Query psy3208
Match_columns 144
No_of_seqs 166 out of 1384
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 19:06:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3208.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3208hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gge_A PDZ domain-containing p 99.4 1.2E-12 4.3E-17 88.8 9.3 64 5-68 27-91 (95)
2 2d92_A INAD-like protein; PDZ 99.4 2.7E-12 9.4E-17 87.9 9.2 65 4-68 42-106 (108)
3 3cbz_A Dishevelled-2; PDZ doma 99.4 3.4E-12 1.2E-16 87.6 9.7 64 5-68 32-97 (108)
4 3e17_A Tight junction protein 99.3 8.8E-12 3E-16 82.6 8.7 62 6-68 21-82 (88)
5 4amh_A Disks large homolog 1; 99.3 1.6E-11 5.5E-16 84.0 10.3 64 4-68 30-93 (106)
6 2g5m_B Neurabin-2; spinophilin 99.3 1.5E-11 5E-16 84.6 9.6 72 5-77 34-105 (113)
7 1wi4_A Synip, syntaxin binding 99.3 1E-11 3.6E-16 85.5 8.5 63 6-68 41-106 (109)
8 2awx_A Synapse associated prot 99.3 2E-11 6.9E-16 83.0 9.8 68 5-73 32-99 (105)
9 3b76_A E3 ubiquitin-protein li 99.3 1.2E-11 4.2E-16 86.5 8.8 62 5-67 52-113 (118)
10 1ujd_A KIAA0559 protein; PDZ d 99.3 2E-11 6.8E-16 84.8 9.8 63 5-68 48-110 (117)
11 1wfg_A Regulating synaptic mem 99.3 1.8E-11 6.3E-16 86.8 9.3 64 5-68 64-128 (131)
12 1wf8_A Neurabin-I; PDZ domain, 99.3 2E-11 6.9E-16 83.2 8.8 63 5-68 39-101 (107)
13 1i16_A Interleukin 16, LCF; cy 99.3 7.2E-12 2.5E-16 88.7 6.7 64 5-68 56-119 (130)
14 3egg_C Spinophilin; PP1, serin 99.3 2.1E-11 7.2E-16 90.5 9.5 61 5-66 110-170 (170)
15 2byg_A Channel associated prot 99.3 3.3E-11 1.1E-15 83.9 9.5 62 5-67 53-114 (117)
16 3axa_A Afadin, nectin-3, prote 99.3 5.9E-11 2E-15 80.7 10.5 64 4-68 36-99 (106)
17 3o46_A Maguk P55 subfamily mem 99.3 4.1E-11 1.4E-15 79.6 9.3 62 5-67 27-88 (93)
18 1wg6_A Hypothetical protein (r 99.3 1.3E-11 4.3E-16 87.2 7.1 64 5-68 54-123 (127)
19 1uhp_A Hypothetical protein KI 99.3 4.5E-11 1.5E-15 81.5 9.6 64 5-69 40-103 (107)
20 1r6j_A Syntenin 1; PDZ, membra 99.2 2.6E-11 8.8E-16 80.1 8.0 55 9-65 26-80 (82)
21 2iwo_A Multiple PDZ domain pro 99.2 4.4E-11 1.5E-15 83.7 9.7 64 5-69 52-115 (120)
22 1wha_A KIAA0147 protein, scrib 99.2 3.5E-11 1.2E-15 81.8 8.8 63 5-68 37-99 (105)
23 2i1n_A Discs, large homolog 3; 99.2 6E-11 2E-15 80.0 9.9 63 5-68 33-95 (102)
24 2qkv_A Inactivation-NO-after-p 99.2 3.4E-11 1.2E-15 80.8 8.5 63 5-68 30-92 (96)
25 2fe5_A Presynaptic protein SAP 99.2 7.2E-11 2.5E-15 78.3 9.8 62 5-67 32-93 (94)
26 1ufx_A KIAA1526 protein; PDZ d 99.2 2.6E-11 8.9E-16 82.7 7.6 62 7-68 33-98 (103)
27 2qg1_A Multiple PDZ domain pro 99.2 6.8E-11 2.3E-15 78.3 9.5 62 5-67 28-89 (92)
28 1d5g_A Human phosphatase HPTP1 99.2 8E-11 2.7E-15 78.5 9.9 63 5-68 32-94 (96)
29 2i04_A Membrane-associated gua 99.2 7.3E-11 2.5E-15 77.0 9.5 61 5-65 24-85 (85)
30 1kwa_A Hcask/LIN-2 protein; PD 99.2 4.6E-11 1.6E-15 79.1 8.5 63 5-68 24-86 (88)
31 2jik_A Synaptojanin-2 binding 99.2 7.1E-11 2.4E-15 79.5 9.6 63 5-68 36-98 (101)
32 2jil_A GRIP1 protein, glutamat 99.2 6.4E-11 2.2E-15 79.1 9.3 63 5-68 31-93 (97)
33 3sfj_A TAX1-binding protein 3; 99.2 7.7E-11 2.6E-15 79.7 9.5 62 4-66 43-104 (104)
34 1ueq_A Membrane associated gua 99.2 1.3E-10 4.6E-15 81.2 11.0 64 5-68 43-107 (123)
35 1v62_A KIAA1719 protein; struc 99.2 5.9E-11 2E-15 82.5 9.1 62 6-68 42-103 (117)
36 2vwr_A Ligand of NUMB protein 99.2 8.8E-11 3E-15 78.2 9.6 63 5-68 28-90 (95)
37 2db5_A INAD-like protein; PDZ 99.2 4.9E-11 1.7E-15 83.9 8.6 63 5-68 53-116 (128)
38 1uep_A Membrane associated gua 99.2 2.3E-11 7.9E-16 82.5 6.7 64 5-68 33-97 (103)
39 2la8_A Inactivation-NO-after-p 99.2 6.7E-11 2.3E-15 81.1 8.9 63 5-68 24-86 (106)
40 1n7e_A AMPA receptor interacti 99.2 1.4E-10 4.8E-15 77.6 10.2 62 6-68 30-91 (97)
41 2kpk_A Membrane-associated gua 99.2 1.3E-10 4.3E-15 82.1 10.3 63 6-68 43-106 (129)
42 2pa1_A PDZ and LIM domain prot 99.2 9.8E-11 3.4E-15 76.8 9.0 60 6-67 26-85 (87)
43 1uju_A Scribble; PDZ domain, c 99.2 2.9E-11 9.9E-16 83.0 6.6 64 5-69 43-106 (111)
44 2he4_A Na(+)/H(+) exchange reg 99.2 1.4E-10 4.9E-15 76.5 9.7 62 5-68 27-88 (90)
45 2v90_A PDZ domain-containing p 99.2 1.5E-10 5.2E-15 77.2 9.9 62 5-68 29-90 (96)
46 2opg_A Multiple PDZ domain pro 99.2 1.6E-10 5.4E-15 77.3 9.9 62 6-68 30-91 (98)
47 2fne_A Multiple PDZ domain pro 99.2 8.4E-11 2.9E-15 81.9 8.9 63 5-68 52-114 (117)
48 2f5y_A Regulator of G-protein 99.2 1.2E-10 4.2E-15 77.1 9.2 62 5-68 23-84 (91)
49 2uzc_A Human pdlim5, PDZ and L 99.2 1.6E-10 5.6E-15 75.8 9.6 61 5-67 26-86 (88)
50 2yt7_A Amyloid beta A4 precurs 99.2 1.2E-10 4.2E-15 78.7 9.0 62 6-67 37-99 (101)
51 2koj_A Partitioning defective 99.2 2.3E-10 7.9E-15 78.2 10.4 64 5-68 38-102 (111)
52 1ihj_A INAD; intermolecular di 99.2 1.3E-10 4.3E-15 77.8 8.9 62 5-67 36-97 (98)
53 1x6d_A Interleukin-16; PDZ dom 99.2 1.2E-10 4E-15 80.9 8.8 64 5-68 41-104 (119)
54 2q3g_A PDZ and LIM domain prot 99.2 1.2E-10 4E-15 76.7 8.4 61 5-67 26-86 (89)
55 3hpk_A Protein interacting wit 99.2 1.5E-10 5E-15 81.1 9.3 62 5-67 44-105 (125)
56 1g9o_A NHE-RF; PDZ domain, com 99.2 2.3E-10 7.9E-15 75.5 9.8 59 5-65 26-84 (91)
57 2djt_A Unnamed protein product 99.2 1.3E-10 4.5E-15 78.6 8.8 63 5-68 37-99 (104)
58 2daz_A INAD-like protein; PDZ 99.2 1.3E-10 4.4E-15 81.4 9.0 63 5-68 50-112 (124)
59 2ejy_A 55 kDa erythrocyte memb 99.2 1E-10 3.4E-15 79.4 8.1 61 5-66 35-95 (97)
60 1um1_A KIAA1849 protein, RSGI 99.2 1.7E-10 5.9E-15 78.9 9.4 63 5-68 35-97 (110)
61 2jre_A C60-1 PDZ domain peptid 99.2 1.2E-10 4.2E-15 79.3 8.5 63 5-68 43-105 (108)
62 2vz5_A TAX1-binding protein 3; 99.2 1.9E-10 6.6E-15 82.4 10.0 64 5-69 63-126 (139)
63 2q9v_A Membrane-associated gua 99.2 6.7E-11 2.3E-15 78.0 7.0 62 6-67 27-89 (90)
64 2ehr_A INAD-like protein; PDZ 99.2 1.4E-10 4.6E-15 80.3 8.8 63 5-68 49-111 (117)
65 2fcf_A Multiple PDZ domain pro 99.2 1.8E-10 6E-15 77.7 9.2 62 6-68 39-100 (103)
66 3l4f_D SH3 and multiple ankyri 99.2 1.4E-10 5E-15 82.3 9.1 61 6-68 65-125 (132)
67 2eno_A Synaptojanin-2-binding 99.2 1.2E-10 4E-15 81.0 8.4 63 5-68 46-108 (120)
68 2pkt_A PDZ and LIM domain prot 99.2 2.2E-10 7.5E-15 75.7 9.4 61 6-68 27-87 (91)
69 2o2t_A Multiple PDZ domain pro 99.2 8.4E-11 2.9E-15 81.3 7.6 63 5-68 48-111 (117)
70 1wf7_A Enigma homologue protei 99.2 1.3E-10 4.6E-15 78.6 8.4 67 5-73 28-94 (103)
71 3nfk_A Tyrosine-protein phosph 99.2 1.3E-10 4.6E-15 79.0 8.4 60 6-65 43-106 (107)
72 1rgw_A ZAsp protein; PDZ, cyph 99.2 1.3E-10 4.4E-15 75.7 8.0 60 6-67 25-84 (85)
73 1q7x_A PDZ2B domain of PTP-BAS 99.2 1E-10 3.5E-15 79.8 7.7 63 5-68 41-103 (108)
74 2dlu_A INAD-like protein; PDZ 99.2 1.4E-10 4.9E-15 79.4 8.4 63 5-68 37-99 (111)
75 2vsv_A Rhophilin-2; scaffold p 99.2 2.1E-10 7.1E-15 79.3 9.2 63 5-68 43-105 (109)
76 1qav_A Alpha-1 syntrophin (res 99.2 1.7E-10 5.9E-15 76.1 8.4 60 6-66 30-89 (90)
77 4e34_A Golgi-associated PDZ an 99.2 1.7E-10 5.8E-15 75.6 8.3 58 6-65 28-86 (87)
78 1mfg_A ERB-B2 interacting prot 99.2 2E-10 6.9E-15 76.4 8.8 61 4-67 33-93 (95)
79 1m5z_A GRIP, AMPA receptor int 99.2 2.6E-10 8.8E-15 75.3 9.3 60 5-66 31-90 (91)
80 3qe1_A Sorting nexin-27, G pro 99.2 3.3E-10 1.1E-14 77.0 10.0 61 6-68 43-103 (107)
81 2w4f_A Protein LAP4; structura 99.2 3.8E-10 1.3E-14 75.2 10.1 63 4-68 32-94 (97)
82 1x5q_A LAP4 protein; PDZ domai 99.2 4E-10 1.4E-14 77.0 10.4 63 4-68 44-106 (110)
83 2iwq_A Multiple PDZ domain pro 99.2 2.5E-10 8.6E-15 80.2 9.6 63 5-68 58-120 (123)
84 2kom_A Partitioning defective 99.1 2.7E-10 9.2E-15 79.6 9.6 63 5-67 57-120 (121)
85 1nf3_C PAR-6B; semi-CRIB motif 99.1 2.2E-10 7.5E-15 80.7 9.2 62 6-68 65-126 (128)
86 2r4h_A Membrane-associated gua 99.1 2.9E-10 1E-14 78.2 9.6 62 5-67 48-109 (112)
87 2dc2_A GOPC, golgi associated 99.1 1.8E-10 6.3E-15 78.2 8.5 61 6-68 35-96 (103)
88 3ngh_A PDZ domain-containing p 99.1 1.9E-10 6.5E-15 78.0 8.5 61 5-67 25-85 (106)
89 3khf_A Microtubule-associated 99.1 3.3E-10 1.1E-14 75.9 9.5 60 7-68 35-94 (99)
90 2ego_A General receptor for ph 99.1 3E-10 1E-14 76.0 9.2 60 5-66 36-95 (96)
91 3cyy_A Tight junction protein 99.1 3.3E-10 1.1E-14 74.7 9.2 62 6-68 23-84 (92)
92 1q3o_A Shank1; PDZ, GKAP, pept 99.1 2.2E-10 7.6E-15 78.2 8.6 61 6-68 45-105 (109)
93 1va8_A Maguk P55 subfamily mem 99.1 3.7E-10 1.2E-14 77.9 9.7 62 5-68 47-109 (113)
94 2dm8_A INAD-like protein; PDZ 99.1 1.9E-10 6.5E-15 79.2 8.3 63 6-69 43-105 (116)
95 3i4w_A Disks large homolog 4; 99.1 2.6E-10 8.8E-15 77.0 8.7 61 6-67 35-95 (104)
96 2dkr_A LIN-7 homolog B; LIN-7B 99.1 2.8E-10 9.5E-15 75.3 8.6 62 5-67 29-90 (93)
97 2dmz_A INAD-like protein; PDZ 99.1 2.5E-10 8.4E-15 80.2 8.6 63 5-68 45-107 (129)
98 1wfv_A Membrane associated gua 99.1 1.4E-10 4.7E-15 78.2 6.9 62 6-68 36-97 (103)
99 1wi2_A Riken cDNA 2700099C19; 99.1 3.5E-10 1.2E-14 76.8 8.9 61 5-68 40-100 (104)
100 1vb7_A PDZ and LIM domain 2; P 99.1 2.1E-10 7E-15 76.5 7.5 62 5-68 29-90 (94)
101 2vsp_A PDZ domain-containing p 99.1 1.6E-10 5.5E-15 76.5 6.9 62 5-68 26-87 (91)
102 3r68_A Na(+)/H(+) exchange reg 99.1 2.7E-10 9.3E-15 75.6 8.0 60 6-67 29-88 (95)
103 2rcz_A Tight junction protein 99.1 5.6E-10 1.9E-14 71.6 9.2 60 6-66 21-80 (81)
104 2jxo_A Ezrin-radixin-moesin-bi 99.1 2.6E-10 8.8E-15 76.4 7.7 60 6-66 33-92 (98)
105 3gsl_A Disks large homolog 4; 99.1 3.1E-10 1.1E-14 83.7 8.9 63 5-68 129-191 (196)
106 1n7t_A 99-MER peptide of densi 99.1 2.6E-10 9.1E-15 77.0 7.7 61 4-67 41-101 (103)
107 1v6b_A Harmonin isoform A1; st 99.1 3.2E-10 1.1E-14 78.9 8.3 61 7-67 44-107 (118)
108 2e7k_A Maguk P55 subfamily mem 99.1 3.6E-10 1.2E-14 75.1 8.2 61 5-67 28-88 (91)
109 2dls_A PDZ-rhogef, RHO guanine 99.1 5.1E-10 1.8E-14 74.4 8.9 61 5-68 28-88 (93)
110 2eeg_A PDZ and LIM domain prot 99.1 3.2E-10 1.1E-14 75.5 7.8 62 5-68 31-92 (94)
111 2cs5_A Tyrosine-protein phosph 99.1 2E-10 6.7E-15 79.7 6.9 62 6-68 41-107 (119)
112 2csj_A TJP2 protein; PDZ domai 99.1 2.3E-10 7.9E-15 79.2 7.2 62 4-68 44-105 (117)
113 2eeh_A PDZ domain-containing p 99.1 7.3E-10 2.5E-14 74.5 9.5 61 5-68 35-95 (100)
114 2kv8_A RGS12, regulator of G-p 99.1 1.2E-10 4.2E-15 75.7 5.4 60 5-66 22-81 (83)
115 2d90_A PDZ domain containing p 99.1 5.3E-10 1.8E-14 75.4 8.8 62 5-68 29-90 (102)
116 2iwn_A Multiple PDZ domain pro 99.1 5.9E-10 2E-14 73.9 8.8 62 5-67 32-93 (97)
117 1whd_A RGS3, regulator of G-pr 99.1 2.3E-10 8E-15 77.2 6.8 61 6-68 36-96 (100)
118 2edz_A PDZ domain-containing p 99.1 3.8E-10 1.3E-14 77.7 7.7 62 4-67 36-97 (114)
119 1v5q_A GRIP1 homolog, glutamat 99.1 5.5E-10 1.9E-14 78.0 8.3 64 5-68 44-108 (122)
120 2h2b_A Tight junction protein 99.1 1.2E-09 4.2E-14 74.1 9.9 62 4-68 37-98 (107)
121 1uit_A Human discs large 5 pro 99.1 1.1E-09 3.7E-14 75.7 9.7 64 5-70 41-104 (117)
122 3tsv_A Tight junction protein 99.1 7E-10 2.4E-14 78.0 8.8 62 5-67 50-112 (124)
123 2yuy_A RHO GTPase activating p 99.1 1.5E-10 5E-15 81.3 5.2 61 6-68 61-121 (126)
124 3r0h_A INAD, inactivation-NO-a 99.1 6.1E-10 2.1E-14 83.3 8.8 63 5-68 135-197 (206)
125 1uew_A Membrane associated gua 99.1 6.4E-10 2.2E-14 76.6 8.1 60 7-68 44-104 (114)
126 1wif_A RSGI RUH-020, riken cDN 99.0 3.6E-10 1.2E-14 80.1 6.8 62 5-66 48-110 (126)
127 1qau_A Neuronal nitric oxide s 99.0 1.3E-09 4.4E-14 74.6 9.0 66 5-71 25-91 (112)
128 2eei_A PDZ domain-containing p 99.0 7E-10 2.4E-14 75.2 7.6 62 5-68 31-92 (106)
129 1v5l_A PDZ and LIM domain 3; a 99.0 4.2E-10 1.4E-14 76.2 6.4 61 6-68 29-89 (103)
130 1uf1_A KIAA1526 protein; PDZ d 99.0 1.5E-09 5.2E-14 76.1 9.5 66 6-74 46-111 (128)
131 1y7n_A Amyloid beta A4 precurs 99.0 1.3E-09 4.3E-14 72.6 8.2 55 9-65 34-88 (90)
132 1ujv_A Membrane associated gua 99.0 2.2E-09 7.6E-14 72.0 9.3 60 6-68 32-92 (96)
133 2qbw_A PDZ-fibronectin fusion 99.0 1.4E-09 4.8E-14 80.8 9.1 59 4-65 22-80 (195)
