLSEGSV---FRGGEIQCLHYSSVPSICSSDHKPVWGLYKC 417 (459)
Q Consensus 355 ~~~i~~~~---~~~~~~~~-ll~~DQL~~~~~~g~~---~~~~~i~~~~Y~s~~~i~~SDHkPV~a~f~v 417 (459)
+.+-.-+- ......-+ -...|++.+ +---++ |..+ ++...=...++ +.|||+||.+.|+.
T Consensus 241 ~R~~~l~~~~~~~~aG~~~~~~~p~~~~r-~~g~PIDhvf~rg-l~~~ka~rl~~-~gSDH~PLLveF~~ 307 (309)
T COG3021 241 KRMAALGGLRAAPRAGLWEVRFTPDERRR-AFGLPIDHVFYRG-LTVMKARRLPD-RGSDHRPLLVEFSY 307 (309)
T ss_pred HHHHHhcccccchhccCCccccCHHHHhh-ccCCCcceeeecC-cchhhhhhccc-cCCCCCceEEEEEe
Confidence 22222110 11000000 001244333 000111 3222 33333333344 89999999999985
No 30
>KOG2756|consensus
Probab=97.15 E-value=0.0019 Score=62.78 Aligned_cols=61 Identities=23% Similarity=0.461 Sum_probs=40.7
Q ss_pred EEeeeEcCeEEEEEeccccccchhHHHHHHHHHHHHHhcCCC-CCCCCCCCCCCcccCceeEEEecccccccc
Q psy3197 277 AIGFTLFGSSFLFVTSHLTAHEERVKDRIDDVRRIVKSLDLP-KELPCKHRHKDVTQNYDYVFWCGDLNFRVT 348 (459)
Q Consensus 277 ~i~~~i~~~s~~FVn~HLaA~~~~~~~Rn~d~~~I~~~l~f~-~~~~~~~~~~~~~~~~d~vfw~GDLNyRi~ 348 (459)
.+-..+.|..+||.|+||.+-.+...+|.++|...++.+.-- ...| .-.||+-||+|.|=.
T Consensus 196 I~Ev~v~G~Kl~l~tsHLEStr~h~P~r~~qF~~~~~k~~EaIe~lP-----------nA~ViFGGD~NlrD~ 257 (349)
T KOG2756|consen 196 IVEVNVSGNKLCLMTSHLESTRGHAPERMNQFKMVLKKMQEAIESLP-----------NATVIFGGDTNLRDR 257 (349)
T ss_pred EEEEeecCceEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHhCC-----------CceEEEcCcccchhh
Confidence 344456688899999999998777777777776666554100 0001 123899999999744
No 31
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=95.97 E-value=0.034 Score=54.99 Aligned_cols=85 Identities=19% Similarity=0.189 Sum_probs=51.7
Q ss_pred CceeEEEEEecccccccCCCccccceeeeeeecccCceEEEeeeEcCeEEEEEeccccccchhHHHHHHHHHHHHHhcCC
Q psy3197 238 GTLHLAVYVRRHLIWFCSEPEEADYSVRAGSAFRTKGAVAIGFTLFGSSFLFVTSHLTAHEERVKDRIDDVRRIVKSLDL 317 (459)
Q Consensus 238 ~gi~l~Vfvr~~~~~~is~v~~~~~~~g~G~~~gNKGaV~i~~~i~~~s~~FVn~HLaA~~~~~~~Rn~d~~~I~~~l~f 317 (459)
+-..++|.+|.+.......... .......+++++. + +.|.+.|+.|..+ .+|.+.++.|.....
T Consensus 116 gr~glAIlSr~~a~~~~~l~~p---------~~~~Rpilgi~i~--~--~~ffstH~~a~~~--~da~aiV~~I~~~f~- 179 (271)
T PRK15251 116 NRVNLAIVSRRRADEVIVLRPP---------TVASRPIIGIRIG--N--DVFFSIHALANGG--TDAGAIVRAVHNFFR- 179 (271)
T ss_pred CceeEEEEecccccceEEecCC---------CCcccceEEEEec--C--eEEEEeeecCCCC--ccHHHHHHHHHHHHh-
Confidence 4568888888775322111100 1124667788763 3 7899999999843 347788888877652
Q ss_pred CCCCCCCCCCCCcccCceeEEEeccccccccCChhH
Q psy3197 318 PKELPCKHRHKDVTQNYDYVFWCGDLNFRVTQPRDD 353 (459)
Q Consensus 318 ~~~~~~~~~~~~~~~~~d~vfw~GDLNyRi~~~~~~ 353 (459)
+ ..+ +.-.+++|||| ..|.+.
