Query psy3215
Match_columns 186
No_of_seqs 106 out of 916
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 19:16:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3215.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3215hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3edv_A Spectrin beta chain, br 99.9 4.5E-23 1.5E-27 166.0 22.6 162 2-167 84-245 (323)
2 1u4q_A Spectrin alpha chain, b 99.9 5.8E-22 2E-26 159.3 24.5 161 2-166 80-240 (322)
3 3kbt_A Beta-I spectrin, spectr 99.9 3.2E-21 1.1E-25 155.3 24.8 160 2-165 81-241 (326)
4 3lbx_A Spectrin alpha chain, e 99.9 1.1E-21 3.7E-26 143.7 16.8 135 1-139 26-160 (161)
5 1u5p_A Spectrin alpha chain, b 99.9 2.3E-20 8E-25 142.1 19.4 136 2-140 80-215 (216)
6 3f31_A Spectrin alpha chain, b 99.9 9.2E-21 3.1E-25 137.0 16.2 132 2-137 17-148 (149)
7 1s35_A Beta-I spectrin, spectr 99.9 6E-20 2.1E-24 139.6 19.7 136 2-140 78-213 (214)
8 1cun_A Protein (alpha spectrin 99.9 1.9E-19 6.6E-24 136.6 21.4 136 2-140 77-212 (213)
9 3uul_A Utrophin; spectrin repe 99.9 8.9E-20 3.1E-24 126.3 16.8 111 34-144 4-116 (118)
10 3uun_A Dystrophin; triple heli 99.8 1.3E-19 4.6E-24 125.5 16.5 113 34-146 4-118 (119)
11 1quu_A Human skeletal muscle a 99.8 2.4E-19 8.1E-24 139.7 19.8 142 21-166 6-154 (250)
12 3edu_A Beta-I spectrin, spectr 99.8 2E-20 6.8E-25 143.0 12.4 138 2-142 79-216 (218)
13 1hci_A Alpha-actinin 2; triple 99.8 6.2E-19 2.1E-23 148.6 21.6 164 2-166 209-392 (476)
14 1u5p_A Spectrin alpha chain, b 99.8 1.4E-18 4.9E-23 132.2 19.8 130 34-166 5-134 (216)
15 3r6n_A Desmoplakin; spectrin r 99.8 4.8E-18 1.6E-22 142.1 21.9 156 4-166 69-224 (450)
16 1cun_A Protein (alpha spectrin 99.8 5E-18 1.7E-22 128.8 19.8 129 35-166 3-131 (213)
17 1hci_A Alpha-actinin 2; triple 99.8 7.6E-18 2.6E-22 142.0 22.5 158 5-166 97-271 (476)
18 1s35_A Beta-I spectrin, spectr 99.8 4.5E-18 1.5E-22 129.3 18.3 130 35-166 3-132 (214)
19 3edu_A Beta-I spectrin, spectr 99.8 7.6E-18 2.6E-22 128.6 19.3 128 35-165 4-132 (218)
20 1u4q_A Spectrin alpha chain, b 99.8 6.6E-18 2.3E-22 135.5 19.7 136 2-140 186-321 (322)
21 3edv_A Spectrin beta chain, br 99.8 1.9E-17 6.6E-22 133.0 21.0 133 2-137 190-322 (323)
22 3kbt_A Beta-I spectrin, spectr 99.8 2.8E-18 9.7E-23 138.0 13.4 137 2-141 188-324 (326)
23 3fb2_A Spectrin alpha chain, b 99.8 6.4E-17 2.2E-21 123.5 18.8 131 34-167 15-145 (218)
24 3fb2_A Spectrin alpha chain, b 99.8 1.3E-17 4.4E-22 127.4 14.6 129 2-133 90-218 (218)
25 3lbx_B Beta-I spectrin, spectr 99.8 4.8E-17 1.6E-21 121.3 17.0 130 34-166 6-135 (185)
26 1sjj_A Actinin; 3-helix bundle 99.8 9.6E-18 3.3E-22 150.6 15.1 164 2-166 448-631 (863)
27 1sjj_A Actinin; 3-helix bundle 99.7 6.5E-17 2.2E-21 145.2 19.0 159 4-166 335-510 (863)
28 2iak_A Bullous pemphigoid anti 99.7 1.3E-17 4.5E-22 127.9 12.2 131 2-138 94-224 (224)
29 1quu_A Human skeletal muscle a 99.7 1.2E-16 4.2E-21 124.3 16.2 140 2-142 92-244 (250)
30 3pdy_A Plectin; cytoskeleton, 99.7 2.3E-16 8E-21 119.9 17.3 131 2-138 79-209 (210)
31 3pe0_A Plectin; cytoskeleton, 99.7 2.5E-15 8.5E-20 119.0 18.4 132 25-160 2-133 (283)
32 2iak_A Bullous pemphigoid anti 99.7 8.8E-17 3E-21 123.3 8.8 132 27-167 15-146 (224)
33 3pdy_A Plectin; cytoskeleton, 99.7 2.1E-15 7.1E-20 114.7 15.4 121 38-167 11-131 (210)
34 2spc_A Spectrin; cytoskeleton; 99.6 4.5E-15 1.5E-19 101.0 9.4 102 34-137 5-106 (107)
35 3lbx_B Beta-I spectrin, spectr 99.4 6.6E-12 2.2E-16 93.3 14.3 93 2-96 81-173 (185)
36 3r6n_A Desmoplakin; spectrin r 99.4 3E-11 1E-15 101.1 19.6 161 2-164 170-394 (450)
37 1g8x_A Myosin II heavy chain f 99.3 1.1E-12 3.8E-17 119.0 6.4 143 4-149 851-1002(1010)
38 3pe0_A Plectin; cytoskeleton, 99.2 5.4E-11 1.8E-15 94.1 10.2 100 2-103 85-187 (283)
39 2ycu_A Non muscle myosin 2C, a 99.2 1.8E-12 6.2E-17 117.6 -1.6 138 5-144 844-990 (995)
40 2odv_A Plectin 1, HD1; plakin 99.1 2.2E-09 7.6E-14 82.5 11.8 125 5-134 94-225 (235)
41 2odv_A Plectin 1, HD1; plakin 98.6 6.4E-06 2.2E-10 63.2 17.7 128 33-165 12-152 (235)
42 1wlx_A Alpha-actinin 4; three- 98.6 3.9E-06 1.3E-10 58.1 14.6 111 27-140 7-125 (129)
43 3lbx_A Spectrin alpha chain, e 98.6 1.2E-07 4.1E-12 68.7 6.6 70 91-166 12-81 (161)
44 3f31_A Spectrin alpha chain, b 98.5 2.6E-07 8.9E-12 66.0 6.1 59 107-166 13-71 (149)
45 1g8x_A Myosin II heavy chain f 98.3 4.8E-05 1.6E-09 69.4 17.5 144 21-166 756-911 (1010)
46 2ycu_A Non muscle myosin 2C, a 96.2 0.00046 1.6E-08 63.0 -1.8 130 36-166 762-903 (995)
47 3uun_A Dystrophin; triple heli 93.0 0.07 2.4E-06 35.4 3.0 27 142-168 3-29 (119)
48 3uul_A Utrophin; spectrin repe 91.8 0.1 3.6E-06 34.5 2.7 26 143-168 4-29 (118)
49 1c1g_A Tropomyosin; contractIl 83.0 12 0.0004 27.5 25.1 53 2-54 4-56 (284)
50 2spc_A Spectrin; cytoskeleton; 82.0 1.5 5.2E-05 28.3 3.7 25 142-166 4-28 (107)
51 2ke4_A CDC42-interacting prote 79.8 9.9 0.00034 24.6 9.3 60 68-127 17-76 (98)
52 3ghg_A Fibrinogen alpha chain; 74.2 39 0.0013 28.5 12.0 38 66-103 124-161 (562)
53 2lw1_A ABC transporter ATP-bin 73.9 14 0.00047 23.2 9.8 59 37-95 27-85 (89)
54 3na7_A HP0958; flagellar bioge 73.5 27 0.00092 26.3 20.5 56 3-58 31-86 (256)
55 3fx7_A Putative uncharacterize 73.2 15 0.00053 23.4 9.9 31 135-165 53-83 (94)
56 3vkg_A Dynein heavy chain, cyt 71.6 1E+02 0.0035 32.2 20.8 41 17-57 1912-1952(3245)
57 1urq_A M-tomosyn isoform; tran 65.9 18 0.00061 21.3 7.9 47 108-154 6-52 (63)
58 3tul_A Cell invasion protein S 65.5 17 0.00058 25.2 5.6 33 71-103 67-99 (158)
59 1c1g_A Tropomyosin; contractIl 62.1 42 0.0014 24.3 24.7 55 2-56 11-65 (284)
60 3vjf_A WA20; protein design, d 56.2 32 0.0011 21.0 10.2 60 109-168 10-79 (102)
61 1wlx_A Alpha-actinin 4; three- 53.8 32 0.0011 23.3 5.4 32 132-166 6-37 (129)
62 1s94_A S-syntaxin; three helix 51.1 61 0.0021 22.8 11.1 70 68-139 38-107 (180)
63 2avr_X Adhesion A; antiparalle 49.6 55 0.0019 21.8 15.3 94 2-95 7-104 (119)
64 3fx7_A Putative uncharacterize 49.2 49 0.0017 21.1 7.4 53 2-55 25-82 (94)
65 2ieq_A S glycoprotein, spike g 45.4 61 0.0021 21.1 6.3 85 78-163 13-105 (109)
66 2yy0_A C-MYC-binding protein; 44.1 42 0.0014 18.9 4.3 32 106-137 19-50 (53)
67 3tul_A Cell invasion protein S 44.0 78 0.0027 21.9 11.8 51 38-91 75-125 (158)
68 1ez3_A Syntaxin-1A; three heli 41.6 71 0.0024 20.8 13.0 70 68-139 7-76 (127)
69 1vcs_A Vesicle transport throu 41.0 69 0.0024 20.5 9.5 54 34-92 40-93 (102)
70 1oeg_A Apolipoprotein E; siali 40.9 15 0.00053 17.5 1.5 16 7-22 4-19 (26)
71 1wlq_A Geminin; coiled-coil; 2 40.3 65 0.0022 20.0 5.1 27 19-45 25-51 (83)
72 2dfs_A Myosin-5A; myosin-V, in 38.4 2.4E+02 0.0083 26.1 15.2 151 14-178 917-1067(1080)
73 2zxx_A Geminin; coiled-coil, c 37.8 70 0.0024 19.6 5.4 33 19-51 21-53 (79)
74 3ghg_A Fibrinogen alpha chain; 37.2 1.9E+02 0.0065 24.5 13.1 17 68-84 69-85 (562)
75 1ic2_A Tropomyosin alpha chain 37.0 70 0.0024 19.4 10.1 52 112-163 5-56 (81)
76 4dex_B Voltage-dependent N-typ 36.5 90 0.0031 20.5 5.5 37 128-166 10-46 (113)
77 1deq_A Fibrinogen (alpha chain 35.3 1.8E+02 0.006 23.5 11.6 28 68-95 129-156 (390)
78 3htk_A Structural maintenance 35.1 62 0.0021 18.2 8.5 54 113-166 5-58 (60)
79 2ca5_A MXIH; transport protein 35.0 82 0.0028 19.6 5.9 65 35-102 17-81 (85)
80 3tnu_B Keratin, type II cytosk 33.9 1E+02 0.0035 20.4 10.2 31 110-140 61-91 (129)
81 3na7_A HP0958; flagellar bioge 33.1 1.5E+02 0.0052 22.1 20.2 20 75-94 92-111 (256)
82 1pzq_A Erythronolide synthase; 32.1 66 0.0023 17.7 5.1 20 105-124 27-46 (60)
83 1sfc_A VAMP 2, protein (synapt 31.7 99 0.0034 19.5 8.0 35 109-143 33-67 (96)
84 4dey_B Voltage-dependent L-typ 30.8 61 0.0021 21.1 3.6 23 142-164 23-45 (106)
85 2qyw_A Vesicle transport throu 30.2 1.1E+02 0.0037 19.5 10.3 76 7-87 18-99 (102)
86 3mxz_A Tubulin-specific chaper 29.8 1.2E+02 0.0041 20.0 10.5 46 66-120 15-60 (116)
87 3etw_A Adhesin A; antiparallel 29.8 1.2E+02 0.0042 20.1 15.3 93 2-94 7-103 (119)
88 3qne_A Seryl-tRNA synthetase, 29.7 2.5E+02 0.0084 23.5 12.2 62 65-128 32-93 (485)
89 2xhe_B Syntaxin1; exocytosis, 29.4 1.8E+02 0.0062 21.9 8.0 67 71-137 46-112 (279)
90 2pnv_A Small conductance calci 29.3 71 0.0024 17.1 5.0 30 111-140 7-36 (43)
91 1n7s_A Vesicle-associated memb 28.9 86 0.0029 17.9 8.0 38 110-147 8-45 (63)
92 3u1c_A Tropomyosin alpha-1 cha 26.4 1.3E+02 0.0044 19.1 13.8 18 73-90 51-68 (101)
93 1uii_A Geminin; human, DNA rep 25.9 1.2E+02 0.0042 18.7 6.5 27 19-45 33-59 (83)
94 3b5n_A Synaptobrevin homolog 1 25.9 98 0.0033 17.6 8.0 37 110-146 6-42 (61)
95 1ybk_A Tetrabrachion; right ha 24.4 89 0.0031 16.6 4.3 32 110-141 10-42 (52)
96 3swy_A Cyclic nucleotide-gated 24.1 96 0.0033 16.9 6.5 26 111-136 10-35 (46)
97 1lq7_A Alpha3W; three helix bu 23.7 70 0.0024 18.0 2.6 9 63-71 48-56 (67)
98 2iub_A CORA, divalent cation t 23.2 2.7E+02 0.0093 21.8 16.8 100 35-142 191-290 (363)
99 1gl2_A Endobrevin; membrane pr 23.2 1.2E+02 0.004 17.5 8.0 45 108-152 11-55 (65)
100 2p22_C Protein SRN2; endosome, 22.9 2.2E+02 0.0074 20.5 9.0 18 65-82 92-109 (192)
101 3iv1_A Tumor susceptibility ge 22.8 1.4E+02 0.0047 18.3 9.7 64 66-136 6-69 (78)
102 2nps_A VAMP-4, vesicle-associa 22.7 1.3E+02 0.0044 17.9 7.0 44 108-151 10-53 (74)
103 3d5a_X RF1, peptide chain rele 22.7 2.9E+02 0.01 22.0 12.2 18 3-20 2-19 (354)
104 2dnx_A Syntaxin-12; snare, HAB 22.4 1.8E+02 0.006 19.3 11.9 58 78-138 19-76 (130)
105 1m1j_A Fibrinogen alpha subuni 21.6 3.5E+02 0.012 22.4 13.4 38 66-103 125-162 (491)
106 1gmj_A ATPase inhibitor; coile 21.3 1.6E+02 0.0053 18.3 4.9 29 66-94 51-79 (84)
107 2avr_X Adhesion A; antiparalle 20.8 1.9E+02 0.0066 19.2 8.8 52 120-171 44-98 (119)
108 2dq3_A Seryl-tRNA synthetase; 20.6 2.9E+02 0.0099 22.4 6.8 65 65-131 29-93 (425)
109 2dq0_A Seryl-tRNA synthetase; 20.5 3.6E+02 0.012 22.1 11.9 70 65-136 30-99 (455)
No 1
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.92 E-value=4.5e-23 Score=165.99 Aligned_cols=162 Identities=15% Similarity=0.273 Sum_probs=151.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|+.++..|+.+|+.|+..+..|...|+.++. ...|..++.++..||.+++..+. .|+|.|+..++.++++|+.|+.+
T Consensus 84 i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~-~~~f~~~~~e~~~Wl~~k~~~l~--~~~~~d~~~v~~l~~~h~~~~~~ 160 (323)
T 3edv_A 84 IAEWKDGLNEAWADLLELIDTRTQILAASYE-LHKFYHDAKEIFGRIQDKHKKLP--EELGRDQNTVETLQRMHTTFEHD 160 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTCC--CCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcc--cccccChHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999994 46699999999999999998874 57889999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAE 161 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e 161 (186)
|..+++.|..+...|..|...+++..+..|..++..|+.+|..|+..+..|..+|+.+.. +++|..+++++..||.+++
T Consensus 161 l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~-~~~F~~~~~~l~~Wl~~~~ 239 (323)
T 3edv_A 161 IQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGD-KFRFFSMVRDLMLWMEDVI 239 (323)
T ss_dssp THHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998765567899999999999999999999999999999985 7899999999999999999
Q ss_pred hHhhhh
Q psy3215 162 STMECV 167 (186)
Q Consensus 162 ~~L~~~ 167 (186)
..+.+.