134 1tp5_A Presynaptic density pro 99.0 1.6E-09 5.6E-14 74.9 8.8 61 6-67 38-98 (119)
135 3gsl_A Disks large homolog 4; 99.0 1.7E-09 5.9E-14 79.7 9.4 63 5-68 34-96 (196)
136 1vae_A Rhophilin 2, rhophilin, 99.0 7.9E-10 2.7E-14 76.4 6.8 64 5-69 35-98 (111)
137 2gzv_A PRKCA-binding protein; 99.0 2.5E-09 8.5E-14 74.0 9.2 61 6-67 50-110 (114)
138 3bpu_A Membrane-associated gua 99.0 2.4E-09 8.4E-14 70.2 8.5 60 5-67 26-86 (88)
139 1uez_A KIAA1526 protein; PDZ d 99.0 8.6E-10 3E-14 74.2 6.4 61 5-68 34-94 (101)
140 2edp_A Fragment, shroom family 99.0 9.9E-10 3.4E-14 74.1 6.7 60 6-68 35-95 (100)
141 2eaq_A LIM domain only protein 99.0 1.1E-09 3.9E-14 72.0 6.8 62 5-67 27-89 (90)
142 2z17_A Pleckstrin homology SEC 99.0 1.4E-09 4.6E-14 73.7 7.4 57 5-63 47-103 (104)
143 2edv_A FERM and PDZ domain-con 99.0 6.3E-10 2.2E-14 74.6 5.5 60 5-67 30-89 (96)
144 2kjd_A Sodium/hydrogen exchang 99.0 2.5E-09 8.5E-14 74.8 8.6 62 5-67 32-93 (128)
145 3k1r_A Harmonin; protein-prote 99.0 1.9E-09 6.4E-14 80.7 8.2 61 5-68 109-169 (192)
146 1z87_A Alpha-1-syntrophin; pro 99.0 3.7E-09 1.2E-13 83.5 10.3 63 5-69 102-165 (263)
147 1um7_A Synapse-associated prot 99.0 1.1E-09 3.8E-14 74.8 6.4 61 6-67 39-99 (113)
148 3r0h_A INAD, inactivation-NO-a 99.0 3.1E-09 1.1E-13 79.4 9.5 64 6-69 45-110 (206)
149 3soe_A Membrane-associated gua 99.0 3.6E-09 1.2E-13 73.8 8.9 60 6-68 34-94 (113)
150 1wh1_A KIAA1095 protein; PDZ d 99.0 3.6E-09 1.2E-13 73.9 8.7 62 6-69 48-109 (124)
151 1b8q_A Protein (neuronal nitri 98.9 1.8E-09 6.1E-14 75.6 7.0 63 6-69 33-96 (127)
152 3kzd_A TIAM-1, T-lymphoma inva 98.9 4.6E-09 1.6E-13 71.0 8.6 57 5-65 34-90 (94)
153 2d8i_A T-cell lymphoma invasio 98.9 2.7E-09 9.3E-14 74.2 7.1 58 6-67 44-101 (114)
154 2yub_A LIMK-2, LIM domain kina 98.9 4.5E-09 1.5E-13 73.4 7.8 62 5-68 43-106 (118)
155 2kjp_A Uncharacterized protein 98.9 8.8E-10 3E-14 73.6 3.6 64 7-74 2-66 (91)
156 3qik_A Phosphatidylinositol 3, 98.9 6E-09 2E-13 71.3 7.8 59 6-65 39-99 (101)
157 2qt5_A Glutamate receptor-inte 98.9 1.1E-08 3.9E-13 76.3 9.4 62 5-67 134-195 (200)
158 3i18_A LMO2051 protein; alpha- 98.9 6.6E-09 2.3E-13 70.1 7.2 62 4-69 5-67 (100)
159 1x5n_A Harmonin; PDZ domain, u 98.8 6.8E-09 2.3E-13 71.2 6.9 59 5-66 40-98 (114)
160 3tsz_A Tight junction protein 98.8 9.5E-09 3.3E-13 85.0 8.8 62 5-67 30-92 (391)
161 1p1d_A PDZ45, glutamate recept 98.8 1.6E-08 5.5E-13 75.4 8.6 64 5-68 35-99 (196)
162 3shw_A Tight junction protein 98.8 1.2E-08 4E-13 86.4 8.8 62 5-67 22-84 (468)
163 2qt5_A Glutamate receptor-inte 98.8 1.8E-08 6.3E-13 75.1 8.7 62 5-68 32-94 (200)
164 1w9e_A Syntenin 1; cell adhesi 98.8 2.8E-08 9.7E-13 72.3 9.4 61 5-66 26-86 (166)
165 2kl1_A YLBL protein; structure 98.8 5.1E-09 1.7E-13 70.0 4.9 60 5-68 4-64 (94)
166 1p1d_A PDZ45, glutamate recept 98.8 1.6E-08 5.5E-13 75.4 8.0 62 5-67 134-195 (196)
167 2lob_A Golgi-associated PDZ an 98.2 1.1E-09 3.7E-14 75.8 0.0 57 6-64 53-110 (112)
168 2xkx_A Disks large homolog 4; 98.7 2.9E-08 1E-12 87.6 8.1 63 5-68 88-150 (721)
169 2zpm_A Regulator of sigma E pr 98.7 1.6E-08 5.5E-13 66.5 4.7 59 7-68 5-63 (91)
170 2pzd_A Serine protease HTRA2; 98.7 8.2E-08 2.8E-12 65.6 8.3 59 5-68 34-92 (113)
171 3id1_A Regulator of sigma E pr 98.6 1E-07 3.5E-12 63.7 7.6 57 9-68 5-62 (95)
172 2l97_A HTRA, putative serine p 98.6 1.1E-07 3.8E-12 67.4 7.9 60 5-68 56-116 (134)
173 2xkx_A Disks large homolog 4; 98.6 8.1E-08 2.8E-12 84.7 8.7 63 5-68 330-392 (721)
174 3suz_A Amyloid beta A4 precurs 98.6 2.6E-08 8.7E-13 82.2 4.6 64 6-69 232-296 (388)
175 2i6v_A General secretion pathw 98.6 1.2E-07 3.9E-12 62.3 6.2 59 6-67 19-78 (87)
176 2p3w_A Probable serine proteas 98.6 2.3E-07 7.7E-12 63.4 7.9 59 5-68 34-92 (112)
177 2krg_A Na(+)/H(+) exchange reg 98.6 4.7E-08 1.6E-12 75.0 4.4 60 6-67 33-93 (216)
178 1fc6_A Photosystem II D1 prote 98.5 5.1E-07 1.7E-11 74.1 9.1 63 5-68 98-160 (388)
179 2i4s_A General secretion pathw 98.5 5.2E-07 1.8E-11 61.1 7.4 58 7-67 38-96 (105)
180 3rle_A Golgi reassembly-stacki 98.5 2.3E-07 8E-12 70.1 5.9 58 6-67 112-170 (209)
181 1te0_A Protease DEGS; two doma 98.5 3.2E-07 1.1E-11 73.4 7.0 62 5-69 243-305 (318)
182 3rle_A Golgi reassembly-stacki 98.4 7E-07 2.4E-11 67.5 7.6 62 5-68 15-77 (209)
183 3stj_A Protease DEGQ; serine p 98.4 1E-06 3.5E-11 71.6 8.3 62 5-69 262-324 (345)
184 4a8c_A Periplasmic PH-dependen 98.4 7.3E-07 2.5E-11 74.4 7.4 60 6-69 363-422 (436)
185 2hga_A Conserved protein MTH13 98.3 2.4E-06 8.4E-11 60.0 7.9 59 5-68 24-83 (125)
186 1y8t_A Hypothetical protein RV 98.3 1.3E-06 4.5E-11 69.8 7.0 61 5-68 241-303 (324)
187 1lcy_A HTRA2 serine protease; 98.3 1.2E-06 3.9E-11 70.4 6.4 59 5-68 255-313 (325)
188 3qo6_A Protease DO-like 1, chl 98.3 1.3E-06 4.3E-11 70.8 6.3 62 6-70 251-324 (348)
189 3pv2_A DEGQ; trypsin fold, PDZ 98.2 5.2E-06 1.8E-10 69.7 8.9 61 6-69 282-343 (451)
190 3pv2_A DEGQ; trypsin fold, PDZ 98.2 2.8E-06 9.4E-11 71.3 6.9 59 6-68 386-444 (451)
191 4a8c_A Periplasmic PH-dependen 98.2 6.1E-06 2.1E-10 68.8 8.4 62 5-69 262-324 (436)
192 1w9e_A Syntenin 1; cell adhesi 98.1 9.9E-06 3.4E-10 58.6 8.1 54 9-64 110-163 (166)
193 3suz_A Amyloid beta A4 precurs 98.1 3.3E-07 1.1E-11 75.6 0.0 56 8-65 317-372 (388)
194 3num_A Serine protease HTRA1; 98.1 4.8E-07 1.6E-11 72.7 0.0 67 5-76 253-319 (332)
195 3k50_A Putative S41 protease; 98.0 4.1E-06 1.4E-10 69.5 4.9 57 7-68 91-147 (403)
196 4fgm_A Aminopeptidase N family 98.0 5.4E-06 1.8E-10 71.9 5.6 60 6-69 496-556 (597)
197 1ky9_A Protease DO, DEGP, HTRA 97.9 5.6E-06 1.9E-10 69.4 3.1 62 5-69 285-347 (448)
198 1ky9_A Protease DO, DEGP, HTRA 97.7 4.9E-06 1.7E-10 69.7 0.0 59 6-68 383-441 (448)
199 1k32_A Tricorn protease; prote 97.5 0.00026 9E-09 63.6 7.9 59 6-67 748-815 (1045)
200 4fln_A Protease DO-like 2, chl 97.2 0.00085 2.9E-08 57.6 7.5 59 4-65 413-471 (539)
201 4fln_A Protease DO-like 2, chl 97.0 0.0011 3.8E-08 56.9 6.1 64 5-70 276-348 (539)
202 3dor_A Protein CT_858, CPAF; m 21.7 87 0.003 27.0 4.0 28 8-40 98-125 (583)
No 1
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.41 E-value=1.2e-12 Score=88.85 Aligned_cols=64 Identities=17% Similarity=0.252 Sum_probs=58.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCC-CeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPR-GIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~-~~V~L~V~r~~~ 68 (144)
...+||++|.++++|++.|+|++||+|++|||+++.+++|.+++++|++.+. .+++|++.++..
T Consensus 27 ~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p~~ 91 (95)
T 3gge_A 27 VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKK 91 (95)
T ss_dssp SSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEECS
T ss_pred CCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECccc
Confidence 4568999999999999999999999999999999999999999999999864 379999988764
No 2
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.38 E-value=2.7e-12 Score=87.94 Aligned_cols=65 Identities=51% Similarity=0.771 Sum_probs=59.6
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
...+++|..|.++++|+++|+|++||+|++|||+++.+++|++++.+|+..+...|.|+|.|+..
T Consensus 42 ~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~~~ 106 (108)
T 2d92_A 42 TRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSGPS 106 (108)
T ss_dssp TCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECCCC
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCCC
Confidence 46789999999999999999999999999999999999999999999999755689999998653
No 3
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.37 E-value=3.4e-12 Score=87.61 Aligned_cols=64 Identities=38% Similarity=0.534 Sum_probs=58.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC--CCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA--PRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~--~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.+++|++++.+|+.. ....|.|+|.|...
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCC
Confidence 57899999999999999999999999999999999999999999999987 33579999999764
No 4
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.32 E-value=8.8e-12 Score=82.58 Aligned_cols=62 Identities=27% Similarity=0.412 Sum_probs=56.4
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.|++|..|.++++|+++|+|+.||+|++|||+++.++++++++++|+..+ +.+.|+|.+...
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~-~~v~L~v~~~~~ 82 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSR-GKLQLVVLRDLE 82 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTT-TEEEEEECCC--
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEeCCCc
Confidence 47999999999999999999999999999999999999999999999986 699999987543
No 5
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.32 E-value=1.6e-11 Score=83.97 Aligned_cols=64 Identities=36% Similarity=0.576 Sum_probs=59.1
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.+.|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..+ ..|.|+|.|...
T Consensus 30 ~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~ 93 (106)
T 4amh_A 30 GDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTS-DFVYLKVAKPGS 93 (106)
T ss_dssp TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCC-SEEEEEEECCSS
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCC-CeEEEEEEeCCC
Confidence 3558999999999999999999999999999999999999999999999875 699999999764
No 6
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.30 E-value=1.5e-11 Score=84.64 Aligned_cols=72 Identities=25% Similarity=0.384 Sum_probs=63.3
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCCCCCccccc
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPIPDSSCSQV 77 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~~~~~~~~~ 77 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|........+.+.
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~~~~~~~v~p~ 105 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTK-GRVRFMIGRERPGEQSEVAQL 105 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSC-SSCEEEEEECCCCTTSSCSSC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC-CeEEEEEEeCCCCCcchhhhh
Confidence 569999999999999999999999999999999999999999999999874 789999999876555554443
No 7
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=1e-11 Score=85.46 Aligned_cols=63 Identities=29% Similarity=0.512 Sum_probs=58.4
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC---CCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP---RGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~---~~~V~L~V~r~~~ 68 (144)
.+++|..|.++++|+++|+|++||+|++|||+++.+++|++++++|+... ...+.|.|.|...
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCCC
Confidence 47999999999999999999999999999999999999999999999987 6789999988653
No 8
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.30 E-value=2e-11 Score=83.00 Aligned_cols=68 Identities=35% Similarity=0.544 Sum_probs=58.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCCCCCc
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPIPDSS 73 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~~~~~ 73 (144)
+.|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|........
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~~~~~~ 99 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTS-DFVYLKVAKPTSMYISR 99 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCC-SEEEEEEECCCC-----
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEcCCCCCCcc
Confidence 458999999999999999999999999999999999999999999999874 79999999977644433
No 9
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.29 E-value=1.2e-11 Score=86.51 Aligned_cols=62 Identities=31% Similarity=0.431 Sum_probs=57.6
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+|+..+ ..|.|+|.|..
