BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy322
(182 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 90/172 (52%), Gaps = 33/172 (19%)
Query: 25 VRPENDETICREDIHSHPN-IEIVITDLEYVRPENDETICREDIH-------RQYKAVEL 76
++PEN + E + S N I+I I DL C D H R+Y++ E+
Sbjct: 158 IKPEN---VLMEIVDSPENLIQIKIADLG--------NACWYDEHYTNSIQTREYRSPEV 206
Query: 77 IYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMD 136
+ + DIWSTACL FEL+TGD++F P E YT D+ HI +II+L+ E+P L+
Sbjct: 207 LLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLR 266
Query: 137 NERCIR---NIKVLLERDQHNITSMNAKDNFYR---ILAKSYKIPKEDAKQL 182
N + R N + LL NI+ + F+ +L + YK K++AK++
Sbjct: 267 NGKYTRTFFNSRGLLR----NISKL----KFWPLEDVLTEKYKFSKDEAKEI 310
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 90/172 (52%), Gaps = 33/172 (19%)
Query: 25 VRPENDETICREDIHSHPN-IEIVITDLEYVRPENDETICREDIH-------RQYKAVEL 76
++PEN + E + S N I+I I DL C D H R+Y++ E+
Sbjct: 158 IKPEN---VLMEIVDSPENLIQIKIADLG--------NACWYDEHYTNSIQTREYRSPEV 206
Query: 77 IYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMD 136
+ + DIWSTACL FEL+TGD++F P E YT D+ HI +II+L+ E+P L+
Sbjct: 207 LLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLR 266
Query: 137 NERCIR---NIKVLLERDQHNITSMNAKDNFYR---ILAKSYKIPKEDAKQL 182
N + R N + LL NI+ + F+ +L + YK K++AK++
Sbjct: 267 NGKYTRTFFNSRGLLR----NISKL----KFWPLEDVLTEKYKFSKDEAKEI 310
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKI 123
EDI RQY+++E++ + DIWSTAC+ FEL TGDY+F P + Y+ DE HI I
Sbjct: 244 EDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHI 303
Query: 124 IQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL 182
I+L+ IP + + + R +H IT + + + +L + Y P EDA Q
Sbjct: 304 IELLGSIPRHFALSGKYSREFFNRRGELRH-ITKLKPW-SLFDVLVEKYGWPHEDAAQF 360
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKI 123
EDI RQY+++E++ ++ DIWSTAC+ FEL TGDY+F P + YT DE HI I
Sbjct: 252 EDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALI 311
Query: 124 IQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDA 179
I+L+ ++P L+ + + + D +IT + + +L + Y+ +E+A
Sbjct: 312 IELLGKVPRKLIVAGKYSKEF-FTKKGDLKHITKLKPW-GLFEVLVEKYEWSQEEA 365
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKI 123
EDI RQY+++E++ ++ DIWSTAC+ FEL TGDY+F P + YT DE HI I
Sbjct: 236 EDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALI 295
Query: 124 IQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDA 179
I+L+ ++P L+ + + + D +IT + + +L + Y+ +E+A
Sbjct: 296 IELLGKVPRKLIVAGKYSKEF-FTKKGDLKHITKLKPW-GLFEVLVEKYEWSQEEA 349
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 41.6 bits (96), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 48 ITDLEYVRPENDETICREDIHR-QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN 106
I DL Y + + +C E + QY A EL+ K++ + +D WS L FE +TG F
Sbjct: 166 IIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG---FR 222
Query: 107 PFESKYYTIDEH 118
PF + + H
Sbjct: 223 PFLPNWQPVQWH 234
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 41.6 bits (96), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 48 ITDLEYVRPENDETICREDIHR-QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN 106
I DL Y + + +C E + QY A EL+ K++ + +D WS L FE +TG F
Sbjct: 165 IIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG---FR 221
Query: 107 PFESKYYTIDEH 118
PF + + H
Sbjct: 222 PFLPNWQPVQWH 233
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA 128
RQY+A E+I +D+ D+WS C+ EL TG +F E H+ + ++
Sbjct: 223 RQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM------EHLAMMESIIQ 276
Query: 129 EIPPNLM 135
IP N++
Sbjct: 277 PIPKNML 283
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 58 NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTID 116
N IC R Y+A ELI+ + IDIWST C+ EL+ G +F P ES ID
Sbjct: 198 NVSXIC----SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF-PGES---GID 249
Query: 117 EHHILKIIQLMA 128
+ +++II+++
Sbjct: 250 Q--LVEIIKVLG 259
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 58 NDETICREDIHR-----------QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN 106
D +C+E IH +Y A E++ + +D WS L ++++TG F
Sbjct: 163 TDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
Query: 107 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKD 162
E++ TID KI++ +PP L R + +K LL+R+ + D
Sbjct: 223 G-ENRKKTID-----KILKCKLNLPPYLTQEARDL--LKKLLKRNAASRLGAGPGD 270
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 58 NDETICREDIHR-----------QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN 106
D +C+E IH +Y A E++ + +D WS L ++++TG F
Sbjct: 163 TDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
Query: 107 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKD 162
E++ TID KI++ +PP L R + +K LL+R+ + D
Sbjct: 223 G-ENRKKTID-----KILKCKLNLPPYLTQEARDL--LKKLLKRNAASRLGAGPGD 270
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 24/144 (16%)
Query: 45 EIVITDLEYVR---PENDET--ICREDIHRQYKAVELIY-TKEFDMKIDIWSTACLTFEL 98
++ I D R PE+D T + R Y+A E++ +K + IDIWS C+ E+
Sbjct: 182 DLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Query: 99 VTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSM 158
++ + F K+Y +HIL I+ ++ ++ CI N+K ++ + S+
Sbjct: 242 LSNRPI---FPGKHYLDQLNHILGILGSPSQ------EDLNCIINMKA-----RNYLQSL 287
Query: 159 NAKDNFYRILAKSYKIPKEDAKQL 182
+K +A + PK D+K L
Sbjct: 288 PSKTK----VAWAKLFPKSDSKAL 307
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILK-IIQLM 127
R Y+A E+I + M ID+WS C+ EL+TG Y P E DE L +I+L+
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGE------DEGDQLACMIELL 315
Query: 128 AEIPPNLMDNERCIRNI 144
L+D + +N
Sbjct: 316 GMPSQKLLDASKRAKNF 332
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILK-IIQLM 127
R Y+A E+I + M ID+WS C+ EL+TG Y P E DE L +I+L+
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGE------DEGDQLACMIELL 315
Query: 128 AEIPPNLMDNERCIRNI 144
L+D + +N
Sbjct: 316 GMPSQKLLDASKRAKNF 332
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILK-IIQLM 127
R Y+A E+I + M ID+WS C+ EL+TG Y P E DE L +I+L+
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGE------DEGDQLACMIELL 315
Query: 128 AEIPPNLMDNERCIRNI 144
L+D + +N
Sbjct: 316 GMPXQKLLDASKRAKNF 332
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA 128
R Y++ E++ +D+ ID+WS C+ E+ TG+ +F S +D+ + KI++++
Sbjct: 203 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF----SGANEVDQMN--KIVEVLG 256
Query: 129 EIPPNLMD 136
P +++D
Sbjct: 257 IPPAHILD 264
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA 128
R Y++ E++ +D+ ID+WS C+ E+ TG+ +F S +D+ + KI++++
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF----SGANEVDQMN--KIVEVLG 275
Query: 129 EIPPNLMD 136
P +++D
Sbjct: 276 IPPAHILD 283
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA 128
R Y++ E++ +D+ ID+WS C+ E+ TG+ +F S +D+ + KI++++
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF----SGANEVDQMN--KIVEVLG 275
Query: 129 EIPPNLMDN 137
P +++D
Sbjct: 276 IPPAHILDQ 284
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 69 RQYKAVEL-IYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A EL + E+ ID+WS C+ EL+ G +F S +ID+ +++IIQ+M
Sbjct: 205 RFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF----SGETSIDQ--LVRIIQIM 258
Query: 128 A 128
Sbjct: 259 G 259
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 192
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 245
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 246 IIKLEYDFPEKFFPKAR 262
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN 106
+ R Y+A E+I + +DIWS C+ ELV G +F
Sbjct: 185 VTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ 224
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 65 EDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
E + R Y+A E+I + +DIWS C+ E++ G +F
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E++ G +F
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++M +DIWS C+ EL+TG
Sbjct: 192 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
Query: 104 MF 105
+F
Sbjct: 251 LF 252
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN 106
+ R Y+A E+I + +DIWS C+ ELV G +F
Sbjct: 187 VTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQ 226
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E++ G +F
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 206 QLVRGEPNVSXIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 260
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 261 SG---VDQ--LVEIIKVLG 274
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 191 QLVRGEPNVSXIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 245