T Consensus 240 ~~l~~~ 245 (323)
T 3edv_A 240 RQIEAQ 245 (323)
T ss_dssp HHHHTC
T ss_pred HHHhCC
Confidence 998763
No 2
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.91 E-value=5.8e-22 Score=159.26 Aligned_cols=161 Identities=14% Similarity=0.236 Sum_probs=150.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|..++..|+.+|..|+..+..|+.+|+.++.. ..|..++.++..||.+++..+.+. ++|.|+..++..+++|+.|+.+
T Consensus 80 i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l-~~f~~~~~~~~~Wl~e~e~~~~~~-~~g~dl~~v~~ll~~h~~l~~e 157 (322)
T 1u4q_A 80 VKDKRETINGRFQRIKSMAAARRAKLNESHRL-HQFFRDMDDEESWIKEKKLLVSSE-DYGRDLTGVQNLRKKHKRLEAE 157 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCC-CCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCC-CcCCCHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999985 459999999999999999887764 5789999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAE 161 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e 161 (186)
|..+.+.+..+...|..|+..+++ .+..|+.++..|+.+|..|+..+..|..+|+.++. +++|..+++.+..||.+++
T Consensus 158 l~~~~~~i~~l~~~g~~L~~~~~~-~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~-~~qf~~~~~~~~~Wl~~~e 235 (322)
T 1u4q_A 158 LAAHEPAIQGVLDTGKKLSDDNTI-GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEEEAWINEKM 235 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988754 68899999999999999999999999999999986 7999999999999999999
Q ss_pred hHhhh
Q psy3215 162 STMEC 166 (186)
Q Consensus 162 ~~L~~ 166 (186)
..|.+
T Consensus 236 ~~l~~ 240 (322)
T 1u4q_A 236 TLVAS 240 (322)
T ss_dssp HHHTC
T ss_pred HHhcC
Confidence 88865
No 3
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.90 E-value=3.2e-21 Score=155.26 Aligned_cols=160 Identities=13% Similarity=0.236 Sum_probs=148.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|..++..|+.+|..|+..+..|+.+|++++.. ..|..++.++..||.++|..+.. .++|.|++.++..+++|+.|+.+
T Consensus 81 i~~~l~~l~~~w~~L~~~~~~R~~~Le~~l~l-~~f~~~~~~l~~Wl~~~e~~l~~-~~~g~d~~~v~~l~~~~~~f~~e 158 (326)
T 3kbt_A 81 IIRLQGQVDKHYAGLKDVAEERKRKLENMYHL-FQLKRETDDLEQWISEKELVASS-PEMGQDFDHVTLLRDKFRDFARE 158 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHC-CCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcc-ccCCCCHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999965 56999999999999999998876 45789999999999999999999
Q ss_pred HHh-hHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q psy3215 82 LHQ-FKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEA 160 (186)
Q Consensus 82 i~~-~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~ 160 (186)
|.. +.+.+..++..|..|+..+++ ++..|+.+++.|+.+|..|...+..|...|..+. .+++|+.+++++..||.++
T Consensus 159 l~~~~~~~v~~l~~~~~~L~~~~~~-~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~-~~~~f~~~~~e~~~Wl~ek 236 (326)
T 3kbt_A 159 TGAIGQERVDNVNAFIERLIDAGHS-EAATIAEWKDGLNEMWADLLELIDTRMQLLAASY-DLHRYFYTGAEILGLIDEK 236 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 998 799999999999999998865 6789999999999999999999999999999997 5789999999999999999
Q ss_pred HhHhh
Q psy3215 161 ESTME 165 (186)
Q Consensus 161 e~~L~ 165 (186)
+..|.
T Consensus 237 ~~~L~ 241 (326)
T 3kbt_A 237 HRELP 241 (326)
T ss_dssp HHC--
T ss_pred HhhCc
Confidence 98884
No 4
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.89 E-value=1.1e-21 Score=143.66 Aligned_cols=135 Identities=11% Similarity=0.221 Sum_probs=124.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH
Q psy3215 1 MILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHA 80 (186)
Q Consensus 1 ~i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ 80 (186)
.|+.++..|+.+|+.|+..+..|+.+|++++.. +.|..+++++..||.+.+..+.. +++ +|+..++.++++|+.|+.
T Consensus 26 ~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~~l-q~F~~d~~el~~Wi~ek~~~a~~-~~~-~d~~~v~~ll~kH~afe~ 102 (161)
T 3lbx_A 26 EIQERRQEVLTRYQSFKERVAERGQKLEDSYHL-QVFKRDADDLGKWIMEKVNILTD-KSY-EDPTNIQGKYQKHQSLEA 102 (161)
T ss_dssp TGGGHHHHGGGHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT-TSC-CSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhccC-CCc-CCHHHHHHHHHHHHHHHH
Confidence 388999999999999999999999999999955 56999999999999999986654 334 899999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 81 DLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSA 139 (186)
Q Consensus 81 ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~ 139 (186)
||.++.+.+..+...|..|+..++ ..+..|+.++..|+.+|..|+..+..|..+|.++
T Consensus 103 El~a~~~~~~~l~~~g~~Li~~~~-~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eA 160 (161)
T 3lbx_A 103 EVQTKSRLMSELEKTREERFTMGH-SAHEETKAHIEELRHLWDLLLELTLEKGDQLLRA 160 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTC-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999875 4789999999999999999999999999999886
No 5
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.87 E-value=2.3e-20 Score=142.12 Aligned_cols=136 Identities=13% Similarity=0.205 Sum_probs=124.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|..++..|+.+|..|+..+..|+.+|++++..+ .|..+++++..||.+++..+.+ .++|.|++.++..+++|+.|+.+
T Consensus 80 i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l~-qf~~~~~~~~~Wl~e~e~~~~~-~~~g~dl~~v~~ll~kh~~~~~e 157 (216)
T 1u5p_A 80 VKDKRETINGRFQRIKSMAAARRAKLNESHRLH-QFFRDMDDEESWIKEKKLLVSS-EDYGRDLTGVQNLRKKHKRLEAE 157 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHhcC-cccCCCHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999999865 4999999999999999987654 56889999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAM 140 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~ 140 (186)
|..|.+.+..+...|+.|+..+++ .+..|+.++..|+.+|..|+..+..|..+|+.++
T Consensus 158 l~~~~~~i~~l~~~g~~L~~~~~~-~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al 215 (216)
T 1u5p_A 158 LAAHEPAIQGVLDTGKKLSDDNTI-GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESL 215 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSS-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHhHHHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988754 6789999999999999999999999999998874
No 6
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=99.87 E-value=9.2e-21 Score=137.00 Aligned_cols=132 Identities=12% Similarity=0.206 Sum_probs=122.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|+.++..|..+|..|+..+..|+.+|++++. .+.|..+++++..||.+.+..+.. + .++|+..+...+++|+.|+.|
T Consensus 17 I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~-l~~F~~d~~el~~Wi~ek~~~~~~-~-~~~d~~~v~~~l~kH~afe~E 93 (149)
T 3f31_A 17 IQERRQQVLDRYHRFKELSTLRRQKLEDSYR-FQFFQRDAEELEKWIQEKLQIASD-E-NYKDPTNLQGKLQKHQAFEAE 93 (149)
T ss_dssp HHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTS-C-SSCSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcC-c-ccCCHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999996 577999999999999999987543 3 347999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALN 137 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le 137 (186)
|.++.+.+..+...|..|+..++ ..+..|+.++..|+.+|..|+..+..|..+|.
T Consensus 94 l~a~~~~l~~v~~~g~~Li~~~~-~~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L~ 148 (149)
T 3f31_A 94 VQANSGAIVKLDETGNLMISEGH-FASETIRTRLMELHRQWELLLEKMREKGIKLL 148 (149)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHTC-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999885 47899999999999999999999999999885
No 7
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.86 E-value=6e-20 Score=139.64 Aligned_cols=136 Identities=13% Similarity=0.209 Sum_probs=127.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|+.++..|+.+|+.|...+..|+.+|++++. ++.|..+++++..||...|..|... ++|.+++.++.++++|+.|+.+
T Consensus 78 i~~~l~~L~~~w~~L~~~~~~r~~~L~~~l~-l~~F~~~~~~~~~Wl~~~E~~l~~~-~~g~~~~~v~~llkkh~~f~~~ 155 (214)
T 1s35_A 78 LGQRLEGLDTGWDALGRMWESRSHTLAQCLG-FQEFQKDAKQAEAILSNQEYTLAHL-EPPDSLEAAEAGIRKFEDFLGS 155 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCC-CCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999997 5679999999999999999998765 5788999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAM 140 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~ 140 (186)
|..+...+..+...|..|+..+++ ++..|..++..|+.||..|...+.+|...|+.++
T Consensus 156 l~~~~~~i~~l~~~a~~L~~~~h~-~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l 213 (214)
T 1s35_A 156 MENNRDKVLSPVDSGNKLVAEGNL-YSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999988765 6788999999999999999999999999998764
No 8
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.86 E-value=1.9e-19 Score=136.58 Aligned_cols=136 Identities=17% Similarity=0.314 Sum_probs=127.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|+.++..|+.+|..|+..+..|+.+|+.++.. ..|..+++++..||.+++..+.+. ++|.|++.++..+++|+.|+.+
T Consensus 77 i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~~-~~f~~~~~e~~~Wl~~~e~~l~~~-~~g~~~~~v~~ll~~h~~~~~e 154 (213)
T 1cun_A 77 IQQRLAQFVDHWKELKQLAAARGQRLEESLEY-QQFVANVEEEEAWINEKMTLVASE-DYGDTLAAIQGLLKKHEAFETD 154 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCC-CCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999976 669999999999999999988654 6889999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAM 140 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~ 140 (186)
|..+.+.+..+...|..|+..+++ ++..|+.++..|+.+|..|+..+..|..+|+++.
T Consensus 155 l~~~~~~i~~l~~~~~~L~~~~~~-~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a~ 212 (213)
T 1cun_A 155 FTVHKDRVNDVCANGEDLIKKNNH-HVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999998764 6889999999999999999999999999999874
No 9
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.85 E-value=8.9e-20 Score=126.32 Aligned_cols=111 Identities=17% Similarity=0.286 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccc--CchhHH
Q psy3215 34 SQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQH--DDTTRV 111 (186)
Q Consensus 34 ~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~--~~~~~i 111 (186)
.+.|+..++++..||.++|..|....|+|.|++.++.++++|+.|+.+|.+|++.|..++..|..|+..++. .++..|
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i 83 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEI 83 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHH
Confidence 367999999999999999999999889999999999999999999999999999999999999999987643 246689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 112 KKITEQVNQRYNNLNTSIINRGKALNSAMSSLQ 144 (186)
Q Consensus 112 ~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~ 144 (186)
+.++..|+.||..|+..+.+|..+|+.++..++
T Consensus 84 ~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~~Q 116 (118)
T 3uul_A 84 QEQMTLLNARWEALRVESMERQSRLHDALMELQ 116 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999987654
No 10
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.84 E-value=1.3e-19 Score=125.46 Aligned_cols=113 Identities=24% Similarity=0.363 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhccc--CchhHH
Q psy3215 34 SQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQH--DDTTRV 111 (186)
Q Consensus 34 ~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~--~~~~~i 111 (186)
.+.|+.+++++..||.++|..|....|+|.|++.++.++++|+.|+.+|.+|++.|..++..|..|+..++. +.+..|
T Consensus 4 L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i 83 (119)
T 3uun_A 4 LDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEV 83 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 467999999999999999999998888999999999999999999999999999999999999999876532 346789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 112 KKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNF 146 (186)
Q Consensus 112 ~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f 146 (186)
+.++..|+.||..|+..+.+|..+|+.++..++.|
T Consensus 84 ~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~~Q~~ 118 (119)
T 3uun_A 84 QEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQNQ 118 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999876654
No 11
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.84 E-value=2.4e-19 Score=139.75 Aligned_cols=142 Identities=18% Similarity=0.333 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3215 21 MARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLI 100 (186)
Q Consensus 21 ~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~ 100 (186)
-.|..+|+.+ +..|..++.++..||.+++..+.+.+++|+|++.|+..+++|+.|+.+|.++.+.+..+...|..|+
T Consensus 6 ~~R~~kLe~l---~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~ 82 (250)
T 1quu_A 6 IRRLERLEHL---AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELN 82 (250)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578888888 4679999999999999999999987666899999999999999999999999999999999999999
Q ss_pred hhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHhHHHHHhHhhh
Q psy3215 101 SVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQ-------NFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 101 ~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~-------~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
..+++ ++..|..++..|+.+|..|...+..|..+|++++...+ +|...++++..||.+++..|..
T Consensus 83 ~~~~~-~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~ 154 (250)
T 1quu_A 83 ELDYH-DAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQD 154 (250)
T ss_dssp HTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred hccCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 88754 67899999999999999999999999999999987654 9999999999999999977754
No 12
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.84 E-value=2e-20 Score=143.03 Aligned_cols=138 Identities=18% Similarity=0.282 Sum_probs=106.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|+.++..|+.+|+.|+..+..|+..|+.++. .+.|+.+++++..||.+.+..|. .|+|.|+.+++.++++|+.|+.+
T Consensus 79 i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~-~~~F~~~~~e~~~Wl~ek~~~l~--~~~g~dl~~v~~l~~~h~~~e~d 155 (218)
T 3edu_A 79 IAEWKDGLNEMWADLLELIDTRMQLLAASYD-LHRYFYTGAEILGLIDEKHRELP--EDVGLDASTAESFHRVHTAFERE 155 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCC---------------CCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhCC--CccCCCHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999984 56799999999999999999884 66889999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSS 142 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~ 142 (186)
|..+++.|..|...|..|...++++.+..|..++..|+.+|..|...+..|..+|+.+...