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~-~~v~L~v~R~~ 113 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTS-SSIVLKALEVK 113 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCC-SEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 568999999999999999999999999999999999999999999999885 78999998754
No 10
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=2e-11 Score=84.79 Aligned_cols=63 Identities=24% Similarity=0.366 Sum_probs=58.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.+++|.+++.+|+..+ ..|.|+|.|...
T Consensus 48 ~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~ 110 (117)
T 1ujd_A 48 EIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQS-GEAEICVRLDLN 110 (117)
T ss_dssp CEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCS-SCEEEEEESSCC
T ss_pred CcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC-CEEEEEEEECCc
Confidence 458999999999999999999999999999999999999999999999864 789999998764
No 11
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.28 E-value=1.8e-11 Score=86.84 Aligned_cols=64 Identities=23% Similarity=0.359 Sum_probs=58.6
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~~ 68 (144)
..++||..|.++++|+++|+|++||+|++|||+++.+++|.+++++|+.. ....|.|+|.|..+
T Consensus 64 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 64 RLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp CEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEECS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCCC
Confidence 45899999999999999999999999999999999999999999999987 34689999998654
No 12
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=2e-11 Score=83.25 Aligned_cols=63 Identities=24% Similarity=0.430 Sum_probs=58.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++||++++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~ 101 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTK-GNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHCC-SEEEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC-CeEEEEEEeCCC
Confidence 568999999999999999999999999999999999999999999999874 799999998664
No 13
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.27 E-value=7.2e-12 Score=88.73 Aligned_cols=64 Identities=20% Similarity=0.359 Sum_probs=58.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.++++|+++|.|++||+|++|||+++.+++|++++++|+..+...|.|+|.|...
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKSL 119 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEESS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeCCC
Confidence 4689999999999999994599999999999999999999999999999876689999988653
No 14
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.27 E-value=2.1e-11 Score=90.50 Aligned_cols=61 Identities=25% Similarity=0.402 Sum_probs=57.3
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~ 66 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.+++|.+++.+|+..+ ..|.|+|.|.
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g-~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTK-GRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCC-SEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CEEEEEEEeC
Confidence 568999999999999999999999999999999999999999999999975 7999999873
No 15
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=3.3e-11 Score=83.90 Aligned_cols=62 Identities=39% Similarity=0.598 Sum_probs=57.6
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
+.|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++..+ ..|.|+|.|..
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g-~~v~l~v~R~~ 114 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTS-EVVYLKVGKPT 114 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCC
Confidence 568999999999999999999999999999999999999999999999874 78999998854
No 16
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.26 E-value=5.9e-11 Score=80.70 Aligned_cols=64 Identities=34% Similarity=0.520 Sum_probs=58.7
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
...|++|..|.++++|+++|+|++||+|++||++++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 36 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~~ 99 (106)
T 3axa_A 36 DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS-SVVTLEVAKQGA 99 (106)
T ss_dssp SSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEECCCS
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCc
Confidence 3568999999999999999999999999999999999999999999998864 799999998764
No 17
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.25 E-value=4.1e-11 Score=79.65 Aligned_cols=62 Identities=19% Similarity=0.343 Sum_probs=57.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..+++|..|.++++|+++|+|++||+|++|||+++.+++|.+++.+|+..+ ..+.|+|.+..
T Consensus 27 ~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~~~ 88 (93)
T 3o46_A 27 TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQ-GAITFKIIPGS 88 (93)
T ss_dssp TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCC-EEEEEEEECC-
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEeCC
Confidence 468999999999999999999999999999999999999999999999986 58999998754
No 18
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.25 E-value=1.3e-11 Score=87.20 Aligned_cols=64 Identities=30% Similarity=0.457 Sum_probs=58.1
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC------CCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA------PRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~------~~~~V~L~V~r~~~ 68 (144)
..+++|..|.+++||+++|+|++||+|++|||+++.+++|.+++.+|+.. ....|.|+|.|...
T Consensus 54 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 54 DLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp EEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 35899999999999999999999999999999999999999999999975 23689999998764
No 19
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=4.5e-11 Score=81.51 Aligned_cols=64 Identities=31% Similarity=0.367 Sum_probs=57.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPI 69 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~ 69 (144)
..+++|..|.++++|+++|.|++||+|++||++++.++++.+++.+++..+ ..+.|+|.|..+.
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~~ 103 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAK-EPIVVQVLRRTSG 103 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHHCC-SSEEEEEEECCSS
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CcEEEEEEeCCCC
Confidence 568999999999999999339999999999999999999999999999875 6899999887653
No 20
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.25 E-value=2.6e-11 Score=80.13 Aligned_cols=55 Identities=18% Similarity=0.234 Sum_probs=50.9
Q ss_pred EEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEc
Q psy3208 9 VIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAK 65 (144)
Q Consensus 9 ~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r 65 (144)
+|.++.+++||+++| |+.||+|++|||+++.+++|++++++|+..+ ..|+|+|..
T Consensus 26 ~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g-~~V~L~v~p 80 (82)
T 1r6j_A 26 KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSG-TVVTITIMP 80 (82)
T ss_dssp EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSC-SEEEEEEEE
T ss_pred EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCC-CEEEEEEEe
Confidence 478999999999999 9999999999999999999999999999764 789999864
No 21
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.25 E-value=4.4e-11 Score=83.67 Aligned_cols=64 Identities=30% Similarity=0.419 Sum_probs=57.9
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPI 69 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~ 69 (144)
..|++|..|.++++|+++|.|++||+|++|||+++.++++.+++.+++..+ ..|.|+|.|....
T Consensus 52 ~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 52 DVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS-GSIEMQVVAGGDV 115 (120)
T ss_dssp EEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC-SEEEEEEECCTTS
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCcc
Confidence 358999999999999999449999999999999999999999999999986 6899999997653
No 22
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=3.5e-11 Score=81.78 Aligned_cols=63 Identities=29% Similarity=0.428 Sum_probs=58.1
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
+.+++|..|.++++|+++|+|++||+|++||++++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~g-~~v~l~v~R~~~ 99 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAAS-PTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSCC-SCEEEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCC
Confidence 578999999999999999999999999999999999999999999999874 689999998754
No 23
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.24 E-value=6e-11 Score=80.04 Aligned_cols=63 Identities=38% Similarity=0.575 Sum_probs=58.3
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~~ 95 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAG-PVVRLVVRRRQP 95 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC-SEEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCC
Confidence 569999999999999999999999999999999999999999999999864 799999998664
No 24
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.24 E-value=3.4e-11 Score=80.77 Aligned_cols=63 Identities=29% Similarity=0.472 Sum_probs=57.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.++++.++..+++..+ +.+.|+|.|+.+
T Consensus 30 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~p 92 (96)
T 2qkv_A 30 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGAN-GKVSMEVTRPKP 92 (96)
T ss_dssp SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCS-SEEEEEEECCCC
T ss_pred CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC-CcEEEEEEeCCc
Confidence 358999999999999999999999999999999999999999999998875 689999998754
No 25
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.24 E-value=7.2e-11 Score=78.33 Aligned_cols=62 Identities=44% Similarity=0.648 Sum_probs=56.9
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|..
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~g 93 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS-DMVYLKVAKPG 93 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC-SEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEcCC
Confidence 458999999999999999999999999999999999999999999999875 58999998854
No 26
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=2.6e-11 Score=82.73 Aligned_cols=62 Identities=23% Similarity=0.236 Sum_probs=56.4
Q ss_pred cEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC----CCCeEEEEEEcCCC
Q psy3208 7 VIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA----PRGIVKIGVAKPLP 68 (144)
Q Consensus 7 gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~----~~~~V~L~V~r~~~ 68 (144)
.++|..|.++++|+++|+|++||+|++|||+++.+++|++++++|+.. ....+.|+|.|...
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEccc
Confidence 359999999999999999999999999999999999999999999985 45689999988664
No 27
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.23 E-value=6.8e-11 Score=78.26 Aligned_cols=62 Identities=34% Similarity=0.564 Sum_probs=57.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.++..+++..+ ..+.|+|.|..
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~ 89 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSL-GTVTLEVGRIS 89 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEccc
Confidence 468999999999999999999999999999999999999999999998875 68999999875
No 28
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.23 E-value=8e-11 Score=78.50 Aligned_cols=63 Identities=32% Similarity=0.515 Sum_probs=57.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.++++.++..+++..+ ..+.|+|.|...
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g-~~v~l~v~R~~~ 94 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG-QVVHLLLEKGQS 94 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC-SEEEEEEECCSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEcCCC
Confidence 458999999999999999999999999999999999999999999999864 789999988653
No 29
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.23 E-value=7.3e-11 Score=77.02 Aligned_cols=61 Identities=30% Similarity=0.473 Sum_probs=55.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEc
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAK 65 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r 65 (144)
..+++|..|.+++||+++|+|++||+|++|||+++.++++.++.++++..+ ...+.|+|.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 457999999999999999999999999999999999999999999999874 3688998865
No 30
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=4.6e-11 Score=79.09 Aligned_cols=63 Identities=16% Similarity=0.331 Sum_probs=56.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.+++||++++.|++||+|++|||+++.+++|++++++|+..+ ..+.|+|.|...
T Consensus 24 ~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 86 (88)
T 1kwa_A 24 LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMR-GSITFKIVPSYR 86 (88)
T ss_dssp GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCC-EEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC-CcEEEEEECCcC
Confidence 357999999999999994349999999999999999999999999999987 489999988653
No 31
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.23 E-value=7.1e-11 Score=79.53 Aligned_cols=63 Identities=35% Similarity=0.475 Sum_probs=57.6
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|+.||+|++|||+++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~~ 98 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG-YAVSLRVQHRLE 98 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTCC-SEEEEEEEEESC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEeCCC
Confidence 468999999999999999999999999999999999999999999999874 689999988654
No 32
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.23 E-value=6.4e-11 Score=79.11 Aligned_cols=63 Identities=30% Similarity=0.430 Sum_probs=58.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.+++||+++|+|++||+|++|||+++.++++.++..+|+.. ...+.|+|.|...
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~~ 93 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC-GQEAALLIEYDVS 93 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS-CSEEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCC
Confidence 46899999999999999999999999999999999999999999999984 4799999998664
No 33
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.22 E-value=7.7e-11 Score=79.66 Aligned_cols=62 Identities=26% Similarity=0.417 Sum_probs=56.3
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~ 66 (144)
...|++|..|.+++||+++| |++||+|++|||+++.+++|++++.+++......+.|+|.|.
T Consensus 43 ~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 43 TDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp TCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEEC
T ss_pred CCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEcC
Confidence 46789999999999999999 999999999999999999999999999876556899999773
No 34
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=1.3e-10 Score=81.23 Aligned_cols=64 Identities=20% Similarity=0.430 Sum_probs=58.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r~~~ 68 (144)
..+++|..|.++++|+++|+|++||+|++|||+++.++++.+++++|+..+ ...|.|+|.|...
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 457999999999999999999999999999999999999999999999864 4689999998764
No 35
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=5.9e-11 Score=82.47 Aligned_cols=62 Identities=27% Similarity=0.429 Sum_probs=57.1
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.+++|..|.++++|+++|+|++||+|++|||+++.++++++++.+|+.. ...|.|+|.|...
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 103 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASI-SEKVRLEILPVPQ 103 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSC-SSEEEEEECCBTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEECCC
Confidence 3599999999999999999999999999999999999999999999975 4799999998654
No 36
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.22 E-value=8.8e-11 Score=78.23 Aligned_cols=63 Identities=32% Similarity=0.492 Sum_probs=57.6
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~~ 90 (95)
T 2vwr_A 28 EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASG-ERVNLTIARPGK 90 (95)
T ss_dssp SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEEEEESC
T ss_pred CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CEEEEEEEcCCc
Confidence 458999999999999999999999999999999999999999999998874 799999988654
No 37
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.22 E-value=4.9e-11 Score=83.87 Aligned_cols=63 Identities=33% Similarity=0.510 Sum_probs=57.8
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCC-CCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLN-NASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~-~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++. ++++.+++.+|+..+ ..|.|+|.|...
T Consensus 53 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 116 (128)
T 2db5_A 53 KVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTT-GSLRLIVAREPV 116 (128)
T ss_dssp CEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCC-SEEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCC-CeEEEEEEcCCC
Confidence 348999999999999999999999999999999997 999999999999864 799999998754
No 38
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=2.3e-11 Score=82.51 Aligned_cols=64 Identities=25% Similarity=0.398 Sum_probs=58.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r~~~ 68 (144)
..+++|..|.++++|+++|+|++||+|++|||+++.++++.+++++|+..+ ...|.|+|.|...
T Consensus 33 ~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 33 GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCCC
Confidence 468999999999999999999999999999999999999999999998873 3689999998654
No 39
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.21 E-value=6.7e-11 Score=81.11 Aligned_cols=63 Identities=29% Similarity=0.469 Sum_probs=57.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.++++.++..+++..+ +.+.|+|.|..+
T Consensus 24 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~ 86 (106)
T 2la8_A 24 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGAN-GKVSMEVTRPKP 86 (106)
T ss_dssp SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCB-SCEEEEEEECCS
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCC-CeEEEEEEeCCC
Confidence 358999999999999999999999999999999999999999999998875 689999998654
No 40
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.21 E-value=1.4e-10 Score=77.62 Aligned_cols=62 Identities=31% Similarity=0.486 Sum_probs=56.9
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.+++|..|.++++|+++|+|++||+|++|||+++.++++.++..+++.. ...+.|+|.|...
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMA-GETVTLKIKKQTD 91 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCC
Confidence 5899999999999999999999999999999999999999999999954 4789999998764
No 41
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.21 E-value=1.3e-10 Score=82.06 Aligned_cols=63 Identities=30% Similarity=0.476 Sum_probs=57.8
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r~~~ 68 (144)
.+++|..|.++++|+++|+|+.||+|++|||+++.+++|.+++++|+..+ ...|.|+|.|...
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 46999999999999999999999999999999999999999999999885 3689999998764
No 42
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.20 E-value=9.8e-11 Score=76.80 Aligned_cols=60 Identities=18% Similarity=0.331 Sum_probs=56.4
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
.+++|..|.+++||+++| |++||+|++|||+++.++++.++.++++..+ ..+.|+|.|..
T Consensus 26 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~ 85 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SPLRLQLDRIT 85 (87)
T ss_dssp EEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SSEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEecC
Confidence 489999999999999999 9999999999999999999999999999986 78999999865
No 43
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=2.9e-11 Score=82.97 Aligned_cols=64 Identities=31% Similarity=0.377 Sum_probs=58.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPI 69 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~ 69 (144)
..|++|..|.++++|+++|+|++||+|++||++++.++++.+++.+++..+ ..+.|+|.|....
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~g-~~v~l~v~r~~~~ 106 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVG-DTLTVLVCDGFES 106 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSSCS-SEEEECCCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCCC
Confidence 568999999999999999999999999999999999999999999998864 7899999887643
No 44
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.20 E-value=1.4e-10 Score=76.48 Aligned_cols=62 Identities=26% Similarity=0.336 Sum_probs=56.9
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++| |++||+|++|||+++.+++|.++.++|+.. ...+.|+|.|...
T Consensus 27 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~~~ 88 (90)
T 2he4_A 27 RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAR-EDEARLLVVGPST 88 (90)
T ss_dssp SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS-SSEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEccCC
Confidence 3589999999999999999 999999999999999999999999999987 4799999998653
No 45
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.20 E-value=1.5e-10 Score=77.20 Aligned_cols=62 Identities=21% Similarity=0.347 Sum_probs=57.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++| |++||+|++|||+++.++++.++..+++.. ...+.|+|.|...
T Consensus 29 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 90 (96)
T 2v90_A 29 RPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQ-GSCVSLTVVDPEA 90 (96)
T ss_dssp CEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEEECCCT
T ss_pred CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEECCCC
Confidence 3489999999999999999 999999999999999999999999999987 4799999999764
No 46
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.20 E-value=1.6e-10 Score=77.31 Aligned_cols=62 Identities=32% Similarity=0.511 Sum_probs=57.6
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~ 91 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP-QRVRLTLYRDEA 91 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEECSS
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEcCCC
Confidence 58999999999999999999999999999999999999999999999876 799999998664
No 47
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=8.4e-11 Score=81.89 Aligned_cols=63 Identities=29% Similarity=0.435 Sum_probs=57.6
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..+ ..|.|+|.|...
