BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3224
(1278 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91YR7|PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mus musculus GN=Prpf6 PE=2 SV=1
Length = 941
Score = 1251 bits (3236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/1065 (61%), Positives = 781/1065 (73%), Gaps = 151/1065 (14%)
Query: 227 VNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEE 286
+N+ KK F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND DDRHA P KR D+
Sbjct: 1 MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM 60
Query: 287 EDDE------EDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYR 340
+ ++ EDLND+N+DEFNGY GSLF+ PY+KDDEEAD IY +DKRMDE+RK+ R
Sbjct: 61 KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR 120
Query: 341 EKRLREELERYRQERPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFT 400
E+R +EE+E+YR ERPKIQQQFSDLKR L V+ +EW ++PEVGDARN++QRNPR EK T
Sbjct: 121 EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT 180
Query: 401 PLPDSVLRGNL-GGESTGAIDPN------------SGLMSQIPGTATPGMLTP-SGDLDL 446
P+PDS +L GE+ ++DP GL + PG TPG++TP +G+LD+
Sbjct: 181 PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM 240
Query: 447 RKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKS 506
RK+GQARNTLM+++L+Q+SDSV GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS
Sbjct: 241 RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS 300
Query: 507 VRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARA 566
VRETNP+HPPAWIASARLEEVTGK+Q ARNLIMKG E SED+WLEAARLQP DTA+A
Sbjct: 301 VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA 360
Query: 567 VIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDAR 626
V+AQAVRH+P SVRI+I+AA+LET+ +AK+RV RKALEH+PNSVRLWKAAVELE+PEDAR
Sbjct: 361 VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR 420
Query: 627 ILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNN 686
I+LSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDR IW TAAKLEEA+GN
Sbjct: 421 IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT 480
Query: 687 AMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRK 746
MV+KIIDRA++SL ANGVEINRE W ++A E ++AGSV TCQA++RA+IG G+E+EDRK
Sbjct: 481 QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK 540
Query: 747 HTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKA 806
HTWMEDA+SC A ECARAIYA AL FP
Sbjct: 541 HTWMEDADSCVAHNALECARAIYAYALQVFP----------------------------- 571
Query: 807 VAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMG 866
+KKS+WLRAAYFEKNHGTRESLE LLQ+AVAHCPK+EVL
Sbjct: 572 -----------------SKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVL---- 610
Query: 867 AKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGA 926
WL G ++ WLA + AR +LA A
Sbjct: 611 ----WLMG------------------AKSKWLAG--------DVPAARSILALA------ 634
Query: 927 FQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERA 986
FQANPNSEEIWLAAVKLESENNEYERARRLLAKAR+SAPT RV ++S KLEW L N+ A
Sbjct: 635 FQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNISAA 694
Query: 987 LQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEE 1046
+L +EA++ + DF KLWMMKGQIEEQ L++KA + ++Q +KKCPHS PLW++L+ LEE
Sbjct: 695 QELCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEE 754
Query: 1047 RRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILW 1106
+ L +AR++LEK RL+NP LWL ++R+E RAGLK+IANT+MAKALQECPN+GILW
Sbjct: 755 KIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814
Query: 1107 AEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTK 1166
+EA+FLE RPQRKTKSVDALKKCEHDPHVLLAV+KLFW
Sbjct: 815 SEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFW---------------------- 852
Query: 1167 SVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIING 1226
E K K REWF+RTVKID DLGDAWA+FYKFE+ +G
Sbjct: 853 -----------------------SERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHG 889
Query: 1227 TEETQAEVKKRCLAAEPKHGENWCRVAKNVSNWKLPRETILSLVA 1271
TEE Q EV+KRC AEP+HGE WC V+K+++NW+ IL LVA
Sbjct: 890 TEEQQEEVRKRCENAEPRHGELWCAVSKDITNWQRKIGEILVLVA 934
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 123/154 (79%), Gaps = 6/154 (3%)
Query: 61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEEEDD 120
K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND DDRHA P KR D+ + +
Sbjct: 4 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKN 63
Query: 121 E------EDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYREKR 174
+ EDLND+N+DEFNGY GSLF+ PY+KDDEEAD IY +DKRMDE+RK+ RE+R
Sbjct: 64 QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 123
Query: 175 LREELERYRQERPKIQQQFSDLKRGLVTVSMDEW 208
+EE+E+YR ERPKIQQQFSDLKR L V+ +EW
Sbjct: 124 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEW 157
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 41/53 (77%)
Query: 24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS P ++A
Sbjct: 262 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 314
>sp|A1A5S1|PRP6_RAT Pre-mRNA-processing factor 6 OS=Rattus norvegicus GN=Prpf6 PE=2 SV=1
Length = 941
Score = 1249 bits (3233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/1065 (61%), Positives = 781/1065 (73%), Gaps = 151/1065 (14%)
Query: 227 VNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEE 286
+N+ KK F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND DDRHA P KR D+
Sbjct: 1 MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM 60
Query: 287 EDDE------EDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYR 340
+ ++ EDLND+N+DEFNGY GSLF+ PY+KDDEEAD IY +DKRMDE+RK+ R
Sbjct: 61 KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR 120
Query: 341 EKRLREELERYRQERPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFT 400
E+R +EE+E+YR ERPKIQQQFSDLKR L V+ +EW ++PEVGDARN++QRNPR EK T
Sbjct: 121 EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT 180
Query: 401 PLPDSVLRGNL-GGESTGAIDPN------------SGLMSQIPGTATPGMLTP-SGDLDL 446
P+PDS +L GE+ ++DP GL + PG TPG++TP +G+LD+
Sbjct: 181 PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM 240
Query: 447 RKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKS 506
RK+GQARNTLM+++L+Q+SDSV GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS
Sbjct: 241 RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS 300
Query: 507 VRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARA 566
VRETNP+HPPAWIASARLEEVTGK+Q ARNLIMKG E SED+WLEAARLQP DTA+A
Sbjct: 301 VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA 360
Query: 567 VIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDAR 626