T Consensus 156 L~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~ 216 (218)
T 3edu_A 156 LHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADK 216 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999887544678999999999999999999999999999999754
No 13
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.83 E-value=6.2e-19 Score=148.62 Aligned_cols=164 Identities=11% Similarity=0.277 Sum_probs=148.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQ-------RYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLRE 74 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~-------~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~ 74 (186)
|..++..|+.+|+.|+..+..|+.+|+.++..++ .|..++.++..||.+++..+.... +++|++.++..+++
T Consensus 209 I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~~~~e~l~~~f~~~a~~~~~Wl~~~~~~l~~~~-~~~dl~~v~~ll~~ 287 (476)
T 1hci_A 209 VNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMF-IVHSIEEIQSLITA 287 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-CCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccCCHHHHHHHHHH
Confidence 7789999999999999999999999999998875 799999999999999999998765 68899999999999
Q ss_pred HHHHHHHHHhhHHHHHHH---HHHHHHHHhhccc---CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Q psy3215 75 QKSIHADLHQFKQQIVLF---NQLTQKLISVYQH---DDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSS------ 142 (186)
Q Consensus 75 ~k~l~~ei~~~~~~~~~l---~~~~~~L~~~~~~---~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~------ 142 (186)
|+.|..+|..+.+.+..+ ...|..|+..++. .....|..++..|+.+|..|+..+..|..+|+.++..
T Consensus 288 h~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~i~~~~~~L~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~ 367 (476)
T 1hci_A 288 HEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANER 367 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCSCCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999887777 6778888876643 2456789999999999999999999999999999874
Q ss_pred -HHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 143 -LQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 143 -~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
+++|..+++.+..||.+++..|.+
T Consensus 368 L~~~F~~~a~~~~~Wl~e~e~~l~~ 392 (476)
T 1hci_A 368 LRRQFAAQANAIGPWIQNKMEEIAR 392 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 379999999999999999999875
No 14
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.83 E-value=1.4e-18 Score=132.19 Aligned_cols=130 Identities=20% Similarity=0.373 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHH
Q psy3215 34 SQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKK 113 (186)
Q Consensus 34 ~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~ 113 (186)
++.|...+.++..||.++|..|.+. ++|.|+..++.++++|+.|+.+|..+++.|..+...|..|+..++ .++..|..
T Consensus 5 ~~~F~~~~~~l~~Wl~~~e~~l~~~-~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~-~~~~~i~~ 82 (216)
T 1u5p_A 5 QQNFNTGIKDFDFWLSEVEALLASE-DYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSA-FDTSQVKD 82 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCC-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-SCTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CChHHHHH
Confidence 4679999999999999999999876 588999999999999999999999999999999999999998764 57899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 114 ITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 114 ~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
++..|+.+|..|+..+..|+.+|+.++. +++|..+++++..||.+++..+.+
T Consensus 83 ~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~qf~~~~~~~~~Wl~e~e~~~~~ 134 (216)
T 1u5p_A 83 KRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDEESWIKEKKLLVSS 134 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhHHHHHHHHhcC
Confidence 9999999999999999999999999986 689999999999999999987754
No 15
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.81 E-value=4.8e-18 Score=142.06 Aligned_cols=156 Identities=10% Similarity=0.096 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Q psy3215 4 HKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLH 83 (186)
Q Consensus 4 ~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~ 83 (186)
.++..|..+|..|...+..|+.+|+. . ..|..++++...||.+.+..+.+.+ .|.++..+...+++|+.|+.||.
T Consensus 69 ~~~~~L~~~y~~L~~~a~~Rr~~Le~---L-~qFl~d~~ee~~Wi~EKe~~~~s~d-~gd~l~dv~~l~~khq~l~~EL~ 143 (450)
T 3r6n_A 69 SAIYQLEEEYENLLKASFERMDHLRQ---L-QNIIQATSREIMWINDCEEEELLYD-WSDKNTNIAQKQEAFSIRMSQLE 143 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---H-HHHHHHHHHHHHHHHHHHHHHHSCC-CSTTCCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---H-HHHHHHHHHHHHHHHHHHHHHhccc-cCcChhhHHHHHHHHHHHHHHHH
Confidence 35778999999999999999999983 3 4599999999999999998777653 55555566777899999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhH
Q psy3215 84 QFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAEST 163 (186)
Q Consensus 84 ~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~ 163 (186)
+|++.+..+...|..|+..+++ .+..|+.++..|+.+|..|...+..|..+|+.+. .+++|+.++++...||.+++..
T Consensus 144 ~~e~~i~~v~~~G~~Li~~~Hp-as~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~-~~~QF~~Da~EaesWL~eke~~ 221 (450)
T 3r6n_A 144 VKEKELNKLKQESDQLVLNQHP-ASDKIEAYMDTLQTQWSWILQITKCIDVHLKENA-AYFQFFEEAQSTEAYLKGLQDS 221 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HchHHHHHHHHHHHHHHHcCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998865 6889999999999999999999999999999997 4799999999999999999988
Q ss_pred hhh
Q psy3215 164 MEC 166 (186)
Q Consensus 164 L~~ 166 (186)
|.+
T Consensus 222 l~s 224 (450)
T 3r6n_A 222 IRK 224 (450)
T ss_dssp HHH
T ss_pred hcc
Confidence 865
No 16
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.81 E-value=5e-18 Score=128.77 Aligned_cols=129 Identities=14% Similarity=0.252 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHH
Q psy3215 35 QRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKI 114 (186)
Q Consensus 35 ~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~ 114 (186)
..|..+++++..||.+.+..+.+ .++|.|+..++..+++|+.|+.+|..+.+.+..+...|..|+..++ .++..|..+
T Consensus 3 ~qf~~~~~~~~~Wl~e~e~~l~~-~~~g~dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~-~~~~~i~~~ 80 (213)
T 1cun_A 3 HQFFRDMDDEESWIKEKKLLVSS-EDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNT-IGKEEIQQR 80 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-TTHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHhcC-cccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CcHHHHHHH
Confidence 45999999999999999998876 4688999999999999999999999999999999999999998875 467899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 115 TEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 115 l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
+..|+.+|..|+..+..|..+|+.++. +++|..+++++..||.+++..+.+
T Consensus 81 ~~~l~~~w~~L~~~~~~R~~~Le~~~~-~~~f~~~~~e~~~Wl~~~e~~l~~ 131 (213)
T 1cun_A 81 LAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEEEAWINEKMTLVAS 131 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999985 699999999999999999988765
No 17
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.81 E-value=7.6e-18 Score=141.99 Aligned_cols=158 Identities=16% Similarity=0.337 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHH
Q psy3215 5 KITKLREHWDETNNKV----------MARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLRE 74 (186)
Q Consensus 5 ~l~~l~~~W~~L~~~~----------~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~ 74 (186)
...+++..|+.|.... ..|..+|+.+ +..|..++.++..||.+++..+...+++|.|++.++..+++
T Consensus 97 ~~~~i~~~w~~L~~l~~~r~~~l~~~~~R~~~Le~~---~~~f~~~~~~~~~Wl~e~e~~l~~~~~~g~dl~~v~~ll~k 173 (476)
T 1hci_A 97 MVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHL---AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRK 173 (476)
T ss_dssp CSSSHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHTTHHHHHHCCGGGSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCccCCCHHHHHHHHHH
Confidence 3445666777776554 5666666666 46799999999999999999998765448999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHH
Q psy3215 75 QKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQ-------NFD 147 (186)
Q Consensus 75 ~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~-------~f~ 147 (186)
|+.|+.+|.++.+.+..+...|..|...+++ ++..|..++..|+.+|..|+..+..|..+|+.+...++ +|.
T Consensus 174 h~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~-~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~~~~e~l~~~f~ 252 (476)
T 1hci_A 174 HEAFESDLAAHQDRVEQIAAIAQELNELDYH-DAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFA 252 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCcCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988754 67899999999999999999999999999999987765 899
Q ss_pred HHHHHHHHhHHHHHhHhhh
Q psy3215 148 KSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 148 ~~~~~l~~Wl~e~e~~L~~ 166 (186)
..+..+..||.+++..|..
T Consensus 253 ~~a~~~~~Wl~~~~~~l~~ 271 (476)
T 1hci_A 253 KRAAPFNNWMEGAMEDLQD 271 (476)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999888765
No 18
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.80 E-value=4.5e-18 Score=129.26 Aligned_cols=130 Identities=15% Similarity=0.226 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHH
Q psy3215 35 QRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKI 114 (186)
Q Consensus 35 ~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~ 114 (186)
+.|..++.++..||.+++..+.+.+ +|+|+..++..+++|+.|..+|..+.+.+..+...|..|+...+..++..|+.+
T Consensus 3 q~F~~~~~~l~~Wl~~~~~~l~~~~-~~~dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~ 81 (214)
T 1s35_A 3 QAFLQDLDDFQAWLSITQKAVASED-MPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQR 81 (214)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCC-CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHH
Confidence 4699999999999999999998765 678999999999999999999999999999999999999987644457899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 115 TEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 115 l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
+..|+.+|..|......|..+|+.++. ++.|..+++.+..||.++|..|..
T Consensus 82 l~~L~~~w~~L~~~~~~r~~~L~~~l~-l~~F~~~~~~~~~Wl~~~E~~l~~ 132 (214)
T 1s35_A 82 LEGLDTGWDALGRMWESRSHTLAQCLG-FQEFQKDAKQAEAILSNQEYTLAH 132 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999985 899999999999999999998865
No 19
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.80 E-value=7.6e-18 Score=128.62 Aligned_cols=128 Identities=12% Similarity=0.211 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHhhcccCchhHHHH
Q psy3215 35 QRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQ-FKQQIVLFNQLTQKLISVYQHDDTTRVKK 113 (186)
Q Consensus 35 ~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~-~~~~~~~l~~~~~~L~~~~~~~~~~~i~~ 113 (186)
..|..+++++..||.+.|..+.+. ++|.|++.++..+++|+.|+.++.+ +++.|..++..|..|+..+++ ++..|+.
T Consensus 4 ~~f~~~~~~l~~Wl~~ke~~l~~~-~~g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~-~~~~i~~ 81 (218)
T 3edu_A 4 FQLKRETDDLEQWISEKELVASSP-EMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHS-EAATIAE 81 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCC-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-THHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccc-ccCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCC-CHHHHHH
Confidence 359999999999999999998864 6889999999999999999999998 899999999999999998764 6789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhh
Q psy3215 114 ITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTME 165 (186)
Q Consensus 114 ~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~ 165 (186)
+++.|+.+|..|...+..|...|+.+. .+++|+.+++++..||.+++..|.
T Consensus 82 ~~~~l~~~W~~L~~~~~~R~~~L~~a~-~~~~F~~~~~e~~~Wl~ek~~~l~ 132 (218)
T 3edu_A 82 WKDGLNEMWADLLELIDTRMQLLAASY-DLHRYFYTGAEILGLIDEKHRELP 132 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCC
Confidence 999999999999999999999999997 689999999999999999999884
No 20
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.80 E-value=6.6e-18 Score=135.51 Aligned_cols=136 Identities=17% Similarity=0.321 Sum_probs=126.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|+.++..|+.+|+.|+..+..|+.+|+.++.. ..|..+++++..||.+.+..+.+ .++|.|++.++..+++|+.|+.+
T Consensus 186 i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~~-~qf~~~~~~~~~Wl~~~e~~l~~-~~~g~~~~~~~~ll~~h~~~~~e 263 (322)
T 1u4q_A 186 IQQRLAQFVDHWKELKQLAAARGQRLEESLEY-QQFVANVEEEEAWINEKMTLVAS-EDYGDTLAAIQGLLKKHEAFETD 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTC-CCCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999975 66999999999999999999865 46889999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAM 140 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~ 140 (186)
|..+.+.+..+...|..|+..+++ ++..|..++..|+.||..|+..+..|..+|+++.
T Consensus 264 l~~~~~~v~~l~~~~~~L~~~~~~-~~~~i~~~~~~l~~rw~~l~~~~~~R~~~L~~a~ 321 (322)
T 1u4q_A 264 FTVHKDRVNDVCANGEDLIKKNNH-HVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 321 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999998765 6789999999999999999999999999998764
No 21
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.79 E-value=1.9e-17 Score=133.00 Aligned_cols=133 Identities=12% Similarity=0.202 Sum_probs=124.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|+.++..|+.+|+.|+..+..|+.+|+.++.. ..|..+++++..||.+++..+... ++++|+..++.++.+|+.|..+
T Consensus 190 i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~~-~~F~~~~~~l~~Wl~~~~~~l~~~-~~~~d~~~~e~ll~~h~~l~~e 267 (323)
T 3edv_A 190 IQKRENEVLEAWKSLLDACESRRVRLVDTGDK-FRFFSMVRDLMLWMEDVIRQIEAQ-EKPRDVSSVELLMNNHQGIKAE 267 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC-CCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999964 679999999999999999999864 5778999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALN 137 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le 137 (186)
|..+.+.+..+...|..|+..+.+ .+..|+.++..|+.||..|.....+|...|.
T Consensus 268 i~~~~~~~~~l~~~g~~Ll~~~~~-~~~~i~~~l~~L~~~w~~l~~~w~~R~~~L~ 322 (323)
T 3edv_A 268 IDARNDSFTTCIELGKSLLARKHY-ASEEIKEKLLQLTEKRKEMIDKWEDRWEWLR 322 (323)
T ss_dssp HHHTHHHHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999988753 6789999999999999999999999999885
No 22
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.78 E-value=2.8e-18 Score=137.99 Aligned_cols=137 Identities=18% Similarity=0.278 Sum_probs=95.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|+.++..|+.+|+.|...+..|...|..++.. ..|..+++++..||.+.+..|. .|+|.|+.+++.++++|+.|+.+
T Consensus 188 i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~~-~~f~~~~~e~~~Wl~ek~~~L~--~~~~~d~~~~~~ll~~~~~~e~~ 264 (326)
T 3kbt_A 188 IAEWKDGLNEMWADLLELIDTRMQLLAASYDL-HRYFYTGAEILGLIDEKHRELP--EDVGLDASTAESFHRVHTAFERD 264 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHC-----------------------CHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999854 5699999999999999999884 56788999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMS 141 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~ 141 (186)
|..+++.|..|...|..|...++++.+..|..++..|+.+|..|...+.+|..+|+.+..
T Consensus 265 l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~ 324 (326)
T 3kbt_A 265 VHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTAD 324 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHC---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998765568999999999999999999999999999999864
No 23
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.77 E-value=6.4e-17 Score=123.46 Aligned_cols=131 Identities=15% Similarity=0.283 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHH
Q psy3215 34 SQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKK 113 (186)
Q Consensus 34 ~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~ 113 (186)
.+.|..++.++..||.+++..+... ++|.|++.++.+|.+|+.|+.+|.++.+.+..+...|..|+...++ .+..|+.
T Consensus 15 ~~~F~~~~~~l~~Wl~~~~~~l~~~-e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~-~~~~i~~ 92 (218)
T 3fb2_A 15 LQRFLSDFRDLMSWINGIRGLVSSD-ELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHY-ASPEIKQ 92 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCC-CCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCT-THHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-chHHHHH
Confidence 3569999999999999999999765 5789999999999999999999999999999999999999988754 5789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhhh
Q psy3215 114 ITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMECV 167 (186)
Q Consensus 114 ~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~~ 167 (186)
++..|+.+|..|+.....|..+|+.++. ++.|..++..+..||.+.+..|...