T Consensus 52 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~g~ 114 (117)
T 2fne_A 52 DLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK-GTVTLMVLSSDE 114 (117)
T ss_dssp EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SSEEEEEEECSC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCc
Confidence 358999999999999999999999999999999999999999999999876 579999998653
No 48
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=1.2e-10 Score=77.11 Aligned_cols=62 Identities=18% Similarity=0.306 Sum_probs=56.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.++++|+++| |+.||+|++|||+++.++++.++..+++..+ ..+.|+|.|..+
T Consensus 23 ~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~ 84 (91)
T 2f5y_A 23 DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCP-SEIILLVWRMVP 84 (91)
T ss_dssp SSSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCS-SEEEEEEEECC-
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCC
Confidence 3578999999999999999 9999999999999999999999999999865 689999998765
No 49
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.19 E-value=1.6e-10 Score=75.78 Aligned_cols=61 Identities=23% Similarity=0.339 Sum_probs=55.9
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..+++|..|.+++||+++| |++||+|++|||+++.++++.++..+++.. ...+.|+|.|..
T Consensus 26 ~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g 86 (88)
T 2uzc_A 26 NMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGC-TGSLNMTLQRES 86 (88)
T ss_dssp TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEECCC
T ss_pred CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeCC
Confidence 3479999999999999999 999999999999999999999999999887 478999998865
No 50
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.18 E-value=1.2e-10 Score=78.72 Aligned_cols=62 Identities=27% Similarity=0.369 Sum_probs=55.4
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~ 67 (144)
.+++|..|.++++|++++.|++||+|++|||+++.+++++++.++|+.. ....|.|+|.|..
T Consensus 37 ~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHCP 99 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 3699999999999999666999999999999999999999999999984 3468999998864
No 51
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.18 E-value=2.3e-10 Score=78.24 Aligned_cols=64 Identities=33% Similarity=0.514 Sum_probs=58.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..+ ...|.|+|.|...
T Consensus 38 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 102 (111)
T 2koj_A 38 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEE 102 (111)
T ss_dssp SSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCC
T ss_pred CcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 368999999999999999999999999999999999999999999999862 4689999988764
No 52
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.18 E-value=1.3e-10 Score=77.79 Aligned_cols=62 Identities=31% Similarity=0.420 Sum_probs=56.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.++..+++.. ...+.|+|.|..
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~g 97 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEA-DFKIELEIQTFD 97 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHS-CSEEEEEEEEC-
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CCeEEEEEEeCC
Confidence 45899999999999999999999999999999999999999999999985 479999998864
No 53
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.18 E-value=1.2e-10 Score=80.85 Aligned_cols=64 Identities=23% Similarity=0.412 Sum_probs=57.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..+...+.|+|.|...
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~~~ 104 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKLT 104 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCCC
Confidence 3589999999999999999999999999999999999999999999998875667788888654
No 54
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.18 E-value=1.2e-10 Score=76.73 Aligned_cols=61 Identities=20% Similarity=0.390 Sum_probs=55.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..|++|..|.+++||+++| |++||+|++|||+++.++++.++..+++..+ ..+.|+|.|..
T Consensus 26 ~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~ 86 (89)
T 2q3g_A 26 NVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACG-ERLSLGLSRAI 86 (89)
T ss_dssp TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCT-TEEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CEEEEEEEeCC
Confidence 3579999999999999999 9999999999999999999999999998874 68999998865
No 55
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.18 E-value=1.5e-10 Score=81.08 Aligned_cols=62 Identities=19% Similarity=0.250 Sum_probs=56.8
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..+++|..|.++++|+++|+|+.||+|++|||+++.+++|.+++.+++..+ ..|.|+|.|..
T Consensus 44 ~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~ 105 (125)
T 3hpk_A 44 CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK-GEVTIHYNKLQ 105 (125)
T ss_dssp CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSC-SEEEEEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 357999999999999999999999999999999999999999999999986 57999998743
No 56
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.17 E-value=2.3e-10 Score=75.51 Aligned_cols=59 Identities=29% Similarity=0.434 Sum_probs=52.1
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEc
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAK 65 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r 65 (144)
..|++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++..+ +.+.+.+.+
T Consensus 26 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~~~~~~~~ 84 (91)
T 1g9o_A 26 KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAAL-NAVRLLVVD 84 (91)
T ss_dssp CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCS-SEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CcEEEEEEc
Confidence 3589999999999999999 9999999999999999999999999999886 555555544
No 57
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=1.3e-10 Score=78.59 Aligned_cols=63 Identities=27% Similarity=0.418 Sum_probs=57.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.+++||+++|+|++||+|++||++++.++++.+++.+++.. ...+.|+|.|...
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g~ 99 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAG-GPQLHLVIRRPLS 99 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHT-CSEEEEEECCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECCC
Confidence 46899999999999999999999999999999999999999999999885 4789999988764
No 58
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.17 E-value=1.3e-10 Score=81.35 Aligned_cols=63 Identities=30% Similarity=0.376 Sum_probs=58.1
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 50 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~ 112 (124)
T 2daz_A 50 RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP-SKVKLVFIRNED 112 (124)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC-SEEEEEEEECTT
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCC
Confidence 468999999999999999999999999999999999999999999999886 699999998754
No 59
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.17 E-value=1e-10 Score=79.36 Aligned_cols=61 Identities=26% Similarity=0.475 Sum_probs=55.8
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~ 66 (144)
+.+++|..|.+++||+++|+|++||+|++|||+++.+++++++.++|+..+ ..+.|+|.+.
T Consensus 35 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~-~~v~L~V~~~ 95 (97)
T 2ejy_A 35 KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETK-GMISLKVIPN 95 (97)
T ss_dssp TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCC-EEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEEC
Confidence 358999999999999999999999999999999999988999999999874 6899998754
No 60
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=1.7e-10 Score=78.85 Aligned_cols=63 Identities=32% Similarity=0.394 Sum_probs=58.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++|+|++||+|++||++++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~ 97 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG-KKMRFLVAKSDV 97 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCC-SEEEEEEECCCH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCc
Confidence 468999999999999999999999999999999999999999999999874 799999998753
No 61
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.17 E-value=1.2e-10 Score=79.25 Aligned_cols=63 Identities=32% Similarity=0.605 Sum_probs=57.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++.. ...+.|+|.|...
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~~ 105 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNA-GNPVRLLLIRRLP 105 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHH-CSEEEEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 45899999999999999999999999999999999999999999999885 4789999988664
No 62
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.17 E-value=1.9e-10 Score=82.42 Aligned_cols=64 Identities=25% Similarity=0.369 Sum_probs=57.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPI 69 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~ 69 (144)
..|++|..|.+++||+++| |++||+|++|||+++.++++.++..+|+......+.|+|.|....
T Consensus 63 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~ 126 (139)
T 2vz5_A 63 DKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQSLQ 126 (139)
T ss_dssp CCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEECC--
T ss_pred CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEECCEE
Confidence 5699999999999999999 999999999999999999999999999985546899999997653
No 63
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.17 E-value=6.7e-11 Score=77.97 Aligned_cols=62 Identities=35% Similarity=0.463 Sum_probs=56.1
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCC-CeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPR-GIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~-~~V~L~V~r~~ 67 (144)
.+++|..|.+++||+++|+|++||+|++|||+++.++++.++..+++..+. ..+.|+|.|..
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecc
Confidence 579999999999999999999999999999999999999999999988752 38999998753
No 64
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.17 E-value=1.4e-10 Score=80.28 Aligned_cols=63 Identities=32% Similarity=0.331 Sum_probs=57.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~r~~~ 111 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNAG-NPVVFIVQSLSS 111 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHTSC-SSEEEEECCBSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCC
Confidence 468999999999999999999999999999999999999999999999864 789999987654
No 65
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=1.8e-10 Score=77.73 Aligned_cols=62 Identities=32% Similarity=0.434 Sum_probs=55.9
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.|++|..|.+++||+++|+|++||+|++|||+++.++++.++..+|+..+ ..+.|+|.|...
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 100 (103)
T 2fcf_A 39 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAG-NPVVFMVQSIIS 100 (103)
T ss_dssp --EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SSEEEEEECCCC
T ss_pred CCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEECCC
Confidence 58999999999999999999999999999999999999999999999885 589999988653
No 66
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.17 E-value=1.4e-10 Score=82.34 Aligned_cols=61 Identities=23% Similarity=0.269 Sum_probs=56.3
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.|++|..|.++++|+++| |+.||+|++|||+++.++++.+++.+|+..+ ..+.|+|.+...
T Consensus 65 ~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g-~~v~l~v~~~~~ 125 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGG-NTLMVKVVMVTR 125 (132)
T ss_dssp CSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHHHHHHHHTT-TEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CEEEEEEEECCC
Confidence 479999999999999999 9999999999999999999999999999875 789999988653
No 67
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=1.2e-10 Score=81.03 Aligned_cols=63 Identities=35% Similarity=0.476 Sum_probs=57.8
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.++++|+++|+|++||+|++||++++.++++.+++.+++..+ ..|.|+|.|...
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~~ 108 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG-YAVSLRVQHRLQ 108 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHHC-SEEEEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCc
Confidence 568999999999999999999999999999999999999999999998864 689999988654
No 68
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.17 E-value=2.2e-10 Score=75.70 Aligned_cols=61 Identities=23% Similarity=0.349 Sum_probs=56.2
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.+++|..|.+++||+++| |++||+|++|||+++.++.+.++..+++.. ...+.|+|.|...
T Consensus 27 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~g~ 87 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGC-TDNLTLTVARSEH 87 (91)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC-SSEEEEEEEEECC
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECCc
Confidence 589999999999999999 999999999999999999999999999984 5799999998664
No 69
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.16 E-value=8.4e-11 Score=81.25 Aligned_cols=63 Identities=29% Similarity=0.408 Sum_probs=58.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCC-CCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLN-NASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~-~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++. ++++.+++.+++..+ ..+.|+|.|...
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~-~~v~l~v~R~~~ 111 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAK-DTVQLVIARGSL 111 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCC-SEEEEEEESSCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCC-CEEEEEEEeCCc
Confidence 468999999999999999999999999999999998 899999999999864 799999998764
No 70
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.16 E-value=1.3e-10 Score=78.60 Aligned_cols=67 Identities=21% Similarity=0.288 Sum_probs=58.6
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCCCCCc
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPIPDSS 73 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~~~~~ 73 (144)
..+++|..|.++++|+++| |++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|........
T Consensus 28 ~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~g~~~~~~ 94 (103)
T 1wf7_A 28 NMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACT-GSLNMTLQRASAAAKSE 94 (103)
T ss_dssp TEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCS-SEEEEEECCCSCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCCcCCCC
Confidence 3468999999999999999 9999999999999999999999999998874 68999999877544433
No 71
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.16 E-value=1.3e-10 Score=78.95 Aligned_cols=60 Identities=27% Similarity=0.408 Sum_probs=54.9
Q ss_pred CcEEEEEEcCCChhhhcC-CcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCC---CeEEEEEEc
Q psy3208 6 TVIVIRSLVPGGVAQLDA-RLIPGDRLLSVNETDLNNASLDQAVQALKGAPR---GIVKIGVAK 65 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~G-rL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~---~~V~L~V~r 65 (144)
.+++|..|.++++|+++| ||+.||+|++|||+++.++++.+++.+++.... ..|.|+|.|
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEEC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEc
Confidence 479999999999999999 699999999999999999999999999998752 389999987
No 72
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.16 E-value=1.3e-10 Score=75.73 Aligned_cols=60 Identities=18% Similarity=0.287 Sum_probs=54.7
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
.+++|..|.+++||+++| |++||+|++|||+++.++++.++..+++..+ ..+.|+|.|..
T Consensus 25 ~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~ 84 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSAS-YNLSLTLQKSK 84 (85)
T ss_dssp SCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCS-SCEEEEEESCC
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCC-CeEEEEEEeCC
Confidence 478999999999999999 9999999999999999999999999998775 57999998854
No 73
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=1e-10 Score=79.75 Aligned_cols=63 Identities=32% Similarity=0.515 Sum_probs=58.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++||++++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~~ 103 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG-QVVHLLLEKGQS 103 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHTT-SEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCc
Confidence 468999999999999999999999999999999999999999999999874 799999998764
No 74
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.16 E-value=1.4e-10 Score=79.36 Aligned_cols=63 Identities=32% Similarity=0.565 Sum_probs=57.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
+.|++|..|.++++|+++|+|+.||+|++|||+++.++++.+++.+++..+ ..|.|+|.|...
T Consensus 37 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g-~~v~l~v~R~~~ 99 (111)
T 2dlu_A 37 TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCG-NSVRMLVARDPA 99 (111)
T ss_dssp SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHC-SEEEEEEEESCT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEeCCC
Confidence 368999999999999999999999999999999999999999999998864 689999988654
No 75
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.16 E-value=2.1e-10 Score=79.33 Aligned_cols=63 Identities=19% Similarity=0.226 Sum_probs=56.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.+++||+++| |+.||+|++|||+++.++++.++.++|+..+...+.|+|.|..+
T Consensus 43 ~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~~~ 105 (109)
T 2vsv_A 43 NAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSLLD 105 (109)
T ss_dssp SSSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESCC-
T ss_pred CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEECCC
Confidence 3578999999999999999 99999999999999999999999999998865569999998764
No 76
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.16 E-value=1.7e-10 Score=76.06 Aligned_cols=60 Identities=38% Similarity=0.421 Sum_probs=54.4
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~ 66 (144)
.+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|.
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~ 89 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTG-KEVVLEVKYM 89 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEEe
Confidence 57999999999999999339999999999999999999999999999875 6899999774
No 77
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.15 E-value=1.7e-10 Score=75.57 Aligned_cols=58 Identities=29% Similarity=0.423 Sum_probs=52.7
Q ss_pred CcEEEEEEcCCChhhh-cCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEc
Q psy3208 6 TVIVIRSLVPGGVAQL-DARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAK 65 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~-~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r 65 (144)
.+++|..|.+++||++ +| |++||+|++|||+++.++++.+++.+++..+ ..+.|+|.+
T Consensus 28 ~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQR-GEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEE
Confidence 4799999999999999 57 9999999999999999999999999999875 688888864
No 78
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.15 E-value=2e-10 Score=76.45 Aligned_cols=61 Identities=26% Similarity=0.397 Sum_probs=55.1
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
...|++|..|.+++||++ | |++||+|++||++++.++++.+++.+++..+ ..+.|+|.|..
T Consensus 33 ~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~ 93 (95)
T 1mfg_A 33 DDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ-NTVELIIVREV 93 (95)
T ss_dssp TCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHHCC-SEEEEEEEEEC
T ss_pred CCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhcCC-CeEEEEEEeCC
Confidence 356899999999999999 8 9999999999999999999999999998764 78999998853
No 79
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.15 E-value=2.6e-10 Score=75.27 Aligned_cols=60 Identities=22% Similarity=0.344 Sum_probs=54.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~ 66 (144)
..|++|..|.++++|+++| |++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|.
T Consensus 31 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~ 90 (91)
T 1m5z_A 31 EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESG-NKLDLVISRN 90 (91)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTST-TEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CEEEEEEEeC
Confidence 4689999999999999999 9999999999999999999999988888764 6899999874
No 80
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.15 E-value=3.3e-10 Score=76.99 Aligned_cols=61 Identities=23% Similarity=0.391 Sum_probs=55.6
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.+++|..|.+++||+++| |+.||+|++||++++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 43 p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g-~~v~l~v~r~~~ 103 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQVVDLIRAGE-KELILTVLSVES 103 (107)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCS-SEEEEEEECSSC
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CEEEEEEEcCCC
Confidence 346799999999999999 9999999999999999999999999999864 799999998664
No 81
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.15 E-value=3.8e-10 Score=75.19 Aligned_cols=63 Identities=32% Similarity=0.403 Sum_probs=56.6
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
...+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++.. ...+.|+|.|...
T Consensus 32 ~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g~ 94 (97)
T 2w4f_A 32 DDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGA-GTAVQMRVWRERE 94 (97)
T ss_dssp TBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS-CSEEEEEEECCSS
T ss_pred CCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC-CCeEEEEEEeCCc
Confidence 35789999999999999999 999999999999999999998888888775 4799999999764
No 82
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=4e-10 Score=76.99 Aligned_cols=63 Identities=32% Similarity=0.398 Sum_probs=57.1
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
...+++|..|.+++||+++| |++||+|++||++++.++++.+++..++.. ...|.|+|.|...
T Consensus 44 ~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 44 DDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGA-GTAVQMRVWRESG 106 (110)
T ss_dssp TCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHSC-CSEEEEEEEECSS
T ss_pred CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhhCC-CCeEEEEEEECCc
Confidence 35789999999999999999 999999999999999999999998888875 4799999999764
No 83
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.15 E-value=2.5e-10 Score=80.16 Aligned_cols=63 Identities=32% Similarity=0.417 Sum_probs=57.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.++.++|+..+ ..+.|+|.|...