V+AQAVRH+P SVRI+I+AA+LET+ +AK+RV RKALEH+PNSVRLWKAAVELE+PEDAR
Sbjct: 361 VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR 420
Query: 627 ILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNN 686
I+LSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDR IW TAAKLEEA+GN
Sbjct: 421 IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT 480
Query: 687 AMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRK 746
MV+KIIDRA++SL ANGVEINRE W ++A E ++AGSV TCQA++RA+IG G+E+EDRK
Sbjct: 481 QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK 540
Query: 747 HTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKA 806
HTWMEDA+SC A ECARAIYA AL FP
Sbjct: 541 HTWMEDADSCVAHNALECARAIYAYALQVFP----------------------------- 571
Query: 807 VAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMG 866
+KKS+WLRAAYFEKNHGTRESLE LLQ+AVAHCPK+EVL
Sbjct: 572 -----------------SKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVL---- 610
Query: 867 AKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGA 926
WL G ++ WLA + AR +LA A
Sbjct: 611 ----WLMG------------------AKSKWLAG--------DVPAARSILALA------ 634
Query: 927 FQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERA 986
FQANPNSEEIWLAAVKLESENNEYERARRLLAKAR+SAPT RV ++S KLEW L N+ A
Sbjct: 635 FQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNITAA 694
Query: 987 LQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEE 1046
+L +EA++ + DF KLWMMKGQIEEQ L+++A + ++Q +KKCPHS PLW++L+ LEE
Sbjct: 695 QELCEEALRHYEDFPKLWMMKGQIEEQGELMERAREAYNQGLKKCPHSTPLWLLLSRLEE 754
Query: 1047 RRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILW 1106
+ L +AR++LEK RL+NP LWL ++R+E RAGLK+IANT+MAKALQECPN+GILW
Sbjct: 755 KIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814
Query: 1107 AEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTK 1166
+EA+FLE RPQRKTKSVDALKKCEHDPHVLLAV+KLFW
Sbjct: 815 SEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFW---------------------- 852
Query: 1167 SVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIING 1226
E K K REWF+RTVKID DLGDAWA+FYKFE+ +G
Sbjct: 853 -----------------------SERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHG 889
Query: 1227 TEETQAEVKKRCLAAEPKHGENWCRVAKNVSNWKLPRETILSLVA 1271
TEE Q EV+KRC AEP+HGE WC V+K+++NW+ IL LVA
Sbjct: 890 TEEQQEEVRKRCENAEPRHGELWCAVSKDITNWQRKIGEILVLVA 934
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 123/154 (79%), Gaps = 6/154 (3%)
Query: 61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEEEDD 120
K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND DDRHA P KR D+ + +
Sbjct: 4 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKN 63
Query: 121 E------EDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYREKR 174
+ EDLND+N+DEFNGY GSLF+ PY+KDDEEAD IY +DKRMDE+RK+ RE+R
Sbjct: 64 QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 123
Query: 175 LREELERYRQERPKIQQQFSDLKRGLVTVSMDEW 208
+EE+E+YR ERPKIQQQFSDLKR L V+ +EW
Sbjct: 124 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEW 157
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 41/53 (77%)
Query: 24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS P ++A
Sbjct: 262 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 314
>sp|O94906|PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Homo sapiens GN=PRPF6 PE=1 SV=1
Length = 941
Score = 1232 bits (3188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1065 (60%), Positives = 778/1065 (73%), Gaps = 151/1065 (14%)
Query: 227 VNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEE 286
+N+ KK F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND DDRHA P KR D+
Sbjct: 1 MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM 60
Query: 287 EDDE------EDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYR 340
+ ++ EDLND+N+DEFNGY GSLF+ PY+KDDEEAD IY +DKRMDE+RK+ R
Sbjct: 61 KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR 120
Query: 341 EKRLREELERYRQERPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFT 400
E+R +EE+E+YR ERPKIQQQFSDLKR L V+ +EW ++PEVGDARN++QRNPR EK T
Sbjct: 121 EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT 180
Query: 401 PLPDSVLRGNL-GGESTGAIDPN------------SGLMSQIPGTATPGMLTP-SGDLDL 446
P+PDS +L GE+ ++DP GL + PG TPG++TP +G+LD+
Sbjct: 181 PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM 240
Query: 447 RKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKS 506
RK+GQARNTLM+++L+Q+SDSV GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS
Sbjct: 241 RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS 300
Query: 507 VRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARA 566
VRETNP+HPPAWIASARLEEVTGK+Q ARNLIMKG E SED+WLEAARLQP DTA+A
Sbjct: 301 VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA 360
Query: 567 VIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDAR 626
V+AQAVRH+P SVRI+I+AA+LET+ +AK+RV RKALEH+PNSVRLWKAAVELE+PEDAR
Sbjct: 361 VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR 420
Query: 627 ILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNN 686
I+LSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDR IW TAAKLEEA+GN
Sbjct: 421 IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT 480
Query: 687 AMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRK 746
MV+KIIDRA++SL ANGVEINRE W ++A E ++AGSV TCQA++RA+IG G+E+EDRK
Sbjct: 481 QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK 540
Query: 747 HTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKA 806
HTWMEDA+SC A ECA RA Y
Sbjct: 541 HTWMEDADSCVAHNALECA-------------------RAIY------------------ 563
Query: 807 VAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMG 866
+ + +KKS+WLRAAYFEKNHGTRESLE LLQ+AVAHCPK+EVL
Sbjct: 564 ---------AYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVL---- 610
Query: 867 AKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGA 926
WL G ++ WLA + AR +LA A
Sbjct: 611 ----WLMG------------------AKSKWLAG--------DVPAARSILALA------ 634
Query: 927 FQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERA 986
FQANPNSEEIWLAAVKLESEN+EYERARRLLAKAR+SAPT RV ++S KLEW DN+ A
Sbjct: 635 FQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAA 694
Query: 987 LQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEE 1046
L +EA++ + DF KLWMMKGQIEEQK +++KA + ++Q +KKCPHS PLW++L+ LEE
Sbjct: 695 QDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEE 754
Query: 1047 RRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILW 1106
+ L +AR++LEK RL+NP LWL ++R+E RAGLK+IANT+MAKALQECPN+GILW
Sbjct: 755 KIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814