T Consensus 93 ~l~~L~~~w~~L~~~~~~R~~~L~q~l~-l~~F~~d~~~~~~WL~~~e~~L~~~ 145 (218)
T 3fb2_A 93 KLDILDQERADLEKAWVQRRMMLDQCLE-LQLFHRDCEQAENWMAAREAFLNTE 145 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999985 6999999999999999999988764
No 24
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.76 E-value=1.3e-17 Score=127.36 Aligned_cols=129 Identities=16% Similarity=0.309 Sum_probs=100.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|+.++..|+.+|+.|+..+..|+.+|++++.. +.|..+++++..||...|..+... ++|.+++.++..+++|+.|+.+
T Consensus 90 i~~~l~~L~~~w~~L~~~~~~R~~~L~q~l~l-~~F~~d~~~~~~WL~~~e~~L~~~-~~g~s~~~ve~ll~~h~~f~~~ 167 (218)
T 3fb2_A 90 IKQKLDILDQERADLEKAWVQRRMMLDQCLEL-QLFHRDCEQAENWMAAREAFLNTE-DKGDSLDSVEALIKKHEDFDKA 167 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCC--------------------CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999976 679999999999999999988875 5788999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRG 133 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~ 133 (186)
|..+...+..+...|..|+..+++ ++..|..++..|+.||..|...+.+|+
T Consensus 168 l~~~~~~v~~l~~~~~~L~~~~h~-~~~~I~~~~~~l~~rW~~l~~~l~~rr 218 (218)
T 3fb2_A 168 INVQEEKIAALQAFADQLIAAGHY-AKGDISSRRNEVLDRWRRLKAQMIEKR 218 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHhhHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999988754 688999999999999999999988774
No 25
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.76 E-value=4.8e-17 Score=121.32 Aligned_cols=130 Identities=14% Similarity=0.263 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHH
Q psy3215 34 SQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKK 113 (186)
Q Consensus 34 ~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~ 113 (186)
.+.|..++.++..||.+++..+++.+ +|.|+..++..+++|+.+..+|.++++.+..+...|..|+...++ .+..|..
T Consensus 6 l~~F~~~~~dl~~Wl~~~~~~l~~~e-~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~-~~~~i~~ 83 (185)
T 3lbx_B 6 KFRFFSMARDLLSWMESIIRQIETQE-RPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQ-ASEEIRE 83 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC-C--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-THHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCc-CCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCC-cHHHHHH
Confidence 45699999999999999999998765 678999999999999999999999999999999999999988754 5789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 114 ITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 114 ~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
++..|+.+|..|......|..+|+.++. ++.|..++..+..||...+..|.+
T Consensus 84 ~l~~L~~~w~~L~~~w~~r~~~L~~~l~-l~~F~~d~~~~~~Wl~~~e~~L~~ 135 (185)
T 3lbx_B 84 KLQQVMSRRKEMNEKWEARWERLRMLLE-VCQFSRDASVAEAWLIAQEPYLAS 135 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHhHhhhcc
Confidence 9999999999999999999999999984 789999999999999999998865
No 26
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.76 E-value=9.6e-18 Score=150.65 Aligned_cols=164 Identities=11% Similarity=0.219 Sum_probs=146.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQ-------RYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLRE 74 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~-------~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~ 74 (186)
|+.++..|+.+|+.|...+..|+.+|++++..++ .|..+++++..||.+++..+.+.. ++.|++.++.++++
T Consensus 448 I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f~~~a~~~~~Wl~~~e~~l~~~~-~g~dl~~ve~ll~k 526 (863)
T 1sjj_A 448 VNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTF-IVHTIEEIQGLTTA 526 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHCCC-CCSSSGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-hhccHHHHHHHHHH
Confidence 7889999999999999999999999999998875 688999999999999999998764 68999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhhcc------cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------H
Q psy3215 75 QKSIHADLHQFKQQIVLFNQLTQKLISVYQ------HDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAM-------S 141 (186)
Q Consensus 75 ~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~------~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~-------~ 141 (186)
|+.|+.+|.++++.+..+...+..+...+. ..+...+..++..|..||..|+..+..|..+|+.++ .
T Consensus 527 h~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~~~~~~~~ 606 (863)
T 1sjj_A 527 HEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNER 606 (863)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 999999999999999999999998876421 112345566799999999999999999999999988 4
Q ss_pred HHHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 142 SLQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 142 ~~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
.+++|..+++.+..||.+++..|..
T Consensus 607 l~~~F~~~a~~~~~Wi~e~e~~l~~ 631 (863)
T 1sjj_A 607 LRKQFGAQANVIGPWIQTKMEEIGR 631 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999875
No 27
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.75 E-value=6.5e-17 Score=145.24 Aligned_cols=159 Identities=16% Similarity=0.325 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHH
Q psy3215 4 HKITKLREHWDETNNKVM----------ARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLR 73 (186)
Q Consensus 4 ~~l~~l~~~W~~L~~~~~----------~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~ 73 (186)
.++..++.+|+.|..... .|+.+|+.. ...|..++.++..||.+++..+....+...|++.++..++
T Consensus 335 ~~~~~i~~~w~~L~~~~~~r~~~l~~~~~R~~~Le~l---~~~F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~~ll~ 411 (863)
T 1sjj_A 335 KMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHL---AEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLK 411 (863)
T ss_dssp SCGGGHHHHHHHHHHHHTTTHHHHHHHHEEHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHH
Confidence 345778999999998865 456666653 3679999999999999999999986544449999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HH
Q psy3215 74 EQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQ-------NF 146 (186)
Q Consensus 74 ~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~-------~f 146 (186)
+|+.|+.+|..+++.+..+...|+.|....+ .++..|..++..|+.+|..|+..+..|+.+|+.++...+ +|
T Consensus 412 kh~~f~~el~~~~~~v~~l~~~~~~L~~~~~-~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f 490 (863)
T 1sjj_A 412 KHEAFESDLAAHQDRVEQIAAIAQELNELDY-YDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEY 490 (863)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHTCC-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998775 478899999999999999999999999999999997765 89
Q ss_pred HHHHHHHHHhHHHHHhHhhh
Q psy3215 147 DKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 147 ~~~~~~l~~Wl~e~e~~L~~ 166 (186)
...++.+..||.+++..|..
T Consensus 491 ~~~a~~~~~Wl~~~e~~l~~ 510 (863)
T 1sjj_A 491 AKRAAPFNNWMEGAMEDLQD 510 (863)
T ss_dssp HHHTTTTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999998875
No 28
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.75 E-value=1.3e-17 Score=127.94 Aligned_cols=131 Identities=9% Similarity=0.133 Sum_probs=100.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|..++..|+.+|..|+..+..|+.+|+ ....|..+++++..||.+.+..+.+ .++|.++..+...+++|+.|+.+
T Consensus 94 i~~~~~~l~~~~~~L~~~~~~R~~~Le----~l~~F~~~~~~~~~Wi~eke~~~~s-~d~g~~l~~v~~L~~kh~~l~~e 168 (224)
T 2iak_A 94 YTDKLHRLESQYAKLLNTSRNQERHLD----TLHNFVTRATNELIWLNEKEESEVA-YDWSERNSSVARKKSYHAELMRE 168 (224)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCC-C---------------CSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhc-cccCCCchhHHHHHHHHHHHHHH
Confidence 678899999999999999999999999 4456999999999999999998765 45888999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNS 138 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~ 138 (186)
|.+|++.+..+...|..|+..+++ ++..|..++..|+.+|..|...+..|...|++
T Consensus 169 l~~~~~~v~~v~~~g~~L~~~~h~-~~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~~ 224 (224)
T 2iak_A 169 LEQKEESIKAVQEIAEQLLLENHP-ARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred HHHhhHHHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999988764 67889999999999999999999999998863
No 29
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.73 E-value=1.2e-16 Score=124.32 Aligned_cols=140 Identities=13% Similarity=0.304 Sum_probs=121.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQ-------RYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLRE 74 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~-------~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~ 74 (186)
|..++..|+.+|+.|...+..|+.+|++++...+ .|..+++++..||.+++..+.+.. ++.|+++++.++++
T Consensus 92 I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~~~-~~~d~e~v~~ll~~ 170 (250)
T 1quu_A 92 VNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMF-IVHSIEEIQSLITA 170 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCC-CCCSTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc-ccCCHHHHHHHHHH
Confidence 7789999999999999999999999999999875 799999999999999999998764 77899999999999
Q ss_pred HHHHHHHHHhhH---HHHHHHHHHHHHHHhhcccC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 75 QKSIHADLHQFK---QQIVLFNQLTQKLISVYQHD---DTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSS 142 (186)
Q Consensus 75 ~k~l~~ei~~~~---~~~~~l~~~~~~L~~~~~~~---~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~ 142 (186)
|+.|..++..+. ..+..+...+..|+...+.. +.+.|..++..|+.+|..|+..+..|...|+.++..
T Consensus 171 h~~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~ 244 (250)
T 1quu_A 171 HEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELAR 244 (250)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999997766666 55555566677777766432 456788999999999999999999999999999764
No 30
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.73 E-value=2.3e-16 Score=119.90 Aligned_cols=131 Identities=11% Similarity=0.119 Sum_probs=118.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|+.++..|..+|..|+..+..|+.+|+ .+ ..|..++.++..||.+.|..+.+. .+|.+...+...+++|+.|+.+
T Consensus 79 i~~rl~~l~~~~~~L~~~a~~R~~~L~-~L---~~f~~~~~~~~~Wl~eke~~~~s~-d~g~~~~~v~~l~~k~~~f~~e 153 (210)
T 3pdy_A 79 YRDCLGRLDLQYAKLLNSSKARLRSLE-SL---HSFVAAATKELMWLNEKEEEEVGF-DWSDRNTNMTAKKESYSALMRE 153 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHS-CCSTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHcc-ccCCCchhHHHHHHHHHHHHHH
Confidence 678999999999999999999999999 22 569999999999999999988875 4667778899999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNS 138 (186)
Q Consensus 82 i~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~ 138 (186)
|..+++.+..++..|..|+..+++ .+..|..+++.|+.+|..|...+..+...|.+
T Consensus 154 l~~~~~~v~~l~~~~~~Ll~~~h~-~~~~I~~~~~~l~~~W~~L~~L~~~~e~hLk~ 209 (210)
T 3pdy_A 154 LELKEKKIKELQNAGDRLLREDHP-ARPTVESFQAALQTQWSWMLQLCCCIEAHLKE 209 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999998865 67899999999999999999999999888754
No 31
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.69 E-value=2.5e-15 Score=119.05 Aligned_cols=132 Identities=10% Similarity=0.090 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcc
Q psy3215 25 TQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQ 104 (186)
Q Consensus 25 ~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~ 104 (186)
.+|.++...++ |..++++.+.||.+.+...... +.+.....+...+++|+.|+.||.+|++.+..+...|+.|+..++
T Consensus 2 ~rL~~l~~L~q-F~~d~~~e~~Wi~Eke~~~~~~-D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~h 79 (283)
T 3pe0_A 2 SHMRSLESLHS-FVAAATKELMWLNEKEEEEVGF-DWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDH 79 (283)
T ss_dssp -----CHHHHH-HHHHHHHHHHHHHHHHHHHHTC-CCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred hhHHHHHHHHH-HHHHHHHHHHHHHHHhHHhhcC-CchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 46677777765 9999999999999999875443 354433358889999999999999999999999999999999886
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q psy3215 105 HDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEA 160 (186)
Q Consensus 105 ~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~ 160 (186)
+ .+..|+.+++.|...|..|...+..|...|+++.. +++|+.+++++..||..+
T Consensus 80 p-~~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~-~~qF~~da~e~e~Wl~~~ 133 (283)
T 3pe0_A 80 P-ARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAA-YFQFFSDVREAEGQLQKL 133 (283)
T ss_dssp T-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred C-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 5 68899999999999999999999999999999975 799999999999998833
No 32
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.68 E-value=8.8e-17 Score=123.34 Aligned_cols=132 Identities=20% Similarity=0.319 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccC
Q psy3215 27 LDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHD 106 (186)
Q Consensus 27 L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~ 106 (186)
|...+.....|+..+.++..||.+++..|.+. ++|.|+++++.++++|+.|+.+|..|.+.|..+...+..+.. .
T Consensus 15 l~~~L~ea~~~~~~~~~l~~Wl~e~e~~l~s~-d~g~Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~~----~ 89 (224)
T 2iak_A 15 LDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRT-EWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTA----P 89 (224)
T ss_dssp SSSCCCHHHHHC-CHHHHHHHHHHHHHHHHTC-CCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCCT----T
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----c
Confidence 33333344556666999999999999999876 478999999999999999999999999999999876655432 2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhhh
Q psy3215 107 DTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMECV 167 (186)
Q Consensus 107 ~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~~ 167 (186)
.+..|..++..|+.+|..|+..+..|+.+|+ .+++|..+++++..||.+++..+.+.
T Consensus 90 ~~~~i~~~~~~l~~~~~~L~~~~~~R~~~Le----~l~~F~~~~~~~~~Wi~eke~~~~s~ 146 (224)
T 2iak_A 90 LKLSYTDKLHRLESQYAKLLNTSRNQERHLD----TLHNFVTRATNELIWLNEKEESEVAY 146 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4678999999999999999999999999999 57889999999999999999987653
No 33
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.67 E-value=2.1e-15 Score=114.66 Aligned_cols=121 Identities=20% Similarity=0.295 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHH
Q psy3215 38 DAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQ 117 (186)
Q Consensus 38 ~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~ 117 (186)
..+++++..||.+++..+.+. ++|.|+.+++.++++|+.|+.+|.++.+.|..+...|..|.+. ....|..++..
T Consensus 11 ~r~~~dl~~Wl~e~~~~l~s~-d~G~Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~~----~~~~i~~rl~~ 85 (210)
T 3pdy_A 11 LRYLQDLLAWVEENQHRVDGA-EWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPA----TRGAYRDCLGR 85 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCHH----HHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhccc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc----chHHHHHHHHH
Confidence 668999999999999998875 5889999999999999999999999999999999999877543 23469999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhhh
Q psy3215 118 VNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMECV 167 (186)
Q Consensus 118 l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~~ 167 (186)
|..+|..|+..+..|+.+|+ .+++|...+.++..||.+++..+.+.
T Consensus 86 l~~~~~~L~~~a~~R~~~L~----~L~~f~~~~~~~~~Wl~eke~~~~s~ 131 (210)
T 3pdy_A 86 LDLQYAKLLNSSKARLRSLE----SLHSFVAAATKELMWLNEKEEEEVGF 131 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999 35899999999999999999998764
No 34
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=99.60 E-value=4.5e-15 Score=101.03 Aligned_cols=102 Identities=16% Similarity=0.292 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHH
Q psy3215 34 SQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKK 113 (186)
Q Consensus 34 ~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~ 113 (186)
++.|..+++++..||...|..+... ++|.|+..++..+++|+.|+.+|.++...+..+...|+.|+..++. ++..|..