T Consensus 58 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 120 (123)
T 2iwq_A 58 MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAG-NPVVFMVQSIIS 120 (123)
T ss_dssp CCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SSEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCc
Confidence 358999999999999999999999999999999999999999999999885 589999988653
No 84
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.15 E-value=2.7e-10 Score=79.59 Aligned_cols=63 Identities=33% Similarity=0.515 Sum_probs=56.9
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r~~ 67 (144)
..+++|..|.+++||+++|+|++||+|++|||+++.++++.+++++|+..+ ...|.|+|.|..
T Consensus 57 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 57 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEECC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 368999999999999999999999999999999999999999999999863 468999998864
No 85
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.15 E-value=2.2e-10 Score=80.73 Aligned_cols=62 Identities=32% Similarity=0.395 Sum_probs=56.9
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+|+..+ ..|.|+|.|...
T Consensus 65 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 126 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANS-RNLIITVRPANQ 126 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHTT-TSEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCc
Confidence 47999999999999999988999999999999999999999999999875 579999988653
No 86
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.15 E-value=2.9e-10 Score=78.24 Aligned_cols=62 Identities=18% Similarity=0.273 Sum_probs=56.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|..
T Consensus 48 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g-~~v~l~v~R~~ 109 (112)
T 2r4h_A 48 NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGG-RRVRLFLKRGE 109 (112)
T ss_dssp TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-TEEEEEEECCE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCC
Confidence 458999999999999999999999999999999999999999999998864 68999998854
No 87
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.15 E-value=1.8e-10 Score=78.17 Aligned_cols=61 Identities=28% Similarity=0.355 Sum_probs=55.7
Q ss_pred CcEEEEEEcCCChhhhc-CCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLD-ARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~-GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.+++|..|.++++|+++ | |++||+|++|||+++.++++.+++.+++..+ ..+.|+|.+...
T Consensus 35 ~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~~~~ 96 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQR-GEIEFEVVYVAL 96 (103)
T ss_dssp EEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHHHHHCC-SEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEecCC
Confidence 47999999999999996 6 9999999999999999999999999999986 689999988654
No 88
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.15 E-value=1.9e-10 Score=78.05 Aligned_cols=61 Identities=23% Similarity=0.280 Sum_probs=55.9
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..|++|..|.+++||+++| |+.||+|++|||+++.++++.+++.+++..+ ..+.|+|.|..
T Consensus 25 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g-~~v~l~v~r~~ 85 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSG-NSVTLLVLDGD 85 (106)
T ss_dssp CCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTT-TEEEEEEECHH
T ss_pred CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CEEEEEEEECC
Confidence 4589999999999999999 9999999999999999999999999998764 79999998854
No 89
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.14 E-value=3.3e-10 Score=75.93 Aligned_cols=60 Identities=18% Similarity=0.132 Sum_probs=55.4
Q ss_pred cEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 7 VIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 7 gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
|++|..|.+++||+++| |+.||+|++|||.++.++++.++..+++..+ ..+.|+|.|...
T Consensus 35 g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g-~~v~l~v~r~~~ 94 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSG-NKISLRTTALEN 94 (99)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSC-SEEEEEEECSCS
T ss_pred CeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC-CEEEEEEEECCC
Confidence 67999999999999999 9999999999999999999999999999764 799999998653
No 90
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.14 E-value=3e-10 Score=75.95 Aligned_cols=60 Identities=23% Similarity=0.359 Sum_probs=55.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~ 66 (144)
..+++|..|.+++||+++| |++||+|++||++++.++++.++..+|+..+ ..+.|+|.+.
T Consensus 36 ~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~~ 95 (96)
T 2ego_A 36 EMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIKASG-NVLRLETLYG 95 (96)
T ss_dssp CEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHTT-TEEEEEEECC
T ss_pred CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEEC
Confidence 3589999999999999999 9999999999999999999999999999985 5899998763
No 91
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.14 E-value=3.3e-10 Score=74.70 Aligned_cols=62 Identities=24% Similarity=0.342 Sum_probs=55.0
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.|++|..|.++++|+++|+|+.||+|++|||+++.++++.++..+++... ..+.|+|.|...
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~g~ 84 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQRDER 84 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-TEEEEEEEC---
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CcEEEEEEeCCc
Confidence 47899999999999999999999999999999999889999999999875 589999998664
No 92
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.14 E-value=2.2e-10 Score=78.25 Aligned_cols=61 Identities=23% Similarity=0.269 Sum_probs=55.6
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.|++|..|.++++|+++| |+.||+|++|||+++.+++|.+++.+++..+ ..+.|+|.|...
T Consensus 45 ~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~~~~~ 105 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNMIRQGG-NTLMVKVVMVTR 105 (109)
T ss_dssp SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHTT-TEEEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CEEEEEEEECCC
Confidence 379999999999999999 9999999999999999999999999999874 689999987543
No 93
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.14 E-value=3.7e-10 Score=77.88 Aligned_cols=62 Identities=19% Similarity=0.379 Sum_probs=56.6
Q ss_pred CCcEEEEEEcCCChhhhcCCc-CCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARL-IPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL-~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.++++|+++| | ++||+|++|||+++.++++.+++++|+..+ ..+.|+|.|...
T Consensus 47 ~~gv~V~~V~~~spA~~aG-ll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 109 (113)
T 1va8_A 47 MDSVIISRIVKGGAAEKSG-LLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH-GTLTFVLIPSSG 109 (113)
T ss_dssp SSSEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-EEEEEEEECCCC
T ss_pred CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCc
Confidence 4689999999999999999 6 999999999999999999999999999876 689999988654
No 94
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.14 E-value=1.9e-10 Score=79.24 Aligned_cols=63 Identities=37% Similarity=0.524 Sum_probs=58.1
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPI 69 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~ 69 (144)
.+++|..|.++++|+++|+|++||+|++||++++.++++.+++.+++..+ ..|.|+|.|....
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTP-QKVRLVVYRDEAH 105 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCC-SEEEEEEECCSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEeCCcc
Confidence 58999999999999999999999999999999999999999999999876 7999999987643
No 95
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.14 E-value=2.6e-10 Score=76.96 Aligned_cols=61 Identities=43% Similarity=0.463 Sum_probs=56.3
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
.|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|..
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~~ 95 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG-QTVTIIAQYKP 95 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC-SEEEEEEEECH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECc
Confidence 48999999999999999999999999999999999999999999999864 78999998853
No 96
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=2.8e-10 Score=75.31 Aligned_cols=62 Identities=39% Similarity=0.537 Sum_probs=56.1
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..+++|..|.++++|+++|.|++||+|++||++++.++++.+++.+++..+ ..+.|+|.|..
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~~ 90 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ-GSVKLVVRSGP 90 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC-SEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEeCC
Confidence 468999999999999999559999999999999999999999999999875 68999998754
No 97
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.12 E-value=2.5e-10 Score=80.23 Aligned_cols=63 Identities=17% Similarity=0.396 Sum_probs=58.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+|+.. ...+.|+|.|...
T Consensus 45 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 45 ASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNA-GQVVHLTLVRRKT 107 (129)
T ss_dssp CCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHC-CSSEEEEEEEESS
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 46899999999999999999999999999999999999999999999984 4789999988664
No 98
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=1.4e-10 Score=78.18 Aligned_cols=62 Identities=16% Similarity=0.271 Sum_probs=56.6
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.+++|..|.++++|+++|+|+.||+|++|||+++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 36 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~~ 97 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGG-RRVRLLLKRGTG 97 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHC-SEECEEEECTTC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCC
Confidence 48999999999999999999999999999999999999999999998654 689999998764
No 99
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=3.5e-10 Score=76.75 Aligned_cols=61 Identities=26% Similarity=0.347 Sum_probs=55.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.++++|+++| |++||+|++|||+++.++++.+++.+|+. . ..+.|+|.|...
T Consensus 40 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~-~~v~l~v~r~~~ 100 (104)
T 1wi2_A 40 QLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-A-REISMRVRFFSG 100 (104)
T ss_dssp CCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-S-SSEEEEEECCCC
T ss_pred CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-C-CEEEEEEEECCC
Confidence 3589999999999999999 99999999999999999999999999998 3 589999988653
No 100
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=2.1e-10 Score=76.46 Aligned_cols=62 Identities=18% Similarity=0.329 Sum_probs=57.3
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++| |++||+|++||++++.++++.++..+++..+ ..+.|+|.|...
T Consensus 29 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~g~ 90 (94)
T 1vb7_A 29 HTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSA-SPLRLQLDRSSG 90 (94)
T ss_dssp TEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SSEEEEEECCCC
T ss_pred CCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEECCc
Confidence 3589999999999999999 9999999999999999999999999999886 789999999764
No 101
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.12 E-value=1.6e-10 Score=76.47 Aligned_cols=62 Identities=19% Similarity=0.256 Sum_probs=54.3
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.+++||+++| |++||+|++|||+++.++++.++..+|+.. ...+.|+|.|...
T Consensus 26 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 87 (91)
T 2vsp_A 26 LPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSS-GKNVTLLVCGKKA 87 (91)
T ss_dssp CSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS-CSEEEEEEEC---
T ss_pred CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEeCCc
Confidence 4588999999999999999 999999999999999989999999999987 5799999998653
No 102
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.11 E-value=2.7e-10 Score=75.64 Aligned_cols=60 Identities=18% Similarity=0.251 Sum_probs=53.8
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
.+++|..|.+++||+++| |++||+|++|||+++.+++|.++..+|+..+ ..+.+.+.|..
T Consensus 29 ~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~~~~~~~r~~ 88 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGG-DQTTLLVLDKE 88 (95)
T ss_dssp CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTT-TEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEECCc
Confidence 489999999999999999 9999999999999999999999999999975 67777766644
No 103
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.11 E-value=5.6e-10 Score=71.62 Aligned_cols=60 Identities=25% Similarity=0.374 Sum_probs=54.5
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~ 66 (144)
.|++|..|.++++|+++|+|++||+|++||++++.++++.++..+++... ..+.|+|.|.
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 80 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQRD 80 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTST-TEEEEEEEC-
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CeEEEEEEeC
Confidence 47899999999999999999999999999999999889999999999875 5899999874
No 104
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.11 E-value=2.6e-10 Score=76.36 Aligned_cols=60 Identities=22% Similarity=0.261 Sum_probs=54.2
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~ 66 (144)
.|++|..|.+++||+++| |++||+|++|||+++.++++.++.++|+..+...+.|+|.|.
T Consensus 33 ~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~ 92 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRE 92 (98)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCHH
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECC
Confidence 489999999999999999 999999999999999999999999999988544667888764
No 105
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.11 E-value=3.1e-10 Score=83.69 Aligned_cols=63 Identities=37% Similarity=0.569 Sum_probs=58.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 129 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~ 191 (196)
T 3gsl_A 129 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY-DVVYLKVAKPSN 191 (196)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCC-EEEEEEEEEESC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCC-CeEEEEEeCCCC
Confidence 468999999999999999999999999999999999999999999999874 789999998654
No 106
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.10 E-value=2.6e-10 Score=77.04 Aligned_cols=61 Identities=26% Similarity=0.397 Sum_probs=55.6
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
...|++|..|.+++||++ | |++||+|++||++++.++++.+++.+++..+ ..+.|+|.|..
T Consensus 41 ~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~ 101 (103)
T 1n7t_A 41 DDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ-NTVELIIVREV 101 (103)
T ss_dssp SCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHHHHHCC-SEEEEEEECCC
T ss_pred CCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHHhhcCC-CeEEEEEEecC
Confidence 356899999999999999 8 9999999999999999999999999998764 78999999864
No 107
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.10 E-value=3.2e-10 Score=78.92 Aligned_cols=61 Identities=23% Similarity=0.359 Sum_probs=54.4
Q ss_pred cEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC---CCCeEEEEEEcCC
Q psy3208 7 VIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA---PRGIVKIGVAKPL 67 (144)
Q Consensus 7 gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~---~~~~V~L~V~r~~ 67 (144)
.++|.+|.+++||+++|.|++||+|++|||+++.+++|++++++|+.. ....|.|+|.|..
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~~ 107 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCP 107 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeCC
Confidence 499999999999999944999999999999999999999999999865 2368999999854
No 108
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=3.6e-10 Score=75.12 Aligned_cols=61 Identities=21% Similarity=0.283 Sum_probs=55.1
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..+++|..|.+++||+++|.|++||+|++||++++ +.+++++.++|+..+ ..+.|+|.|..
T Consensus 28 ~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~-~~v~l~v~~~~ 88 (91)
T 2e7k_A 28 GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNAS-GSVILKILSGP 88 (91)
T ss_dssp SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCC-SSBCEEEECCS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 35899999999999999877999999999999999 889999999999874 68999998754
No 109
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.10 E-value=5.1e-10 Score=74.43 Aligned_cols=61 Identities=26% Similarity=0.446 Sum_probs=54.9
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
+.+++|..|.+++||+++| |+.||+|++||++++.++++.+++..++. ...+.|+|.|...
T Consensus 28 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~--g~~v~l~v~R~~~ 88 (93)
T 2dls_A 28 DRIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKS--GAYVALTLLGSSS 88 (93)
T ss_dssp SSSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHTS--SSEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC--CCEEEEEEEECCC
Confidence 4589999999999999999 99999999999999999999988888874 3699999999764
No 110
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=3.2e-10 Score=75.52 Aligned_cols=62 Identities=23% Similarity=0.312 Sum_probs=55.8
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.+++||+++| |++||+|++||++++.++++.++..+++..+ ..+.|+|.|...
T Consensus 31 ~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~g~ 92 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCH-DHLTLSVSSGPS 92 (94)
T ss_dssp TSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCC-SCEEEEEECCSS
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCC
Confidence 4579999999999999999 9999999999999999999999999998854 689999988653
No 111
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=2e-10 Score=79.70 Aligned_cols=62 Identities=24% Similarity=0.345 Sum_probs=55.8
Q ss_pred CcEEEEEEcCCChhhhc--CCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCC---CeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLD--ARLIPGDRLLSVNETDLNNASLDQAVQALKGAPR---GIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~--GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~---~~V~L~V~r~~~ 68 (144)
.|++|..|.++++|+++ | |++||+|++|||+++.+++|.+++.+++..+. ..+.|+|.|...
T Consensus 41 ~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcccc
Confidence 37999999999999999 6 99999999999999999999999999988742 379999998654
No 112
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.09 E-value=2.3e-10 Score=79.20 Aligned_cols=62 Identities=37% Similarity=0.490 Sum_probs=55.6
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
...|++|..|.++++|+ +| |++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 44 ~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~ 105 (117)
T 2csj_A 44 GETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLRKSG-KIAAIVVKRPRK 105 (117)
T ss_dssp CCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHHHSC-SEEEEEEEEEEE
T ss_pred CCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHhcCC-CeEEEEEEECCc
Confidence 35689999999999997 67 9999999999999999999999999999864 799999988654
No 113
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=7.3e-10 Score=74.53 Aligned_cols=61 Identities=21% Similarity=0.293 Sum_probs=55.6
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++| |++||+|++||++++.++++.+++..++. . ..+.|+|.|...
T Consensus 35 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~-~~v~l~v~R~g~ 95 (100)
T 2eeh_A 35 GLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-S-SRLHMMVRRMGS 95 (100)
T ss_dssp TCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-C-SSEEEEEEECSC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-C-CEEEEEEEECCc
Confidence 3589999999999999999 99999999999999999989999999987 3 689999998764
No 114
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.09 E-value=1.2e-10 Score=75.69 Aligned_cols=60 Identities=25% Similarity=0.459 Sum_probs=54.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~ 66 (144)
..|++|..|.++++|+++| |+.||+|++|||+++.++++.++..+++..+ ..+.|+|.|.
T Consensus 22 ~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 81 (83)
T 2kv8_A 22 QAPCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCS-GVLHMVIAEG 81 (83)
T ss_dssp SSSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCS-SCEEEEEECC
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEcC
Confidence 3478999999999999999 9999999999999999999999999998775 6799999885
No 115
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.09 E-value=5.3e-10 Score=75.41 Aligned_cols=62 Identities=18% Similarity=0.254 Sum_probs=56.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++| |+.||+|++|||+++.++++.++..+++..+ ..+.|+|.|...
T Consensus 29 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g-~~v~l~v~r~~~ 90 (102)
T 2d90_A 29 QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGG-DQTTLLVLDKEA 90 (102)
T ss_dssp SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHST-TEEEEEECSTTC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CEEEEEEEECCC
Confidence 4689999999999999999 9999999999999999999999999998864 699999987653
No 116
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.09 E-value=5.9e-10 Score=73.95 Aligned_cols=62 Identities=23% Similarity=0.363 Sum_probs=56.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..+++|..|.++++|+++|+|++||+|++|||+++.++++.++..+++.. ...+.|+|.|..