T Consensus 180 ~-~~~-----------~~pw~I~GDFN---r~P~sl 200 (271)
T PRK15251 180 P-NMR-----------HINWMIAGDFN---RSPDRL 200 (271)
T ss_pred h-ccC-----------CCCEEEeccCC---CCCcch
Confidence 0 111 12278999999 555544
No 32
>COG2374 Predicted extracellular nuclease [General function prediction only]
Probab=63.51 E-value=23 Score=39.83 Aligned_cols=63 Identities=21% Similarity=0.370 Sum_probs=39.5
Q ss_pred CeEEEEEecccccc-------------chh-HHHHHHHHHHHHHhcCC-CCCCCCCCCCCCcccCceeEEEecccccccc
Q psy3197 284 GSSFLFVTSHLTAH-------------EER-VKDRIDDVRRIVKSLDL-PKELPCKHRHKDVTQNYDYVFWCGDLNFRVT 348 (459)
Q Consensus 284 ~~s~~FVn~HLaA~-------------~~~-~~~Rn~d~~~I~~~l~f-~~~~~~~~~~~~~~~~~d~vfw~GDLNyRi~ 348 (459)
+..|..|.-||.+. |.+ ...|.++...+...+.- +.. + .+. .++.+|||| +
T Consensus 620 ~ekfvvVvNHfkSKgs~~p~~gd~~dgQg~~~~~R~~~AqaL~~~la~~~~~---~-------~d~-~~viLGD~N---~ 685 (798)
T COG2374 620 GEKFVVVVNHFKSKGSDCPVDGDTQDGQGNSNQTRVRAAQALAAFLATNPTG---K-------ADA-DIVILGDFN---D 685 (798)
T ss_pred CcEEEEEEeeecccCCCCCCcccccccccchhhHHHHHHHHHHHHHhhCccc---c-------cCC-CEEEEeccc---h
Confidence 35588888899873 222 35588888888887732 111 0 112 366999999 5
Q ss_pred CChhHHHHHHhc
Q psy3197 349 QPRDDVIHWFKQ 360 (459)
Q Consensus 349 ~~~~~v~~~i~~ 360 (459)
-..+++.+.|+.
T Consensus 686 y~~edpI~~l~~ 697 (798)
T COG2374 686 YAFEDPIQALEG 697 (798)
T ss_pred hhhccHHHHHhh
Confidence 555566666665
No 33
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=51.83 E-value=12 Score=34.40 Aligned_cols=14 Identities=36% Similarity=0.363 Sum_probs=10.6
Q ss_pred eEEEeccccccccC
Q psy3197 83 YVFWCGDLNFRVTQ 96 (459)
Q Consensus 83 ~vfw~GDlNfRi~~ 96 (459)
.++++||||.+.+.
T Consensus 158 ~~iv~GDfN~~~~~ 171 (249)
T PF03372_consen 158 PVIVMGDFNSRPDS 171 (249)
T ss_dssp EEEEEEE-SS-BSS
T ss_pred eEEEEeecccCCcc
Confidence 79999999998874
No 34
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=48.28 E-value=47 Score=33.10 Aligned_cols=14 Identities=36% Similarity=0.416 Sum_probs=11.4
Q ss_pred cceEEEeccccccc
Q psy3197 81 YDYVFWCGDLNFRV 94 (459)
Q Consensus 81 ~d~vfw~GDlNfRi 94 (459)
.+.+|++||||..=
T Consensus 177 ~~pvIl~GDfN~~~ 190 (283)
T TIGR03395 177 DETVLIGGDLNVNK 190 (283)
T ss_pred CceEEEEeeCCCCC
Confidence 46799999999754
No 35
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=38.25 E-value=47 Score=27.41 Aligned_cols=11 Identities=27% Similarity=0.383 Sum_probs=6.1
Q ss_pred eEEEecccccc
Q psy3197 336 YVFWCGDLNFR 346 (459)
Q Consensus 336 ~vfw~GDLNyR 346 (459)
.++++||||-.