T Consensus 5 lq~F~~d~~~~e~Wl~~~e~~l~~~-d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~h~-~~~~I~~ 82 (107)
T 2spc_A 5 LQLYMRDCELAESWMSAREAFLNAD-DDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHY-ASNLVDE 82 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-CHHHHHH
Confidence 4669999999999999999888765 4688999999999999999999999999999999999999988754 6889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 114 ITEQVNQRYNNLNTSIINRGKALN 137 (186)
Q Consensus 114 ~l~~l~~rw~~L~~~~~~r~~~Le 137 (186)
++..|..||..|...+..|+..|+
T Consensus 83 r~~~l~~~w~~L~~~~~~Rr~~L~ 106 (107)
T 2spc_A 83 KRKQVLERWRHLKEGLIEKRSRLG 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999885
No 35
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.42 E-value=6.6e-12 Score=93.34 Aligned_cols=93 Identities=18% Similarity=0.300 Sum_probs=86.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|+.++..|+.+|+.|...+..|+.+|+.++... .|..+++++..||...|..|.+. ++|.+++.++..+++|+.|+.+
T Consensus 81 i~~~l~~L~~~w~~L~~~w~~r~~~L~~~l~l~-~F~~d~~~~~~Wl~~~e~~L~~~-~~g~sl~~ve~LlkkH~~fe~~ 158 (185)
T 3lbx_B 81 IREKLQQVMSRRKEMNEKWEARWERLRMLLEVC-QFSRDASVAEAWLIAQEPYLASG-DFGHTVDSVEKLIKRHEAFEKS 158 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCC-CCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHhHhhhccC-CCCCCHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999764 59999999999999999999764 6889999999999999999999
Q ss_pred HHhhHHHHHHHHHHH
Q psy3215 82 LHQFKQQIVLFNQLT 96 (186)
Q Consensus 82 i~~~~~~~~~l~~~~ 96 (186)
|.++...+..|...+
T Consensus 159 l~~~~e~i~~L~~~t 173 (185)
T 3lbx_B 159 TASWAERFAALEKPT 173 (185)
T ss_dssp HHHTHHHHHHHHSCC
T ss_pred HHHhHHHHHHHhhhH
Confidence 999999999887643
No 36
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.41 E-value=3e-11 Score=101.07 Aligned_cols=161 Identities=13% Similarity=0.153 Sum_probs=140.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--CCCCCCHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRM--NPVGYTADVLEVQLREQKSIH 79 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~--~~~~~d~~~l~~~l~~~k~l~ 79 (186)
|+.+++.|+.+|+.|...+..|+.+|+++....+ |+.+++++..||.+.+..|.+. .+.|.|+.++...|++|..++
T Consensus 170 I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~Q-F~~Da~EaesWL~eke~~l~s~y~~D~g~d~~~~e~LLkkh~~le 248 (450)
T 3r6n_A 170 IEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQ-FFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKER 248 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHhcccccCcCCCCHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999997755 9999999999999999999875 246789999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhhccc------------------------------------------------------
Q psy3215 80 ADLHQFKQQIVLFNQLTQKLISVYQH------------------------------------------------------ 105 (186)
Q Consensus 80 ~ei~~~~~~~~~l~~~~~~L~~~~~~------------------------------------------------------ 105 (186)
.+|..+...|..|...|..|.+..+.
T Consensus 249 ~~l~~~~~~I~~L~~qA~~l~~l~~r~~~~~~~~~~~V~alcdy~~~e~~i~kge~~~L~~ns~~~~W~V~~~~G~~~~v 328 (450)
T 3r6n_A 249 EKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLV 328 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCGGGSTTCCCSSCCEEEESSCEEETTEEECTTCEEEEEECSSSSEEEEECSSSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCCcccCCCceEEEeccccCCeeeEecCCEEEEecCCCCCceEEecCCCCeecc
Confidence 99999999999999999997642100
Q ss_pred --------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHh
Q psy3215 106 --------DDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTM 164 (186)
Q Consensus 106 --------~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L 164 (186)
......-+..+.+..-|++|...-..+...+...+ .++.|..+++.+.+|.-.+-.++
T Consensus 329 Pavcf~ipppd~eai~~a~~l~~~~~~~~~lw~~~~~~~~~~~-~~~~~~~d~~~i~~w~~~~~~~~ 394 (450)
T 3r6n_A 329 PSVGLIIPPPNPLAVDLSCKIEQYYEAILALWNQLYINMKSLV-SWHYCMIDIEKIRAMTIAKLKTM 394 (450)
T ss_dssp EGGGEECCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHTCCHHHHTTS
T ss_pred ceeEEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhHHHHHhc
Confidence 00135567778899999999999999999999997 58999999999999998875555
No 37
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.33 E-value=1.1e-12 Score=118.96 Aligned_cols=143 Identities=10% Similarity=0.168 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Q psy3215 4 HKITKLREHWDETNNKVMARKTQLDSMLS-------DSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQK 76 (186)
Q Consensus 4 ~~l~~l~~~W~~L~~~~~~r~~~L~~~l~-------~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k 76 (186)
..+..|+..|..|.....+|...|...+. ..++|...++.+..||.+++..|.+. ..+.|+.+++..+++|+
T Consensus 851 l~~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s~-d~g~dL~~Vqal~KKhe 929 (1010)
T 1g8x_A 851 LTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSN-ETGDSITAVQAKLKNLE 929 (1010)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSC-CSCCSTTTTGGGTTSHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cccccHHHHHHHHHHHH
Confidence 34678999999999999999999998754 35789999999999999999999875 47789999999999999
Q ss_pred HHHHHHHhhHHHHH-HHHHHHHHHHhhcccCchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 77 SIHADLHQFKQQIV-LFNQLTQKLISVYQHDDTTRVKKITEQVN-QRYNNLNTSIINRGKALNSAMSSLQNFDKS 149 (186)
Q Consensus 77 ~l~~ei~~~~~~~~-~l~~~~~~L~~~~~~~~~~~i~~~l~~l~-~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~ 149 (186)
+|+.+|.+++..+. .|...|+.|.+... .++..|..++..|. .+|+.|.+.+..|+..|++++. .+++.++
T Consensus 930 a~e~dl~a~e~ri~~~l~~~a~eL~~~~y-~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~lq-~~~~~~~ 1002 (1010)
T 1g8x_A 930 AFDGECQSLEGQSNSDLLSILAQLTELNY-NGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELE-RLQKIED 1002 (1010)
T ss_dssp HHTTTTTHHHHTHHHHHHHHHHHHHHTTC-TTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTTS-TTTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 99999999999998 89999999998875 47899999999996 8999999999999999999975 4544443
No 38
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.23 E-value=5.4e-11 Score=94.11 Aligned_cols=100 Identities=14% Similarity=0.162 Sum_probs=89.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhccCCCCCCHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLT---RMENRMQRMNPVGYTADVLEVQLREQKSI 78 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~---~~E~~l~~~~~~~~d~~~l~~~l~~~k~l 78 (186)
|+.+++.|+..|+.|...+..|..+|+++....+ |+.+++++..||. +.+..+.+ .++|.|..+++..|++|+.+
T Consensus 85 I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~q-F~~da~e~e~Wl~~~~e~~~~~~s-~d~g~d~~s~~~LLkkh~~l 162 (283)
T 3pe0_A 85 VESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQ-FFSDVREAEGQLQKLQEALRRKYS-CDRSATVTRLEDLLQDAQDE 162 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-SCCCSHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC-CccCCCHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999998755 9999999999998 44444444 35889999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhc
Q psy3215 79 HADLHQFKQQIVLFNQLTQKLISVY 103 (186)
Q Consensus 79 ~~ei~~~~~~~~~l~~~~~~L~~~~ 103 (186)
+.+|..+...|..|...|..|.+..
T Consensus 163 e~~l~~~~~~i~~L~~~a~~l~~l~ 187 (283)
T 3pe0_A 163 KEQLNEYKGHLSGLAKRAKAVVQLK 187 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999997654
No 39
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.16 E-value=1.8e-12 Score=117.61 Aligned_cols=138 Identities=12% Similarity=0.231 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Q psy3215 5 KITKLREHWDETNNKVMARKTQLDSMLSD-------SQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKS 77 (186)
Q Consensus 5 ~l~~l~~~W~~L~~~~~~r~~~L~~~l~~-------~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~ 77 (186)
.+..|+.+|..|.....+|...|...+.. .++|..+++..+.||.++|..+.+.. .+.|+..++..+++|++
T Consensus 844 ~~~~L~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~eke~~l~s~d-~g~dl~~vqallkKhea 922 (995)
T 2ycu_A 844 TPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNE-TGDSITAVQAKLKNLEA 922 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cccCHHHHHHHHHHHHH
Confidence 46899999999999999999998766532 36799999999999999999998764 57899999999999999
Q ss_pred HHHHHHhhHHHHH-HHHHHHHHHHhhcccCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 78 IHADLHQFKQQIV-LFNQLTQKLISVYQHDDTTRVKKITEQV-NQRYNNLNTSIINRGKALNSAMSSLQ 144 (186)
Q Consensus 78 l~~ei~~~~~~~~-~l~~~~~~L~~~~~~~~~~~i~~~l~~l-~~rw~~L~~~~~~r~~~Le~~~~~~~ 144 (186)
|+.+|.+++..+. .+.+.|+.|...... ++..|..+...| ..+|..|...+.+|+.+|+++....+
T Consensus 923 ~e~dl~a~e~ri~~~l~~~a~~L~~~~y~-~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~~~~q 990 (995)
T 2ycu_A 923 FDGECQSLEGQSNSDLLSILAQLTELNYN-GVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQ 990 (995)
T ss_dssp HHHHHHHTTTCSCSSHHHHHHHHTTTHHH-HHHHHHHHHTHHHHHHHHHHHSSSCCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997 899999999887754 678999999999 69999999999999999999976533
No 40
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=99.05 E-value=2.2e-09 Score=82.46 Aligned_cols=125 Identities=14% Similarity=0.122 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Q psy3215 5 KITKLREHWDETNNKVMARKTQLDSMLS-------DSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKS 77 (186)
Q Consensus 5 ~l~~l~~~W~~L~~~~~~r~~~L~~~l~-------~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~ 77 (186)
.+.+|+..|..|.....+|...|...+. ...+|+..+.....||.+++..|.... .+++ +...+++|..
T Consensus 94 ~~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L~~d~---~~l~-~~~a~k~~e~ 169 (235)
T 2odv_A 94 HPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQSDV---RLLA-AGKVPQRAGE 169 (235)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHTT-TTCCCSCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcc-hhHHHHHHHH
Confidence 3578999999999999999999988854 347899999999999999999994321 1111 3344788999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 78 IHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGK 134 (186)
Q Consensus 78 l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~ 134 (186)
|+.+|.+++..|..+...|..|....++ ++..|..++..|..+|..|...+..|..
T Consensus 170 ie~dL~~~e~~i~~l~~~a~~L~~~~y~-~a~~i~~r~~~l~~~w~~L~~~~~~r~~ 225 (235)
T 2odv_A 170 VERDLDKADSMIRLLFNDVQTLKDGRHP-QGEQMYRRVYRLHKRLVAIRTEYNLRLK 225 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988764 7899999999999999999999988765
No 41
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=98.62 E-value=6.4e-06 Score=63.16 Aligned_cols=128 Identities=13% Similarity=0.116 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh------hcccC
Q psy3215 33 DSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLIS------VYQHD 106 (186)
Q Consensus 33 ~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~------~~~~~ 106 (186)
.|..|...+.+|..|+..+...+.... .|.++..++.++.++..|... ..-|.+..-......+.. .++..
T Consensus 12 ~~~eYe~~as~Ll~WI~~~~~~l~~r~-f~~sl~~vq~~l~~f~~fr~~--ekppk~~EK~~Le~ll~~lqtklr~~~~~ 88 (235)
T 2odv_A 12 RWQEYRELVLLLLQWMRHHTAAFEERR-FPSSFEEIEILWSQFLKFKEM--ELPAKEADKNRSKGIYQSLEGAVQAGQLK 88 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC--CCSSHHHHHHHHHHHHHHHHH--THHHHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 457799999999999999999998876 668899999999999999974 335555555555444433 11100
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhHHHHHhHhh
Q psy3215 107 DTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSS-------LQNFDKSIDNFLAWLSEAESTME 165 (186)
Q Consensus 107 ~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~-------~~~f~~~~~~l~~Wl~e~e~~L~ 165 (186)
.+.. -.+.+|+.+|..|.....+|...|...+.. .+.|+..+.....||.+++..|.
T Consensus 89 ppeg--~~~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L~ 152 (235)
T 2odv_A 89 VPPG--YHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQ 152 (235)
T ss_dssp CCTT--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 125689999999999999988888777543 47899999999999999999994
No 42
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=98.60 E-value=3.9e-06 Score=58.07 Aligned_cols=111 Identities=12% Similarity=0.194 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhc---
Q psy3215 27 LDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVY--- 103 (186)
Q Consensus 27 L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~--- 103 (186)
|+..-...-.|-+....+..||..++..|. .+....+++.|+..+..|..|..++..+...+..+...+..|-...
T Consensus 7 le~id~L~leFAKrAa~fNnW~e~A~EdL~-D~~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~~~~~~~ 85 (129)
T 1wlx_A 7 LEAIDQLHLEYAKRAAPFNNWMESAMEDLQ-DMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESN 85 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhHHHHhc-cchhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333334445699999999999999999998 3223478999999999999999999999999999977777765422
Q ss_pred c-----cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 104 Q-----HDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAM 140 (186)
Q Consensus 104 ~-----~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~ 140 (186)
+ ...-..|. ..+|...|..|...+.+|...|..-.
T Consensus 86 ~~~~~~~npYT~it--~~~l~~~W~~l~~li~~Rd~~Lq~E~ 125 (129)
T 1wlx_A 86 HIKLSGSNPYTTVT--PQIINSKWEKVQQLVPKRDHALLEEQ 125 (129)
T ss_dssp CCCCSSSCSSCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCCCccch--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 10112222 78899999999999999999987643
No 43
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=98.57 E-value=1.2e-07 Score=68.75 Aligned_cols=70 Identities=19% Similarity=0.425 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 91 LFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 91 ~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
.+...|..+.. ++..|..++..|+.||..|+..+..|+.+|+++. .+++|..+++++..||.+++..+..
T Consensus 12 ~~~~~~~k~~e-----~a~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~-~lq~F~~d~~el~~Wi~ek~~~a~~ 81 (161)
T 3lbx_A 12 VVESSGPKVLE-----TAEEIQERRQEVLTRYQSFKERVAERGQKLEDSY-HLQVFKRDADDLGKWIMEKVNILTD 81 (161)
T ss_dssp ----------C-----CSTTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCcchhh-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccC
Confidence 34455555553 4567999999999999999999999999999998 6899999999999999998876643
No 44
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=98.47 E-value=2.6e-07 Score=66.05 Aligned_cols=59 Identities=17% Similarity=0.323 Sum_probs=54.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 107 DTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 107 ~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
.+..|..++..|..||..|+..+..|+.+|++++. +++|..+++++..||.+++..+..
T Consensus 13 ~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~-l~~F~~d~~el~~Wi~ek~~~~~~ 71 (149)
T 3f31_A 13 TAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYR-FQFFQRDAEELEKWIQEKLQIASD 71 (149)
T ss_dssp CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 56789999999999999999999999999999985 899999999999999999887643
No 45
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=98.28 E-value=4.8e-05 Score=69.41 Aligned_cols=144 Identities=13% Similarity=0.245 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHH
Q psy3215 21 MARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQ----FKQQIVLFNQLT 96 (186)
Q Consensus 21 ~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~----~~~~~~~l~~~~ 96 (186)
..|..+|..+....+ |.....++..|+......+.... .+.++..++..++.|+.|..+... ....+..+-...