Query: 1107 AEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTK 1166
+EAIFLE RPQR+TKSVDALKKCEHDPHVLLAV+KLFW
Sbjct: 815 SEAIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFW---------------------- 852
Query: 1167 SVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIING 1226
+ K K REWF+RTVKID DLGDAWA+FYKFE+ +G
Sbjct: 853 -----------------------SQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHG 889
Query: 1227 TEETQAEVKKRCLAAEPKHGENWCRVAKNVSNWKLPRETILSLVA 1271
TEE Q EV+KRC +AEP+HGE WC V+K+++NW+ IL LVA
Sbjct: 890 TEEQQEEVRKRCESAEPRHGELWCAVSKDIANWQKKIGDILRLVA 934
Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 123/154 (79%), Gaps = 6/154 (3%)
Query: 61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEEEDD 120
K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND DDRHA P KR D+ + +
Sbjct: 4 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKN 63
Query: 121 E------EDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYREKR 174
+ EDLND+N+DEFNGY GSLF+ PY+KDDEEAD IY +DKRMDE+RK+ RE+R
Sbjct: 64 QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 123
Query: 175 LREELERYRQERPKIQQQFSDLKRGLVTVSMDEW 208
+EE+E+YR ERPKIQQQFSDLKR L V+ +EW
Sbjct: 124 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEW 157
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 41/53 (77%)
Query: 24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS P ++A
Sbjct: 262 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 314
>sp|Q2KJJ0|PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bos taurus GN=PRPF6 PE=2 SV=1
Length = 941
Score = 1231 bits (3185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/1065 (61%), Positives = 780/1065 (73%), Gaps = 151/1065 (14%)
Query: 227 VNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEE 286
+N+ KK F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND DDRHA P KR D+
Sbjct: 1 MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM 60
Query: 287 EDDE------EDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYR 340
+ + EDLND+N+DEFNGY GSLF+ PY+KDDEEAD IY +DKRMDE+RK+ R
Sbjct: 61 KKSQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR 120
Query: 341 EKRLREELERYRQERPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFT 400
E+R +EE+E+YR ERPKIQQQFSDLKR L V+ +EW ++PEVGDARN++QRNPR EK T
Sbjct: 121 EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT 180
Query: 401 PLPDSVLRGNL-GGESTGAIDPN------------SGLMSQIPGTATPGMLTP-SGDLDL 446
P+PDS +L GE+ ++DP GL + PG TPG++TP +G+LD+
Sbjct: 181 PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM 240
Query: 447 RKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKS 506
RK+GQARNTLM+++L+Q+SDSV GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS
Sbjct: 241 RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS 300
Query: 507 VRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARA 566
VRETNP+HPPAWIASARLEEVTGK+Q ARNLIMKG E SED+WLEAARLQP DTA+A
Sbjct: 301 VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA 360
Query: 567 VIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDAR 626
V+AQAVRH+P SVRI+I+AA+LET+ +AK+RV RKALEH+PNSVRLWKAAVELE+PEDAR
Sbjct: 361 VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR 420
Query: 627 ILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNN 686
I+LSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDR IW TAAKLEEA+GN
Sbjct: 421 IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT 480
Query: 687 AMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRK 746
MV+KIIDRA++SL ANGVEINRE W ++A E +KAGSV TCQA++RA+IG G+E+EDRK
Sbjct: 481 QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRK 540
Query: 747 HTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKA 806
HTWMEDA+SC A ECARAIYA AL FP
Sbjct: 541 HTWMEDADSCVAHNALECARAIYAYALQVFP----------------------------- 571
Query: 807 VAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMG 866
+KKS+WLRAAYFEKNHGTRESLE LLQ+AVAHCPK+EVL
Sbjct: 572 -----------------SKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVL---- 610
Query: 867 AKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGA 926
WL G ++ WLA + AR +LA A
Sbjct: 611 ----WLMG------------------AKSKWLAG--------DVPAARSILALA------ 634
Query: 927 FQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERA 986
FQANPNSEEIWLAAVKLESENNEYERARRLLAKAR+SAPT RV ++S KLEW L NL A
Sbjct: 635 FQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNLVAA 694
Query: 987 LQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEE 1046
+L +EA+K + DF KLWMMKGQIEEQ+ L++KA + ++Q +KKCPHS PLW++L+ LEE
Sbjct: 695 QELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLKKCPHSTPLWLLLSRLEE 754
Query: 1047 RRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILW 1106
+ L +AR++LEK RL+NP LWL ++R+E RAGLK+IA+T+MAKALQECPN+G+LW
Sbjct: 755 KVGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIASTLMAKALQECPNSGVLW 814
Query: 1107 AEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTK 1166
+EAIFLE RPQRKTKSVDALKKCEHDPHVLLAV+KLFW
Sbjct: 815 SEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFW---------------------- 852
Query: 1167 SVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIING 1226
E K K REWF+RTVKID DLGDAWA+FYKFE+ +G
Sbjct: 853 -----------------------SERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHG 889
Query: 1227 TEETQAEVKKRCLAAEPKHGENWCRVAKNVSNWKLPRETILSLVA 1271
TEE + EV++RC AEP+HGE WC +K+++NW+ IL LVA
Sbjct: 890 TEEQREEVRRRCENAEPRHGELWCATSKDIANWQRKIGEILVLVA 934
Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 122/154 (79%), Gaps = 6/154 (3%)
Query: 61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEEEDD 120
K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND DDRHA P KR D+ +
Sbjct: 4 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKS 63
Query: 121 E------EDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYREKR 174
+ EDLND+N+DEFNGY GSLF+ PY+KDDEEAD IY +DKRMDE+RK+ RE+R
Sbjct: 64 QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 123
Query: 175 LREELERYRQERPKIQQQFSDLKRGLVTVSMDEW 208
+EE+E+YR ERPKIQQQFSDLKR L V+ +EW
Sbjct: 124 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEW 157
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 41/53 (77%)
Query: 24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS P ++A
Sbjct: 262 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 314
>sp|Q5RCC2|PRP6_PONAB Pre-mRNA-processing factor 6 OS=Pongo abelii GN=PRPF6 PE=2 SV=1
Length = 941
Score = 1222 bits (3162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/1065 (60%), Positives = 774/1065 (72%), Gaps = 151/1065 (14%)