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 246 SG---VDQ--LVEIIKVLG 259
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 184 QLVRGEPNVSXIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 238
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 239 SG---VDQ--LVEIIKVLG 252
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 192
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E I K
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG---LPPFRAG----NEGLIFAK 245
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 246 IIKLEYDFPEKFFPKAR 262
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 180 QLVRGEPNVSXIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 234
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 235 SG---VDQ--LVEIIKVLG 248
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 267
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 268 SQ------EDLNCIINLKA 280
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 267
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 268 SQ------EDLNCIINLKA 280
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMF 105
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F
Sbjct: 172 QLVRGEPNVSXIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 184 QLVRGEPNVSXIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 238
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 239 SG---VDQ--LVEIIKVLG 252
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 142 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 193
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 246
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 247 IIKLEYDFPEKFFPKAR 263
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 138 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 189
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 242
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 243 IIKLEYDFPEKFFPKAR 259
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMF 105
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F
Sbjct: 172 QLVRGEPNVSXIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 251
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 252 SQ------EDLNCIINLKA 264
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 144 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 195
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 248
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 249 IIKLEYDFPAAFFPKAR 265
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMF 105
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F
Sbjct: 173 QLVRGEPNVSXIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMF 105
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F
Sbjct: 172 QLVRGEPNVSXIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 251
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 252 SQ------EDLNCIINLKA 264
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMF 105
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F
Sbjct: 172 QLVRGEPNVSXIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 252
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 253 SQ------EDLNCIINLKA 265
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 249
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 250 SQ------EDLNCIINLKA 262
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 251
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 252 SQ------EDLNCIINLKA 264
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMF 105
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F
Sbjct: 176 QLVRGEPNVSXIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 255
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 256 SQ------EDLNCIINLKA 268
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 247
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 248 SQ------EDLNCIINLKA 260
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 247
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 248 SQ------EDLNCIINLKA 260
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA 128
R Y+A E+I + D+WS C+ FE G +F +++ H+ + +++
Sbjct: 217 RHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNR------EHLAMMERILG 270
Query: 129 EIPPNLMDNER 139
IP ++ R
Sbjct: 271 PIPSRMIRKTR 281
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 251
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 252 SQ------EDLNCIINLKA 264
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 245
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 246 SQ------EDLNCIINLKA 258
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 249
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 250 SQ------EDLNCIINLKA 262
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 252
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 253 SQ------EDLNCIINLKA 265
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 253
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 254 SQ------EDLNCIINLKA 266
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 244
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 245 SQ------EDLNCIINLKA 257
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 251
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 252 SQ------EDLNCIINLKA 264
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 251
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 252 SQ------EDLNCIINLKA 264
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGILGSP 247
Query: 128 AEIPPNLMDNERCIRNIKV 146
++ ++ CI N+K
Sbjct: 248 SQ------EDLNCIINLKA 260
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R + D + + R Y+A E+I + +DIWS C+ E++TG
Sbjct: 166 ELKILDFGLAR-QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
Query: 104 MFN 106
+F
Sbjct: 225 LFK 227
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 190
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 243
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 244 IIKLEYDFPEKFFPKAR 260
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R D + + R Y+A E+I + ++ +DIWS C+ E++TG
Sbjct: 182 ELKILDFGLAR-HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
Query: 104 MFNPFESKYYTIDEHHILKI 123
+ F+ K Y ILK+
Sbjct: 241 L---FKGKDYLDQLTQILKV 257
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 192
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 245
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 246 IIKLEYDFPEKFFPKAR 262
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R D + + R Y+A E+I + ++ +DIWS C+ E++TG
Sbjct: 164 ELKILDFGLAR-HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
Query: 104 MFNPFESKYYTIDEHHILKI 123
+ F+ K Y ILK+
Sbjct: 223 L---FKGKDYLDQLTQILKV 239
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 192
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 245
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 246 IIKLEYDFPEKFFPKAR 262
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 190
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 243
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 244 IIKLEYDFPEKFFPKAR 260
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 190
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 243
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 244 IIKLEYDFPEKFFPKAR 260
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 142 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 193
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 194 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 246
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 247 IIKLEYDFPEKFFPKAR 263
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 138 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 189
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 242
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 243 IIKLEYDFPEKFFPKAR 259
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 192
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 245
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 246 IIKLEYDFPEKFFPKAR 262
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 251 QLVRGEPNVSYIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 305
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 306 SG---VDQ--LVEIIKVLG 319
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 139 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 190
