BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy320
(202 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 2 HTNYATNLIKTLIEIQ-KHPSDK----LMKLLDHFQVTGINGTHVCTVTEIMAECLCNYM 56
+T A + I+ L ++ P+D +++LLD F+++G+NGTH+C V E++ L ++
Sbjct: 76 YTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWI 135
Query: 57 IRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQ 116
I+ +Q PL K I+ Q+L+GL++LHTK ++HT IKPE+I + YI L +
Sbjct: 136 IKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL--AAE 193
Query: 117 ATTHQECHDQQSSSKTKS 134
AT Q S S
Sbjct: 194 ATEWQRSGAPPPSGSAVS 211
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 24 LMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHL 83
+++LLD F+++G+NGTH+C V E++ L ++I+ +Q PL K I+ Q+L+GL++L
Sbjct: 87 VVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYL 146
Query: 84 HTKHNLVHTSIKPESIFFKADHVYIMTLINIQQATTHQECHDQQSSSKTKS 134
HTK ++HT IKPE+I + YI L +AT Q S S
Sbjct: 147 HTKCRIIHTDIKPENILLSVNEQYIRRL--AAEATEWQRSGAPPPSGSAVS 195
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 22 DKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLN 81
D +++L+D F+++G+NG HVC V E++ L ++I+ +Q P+ K I+ Q+L+GL+
Sbjct: 95 DMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLD 154
Query: 82 HLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQATTHQECHDQQSSSKTKS 134
+LH+K ++HT IKPE+I D Y+ + +AT Q+ S S
Sbjct: 155 YLHSKCKIIHTDIKPENILMCVDDAYVRRM--AAEATEWQKAGAPPPSGSAVS 205
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%)
Query: 21 SDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGL 80
++ ++KLLDHF G NG HV V E++ E L + + + + PL+ K I Q+L GL
Sbjct: 85 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 144
Query: 81 NHLHTKHNLVHTSIKPESIFFK 102
+++H + ++HT IKPE++ +
Sbjct: 145 DYMHRRCGIIHTDIKPENVLME 166
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%)
Query: 21 SDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGL 80
++ ++KLLDHF G NG HV V E++ E L + + + + PL+ K I Q+L GL
Sbjct: 85 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 144
Query: 81 NHLHTKHNLVHTSIKPESIFFK 102
+++H + ++HT IKPE++ +
Sbjct: 145 DYMHRRCGIIHTDIKPENVLME 166
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 19 HPSDKLMKLLDHFQVTGINGTHVCTVTEIM--AECLCNYMIRQKFQPAPLVVAKIIVNQI 76
HP+ +MKL + F+ + + V E+ E ++RQKF V A +I+ Q+
Sbjct: 63 HPN--IMKLYEFFE----DKRNYYLVMEVYRGGELFDEIILRQKFSE---VDAAVIMKQV 113
Query: 77 LEGLNHLHTKHNLVHTSIKPESIFFKA 103
L G +LH KHN+VH +KPE++ ++
Sbjct: 114 LSGTTYLH-KHNIVHRDLKPENLLLES 139
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 19 HPSDKLMKLLDHFQVTGINGTHVCTVTEIM--AECLCNYMIRQKFQPAPLVVAKIIVNQI 76
HP+ +MKL + F+ + + V E+ E ++RQKF V A +I+ Q+
Sbjct: 80 HPN--IMKLYEFFE----DKRNYYLVMEVYRGGELFDEIILRQKFSE---VDAAVIMKQV 130
Query: 77 LEGLNHLHTKHNLVHTSIKPESIFFKA 103
L G +LH KHN+VH +KPE++ ++
Sbjct: 131 LSGTTYLH-KHNIVHRDLKPENLLLES 156
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 8 NLIKTLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLV 67
N++K + E K + + D F G H+C E++ + ++ FQP PL
Sbjct: 77 NVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPYPLP 132
Query: 68 VAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFF 101
+ + Q+ L LH ++ L HT +KPE+I F
Sbjct: 133 HVRHMAYQLCHALRFLH-ENQLTHTDLKPENILF 165
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 8 NLIKTLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLV 67
N++K + E K + + D F G H+C E++ + ++ FQP PL
Sbjct: 100 NVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPYPLP 155
Query: 68 VAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFF 101
+ + Q+ L LH ++ L HT +KPE+I F
Sbjct: 156 HVRHMAYQLCHALRFLH-ENQLTHTDLKPENILF 188
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 8 NLIKTLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLV 67
N++K + E K + + D F G H+C E++ + ++ FQP PL
Sbjct: 68 NVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPYPLP 123
Query: 68 VAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFF 101
+ + Q+ L LH ++ L HT +KPE+I F
Sbjct: 124 HVRHMAYQLCHALRFLH-ENQLTHTDLKPENILF 156
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIM--AECLCNYMIRQKFQPAPLVVA 69
++++ HP+ +MKL D F+ + + V E E + R KF V A
Sbjct: 88 AVLKLLDHPN--IMKLYDFFE----DKRNYYLVMECYKGGELFDEIIHRMKFNE---VDA 138
Query: 70 KIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
+I+ Q+L G+ +LH KHN+VH +KPE++ ++
Sbjct: 139 AVIIKQVLSGVTYLH-KHNIVHRDLKPENLLLES 171
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 16/106 (15%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIM--AECLCNYMIRQKFQPAPLVVA 69
+L++ HP+ ++KL D F+ + + VTE E + R KF A
Sbjct: 98 SLLKSLDHPN--IIKLFDVFE----DKKYFYLVTEFYEGGELFEQIINRHKFDECD---A 148
Query: 70 KIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQ 115
I+ QIL G+ +LH KHN+VH IKPE+I + + +L+NI+
Sbjct: 149 ANIMKQILSGICYLH-KHNIVHRDIKPENILLENKN----SLLNIK 189
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 6 ATNLIKTLIEIQKHPSDKLMK---LLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQ 62
A I+ L ++K D M +L++F H+C E+++ L + + KFQ
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENFTFR----NHICMTFELLSMNLYELIKKNKFQ 195
Query: 63 PAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFK 102
L + + + IL+ L+ LH K+ ++H +KPE+I K
Sbjct: 196 GFSLPLVRKFAHSILQCLDALH-KNRIIHCDLKPENILLK 234
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 6 ATNLIKTLIEIQKHPSDKLMK---LLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQ 62
A I+ L ++K D M +L++F H+C E+++ L + + KFQ
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENFTFR----NHICMTFELLSMNLYELIKKNKFQ 195
Query: 63 PAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFK 102
L + + + IL+ L+ LH K+ ++H +KPE+I K
Sbjct: 196 GFSLPLVRKFAHSILQCLDALH-KNRIIHCDLKPENILLK 234
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 6 ATNLIKTLIEIQKHPSDKLMK---LLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQ 62
A I+ L ++K D M +L++F H+C E+++ L + + KFQ
Sbjct: 140 AAEEIRILEHLRKQDKDNTMNVIHMLENFTFR----NHICMTFELLSMNLYELIKKNKFQ 195
Query: 63 PAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFK 102