Query: 227 VNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEE 286
+N+ KK F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND DDRHA P KR D+
Sbjct: 1 MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM 60
Query: 287 EDDE------EDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYR 340
+ ++ EDLND+N+DEFNGY GSLF+ PY+KDDEEAD IY +DKRMDE+RK+ R
Sbjct: 61 KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR 120
Query: 341 EKRLREELERYRQERPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFT 400
E+R +EE+E+YR ERPKIQQQFSDLKR L V+ +EW ++PEVGDARN++QRNPR EK T
Sbjct: 121 EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT 180
Query: 401 PLPDSVLRGNL-GGESTGAIDPN------------SGLMSQIPGTATPGMLTP-SGDLDL 446
P+PDS +L GE+ ++DP GL + PG TPG++TP +G+LD+
Sbjct: 181 PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM 240
Query: 447 RKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKS 506
RK+GQARNTLM+++L+Q+SDSV GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS
Sbjct: 241 RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS 300
Query: 507 VRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARA 566
VRETNP+HPPAWIASARLEEVTGK+Q ARNLIMKG E SED+WLEAARLQP DTA+A
Sbjct: 301 VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA 360
Query: 567 VIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDAR 626
V+AQAVRH+P VRI+I+AA+LET+ +AK+RV RKALEH+PNSVRLWKAAVELE+PEDAR
Sbjct: 361 VVAQAVRHLPQFVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR 420
Query: 627 ILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNN 686
I+LSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDR IW TAAKLEEA+GN
Sbjct: 421 IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT 480
Query: 687 AMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRK 746
MV+KIIDRA++SL ANGVEINRE W ++A E ++AGSV TCQA++RA+IG G+E+EDRK
Sbjct: 481 QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK 540
Query: 747 HTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKA 806
HTWMEDA+SC A ECA RA Y
Sbjct: 541 HTWMEDADSCVAHNALECA-------------------RAIY------------------ 563
Query: 807 VAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMG 866
+ + +KKS+WLRAAYF KNHGTRESLE LLQ+AVAHCPK+EVL
Sbjct: 564 ---------AYALQVFPSKKSVWLRAAYFGKNHGTRESLEALLQRAVAHCPKAEVL---- 610
Query: 867 AKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGA 926
WL G ++ WL + AR +LA A
Sbjct: 611 ----WLMG------------------AKSKWL--------TGDVPAARSILALA------ 634
Query: 927 FQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERA 986
FQANPNSEEIWLAAVKLESEN+EYERARRLLAKAR+SAPT RV ++S KLEW DN+ A
Sbjct: 635 FQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAA 694
Query: 987 LQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEE 1046
L +EA++ + DF KLWMMKGQIEEQK +++KA + ++Q +KKCPHS PLW++L+ LEE
Sbjct: 695 QDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEE 754
Query: 1047 RRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILW 1106
+ L + R++LEK RL+NP LWL ++R+E RAGLK+IANT+MAKALQECPN+GILW
Sbjct: 755 KIGQLTRTRAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814
Query: 1107 AEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTK 1166
+EAIFLE RPQR+TKSVDALKKCEHDPHVLLAV+KLFW
Sbjct: 815 SEAIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFW---------------------- 852
Query: 1167 SVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIING 1226
+ K K REWF+RTVKID DLGDAWA+FYKFE+ +G
Sbjct: 853 -----------------------SQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHG 889
Query: 1227 TEETQAEVKKRCLAAEPKHGENWCRVAKNVSNWKLPRETILSLVA 1271
TEE Q EV+KRC +AEP+HGE WC V+++++NW+ IL LVA
Sbjct: 890 TEERQEEVRKRCESAEPRHGELWCAVSEDIANWQKKIGDILRLVA 934
Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 123/154 (79%), Gaps = 6/154 (3%)
Query: 61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEEEDD 120
K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND DDRHA P KR D+ + +
Sbjct: 4 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKN 63
Query: 121 E------EDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYREKR 174
+ EDLND+N+DEFNGY GSLF+ PY+KDDEEAD IY +DKRMDE+RK+ RE+R
Sbjct: 64 QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 123
Query: 175 LREELERYRQERPKIQQQFSDLKRGLVTVSMDEW 208
+EE+E+YR ERPKIQQQFSDLKR L V+ +EW
Sbjct: 124 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEW 157
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 41/53 (77%)
Query: 24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS P ++A
Sbjct: 262 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 314
>sp|Q12381|PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp1 PE=1 SV=1
Length = 906
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/1039 (40%), Positives = 597/1039 (57%), Gaps = 153/1039 (14%)
Query: 234 FMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEEEDDEEDL 293
F+ + P YVAG+GRGATGFTTRSD+GPA++ + A ++ + +EEED +
Sbjct: 8 FLNMQPPPNYVAGLGRGATGFTTRSDLGPAQELPSQESIKAAIEQRKSEIEEEEDIDPRY 67
Query: 294 NDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYREKRLREELERYRQ 353
D + + +LF PYD +DEEAD IY+ +++ + ++RK REK+ + + E+Y +
Sbjct: 68 QDPDNE------VALFATAPYDHEDEEADKIYQSVEEHLSKRRKSQREKQEQLQKEKYEK 121
Query: 354 ERPKIQQQFSDLKRGLVTVSMDEWKNVPEVGD-ARNRKQRNPRAEKFTPLPDSVL---RG 409
E PK+ QF+DLKRGL T++ ++W N+PE GD R ++ + PR E+F D VL R
Sbjct: 122 ENPKVSSQFADLKRGLSTLTDEDWNNIPEPGDLTRKKRTKQPRRERFYATSDFVLASARN 181
Query: 410 NLGGESTGAIDPNSGLMSQIPGTATPGMLTPSGDLDLRKMGQARNTLMNVKLNQISDSVV 469
S A+D +G T TP M + ++G AR+ ++ +KL Q S ++
Sbjct: 182 ENQAISNFAVDTQAG-------TETPDM--NGTKTNFVEIGAARDKVLGIKLAQASSNLT 232
Query: 470 GQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTG 529
+ +DPKGYLT L SM+P D+ DI+KAR LL+SV ETNP H W+A+ARLEEV
Sbjct: 233 SPSTIDPKGYLTSLNSMVPKNANDLGDIRKARKLLQSVIETNPKHASGWVAAARLEEVAN 292
Query: 530 KVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLE 589
K+ A++LI+KGCE SED+WLEA RL P A+ +IA AV+ +P SV +W++A LE
Sbjct: 293 KLSQAQSLILKGCENCSRSEDVWLEAIRLHPAAEAKVIIANAVKKLPKSVTLWLEAEKLE 352
Query: 590 TETKAKRRVYRKALEHIPNSVRLWKAAVELEDPED-ARILLSRAVECCPTSVELWLALAR 648
+ + K+R+ +KALE P SV LWK AV LE+ D ARILL+RAVE P S++LWLALAR
Sbjct: 353 NQAQHKKRIIKKALEFNPTSVSLWKEAVNLEEEVDNARILLARAVELIPMSIDLWLALAR 412
Query: 649 LETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEIN 708
LETYENA+KVLNKAR+ I T ++W AA+LEE GN + V+KI+ R +S L A G +
Sbjct: 413 LETYENAKKVLNKARQTIRTSHEVWIAAARLEEQQGNVSRVEKIMARGVSELQATGGMLQ 472
Query: 709 REHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAI 768
R+ W EA + E G+V T QA+I +G G+++ED+ TW++DA+S + +CARA+