T Consensus 756 ~~R~~~l~~~~~~iQ-Y~~~a~~L~~WIr~kqa~l~~r~-~~~sl~~IQ~ll~~f~~fk~~~kp~r~~ek~~Le~l~~~i 833 (1010)
T 1g8x_A 756 EAREQRLGSEQTKSD-YLKRANELVQWINDKQASLESRD-FGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSL 833 (1010)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCC-CCSSHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhh-ccccHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHH
Confidence 345566666665544 99999999999999999887664 678899999999999999886432 112222221111
Q ss_pred H-HHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 97 Q-KLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSS-------LQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 97 ~-~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~-------~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
. .+-....+.........+++|+.+|..|.....+|...|...+.. .++|...++.+..||.+++..|++
T Consensus 834 qtklrl~~r~~~~p~~gl~~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s 911 (1010)
T 1g8x_A 834 QTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGS 911 (1010)
T ss_dssp HHHHHTTTCCCCCCCTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSS
T ss_pred HHHHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1 121111111111133346789999999999999999998886543 689999999999999999988865
No 46
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=96.15 E-value=0.00046 Score=63.00 Aligned_cols=130 Identities=11% Similarity=0.259 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHH---hhc-ccCchhH
Q psy3215 36 RYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFK-QQIVLFNQLTQKLI---SVY-QHDDTTR 110 (186)
Q Consensus 36 ~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~-~~~~~l~~~~~~L~---~~~-~~~~~~~ 110 (186)
.|...+.++..|+......+.... .+.++..++..++.|+.++....... .....|......+. ... .+.....
T Consensus 762 eYe~~a~~Ll~WIr~k~a~l~~r~-~~~sl~~IQ~~ir~f~~fr~~ekpp~~~ek~rLeal~~~iqtkLrl~~~~~y~p~ 840 (995)
T 2ycu_A 762 DYLKRANELVQWINDKQASLESRD-FGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAP 840 (995)
T ss_dssp HHHHHHHHHHHHTTTTTCCCSCHH-HHHHHHHHHHHHHHHTTHHHHTHHHHHHHHHHHCSSSCCCCCSSCSSTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Confidence 488888999999977665443332 33456778888888887776543221 11222221111111 000 0001122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 111 VKKITEQVNQRYNNLNTSIINRGKALNSAMSS-------LQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 111 i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~-------~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
..-.+..|+.+|..|.....+|...|...+.. +++|...+.....||.+++..|..
T Consensus 841 ~gl~~~~L~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~eke~~l~s 903 (995)
T 2ycu_A 841 AGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGS 903 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34557899999999999999999988766543 378999999999999999999876
No 47
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=92.98 E-value=0.07 Score=35.37 Aligned_cols=27 Identities=26% Similarity=0.653 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHhHhhhhH
Q psy3215 142 SLQNFDKSIDNFLAWLSEAESTMECVE 168 (186)
Q Consensus 142 ~~~~f~~~~~~l~~Wl~e~e~~L~~~~ 168 (186)
.+++|+.+++++..||.++|..|.+..
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~ 29 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQG 29 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999997743
No 48
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=91.79 E-value=0.1 Score=34.51 Aligned_cols=26 Identities=27% Similarity=0.625 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHhHHHHHhHhhhhH
Q psy3215 143 LQNFDKSIDNFLAWLSEAESTMECVE 168 (186)
Q Consensus 143 ~~~f~~~~~~l~~Wl~e~e~~L~~~~ 168 (186)
++.|+.+++++..||.++|..|....
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~ 29 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQD 29 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999998743
No 49
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=83.03 E-value=12 Score=27.50 Aligned_cols=53 Identities=11% Similarity=0.138 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENR 54 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~ 54 (186)
|++++..++..|+.+...+..-...+...-.....+...+..+..=+...+..
T Consensus 4 ~~~~~~~l~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 56 (284)
T 1c1g_A 4 IKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDE 56 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666666666666666655555555544444444444444444444433
No 50
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=82.00 E-value=1.5 Score=28.30 Aligned_cols=25 Identities=20% Similarity=0.393 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 142 SLQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 142 ~~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
.+++|..+++.+..||.+.+..|+.
T Consensus 4 ~lq~F~~d~~~~e~Wl~~~e~~l~~ 28 (107)
T 2spc_A 4 DLQLYMRDCELAESWMSAREAFLNA 28 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4689999999999999999988865
No 51
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=79.80 E-value=9.9 Score=24.55 Aligned_cols=60 Identities=8% Similarity=0.036 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHH
Q psy3215 68 LEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNT 127 (186)
Q Consensus 68 l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~ 127 (186)
......+...++.+|..-...-+.|..+-.-......-.+...+...+..+...++.|..
T Consensus 17 kkkL~~Ki~el~~ei~ke~~~regl~Km~~vY~~nP~~GD~~s~~~~L~e~~~kid~L~~ 76 (98)
T 2ke4_A 17 RKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQMGDPASLEPQIAETLSNIERLKL 76 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCGGGCCGGGSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 456667777888998888888888888777766655445666777777666555554443
No 52
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=74.19 E-value=39 Score=28.52 Aligned_cols=38 Identities=3% Similarity=-0.041 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhc
Q psy3215 66 DVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVY 103 (186)
Q Consensus 66 ~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~ 103 (186)
..|..++...+.|+.-|......|..|.....-=+..|
T Consensus 124 ekVdnQlsnIrvLQsnLedq~~kIQRLEvDIdiqirsC 161 (562)
T 3ghg_A 124 RKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSC 161 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34666777777777777777777777766555555554
No 53
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=73.93 E-value=14 Score=23.19 Aligned_cols=59 Identities=8% Similarity=0.116 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy3215 37 YDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQL 95 (186)
Q Consensus 37 f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~ 95 (186)
.-..+..+..=+..++..|+....+..|++.+.....++..++.++......-..|...
T Consensus 27 le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erWeeLe~~ 85 (89)
T 2lw1_A 27 LPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERWEYLEAL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44566666666666777776544345677777777777777777777666555555443
No 54
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=73.45 E-value=27 Score=26.35 Aligned_cols=56 Identities=7% Similarity=0.185 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy3215 3 LHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRM 58 (186)
Q Consensus 3 ~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~ 58 (186)
...+..+......+...+......+.+.-.....+..++.++..=+...+..+...
T Consensus 31 p~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~~v 86 (256)
T 3na7_A 31 RKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEI 86 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 34566666777777777777777777777777777777888887777777777643
No 55
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=73.20 E-value=15 Score=23.45 Aligned_cols=31 Identities=29% Similarity=0.584 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhHhh
Q psy3215 135 ALNSAMSSLQNFDKSIDNFLAWLSEAESTME 165 (186)
Q Consensus 135 ~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~ 165 (186)
.+++....++.|...+.+...||.+.-+.+.
T Consensus 53 ~fe~l~s~l~~f~e~a~e~vp~L~~~i~vle 83 (94)
T 3fx7_A 53 VLDNLKSTFNEFDEAAQEQIAWLKERIRVLE 83 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHhHHHHHHHHHhH
Confidence 3445555566777777777888877655544
No 56
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=71.59 E-value=1e+02 Score=32.22 Aligned_cols=41 Identities=10% Similarity=0.174 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy3215 17 NNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQR 57 (186)
Q Consensus 17 ~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~ 57 (186)
...+..+..+|+..+.+...=...+++|..=|...+..|..
T Consensus 1912 ~~el~~~~~rl~~GL~KL~et~~~V~~l~~~L~~~~~~L~~ 1952 (3245)
T 3vkg_A 1912 RDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDV 1952 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666677777776665566666676666666665554
No 57
>1urq_A M-tomosyn isoform; transport protein, tomosyn-snare complex, exocytosis, four helical bundle, coiled coil; 2.0A {Rattus norvegicus} SCOP: h.1.15.1
Probab=65.93 E-value=18 Score=21.27 Aligned_cols=47 Identities=19% Similarity=0.184 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 108 TTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFL 154 (186)
Q Consensus 108 ~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~ 154 (186)
-..++..++++..-...-...+.+|..+|+..-.....+......|.
T Consensus 6 i~~v~~qv~ev~~iM~~ni~kvlERGekL~~L~dkT~~L~~~A~~F~ 52 (63)
T 1urq_A 6 IEGVKGAASGVVGELARARLALDERGQKLSDLEERTAAMMSSADSFS 52 (63)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677777777777777777888888887777666555555555544
No 58
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=65.48 E-value=17 Score=25.20 Aligned_cols=33 Identities=6% Similarity=0.058 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhc
Q psy3215 71 QLREQKSIHADLHQFKQQIVLFNQLTQKLISVY 103 (186)
Q Consensus 71 ~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~ 103 (186)
.+..+....+-+.+.+.++...+..-..|.+..
T Consensus 67 ai~n~~sA~~~~d~lekKl~~aq~kL~~L~P~~ 99 (158)
T 3tul_A 67 SIKKTDTAKSVYDAATKKLTQAQNKLQSLDPAD 99 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTC----
T ss_pred HhcccchHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 333444444444455555555554444444444
No 59
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=62.11 E-value=42 Score=24.32 Aligned_cols=55 Identities=9% Similarity=0.102 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQ 56 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~ 56 (186)
+...+..+...|+.+...+..-...+...-.........+..+..=+......+.
T Consensus 11 l~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (284)
T 1c1g_A 11 LKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALK 65 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777777777766666666655555555555555555555554444
No 60
>3vjf_A WA20; protein design, de novo protein, binary patterned design, FO bundle, rudimentary enzymatic activitie; 2.20A {Synthetic construct}
Probab=56.17 E-value=32 Score=20.98 Aligned_cols=60 Identities=10% Similarity=0.354 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHhHHHHHhHhhhhH
Q psy3215 109 TRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDK----------SIDNFLAWLSEAESTMECVE 168 (186)
Q Consensus 109 ~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~----------~~~~l~~Wl~e~e~~L~~~~ 168 (186)
+.|++-+..++..|..-...+.+--.+.+..+...+.|-+ -+.++..+|..+..-|.+-+
T Consensus 10 ehikellqqlnknwhrhqgnlhdmnqqmeqlfqefqhfmqgnqddgklqnmihemqqfmnqvdnhlqses 79 (102)
T 3vjf_A 10 EHIKELLQQLNKNWHRHQGNLHDMNQQMEQLFQEFQHFMQGNQDDGKLQNMIHEMQQFMNQVDNHLQSES 79 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4577777778888888777777777777766666555533 24566666777666665543
No 61
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=53.80 E-value=32 Score=23.32 Aligned_cols=32 Identities=16% Similarity=0.323 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 132 RGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 132 r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
+..+|+.. +..|-.....|..||+.++..|..
T Consensus 6 ~le~id~L---~leFAKrAa~fNnW~e~A~EdL~D 37 (129)
T 1wlx_A 6 QLEAIDQL---HLEYAKRAAPFNNWMESAMEDLQD 37 (129)
T ss_dssp HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHH---HHHHHHHhHHHHHHHHhHHHHhcc
Confidence 34444444 457999999999999999888854
No 62
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=51.06 E-value=61 Score=22.78 Aligned_cols=70 Identities=10% Similarity=0.167 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 68 LEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSA 139 (186)
Q Consensus 68 l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~ 139 (186)
+..-+.+...+..+|......+..|...-..++... .....++.+++.+...-..+...+..+.+.|+..
T Consensus 38 m~~F~~~v~~I~~~i~~i~~~v~~l~~~~~~~L~~~--~~~~~~k~~le~l~~~i~~~a~~ik~~Lk~l~~~ 107 (180)
T 1s94_A 38 MEEFFEQVEEIRAMIDKISDNVDAVKKKHSDILSAP--QTDDQMKEELEELMTDIKRTANKVRGKLKTIELN 107 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666677777777777777777766655544322 1233566666666666666666666666555543
No 63
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=49.63 E-value=55 Score=21.81 Aligned_cols=94 Identities=15% Similarity=0.167 Sum_probs=67.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHAD 81 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~e 81 (186)
|..++..|...+..|..+=..|-.+..+.......=......+..=+......+....+...--+.-...+++++.+..+
T Consensus 7 V~s~l~~LEaeyq~L~~kE~qrynqeka~AE~A~~~L~~~~~m~~~i~ek~~~i~~~~~~~~yK~eY~~L~KkYk~~~~~ 86 (119)
T 2avr_X 7 LVGELQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDALKK 86 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999988888887766665666666777777777777777766666667777777777766555
Q ss_pred H----HhhHHHHHHHHHH
Q psy3215 82 L----HQFKQQIVLFNQL 95 (186)
Q Consensus 82 i----~~~~~~~~~l~~~ 95 (186)
| ...+..|+-+...
T Consensus 87 Ld~eI~~qe~iI~nFe~I 104 (119)
T 2avr_X 87 LEAEMEQQKAVISDFEKI 104 (119)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 4 4455555554443
No 64
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=49.18 E-value=49 Score=21.09 Aligned_cols=53 Identities=19% Similarity=0.297 Sum_probs=30.8
Q ss_pred hhHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3215 2 ILHKITKLREHWDETNNKV-----MARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRM 55 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~-----~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l 55 (186)
++.....|+.+|++|. .+ ..-...+++.+.....|.+.+.+-..||...-.-+
T Consensus 25 Lq~~~~~L~~~f~~L~-sWqDqkr~kFee~fe~l~s~l~~f~e~a~e~vp~L~~~i~vl 82 (94)
T 3fx7_A 25 LREEVNSLSNHFHNLE-SWRDARRDKFSEVLDNLKSTFNEFDEAAQEQIAWLKERIRVL 82 (94)
T ss_dssp HHHHHHHHHHHHHHCC-SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc-hHhhHHHHHHHHHHHHHHHHHHHHHHhhHHHhHHHHHHHHHh
Confidence 4566677777777774 22 22223344555555667777777777776654443
No 65
>2ieq_A S glycoprotein, spike glycoprotein, peplomer protein, E2; membrane fusion, virus entry, six-HEL bundle, viral protein; 1.75A {Human coronavirus}
Probab=45.41 E-value=61 Score=21.14 Aligned_cols=85 Identities=12% Similarity=0.155 Sum_probs=36.6
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHH
Q psy3215 78 IHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSII--------NRGKALNSAMSSLQNFDKS 149 (186)
Q Consensus 78 l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~--------~r~~~Le~~~~~~~~f~~~ 149 (186)
|.+-|...+.-+..+...-.++.+.... -...|.+-+.+++..|.+....+. .--.+|+..-...+.+...
T Consensus 13 ~n~Ai~~~~~gf~tv~~Al~kiQdVVN~-q~~aLs~ll~QLn~NF~A~s~~lq~~fn~t~lni~~elD~LEa~A~~l~~~ 91 (109)
T 2ieq_A 13 VNDAITQTAEAIHTVTIALNKIQDVVNQ-QGSALNHLTSQLRHNFQSGGRGSGRGGNLTYLNLSSELKQLEAKTASLFQT 91 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCC-----------------CCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccCCCCcchHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444445555555554454444322 445666666777777777777766 2223333333334456666
Q ss_pred HHHHHHhHHHHHhH
Q psy3215 150 IDNFLAWLSEAEST 163 (186)
Q Consensus 150 ~~~l~~Wl~e~e~~ 163 (186)
..+++..++..-.+
T Consensus 92 ~~elq~~idn~n~t 105 (109)
T 2ieq_A 92 TVELQGLIDQINST 105 (109)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhh
Confidence 66666666554433
No 66
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=44.05 E-value=42 Score=18.87 Aligned_cols=32 Identities=6% Similarity=0.113 Sum_probs=26.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 106 DDTTRVKKITEQVNQRYNNLNTSIINRGKALN 137 (186)
Q Consensus 106 ~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le 137 (186)
.+...++...+.+..++..|.....+-+.+|+
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46788999999999999999888888777765
No 67
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=43.97 E-value=78 Score=21.91 Aligned_cols=51 Identities=14% Similarity=0.176 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy3215 38 DAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVL 91 (186)
Q Consensus 38 ~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~ 91 (186)
.+.++++..-++..+.+|....|.+..+..++...+. +..|+.++....+.