L + + + IL+ L+ LH K+ ++H +KPE+I K
Sbjct: 196 GFSLPLVRKFAHSILQCLDALH-KNRIIHCDLKPENILLK 234
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 23 KLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNH 82
+ +++L+ F+ G H+C V E++ +++ F P L + + QI + +N
Sbjct: 78 RCVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 83 LHTKHNLVHTSIKPESIFF 101
LH+ + L HT +KPE+I F
Sbjct: 134 LHS-NKLTHTDLKPENILF 151
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 23 KLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNH 82
+ +++L+ F+ G H+C V E++ +++ F P L + + QI + +N
Sbjct: 78 RCVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 83 LHTKHNLVHTSIKPESIFF 101
LH+ + L HT +KPE+I F
Sbjct: 134 LHS-NKLTHTDLKPENILF 151
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 19 HPSDKLMKLLDHFQVTGINGTHVCTVTEIM--AECLCNYMIRQKFQPAPLVVAKIIVNQI 76
HP+ +MKL + F+ G + V E+ E + R++F V A I+ Q+
Sbjct: 108 HPN--IMKLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSE---VDAARIIRQV 158
Query: 77 LEGLNHLHTKHNLVHTSIKPESIFFKA 103
L G+ ++H K+ +VH +KPE++ ++
Sbjct: 159 LSGITYMH-KNKIVHRDLKPENLLLES 184
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 19 HPSDKLMKLLDHFQVTGINGTHVCTVTEIM--AECLCNYMIRQKFQPAPLVVAKIIVNQI 76
HP+ +MKL + F+ G + V E+ E + R++F V A I+ Q+
Sbjct: 85 HPN--IMKLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSE---VDAARIIRQV 135
Query: 77 LEGLNHLHTKHNLVHTSIKPESIFFKA 103
L G+ ++H K+ +VH +KPE++ ++
Sbjct: 136 LSGITYMH-KNKIVHRDLKPENLLLES 161
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 19 HPSDKLMKLLDHFQVTGINGTHVCTVTEIM--AECLCNYMIRQKFQPAPLVVAKIIVNQI 76
HP+ +MKL + F+ G + V E+ E + R++F V A I+ Q+
Sbjct: 109 HPN--IMKLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSE---VDAARIIRQV 159
Query: 77 LEGLNHLHTKHNLVHTSIKPESIFFKA 103
L G+ ++H K+ +VH +KPE++ ++
Sbjct: 160 LSGITYMH-KNKIVHRDLKPENLLLES 185
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
Query: 23 KLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVV------------AK 70
+L+K LDH ++ + EI+ + Y++ + + L A
Sbjct: 73 ELLKKLDH--------PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124
Query: 71 IIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
I+ Q+ G+ ++H KHN+VH +KPE+I ++
Sbjct: 125 RIIKQVFSGITYMH-KHNIVHRDLKPENILLES 156
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 19 HPSDKLMKLLDHFQVTGINGTHVCTVTEIM--AECLCNYMIRQKFQPAPLVVAKIIVNQI 76
HP+ +MKL + F+ G + V E+ E + R++F V A I+ Q+
Sbjct: 91 HPN--IMKLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSE---VDAARIIRQV 141
Query: 77 LEGLNHLHTKHNLVHTSIKPESIFFKA 103
L G+ ++H K+ +VH +KPE++ ++
Sbjct: 142 LSGITYMH-KNKIVHRDLKPENLLLES 167
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 17 QKHPSDKLM--KLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVN 74
+K P +K + ++ D F G H+C E++ +++ + P P+ + +
Sbjct: 89 EKDPDNKNLCVQMFDWFDYHG----HMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAF 144
Query: 75 QILEGLNHLHTKHNLVHTSIKPESIFF 101
Q+ + + LH + L HT +KPE+I F
Sbjct: 145 QLCQAVKFLHD-NKLTHTDLKPENILF 170
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
Query: 23 KLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVV------------AK 70
+L+K LDH ++ + EI+ + Y++ + + L A
Sbjct: 73 ELLKKLDH--------PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124
Query: 71 IIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
I+ Q+ G+ ++H KHN+VH +KPE+I ++
Sbjct: 125 RIIKQVFSGITYMH-KHNIVHRDLKPENILLES 156
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
Query: 23 KLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVV------------AK 70
+L+K LDH ++ + EI+ + Y++ + + L A
Sbjct: 73 ELLKKLDH--------PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124
Query: 71 IIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
I+ Q+ G+ ++H KHN+VH +KPE+I ++
Sbjct: 125 RIIKQVFSGITYMH-KHNIVHRDLKPENILLES 156
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 40 HVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESI 99
H+C + E + L + R + + K+ +IL+ LN+L K +L HT +KPE+I
Sbjct: 110 HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR-KMSLTHTDLKPENI 168
Query: 100 FFKADHVYIMTLINIQQATTHQECHDQQSSS 130
D + +LI +++ T ++ ++ S
Sbjct: 169 LLD-DPYFEKSLITVRRVTDGKKIQIYRTKS 198
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 52/102 (50%), Gaps = 17/102 (16%)
Query: 23 KLMKLLDH------FQVTGINGTHVCTVTEIMAECLCNYMIRQK--------FQPAPLVV 68
K+++ LDH F++ G +G+ + + E Y++++ + PL+
Sbjct: 60 KIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE 119
Query: 69 --AKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYI 108
A++ + Q+L GL ++H+ N++H +KP ++F + + +
Sbjct: 120 EHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVL 160
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 54 NYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLIN 113
NY I F+ A L K ++ Q+ GL ++H+ +LVH IKP +IF ++ +
Sbjct: 105 NYRIMSYFKEAEL---KDLLLQVGRGLRYIHSM-SLVHMDIKPSNIF--------ISRTS 152
Query: 114 IQQATTHQECHDQQSSSKTKSKI 136
I A + + D +S+K KI
Sbjct: 153 IPNAASEEGDEDDWASNKVMFKI 175
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 54 NYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLIN 113
NY I F+ A L K ++ Q+ GL ++H+ +LVH IKP +IF ++ +
Sbjct: 103 NYRIMSYFKEAEL---KDLLLQVGRGLRYIHSM-SLVHMDIKPSNIF--------ISRTS 150
Query: 114 IQQATTHQECHDQQSSSKTKSKI 136
I A + + D +S+K KI
Sbjct: 151 IPNAASEEGDEDDWASNKVMFKI 173
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 54 NYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLIN 113
NY I F+ A L K ++ Q+ GL ++H+ +LVH IKP +IF ++ +
Sbjct: 103 NYRIMSYFKEAEL---KDLLLQVGRGLRYIHSM-SLVHMDIKPSNIF--------ISRTS 150
Query: 114 IQQATTHQECHDQQSSSKTKSKI 136
I A + + D +S+K KI
Sbjct: 151 IPNAASEEGDEDDWASNKVMFKI 173
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 54 NYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLIN 113
NY I F+ A L K ++ Q+ GL ++H+ +LVH IKP +IF ++ +
Sbjct: 101 NYRIMSYFKEAEL---KDLLLQVGRGLRYIHSM-SLVHMDIKPSNIF--------ISRTS 148
Query: 114 IQQATTHQECHDQQSSSKTKSKI 136
I A + + D +S+K KI
Sbjct: 149 IPNAASEEGDEDDWASNKVMFKI 171