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 243
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 244 IIKLEYDFPEKFFPKAR 260
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEI 130
Y E+I K D K+D+W L +E + G PF+S +T E H +I+ + +
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG---MPPFDSPSHT--ETH-RRIVNVDLKF 231
Query: 131 PPNLMDNER 139
PP L D +
Sbjct: 232 PPFLSDGSK 240
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 177 QLVRGEPNVSYIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 231
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 232 SG---VDQ--LVEIIKVLG 245
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEI 130
Y E+I K D K+D+W L +E + G PF+S +T E H +I+ + +
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG---MPPFDSPSHT--ETH-RRIVNVDLKF 231
Query: 131 PPNLMDNER 139
PP L D +
Sbjct: 232 PPFLSDGSK 240
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 123 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 174
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 227
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 228 IIKLEYDFPEKFFPKAR 244
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 210 QLVRGEPNVSYIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 264
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 265 SG---VDQ--LVEIIKVLG 278
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 146 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 197
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 250
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 251 IIKLEYDFPEKFFPKAR 267
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEI 130
Y E+I K D K+D+W L +E + G PF+S +T E H +I+ + +
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG---MPPFDSPSHT--ETH-RRIVNVDLKF 232
Query: 131 PPNLMDNER 139
PP L D +
Sbjct: 233 PPFLSDGSK 241
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 206 QLVRGEPNVSYIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 260
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 261 SG---VDQ--LVEIIKVLG 274
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 208 QLVRGEPNVSYIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 262
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 263 SG---VDQ--LVEIIKVLG 276
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 117 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 168
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 221
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 222 IIKLEYDFPEKFFPKAR 238
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 200 QLVRGEPNVSYIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 254
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 255 SG---VDQ--LVEIIKVLG 268
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 116 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 167
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 220
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 221 IIKLEYDFPEKFFPKAR 237
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFE 109
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F P +
Sbjct: 185 QLVRGEPNVSYIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGD 239
Query: 110 SKYYTIDEHHILKIIQLMA 128
S +D+ +++II+++
Sbjct: 240 SG---VDQ--LVEIIKVLG 253
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 118 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 169
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 222
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 223 IIKLEYDFPEKFFPKAR 239
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMF 105
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F
Sbjct: 172 QLVRGEPNVSYIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 119 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 170
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E+ I K
Sbjct: 171 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEYLIFQK 223
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 224 IIKLEYDFPEKFFPKAR 240
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMF 105
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F
Sbjct: 172 QLVRGEPNVSYIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 52 EYVRPE-NDETICREDIHRQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMF 105
+ VR E N IC R Y+A ELI+ ++ ID+WS C+ EL+ G +F
Sbjct: 172 QLVRGEPNVSYIC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 43 NIEIVITDLEYVR--PENDETICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVT 100
N+EI I D + R P +++ + Y A EL+ +D D+WS + + +++
Sbjct: 145 NLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS 204
Query: 101 GDYMFNPFES 110
G PF+S
Sbjct: 205 GQV---PFQS 211
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA 128
R Y+ E+I + D+WS C+ FE G +F E++ H++ + +++
Sbjct: 212 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR------EHLVMMEKILG 265
Query: 129 EIPPNLMDNER 139
IP +++ R
Sbjct: 266 PIPSHMIHRTR 276
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 183 ELKILDFGLARHTDDEMXGXVAT-RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 104 MF 105
+F
Sbjct: 242 LF 243
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA 128
R Y+ E+I + D+WS C+ FE G +F E++ H++ + +++
Sbjct: 203 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR------EHLVMMEKILG 256
Query: 129 EIPPNLMDNER 139
IP +++ R
Sbjct: 257 PIPSHMIHRTR 267
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 169 ELKILDFGLARHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 104 MF 105
+F
Sbjct: 228 LF 229
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA 128
R Y+ E+I + D+WS C+ FE G +F E++ H++ + +++
Sbjct: 235 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR------EHLVMMEKILG 288
Query: 129 EIPPNLMDNER 139
IP +++ R
Sbjct: 289 PIPSHMIHRTR 299
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 169 ELKILDFGLARHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 104 MF 105
+F
Sbjct: 228 LF 229
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 159 ELKILDFGLARHTDDE-MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 104 MF 105
+F
Sbjct: 218 LF 219
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 30/137 (21%)
Query: 18 VITDLEYV----------RPENDETICREDIHSHPNIEIVITDLEYVR---PENDETICR 64
+++ LEY+ +PEN + ED+H I ITD + PE+ +
Sbjct: 141 IVSALEYLHGKGIIHRDLKPEN--ILLNEDMH------IQITDFGTAKVLSPESKQARAN 192
Query: 65 EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHIL-K 122
+ QY + EL+ K D+W+ C+ ++LV G PF + +E I K
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAG----NEGLIFAK 245
Query: 123 IIQLMAEIPPNLMDNER 139
II+L + P R
Sbjct: 246 IIKLEYDFPEKFFPKAR 262
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 183 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 104 MF 105
+F
Sbjct: 242 LF 243
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 165 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 104 MF 105
+F
Sbjct: 224 LF 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 161 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
Query: 104 MF 105
+F
Sbjct: 220 LF 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 182 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
Query: 104 MF 105
+F
Sbjct: 241 LF 242
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 186 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
Query: 104 MF 105
+F
Sbjct: 245 LF 246
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 69 RQYKAVELIYTKE-FDMKIDIWSTACLTFELVTGDYMF 105
R Y+A ELI+ + + +DIWS C+ E++ G+ +F
Sbjct: 195 RYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 159 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 104 MF 105
+F
Sbjct: 218 LF 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 182 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
Query: 104 MF 105
+F
Sbjct: 241 LF 242
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKII 124
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGIL 246
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 160 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
Query: 104 MF 105
+F
Sbjct: 219 LF 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 183 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 104 MF 105
+F
Sbjct: 242 LF 243
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 175 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
Query: 104 MF 105
+F
Sbjct: 234 LF 235