T Consensus 32 ~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~r~g 93 (97)
T 2iwn_A 32 PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT-GQTVLLTLMRRG 93 (97)
T ss_dssp CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTC-CSEEEEEEEEEE
T ss_pred CCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 46899999999999999999999999999999999999999999998885 478999998754
No 117
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.09 E-value=2.3e-10 Score=77.17 Aligned_cols=61 Identities=16% Similarity=0.229 Sum_probs=55.7
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.+++|..|.++++|+++| |++||+|++||++++.++++.++..+++..+ ..+.|+|.|...
T Consensus 36 ~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~ 96 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCP-SEIILLVWRVSG 96 (100)
T ss_dssp SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCS-SEEEEEEEECCS
T ss_pred CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCC
Confidence 578999999999999999 9999999999999999999999999999875 579999988654
No 118
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.08 E-value=3.8e-10 Score=77.73 Aligned_cols=62 Identities=23% Similarity=0.291 Sum_probs=56.7
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
...|++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++.. ...+.|+|.|..
T Consensus 36 ~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~ 97 (114)
T 2edz_A 36 DTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKS-GNSVTLLVLDGD 97 (114)
T ss_dssp TCCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHT-CSEEEEEEECHH
T ss_pred CCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEECC
Confidence 34689999999999999999 999999999999999999999999999886 479999999854
No 119
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.07 E-value=5.5e-10 Score=77.97 Aligned_cols=64 Identities=17% Similarity=0.261 Sum_probs=58.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r~~~ 68 (144)
..+++|..|.++++|+++|+|++||+|++||++++.+++++++.++|+... ...+.|+|.|...
T Consensus 44 ~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 44 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVA 108 (122)
T ss_dssp SSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred CCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECCc
Confidence 457899999999999999999999999999999999999999999999874 4689999998664
No 120
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.07 E-value=1.2e-09 Score=74.09 Aligned_cols=62 Identities=32% Similarity=0.399 Sum_probs=54.5
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
...+++|..|.+++||+ +| |++||+|++|||+++.++++.+++..++..+ ..+.|+|.|...
T Consensus 37 ~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~~ 98 (107)
T 2h2b_A 37 GETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLRKSG-KNAKITIRRKKG 98 (107)
T ss_dssp CCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEEESC
T ss_pred CCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhhCCC-CEEEEEEEECCC
Confidence 45699999999999999 88 9999999999999999999988887777654 689999988654
No 121
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=1.1e-09 Score=75.69 Aligned_cols=64 Identities=22% Similarity=0.225 Sum_probs=55.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPIP 70 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~~ 70 (144)
+.|++|..|.++++|+++| |++||+|++|||+++.++++.+++.+++.. ...+.|+|.|.....
T Consensus 41 ~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~r~~~~~ 104 (117)
T 1uit_A 41 KGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQ-CDTITILAQYNPHVH 104 (117)
T ss_dssp TSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSC-CSEEEEEECCCSCCC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECCchh
Confidence 4589999999999999999 999999999999999999988887666654 478999999876543
No 122
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.07 E-value=7e-10 Score=77.98 Aligned_cols=62 Identities=26% Similarity=0.287 Sum_probs=55.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHc-CCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKG-APRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~-~~~~~V~L~V~r~~ 67 (144)
+.|++|..|.+++||+++| |++||+|++|||+++.++++.++..+|+. .....+.|+|.|..
T Consensus 50 ~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 50 DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 112 (124)
T ss_dssp TSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECH
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 4689999999999999999 99999999999999999999999998885 33468999998864
No 123
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=1.5e-10 Score=81.35 Aligned_cols=61 Identities=20% Similarity=0.347 Sum_probs=56.4
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.+++|..|.+++||+++| |++||+|++||++++.++++.+++.+|+.. ...|.|+|.|...
T Consensus 61 ~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAG-LCTGDRIIKVNGESVIGKTYSQVIALIQNS-DTTLELSVMPKDS 121 (126)
T ss_dssp CCCCBCCCCSSSHHHHHT-CCSSCCCCEETTEECSSCCHHHHHHHHHTC-TTEEEEECCCCCC
T ss_pred CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEECCC
Confidence 579999999999999999 999999999999999999999999999987 4799999988654
No 124
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.06 E-value=6.1e-10 Score=83.33 Aligned_cols=63 Identities=29% Similarity=0.469 Sum_probs=57.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|+.+
T Consensus 135 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~-~~v~L~V~R~~~ 197 (206)
T 3r0h_A 135 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGAN-GKVSMEVTRPKP 197 (206)
T ss_dssp SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEEECC
T ss_pred CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCC
Confidence 457999999999999999999999999999999999999999999999875 799999998654
No 125
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.06 E-value=6.4e-10 Score=76.59 Aligned_cols=60 Identities=25% Similarity=0.272 Sum_probs=55.1
Q ss_pred cEEEEEEcCCChhhh-cCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 7 VIVIRSLVPGGVAQL-DARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 7 gi~Is~V~~gg~A~~-~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
+++|..|.++++|++ +| |++||+|++||++++.++++.++.++|+.. ...+.|+|.|...
T Consensus 44 ~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 104 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKLIKDA-GLSVTLRIIPQEE 104 (114)
T ss_dssp SCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHHHHHT-TTEEEEEECCCSC
T ss_pred CeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 679999999999999 88 999999999999999999999999999985 4799999998764
No 126
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=3.6e-10 Score=80.15 Aligned_cols=62 Identities=24% Similarity=0.366 Sum_probs=56.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEcC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAKP 66 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r~ 66 (144)
..+++|..|.+++||+++|+|++||+|++|||.++.+.+|.+++++|+... ...|.|+|.|.
T Consensus 48 ~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 48 GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 357899999999999999999999999999999999889999999999843 46899999997
No 127
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.04 E-value=1.3e-09 Score=74.57 Aligned_cols=66 Identities=26% Similarity=0.381 Sum_probs=58.6
Q ss_pred CCcEEEEEEcCCChhhhcCCc-CCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARL-IPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPIPD 71 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL-~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~~~ 71 (144)
..+++|..|.+++||+++| | +.||+|++|||+++.++++.++..+++......+.|+|.|......
T Consensus 25 ~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~ 91 (112)
T 1qau_A 25 KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGFT 91 (112)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEECCTTSE
T ss_pred CCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEeCCcccc
Confidence 3589999999999999999 7 9999999999999999999999999988655689999999775433
No 128
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=7e-10 Score=75.20 Aligned_cols=62 Identities=21% Similarity=0.342 Sum_probs=56.3
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++| |++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|...
T Consensus 31 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~~~ 92 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSG-SRVMFLLVDKET 92 (106)
T ss_dssp CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHC-SEEEEEECCTTT
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEcCch
Confidence 4689999999999999999 9999999999999999999999999998764 689999988654
No 129
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.03 E-value=4.2e-10 Score=76.23 Aligned_cols=61 Identities=21% Similarity=0.340 Sum_probs=56.6
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.+++|..|.+++||+++| |++||+|++||++++.++++.++..+|+.. ...+.|+|.|...
T Consensus 29 ~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAA-SYQLCLKIDRAET 89 (103)
T ss_dssp EEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTC-CSEEECEECCCTT
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEECCe
Confidence 479999999999999999 999999999999999999999999999987 5799999998765
No 130
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=1.5e-09 Score=76.11 Aligned_cols=66 Identities=29% Similarity=0.337 Sum_probs=57.7
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCCCCCcc
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPIPDSSC 74 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~~~~~~ 74 (144)
.|++|..|.++++|+++| |++||+|++|||+++.++++.++++.++.. ..+.|+|.|........+
T Consensus 46 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~--~~v~l~v~R~g~~~~~~v 111 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS--RHLILTVKDVGRLPHART 111 (128)
T ss_dssp CCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC--SEEEEEEECCSCCSSCSC
T ss_pred CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC--CeEEEEEEECCccccccc
Confidence 489999999999999999 999999999999999999998888888875 489999999776544433
No 131
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=1.3e-09 Score=72.65 Aligned_cols=55 Identities=24% Similarity=0.430 Sum_probs=51.2
Q ss_pred EEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEc
Q psy3208 9 VIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAK 65 (144)
Q Consensus 9 ~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r 65 (144)
+|..|.++++|+++| |++||+|++|||+++.++++.++.++|+..+ ..+.|+|.+
T Consensus 34 ~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g-~~v~l~v~p 88 (90)
T 1y7n_A 34 IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAV-GEIHMKTMP 88 (90)
T ss_dssp EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCC-EEEEEEEEC
T ss_pred EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEE
Confidence 899999999999999 9999999999999999999999999999774 688998874
No 132
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=2.2e-09 Score=71.99 Aligned_cols=60 Identities=18% Similarity=0.256 Sum_probs=53.1
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r~~~ 68 (144)
.|++|..|.++ |+++| |++||+|++||++++.+++|.+++++|+..+ ...|.|+|.|...
T Consensus 32 ~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 32 TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCSS
T ss_pred CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCC
Confidence 47899999984 67788 9999999999999999999999999999864 4799999999764
No 133
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.01 E-value=1.4e-09 Score=80.77 Aligned_cols=59 Identities=27% Similarity=0.403 Sum_probs=55.3
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEc
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAK 65 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r 65 (144)
...|++|..|.++++|++ | |++||+|++|||+++.+++|.+++.+++..+ ..|.|+|.|
T Consensus 22 ~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r 80 (195)
T 2qbw_A 22 DDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ-NTVELIIVR 80 (195)
T ss_dssp TCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEEEE
T ss_pred CCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEE
Confidence 457999999999999999 8 9999999999999999999999999999986 699999988
No 134
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.01 E-value=1.6e-09 Score=74.89 Aligned_cols=61 Identities=43% Similarity=0.463 Sum_probs=55.7
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
.|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|..
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~~ 98 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG-QTVTIIAQYKP 98 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC-SEEEEEEEECH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 58999999999999999999999999999999999999988888888764 68999998754
No 135
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.01 E-value=1.7e-09 Score=79.68 Aligned_cols=63 Identities=40% Similarity=0.586 Sum_probs=58.1
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|..+
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~r~~~ 96 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG-SIVRLYVMRRKP 96 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC-SEEEEEEEEECC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEecCC
Confidence 568999999999999999999999999999999999999999999998875 789999988664
No 136
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.00 E-value=7.9e-10 Score=76.42 Aligned_cols=64 Identities=22% Similarity=0.238 Sum_probs=56.9
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPI 69 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~ 69 (144)
..+++|..|.++++|+++| |+.||+|++|||+++.++++.++.++|+..+...+.|+|.|..+.
T Consensus 35 ~~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~~~~~ 98 (111)
T 1vae_A 35 NTPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSLLDS 98 (111)
T ss_dssp SSSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEECEECC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEecCCC
Confidence 3578899999999999999 999999999999999988999999999988655799999886543
No 137
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.00 E-value=2.5e-09 Score=74.02 Aligned_cols=61 Identities=20% Similarity=0.270 Sum_probs=55.1
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
.+++|..|.++++|+++|+|++||+|++|||+++.+.++.++.++++..+ ..+.|+|.+..
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~~~ 110 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK-GEVTIHYNKLQ 110 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEecc
Confidence 47999999999999999999999999999999998889999999999875 57889887643
No 138
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.99 E-value=2.4e-09 Score=70.16 Aligned_cols=60 Identities=17% Similarity=0.205 Sum_probs=50.3
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~ 67 (144)
..+++|..+ +++||+ +| |++||+|++|||+++.++++.+++.+++.. ....+.|+|.|..
T Consensus 26 ~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 26 GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQT 86 (88)
T ss_dssp SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEEC
T ss_pred CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeCC
Confidence 458899887 999999 88 999999999999999999999999999853 3468999998854
No 139
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=8.6e-10 Score=74.22 Aligned_cols=61 Identities=30% Similarity=0.421 Sum_probs=53.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++| |++||+|++||++++.++++.+++..++.. ..+.|+|.|...
T Consensus 34 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~--~~v~l~v~R~g~ 94 (101)
T 1uez_A 34 GVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGS--KKLVLSVYSAGR 94 (101)
T ss_dssp TCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSS--SSCCEEECCCCC
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcCC--CeEEEEEEECCc
Confidence 4589999999999999999 999999999999999999997777766554 478899988654
No 140
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=9.9e-10 Score=74.05 Aligned_cols=60 Identities=27% Similarity=0.404 Sum_probs=53.7
Q ss_pred CcEEEEEEcCCChhhhc-CCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLD-ARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~-GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.+++|..|.+++||+++ | |++||+|++||++++.++ +.+++.+++..+ ..+.|+|.|...
T Consensus 35 ~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~-~~~~~~~~~~~~-~~v~l~v~R~~~ 95 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGS-RQEALILIKGSF-RILKLIVRRRNS 95 (100)
T ss_dssp EEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSC-SHHHHHHHHTCC-SSCEEEEEECCC
T ss_pred CCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccch-HHHHHHHHHhCC-CeEEEEEEeCCC
Confidence 47899999999999999 6 999999999999999887 788999999874 689999998753
No 141
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.99 E-value=1.1e-09 Score=71.99 Aligned_cols=62 Identities=19% Similarity=0.250 Sum_probs=53.6
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~ 67 (144)
..|++|..|.+++||+++| |++||+|++|||+++.+.++.++..+++.. ....+.|+|.|..
T Consensus 27 ~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 27 IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 3589999999999999999 999999999999999777889999888853 2368999998753
No 142
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.99 E-value=1.4e-09 Score=73.69 Aligned_cols=57 Identities=19% Similarity=0.290 Sum_probs=52.6
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEE
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGV 63 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V 63 (144)
..+++|..|.++++|+++| |++||+|++|||+++.++++.+++++|+..+ ..|.|+|
T Consensus 47 ~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v 103 (104)
T 2z17_A 47 EMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRSSG-NLLTIET 103 (104)
T ss_dssp SCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHHTT-TEEEEEC
T ss_pred CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCC-CcEEEEE
Confidence 4589999999999999999 9999999999999999999999999999986 5788775
No 143
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=6.3e-10 Score=74.56 Aligned_cols=60 Identities=27% Similarity=0.460 Sum_probs=54.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..+++|..|.++++|+ +| |++||+|++|||+++.++++.+++.+++..+ ..+.|+|.|..
T Consensus 30 ~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~ 89 (96)
T 2edv_A 30 SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAE-DSLSITVVRCT 89 (96)
T ss_dssp SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCS-SCEEEEEEECC
T ss_pred CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 4589999999999995 77 9999999999999999999999999999864 78999999976
No 144
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.97 E-value=2.5e-09 Score=74.75 Aligned_cols=62 Identities=21% Similarity=0.252 Sum_probs=55.9
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..|++|..|.++++|+++| |+.||+|++|||+++.++++.++..+|+......+.|+|.|..
T Consensus 32 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g 93 (128)
T 2kjd_A 32 KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRET 93 (128)
T ss_dssp SCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHHH
T ss_pred CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeCC
Confidence 3489999999999999999 9999999999999999999999999999886457789998754
No 145
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.97 E-value=1.9e-09 Score=80.72 Aligned_cols=61 Identities=20% Similarity=0.299 Sum_probs=56.3
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.++++|+++| |++||+|++|||.++.++++.+++.+++. + ..+.|+|.|...
T Consensus 109 ~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~-~~v~l~v~r~g~ 169 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-E-KTVSIKVRHIGL 169 (192)
T ss_dssp TEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-S-SEEEEEEEECCE
T ss_pred CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-C-CeEEEEEEECCc
Confidence 3589999999999999999 99999999999999999999999999988 4 799999998764
No 146
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.97 E-value=3.7e-09 Score=83.51 Aligned_cols=63 Identities=38% Similarity=0.440 Sum_probs=57.3
Q ss_pred CCcEEEEEEcCCChhhh-cCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQL-DARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPI 69 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~-~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~ 69 (144)
..|++|..|.++++|++ +| |++||+|++|||+++.+++|.+++.+|+..+ ..|.|+|.|....
T Consensus 102 ~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g-~~V~L~V~R~~~~ 165 (263)
T 1z87_A 102 KMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKTG-KEVVLEVKYMKEV 165 (263)
T ss_dssp TEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHHHHCC-SCCCEEEECCSSS
T ss_pred CCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHHhcCC-CeEEEEEEeCccc
Confidence 36899999999999999 46 9999999999999999999999999999985 6899999996653
No 147
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=1.1e-09 Score=74.80 Aligned_cols=61 Identities=39% Similarity=0.456 Sum_probs=55.8
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
.+++|..|.++++|+++|+|++||+|++||++++.++++.++..+++... ..+.|+|.|..
