RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3208
(144 letters)
>d2csja1 b.36.1.1 (A:8-111) Tight junction protein ZO-2, Tjp2 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 104
Score = 56.4 bits (136), Expect = 5e-12
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 3 PNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIG 62
ET IVI ++PGG A D L DR++ VN T + + AVQ L+ + I I
Sbjct: 36 NGETSIVISDVLPGGPA--DGLLQENDRVVMVNGTPMEDVLHSFAVQQLRKSG-KIAAIV 92
Query: 63 VAKPLPIPDS 72
V +P + +
Sbjct: 93 VKRPRKVQVA 102
>d1ueqa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 123
Score = 55.7 bits (134), Expect = 2e-11
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRG-IVKIG 62
+ + ++S++P G A D ++ GD ++ +NE + + V+ + P G V +
Sbjct: 42 PDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLV 101
Query: 63 VAKPLPIPDSSCSQVSHAGPGLG 85
+ + P+P + +GP G
Sbjct: 102 LCRGYPLPFDPEDPAN-SGPSSG 123
>d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1,
GRIP1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 95
Score = 54.1 bits (130), Expect = 3e-11
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67
I+I SL GG+A+ + GDR+L++N + L L +A+ L+ A V + + K
Sbjct: 30 IIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAG-ETVTLKIKKQT 88
Query: 68 PIPDSS 73
+S
Sbjct: 89 DAQPAS 94
>d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 96
Score = 54.2 bits (130), Expect = 3e-11
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGA---PRGI 58
++ I ++PGG D RL PGD+L+S+N+ + S ++A + A
Sbjct: 30 RNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESP 89
Query: 59 VKIGVAK 65
+I +
Sbjct: 90 WEIAFIR 96
>d1wf8a1 b.36.1.1 (A:8-101) Neurabin-i {Human (Homo sapiens)
[TaxId: 9606]}
Length = 94
Score = 54.1 bits (130), Expect = 3e-11
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGV 63
+ I ++++ GG AQ D R+ D+++ V+ L + + A L+ G V+ +
Sbjct: 31 EKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTK-GNVRFVI 89
Query: 64 AKPLP 68
+ P
Sbjct: 90 GREKP 94
>d2cssa1 b.36.1.1 (A:8-115) Regulating synaptic membrane exocytosis
protein 1, RIMS1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 108
Score = 53.4 bits (128), Expect = 9e-11
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRG-IVKIG 62
I + G +A + L GD +L N L A+ ++ + + V+I
Sbjct: 45 GRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEII 104
Query: 63 VAKP 66
V++P
Sbjct: 105 VSRP 108
>d1x5ra1 b.36.1.1 (A:8-106) Glutamate receptor interacting protein
2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId:
9606]}
Length = 99
Score = 52.6 bits (126), Expect = 1e-10
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGI 58
++ + P A+ L GDR+LS+N + ++++A Q L+ A
Sbjct: 40 PLVCFIEPDSPAERCGLLQVGDRVLSINGIATEDGTMEEANQLLRDAALAH 90
>d1rgra_ b.36.1.1 (A:) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 93
Score = 51.4 bits (123), Expect = 3e-10
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 3 PNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIG 62
++ I I ++PGG A D RL D +L VNE D+ + AV+ALK A IV++
Sbjct: 28 GDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG-SIVRLY 86
Query: 63 VAKPLP 68
V + P
Sbjct: 87 VMRRKP 92
>d1uepa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 51.8 bits (124), Expect = 3e-10
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRG-IVKIGVAKP 66
I+I +++ G A D RL PGD L+ V+ + + + + A R V + V +
Sbjct: 36 ILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRK 95
Query: 67 LPIPDSS 73
+ SS
Sbjct: 96 VLSGPSS 102
>d2fe5a1 b.36.1.1 (A:223-314) Synapse-associated protein 102
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 51.5 bits (123), Expect = 3e-10
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 3 PNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIG 62
P + I I ++ GG AQ D RL GDRLL+VN T+L + ++AV +LK +V +
Sbjct: 28 PGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS-DMVYLK 86
Query: 63 VAKP 66
VAKP
Sbjct: 87 VAKP 90
>d2f0aa1 b.36.1.1 (A:251-342) Segment polarity protein dishevelled
homolog Dvl-2 {African clawed frog (Xenopus laevis)