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.9 bits (76), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 19 HPSDKLMKLLDHFQVTGINGTHVCTVTEIM--AECLCNYMIRQKFQPAPLVVAKIIVNQI 76
HP+ + KL + F+ G + V E+ E + R++F V A I+ Q+
Sbjct: 85 HPN--IXKLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSE---VDAARIIRQV 135
Query: 77 LEGLNHLHTKHNLVHTSIKPESIFFKA 103
L G+ + H K+ +VH +KPE++ ++
Sbjct: 136 LSGITYXH-KNKIVHRDLKPENLLLES 161
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
++QILE +NH+H +H++VH +KPE++ +
Sbjct: 136 IHQILESVNHIH-QHDIVHRDLKPENLLLAS 165
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESI 99
A + QIL+G+N+LHTK + H +KPE+I
Sbjct: 117 ATSFIKQILDGVNYLHTK-KIAHFDLKPENI 146
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESI 99
A + QIL+G+N+LHTK + H +KPE+I
Sbjct: 117 ATSFIKQILDGVNYLHTK-KIAHFDLKPENI 146
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESI 99
A + QIL+G+N+LHTK + H +KPE+I
Sbjct: 117 ATSFIKQILDGVNYLHTK-KIAHFDLKPENI 146
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESI 99
A + QIL+G+N+LHTK + H +KPE+I
Sbjct: 117 ATSFIKQILDGVNYLHTK-KIAHFDLKPENI 146
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESI 99
A + QIL+G+N+LHTK + H +KPE+I
Sbjct: 117 ATSFIKQILDGVNYLHTK-KIAHFDLKPENI 146
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESI 99
A + QIL+G+N+LHTK + H +KPE+I
Sbjct: 117 ATSFIKQILDGVNYLHTK-KIAHFDLKPENI 146
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQAT 118
+ Q EGL H+H +H++VH IKPE+I + + +I+ AT
Sbjct: 155 MRQACEGLKHMH-EHSIVHLDIKPENIMCETKKASSVKIIDFGLAT 199
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
++ KI V+ I++ L HLH+K +++H +KP ++ A
Sbjct: 154 ILGKIAVS-IVKALEHLHSKLSVIHRDVKPSNVLINA 189
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
++ KI V+ I++ L HLH+K +++H +KP ++ A
Sbjct: 110 ILGKIAVS-IVKALEHLHSKLSVIHRDVKPSNVLINA 145
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 36 INGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIK 95
I T V E+M C R + P P + + I++ L +L KH ++H +K
Sbjct: 94 ITNTDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVK 152
Query: 96 PESIFF 101
P +I
Sbjct: 153 PSNILL 158
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHV 106
I QI E + LH+K L+H +KP +IFF D V
Sbjct: 123 IFLQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDV 156
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
++ QILEG+ +LH ++N+VH +KP++I +
Sbjct: 136 LIKQILEGVYYLH-QNNIVHLDLKPQNILLSS 166
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Query: 19 HPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILE 78
HP+ ++KLLD F ++ + E A + ++ + +P +++ Q L+
Sbjct: 66 HPN--IVKLLDAFYYE----NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 119
Query: 79 GLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQATTHQECHDQQSSSKTKSKIFC 138
LN+LH + ++H +K +I F D + + T + S T +
Sbjct: 120 ALNYLH-DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 139 EILEQCRLNQDFRLDPRVDPTSIKMYTTFCEILE 172
E++ C ++D D + D S+ + T E+ E
Sbjct: 179 EVV-MCETSKDRPYDYKADVWSLGI--TLIEMAE 209
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHV 106
I QI E + LH+K L+H +KP +IFF D V
Sbjct: 169 IFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDV 202
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
++ KI V+ I++ L HLH+K +++H +KP ++ A
Sbjct: 137 ILGKIAVS-IVKALEHLHSKLSVIHRDVKPSNVLINA 172
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
V+Q+ E L LH+ HN+ H I+PE+I ++ + +I QA
Sbjct: 108 VHQVCEALQFLHS-HNIGHFDIRPENIIYQTRRSSTIKIIEFGQA 151
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L ++M PL + K
Sbjct: 54 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKDFMDASALTGIPLPLIKS 107
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KPE++ + + + +A
Sbjct: 108 YLFQLLQGLAFCHS-HRVLHRDLKPENLLINTEGAIKLADFGLARA 152
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 14 IEIQKHPSDKLMKLLDHFQVTGING-THVCTVTEIMAECLCNYMIRQKFQPAPLVVAKII 72
+E +HP+ +++L D V+ + T + V E + + L Y+ + P K +
Sbjct: 68 LETFEHPN--VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIF 100
+ Q+L GL+ LH+ H +VH +KP++I
Sbjct: 126 MFQLLRGLDFLHS-HRVVHRDLKPQNIL 152
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 14 IEIQKHPSDKLMKLLDHFQVTGING-THVCTVTEIMAECLCNYMIRQKFQPAPLVVAKII 72
+E +HP+ +++L D V+ + T + V E + + L Y+ + P K +
Sbjct: 68 LETFEHPN--VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIF 100
+ Q+L GL+ LH+ H +VH +KP++I
Sbjct: 126 MFQLLRGLDFLHS-HRVVHRDLKPQNIL 152
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 14 IEIQKHPSDKLMKLLDHFQVTGING-THVCTVTEIMAECLCNYMIRQKFQPAPLVVAKII 72
+E +HP+ +++L D V+ + T + V E + + L Y+ + P K +
Sbjct: 68 LETFEHPN--VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIF 100
+ Q+L GL+ LH+ H +VH +KP++I
Sbjct: 126 MFQLLRGLDFLHS-HRVVHRDLKPQNIL 152
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 40 HVCTVTEIMAECLCNYMIRQKFQP----------APLVVAKII--VNQILEGLNHLHTKH 87
++ ++ ++ E C Y++ + + PL V I NQIL+G+ H H
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR 131
Query: 88 NLVHTSIKPESIFFKAD 104
+VH IKP++I ++
Sbjct: 132 -IVHRDIKPQNILIDSN 147
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 18 KHPSDKLMKLLDHFQVTGINGTHVCTVTEIM-AECLCNYMIRQKFQPAPLVVAKIIVNQI 76
+HP+ +++ D ++ T + VTE+ + L Y+ R F+ + V + QI
Sbjct: 83 QHPN--IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR--FKVXKIKVLRSWCRQI 138
Query: 77 LEGLNHLHTKH-NLVHTSIKPESIF 100
L+GL LHT+ ++H +K ++IF
Sbjct: 139 LKGLQFLHTRTPPIIHRDLKCDNIF 163
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E ++ L +M PL + K
Sbjct: 55 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKS 108
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KPE++ + + + +A
Sbjct: 109 YLFQLLQGLAFCHS-HRVLHRDLKPENLLINTEGAIKLADFGLARA 153
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E ++ L +M PL + K
Sbjct: 57 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKS 110
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KPE++ + + + +A
Sbjct: 111 YLFQLLQGLAFCHS-HRVLHRDLKPENLLINTEGAIKLADFGLARA 155
>pdb|2H1R|A Chain A, Crystal Structure Of A Dimethyladenosine Transferase From