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 159 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 104 MF 105
+F
Sbjct: 218 LF 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 169 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 104 MF 105
+F
Sbjct: 228 LF 229
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 169 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 104 MF 105
+F
Sbjct: 228 LF 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKII 124
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGIL 244
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKII 124
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGIL 244
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKII 124
R Y+A E ++ +K + IDIWS C+ E+++ + F K+Y +HIL I+
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI---FPGKHYLDQLNHILGIL 242
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 168 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 104 MF 105
+F
Sbjct: 227 LF 228
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 160 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
Query: 104 MF 105
+F
Sbjct: 219 LF 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 175 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
Query: 104 MF 105
+F
Sbjct: 234 LF 235
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 168 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 104 MF 105
+F
Sbjct: 227 LF 228
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 159 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 104 MF 105
+F
Sbjct: 218 LF 219
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 175 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
Query: 104 MF 105
+F
Sbjct: 234 LF 235
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 168 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 104 MF 105
+F
Sbjct: 227 LF 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 173 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
Query: 104 MF 105
+F
Sbjct: 232 LF 233
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 174 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
Query: 104 MF 105
+F
Sbjct: 233 LF 234
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 174 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
Query: 104 MF 105
+F
Sbjct: 233 LF 234
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 165 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 104 MF 105
+F
Sbjct: 224 LF 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 165 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 104 MF 105
+F
Sbjct: 224 LF 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 168 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 104 MF 105
+F
Sbjct: 227 LF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 162 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
Query: 104 MF 105
+F
Sbjct: 221 LF 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 170 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 104 MF 105
+F
Sbjct: 229 LF 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 165 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 104 MF 105
+F
Sbjct: 224 LF 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA 128
R Y+A E+I + D+WS C+ E G +F +SK H+ + +++
Sbjct: 198 RHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK------EHLAMMERILG 251
Query: 129 EIPPNLMDNER 139
+P +++ R
Sbjct: 252 PLPKHMIQKTR 262
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA 128
R Y+A E+I + D+WS C+ E G +F +SK H+ + +++
Sbjct: 198 RHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK------EHLAMMERILG 251
Query: 129 EIPPNLMDNER 139
+P +++ R
Sbjct: 252 PLPKHMIQKTR 262
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 186 ELKILDFGLARHTDDEMXGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
Query: 104 MF 105
+F
Sbjct: 245 LF 246
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A + L+ ++ + IDIWS C+ E++TG +F
Sbjct: 164 TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.7 bits (78), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDAGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 34.7 bits (78), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R + DE + R Y+A E++ ++ +DIWS C+ EL+ G
Sbjct: 169 ELRILDFGLAR-QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
Query: 104 MF 105
+F
Sbjct: 228 LF 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 34.7 bits (78), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R + DE + R Y+A E++ ++ +DIWS C+ EL+ G
Sbjct: 169 ELRILDFGLAR-QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
Query: 104 MF 105
+F
Sbjct: 228 LF 229
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFGLCRHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKI-IQLMAE 129
Y E+I + + K+D+W L +EL+ G+ PFES + I+K+ ++ A
Sbjct: 187 YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGN---PPFESASHNETYRRIVKVDLKFPAS 243
Query: 130 IPPNLMD 136
+P D
Sbjct: 244 VPTGAQD 250
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R + DE + R Y+A E++ ++ +DIWS C+ EL+ G
Sbjct: 161 ELRILDFGLAR-QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
Query: 104 MF 105
+F
Sbjct: 220 LF 221
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 170 ELKILDFGLARHTADE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 104 MF 105
+F
Sbjct: 229 LF 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 170 ELKILDFGLARHTADE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 104 MF 105
+F
Sbjct: 229 LF 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 170 ELKILDFGLARHTADE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 104 MF 105
+F
Sbjct: 229 LF 230
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDFYLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDYGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A + L+ +K++ +DIWS C+ E++TG +F
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A + L+ +K++ +DIWS C+ E++TG +F
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDGGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 EIVITDLEYVRPENDETICREDIHRQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDY 103
E+ I D R +DE + R Y+A E++ ++ +DIWS C+ EL+TG
Sbjct: 163 ELKILDRGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 104 MF 105
+F
Sbjct: 222 LF 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 33.5 bits (75), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 65 EDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
E + R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILF 225
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.5 bits (75), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 76 LIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDE--HHILKIIQL-MAEIPP 132
L+ + ++ +ID+W C+ +E+ TG +F T++E H I +I+ E P
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG-----STVEEQLHFIFRILGTPTEETWP 226
Query: 133 NLMDNE 138
++ NE
Sbjct: 227 GILSNE 232
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 47 VITDLEYVRPENDETICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN 106
+ T +EY E +T+C Y A E++ K ++D+WS C+ + L+ G
Sbjct: 163 LATKVEY-DGERKKTLCGTP---NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---P 215
Query: 107 PFES 110
PFE+
Sbjct: 216 PFET 219
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 47 VITDLEYVRPENDETICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN 106
+ T +EY E +T+C Y A E++ K ++D+WS C+ + L+ G
Sbjct: 167 LATKVEY-DGERKKTLCGTP---NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---P 219
Query: 107 PFES 110
PFE+
Sbjct: 220 PFET 223
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 69 RQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYMF 105
R Y+A E++ ++ +DIWS C+ EL+TG +F
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 33.5 bits (75), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 47 VITDLEYVRPENDETICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN 106
+ T +EY E +T+C Y A E++ K ++D+WS C+ + L+ G
Sbjct: 163 LATKVEY-DGERKKTLCGTP---NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---P 215
Query: 107 PFES 110
PFE+
Sbjct: 216 PFET 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS + E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS + E++ G +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.1 bits (74), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 73 AVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF 108
A E++ + D K+D+WS+ C+ ++ G + + F