T Consensus 32 ~~Ii~GDFN~~ 42 (119)
T PF14529_consen 32 PIIIGGDFNAH 42 (119)
T ss_dssp SEEEEEE----
T ss_pred CEEEEeECCCC
Confidence 48899999964
No 36
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]
Probab=37.73 E-value=44 Score=34.51 Aligned_cols=44 Identities=18% Similarity=0.224 Sum_probs=25.4
Q ss_pred cCceEEEeeeEcCeE----EEEEeccccccchhHHHHHHHHHHHHHhc
Q psy3197 272 TKGAVAIGFTLFGSS----FLFVTSHLTAHEERVKDRIDDVRRIVKSL 315 (459)
Q Consensus 272 NKGaV~i~~~i~~~s----~~FVn~HLaA~~~~~~~Rn~d~~~I~~~l 315 (459)
+.-|++|.++....+ +..-+.|+-.|.--..+|.++-...++++
T Consensus 121 ~~dGc~if~k~~~~~sk~~li~~~~~~f~~p~~~~er~r~t~~~lnri 168 (378)
T COG5239 121 KVDGCAIFLKRFIDSSKLGLILAVTHLFWHPYGYYERFRQTYILLNRI 168 (378)
T ss_pred ccceEEEEEEeccccchhhhhhhhhHhhcccceeehhhhHHHHHHHHH
Confidence 445677777763221 23334555556555566777766666665
No 37
>KOG3870|consensus
Probab=36.19 E-value=14 Score=38.43 Aligned_cols=16 Identities=44% Similarity=0.719 Sum_probs=13.7
Q ss_pred cCceeEEEeccccccc
Q psy3197 332 QNYDYVFWCGDLNFRV 347 (459)
Q Consensus 332 ~~~d~vfw~GDLNyRi 347 (459)
...+.||+-||||||=
T Consensus 350 ~~S~LvIFKGDLNYRK 365 (434)
T KOG3870|consen 350 QKSSLVIFKGDLNYRK 365 (434)
T ss_pred hhCcEEEEeccccHHH
Confidence 4578899999999984
No 38
>KOG2756|consensus
Probab=29.16 E-value=66 Score=32.09 Aligned_cols=65 Identities=28% Similarity=0.381 Sum_probs=36.8
Q ss_pred hcCCC----CceeEEEEEeecCCcccccceeeeehhhhhh---hHHHH--HHHHhhhccccc-ccccCcceEEEeccccc
Q psy3197 23 KALPN----RDIHIYVGTWNMNGQAEQQSMLCLVLQSWTR---HYLTE--IFISMYLEYERT-NVTQNYDYVFWCGDLNF 92 (459)
Q Consensus 23 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~-~~~~~~d~vfw~GDlNf 92 (459)
+.||| |++.| .-.+..|.+ +||.+.||+. |-=+| .|. +.+...+. --+.+--.||+-||+|.
T Consensus 183 i~F~NS~M~R~L~I--~Ev~v~G~K-----l~l~tsHLEStr~h~P~r~~qF~-~~~~k~~EaIe~lPnA~ViFGGD~Nl 254 (349)
T KOG2756|consen 183 IPFPNSKMMRNLLI--VEVNVSGNK-----LCLMTSHLESTRGHAPERMNQFK-MVLKKMQEAIESLPNATVIFGGDTNL 254 (349)
T ss_pred eccCcchhhheeEE--EEEeecCce-----EEEEeccccCCCCCChHHHHHHH-HHHHHHHHHHHhCCCceEEEcCcccc
Confidence 45676 44444 334555655 8999999993 22222 232 22221111 01236678999999999
Q ss_pred ccc
Q psy3197 93 RVT 95 (459)
Q Consensus 93 Ri~ 95 (459)
|=.