[TaxId: 8355]}
Length = 92
Score = 51.4 bits (123), Expect = 3e-10
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP--RGIV 59
+ I I S++ GG D R+ PGD LL VN+ + N S D AV+ L+ G +
Sbjct: 25 ERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDIVHKPGPI 84
Query: 60 KIGVAKP 66
+ VAK
Sbjct: 85 VLTVAKL 91
>d2fcfa1 b.36.1.1 (A:1148-1243) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 51.5 bits (123), Expect = 4e-10
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP 55
I I+ ++ A + L PGDR++ V+ DL +AS +QAV+A++ A
Sbjct: 38 IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAG 85
>d1x45a1 b.36.1.1 (A:8-92) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 50.6 bits (121), Expect = 5e-10
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIV 59
++I +++ GG A+ +L GD+++S+N T L L +KG
Sbjct: 28 VIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSR 79
>d1p1da2 b.36.1.1 (A:115-213) Glutamate receptor interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 99
Score = 50.7 bits (121), Expect = 8e-10
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKI 61
+VI + G VA L GD+LL+++ L++ S++ AVQ L+ +VK+
Sbjct: 34 RKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCE-DLVKL 92
Query: 62 GVAK 65
+ K
Sbjct: 93 KIRK 96
>d1x6da1 b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 107
Score = 50.7 bits (121), Expect = 8e-10
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67
I + + P G+A + + G+ +LS+N L + A+ L+ A + V + L
Sbjct: 37 ITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKL 96
Query: 68 P 68
Sbjct: 97 T 97
>d1ujda_ b.36.1.1 (A:) Hypothetical protein KIAA0559 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 50.7 bits (121), Expect = 9e-10
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKI 61
+ E I ++PGG A+ +L+ G ++L N L + + ++ + G +I
Sbjct: 45 HSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQS-GEAEI 103
Query: 62 GVAKPLPIPDSS 73
V L + S
Sbjct: 104 CVRLDLNMSGPS 115
>d2h3la1 b.36.1.1 (A:1310-1412) Erbin {Human (Homo sapiens) [TaxId:
9606]}
Length = 103
Score = 50.2 bits (120), Expect = 1e-09
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 3 PNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIG 62
P++ I + + P G A L PGD+++ N N QAV LK V++
Sbjct: 40 PDDDGIFVTRVQPEGPA--SKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ-NTVELI 96
Query: 63 VAKPLP 68
+ + +
Sbjct: 97 IVREVS 102
>d1rzxa_ b.36.1.1 (A:) GTPase-binding domain of the cell polarity
protein par6 (Par-6B) {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 98
Score = 50.0 bits (119), Expect = 1e-09
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIV 59
+ I I LVPGG+A+ L D ++ VN ++ +LDQ + ++
Sbjct: 36 KQPGIFISRLVPGGLAESTGLLAVNDEVIEVNGIEVAGKTLDQVTDMMVANSSNLI 91
>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 118
Score = 50.4 bits (120), Expect = 1e-09
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRG---IVKIGVA 64
+V+ ++ GG A+ ++ GD ++++N + + +L +A AL+ A + + VA
Sbjct: 45 VVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVA 104
Query: 65 KPLP 68
P
Sbjct: 105 VCPP 108
>d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 94
Score = 49.1 bits (117), Expect = 2e-09
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP 55
N T I I+ +VP A L RL GDR+LS+N D+ N++ + +K A
Sbjct: 31 NTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEAD 84
>d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 90
Score = 49.1 bits (117), Expect = 2e-09
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIV 59
N+ I+I + G A L GD +LSVN DL++A+ D+AVQALK + +V
Sbjct: 28 NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVV 83
>d1wh1a_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 49.6 bits (118), Expect = 3e-09
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKI 61
+ ++ I I + P +A D R+ GDR++ +N ++ N ++AV L +
Sbjct: 44 DEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSEENKNFSL 101
Query: 62 GVAKPLPIPDSSCSQVSHAGPGLG 85
+A+P D +GP G
Sbjct: 102 LIARPELQLDEGWMD-DDSGPSSG 124
>d1ufxa_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 49.2 bits (117), Expect = 3e-09