Sbjct: 259 APEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQF 294
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 33.1 bits (74), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 57 ENDETICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFES 110
E +T+C Y A E++ K ++DIWS C+ + L+ G PFE+
Sbjct: 197 ERKKTLCGTP---NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFET 244
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 33.1 bits (74), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 67 IHRQYKAVELIYTKE-FDMKIDIWSTACLTFELVT 100
+ R Y+A ELI +E + IDIWST C+ EL+
Sbjct: 213 VTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.1 bits (74), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 73 AVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF 108
A E++ + D K+D+WS+ C+ ++ G + + F
Sbjct: 240 APEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQF 275
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 48 ITDLEYVRPENDETICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP 107
ITD R + T + A E+I F D+WS L +EL+TG+ F
Sbjct: 157 ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
Query: 108 FES 110
+
Sbjct: 217 IDG 219
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A + L+ +K++ IDIWS C+ E+V G +F
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A + L+ +K++ IDIWS C+ E+V G +F
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A + L+ +K++ IDIWS C+ E+V G +F
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLF 201
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 32.7 bits (73), Expect = 0.11, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAE 129
Y A E++ + + D W+ CL +E++ G +PF+ + I + ++++ + E
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ---SPFQQRKKKIKREEVERLVKEVPE 406
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 32.7 bits (73), Expect = 0.11, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAE 129
Y A E++ + + D W+ CL +E++ G +PF+ + I + ++++ + E
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ---SPFQQRKKKIKREEVERLVKEVPE 406
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 186 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 224
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 65 EDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
E + R Y+A E+I + +D+WS C+ E+V +F
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 225
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +DIWS C+ E+V +F
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 73 AVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF 108
A E++ K D K+DIWS+ C+ ++ G + + +
Sbjct: 224 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 73 AVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF 108
A E++ K D K+DIWS+ C+ ++ G + + +
Sbjct: 240 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 275
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 73 AVELIYTKEFDMKIDIWSTACLTFELVTG 101
A E++ K D K+DIWS+ C+ ++ G
Sbjct: 238 APEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 67 IHRQYKAVELIYTKE-FDMKIDIWSTACLTFELVT 100
+ R Y+A ELI +E + IDIWST C+ EL+
Sbjct: 218 VTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEI 130
+ A ELI + ++DIWS + E+V G E Y+ +K+I+ +
Sbjct: 313 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG-------EPPYFNEPPLKAMKMIR--DNL 363
Query: 131 PPNLMDNERCIRNIKVLLER 150
PP L + + ++K L+R
Sbjct: 364 PPRLKNLHKVSPSLKGFLDR 383
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEI 130
+ A ELI + ++DIWS + E+V G E Y+ +K+I+ +
Sbjct: 236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG-------EPPYFNEPPLKAMKMIR--DNL 286
Query: 131 PPNLMDNERCIRNIKVLLER 150
PP L + + ++K L+R
Sbjct: 287 PPRLKNLHKVSPSLKGFLDR 306
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEI 130
Y + E+ K ++ K DIW+ C+ +EL T + F K + +LKII
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK------NLVLKIIS--GSF 242
Query: 131 PPNLMDNERCIRN-IKVLLERDQHNITSMNA 160
PP + +R+ + L +R+ + S+N+
Sbjct: 243 PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNS 273
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +D+WS C+ E+V +F
Sbjct: 192 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 230
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 67 IHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
+ R Y+A E+I + +D+WS C+ E+V +F
Sbjct: 181 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 219
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 12/60 (20%)
Query: 52 EYVRPENDE-TICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFES 110
EY+ P+ E + R+D ++Y A +D+WS + TG F PFE
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGAT-----------VDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEI 130
+ A ELI + ++DIWS + E+V G E Y+ +K+I+ +
Sbjct: 193 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG-------EPPYFNEPPLKAMKMIR--DNL 243
Query: 131 PPNLMDNERCIRNIKVLLER 150
PP L + + ++K L+R
Sbjct: 244 PPRLKNLHKVSPSLKGFLDR 263
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEI 130
+ A ELI + ++DIWS + E+V G E Y+ +K+I+ +
Sbjct: 191 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG-------EPPYFNEPPLKAMKMIR--DNL 241
Query: 131 PPNLMDNERCIRNIKVLLER 150
PP L + + ++K L+R
Sbjct: 242 PPRLKNLHKVSPSLKGFLDR 261
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFES 110
Y A E++ K ++D+WS C+ + L+ G PFE+
Sbjct: 205 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---PPFET 241
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFES 110
Y A E++ K ++D+WS C+ + L+ G PFE+
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---PPFET 243
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFES 110
Y A E++ K ++D+WS C+ + L+ G PFE+
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---PPFET 217
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEI 130
+ A ELI + ++DIWS + E+V G E Y+ +K+I+ +
Sbjct: 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG-------EPPYFNEPPLKAMKMIR--DNL 232
Query: 131 PPNLMDNERCIRNIKVLLER 150
PP L + + ++K L+R
Sbjct: 233 PPRLKNLHKVSPSLKGFLDR 252
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEI 130
+ A ELI + ++DIWS + E+V G E Y+ +K+I+ +
Sbjct: 186 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG-------EPPYFNEPPLKAMKMIR--DNL 236
Query: 131 PPNLMDNERCIRNIKVLLER 150
PP L + + ++K L+R
Sbjct: 237 PPRLKNLHKVSPSLKGFLDR 256
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 12/60 (20%)
Query: 52 EYVRPENDE-TICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFES 110
EY+ P+ E + R+D ++Y A +D+WS + TG F PFE
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGAT-----------VDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFES 110
Y A E++ K ++DIWS C+ + L+ G PFE+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFET 244
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFES 110
Y A E++ K ++DIWS C+ + L+ G PFE+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFET 244
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFES 110
Y A E++ K ++DIWS C+ + L+ G PFE+
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFET 228
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
R Y A E + + ++ DIWS EL G Y P ++K
Sbjct: 177 RSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAK 219
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 237
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 237
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF---NPFESKY 112
+ A E++ K + K+DIWS + E++ G+ + NP + Y
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF---NPFESKY 112
+ A E++ K + K+DIWS + E++ G+ + NP + Y
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF---NPFESKY 112
+ A E++ K + K+DIWS + E++ G+ + NP + Y
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 227
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF---NPFESKY 112
+ A E++ K + K+DIWS + E++ G+ + NP + Y
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF---NPFESKY 112
+ A E++ K + K+DIWS + E++ G+ + NP + Y
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 227
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 69 RQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLM 127
R Y+A EL+ + E+ ID+WS C+ E++ + F K Y H L++I ++
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL---FPGKNYV----HQLQLIMMV 279
Query: 128 AEIP 131
P
Sbjct: 280 LGTP 283
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 214
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 211
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 211