T Consensus 75 ~~~~d~lekKl~~aq~kL~~L~P~~P~Yak~~a~~~q---~~~d~~~~~~~~~k 125 (158)
T 3tul_A 75 KSVYDAATKKLTQAQNKLQSLDPADPGYAQAEAAVEQ---AGKEATEAKEALDK 125 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 3445555555555555555554433233333333222 44444444444433
No 68
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=41.63 E-value=71 Score=20.81 Aligned_cols=70 Identities=6% Similarity=0.150 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 68 LEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSA 139 (186)
Q Consensus 68 l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~ 139 (186)
+..-+.+...++.+|......+..|...=..++.... ....++.+++.+...-..+...+..+.+.|+..
T Consensus 7 m~~F~~~v~~I~~~i~~i~~~v~~l~~~~~~~L~~~~--~~~~~~~~l~~l~~~i~~~a~~ik~~Lk~l~~~ 76 (127)
T 1ez3_A 7 MDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPN--PDEKTKEELEELMSDIKKTANKVRSKLKSIEQS 76 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666666666666666666555555443322 223466666665555555555555555555443
No 69
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=40.97 E-value=69 Score=20.47 Aligned_cols=54 Identities=9% Similarity=0.194 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy3215 34 SQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLF 92 (186)
Q Consensus 34 ~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l 92 (186)
...+...+++...-|.+++-.+.+.+| ..-.. ...+.+.+..++...+..+..+
T Consensus 40 i~~ie~~l~EA~ell~qMelE~r~~p~--~~R~~---~~~klr~Yk~dL~~lk~elk~~ 93 (102)
T 1vcs_A 40 VANVEKQLEEARELLEQMDLEVREIPP--QSRGM---YSNRMRSYKQEMGKLETDFKRS 93 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCT--TTHHH---HHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCH--HhHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 345778888999999999988877642 22223 3344555666666666555443
No 70
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=40.94 E-value=15 Score=17.54 Aligned_cols=16 Identities=25% Similarity=0.518 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHH
Q psy3215 7 TKLREHWDETNNKVMA 22 (186)
Q Consensus 7 ~~l~~~W~~L~~~~~~ 22 (186)
.+++.+|..|.+++.+
T Consensus 4 e~mr~Q~~~lveKvq~ 19 (26)
T 1oeg_A 4 EDMQRQWAGLVEKVQA 19 (26)
T ss_dssp HHTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4567788888777654
No 71
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=40.30 E-value=65 Score=19.98 Aligned_cols=27 Identities=15% Similarity=0.267 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 19 KVMARKTQLDSMLSDSQRYDAKRQEVD 45 (186)
Q Consensus 19 ~~~~r~~~L~~~l~~~~~f~~~~~~l~ 45 (186)
.+..|+..|.+++.....++..+....
T Consensus 25 lAE~Rr~AL~eaL~EN~~Lh~~ie~~~ 51 (83)
T 1wlq_A 25 VAEQRRKALYEALKENEKLHKEIEQKD 51 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999998887777666554
No 72
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=38.45 E-value=2.4e+02 Score=26.06 Aligned_cols=151 Identities=5% Similarity=0.058 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q psy3215 14 DETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFN 93 (186)
Q Consensus 14 ~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~ 93 (186)
.++......-..++.+.-.......+...++..-+...+..+. .....++..+.+.+..+.|+......+..+.
T Consensus 917 ~~l~~~~~~LE~kl~eLq~rL~~~e~~n~~L~~~~~~~~~~~~------~e~~~L~~~l~~le~~~~e~~~~~~~v~~L~ 990 (1080)
T 2dfs_A 917 ERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYS------TETEKLRSDVERLRMSEEEAKNATNRVLSLQ 990 (1080)
T ss_dssp ----------------------------------CHHHHHHHH------HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhhhHHHhhh
Q psy3215 94 QLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMECVEVETDR 173 (186)
Q Consensus 94 ~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~~~~~~~~ 173 (186)
+....+-... .........+..+...+...+.+....|+..... +.+.++++..++.+.+............
T Consensus 991 ~e~~~l~~~~-----~~~~ke~~~lee~~~~~~~~L~~kv~~L~~e~~~---L~qq~~~l~~~~~~~~~~~~~~~~~~~~ 1062 (1080)
T 2dfs_A 991 EEIAKLRKEL-----HQTQTEKKTIEEWADKYKHETEQLVSELKEQNTL---LKTEKEELNRRIHDQAKEITETMEKKLV 1062 (1080)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hhhhh
Q psy3215 174 QAEKQ 178 (186)
Q Consensus 174 ~~~~~ 178 (186)
+...+
T Consensus 1063 ~~~~~ 1067 (1080)
T 2dfs_A 1063 EETKQ 1067 (1080)
T ss_dssp HHHHH
T ss_pred HHHHH
No 73
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=37.75 E-value=70 Score=19.64 Aligned_cols=33 Identities=15% Similarity=0.290 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 19 KVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRM 51 (186)
Q Consensus 19 ~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~ 51 (186)
.+..|+..|.+++.....++..+.....=|...
T Consensus 21 lAE~RR~AL~eaL~EN~~Lh~~ie~~~eEi~~L 53 (79)
T 2zxx_A 21 VAEQRRKALYEALKENEKLHKEIEQKDSEIARL 53 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999888888777766555433
No 74
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=37.16 E-value=1.9e+02 Score=24.45 Aligned_cols=17 Identities=29% Similarity=0.282 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy3215 68 LEVQLREQKSIHADLHQ 84 (186)
Q Consensus 68 l~~~l~~~k~l~~ei~~ 84 (186)
|+.++.+++.-..++..
T Consensus 69 LKnqLEdlsKnsKdseq 85 (562)
T 3ghg_A 69 LKNSLFEYQKNNKDSHS 85 (562)
T ss_dssp HHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHhhchhHHH
Confidence 33344443333333333
No 75
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=37.01 E-value=70 Score=19.43 Aligned_cols=52 Identities=12% Similarity=0.054 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhH
Q psy3215 112 KKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAEST 163 (186)
Q Consensus 112 ~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~ 163 (186)
+.++..|..-.+.....+..-...|..+-....++...+..+..=|..++..
T Consensus 5 kkKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~e 56 (81)
T 1ic2_A 5 KKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDE 56 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333333333333333333333333333333333
No 76
>4dex_B Voltage-dependent N-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 2.00A {Rattus norvegicus}
Probab=36.51 E-value=90 Score=20.50 Aligned_cols=37 Identities=24% Similarity=0.486 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 128 SIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 128 ~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
++..|+.-+.- ...+++..++.-+..||..+|...-.
T Consensus 10 rve~R~~F~Kl--R~~qq~e~~l~GYl~WI~kAEev~l~ 46 (113)
T 4dex_B 10 RVENRRAFLKL--RRQQQIERELNGYLEWIFKAEEVMLA 46 (113)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 34444433332 34578999999999999999887655
No 77
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=35.32 E-value=1.8e+02 Score=23.51 Aligned_cols=28 Identities=4% Similarity=0.005 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy3215 68 LEVQLREQKSIHADLHQFKQQIVLFNQL 95 (186)
Q Consensus 68 l~~~l~~~k~l~~ei~~~~~~~~~l~~~ 95 (186)
|..++...+.|+..|......|..|...
T Consensus 129 V~~q~~~ir~Lq~~l~~q~~kiqRLE~~ 156 (390)
T 1deq_A 129 VIEQVQRINLLQKNVRDQLVDMKRLEVD 156 (390)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444333
No 78
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=35.12 E-value=62 Score=18.22 Aligned_cols=54 Identities=6% Similarity=0.088 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhhh
Q psy3215 113 KITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDNFLAWLSEAESTMEC 166 (186)
Q Consensus 113 ~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~e~e~~L~~ 166 (186)
.....+........+........++.+-..+.++.+.+..+..=|......+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~qi~~ 58 (60)
T 3htk_A 5 NTKKTLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQNEY 58 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334445555555555555566666666555555666666666666555544443
No 79
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=35.02 E-value=82 Score=19.59 Aligned_cols=65 Identities=11% Similarity=0.163 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q psy3215 35 QRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISV 102 (186)
Q Consensus 35 ~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~ 102 (186)
..|...+.++..=+..+...|...+.-|..+...+..+.++-.+. +.....+..+++.+..++..
T Consensus 17 ~~f~~ga~~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~eysl~r---NaqSttiKa~KDi~~sI~~~ 81 (85)
T 2ca5_A 17 ETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYR---NAQSNTVKVIKDVDAAILEH 81 (85)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHh
Confidence 458888888888898888888865422334455566666655554 45666777888888777654
No 80
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=33.92 E-value=1e+02 Score=20.44 Aligned_cols=31 Identities=16% Similarity=0.125 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 110 RVKKITEQVNQRYNNLNTSIINRGKALNSAM 140 (186)
Q Consensus 110 ~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~ 140 (186)
.+...+.++..++..=..........|+..+
T Consensus 61 ~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL 91 (129)
T 3tnu_B 61 NLQNAIADAEQRGELALKDARNKLAELEEAL 91 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 3555555555555544444444444444443
No 81
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=33.14 E-value=1.5e+02 Score=22.09 Aligned_cols=20 Identities=15% Similarity=0.109 Sum_probs=8.2
Q ss_pred HHHHHHHHHhhHHHHHHHHH
Q psy3215 75 QKSIHADLHQFKQQIVLFNQ 94 (186)
Q Consensus 75 ~k~l~~ei~~~~~~~~~l~~ 94 (186)
+.++..+|......+..+.+
T Consensus 92 ~~aL~kEie~~~~~i~~lE~ 111 (256)
T 3na7_A 92 LRSLNIEEDIAKERSNQANR 111 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444433333
No 82
>1pzq_A Erythronolide synthase; four helix bundle, homodimer, transferase; NMR {Saccharopolyspora erythraea} SCOP: a.34.3.1
Probab=32.14 E-value=66 Score=17.67 Aligned_cols=20 Identities=25% Similarity=0.373 Sum_probs=15.1
Q ss_pred cCchhHHHHHHHHHHHHHHH
Q psy3215 105 HDDTTRVKKITEQVNQRYNN 124 (186)
Q Consensus 105 ~~~~~~i~~~l~~l~~rw~~ 124 (186)
++....+..+++.+-.||+.
T Consensus 27 edghddvgqrlesllrrwns 46 (60)
T 1pzq_A 27 EDGHDDVGQRLESLLRRWNS 46 (60)
T ss_dssp SSCCHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhh
Confidence 33456788889888889875
No 83
>1sfc_A VAMP 2, protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=31.73 E-value=99 Score=19.55 Aligned_cols=35 Identities=9% Similarity=0.100 Sum_probs=17.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 109 TRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSL 143 (186)
Q Consensus 109 ~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~ 143 (186)
..|+..++++..-...-...+-+|+.+|+......
T Consensus 33 ~~vq~eldeVk~IM~~NI~kvLeRGEkLd~L~dks 67 (96)
T 1sfc_A 33 QQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRA 67 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 34445555555444444455555555555444433
No 84
>4dey_B Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 1vyt_E
Probab=30.81 E-value=61 Score=21.08 Aligned_cols=23 Identities=22% Similarity=0.631 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHhHh
Q psy3215 142 SLQNFDKSIDNFLAWLSEAESTM 164 (186)
Q Consensus 142 ~~~~f~~~~~~l~~Wl~e~e~~L 164 (186)
..+++..++.-+..||..+|...
T Consensus 23 e~qq~e~~l~GYl~WI~~aE~i~ 45 (106)
T 4dey_B 23 EKQQLEEDLKGYLDWITQAEDID 45 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Confidence 45789999999999999998765
No 85
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=30.18 E-value=1.1e+02 Score=19.52 Aligned_cols=76 Identities=17% Similarity=0.218 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH
Q psy3215 7 TKLREHWDETNNKVMARKTQLDSM------LSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHA 80 (186)
Q Consensus 7 ~~l~~~W~~L~~~~~~r~~~L~~~------l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ 80 (186)
......+..+...+..+-.++... ......+...+++..+-|.+++-.+.+.+| ..=.....+.+.+..
T Consensus 18 e~YE~df~~l~~~i~~kl~~i~~~~~~e~rk~~i~~ie~~ldEA~eLl~qMelE~r~~p~-----s~R~~~~~klr~Yk~ 92 (102)
T 2qyw_A 18 EKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLAEMEEELRYAPL-----TFRNPMMSKLRNYRK 92 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCH-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHH
Confidence 334445555555555555555221 223445677777888888888777765531 111233344555555
Q ss_pred HHHhhHH
Q psy3215 81 DLHQFKQ 87 (186)
Q Consensus 81 ei~~~~~ 87 (186)
++...+.
T Consensus 93 dL~~lk~ 99 (102)
T 2qyw_A 93 DLAKLHR 99 (102)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5554443
No 86
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=29.84 E-value=1.2e+02 Score=19.97 Aligned_cols=46 Identities=9% Similarity=0.083 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHH
Q psy3215 66 DVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQ 120 (186)
Q Consensus 66 ~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~ 120 (186)
..+++.+++...++.|+......++.+... + .+.-.|+.....+..
T Consensus 15 g~vkRL~KE~~~Y~kE~~~q~~kiekmk~e-------~--~dey~iKkq~evL~E 60 (116)
T 3mxz_A 15 STCKRIVKELHSYEKEVEREAAKTADMKDK-------G--ADPYDLKQQENVLGE 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------T--CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------c--CCHHHHHHHHHHHHH
Confidence 457888999999999999888888877653 2 245667776655443
No 87
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=29.80 E-value=1.2e+02 Score=20.08 Aligned_cols=93 Identities=14% Similarity=0.163 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH-
Q psy3215 2 ILHKITKLREHWDETNNKVMARKTQLDSMLSDSQRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHA- 80 (186)
Q Consensus 2 i~~~l~~l~~~W~~L~~~~~~r~~~L~~~l~~~~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~- 80 (186)
|..++..|...+..|..+-..|-.+..+--.....=......+..=+.+....+........--+....++.+++.+..
T Consensus 7 i~~~l~~Leae~q~L~~~E~qry~~eka~AE~A~~~La~~~~l~~~i~er~~~i~~~~~~~~yk~~y~~l~k~Y~~~~ke 86 (119)
T 3etw_A 7 LVGELQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDALKK 86 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999998888888876655544444455555555555555555554443333445556666555544
Q ss_pred ---HHHhhHHHHHHHHH
Q psy3215 81 ---DLHQFKQQIVLFNQ 94 (186)
Q Consensus 81 ---ei~~~~~~~~~l~~ 94 (186)
+|...+..|+.+..
T Consensus 87 Ld~~ik~qekiIdnFE~ 103 (119)
T 3etw_A 87 LEAEMEQQKAVISDFEK 103 (119)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44555555555443
No 88
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=29.69 E-value=2.5e+02 Score=23.45 Aligned_cols=62 Identities=11% Similarity=0.173 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHH
Q psy3215 65 ADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTS 128 (186)
Q Consensus 65 ~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~ 128 (186)
++.+...-.+.+.++.+++..+.....+......+.... +++..+..++..+..+-..+...