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP----RG 57
N + + I ++ GG A +L G +L VN L +A + + A R
Sbjct: 28 NTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRD 87
Query: 58 IVKIGVAKPLPIPDS 72
+ V + P S
Sbjct: 88 YIDFLVTEFNSGPSS 102
>d1t2ma1 b.36.1.1 (A:2-93) Afadin {Human (Homo sapiens) [TaxId:
9606]}
Length = 92
Score = 48.7 bits (116), Expect = 4e-09
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKI 61
++ I ++S+V GG A +D RL GD+LLSV+ L S ++A + + +V +
Sbjct: 27 GQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS-SVVTL 85
Query: 62 GVAKP 66
VAK
Sbjct: 86 EVAKQ 90
>d1kwaa_ b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 88
Score = 48.3 bits (115), Expect = 4e-09
Identities = 10/56 (17%), Positives = 23/56 (41%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIV 59
++ ++ GG+ L GD + +N + N +++Q + L+ I
Sbjct: 23 ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSIT 78
>d1i16a_ b.36.1.2 (A:) Interleukin 16 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 49.3 bits (117), Expect = 5e-09
Identities = 13/72 (18%), Positives = 29/72 (40%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGV 63
+ + I + G ++ + PGD +L + T + + +A +K P G V I +
Sbjct: 55 GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVI 114
Query: 64 AKPLPIPDSSCS 75
+ + +
Sbjct: 115 RRKSLQSKETTA 126
>d1va8a1 b.36.1.1 (A:8-107) Maguk p55 subfamily member 5 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 100
Score = 48.4 bits (115), Expect = 5e-09
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVA 64
++I +V GG A+ L GD +L +N ++ +++ L G + +
Sbjct: 43 VIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH-GTLTFVLI 98
>d1g9oa_ b.36.1.1 (A:) Na+/H+ exchanger regulatory factor, NHERF
{Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 47.9 bits (114), Expect = 7e-09
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGV 63
+ IR + PG A+ A L+ GDRL+ VN ++ + Q V ++ A V++ V
Sbjct: 25 GKLGQYIRLVEPGSPAE-KAGLLAGDRLVEVNGENVEKETHQQVVSRIRAAL-NAVRLLV 82
Query: 64 AKP 66
P
Sbjct: 83 VDP 85
>d1qaua_ b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 112
Score = 48.1 bits (114), Expect = 8e-09
Identities = 16/66 (24%), Positives = 33/66 (50%)
Query: 1 MNPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVK 60
++ ++I L+ GG A+ + GD +L+VN+ L + S D A++ L+G
Sbjct: 21 ERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV 80
Query: 61 IGVAKP 66
+ + +
Sbjct: 81 VLILRG 86
>d1wifa_ b.36.1.1 (A:) hypothetical PDZ domain containing protein
Uqcrc2 (4930408O21Rik) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 126
Score = 48.5 bits (115), Expect = 9e-09
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRG-IVKIG 62
N + I L+ G A D L PGD L+SV ++ +L + ++ L+ G +++I
Sbjct: 47 NGPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIK 106
Query: 63 VAKP-LPIPDSS 73
+ L IP
Sbjct: 107 AYRGFLEIPQEW 118
>d1vaea_ b.36.1.1 (A:) Rhophilin-2 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 111
Score = 48.1 bits (114), Expect = 9e-09
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVA 64
T + + L P A A GD ++S+ D ++ + ++ LK V++ V
Sbjct: 35 NTPVQVHFLDPHCSAS-LAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVV 93
Query: 65 KPLPIPDSSCSQVSHAGPGLG 85
L DS+ S + +GP G
Sbjct: 94 SLL---DSTSSMHNKSGPSSG 111
>d2cs5a1 b.36.1.1 (A:8-113) Tyrosine-protein phosphatase
non-receptor type 4, PTPN4 {Human (Homo sapiens) [TaxId:
9606]}
Length = 106
Score = 47.6 bits (113), Expect = 1e-08
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 4 NETVIVIRSLVPGGVAQL-DARLIPGDRLLSVNETDLNNASLDQAVQALKGA---PRGIV 59
+ +++ + PG A L RL GD+++ +N D+ + DQ V +K + G +
Sbjct: 32 QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGEL 91
Query: 60 KIGVAKPLPIPDSS 73
+ V +P + D
Sbjct: 92 MLLV-RPNAVYDVV 104
>d2fnea1 b.36.1.1 (A:1955-2042) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 46.8 bits (111), Expect = 2e-08
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP 55
+ I ++++ G A D RL GD++++VN L + ++AV LK
Sbjct: 28 GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK 79