Plasmodium Falciparum
pdb|2H1R|B Chain B, Crystal Structure Of A Dimethyladenosine Transferase From
Plasmodium Falciparum
Length = 299
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 167 FCEILEQCRLNHQDFRPDPRVDPTSIKM 194
FC++ + C +N F P P+VD +K+
Sbjct: 167 FCKVTKVCNVNRSSFNPPPKVDSVIVKL 194
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 65 PLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESI 99
P+ V K I+ +L +++H + N+ H +KP +I
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNI 183
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 55 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 108
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KPE++ + + + +A
Sbjct: 109 YLFQLLQGLAFCHS-HRVLHRDLKPENLLINTEGAIKLADFGLARA 153
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 56 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 109
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KPE++ + + + +A
Sbjct: 110 YLFQLLQGLAFCHS-HRVLHRDLKPENLLINTEGAIKLADFGLARA 154
>pdb|1L2L|A Chain A, Crystal Structure Of Adp-Dependent Glucokinase From A
Pyrococcus Horikoshii
Length = 457
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 23 KLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILE-GLN 81
+++KLL HF G+N + +V +M E I K P+ V + ++ I E G+
Sbjct: 281 EIVKLLKHFYSVGLNEVELASVVSVMGEKELAERIISKDPADPIAVIEGLLKLIKETGVK 340
Query: 82 HLH 84
+H
Sbjct: 341 RIH 343
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 70 KIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
KI + Q+L G+ H H +H ++H +KP+++ +D + + +A
Sbjct: 122 KIYLYQLLRGVAHCH-QHRILHRDLKPQNLLINSDGALKLADFGLARA 168
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 70 KIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
KI + Q+L G+ H H +H ++H +KP+++ +D + + +A
Sbjct: 122 KIYLYQLLRGVAHCH-QHRILHRDLKPQNLLINSDGALKLADFGLARA 168
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 75 QILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
QI+ GL HLH + N+++ +KPE++ D
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDD 325
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 75 QILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
QI+ GL HLH + N+++ +KPE++ D
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDD 325
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 75 QILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
QI+ GL HLH + N+++ +KPE++ D
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDD 325
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 75 QILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
QI+ GL HLH + N+++ +KPE++ D
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDD 325
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 30.0 bits (66), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E ++ L ++M PL + K
Sbjct: 56 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLSMDLKDFMDASALTGIPLPLIKS 109
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 110 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 154
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 30.0 bits (66), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLXGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 124 LLYQMLXGIKHLHSA-GIIHRDLKPSNIVVKSD 155
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLXGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E ++ L ++M PL + K
Sbjct: 57 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLSMDLKDFMDASALTGIPLPLIKS 110
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 111 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 155
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 54 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 107
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL+ H+ H ++H +KP+++ + + + +A
Sbjct: 108 YLFQLLQGLSFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 16 IQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQ 75
++ + SD ++ ++ F ++G +C EI+ ++ + VA + Q
Sbjct: 92 LETYSSDGMLYMVFEF----MDGADLCF--EIVKRADAGFVYSE-------AVASHYMRQ 138
Query: 76 ILEGLNHLHTKHNLVHTSIKPESIFFKA 103
ILE L + H +N++H +KPE++ +
Sbjct: 139 ILEALRYCHD-NNIIHRDVKPENVLLAS 165
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINI 114
+ Q+ +GL H+H ++N VH +KPE+I F + LI+
Sbjct: 261 MRQVCKGLCHMH-ENNYVHLDLKPENIMFTTKRSNELKLIDF 301
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
+ Q LEGL +LHT+ ++H +K +++ +D
Sbjct: 156 LGQALEGLEYLHTR-RILHGDVKADNVLLSSD 186
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINI 114
+ Q+ +GL H+H ++N VH +KPE+I F + LI+
Sbjct: 155 MRQVCKGLCHMH-ENNYVHLDLKPENIMFTTKRSNELKLIDF 195
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
+ Q LEGL +LHT+ ++H +K +++ +D
Sbjct: 172 LGQALEGLEYLHTR-RILHGDVKADNVLLSSD 202
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
+ Q LEGL +LHT+ ++H +K +++ +D
Sbjct: 170 LGQALEGLEYLHTR-RILHGDVKADNVLLSSD 200
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 29 DHFQVTGINGTHVC-TVTEIMAECLCNYMIRQKFQPAPLVVAKI--IVNQILEGLNHLHT 85
D VT G+++ T I+ E L +P PL +I I+ +IL+GL++LH+
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 86 KHNLVHTSIKPESIFF 101
+ +H IK ++
Sbjct: 123 EKK-IHRDIKAANVLL 137
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 29 DHFQVTGINGTHVC-TVTEIMAECLCNYMIRQKFQPAPLVVAKI--IVNQILEGLNHLHT 85
D VT G+++ T I+ E L +P PL +I I+ +IL+GL++LH+
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 86 KHNLVHTSIKPESIFF 101
+ +H IK ++
Sbjct: 123 EKK-IHRDIKAANVLL 137
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFF 101
V QILE + +LH ++ +VH +KPE++ +
Sbjct: 154 VKQILEAVAYLH-ENGIVHRDLKPENLLY 181
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 29 DHFQVTGINGTHVC-TVTEIMAECLCNYMIRQKFQPAPLVVAKI--IVNQILEGLNHLHT 85
D VT G+++ T I+ E L +P PL +I I+ +IL+GL++LH+
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 137
Query: 86 KHNLVHTSIKPESIFF 101
+ +H IK ++
Sbjct: 138 EKK-IHRDIKAANVLL 152
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 29 DHFQVTGINGTHVC-TVTEIMAECLCNYMIRQKFQPAPLVVAKI--IVNQILEGLNHLHT 85
D VT G+++ T I+ E L +P PL +I I+ +IL+GL++LH+