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~~ 99 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAG-QSVTIVAQYRP 99 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCC-SEEEEEEECCH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEECc
Confidence 68999999999999999999999999999999999999999999998764 78999998754
No 148
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.97 E-value=3.1e-09 Score=79.40 Aligned_cols=64 Identities=23% Similarity=0.214 Sum_probs=58.0
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCC--CCHHHHHHHHHcCCCCeEEEEEEcCCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNN--ASLDQAVQALKGAPRGIVKIGVAKPLPI 69 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~--~t~~e~v~ll~~~~~~~V~L~V~r~~~~ 69 (144)
.|++|..|.++++|+++|+|+.||+|++|||+++.+ ++|.+++.+++..+...+.|+|.|....
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 110 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRADPP 110 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECCSSC
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEecccC
Confidence 589999999999999998899999999999999999 9999999999988644499999987653
No 149
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.96 E-value=3.6e-09 Score=73.78 Aligned_cols=60 Identities=20% Similarity=0.217 Sum_probs=52.2
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r~~~ 68 (144)
.|.+|.+|.+ ++..+| |++||+|++|||+++.+++|.+++++|+.++ ...|.|+|.|...
T Consensus 34 ~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 34 TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGP 94 (113)
T ss_dssp TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSC
T ss_pred CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCc
Confidence 4678999988 466666 9999999999999999999999999999875 3589999999775
No 150
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=3.6e-09 Score=73.94 Aligned_cols=62 Identities=26% Similarity=0.404 Sum_probs=55.1
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPI 69 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~ 69 (144)
.|++|..|.++++|+++|+|++||+|++|||+++.+ +.++..+|+..+...|.|+|.|....
T Consensus 48 ~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 48 IGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSEENKNFSLLIARPELQ 109 (124)
T ss_dssp CCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTCSSCCSCCEEEEECSSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCEEEEEEEECCEE
Confidence 689999999999999999999999999999999974 68899999886546899999997754
No 151
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.95 E-value=1.8e-09 Score=75.60 Aligned_cols=63 Identities=27% Similarity=0.413 Sum_probs=57.4
Q ss_pred CcEEEEEEcCCChhhhcCCc-CCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARL-IPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPI 69 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL-~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~ 69 (144)
.+++|..|.++++|+++| | +.||+|++|||+++.++++.++.++|+......+.|+|.|....
T Consensus 33 ~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~ 96 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEG 96 (127)
T ss_dssp SCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEECCCCS
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEeCCce
Confidence 589999999999999999 7 99999999999999999999999999987556899999997653
No 152
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.94 E-value=4.6e-09 Score=70.98 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=51.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEc
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAK 65 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r 65 (144)
..+++|..|.+++||+++| |+.||+|++|||+++.+++++++.+++++ ..+.|+|..
T Consensus 34 ~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~---~~l~ltV~~ 90 (94)
T 3kzd_A 34 IRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ---PSLGLLVRT 90 (94)
T ss_dssp SCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS---SEEEEEEEE
T ss_pred cCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC---CeEEEEEEe
Confidence 4589999999999999999 99999999999999999999999999884 368888765
No 153
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=2.7e-09 Score=74.16 Aligned_cols=58 Identities=17% Similarity=0.183 Sum_probs=52.7
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
.+++|..|.++++|+++| |++||+|++|||+++.++++.++.++++. ..+.|+|.|..
T Consensus 44 ~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~---~~v~l~v~R~p 101 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ---PSLGLLVRTYP 101 (114)
T ss_dssp EEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS---SEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC---CcEEEEEEECC
Confidence 479999999999999999 99999999999999999989999998875 37999998854
No 154
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.91 E-value=4.5e-09 Score=73.37 Aligned_cols=62 Identities=18% Similarity=0.314 Sum_probs=56.8
Q ss_pred CCcEEEEEEcC--CChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVP--GGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~--gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+ +++|+++| |+.||+|++|||+.+.++++.++..+|+.. ...+.|+|.|...
T Consensus 43 ~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~-g~~v~l~v~R~g~ 106 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQT-SQTLQLLIEHDPV 106 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCC-SSCEEEEEEECSS
T ss_pred CCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhC-CCEEEEEEEECCE
Confidence 46899999999 99999999 999999999999999999999999999987 5789999998764
No 155
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.89 E-value=8.8e-10 Score=73.63 Aligned_cols=64 Identities=14% Similarity=0.185 Sum_probs=53.3
Q ss_pred cEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCCCCCCCcc
Q psy3208 7 VIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPLPIPDSSC 74 (144)
Q Consensus 7 gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~~~~~~~~ 74 (144)
|++|..|.+++||++ | |++||+|++|||+++.++ .++..+|+.. +...+.|+|.|........+
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 66 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQSA--EKLIDYISSKKAGDKVTLKIEREEKEKRVTL 66 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSSH--HHHHHHHSSCCSSCEECEEEESSSCEECCCE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCCH--HHHHHHHHcCCCCCEEEEEEEECCEEEEEEE
Confidence 688999999999999 8 999999999999999754 7888888876 34689999999775444333
No 156
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.89 E-value=6e-09 Score=71.34 Aligned_cols=59 Identities=22% Similarity=0.353 Sum_probs=52.4
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC--CCCeEEEEEEc
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA--PRGIVKIGVAK 65 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~--~~~~V~L~V~r 65 (144)
.+.+|..|.+++||+++| |++||+|++|||.++...+++++..+++.. ..+++.|.|+.
T Consensus 39 ~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~ 99 (101)
T 3qik_A 39 KAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVAT 99 (101)
T ss_dssp TEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEec
Confidence 467899999999999999 999999999999999878899999999873 34689988874
No 157
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.87 E-value=1.1e-08 Score=76.29 Aligned_cols=62 Identities=29% Similarity=0.426 Sum_probs=57.1
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..+++|..|.++++|+++|+|++||+|++||++++.+++++++.++|+.. ...+.|+|.|..
T Consensus 134 ~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 195 (200)
T 2qt5_A 134 SRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC-GQEATLLIEYDV 195 (200)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT-CSEEEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECC
Confidence 46899999999999999999999999999999999999999999999984 579999998864
No 158
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.86 E-value=6.6e-09 Score=70.07 Aligned_cols=62 Identities=13% Similarity=0.102 Sum_probs=52.3
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCCCC
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPLPI 69 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~~~ 69 (144)
...|++|..|.+++||+. | |++||+|++|||+++.++ .++..++... ....+.|+|.|....
T Consensus 5 ~~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 67 (100)
T 3i18_A 5 TYDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKSS--QEFIDYIHSKKVGDTVKINYKHGDKN 67 (100)
T ss_dssp CCCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSSH--HHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred eCCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 457999999999999995 8 999999999999999654 7788888864 346899999987653
No 159
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.85 E-value=6.8e-09 Score=71.21 Aligned_cols=59 Identities=27% Similarity=0.416 Sum_probs=53.6
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~ 66 (144)
..|++|..|.++++|+++| |++||+|++||++++.++.+.+++.+++.. ..+.|+|.|.
T Consensus 40 ~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~--~~v~l~v~r~ 98 (114)
T 1x5n_A 40 KPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS--RSLTISIVAA 98 (114)
T ss_dssp SCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC--SSEEEEECSS
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC--CeEEEEEEcC
Confidence 3589999999999999999 999999999999999999988888888875 4789999886
No 160
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.84 E-value=9.5e-09 Score=85.04 Aligned_cols=62 Identities=26% Similarity=0.287 Sum_probs=56.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHc-CCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKG-APRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~-~~~~~V~L~V~r~~ 67 (144)
+.|++|..|.+++||+++| |++||+|++|||+++.++++++++.+|+. .....|.|+|.|..
T Consensus 30 ~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~ 92 (391)
T 3tsz_A 30 DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 92 (391)
T ss_dssp TTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECH
T ss_pred CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCC
Confidence 4689999999999999999 99999999999999999999999999996 34468999998854
No 161
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.82 E-value=1.6e-08 Score=75.41 Aligned_cols=64 Identities=17% Similarity=0.261 Sum_probs=58.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r~~~ 68 (144)
..+++|..|.+++||+++|+|+.||+|++|||+++.++++.++..+|+... ...+.|+|.|...
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVA 99 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEECSC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecCC
Confidence 467999999999999999999999999999999999889999999999884 3689999988764
No 162
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.82 E-value=1.2e-08 Score=86.42 Aligned_cols=62 Identities=26% Similarity=0.279 Sum_probs=56.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~ 67 (144)
..|++|..|.+++||+++| |++||+|++|||+++.++++.+++.+|+.. ....|.|+|.|..
T Consensus 22 ~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g 84 (468)
T 3shw_A 22 DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 84 (468)
T ss_dssp TTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECH
T ss_pred cCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 4689999999999999999 999999999999999999999999999983 3468999998854
No 163
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.81 E-value=1.8e-08 Score=75.14 Aligned_cols=62 Identities=27% Similarity=0.335 Sum_probs=56.0
Q ss_pred CCcEEEEEEcCCChhhhc-CCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLD-ARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~-GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.++++|+++ | |+.||+|++|||+++.+++|.++..+++..+ ..|.|+|.|..+
T Consensus 32 ~~~~~V~~v~~~spA~~agg-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-~~v~l~v~R~~~ 94 (200)
T 2qt5_A 32 DGKPRVSNLRQGGIAARSDQ-LDVGDYIKAVNGINLAKFRHDEIISLLKNVG-ERVVLEVEYELP 94 (200)
T ss_dssp SSCSEEEEECTTSHHHHTTS-CCTTCEEEEETTEECTTSCHHHHHHHHHTCC-SEEEEEEEEECC
T ss_pred CCCeEEEEECCCChHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEeccCC
Confidence 357899999999999999 6 9999999999999999999999999998875 689999988654
No 164
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.80 E-value=2.8e-08 Score=72.30 Aligned_cols=61 Identities=23% Similarity=0.253 Sum_probs=53.8
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~ 66 (144)
..|++|..|.+++||+++| |+.||+|++|||+++.+++++....+++......+.|+|.+.
T Consensus 26 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~ 86 (166)
T 1w9e_A 26 DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDR 86 (166)
T ss_dssp TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECC
T ss_pred CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcC
Confidence 3589999999999999999 999999999999999999886777888877656899999554
No 165
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.80 E-value=5.1e-09 Score=70.02 Aligned_cols=60 Identities=18% Similarity=0.285 Sum_probs=51.8
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||++ | |+.||+|++|||.++.++ .++..+++.. ....+.|+|.|...
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~ 64 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINTS--EQIVSYVREKQAGDRVRVTFIRDRK 64 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCCH--HHHHHHHHHSCTTCCEEEEEEETTE
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECCE
Confidence 46899999999999998 8 999999999999999754 7788888875 34689999999764
No 166
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.79 E-value=1.6e-08 Score=75.41 Aligned_cols=62 Identities=31% Similarity=0.488 Sum_probs=57.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.++++.++.++|+.. ...+.|+|.|..
T Consensus 134 ~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 195 (196)
T 1p1d_A 134 GDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC-EDLVKLKIRKDE 195 (196)
T ss_dssp TCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC-TTCEEEEEECCC
T ss_pred CCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeCC
Confidence 45899999999999999999999999999999999998899999999988 579999998864
No 167
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.21 E-value=1.1e-09 Score=75.76 Aligned_cols=57 Identities=30% Similarity=0.443 Sum_probs=50.8
Q ss_pred CcEEEEEEcCCChhhh-cCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEE
Q psy3208 6 TVIVIRSLVPGGVAQL-DARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVA 64 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~-~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~ 64 (144)
.|++|..|.+++||++ +| |++||+|++|||+++.++++.+++.+++..+ ..+.|+|.
T Consensus 53 ~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~-~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQR-GEIEFEVV 110 (112)
Confidence 4799999999999999 77 9999999999999999999999999998775 46777764
No 168
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.71 E-value=2.9e-08 Score=87.57 Aligned_cols=63 Identities=40% Similarity=0.586 Sum_probs=58.2
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|+.||+|++|||+++.+++|.+++.+++..+ ..|.|+|.|...
T Consensus 88 ~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g-~~v~l~v~R~~~ 150 (721)
T 2xkx_A 88 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG-SIVRLYVMRRKP 150 (721)
T ss_pred CCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhccc-cccceEEEeccc
Confidence 578999999999999999999999999999999999999999999999875 689999988664
No 169
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.70 E-value=1.6e-08 Score=66.50 Aligned_cols=59 Identities=19% Similarity=0.300 Sum_probs=50.1
Q ss_pred cEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 7 VIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 7 gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
+++|..|.++++|+++| |+.||+|++|||+.+.++ .++...++......+.|+|.|...
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~g~ 63 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQW--VTFVMLVRDNPGXSLALEIERQGS 63 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCCH--HHHHHHHHHCTTCCEEEEEEETTE
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCCH--HHHHHHHhcCCCCeEEEEEEECCe
Confidence 46788999999999999 999999999999999754 778888887654689999998764
No 170
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.69 E-value=8.2e-08 Score=65.61 Aligned_cols=59 Identities=19% Similarity=0.371 Sum_probs=51.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++| |++||.|++|||+++.+ ..++..+++. . ..+.|+|.|...
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~-~~v~l~v~R~g~ 92 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-Q-SQLAVQIRRGRE 92 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH-C-SSEEEEEEETTE
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC-C-CeEEEEEEECCE
Confidence 5789999999999999999 99999999999999975 5778888887 3 589999998664
No 171
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.65 E-value=1e-07 Score=63.75 Aligned_cols=57 Identities=19% Similarity=0.187 Sum_probs=48.9
Q ss_pred EEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCC-CeEEEEEEcCCC
Q psy3208 9 VIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPR-GIVKIGVAKPLP 68 (144)
Q Consensus 9 ~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~-~~V~L~V~r~~~ 68 (144)
+|..|.++++|+++| |+.||+|++|||+.+.++ .++...|..... ..+.|+|.|...
T Consensus 5 ~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 5 VVGEIAANSIAAEAQ-IAPGTELKAVDGIETPDW--DAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp BEEEECTTSHHHHTT-CCTTCEEEEETTEECSSH--HHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred EEEeeCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHHhcCCCcEEEEEEECCC
Confidence 688999999999999 999999999999999755 778887776543 589999999764
No 172
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.64 E-value=1.1e-07 Score=67.39 Aligned_cols=60 Identities=17% Similarity=0.169 Sum_probs=51.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+ +| |+.||.|++|||+++.++ .+...++... ....+.|+|.|...
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~ 116 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIASS--TDLQSALYNHSIGDTIKITYYRNGK 116 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCCH--HHHHHHHHHSSTTCEEEEEEEETTE
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCCH--HHHHHHHHhCCCCCEEEEEEEECCE
Confidence 4689999999999999 99 999999999999999765 6777778765 34689999998764
No 173
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.63 E-value=8.1e-08 Score=84.75 Aligned_cols=63 Identities=41% Similarity=0.441 Sum_probs=57.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++|+|++||+|++|||+++.++++++++.+|+..+ ..|.|+|.|...
T Consensus 330 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~-~~v~L~v~r~~~ 392 (721)
T 2xkx_A 330 GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG-QTVTIIAQYKPE 392 (721)
T ss_pred CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcC-CeEEEEEEeCch
Confidence 358999999999999999999999999999999999999999999999875 689999987543
No 174
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.61 E-value=2.6e-08 Score=82.22 Aligned_cols=64 Identities=25% Similarity=0.456 Sum_probs=57.0
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCC-CCeEEEEEEcCCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP-RGIVKIGVAKPLPI 69 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~-~~~V~L~V~r~~~~ 69 (144)
.+++|..|.+++||+++|+|+.||+|++|||+++.++++.+++.+++..+ ...+.|+|.|....
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~ 296 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPV 296 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSC
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCcccccccccccc
Confidence 46899999999999999999999999999999999999999999998873 34699999886543
No 175
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.58 E-value=1.2e-07 Score=62.25 Aligned_cols=59 Identities=12% Similarity=0.037 Sum_probs=48.9
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~ 67 (144)
.|+.|..+.++++|+++| |++||.|++|||+++.++ .+...+++.. ....+.|+|.|..
T Consensus 19 ~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp EEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTCH--HHHHHHHHTGGGCSEEEEEEEETT
T ss_pred EEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECC
Confidence 377888888889999999 999999999999999765 6677777754 2358999998865
No 176
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.58 E-value=2.3e-07 Score=63.37 Aligned_cols=59 Identities=17% Similarity=0.248 Sum_probs=50.4
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++| |++||+|++|||+++.++ .++...++. ...+.|+|.|...