>d1q3oa_ b.36.1.1 (A:) Shank1, PDZ domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 104
Score = 46.9 bits (111), Expect = 2e-08
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 3 PNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP 55
+ + S+ GGVA A L GD L+ VN ++ Q V ++
Sbjct: 40 AFPALQYLESVDEGGVAW-RAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGG 91
>d1wg6a_ b.36.1.1 (A:) Partitioning-defective 3-like protein, PAR3-L
(RIKEN cDNA 2810455b10) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 127
Score = 47.0 bits (111), Expect = 3e-08
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKI 61
+ I I+S++ GG A D RL D+L++VN L S +A++ L+ + I
Sbjct: 51 TGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNI 110
Query: 62 G 62
Sbjct: 111 R 111
>d1x5qa1 b.36.1.1 (A:8-104) Scribble (KIAA0147) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 46.4 bits (110), Expect = 3e-08
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 3 PNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIG 62
++ I I + G A A + GD+LL VN L A +AV+AL+GA V++
Sbjct: 36 GDDEGIFISRVSEEGPAA-RAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAG-TAVQMR 93
Query: 63 V 63
V
Sbjct: 94 V 94
>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3,
RGS3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 45.6 bits (108), Expect = 3e-08
Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP 55
+ ++++ GG A+ A L D +L +NE + + + ++ P
Sbjct: 20 VRVQAVDSGGPAE-RAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCP 66
>d1uhpa_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 107
Score = 46.1 bits (109), Expect = 4e-08
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 3 PNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIG 62
+ I + +V G A + L DR++ VN DL+ A+ DQAV+A K A + +
Sbjct: 38 SSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAK-EPIVVQ 96
Query: 63 VAKPLPIPDS 72
V + P S
Sbjct: 97 VLRRTSGPSS 106
>d1wfva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 46.1 bits (109), Expect = 5e-08
Identities = 12/70 (17%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGV 63
+ + + L G A + R+ GD+++ +N + + +A++ +K V++ +
Sbjct: 34 YKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGG-RRVRLLL 92
Query: 64 AKPLPIPDSS 73
+ SS
Sbjct: 93 KRGTGSGPSS 102
>d1ozia_ b.36.1.1 (A:) Phosphatase hPTP1e {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 99
Score = 45.7 bits (108), Expect = 6e-08
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKPL 67
I +++++P G A+ D R+ GDR+L+VN L A+ QAV+ L+ +V + + K
Sbjct: 39 IYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG-QVVHLLLEKG- 96
Query: 68 PIP 70
+P
Sbjct: 97 QVP 99
>d1um1a_ b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 45.7 bits (108), Expect = 7e-08
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKI 61
+ + I++L+PG A D RL GDR+L VN + L +AV ++ ++
Sbjct: 32 HLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG-KKMRF 90
Query: 62 GVAKPLPIPDSSCSQVSHAGPGLG 85
VAK D ++ H+GP G
Sbjct: 91 LVAK----SDVETAKKIHSGPSSG 110
>d1uf1a_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 128
Score = 46.2 bits (109), Expect = 7e-08
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGV 63
I I + PG A+ + L GD++L VN N D+AV+ LK + I+ +
Sbjct: 44 YGLGIYITGVDPGSEAE-GSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSRHLILTVKD 102
Query: 64 AKPLPIPDSSCSQVSHAGPGLG 85
LP ++ + G
Sbjct: 103 VGRLPHARTTVDETKWIASSSG 124
>d1uewa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 114
Score = 45.8 bits (108), Expect = 8e-08
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKI 61
+ I ++ G A A+L GDR+L+VN + N V+ +K A V +
Sbjct: 39 STITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKDAG-LSVTL 97
Query: 62 GVAKPLPIPDSS 73
+ + S
Sbjct: 98 RIIPQEELNSPS 109
>d1tp5a1 b.36.1.1 (A:302-403) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 102
Score = 44.9 bits (106), Expect = 1e-07
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIV 59
I I ++ GG A L L GD++LSVN DL NAS +QA ALK A + +