Sbjct: 473 RDQWLSEAEKCETEGAVITAQAIINTCLGVGLDEEDQFDTWLDDAQSFIARKCIDCARAV 532
Query: 769 YAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSI 828
+A +L +P + +WLRA EK +GT ES+ ++L+KAV CPK+E+LWL+ AK K
Sbjct: 533 FAFSLRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAVESCPKAEILWLLYAKERKN-- 590
Query: 829 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ 888
D+ AR IL AF+
Sbjct: 591 --------------------------------------------VNDIAGARNILGRAFE 606
Query: 889 ANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENN 948
N NSEEIWLAAV++E NNE ERAR+LLA+AR ++G +E IW ++ LE
Sbjct: 607 YNSNSEEIWLAAVRIEFVNNENERARKLLARARIESG-------TERIWTKSISLER--- 656
Query: 949 EYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKG 1008
LD +RALQLL+ A+K++P + KL+MMKG
Sbjct: 657 ------------------------------ILDEKDRALQLLENALKIYPHYDKLYMMKG 686
Query: 1009 QIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNC 1068
QI E K ++ A D + K CP+S+PLW++LA LEE++ + I+AR V ++ +++NP
Sbjct: 687 QIFEDKEQIELARDAYLAGTKVCPYSIPLWLLLAKLEEKQSV-IRARVVFDRAKVKNPKN 745
Query: 1069 AELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALKK 1128
LWL I++E+RAG +AKALQECP++G+LW EAI+LEPR QRKT++ DAL+K
Sbjct: 746 EFLWLELIKMELRAGNISQVRAALAKALQECPSSGLLWTEAIWLEPRAQRKTRATDALRK 805
Query: 1129 CEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKLF 1188
CE + H+L ++++ W E
Sbjct: 806 CEGNAHLLCTIARMLWLE------------------------------------------ 823
Query: 1189 WCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAEPKHGEN 1248
K K R WF + VK D D GD W +FYK+ + G E+ Q EV A+P HG
Sbjct: 824 ---KKADKARSWFLKAVKADQDNGDVWCWFYKYSLEAGNEDQQKEVLTSFETADPHHGYF 880
Query: 1249 WCRVAKNVSNW-KLPRETI 1266
W + K++ N K P+E +
Sbjct: 881 WPSITKDIKNSRKTPQELL 899
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 94/146 (64%), Gaps = 6/146 (4%)
Query: 65 FMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEEEDDEEDL 124
F+ + P YVAG+GRGATGFTTRSD+GPA++ + A ++ + +EEED +
Sbjct: 8 FLNMQPPPNYVAGLGRGATGFTTRSDLGPAQELPSQESIKAAIEQRKSEIEEEEDIDPRY 67
Query: 125 NDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYREKRLREELERYRQ 184
D + + +LF PYD +DEEAD IY+ +++ + ++RK REK+ + + E+Y +
Sbjct: 68 QDPDNE------VALFATAPYDHEDEEADKIYQSVEEHLSKRRKSQREKQEQLQKEKYEK 121
Query: 185 ERPKIQQQFSDLKRGLVTVSMDEWKN 210
E PK+ QF+DLKRGL T++ ++W N
Sbjct: 122 ENPKVSSQFADLKRGLSTLTDEDWNN 147
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 16 KLKTQLAYVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYV 75
KL + + + +DPKGYLT L SM+P D+ DI+KAR LL+S G+V
Sbjct: 223 KLAQASSNLTSPSTIDPKGYLTSLNSMVPKNANDLGDIRKARKLLQSVIETNPKHASGWV 282
Query: 76 AG 77
A
Sbjct: 283 AA 284
>sp|P19735|PRP6_YEAST Pre-mRNA-splicing factor 6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PRP6 PE=1 SV=1
Length = 899
Score = 291 bits (744), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 275/1070 (25%), Positives = 448/1070 (41%), Gaps = 212/1070 (19%)
Query: 234 FMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEEEDDEEDL 293
F+ P GYV G+GRGATGF+T+ + VS+D + ++ + E+L
Sbjct: 6 FLDQEPPAGYVPGIGRGATGFSTK-------EKQVVSNDDKGRRIPKRYR-------ENL 51
Query: 294 NDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYREKRLREELERYRQ 353
N+ P D +D+EA +++ ++ ++ +K+K KR E+ +
Sbjct: 52 NNH------------LQSQPKDDEDDEAANVFKTLELKLAQKKK----KRANEKDDDNSV 95
Query: 354 ERPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFTPLPDSVLRGNLGG 413
+ +++QF+DLK L V+ EW ++P+ D R +RN E+
Sbjct: 96 DSSNVKRQFADLKESLAAVTESEWMDIPDATDFTRRNKRNRIQEQLNR------------ 143
Query: 414 ESTGAIDPNSGLMSQIPGTATPGMLTPSGDLDLRKMGQARNTLMNVKLN----QISDSVV 469
A P L P G++DL K+ + R L+ +++ Q++ +
Sbjct: 144 ----------------KTYAAPDSLIP-GNVDLNKLTEEREKLLQSQIDENLAQLTKNAS 186
Query: 470 GQTVV-------DPKGYLTDLQS--MIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIA 520
V D YL DL++ + + D++K R +LKS R+ +P +P WIA
Sbjct: 187 NPIQVNKPNAATDALSYLKDLENDRVNSLSDATLEDLQKMRTILKSYRKADPTNPQGWIA 246
Query: 521 SARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDT--ARAVIAQAVRHIPTS 578
SARLEE K A+ +I GC+E S D+WLE RL D + ++A A+ PTS
Sbjct: 247 SARLEEKARKFSVAKKIIENGCQECPRSSDIWLENIRLHESDVHYCKTLVATAINFNPTS 306
Query: 579 VRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELE-DPEDARILLSRAVECCP 637
+W KA DLE+ T K RV RKAL+ IP LWK AV E D +L +A + P
Sbjct: 307 PLLWFKAIDLESTTVNKYRVVRKALQEIPRDEGLWKLAVSFEADKAQVIKMLEKATQFIP 366
Query: 638 TSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIID--- 694
S++L A L++Y NA+ LN R+ +P + +IW + LEE + + VDK++
Sbjct: 367 QSMDLLTAYTNLQSYHNAKMTLNSFRKILPQEPEIWIISTLLEERNNPDIPVDKLVSLLK 426
Query: 695 RALSSLSANGVEINREHWFKEAIEAEKA-GSVHTCQALIRAIIGYGVEQEDRKHTWMEDA 753
L LS NG + W K A A S TCQA++ AI+ W+ ++
Sbjct: 427 EGLLELSKNGYKATLSAWLKRAEALNDAPNSNLTCQAIVYAIL-----------EWLRES 475
Query: 754 ESCANQGAYECARAIYAQALATFP-SKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPK 812
G YE Q L P SK I +L+K + P
Sbjct: 476 ------GEYESELNNVDQILEKMPHSKVQI------------------AVLKKLIQWDPC 511
Query: 813 SEVLWL---MGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKS 869
VLW M +S K L A + E T+ S + KS L +M
Sbjct: 512 DTVLWSRLKMATESYHKIEELLAFFQELLFQTKNSDDI----RANMREKSPGLLMMYVSE 567
Query: 870 KWLA--GDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAF 927
W A GD ++ P++ ++ +KL + + + R + + F
Sbjct: 568 YWKAQKGDTRQTLVLIDQIIDFAPHNLDLRFFKIKLLGRSLQLDELRDFFQQTFSSLEDF 627
Query: 928 QANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERAL 987
+ + T R+ + D E A+
Sbjct: 628 KI----------------------------------SGTERLYYKYVNFLRYQDLNEEAI 653
Query: 988 QLLDE-AIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEE 1046
+ L+E +K FP K ++ GQI ++ + +T+ + P+ LW+ L+ ++E
Sbjct: 654 KFLNERCLKSFPICHKFFLQLGQIYHSMGNIEMSRETYLSGTRLVPNCPLLWVSLSKIDE 713
Query: 1047 -RRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGIL 1105
K ++ARS+L++G L+NP+ ++A I++EIR G D A ++ +ALQ+ P+ +L
Sbjct: 714 IDLKNPVRARSILDRGLLKNPDDVLFYIAKIQMEIRLGNLDQAELLVTQALQKFPSNALL 773
Query: 1106 WAEAIFL----EPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCM 1161
W E I L +KT DAL++ ++D VLL + F+ E + +
Sbjct: 774 WVEQIKLFKHGNKSSLKKTIFQDALRRTQNDHRVLLEIGVSFYAEAQYE----------- 822
Query: 1162 GVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKF 1221
+ L W E +KC + GD W + ++
Sbjct: 823 -----------------------TSLKWLERALKKCSRY-----------GDTWVWLFRT 848
Query: 1222 EIINGTEETQAEVKKRCLAAEPKHGENWCRVAKNVS-NWKLPRETILSLV 1270
G + ++ EP +G W +KNV + PRE +L L+
Sbjct: 849 YARLGKD--TVDLYNMFDQCEPTYGPEWIAASKNVKMQYCTPREILLRLM 896
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 30/144 (20%)
Query: 65 FMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKDEEEDDEEDL 124