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 142
Query: 86 KHNLVHTSIKPESIFF 101
+ +H IK ++
Sbjct: 143 EKK-IHRDIKAANVLL 157
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
++ + QIL G+++ H +H +VH +KPE++ A
Sbjct: 118 SRRLFQQILSGVDYCH-RHMVVHRDLKPENVLLDA 151
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLVGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 58 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 111
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 112 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 156
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLVGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 54 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 107
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 108 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLVGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 54 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 107
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 108 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 55 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 108
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 109 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 153
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 53 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 106
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 107 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 151
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 54 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 107
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 108 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 61 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 114
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 115 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 159
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKXQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 54 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 107
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 108 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 57 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 110
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 111 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 155
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V V E + + L Y+ + P K ++ Q L GL+ LH + +VH +KPE+I
Sbjct: 86 VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENIL 144
Query: 101 FKADHVYIMTLINIQQATTHQECHD 125
+ + + + ++Q D
Sbjct: 145 VTSGGTVKLADFGLARIYSYQMALD 169
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 55 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 108
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 109 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 153
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 53 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 106
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 107 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 151
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 57 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 110
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 111 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 155
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 56 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 109
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 110 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 154
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 54 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 107
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 108 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 53 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 106
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 107 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 151
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 54 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 107
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 108 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKSQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 54 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 107
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 108 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 53 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 106
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 107 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 53 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 106
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 107 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 151
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESIFF 101
A +++ Q+L + +LH ++ +VH +KPE++ +
Sbjct: 108 ASLVIQQVLSAVKYLH-ENGIVHRDLKPENLLY 139
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 55 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 108
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 109 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 153
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 58 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 111
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 112 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 156
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 56 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 109
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 110 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 154
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKXQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 57 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKTFMDASALTGIPLPLIKS 110
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 111 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 155