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 189 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 228
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 211
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 43 NIEIVITDLEYVR-----PENDETICREDIH-RQYKAVELIYT-KEFDMKIDIWSTACLT 95
N E+ I D R P + E + R Y+A EL+ + E+ ID+WS C+
Sbjct: 194 NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIF 253
Query: 96 FELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIP 131
E++ + F K Y H L++I ++ P
Sbjct: 254 GEMLARRQL---FPGKNYV----HQLQLIMMVLGTP 282
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 211
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 216
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 211
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 214
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 211
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 212
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 171 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 69 RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMF 105
R Y+A EL+ ++ +D+W+ CL E+ G+ +F
Sbjct: 188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF 225
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 201 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 255
Query: 104 MFNPF 108
+ PF
Sbjct: 256 -YPPF 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 211
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 215
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 214
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 216
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 216
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 213
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 211
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 212
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Query: 43 NIEIVITDLEY---VRPENDETICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELV 99
N E+ I D + +T+C Y E+I + D K+D+WS L +E +
Sbjct: 148 NGELKIADFGWSVHAPSSRRDTLCGT---LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 204
Query: 100 TGDYMFNPFESKYY 113
G PFE+ Y
Sbjct: 205 VG---MPPFEAHTY 215
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 235
Query: 104 MFNPF 108
+ PF
Sbjct: 236 -YPPF 239
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWTLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 235
Query: 104 MFNPF 108
+ PF
Sbjct: 236 -YPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 69 RQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
R Y+A E L+ + ++ ID+WS C+ E++ G +F
Sbjct: 194 RWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 71 YKAVELIYTKEFDM-KIDIWSTACLTFELVTGDYMFN 106
Y A EL K++D ++D+WS + + LV+G F+
Sbjct: 176 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 235
Query: 104 MFNPF 108
+ PF
Sbjct: 236 -YPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 235
Query: 104 MFNPF 108
+ PF
Sbjct: 236 -YPPF 239
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 71 YKAVELIYTKEFDM-KIDIWSTACLTFELVTGDYMFN 106
Y A EL K++D ++D+WS + + LV+G F+
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 201 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 255
Query: 104 MFNPF 108
+ PF
Sbjct: 256 -YPPF 259
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 235
Query: 104 MFNPF 108
+ PF
Sbjct: 236 -YPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IKVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 235
Query: 104 MFNPF 108
+ PF
Sbjct: 236 -YPPF 239
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E+I + D K+D+WS L +E + G PFE+ Y
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---MPPFEAHTY 215
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 235
Query: 104 MFNPF 108
+ PF
Sbjct: 236 -YPPF 239
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IKVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 71 YKAVELIYTKEFDM-KIDIWSTACLTFELVTGDYMFN 106
Y A EL K++D ++D+WS + + LV+G F+
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 235
Query: 104 MFNPF 108
+ PF
Sbjct: 236 -YPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 235
Query: 104 MFNPF 108
+ PF
Sbjct: 236 -YPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 235
Query: 104 MFNPF 108
+ PF
Sbjct: 236 -YPPF 239
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 173 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 227
Query: 104 MFNPF 108
+ PF
Sbjct: 228 -YPPF 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 173 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 227
Query: 104 MFNPF 108
+ PF
Sbjct: 228 -YPPF 231
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 71 YKAVELIYTKEFDM-KIDIWSTACLTFELVTGDYMFN 106
Y A EL K++D ++D+WS + + LV+G F+
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 201 IQVTDFGFAKRVKGATWTLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 255
Query: 104 MFNPF 108
+ PF
Sbjct: 256 -YPPF 259
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 71 YKAVELIYTKEFDM-KIDIWSTACLTFELVTGDYMFN 106
Y A EL K++D ++D+WS + + LV+G F+
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 166 IQVTDFGFAKRVKGRTWTLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 220
Query: 104 MFNPF 108
+ PF
Sbjct: 221 -YPPF 224
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 71 YKAVELIYTKEFDM-KIDIWSTACLTFELVTGDYMFN 106
Y A EL K++D ++D+WS + + LV+G F+
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 235
Query: 104 MFNPF 108
+ PF
Sbjct: 236 -YPPF 239
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 64 REDIHRQYKAVELI----YTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHH 119
R+ R Y A E I + +D++ D+WS +EL TG + + + S +
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD------ 237
Query: 120 ILKIIQLMAEIPPNLMDNE 138
++ Q++ PP L ++E
Sbjct: 238 --QLTQVVKGDPPQLSNSE 254
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 71 YKAVELIYTKEFDM-KIDIWSTACLTFELVTGDYMFN 106
Y A EL K++D ++D+WS + + LV+G F+
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 71 YKAVELIYTKEFDM-KIDIWSTACLTFELVTGDYMFN 106
Y A EL K++D ++D+WS + + LV+G F+
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 175 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 229
Query: 104 MFNPF 108
+ PF
Sbjct: 230 -YPPF 233
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 167 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 221
Query: 104 MFNPF 108
+ PF
Sbjct: 222 -YPPF 225
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 71 YKAVELIYTKEFDM-KIDIWSTACLTFELVTGDYMFN 106
Y A EL K++D ++D+WS + + LV+G F+
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYY 113
Y E I + D K+D+WS L +E + G PFE+ Y
Sbjct: 177 YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK---PPFEANTY 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 166 TYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 30.4 bits (67), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF---NPFESKYYTIDEHHI 120
QY + E D + D++S C+ +E++TG+ F +P Y + E I
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI 237
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 30.4 bits (67), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 159 TYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQ-LM 127
R Y + E + + ++ DIWS E+ G Y P ++K + I +++ ++
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIV 226
Query: 128 AEIPPNL 134
E PP L
Sbjct: 227 NEPPPKL 233
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 71 YKAVELIYTKEFDM-KIDIWSTACLTFELVTGDYMFN 106
Y A EL K++D ++D+WS + + LV+G F+
Sbjct: 171 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 30.4 bits (67), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF---NPFESKYYTIDEHHI 120
QY + E D + D++S C+ +E++TG+ F +P Y + E I
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI 237
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF---NPFESKYYTIDEHHI 120
QY + E D + D++S C+ +E++TG+ F +P Y + E I
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +E+ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIIISKGYNKAVDWWALGVLIYEMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF---NPFESKYYTIDEHHI 120
QY + E D + D++S C+ +E++TG+ F +P Y + E I
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI 237
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 163 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 166 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF---NPFESKYYTIDE 117
QY + E D + D++S C+ +E++TG+ F +P Y + E
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 251