T Consensus 32 ~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~--~~~~~l~~~~~~l~~~i~~le~~ 93 (485)
T 3qne_A 32 VDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAK--EDAKDLIAEKEKLSNEKKEIIEK 93 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--ccHHHHHHHHHHHHHHHHHHHHH
Confidence 566666666677777777777766666655544443332 24455555555554444433333
No 89
>2xhe_B Syntaxin1; exocytosis, exocytosis complex, snare, neuro fusion, SM PROT choanoflagellates; 2.80A {Monosiga brevicollis}
Probab=29.39 E-value=1.8e+02 Score=21.88 Aligned_cols=67 Identities=18% Similarity=0.249 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 71 QLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALN 137 (186)
Q Consensus 71 ~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le 137 (186)
-......+..+|......+..|..............+...++..++.+...-..+...+..+.+.|.
T Consensus 46 F~~~~~~I~~~I~~i~~~l~~L~~l~~~~l~t~~~~~~~~~~~~ie~l~~~i~~~~~~i~~~lk~l~ 112 (279)
T 2xhe_B 46 FFNRVKRIRDNIEDIEQAIEQVAQLHTESLVAVSKEDRDRLNEKLQDTMARISALGNKIRADLKQIE 112 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666666666666666555433221111111123445555444444444444444444444
No 90
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=29.27 E-value=71 Score=17.14 Aligned_cols=30 Identities=13% Similarity=0.346 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 111 VKKITEQVNQRYNNLNTSIINRGKALNSAM 140 (186)
Q Consensus 111 i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~ 140 (186)
+-+-+++++.|.+.|..++..-..+|+...
T Consensus 7 mydlvsel~~r~e~LE~Ri~~LE~KLd~L~ 36 (43)
T 2pnv_A 7 MYDMISDLNERSEDFEKRIVTLETKLETLI 36 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 334455566666655555555444444443
No 91
>1n7s_A Vesicle-associated membrane protein 2; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1kil_A 3rk2_A 3rk3_A 3rl0_A 3fii_B 3g94_B
Probab=28.90 E-value=86 Score=17.94 Aligned_cols=38 Identities=8% Similarity=0.123 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 110 RVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFD 147 (186)
Q Consensus 110 ~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~ 147 (186)
.|+..++++..-...-...+-+|+.+|+........+.
T Consensus 8 ~v~~~l~ev~~iM~~NI~~vl~RGekLd~L~~ks~~L~ 45 (63)
T 1n7s_A 8 QTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQ 45 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 34455555555555555555555555555544433333
No 92
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=26.44 E-value=1.3e+02 Score=19.15 Aligned_cols=18 Identities=6% Similarity=0.143 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHhhHHHHH
Q psy3215 73 REQKSIHADLHQFKQQIV 90 (186)
Q Consensus 73 ~~~k~l~~ei~~~~~~~~ 90 (186)
++.+.++.+++..+..+.
T Consensus 51 kk~~~lE~eld~~ee~L~ 68 (101)
T 3u1c_A 51 KQLRVTEDSRDQVLEELH 68 (101)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444555544444443
No 93
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=25.92 E-value=1.2e+02 Score=18.73 Aligned_cols=27 Identities=15% Similarity=0.265 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 19 KVMARKTQLDSMLSDSQRYDAKRQEVD 45 (186)
Q Consensus 19 ~~~~r~~~L~~~l~~~~~f~~~~~~l~ 45 (186)
.+..|+..|.+++..-..++..+..+.
T Consensus 33 lAE~RR~AL~eaL~EN~~Lh~~ie~l~ 59 (83)
T 1uii_A 33 VAEKRRKALYEALKENEKLHKEIEQKD 59 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999999988877776665544
No 94
>3b5n_A Synaptobrevin homolog 1; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae} SCOP: h.1.15.1
Probab=25.86 E-value=98 Score=17.60 Aligned_cols=37 Identities=14% Similarity=0.184 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 110 RVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNF 146 (186)
Q Consensus 110 ~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f 146 (186)
.|+..++++..-...-...+-+|+.+|+........+
T Consensus 6 ~vq~~l~evk~iM~~NI~~vl~RgekLd~L~~ks~~L 42 (61)
T 3b5n_A 6 ELQAEIDDTVGIMRDNINKVAERGERLTSIEDKADNL 42 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 3444555555555555555555555555554443333
No 95
>1ybk_A Tetrabrachion; right hand coiled coil, protein binding; HET: BEQ; 1.45A {Staphylothermus marinus} PDB: 1fe6_A
Probab=24.40 E-value=89 Score=16.64 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=24.0
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 110 RVKKITEQ-VNQRYNNLNTSIINRGKALNSAMS 141 (186)
Q Consensus 110 ~i~~~l~~-l~~rw~~L~~~~~~r~~~Le~~~~ 141 (186)
.|--++.. +.+||+.|.+...-|..+|+..+.
T Consensus 10 divyrltviiddryeslknlitlradrlemiin 42 (52)
T 1ybk_A 10 DIVYRLTVIIDDRYESLKNLITLRADRLEMIIN 42 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEEEccHHHHHHHHHhhhhhhhhhhhc
Confidence 34444433 678999999999999999987754
No 96
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=24.05 E-value=96 Score=16.89 Aligned_cols=26 Identities=8% Similarity=0.137 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 111 VKKITEQVNQRYNNLNTSIINRGKAL 136 (186)
Q Consensus 111 i~~~l~~l~~rw~~L~~~~~~r~~~L 136 (186)
+...++.|..|+..|...-..-..+|
T Consensus 10 Le~~ld~LqTr~ArLlae~~ssq~Kl 35 (46)
T 3swy_A 10 LGSSLDTLQTRFARLLAEYNATQMKM 35 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444443333333333
No 97
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=23.65 E-value=70 Score=17.95 Aligned_cols=9 Identities=11% Similarity=0.003 Sum_probs=3.9
Q ss_pred CCHHHHHHH
Q psy3215 63 YTADVLEVQ 71 (186)
Q Consensus 63 ~d~~~l~~~ 71 (186)
+....++..
T Consensus 48 gevkkveee 56 (67)
T 1lq7_A 48 GEVKKVEEE 56 (67)
T ss_dssp STHHHHHHH
T ss_pred cchhHHHHH
Confidence 444444444
No 98
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=23.17 E-value=2.7e+02 Score=21.77 Aligned_cols=100 Identities=7% Similarity=0.088 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHH
Q psy3215 35 QRYDAKRQEVDGWLTRMENRMQRMNPVGYTADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKI 114 (186)
Q Consensus 35 ~~f~~~~~~l~~WL~~~E~~l~~~~~~~~d~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~ 114 (186)
..|..-++.+..-+++.|..+-..+ . ...+.+.-.++.++-..+..+..+.+....|.......-....+..
T Consensus 191 d~y~~~l~~l~~~id~lE~~v~~~~----~----~~~l~~l~~lrr~l~~lrr~l~p~~~vl~~L~~~~~~~~~~~~~~~ 262 (363)
T 2iub_A 191 DDYFVLLEKIDDEIDVLEEEVLERP----E----KETVQRTHQLKRNLVELRKTIWPLREVLSSLYRDVPPLIEKETVPY 262 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSC----C----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC----C----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHH
Confidence 4577788888888888888875432 1 2345566678888888888888888888888764433335667778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 115 TEQVNQRYNNLNTSIINRGKALNSAMSS 142 (186)
Q Consensus 115 l~~l~~rw~~L~~~~~~r~~~Le~~~~~ 142 (186)
+.++.++-..+...+..-...+......
T Consensus 263 lrDv~d~~~~~~e~~~~~re~l~~l~d~ 290 (363)
T 2iub_A 263 FRDVYDHTIQIADTVETFRDIVSGLLDV 290 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888777777776666543
No 99
>1gl2_A Endobrevin; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=23.16 E-value=1.2e+02 Score=17.54 Aligned_cols=45 Identities=13% Similarity=0.259 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 108 TTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSIDN 152 (186)
Q Consensus 108 ~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~ 152 (186)
-..|+..++++..-...-...+-+|+.+|+........+......
T Consensus 11 l~~vq~~l~evk~iM~~NI~~vL~RgekLd~L~~ks~~L~~~s~~ 55 (65)
T 1gl2_A 11 VRNLQSEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEH 55 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 355666777766666666667777777777666555444444433
No 100
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=22.92 E-value=2.2e+02 Score=20.52 Aligned_cols=18 Identities=11% Similarity=0.287 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy3215 65 ADVLEVQLREQKSIHADL 82 (186)
Q Consensus 65 ~~~l~~~l~~~k~l~~ei 82 (186)
-..++.++..++.+..+.
T Consensus 92 r~~l~~~l~~~~~L~~~~ 109 (192)
T 2p22_C 92 KDKVQALLENARILESKY 109 (192)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344555555555555544
No 101
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=22.76 E-value=1.4e+02 Score=18.25 Aligned_cols=64 Identities=9% Similarity=0.178 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 66 DVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKAL 136 (186)
Q Consensus 66 ~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~L 136 (186)
.+|+..|++ .+.+.+..++..+.+|..+.+.|-... ..|...+..+...-..|...+.-...+.
T Consensus 6 SAVeDKLRr--rl~E~~~q~qaEl~sLrrT~~EL~~G~-----~KL~~mi~~l~~E~~~l~~ni~~lk~K~ 69 (78)
T 3iv1_A 6 SAVSDKLRW--RMKEEMDRAQAELNALKRTEEDLKKGH-----QKLEEMVTRLDQEVAEVDKNIELLKKKD 69 (78)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHHHHHHHhHHHHHHHHHHHHHHhhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555544 577888889999999999988887654 3455555555555555544444444333
No 102
>2nps_A VAMP-4, vesicle-associated membrane protein 4; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Mus musculus}
Probab=22.71 E-value=1.3e+02 Score=17.85 Aligned_cols=44 Identities=16% Similarity=0.262 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 108 TTRVKKITEQVNQRYNNLNTSIINRGKALNSAMSSLQNFDKSID 151 (186)
Q Consensus 108 ~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~~~~~~~~f~~~~~ 151 (186)
-..|+..++++..-...-...+-+|+.+|+........+.....
T Consensus 10 l~~vq~el~ev~~iM~~NI~~vL~RgekLd~L~~ks~~L~~~s~ 53 (74)
T 2nps_A 10 IKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNAT 53 (74)
T ss_dssp SHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 34566666666666666666666666666666555444444433
No 103
>3d5a_X RF1, peptide chain release factor 1; ribosome, ribonucleoprotein, ribosomal protein, RNA-binding, binding, metal-binding, zinc-finger; 3.21A {Thermus thermophilus} PDB: 2b64_Y 3d5c_X 3mr8_V 3ms0_V
Probab=22.68 E-value=2.9e+02 Score=21.97 Aligned_cols=18 Identities=28% Similarity=0.517 Sum_probs=13.7
Q ss_pred hHHHHHHHHHHHHHHHHH
Q psy3215 3 LHKITKLREHWDETNNKV 20 (186)
Q Consensus 3 ~~~l~~l~~~W~~L~~~~ 20 (186)
..++..+..+++.|...+
T Consensus 2 ~~~l~~~~~r~~el~~~~ 19 (354)
T 3d5a_X 2 LDKLDRLEEEYRELEALL 19 (354)
T ss_dssp HHHHHHHTHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHh
Confidence 367888888888887765
No 104
>2dnx_A Syntaxin-12; snare, HABC domain, UP and DOWN three helix bundle, LEFT-handed twist, membrane fusion, vesicle transport, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.41 E-value=1.8e+02 Score=19.33 Aligned_cols=58 Identities=17% Similarity=0.257 Sum_probs=39.0
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 78 IHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKALNS 138 (186)
Q Consensus 78 l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~Le~ 138 (186)
+-..|......+..|......|.. +.|...+++++..+...-..+...+....+.|..
T Consensus 19 is~~I~~In~~vs~l~r~v~~LGT---~kDt~~LR~kl~~~~~~t~~l~k~ts~~lk~L~~ 76 (130)
T 2dnx_A 19 CSGNIQRISQATAQIKNLMSQLGT---KQDSSKLQENLQQLQHSTNQLAKETNELLKELGS 76 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCS---SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC---CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555555555666666666555543 4467888888888877777777777776666665
No 105
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=21.59 E-value=3.5e+02 Score=22.45 Aligned_cols=38 Identities=8% Similarity=0.087 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhc
Q psy3215 66 DVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVY 103 (186)
Q Consensus 66 ~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~ 103 (186)
..|..++...+.|+.-|......|..|......=+..|
T Consensus 125 ~kVd~qi~~IrvLq~~l~~q~skIQRLE~dI~~q~~~C 162 (491)
T 1m1j_A 125 QRVATQVNRIKALQNSIQEQVVEMKRLEVDIDIKIRAC 162 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34666777788888888888888888866655555554
No 106
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=21.27 E-value=1.6e+02 Score=18.29 Aligned_cols=29 Identities=17% Similarity=0.339 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy3215 66 DVLEVQLREQKSIHADLHQFKQQIVLFNQ 94 (186)
Q Consensus 66 ~~l~~~l~~~k~l~~ei~~~~~~~~~l~~ 94 (186)
+.+....+..+.++..|+.|+..|..|..
T Consensus 51 ~el~~h~~ei~~le~~i~rhk~~i~~l~~ 79 (84)
T 1gmj_A 51 NEISHHAKEIERLQKEIERHKQSIKKLKQ 79 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34555666666666777777666666543
No 107
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=20.80 E-value=1.9e+02 Score=19.15 Aligned_cols=52 Identities=12% Similarity=0.208 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhHHHHHhHhhhhHHHh
Q psy3215 120 QRYNNLNTSIINRGKALNSAMSS---LQNFDKSIDNFLAWLSEAESTMECVEVET 171 (186)
Q Consensus 120 ~rw~~L~~~~~~r~~~Le~~~~~---~~~f~~~~~~l~~Wl~e~e~~L~~~~~~~ 171 (186)
.....+...+.+|..+|...... -.+|..-+..+.+-+...+..+..-+..+
T Consensus 44 ~~~~~m~~~i~ek~~~i~~~~~~~~yK~eY~~L~KkYk~~~~~Ld~eI~~qe~iI 98 (119)
T 2avr_X 44 AQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDALKKLEAEMEQQKAVI 98 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666777777777664321 11333334444444444444444433333
No 108
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=20.57 E-value=2.9e+02 Score=22.39 Aligned_cols=65 Identities=14% Similarity=0.184 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 65 ADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIIN 131 (186)
Q Consensus 65 ~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~ 131 (186)
++.+...-.+.+.++.+++..+..-..+......+.... ++...+..++..+..+-..+...+.+
T Consensus 29 ~~~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~ 93 (425)
T 2dq3_A 29 VDKVLELDKRRREIIKRLEALRSERNKLSKEIGKLKREG--KDTTEIQNRVKELKEEIDRLEEELRK 93 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSSC--SCTTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666777777777777777766666655443332222 34445555555554444444333333
No 109
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=20.49 E-value=3.6e+02 Score=22.12 Aligned_cols=70 Identities=9% Similarity=0.065 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3215 65 ADVLEVQLREQKSIHADLHQFKQQIVLFNQLTQKLISVYQHDDTTRVKKITEQVNQRYNNLNTSIINRGKAL 136 (186)
Q Consensus 65 ~~~l~~~l~~~k~l~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~r~~~L 136 (186)
++.+...-.+.+.++.+++..+..-..+......+.... ++...+..++..+..+-..+...+.+-...|
T Consensus 30 ~~~~~~l~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (455)
T 2dq0_A 30 VDEILKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKKG--EPVDELLAKSREIVKRIGELENEVEELKKKI 99 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577777777788888888888777777766555544332 3556666666666655555444444433333
Done!