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~--g~~v~l~v~R~g~ 92 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVDS--SELQEAVLT--ESPLLLEVRRGND 92 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHHH--CSSEEEEEEETTE
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHhC--CCeEEEEEEECCE
Confidence 5689999999999999999 999999999999999754 677777754 2578999988764
No 177
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.56 E-value=4.7e-08 Score=74.99 Aligned_cols=60 Identities=22% Similarity=0.258 Sum_probs=53.7
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeE-EEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIV-KIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V-~L~V~r~~ 67 (144)
.|++|..|.++++|+++| |+.||+|++|||+.+.++++.+++.+|+..+ ..| .|+|.|..
T Consensus 33 ~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g-~~v~~l~V~R~g 93 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG-DETKLLVVDRET 93 (216)
T ss_dssp CSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHC-SEEEEEECCHHH
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcC-CeEEEEEEEECC
Confidence 489999999999999999 9999999999999999889999999998873 677 88887643
No 178
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.49 E-value=5.1e-07 Score=74.14 Aligned_cols=63 Identities=24% Similarity=0.361 Sum_probs=56.3
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..+++|..|.+++||+++| |++||+|++|||+++.+++..++..+|+......|.|+|.|...
T Consensus 98 ~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp SSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred CCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 4689999999999999999 99999999999999999988889999987655689999988654
No 179
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.47 E-value=5.2e-07 Score=61.13 Aligned_cols=58 Identities=12% Similarity=0.048 Sum_probs=47.0
Q ss_pred cEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHc-CCCCeEEEEEEcCC
Q psy3208 7 VIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKG-APRGIVKIGVAKPL 67 (144)
Q Consensus 7 gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~-~~~~~V~L~V~r~~ 67 (144)
|+.|....++++|+++| |++||.|++|||+++.++ .++..++.. .....+.|+|.|..
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTST--THHHHHHHHHTTCSEEEEEEEETT
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCeEEEEEEECC
Confidence 66788888888889999 999999999999999877 445566664 23368999998865
No 180
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.46 E-value=2.3e-07 Score=70.14 Aligned_cols=58 Identities=16% Similarity=0.214 Sum_probs=50.0
Q ss_pred CcEEEEEEcCCChhhhcCCcCC-CCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIP-GDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~-GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
.|++|..|.+++||+++| |++ ||.|++||+. +.++ +++.++++..+...+.|+|.|..
T Consensus 112 ~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~~--~~l~~~l~~~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 112 NVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNES--EDLFSLIETHEAKPLKLYVYNTD 170 (209)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCSS--SCHHHHHHHTTTSCEEEEEEETT
T ss_pred cceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCCH--HHHHHHHHhCCCCeEEEEEEECC
Confidence 589999999999999999 999 9999999997 7554 66778888875578999998865
No 181
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.45 E-value=3.2e-07 Score=73.36 Aligned_cols=62 Identities=18% Similarity=0.237 Sum_probs=53.5
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHc-CCCCeEEEEEEcCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKG-APRGIVKIGVAKPLPI 69 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~-~~~~~V~L~V~r~~~~ 69 (144)
..|++|..|.+++||+++| |++||+|++|||+++.++ .++..+|+. .+...+.|+|.|....
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 305 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISA--LETMDQVAEIRPGSVIPVVVMRDDKQ 305 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCCH--HHHHHHHHTSCTTCEEEEEEESSSCE
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4689999999999999999 999999999999999764 778888886 3446899999997653
No 182
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.41 E-value=7e-07 Score=67.48 Aligned_cols=62 Identities=18% Similarity=0.111 Sum_probs=51.1
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCC-CEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPG-DRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~G-D~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++| |+.| |+|++|||+.+.++.... ..+++......+.|+|.|...
T Consensus 15 ~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~-~~~~~~~~g~~v~l~v~R~~~ 77 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTL-KDLLKANVEKPVKMLIYSSKT 77 (209)
T ss_dssp SEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHH-HHHHHHTTTSCEEEEEEETTT
T ss_pred CCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHH-HHHHhcCCCCEEEEEEEecCC
Confidence 5689999999999999999 9999 999999999998876432 255555555689999988643
No 183
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.38 E-value=1e-06 Score=71.57 Aligned_cols=62 Identities=19% Similarity=0.302 Sum_probs=53.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPLPI 69 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~~~ 69 (144)
..|++|..|.+++||+++| |++||.|++|||+.+.+ ..+...+|+.. +...+.|+|.|....
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 324 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRIATTEPGTKVKLGLLRNGKP 324 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSC--HHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4689999999999999999 99999999999999975 47788888764 446899999997753
No 184
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.37 E-value=7.3e-07 Score=74.42 Aligned_cols=60 Identities=22% Similarity=0.335 Sum_probs=53.6
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPI 69 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~ 69 (144)
.|++|..|.++++|+++| |++||+|++|||+++.+ ++++.++++..+ +.+.|+|.|....
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~--~~~~~~~l~~~~-~~v~l~v~R~g~~ 422 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNS--IAEMRKVLAAKP-AIIALQIVRGNES 422 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhCC-CeEEEEEEECCEE
Confidence 589999999999999999 99999999999999975 488999999865 5899999997653
No 185
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.31 E-value=2.4e-06 Score=59.96 Aligned_cols=59 Identities=27% Similarity=0.276 Sum_probs=49.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHc-CCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKG-APRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~-~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.++++|+++ |+.||+|++|||+.+.++ .++..+++. .....+.|+| |...
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~~--~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSNL--TTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSSH--HHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 468999999999999988 999999999999999755 677778874 3346899999 8664
No 186
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.29 E-value=1.3e-06 Score=69.78 Aligned_cols=61 Identities=23% Similarity=0.279 Sum_probs=52.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEc-CCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAK-PLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r-~~~ 68 (144)
..|++|..|.+++||+++| |+.||+|++|||+++.++ .+...++... ....+.|+|.| ...
T Consensus 241 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~~g~ 303 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVALTFQDPSGG 303 (324)
T ss_dssp SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEECSSCC
T ss_pred CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCCC
Confidence 4689999999999999999 999999999999999765 6777778653 34689999999 654
No 187
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.28 E-value=1.2e-06 Score=70.42 Aligned_cols=59 Identities=20% Similarity=0.392 Sum_probs=51.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
..|++|..|.+++||+++| |+.||.|++|||+.+.++ .+..++++.. ..+.|+|.|...
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~~--~~l~~~l~~~--~~v~l~v~R~g~ 313 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQNA--EDVYEAVRTQ--SQLAVQIRRGRE 313 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHTTC--SSEEEEEEETTE
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCCH--HHHHHHHhCC--CeEEEEEEECCE
Confidence 4689999999999999999 999999999999999754 7788888763 589999999764
No 188
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.27 E-value=1.3e-06 Score=70.81 Aligned_cols=62 Identities=23% Similarity=0.244 Sum_probs=53.5
Q ss_pred CcEEEEEEcCCChhhhcCCcCC-----------CCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCCCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIP-----------GDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPLPIP 70 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~-----------GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~~~~ 70 (144)
.|++|..|.+++||+++| |++ ||+|++|||+++.++ .+...+|... +...|.|+|.|.....
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~ 324 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHKE 324 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSEE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEEE
Confidence 689999999999999999 999 999999999999877 6788888654 3468999999977543
No 189
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.20 E-value=5.2e-06 Score=69.67 Aligned_cols=61 Identities=23% Similarity=0.266 Sum_probs=52.1
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPLPI 69 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~~~ 69 (144)
.|++|..|.+++||+++| |+.||+|++|||+++.++ .++..++... ....+.|+|.|....
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~V~R~g~~ 343 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQA--TQVKTTISLLRVGSTVKIIVERDNKP 343 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 689999999999999999 999999999999999765 6677777753 346899999997643
No 190
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.19 E-value=2.8e-06 Score=71.32 Aligned_cols=59 Identities=10% Similarity=0.134 Sum_probs=52.2
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.|++|..|.++++|+++| |++||+|++||++++.++ +++.++++.. ...+.|+|.|...
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~~--~~~~~~l~~~-~~~v~l~v~R~g~ 444 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISANKKPVTDV--KSLQTIAQEK-KKELLVQVLRGPG 444 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHTTSS-CSCEEEEEEETTE
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHhcC-CCeEEEEEEECCE
Confidence 588999999999999999 999999999999999754 7888999885 4789999988653
No 191
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.16 E-value=6.1e-06 Score=68.81 Aligned_cols=62 Identities=19% Similarity=0.279 Sum_probs=51.9
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPLPI 69 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~~~ 69 (144)
..|++|..|.+++||+++| |+.||+|++|||+.+.++ .++..++... ....+.|+|.|....
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 324 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNGKP 324 (436)
T ss_pred CcceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4689999999999999999 999999999999999766 5566666643 236899999987654
No 192
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.13 E-value=9.9e-06 Score=58.65 Aligned_cols=54 Identities=19% Similarity=0.242 Sum_probs=47.8
Q ss_pred EEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEE
Q psy3208 9 VIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVA 64 (144)
Q Consensus 9 ~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~ 64 (144)
+|..+.++++|+++| |+.||+|++||+.++.++.+..+.-.+++.+ ..+.+.|.
T Consensus 110 ~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g-~~~~l~v~ 163 (166)
T 1w9e_A 110 KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSG-TVVTITIM 163 (166)
T ss_dssp EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSC-SEEEEEEE
T ss_pred EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhCC-CEEEEEEE
Confidence 789999999999999 9999999999999999999998887777765 57777664
No 193
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.12 E-value=3.3e-07 Score=75.57 Aligned_cols=56 Identities=25% Similarity=0.420 Sum_probs=0.0
Q ss_pred EEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEc
Q psy3208 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAK 65 (144)
Q Consensus 8 i~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r 65 (144)
.+|..|.++++|+++| |++||+|++|||+++.+++|++++++|+..+ ..+.|+|..
T Consensus 317 g~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~-~~v~L~V~p 372 (388)
T 3suz_A 317 GIICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSV-GEIHMKTMP 372 (388)
T ss_dssp ----------------------------------------------------------
T ss_pred CEEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEe
Confidence 3788999999999999 9999999999999999999999999999875 678888854
No 194
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.07 E-value=4.8e-07 Score=72.73 Aligned_cols=67 Identities=15% Similarity=0.148 Sum_probs=0.0
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCCCCCCcccc
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLPIPDSSCSQ 76 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~~~~~~~~~ 76 (144)
..|++|..|.+++||+++| |++||+|++|||+++.++ .++..+++. ...+.|+|.|........+++
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~--~~~v~l~v~R~g~~~~~~v~p 319 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVSA--NDVSDVIKR--ESTLNMVVRRGNEDIMITVIP 319 (332)
T ss_dssp ------------------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECCEECCCH--HHHHHHHhC--CCeEEEEEEECCEEEEEEEEE
Confidence 3589999999999999999 999999999999999654 667777775 357999999977655444444
No 195
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.03 E-value=4.1e-06 Score=69.54 Aligned_cols=57 Identities=25% Similarity=0.365 Sum_probs=48.8
Q ss_pred cEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 7 VIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 7 gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.++|..|.+++||+++| |+.||+|++|||+++.++. +..+++. +...|.|+|.|...
T Consensus 91 ~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~-~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 91 NALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQG-STRQLQIGVYKEVV 147 (403)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSC-SCEEEEEEEEEEEC
T ss_pred eEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhC-CCCEEEEEEEeCCc
Confidence 47899999999999999 9999999999999998874 5567776 55689999987543
No 196
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.02 E-value=5.4e-06 Score=71.94 Aligned_cols=60 Identities=13% Similarity=0.199 Sum_probs=49.5
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPLPI 69 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~~~ 69 (144)
.|++|..|.+++||+++| |++||+|++|||..+. . .+...+|+.. +...|.|+|.|....
T Consensus 496 ~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~-~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 556 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQAT-E--QSVKRILERYIPGDTVTIHAFRRDEL 556 (597)
T ss_dssp TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC-T--TTHHHHHTTCCTTCEEEEEEEETTEE
T ss_pred CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECC-H--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 478999999999999999 9999999999999994 2 4456667653 346899999997653
No 197
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.88 E-value=5.6e-06 Score=69.38 Aligned_cols=62 Identities=11% Similarity=0.162 Sum_probs=52.1
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcC-CCCeEEEEEEcCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA-PRGIVKIGVAKPLPI 69 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~-~~~~V~L~V~r~~~~ 69 (144)
..|++|..|.++++|+++| |+.||+|++|||..+.++ .+...++... ....+.|+|.|....
T Consensus 285 ~~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 347 (448)
T 1ky9_A 285 QRGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGKQ 347 (448)
T ss_dssp CCSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSCE
T ss_pred CCceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 3589999999999999999 999999999999999877 5677777653 336899999987643
No 198
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.71 E-value=4.9e-06 Score=69.74 Aligned_cols=59 Identities=17% Similarity=0.342 Sum_probs=0.0
Q ss_pred CcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCCC
Q psy3208 6 TVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPLP 68 (144)
Q Consensus 6 ~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~~ 68 (144)
.|++|..|.++++|+++| |+.||+|++||++++.+ ++++.++|+..+ ..+.|+|.|...
T Consensus 383 ~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~--~~~l~~~l~~~~-~~v~l~v~R~g~ 441 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKN--IAELRKVLDSKP-SVLALNIQRGDS 441 (448)
T ss_dssp ---------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHcCC-CeEEEEEEECCE
Confidence 478999999999999999 99999999999999975 477888888765 488899988664
No 199
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.47 E-value=0.00026 Score=63.59 Aligned_cols=59 Identities=10% Similarity=0.049 Sum_probs=51.3
Q ss_pred CcEEEEEEcCC--------ChhhhcC-CcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEcCC
Q psy3208 6 TVIVIRSLVPG--------GVAQLDA-RLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67 (144)
Q Consensus 6 ~gi~Is~V~~g--------g~A~~~G-rL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r~~ 67 (144)
.+++|..|.++ +||+++| .|+ ||+|++|||+++..+. ++..+|+......|.|+|.|..
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~v~r~~ 815 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARIRLSGKG 815 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEEEEECSS
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEEEEECCC
Confidence 46889999998 9999998 489 9999999999998875 6788888876679999999865
No 200
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.19 E-value=0.00085 Score=57.61 Aligned_cols=59 Identities=8% Similarity=0.153 Sum_probs=51.7
Q ss_pred CCCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCHHHHHHHHHcCCCCeEEEEEEc
Q psy3208 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAK 65 (144)
Q Consensus 4 ~~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~~e~v~ll~~~~~~~V~L~V~r 65 (144)
+..+++|+.|.++++|...+ ++.||.|++||++++.+. .+..++|+.++++.+.|.+..
T Consensus 413 ~~~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s~--~~l~~~l~~~k~~~l~~~~~~ 471 (539)
T 4fln_A 413 GEQIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRNI--HHLAHLIDMCKDKYLVFEFED 471 (539)
T ss_dssp TCCCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCSH--HHHHHHHHTCCSSEEEEEETT
T ss_pred CceEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCCH--HHHHHHHHHcCCCeEEEEECC
Confidence 45689999999999999999 999999999999999776 778999999986677777644
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.97 E-value=0.0011 Score=56.89 Aligned_cols=64 Identities=16% Similarity=0.204 Sum_probs=47.7
Q ss_pred CCcEEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCCCCCH--------HHHHHHHHcC-CCCeEEEEEEcCCCCC
Q psy3208 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASL--------DQAVQALKGA-PRGIVKIGVAKPLPIP 70 (144)
Q Consensus 5 ~~gi~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~~~t~--------~e~v~ll~~~-~~~~V~L~V~r~~~~~ 70 (144)
..|++|..|.+++||++ + |+.||.|++|||+.+..... .....++... +...|.|+|.|.....
T Consensus 276 ~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~ 348 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHK 348 (539)
T ss_dssp SBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred cCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEE
Confidence 46999999999999986 4 99999999999999964321 1123344443 3468999999977543
No 202
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=21.71 E-value=87 Score=27.00 Aligned_cols=28 Identities=18% Similarity=0.285 Sum_probs=20.0
Q ss_pred EEEEEEcCCChhhhcCCcCCCCEEEeeCCEeCC
Q psy3208 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLN 40 (144)
Q Consensus 8 i~Is~V~~gg~A~~~GrL~~GD~Il~VNg~~l~ 40 (144)
++|..+..... + +..||+|++|||+++.
T Consensus 98 i~V~dv~~~~s----~-I~vGdEIlsING~pv~ 125 (583)
T 3dor_A 98 FYFVDIMTFSS----E-IRVGDELLEVDGAPVQ 125 (583)
T ss_dssp EEEEEECSSCC----S-SCTTCEEEEETTEEHH
T ss_pred EEEEecccccc----C-CCCCCEEEEECCccHH
Confidence 56655522221 4 9999999999999884
Done!