Sbjct: 35 IFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT 86
>d1ujua_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 111
Score = 45.0 bits (106), Expect = 2e-07
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 2 NPNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKI 61
+P + I I + P G A D RL G RLL VN+ L + +AVQ L+ + +
Sbjct: 40 DPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVG-DTLTV 98
Query: 62 GVAKPLPIPDSS 73
V SS
Sbjct: 99 LVCDGFESGPSS 110
>d1whaa_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 44.6 bits (105), Expect = 2e-07
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 3 PNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIG 62
+ I + + GG A L GDR+LS+N D+ A D AV L A + +
Sbjct: 35 AGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAAS-PTIALL 93
Query: 63 VAKPLPIPDSS 73
+ + SS
Sbjct: 94 LEREAGSGPSS 104
>d1ueza_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 44.5 bits (105), Expect = 2e-07
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 3 PNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIG 62
+ I + + PG +A+ L GD++L VN+ L + +AV+ALKG+ + ++ +
Sbjct: 32 EHGVGIYVSLVEPGSLAE-KEGLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVY 90
Query: 63 VAKPLPIPDS 72
A + P S
Sbjct: 91 SAGRISGPSS 100
>d1w9ea1 b.36.1.1 (A:110-194) Syntenin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 85
Score = 43.7 bits (103), Expect = 3e-07
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGV 63
I ++ + A L L GD++L +N + S D+A + LK A + + +
Sbjct: 27 IFVQLVQANSPASL-VGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTI 81
>d1v62a_ b.36.1.1 (A:) Glutamate receptor interacting protein 2,
GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 44.2 bits (104), Expect = 3e-07
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIV-KIG 62
N++VI I + P V L PGD +LS++ T + + SL +A + L + +I
Sbjct: 40 NKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKVRLEIL 99
Query: 63 VAKPLPIPDSSCSQVS 78
P S S
Sbjct: 100 PVPQSQRPLRPSSGPS 115
>d1x5na1 b.36.1.1 (A:8-108) Harmonin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 43.7 bits (103), Expect = 3e-07
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKI 61
+ I I + PG ++ + L GD+++ VN D +N +AV LK + + I
Sbjct: 32 QKPGIFISHVKPGSLSA-EVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSSRSLTISI 88
>d1v5qa_ b.36.1.1 (A:) Glutamate receptor interacting protein {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 122
Score = 43.1 bits (101), Expect = 8e-07
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 3 PNETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIG 62
+ +I + A+ L GDR++++N +++ ++A Q L+ + K+
Sbjct: 42 TLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSIT-SKVT 100
Query: 63 VAKPLPIPDSSCSQVSHAGPGLG 85
+ + +S S +GP G
Sbjct: 101 LEIEFDVAESVIPS-SGSGPSSG 122
>d1y7na1 b.36.1.1 (A:12-90) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 41.7 bits (98), Expect = 1e-06
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 9 VIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP 55
+I SL+ GG+A+ + G R++ +N + ++ V L A
Sbjct: 23 IICSLMRGGIAE-RGGVRVGHRIIEINGQSVVATPHEKIVHILSNAV 68
>d1rgwa_ b.36.1.1 (A:) Zasp (Cypher, Oracle 1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 85
Score = 41.0 bits (96), Expect = 2e-06
Identities = 11/62 (17%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGV 63
+ I + PG A ++L GD +++++ + + + +A +K A + + +
Sbjct: 23 FNMPLTISRITPGSKAA-QSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSAS-YNLSLTL 80
Query: 64 AK 65
K
Sbjct: 81 QK 82
>d1m5za_ b.36.1.1 (A:) Glutamate receptor interacting protein {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 91
Score = 41.1 bits (96), Expect = 2e-06
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP 55
E + ++++ P G L P DRLL VN + V + +
Sbjct: 30 LEKGVYVKNIRPAGPGD-LGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESG 80
>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 41.1 bits (96), Expect = 4e-06
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKI 61