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 71 YKAVELIY-TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHH 119
Y+A EL+ + + IDIW+ C+ EL+T + +F+ + T + +H
Sbjct: 201 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 160 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 61 TICREDIHRQYKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
T E + Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3NU1|A Chain A, Structure Of Holo Form Of A Periplasmic Heme Binding
Protein
pdb|3NU1|B Chain B, Structure Of Holo Form Of A Periplasmic Heme Binding
Protein
Length = 254
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 19 ITDLEYVRPENDETICREDIHSHPNIEIVITDLEYVRPENDETI 62
+T++ Y DE + R+ P + D+ Y+R N E I
Sbjct: 11 VTEIAYALGAGDEIVARDSTSQQPQAAQKLPDVGYMRTLNAEGI 54
>pdb|3MD9|A Chain A, Structure Of Apo Form Of A Periplasmic Heme Binding
Protein
pdb|3MD9|B Chain B, Structure Of Apo Form Of A Periplasmic Heme Binding
Protein
Length = 255
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 19 ITDLEYVRPENDETICREDIHSHPNIEIVITDLEYVRPENDETI 62
+T++ Y DE + R+ P + D+ Y+R N E I
Sbjct: 12 VTEIAYALGAGDEIVARDSTSQQPQAAQKLPDVGYMRTLNAEGI 55
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVT 100
Y + E I+ ++ K DIWS CL +E+
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 46 IVITDLEYVRPENDETICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
I +TD + + T +Y A E+I +K ++ +D W+ L +E+ G +
Sbjct: 180 IQVTDFGFAKRVKGRTWXLAGTP-EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---Y 235
Query: 106 NPF 108
PF
Sbjct: 236 PPF 238
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
QY + E D + D++S C+ +E++TG+ F
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 46 IVITDLEYVRPENDETICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
I +TD + + T +Y A E+I +K ++ +D W+ L +E+ G +
Sbjct: 180 IQVTDFGFAKRVKGRTWXLXGTP-EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---Y 235
Query: 106 NPF 108
PF
Sbjct: 236 PPF 238
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 30.0 bits (66), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 30.0 bits (66), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 30.0 bits (66), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 30.0 bits (66), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 30.0 bits (66), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 30.0 bits (66), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 67 IHRQYKAVELIY-TKEFDMKIDIWSTACLTFELV 99
+ R Y+A EL++ + + + +D+W+ C+ EL+
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 29.6 bits (65), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 46 IVITDLEYVRPENDET--ICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY 103
I +TD + + T +C +Y A E+I +K ++ +D W+ L +++ G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTP---EYLAPEIILSKGYNKAVDWWALGVLIYQMAAG-- 234
Query: 104 MFNPF 108
+ PF
Sbjct: 235 -YPPF 238
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 29.6 bits (65), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 67 IHRQYKAVELIYTKE-FDMKIDIWSTACLTFELV 99
+ R Y+A ELI +E + ID+WS C+ EL+
Sbjct: 245 VTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 29.6 bits (65), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 71 YKAVE-LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
Y+A E L+ K + +DIWS C+ E+VT +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.6 bits (65), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF 108
+Y A E+I +K ++ +D W+ L +E+ G + PF
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPF 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF 108
+Y A E+I +K ++ +D W+ L +E+ G + PF
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF 108
+Y A E+I +K ++ +D W+ L +E+ G + PF
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPF 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF 108
+Y A E+I +K ++ +D W+ L +E+ G + PF
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPF 239
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF 108
+Y A E+I +K ++ +D W+ L +E+ G + PF
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF 108
+Y A E+I +K ++ +D W+ L +E+ G + PF
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPF 238
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
+Y A E++ + D WS L FE++TG PF+ K
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL---PFQGK 230
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
+Y A E++ + D WS L FE++TG PF+ K
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL---PFQGK 229
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 69 RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNP-FESKYYTIDEHHILKIIQL 126
R Y+A E++ T ++ +D+WS C+ EL ++ P F + Y H +L I +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL----FLRRPIFPGRDY---RHQLLLIFGI 238
Query: 127 MAEIPPNLMDNERCIRNIKV 146
+ P+ ++ RCI + +
Sbjct: 239 IGT--PHSDNDLRCIESPRA 256
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 69 RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNP-FESKYYTIDEHHILKIIQL 126
R Y+A E++ T ++ +D+WS C+ EL ++ P F + Y H +L I +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL----FLRRPIFPGRDY---RHQLLLIFGI 238
Query: 127 MAEIPPNLMDNERCIRNIKV 146
+ P+ ++ RCI + +
Sbjct: 239 IGT--PHSDNDLRCIESPRA 256
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
+Y A E++ + D WS L FE++TG PF+ K
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSL---PFQGK 233
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 69 RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNP-FESKYYTIDEHHILKIIQL 126
R Y+A E++ T ++ +D+WS C+ EL ++ P F + Y H +L I +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL----FLRRPIFPGRDY---RHQLLLIFGI 238
Query: 127 MAEIPPNLMDNERCIRNIKV 146
+ P+ ++ RCI + +
Sbjct: 239 IGT--PHSDNDLRCIESPRA 256
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 82 FDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA-EIPPNLMDNERC 140
+D D +S C+ F+L+ G +PF ++ T D+H I ++ MA E+P + R
Sbjct: 368 YDSSADWFSLGCMLFKLLRGH---SPFR-QHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 141 IRNIKVLLERD 151
+ ++ LL+RD
Sbjct: 424 L--LEGLLQRD 432
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 82 FDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA-EIPPNLMDNERC 140
+D D +S C+ F+L+ G +PF ++ T D+H I ++ MA E+P + R
Sbjct: 367 YDSSADWFSLGCMLFKLLRGH---SPFR-QHKTKDKHEIDRMTLTMAVELPDSFSPELRS 422
Query: 141 IRNIKVLLERD 151
+ ++ LL+RD
Sbjct: 423 L--LEGLLQRD 431
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 70 QYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
+Y A E++ + D WS L FE++TG PF+ K
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL---PFQGK 229
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 29.3 bits (64), Expect = 1.3, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 82 FDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA-EIPPNLMDNERC 140
+D D +S C+ F+L+ G +PF ++ T D+H I ++ MA E+P + R
Sbjct: 368 YDSSADWFSLGCMLFKLLRGH---SPFR-QHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 141 IRNIKVLLERD 151
+ ++ LL+RD
Sbjct: 424 L--LEGLLQRD 432
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 29.3 bits (64), Expect = 1.3, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 82 FDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA-EIPPNLMDNERC 140
+D D +S C+ F+L+ G +PF ++ T D+H I ++ MA E+P + R
Sbjct: 368 YDSSADWFSLGCMLFKLLRGH---SPFR-QHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 141 IRNIKVLLERD 151
+ ++ LL+RD
Sbjct: 424 L--LEGLLQRD 432
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
R Y + E + + ++ DIWS E+ G Y P ++K
Sbjct: 229 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 271
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
R Y + E + + ++ DIWS E+ G Y P ++K
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 41 HPNIEIVITDLEYVRPENDETICREDIHRQYKAVELI-YTKEFDMKIDIWSTACLTFELV 99
H +++I+ D + + P + + + Y A E++ T ++ KID++S + FE++
Sbjct: 167 HRSLDILKLDSQNL-PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Query: 100 TGDYMFNPFESKYYTIDEHHILKIIQLMA-EIPPNLMDNERCIRN--IKVLLERD 151
PF + ++ +ILK ++ ++ E PP+ DN+ + I++L++ D
Sbjct: 226 Y------PFST---GMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHD 271
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 71 YKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAE 129
Y+ EL+ +++ ID+W C+ E+ T + ++H + I QL
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG------NTEQHQLALISQLCGS 248
Query: 130 IPPNLMDN 137