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 61 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 114
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 115 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 159
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 12 TLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKI 71
+L++ HP+ ++KLLD + V E + + L +M PL + K
Sbjct: 54 SLLKELNHPN--IVKLLDVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKS 107
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQA 117
+ Q+L+GL H+ H ++H +KP+++ + + + +A
Sbjct: 108 YLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLARA 152
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFK 102
++ Q++ L + H++H +VH +KPE+I F+
Sbjct: 129 LMKQMMNALAYFHSQH-VVHKDLKPENILFQ 158
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 75 QILEGLNHLHTKHNLVHTSIKPESIF 100
QI+ G+ H+ HN++H IKPE+I
Sbjct: 132 QIINGIGFCHS-HNIIHRDIKPENIL 156
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQATTHQECHDQQSSSK 131
I+ ++LEGL +LH K+ +H +K +I D + + + K
Sbjct: 121 ILREVLEGLEYLH-KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 179
Query: 132 TKSKIFC----EILEQCRLNQDFRLD 153
T C E++EQ R DF+ D
Sbjct: 180 TFVGTPCWMAPEVMEQVR-GYDFKAD 204
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 136 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 167
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 169 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 200
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 132 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 163
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 125 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 156
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 124 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 155
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 125 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 156
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 129 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 160
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 125 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 156
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
+ QILE +NH H + +VH +KPE++ +
Sbjct: 109 IQQILESVNHCHL-NGIVHRDLKPENLLLAS 138
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 132 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 163
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 19 HPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILE 78
HP+ ++KLLD F ++ + E A + ++ + +P +++ Q L+
Sbjct: 93 HPN--IVKLLDAFYYE----NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 79 GLNHLHTKHNLVHTSIKPESIFFKAD 104
LN+LH + ++H +K +I F D
Sbjct: 147 ALNYLH-DNKIIHRDLKAGNILFTLD 171
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 130 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 161
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
+ QILE +NH H + +VH +KPE++ +
Sbjct: 109 IQQILESVNHCHL-NGIVHRDLKPENLLLAS 138
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 64 APLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
P + K I Q L+ +N H KHN +H +KPE+I
Sbjct: 99 VPEHLVKSITWQTLQAVNFCH-KHNCIHRDVKPENIL 134
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 169 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 200
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 19 HPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILE 78
HP+ ++KLLD F ++ + E A + ++ + +P +++ Q L+
Sbjct: 93 HPN--IVKLLDAFYYE----NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 79 GLNHLHTKHNLVHTSIKPESIFFKAD 104
LN+LH + ++H +K +I F D
Sbjct: 147 ALNYLH-DNKIIHRDLKAGNILFTLD 171
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 132 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 163
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFF 101
I +IL GL+HLH +H ++H IK +++
Sbjct: 134 ICREILRGLSHLH-QHKVIHRDIKGQNVLL 162
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 19 HPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILE 78
HP+ ++KLLD F ++ + E A + ++ + +P +++ Q L+
Sbjct: 93 HPN--IVKLLDAFYYE----NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 79 GLNHLHTKHNLVHTSIKPESIFFKAD 104
LN+LH + ++H +K +I F D
Sbjct: 147 ALNYLH-DNKIIHRDLKAGNILFTLD 171
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESI 99
+ QIL+G+++LH+K + H +KPE+I
Sbjct: 134 FLKQILDGVHYLHSKR-IAHFDLKPENI 160
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 133 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 164
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V V E + + L Y+ + P K ++ Q L GL+ LH + +VH +KPE+I
Sbjct: 86 VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENIL 144
Query: 101 FKADHVYIMTLINIQQATTHQ 121
+ + + + ++Q
Sbjct: 145 VTSGGTVKLADFGLARIYSYQ 165
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESI 99
+ QIL+G+++LH+K + H +KPE+I
Sbjct: 120 FLKQILDGVHYLHSKR-IAHFDLKPENI 146
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTLINIQQATTHQECHDQQSSSK 131
I+ ++LEGL +LH K+ +H +K +I D + + + K
Sbjct: 126 ILREVLEGLEYLH-KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 132 TKSKIFC----EILEQCRLNQDFRLD 153
T C E++EQ R DF+ D
Sbjct: 185 TFVGTPCWMAPEVMEQVR-GYDFKAD 209
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESI 99
+ QIL+G+++LH+K + H +KPE+I
Sbjct: 113 FLKQILDGVHYLHSKR-IAHFDLKPENI 139
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V V E + + L Y+ + P K ++ Q L GL+ LH + +VH +KPE+I
Sbjct: 86 VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENIL 144
Query: 101 FKADHVYIMTLINIQQATTHQ 121
+ + + + ++Q
Sbjct: 145 VTSGGTVKLADFGLARIYSYQ 165
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V V E + + L Y+ + P K ++ Q L GL+ LH + +VH +KPE+I
Sbjct: 94 VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENIL 152
Query: 101 FKADHVYIMTLINIQQATTHQ 121
+ + + + ++Q
Sbjct: 153 VTSGGTVKLADFGLARIYSYQ 173
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
++ K+ + +L GL +L KH ++H +KP +I
Sbjct: 115 ILGKVSI-AVLRGLAYLREKHQIMHRDVKPSNIL 147