T Consensus 255 rD~ 257 (349)
T KOG2756|consen 255 RDR 257 (349)
T ss_pred hhh
Confidence 755
No 39
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=27.88 E-value=55 Score=32.37 Aligned_cols=42 Identities=12% Similarity=0.000 Sum_probs=21.0
Q ss_pred eeeeehhhhhhhHHHHHHHHhhhcccccccccCcceEEEecccc
Q psy3197 48 MLCLVLQSWTRHYLTEIFISMYLEYERTNVTQNYDYVFWCGDLN 91 (459)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vfw~GDlN 91 (459)
.+.+++-||.-.--+|..+...|.. ... ....-.+++|||||
T Consensus 133 ~l~V~~~HL~l~~~~R~~Q~~~L~~-~~~-l~~~~p~vl~GDFN 174 (259)
T COG3568 133 PLRVINAHLGLSEESRLRQAAALLA-LAG-LPALNPTVLMGDFN 174 (259)
T ss_pred EEEEEEEeccccHHHHHHHHHHHHh-hcc-CcccCceEEEccCC
Confidence 3456666776211233333333332 111 11222899999999
No 40
>KOG3870|consensus
Probab=26.10 E-value=28 Score=36.35 Aligned_cols=18 Identities=39% Similarity=0.562 Sum_probs=15.0
Q ss_pred cccCcceEEEeccccccc
Q psy3197 77 VTQNYDYVFWCGDLNFRV 94 (459)
Q Consensus 77 ~~~~~d~vfw~GDlNfRi 94 (459)
-...++.||+=||||||=
T Consensus 348 ~L~~S~LvIFKGDLNYRK 365 (434)
T KOG3870|consen 348 DLQKSSLVIFKGDLNYRK 365 (434)
T ss_pred HHhhCcEEEEeccccHHH
Confidence 356789999999999983
No 41
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=23.87 E-value=54 Score=32.72 Aligned_cols=45 Identities=20% Similarity=0.230 Sum_probs=24.3
Q ss_pred eeeeehhhhhhhHHHH-HH--HHhhhcccccccccCcceEEEecccccccc
Q psy3197 48 MLCLVLQSWTRHYLTE-IF--ISMYLEYERTNVTQNYDYVFWCGDLNFRVT 95 (459)
Q Consensus 48 ~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~d~vfw~GDlNfRi~ 95 (459)
.+++++.|+.+..-.+ +- ....++..+. . ..+-|+++||||=-.+
T Consensus 143 ~F~li~~H~~p~~~~~e~~aL~~v~~~~~~~--~-~~~~villGDFNa~~~ 190 (276)
T smart00476 143 EFVIVPLHTTPEAAVAEIDALYDVYLDVRQK--W-GTEDVIFMGDFNAGCS 190 (276)
T ss_pred cEEEEEecCChHHHHHHHHHHHHHHHHHHHh--h-ccCCEEEEccCCCCCC
Confidence 4789999998754222 10 0111111110 0 2366899999997543
No 42
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=23.72 E-value=72 Score=30.11 Aligned_cols=27 Identities=30% Similarity=0.311 Sum_probs=20.7
Q ss_pred hhhHHHHHHHHhhhcccccccccCcceEEEeccc
Q psy3197 57 TRHYLTEIFISMYLEYERTNVTQNYDYVFWCGDL 90 (459)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vfw~GDl 90 (459)
...||.|+|+.+-..... |+|+++|||
T Consensus 28 ~D~YL~~~~~~~~~~l~P-------d~V~fLGDL 54 (193)
T cd08164 28 NDYFLGHIVSMMQFWLKP-------DAVVVLGDL 54 (193)
T ss_pred hHHHHHHHHHHHHHhcCC-------CEEEEeccc
Confidence 468888888766554433 899999999
No 43
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=20.81 E-value=74 Score=35.41 Aligned_cols=26 Identities=19% Similarity=0.258 Sum_probs=18.7
Q ss_pred ceEEEeccccccccCChhhHHHHHhcCCC
Q psy3197 82 DYVFWCGDLNFRVTQPRDDVIHWFKQQTF 110 (459)
Q Consensus 82 d~vfw~GDlNfRi~~~~~~~~~~i~~~~~ 110 (459)
-.++++||||- .+.+.+.+++.++..
T Consensus 456 ~PvIlcGDFNS---~P~S~vy~lLt~G~v 481 (606)
T PLN03144 456 IPMLVCGDFNS---VPGSAPHCLLATGKV 481 (606)
T ss_pred CceEEeccCCC---CCCChhhhhhhcCCc
Confidence 36899999995 445667777776653
Done!