F+ P GYV G+GRGATGF+T ++ VS+D + ++ + E+L
Sbjct: 6 FLDQEPPAGYVPGIGRGATGFST-------KEKQVVSNDDKGRRIPKRYR-------ENL 51
Query: 125 NDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYREKRLREELERYRQ 184
N+ P D +D+EA +++ ++ ++ +K+K KR E+ +
Sbjct: 52 NNH------------LQSQPKDDEDDEAANVFKTLELKLAQKKK----KRANEKDDDNSV 95
Query: 185 ERPKIQQQFSDLKRGLVTVSMDEW 208
+ +++QF+DLK L V+ EW
Sbjct: 96 DSSNVKRQFADLKESLAAVTESEW 119
>sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis
GN=CLF1 PE=3 SV=1
Length = 677
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 137/541 (25%), Positives = 216/541 (39%), Gaps = 87/541 (16%)
Query: 572 VRHIPTSVRIWIKAADLETETKAKRR---VYRKALEHIPNSVRLWKAAVELE----DPED 624
VR S+ W++ A E E K RR V+ +AL+ P +V LW +E E +
Sbjct: 65 VRRNRISMNNWMRYAQWELEQKEFRRARSVFERALDVDPTAVVLWIRYIEAEMKTRNINH 124
Query: 625 ARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQI------------ 672
AR LL RAV +LW +E ++L NIP RQ+
Sbjct: 125 ARNLLDRAVTIYSRVDKLWYKYVYME------EMLG----NIPGTRQVFERWMSWEPDEG 174
Query: 673 -WTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQAL 731
W KLE+ + V I +R V ++W K A E+ G+ +
Sbjct: 175 AWGAYIKLEKRYNEFDRVRAIFERF------TVVHPEPKNWIKWARFEEEYGT----SDM 224
Query: 732 IRAIIGYGVEQ--EDR--KHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAA 787
+R + G +E ED + ++ A A +E ARAIY AL P KS+ L A
Sbjct: 225 VREVYGLAIETLGEDFMDEKLFIAYARYEAKLKEFERARAIYKYALDRLPRAKSVALHKA 284
Query: 788 Y--FEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKS--IWLRAAYFEKNHGTRE 843
Y FEK G RE +E ++ K V + K N K+ IW E++ G E
Sbjct: 285 YTTFEKQFGDREGVEDVI------LSKRRVQYEEQIKENPKNYDIWFDFVRLEESSGDVE 338
Query: 844 SLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIW--LAAV 901
+ + ++A+A P S+ K W R I F A +W L A
Sbjct: 339 RVRDVYERAIAQMPPSQ------EKRHW-------RRYIYLWIFYA------LWEELEAK 379
Query: 902 KLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKAR 961
+E + Y+ RL+ + +IWL + E + + AR+ L A
Sbjct: 380 DMERAHQIYQECIRLIPHKKFTFA---------KIWLMKAQFEIRQMDLQAARKTLGHAI 430
Query: 962 ASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAH 1021
+ P ++ LE L R +L ++ I+ P + W+ ++E + +D+A
Sbjct: 431 GACPKDKLFKGYIDLERQLFEFVRCRKLFEKQIEWSPSNCQAWIKFAELERGLDDIDRAR 490
Query: 1022 DTFSQAIKKCPHSVP--LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVE 1079
+ I + +P LW + EE + R++ E+ L N ++W+ R E
Sbjct: 491 AIYELGISQPVLDMPELLWKSYIDFEEYEGEYDRTRALYERL-LEKTNHVKVWINFARFE 549
Query: 1080 I 1080
I
Sbjct: 550 I 550
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 146/379 (38%), Gaps = 70/379 (18%)
Query: 783 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTR 842
W+R A +E ++ ++A+ P + VLW+ ++ K+ + NH
Sbjct: 75 WMRYAQWELEQKEFRRARSVFERALDVDPTAVVLWIRYIEAEMKTRNI-------NHAR- 126
Query: 843 ESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVK 902
LL +AV + + LW + + G++P R + P+ E W A +K
Sbjct: 127 ----NLLDRAVTIYSRVDKLWYKYVYMEEMLGNIPGTRQVFERWMSWEPD-EGAWGAYIK 181
Query: 903 LESENNEYERARRLL----------------AKARAQAGA--------------FQANPN 932
LE NE++R R + A+ + G +
Sbjct: 182 LEKRYNEFDRVRAIFERFTVVHPEPKNWIKWARFEEEYGTSDMVREVYGLAIETLGEDFM 241
Query: 933 SEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMI----------QSAKLEWCLDN 982
E++++A + E++ E+ERAR + A P + + Q E D
Sbjct: 242 DEKLFIAYARYEAKLKEFERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDV 301
Query: 983 L--ERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHS------ 1034
+ +R +Q +E IK P +W ++EE +++ D + +AI + P S
Sbjct: 302 ILSKRRVQY-EEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHW 360
Query: 1035 ---VPLWIMLANLEE-RRKMLIKARSVLEKGRLRNPN----CAELWLAAIRVEIRAGLKD 1086
+ LWI A EE K + +A + ++ P+ A++WL + EIR
Sbjct: 361 RRYIYLWIFYALWEELEAKDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQ 420
Query: 1087 IANTMMAKALQECPNAGIL 1105
A + A+ CP +
Sbjct: 421 AARKTLGHAIGACPKDKLF 439
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 95/493 (19%), Positives = 180/493 (36%), Gaps = 123/493 (24%)
Query: 496 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEA 555
+ ++AR + + + +P WI E T + ARNL+ + + LW +
Sbjct: 87 EFRRARSVFERALDVDPTAVVLWIRYIEAEMKTRNINHARNLLDRAVTIYSRVDKLWYKY 146
Query: 556 ARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKA 615
++ + + +IP + R+V+ + + P+ W A
Sbjct: 147 VYME----------EMLGNIPGT-----------------RQVFERWMSWEPDEG-AWGA 178
Query: 616 AVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTT 675
++LE R ++ R + + P + W
Sbjct: 179 YIKLE--------------------------KRYNEFDRVRAIFERFTVVHPEPKN-WIK 211
Query: 676 AAKLEEAHGNNAMVDKIIDRALSSLSANGVE----INREHWFKEAIEAEKAGSVHTCQAL 731
A+ EE +G + MV ++ A+ +L + ++ I + + E E+A
Sbjct: 212 WARFEEEYGTSDMVREVYGLAIETLGEDFMDEKLFIAYARYEAKLKEFERA--------- 262
Query: 732 IRAIIGYGVEQEDRKHTWMEDAESCANQGAYECA------------------RAIYAQAL 773
RAI Y +++ R A+S A AY R Y + +
Sbjct: 263 -RAIYKYALDRLPR-------AKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQI 314
Query: 774 ATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAA 833
P IW E++ G E + + ++A+A P S+ +K W R
Sbjct: 315 KENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQ----------EKRHWRRYI 364
Query: 834 YFEKNHGTRESLET--------LLQKAVAHCPKSEV----LWLMGAKSKWLAGDVPAARG 881
Y + E LE + Q+ + P + +WLM A+ + D+ AAR
Sbjct: 365 YLWIFYALWEELEAKDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQAARK 424
Query: 882 ILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAV 941
L A A P ++++ + LE + E+ R R+L K + +P++ + W+
Sbjct: 425 TLGHAIGACPK-DKLFKGYIDLERQLFEFVRCRKLFEK------QIEWSPSNCQAWIKFA 477
Query: 942 KLESENNEYERAR 954
+LE ++ +RAR
Sbjct: 478 ELERGLDDIDRAR 490
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 32/270 (11%)
Query: 470 GQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTG 529
++V K Y T + G + + K R+ + + NP + W RLEE +G
Sbjct: 276 AKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQIKENPKNYDIWFDFVRLEESSG 335
Query: 530 KVQAARNLIMKGCEENQTSED---------LWLEAA---RLQPVDTARA--VIAQAVRHI 575
V+ R++ + + S++ LW+ A L+ D RA + + +R I
Sbjct: 336 DVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEAKDMERAHQIYQECIRLI 395
Query: 576 P----TSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPED 624
P T +IW+ A E + +A R+ A+ P +L+K ++LE +
Sbjct: 396 PHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKD-KLFKGYIDLERQLFEFVR 454
Query: 625 ARILLSRAVECCPTSVELWLALARLET----YENARKV--LNKARENIPTDRQIWTTAAK 678
R L + +E P++ + W+ A LE + AR + L ++ + +W +
Sbjct: 455 CRKLFEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYELGISQPVLDMPELLWKSYID 514
Query: 679 LEEAHGNNAMVDKIIDRALSSLSANGVEIN 708
EE G + +R L + V IN