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|2FK6|A Chain A, Crystal Structure Of Rnase ZTRNA(THR) COMPLEX
Length = 320
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Query: 85 TKHNLVHTSIKP---ESIF---FKADHVYIMTLINIQQATTHQECHDQQSSSKTKS-KIF 137
T+H ++HT+IKP E IF DHVY L + + + Q D+ + K K F
Sbjct: 42 TQHQMLHTTIKPRKIEKIFITHMAGDHVY--GLPGLLGSRSFQGGEDELTVYGPKGIKAF 99
Query: 138 CE 139
E
Sbjct: 100 IE 101
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
+ Q LEGL +LH++ ++H +K +++ +D
Sbjct: 172 LGQALEGLEYLHSR-RILHGDVKADNVLLSSD 202
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 72 IVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
++ Q+L G+ HLH+ ++H +KP +I K+D
Sbjct: 131 LLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD 162
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 73 VNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
+ Q LEGL +LH++ ++H +K +++ +D
Sbjct: 191 LGQALEGLEYLHSR-RILHGDVKADNVLLSSD 221
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
++ K+ + +++GL +L KH ++H +KP +I
Sbjct: 167 ILGKVSI-AVIKGLTYLREKHKIMHRDVKPSNIL 199
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
++ K+ + +++GL +L KH ++H +KP +I
Sbjct: 132 ILGKVSI-AVIKGLTYLREKHKIMHRDVKPSNIL 164
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
++ K+ + +++GL +L KH ++H +KP +I
Sbjct: 105 ILGKVSI-AVIKGLTYLREKHKIMHRDVKPSNIL 137
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
++ K+ + +++GL +L KH ++H +KP +I
Sbjct: 105 ILGKVSI-AVIKGLTYLREKHKIMHRDVKPSNIL 137
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 7 TNLIKTLIEIQKHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPL 66
TN + ++ I HP ++++ FQ + + + + + ++R K Q P
Sbjct: 53 TNDERLMLSIVTHPF--IIRMWGTFQ----DAQQIFMIMDYIEGGELFSLLR-KSQRFPN 105
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFF-KADHVYI 108
VAK ++ L +LH+K ++++ +KPE+I K H+ I
Sbjct: 106 PVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKI 147
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
++ K+ + +++GL +L KH ++H +KP +I
Sbjct: 105 ILGKVSI-AVIKGLTYLREKHKIMHRDVKPSNIL 137
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
++ K+ + +++GL +L KH ++H +KP +I
Sbjct: 105 ILGKVSI-AVIKGLTYLREKHKIMHRDVKPSNIL 137
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 76 ILEGLNHLHTKHNLVHTSIKPESIF 100
+++GL +L KH ++H +KP +I
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNIL 156
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
++ K+ + +++GL +L KH ++H +KP +I
Sbjct: 105 ILGKVSI-AVIKGLTYLREKHKIMHRDVKPSNIL 137
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 67 VVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
++ K+ + +++GL +L KH ++H +KP +I
Sbjct: 108 ILGKVSI-AVIKGLTYLREKHKIMHRDVKPSNIL 140
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 18 KHPSDKLMKLLDHFQVTGINGTHVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQIL 77
KHPS +++L ++F+ + +V V E+ N ++ + +P A+ ++QI+
Sbjct: 69 KHPS--ILELYNYFE----DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122
Query: 78 EGLNHLHTKHNLVHTSI 94
G+ +LH+ H ++H +
Sbjct: 123 TGMLYLHS-HGILHRDL 138
>pdb|4GCW|A Chain A, Crystal Structure Of Rnase Z In Complex With Precursor
Trna(Thr)
Length = 320
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Query: 85 TKHNLVHTSIKP---ESIFFK---ADHVYIMTLINIQQATTHQECHDQQSSSKTKS-KIF 137
T+H ++HT+IKP E IF DHVY L + + + Q D+ + K K F
Sbjct: 42 TQHQMLHTTIKPRKIEKIFITHMHGDHVY--GLPGLLGSRSFQGGEDELTVYGPKGIKAF 99
Query: 138 CE 139
E
Sbjct: 100 IE 101
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 163
Query: 101 FKAD 104
D
Sbjct: 164 VNED 167
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 163
Query: 101 FKAD 104
D
Sbjct: 164 VNED 167
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 27.3 bits (59), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 70 KIIVNQILEGLNHLHTKHNLVHTSIKPESIFF 101
+ I+ +LE ++ LH +N+VH +KPE+I
Sbjct: 203 RSIMRSLLEAVSFLHA-NNIVHRDLKPENILL 233
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 162
Query: 101 FKAD 104
D
Sbjct: 163 VNED 166
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 163
Query: 101 FKAD 104
D
Sbjct: 164 VNED 167
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 125 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 180
Query: 101 FKAD 104
D
Sbjct: 181 VNED 184
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 112 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 167
Query: 101 FKAD 104
D
Sbjct: 168 VNED 171
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 162
Query: 101 FKAD 104
D
Sbjct: 163 VNED 166
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 162
Query: 101 FKAD 104
D
Sbjct: 163 VNED 166
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 113 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 168
Query: 101 FKAD 104
D
Sbjct: 169 VNED 172
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 159
Query: 101 FKAD 104
D
Sbjct: 160 VNED 163
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 163
Query: 101 FKAD 104
D
Sbjct: 164 VNED 167
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 159
Query: 101 FKAD 104
D
Sbjct: 160 VNED 163
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 100 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 155
Query: 101 FKAD 104
D
Sbjct: 156 VNED 159
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 99 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 154
Query: 101 FKAD 104
D
Sbjct: 155 VNED 158
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 114 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 169
Query: 101 FKAD 104
D
Sbjct: 170 VNED 173
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 122 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 177
Query: 101 FKAD 104
D
Sbjct: 178 VNED 181
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 114 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 169
Query: 101 FKAD 104
D
Sbjct: 170 VNED 173
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 121 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 176
Query: 101 FKAD 104
D
Sbjct: 177 VNED 180