++ I I ++P A A L GD++L+VN+ D + +AV+ LK A +++
Sbjct: 39 SQLGIFISKVIPDSDAH-RAGLQEGDQVLAVNDVDFQDIEHSKAVEILKTAREISMRV 95
>d1ujva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 96
Score = 39.6 bits (92), Expect = 9e-06
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 14 VPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRG 57
Q L GD ++ +N+ ++ N S + V LK P G
Sbjct: 37 KQILDIQGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIG 80
>d1vb7a_ b.36.1.1 (A:) PDZ-LIM protein mystique {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 94
Score = 39.5 bits (92), Expect = 1e-05
Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 5 ETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVA 64
T I++ + G A+ A L PGD ++++N N +A ++ + +++ +
Sbjct: 29 HTPIIVTKVTERGKAE-AADLRPGDIIVAINGQSAENMLHAEAQSKIRQSA-SPLRLQLD 86
Query: 65 KP 66
+
Sbjct: 87 RS 88
>d1uita_ b.36.1.1 (A:) Discs large 5 protein KIAA0583 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 38.8 bits (90), Expect = 3e-05
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAP 55
+ I + + G +A A L GD+LL N +L +A+ QA +
Sbjct: 40 EKGGIYVSKVTVGSIAH-QAGLEYGDQLLEFNGINLRSATEQQARLIIGQQC 90
>d1wf7a_ b.36.1.1 (A:) Enigma homolog ENH {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 103
Score = 36.5 bits (84), Expect = 1e-04
Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGV 63
+ I SL GG A A + GD +LS++ + +A +K G + + +
Sbjct: 27 FNMPLTISSLKDGGKAS-QAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACT-GSLNMTL 84
Query: 64 AKPLPIPDSSCS 75
+ S
Sbjct: 85 QRASAAAKSEPV 96
>d1r6ja_ b.36.1.1 (A:) Syntenin 1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 82
Score = 34.2 bits (78), Expect = 8e-04
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 10 IRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGV 63
I S+V A + L + +N ++ Q L + +V I +
Sbjct: 27 ITSIVKDSSAARNGLL-TEHNICEINGQNVIGLKDSQIADILSTSG-TVVTITI 78
>d1fc6a3 b.36.1.3 (A:157-248) Photosystem II D1 C-terminal
processing protease {Algae (Scenedesmus obliquus)
[TaxId: 3088]}
Length = 92
Score = 34.2 bits (78), Expect = 0.001
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGVAKP 66
+V+ + PGG A+ GD +++V+ T + SL L+G V++ + P
Sbjct: 21 VVVLTPAPGGPAEKA-GARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAP 78
>d1v5la_ b.36.1.1 (A:) Alpha-actinin-2 associated LIM protein
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 103
Score = 33.9 bits (77), Expect = 0.001
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALKGAPRGIVKIGV 63
+VI + PG A A L PGD +L+++ + + A +K A + + +
Sbjct: 27 FNQPLVITRITPGSKAA-AANLCPGDVILAIDGFGTESMTHADAQDRIKAAS-YQLCLKI 84
Query: 64 AKPLPIPDS 72
+ S
Sbjct: 85 DRAETRLWS 93
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 61
Score = 24.7 bits (54), Expect = 1.8
Identities = 11/49 (22%), Positives = 20/49 (40%)
Query: 4 NETVIVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNASLDQAVQALK 52
N+ +I ++ LV G A++ + + + N L Q LK
Sbjct: 5 NDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENMVLK 53
>d2i6va1 b.36.1.5 (A:219-305) General secretion pathway protein C,
EpsC {Vibrio cholerae [TaxId: 666]}
Length = 87
Score = 24.9 bits (54), Expect = 2.3
Identities = 7/55 (12%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 8 IVIRSLVPGGVAQLDARLIPGDRLLSVNETDLNNAS-LDQAVQALKGAPRGIVKI 61
+ + + L GD +++N DL + + ++ Q++ + +
Sbjct: 21 YRVSPGKDPVLFE-SIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTV 74
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.308 0.133 0.377
Gapped
Lambda K H
0.267 0.0574 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 482,873
Number of extensions: 19424
Number of successful extensions: 92
Number of sequences better than 10.0: 1
Number of HSP's gapped: 89
Number of HSP's successfully gapped: 64
Length of query: 144
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 67
Effective length of database: 1,350,386
Effective search space: 90475862
Effective search space used: 90475862
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 49 (23.0 bits)