I P + N
Sbjct: 249 ITPEVWPN 256
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
R Y + E + + ++ DIWS E+ G Y P ++K
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 41 HPNIEIVITDLEYVRPENDETICREDIHRQYKAVELI-YTKEFDMKIDIWSTACLTFELV 99
H +++I+ D + + P + + + Y A E++ T ++ KID++S + FE++
Sbjct: 167 HRSLDILKLDSQNL-PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Query: 100 TGDYMFNPFESKYYTIDEHHILKIIQLMA-EIPPNLMDNERCIRN--IKVLLERD 151
PF + ++ +ILK ++ ++ E PP+ DN+ + I++L++ D
Sbjct: 226 Y------PFST---GMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHD 271
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGD 102
+ A E+I +D K DIWS EL G+
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
R Y + E + + ++ DIWS E+ G Y P ++K
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 236
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
+ A E++ + +D DIWS L + ++TG + PF +
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTG---YTPFANG 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
R Y + E + + ++ DIWS E+ G Y P ++K
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 69 RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
R Y + E + + ++ DIWS E+ G Y P ++K
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEI 130
+ A E+I + ++DIWS + E+V G E Y++ +K +L
Sbjct: 207 WMAPEVISRSLYATEVDIWSLGIMVIEMVDG-------EPPYFSDSPVQAMK--RLRDSP 257
Query: 131 PPNLMDNERCIRNIKVLLER 150
PP L ++ + ++ LER
Sbjct: 258 PPKLKNSHKVSPVLRDFLER 277
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 76 LIYTKEFDMKIDIWSTACLTFELVTGDYMF 105
L+ + ID+W+ C+ E++TG +F
Sbjct: 196 LLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 71 YKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAE 129
Y+ EL+ +++ ID+W C+ E+ T + ++H + I QL
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG------NTEQHQLALISQLCGS 248
Query: 130 IPPNLMDN 137
I P + N
Sbjct: 249 ITPEVWPN 256
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 71 YKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAE 129
Y+ EL+ +++ ID+W C+ E+ T + ++H + I QL
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG------NTEQHQLALISQLCGS 248
Query: 130 IPPNLMDN 137
I P + N
Sbjct: 249 ITPEVWPN 256
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 71 YKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAE 129
Y+ EL+ +++ ID+W C+ E+ T + ++H + I QL
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG------NTEQHQLALISQLCGS 247
Query: 130 IPPNLMDN 137
I P + N
Sbjct: 248 ITPEVWPN 255
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 25 VRPENDETICREDIHSHPNIEIVITDLEYVRPENDETICREDIHRQYKAVELIYTKEFDM 84
++PEN I +D H I+I+ L + ++DE Y A E ++ ++
Sbjct: 150 LKPEN---ILFQDTSPHSPIKIIDFGLAELF-KSDEHSTNAAGTALYMAPE-VFKRDVTF 204
Query: 85 KIDIWSTACLTFELVTG 101
K DIWS + + L+TG
Sbjct: 205 KCDIWSAGVVMYFLLTG 221
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK-----YYTIDEHHI 120
Y A E+I + + +D W+ L +E++ G PFE + + +I EH++
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ---APFEGEDEDELFQSIMEHNV 238
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
Y + E + ++ K DIWS CL +EL F F K
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
Y + E + ++ K DIWS CL +EL F F K
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK 111
Y + E + ++ K DIWS CL +EL F F K
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 69 RQYKAVELIY-TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEH-HILKIIQL 126
R +K EL+ +++D +D+WS C+ ++ + PF +Y D H ++KI ++
Sbjct: 210 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPF---FYGHDNHDQLVKIAKV 263
Query: 127 MA 128
+
Sbjct: 264 LG 265
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 25 VRPENDETICREDIHSHPNIEIVITDLEYVRPENDETICREDIHRQYKAVELIYTKEFDM 84
V+PEN +E + + +TD + + + Y A E++ +++D
Sbjct: 154 VKPENLLYTSKEK-----DAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDK 208
Query: 85 KIDIWSTACLTFELVTGDYMFNPFES 110
D+WS + + L+ G F PF S
Sbjct: 209 SCDMWSLGVIMYILLCG---FPPFYS 231
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 69 RQYKAVELIY-TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEH-HILKIIQL 126
R +K EL+ +++D +D+WS C+ ++ + PF +Y D H ++KI ++
Sbjct: 191 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPF---FYGHDNHDQLVKIAKV 244
Query: 127 MA 128
+
Sbjct: 245 LG 246
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 69 RQYKAVELIY-TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEH-HILKIIQL 126
R +K EL+ +++D +D+WS C+ ++ + PF +Y D H ++KI ++
Sbjct: 190 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPF---FYGHDNHDQLVKIAKV 243
Query: 127 MA 128
+
Sbjct: 244 LG 245
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 69 RQYKAVELIY-TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEH-HILKIIQL 126
R +K EL+ +++D +D+WS C+ ++ + PF +Y D H ++KI ++
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPF---FYGHDNHDQLVKIAKV 242
Query: 127 MA 128
+
Sbjct: 243 LG 244
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 69 RQYKAVELIY-TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEH-HILKIIQL 126
R +K EL+ +++D +D+WS C+ ++ + PF +Y D H ++KI ++
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPF---FYGHDNHDQLVKIAKV 242
Query: 127 MA 128
+
Sbjct: 243 LG 244
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 69 RQYKAVELIY-TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEH-HILKIIQL 126
R +K EL+ +++D +D+WS C+ ++ + PF +Y D H ++KI ++
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPF---FYGHDNHDQLVKIAKV 242
Query: 127 MA 128
+
Sbjct: 243 LG 244
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 69 RQYKAVELIY-TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEH-HILKIIQL 126
R +K EL+ +++D +D+WS C+ ++ + PF +Y D H ++KI ++
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPF---FYGHDNHDQLVKIAKV 242
Query: 127 MA 128
+
Sbjct: 243 LG 244
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 25 VRPENDETICREDIHSHPNIEIVITDLEYVRPENDETICREDIHRQYKAVELIYTKEFDM 84
V+PEN +E + + +TD + + + Y A E++ +++D
Sbjct: 135 VKPENLLYTSKEK-----DAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDK 189
Query: 85 KIDIWSTACLTFELVTGDYMFNPFES 110
D+WS + + L+ G F PF S
Sbjct: 190 SCDMWSLGVIMYILLCG---FPPFYS 212
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 69 RQYKAVELIY-TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEH-HILKIIQL 126
R +K EL+ +++D +D+WS C+ ++ + PF +Y D H ++KI ++
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPF---FYGHDNHDQLVKIAKV 242
Query: 127 MA 128
+
Sbjct: 243 LG 244
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 69 RQYKAVELIY-TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEH-HILKIIQL 126
R +K EL+ +++D +D+WS C+ ++ + PF +Y D H ++KI ++
Sbjct: 190 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPF---FYGHDNHDQLVKIAKV 243
Query: 127 MA 128
+
Sbjct: 244 LG 245
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 69 RQYKAVELIY-TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEH-HILKIIQL 126
R +K EL+ +++D +D+WS C+ ++ + PF +Y D H ++KI ++
Sbjct: 189 RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI---FRKEPF---FYGHDNHDQLVKIAKV 242
Query: 127 MA 128
+
Sbjct: 243 LG 244
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 26.9 bits (58), Expect = 6.6, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 71 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESK-----YYTIDEHHI 120
Y A E+I + + +D W+ L +E++ G PFE + + +I EH++
Sbjct: 508 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ---APFEGEDEDELFQSIMEHNV 559
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 24/104 (23%)
Query: 18 VITDLEYVRPENDETICREDIHSH-----PNIEIVITDLEYVR--------PENDETICR 64
+ + + Y+ N I D++SH N +V+ D R PE ++ +
Sbjct: 117 IASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKK 173
Query: 65 EDIHRQYKAV--------ELIYTKEFDMKIDIWSTACLTFELVT 100
D ++Y V E+I + +D K+D++S + E++
Sbjct: 174 PDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,754,987
Number of Sequences: 62578
Number of extensions: 230743
Number of successful extensions: 1113
Number of sequences better than 100.0: 429
Number of HSP's better than 100.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 690
Number of HSP's gapped (non-prelim): 502
length of query: 182
length of database: 14,973,337
effective HSP length: 93
effective length of query: 89
effective length of database: 9,153,583
effective search space: 814668887
effective search space used: 814668887
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 48 (23.1 bits)