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 162
Query: 101 FKAD 104
D
Sbjct: 163 VNED 166
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 98 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 153
Query: 101 FKAD 104
D
Sbjct: 154 VNED 157
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 101 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 156
Query: 101 FKAD 104
D
Sbjct: 157 VNED 160
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 98 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 153
Query: 101 FKAD 104
D
Sbjct: 154 VNED 157
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 99 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 154
Query: 101 FKAD 104
D
Sbjct: 155 VNED 158
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 159
Query: 101 FKAD 104
D
Sbjct: 160 VNED 163
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
A+ + QIL +++ H +H +VH +KPE++ A
Sbjct: 113 ARRLFQQILSAVDYCH-RHMVVHRDLKPENVLLDA 146
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 113 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 168
Query: 101 FKAD 104
D
Sbjct: 169 VNED 172
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 114 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 169
Query: 101 FKAD 104
D
Sbjct: 170 VNED 173
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 164
Query: 101 FKAD 104
D
Sbjct: 165 VNED 168
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA 103
A+ + QIL +++ H +H +VH +KPE++ A
Sbjct: 113 ARRLFQQILSAVDYCH-RHMVVHRDLKPENVLLDA 146
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 98 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 153
Query: 101 FKAD 104
D
Sbjct: 154 VNED 157
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 121 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 176
Query: 101 FKAD 104
D
Sbjct: 177 VNED 180
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 122 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 177
Query: 101 FKAD 104
D
Sbjct: 178 VNED 181
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 164
Query: 101 FKAD 104
D
Sbjct: 165 VNED 168
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 157
Query: 101 FKAD 104
D
Sbjct: 158 VNED 161
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 122 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 177
Query: 101 FKAD 104
D
Sbjct: 178 VNED 181
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 125 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 180
Query: 101 FKAD 104
D
Sbjct: 181 VNED 184
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 159
Query: 101 FKAD 104
D
Sbjct: 160 VNED 163
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 164
Query: 101 FKAD 104
D
Sbjct: 165 VNED 168
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 40 HVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKH-NLVHTSIKPES 98
H+C V E+++ L + + F+ L + + Q+ L L T +++H +KPE+
Sbjct: 111 HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPEN 170
Query: 99 IFF 101
I
Sbjct: 171 ILL 173
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 164
Query: 101 FKAD 104
D
Sbjct: 165 VNED 168
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 40 HVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKH-NLVHTSIKPES 98
H+C V E+++ L + + F+ L + + Q+ L L T +++H +KPE+
Sbjct: 130 HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPEN 189
Query: 99 IFF 101
I
Sbjct: 190 ILL 192
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 40 HVCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKH-NLVHTSIKPES 98
H+C V E+++ L + + F+ L + + Q+ L L T +++H +KPE+
Sbjct: 130 HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPEN 189
Query: 99 IFF 101
I
Sbjct: 190 ILL 192
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA---DHVYIMTLINIQQATT 119
A I+ I + LH+ HN+ H +KPE++ + + D V +T + TT
Sbjct: 111 AAEIMRDIGTAIQFLHS-HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 163
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 69 AKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKA---DHVYIMTLINIQQATT 119
A I+ I + LH+ HN+ H +KPE++ + + D V +T + TT
Sbjct: 130 AAEIMRDIGTAIQFLHS-HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 41 VCTVTEIMAECLCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
V VT +M L N + QK + + ++ QIL GL ++H+ +++H +KP ++
Sbjct: 131 VYLVTHLMGADLNNIVKCQKLTDDHV---QFLIYQILRGLKYIHSA-DIIHRDLKPSNLA 186
Query: 101 FKAD 104
D
Sbjct: 187 VNED 190
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 71 IIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
+ + QI EG+ H+H + ++H +KPE+I
Sbjct: 191 LFMKQICEGIRHMHQMY-ILHLDLKPENIL 219
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 65 PLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIF 100
P + K ++ QIL+G+++LH ++H +KP +I
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANIL 160
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 26.6 bits (57), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Query: 52 LCNYMIRQKFQPAPLVVAKIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKADHVYIMTL 111
L + RQ P VA IV QI H +KPE+I AD +
Sbjct: 121 LAAXLRRQGPLAPPRAVA--IVRQIGS-ALDAAHAAGATHRDVKPENILVSADDFAYLVD 177
Query: 112 INIQQATTHQE 122
I ATT ++
Sbjct: 178 FGIASATTDEK 188
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 70 KIIVNQILEGLNHLHTKHNLVHTSIKPESIFFKAD 104
+ ++ QIL GL ++H+ +++H +KP ++ D
Sbjct: 124 QFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNED 157
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,635,961
Number of Sequences: 62578
Number of extensions: 199155
Number of successful extensions: 789
Number of sequences better than 100.0: 306
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 735
Number of HSP's gapped (non-prelim): 307
length of query: 202
length of database: 14,973,337
effective HSP length: 94
effective length of query: 108
effective length of database: 9,091,005
effective search space: 981828540
effective search space used: 981828540
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.5 bits)