Sbjct: 515 FEEYEGEYDRTRALYERLLEKTNHVKVWIN 544
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 13/155 (8%)
Query: 959 KARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLD 1018
+ + AP P+ + L +D E ALQ + F D +L +G
Sbjct: 9 RVKNKAPAPQQISAEQLLREAVDRQEPALQA---PTQRFADLEELHEYQG---------- 55
Query: 1019 KAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRV 1078
+ F +++ S+ W+ A E +K +ARSV E+ +P LW+ I
Sbjct: 56 RKRKEFEDYVRRNRISMNNWMRYAQWELEQKEFRRARSVFERALDVDPTAVVLWIRYIEA 115
Query: 1079 EIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
E++ + A ++ +A+ LW + +++E
Sbjct: 116 EMKTRNINHARNLLDRAVTIYSRVDKLWYKYVYME 150
>sp|Q54VF4|Y8236_DICDI TPR-containing protein DDB_G0280363 OS=Dictyostelium discoideum
GN=DDB_G0280363 PE=4 SV=2
Length = 1304
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/522 (21%), Positives = 221/522 (42%), Gaps = 79/522 (15%)
Query: 748 TWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAV 807
++E A+ Q + AR Y + +T P WL A E+++G E + +LQ +
Sbjct: 771 VYLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYGRLEKCQKILQLGL 830
Query: 808 AHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGA 867
HCP +E L + G + +K + G R L L +++ K+ + G
Sbjct: 831 KHCPFNESLLIKGIRHEEK--------MDNLEGARALLSQLRDQSIY---KTWRAVMEGG 879
Query: 868 KSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAF 927
+ AG++ AR I + P I+ A KLE EYERA ++ K G F
Sbjct: 880 LLEARAGNIDVARKIFKYLMKHVPWYGPIYQEAYKLEERCEEYERAINIVEK-----GLF 934
Query: 928 QANPNSEEIWLAAVK---------LESENNEYERARRLLAKARASAPTPRVMIQSAKLEW 978
+ +P +W +A++ L+S N ERAR+ +++ T ++ ++A++E
Sbjct: 935 E-DPKYGPLWFSALRLYEKTSHGFLQSTRNTVERARQAVSR----EVTWKIYFEAAQIEE 989
Query: 979 CLDNLERALQLLDEAIKVFPD--FAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP 1036
NL + +++++ P+ K+W+ + E + + A +A+++ P +
Sbjct: 990 RSKNLTLSRAAYVKSVELCPENLLWKVWLGGSRTELNADNICIARKLVFRALEEVPSKLR 1049
Query: 1037 LWIML--ANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAK 1094
++L + LEE + K+R +L+ + +++L ++ +E+RA + A +
Sbjct: 1050 SLVLLEYSRLEEYAGNINKSRRILKMAHVEARLDWKVFLESVLLEMRANNYEAAIKEAKE 1109
Query: 1095 ALQECPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHR 1154
+L+ AG LWA I L K++ ++ KK + S WCE
Sbjct: 1110 SLKIHSGAGRLWAALIQLNQLKGVKSQ-LNVFKKALQ----FVPKSGEVWCE-------- 1156
Query: 1155 SGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDA 1214
G+R + N+ ++ R + ++ P GD+
Sbjct: 1157 -GARIALN----------------------------NNELREARRFLEFAIQFTPQFGDS 1187
Query: 1215 WAYFYKFEII-NGTEETQAEVKKRCLAAEPKHGENW--CRVA 1253
+ + EI+ G +++++ C+ A+P +G W C V
Sbjct: 1188 FIELLRLEIMEKGPNCDISKLEQLCINADPNYGFMWLHCTVC 1229
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/462 (20%), Positives = 187/462 (40%), Gaps = 61/462 (13%)
Query: 495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
N++K AR + V T P W+ A++EE G+++ + ++ G + +E L ++
Sbjct: 783 NNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYGRLEKCQKILQLGLKHCPFNESLLIK 842
Query: 555 AAR----LQPVDTARAVIAQAV-RHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHI 606
R + ++ ARA+++Q + I + R ++ LE R++++ ++H+
Sbjct: 843 GIRHEEKMDNLEGARALLSQLRDQSIYKTWRAVMEGGLLEARAGNIDVARKIFKYLMKHV 902
Query: 607 PNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENI 666
P +++ A +LE+ R E YE A ++ K
Sbjct: 903 PWYGPIYQEAYKLEE--------------------------RCEEYERAINIVEKGLFED 936
Query: 667 PTDRQIWTTAAKLEE--AHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGS 724
P +W +A +L E +HG ++RA ++S E+ + +F+ A E++ +
Sbjct: 937 PKYGPLWFSALRLYEKTSHGFLQSTRNTVERARQAVSR---EVTWKIYFEAAQIEERSKN 993
Query: 725 VHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSK--KSI 782
+ +A + E K W+ + + N AR + +AL PSK +
Sbjct: 994 LTLSRAAYVKSVELCPENLLWK-VWLGGSRTELNADNICIARKLVFRALEEVPSKLRSLV 1052
Query: 783 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTR 842
L + E+ G +L+ +AH ++ + W ++L + E
Sbjct: 1053 LLEYSRLEEYAGNINKSRRILK--MAHV-EARLDW---------KVFLESVLLEMRANNY 1100
Query: 843 ESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVK 902
E+ ++++ + LW + L G V + + A Q P S E+W +
Sbjct: 1101 EAAIKEAKESLKIHSGAGRLWAALIQLNQLKG-VKSQLNVFKKALQFVPKSGEVWCEGAR 1159
Query: 903 LESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLE 944
+ NNE ARR L A Q P + ++ ++LE
Sbjct: 1160 IALNNNELREARRFL------EFAIQFTPQFGDSFIELLRLE 1195
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 968 RVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQA 1027
RV ++ A L +NL+ A + + P ++ W+ ++EE L+K
Sbjct: 770 RVYLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYGRLEKCQKILQLG 829
Query: 1028 IKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIR---VEIRAGL 1084
+K CP + L I EE+ L AR++L + LR+ + + W A + +E RAG
Sbjct: 830 LKHCPFNESLLIKGIRHEEKMDNLEGARALLSQ--LRDQSIYKTWRAVMEGGLLEARAGN 887
Query: 1085 KDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALKK 1128
D+A + ++ P G ++ EA LE R + ++++ ++K
Sbjct: 888 IDVARKIFKYLMKHVPWYGPIYQEAYKLEERCEEYERAINIVEK 931
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 175/465 (37%), Gaps = 91/465 (19%)
Query: 561 VDTARAVIAQAVRHIPTSV--RIWIKAADL---ETETKAKRRVYRKALEHIPNSVRLWKA 615
++ A Q++ +P V R++++ ADL + K R+ YRK P + W
Sbjct: 749 LEIAMEFAFQSLSVLPEKVHWRVYLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLE 808
Query: 616 AVELEDP----EDARILLSRAVECCPTSVELWLALAR----LETYENARKVLNKARENIP 667
++E+ E + +L ++ CP + L + R ++ E AR +L++ R
Sbjct: 809 YAKMEEDYGRLEKCQKILQLGLKHCPFNESLLIKGIRHEEKMDNLEGARALLSQLR---- 864
Query: 668 TDRQIWTT------AAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEK 721
D+ I+ T LE GN + KI + + G + +E E E
Sbjct: 865 -DQSIYKTWRAVMEGGLLEARAGNIDVARKIFKYLMKHVPWYGPIYQEAYKLEERCE-EY 922
Query: 722 AGSVHTCQALIRAIIGYGVE-------QEDRKHTWMEDAESCANQGAYECAR----AIYA 770
+++ + + YG E H +++ + + +R IY
Sbjct: 923 ERAINIVEKGLFEDPKYGPLWFSALRLYEKTSHGFLQSTRNTVERARQAVSREVTWKIYF 982
Query: 771 QALATFPSKKSIWL-RAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIW 829
+A K++ L RAAY K+V CP++ +LW +W
Sbjct: 983 EAAQIEERSKNLTLSRAAYV---------------KSVELCPEN-LLW---------KVW 1017
Query: 830 LRAAYFEKNHGTRESLETLLQKAVAHCPKS--EVLWLMGAKSKWLAGDVPAARGILSLAF 887
L + E N L+ +A+ P ++ L ++ + AG++ +R IL +A
Sbjct: 1018 LGGSRTELNADNICIARKLVFRALEEVPSKLRSLVLLEYSRLEEYAGNINKSRRILKMAH 1077
Query: 888 QANPNSEEIWLAAVKLESENNEYERA--------------RRL---------LAKARAQA 924
+++L +V LE N YE A RL L ++Q
Sbjct: 1078 VEARLDWKVFLESVLLEMRANNYEAAIKEAKESLKIHSGAGRLWAALIQLNQLKGVKSQL 1137
Query: 925 GAF----QANPNSEEIWLAAVKLESENNEYERARRLLAKARASAP 965
F Q P S E+W ++ NNE ARR L A P
Sbjct: 1138 NVFKKALQFVPKSGEVWCEGARIALNNNELREARRFLEFAIQFTP 1182
>sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=clf-1 PE=3 SV=1
Length = 695
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 127/526 (24%), Positives = 210/526 (39%), Gaps = 73/526 (13%)
Query: 582 WIKAADLETETKA---KRRVYRKALEHIPNSVRLWKAAVELE----DPEDARILLSRAVE 634
W++ A E E K R V+ +AL+ PN+ +LW V+ E + AR LL RAV
Sbjct: 75 WLQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYVQAEIKNRNINHARNLLDRAVT 134
Query: 635 CCPTSVELWL----ALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVD 690
P LW + L R+V ++ + P D Q W+ +LE+ +G
Sbjct: 135 RLPRVTSLWYQYLYVMEMLGDIPGTRQVFDRWMKWQP-DEQAWSAYIRLEKRYGE----- 188
Query: 691 KIIDRALSSLSA-NGVEINREHWFKEAIEAEKAGSVHTCQALIRAII-----GYGVEQED 744
DRA A V W K A E+ G+ T + + + I G + D
Sbjct: 189 --FDRAREIFRAFTAVHPEPRTWLKWAKFEEEYGTSDTVREVFQTAIQTIAETLGDDAVD 246
Query: 745 RKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAY--FEKNHGTRESLETL 802
+ ++ A A YE ARAIY L P KS+ L A Y FEK G +E +E +
Sbjct: 247 ER-IFIAFARYEARLREYERARAIYKFGLDNLPRSKSMTLHAHYTTFEKQFGDKEGVEDV 305
Query: 803 LQKAVAHCPKSEVLWLMGAKSNKKS--IWLRAAYFEKNHGTRESLETLLQKAVAHCPKSE 860
+ K L+ K N K+ +W A E++ G + + ++A+A P ++
Sbjct: 306 I------LTKRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQ 359
Query: 861 VLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKA 920
K W R I F A IW E E + RAR++
Sbjct: 360 ------EKRHW-------RRYIFLFLFYA------IWE-----ERETKDIGRARQIYD-- 393
Query: 921 RAQAGAFQANPNSE----EIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKL 976
P+ + ++W+A E + AR+ L +A P ++ + L
Sbjct: 394 ----TCLNLIPHKKFTFAKVWVAKAHFEIRQGQLTTARKTLGRAIGMCPKDKIFKEYILL 449
Query: 977 EWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP 1036
E L ER L ++ + P + W+ ++E + L++ F A+ + +P
Sbjct: 450 EQKLYEFERCRTLYEKHVMYNPANCQTWIKWAELERGLDDLERTRAIFELAVSQPILDMP 509
Query: 1037 --LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEI 1080
+W + EE + R++ E+ L + ++W++ + EI
Sbjct: 510 EVVWKAYIDFEEEEGEYERTRALYERL-LEKADHPKVWISYAQFEI 554
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 151/394 (38%), Gaps = 73/394 (18%)
Query: 781 SIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHG 840
S WL+ A +E ++ ++A+ P + LW+ ++ K+ + NH
Sbjct: 73 SNWLQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYVQAEIKNRNI-------NHA 125
Query: 841 TRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAA 900
LL +AV P+ LW + GD+P R + + P+ E+ W A
Sbjct: 126 -----RNLLDRAVTRLPRVTSLWYQYLYVMEMLGDIPGTRQVFDRWMKWQPD-EQAWSAY 179
Query: 901 VKLESENNEYERARRLL----------------AKARAQAG-------AFQANPNS---- 933
++LE E++RAR + AK + G FQ +
Sbjct: 180 IRLEKRYGEFDRAREIFRAFTAVHPEPRTWLKWAKFEEEYGTSDTVREVFQTAIQTIAET 239
Query: 934 -------EEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDN---- 982
E I++A + E+ EYERAR + + P + M A
Sbjct: 240 LGDDAVDERIFIAFARYEARLREYERARAIYKFGLDNLPRSKSMTLHAHYTTFEKQFGDK 299
Query: 983 -------LERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHS- 1034
L + +L +E +K +W ++EE +D+ + + +AI + P +
Sbjct: 300 EGVEDVILTKRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQ 359
Query: 1035 --------VPLWIMLANLEERR-KMLIKARSVLEKGRLRNPN----CAELWLAAIRVEIR 1081
+ L++ A EER K + +AR + + P+ A++W+A EIR
Sbjct: 360 EKRHWRRYIFLFLFYAIWEERETKDIGRARQIYDTCLNLIPHKKFTFAKVWVAKAHFEIR 419
Query: 1082 AGLKDIANTMMAKALQECPNAGILWAEAIFLEPR 1115
G A + +A+ CP I E I LE +
Sbjct: 420 QGQLTTARKTLGRAIGMCPKDKIF-KEYILLEQK 452
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 178/490 (36%), Gaps = 101/490 (20%)
Query: 496 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEA 555
+ +AR + + + +PN+ WI + E + ARNL+ + LW +
Sbjct: 87 EFARARSVFERALDVHPNNTQLWIRYVQAEIKNRNINHARNLLDRAVTRLPRVTSLWYQY 146
Query: 556 --------------------ARLQP-----------------VDTARAVIAQAVRHIPTS 578
+ QP D AR + +A +
Sbjct: 147 LYVMEMLGDIPGTRQVFDRWMKWQPDEQAWSAYIRLEKRYGEFDRAREIF-RAFTAVHPE 205
Query: 579 VRIWIKAADLETE---TKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRAVEC 635
R W+K A E E + R V++ A++ I ++ +D D RI ++ A
Sbjct: 206 PRTWLKWAKFEEEYGTSDTVREVFQTAIQTIAETLG--------DDAVDERIFIAFA--- 254
Query: 636 CPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTA--AKLEEAHGNNAMVDKII 693
ARL YE AR + +N+P + + A E+ G+ V+ +I
Sbjct: 255 --------RYEARLREYERARAIYKFGLDNLPRSKSMTLHAHYTTFEKQFGDKEGVEDVI 306
Query: 694 DRALSSLSANGVEINREH---WFKEAIEAEKAGSV-HTCQALIRAIIGYGVEQEDRKHTW 749
L V+ N ++ WF A E G V T + RAI QE R W
Sbjct: 307 LTKRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQEKRH--W 364
Query: 750 MEDAESCANQGAYE--------CARAIYAQALATFPSKK----SIWLRAAYFEKNHGTRE 797
+E AR IY L P KK +W+ A+FE G
Sbjct: 365 RRYIFLFLFYAIWEERETKDIGRARQIYDTCLNLIPHKKFTFAKVWVAKAHFEIRQGQLT 424
Query: 798 SLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCP 857
+ L +A+ CPK ++ K+ I L +E E TL +K V + P
Sbjct: 425 TARKTLGRAIGMCPKDKIF--------KEYILLEQKLYEF-----ERCRTLYEKHVMYNP 471
Query: 858 KSEVLWLMGAKSKWLAGDVPAARGILSLAFQANP---NSEEIWLAAVKLESENNEYERAR 914
+ W+ A+ + D+ R I LA + P E +W A + E E EYER R
Sbjct: 472 ANCQTWIKWAELERGLDDLERTRAIFELAV-SQPILDMPEVVWKAYIDFEEEEGEYERTR 530
Query: 915 ----RLLAKA 920
RLL KA
Sbjct: 531 ALYERLLEKA 540
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 49/103 (47%)
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCA 1069
+EE K + F +++ + W+ A E +K +ARSV E+ +PN
Sbjct: 47 LEELKEYQGRKRKEFEDYVRRNRVRLSNWLQYAQWELEQKEFARARSVFERALDVHPNNT 106
Query: 1070 ELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFL 1112
+LW+ ++ EI+ + A ++ +A+ P LW + +++
Sbjct: 107 QLWIRYVQAEIKNRNINHARNLLDRAVTRLPRVTSLWYQYLYV 149
Score = 40.0 bits (92), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 123/326 (37%), Gaps = 68/326 (20%)
Query: 535 RNLIMKGCEENQTSEDLWLEAARLQP----VDTARAVIAQAVRHIPTSV--RIWIKAADL 588
R L + +EN + D+W + ARL+ VD R V +A+ +P + R W + L
Sbjct: 311 RRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQEKRHWRRYIFL 370
Query: 589 --------ETETK---AKRRVYRKALEHIPNS----VRLWKAAVELEDPE----DARILL 629
E ETK R++Y L IP+ ++W A E + AR L
Sbjct: 371 FLFYAIWEERETKDIGRARQIYDTCLNLIPHKKFTFAKVWVAKAHFEIRQGQLTTARKTL 430
Query: 630 SRAVECCPTSV---ELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNN 686
RA+ CP E L +L +E R + K P + Q W A+LE +
Sbjct: 431 GRAIGMCPKDKIFKEYILLEQKLYEFERCRTLYEKHVMYNPANCQTWIKWAELERGLDDL 490
Query: 687 AMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRK 746
I + A+S + E+ +K I+ E+ RA+ +E+ D
Sbjct: 491 ERTRAIFELAVSQPILDMPEVV----WKAYIDFEEEEG---EYERTRALYERLLEKADHP 543
Query: 747 HTWMEDAESCAN---------------------QGAYECARAIYAQALATFPSKK----- 780
W+ A+ N + A AR I+ +A + ++
Sbjct: 544 KVWISYAQFEINIPDEAEEEEETEEEVEEKPVSEEAKARARKIFERAHKSMKERELKAER 603
Query: 781 ----SIWLRAAYFEKNHGTRESLETL 802
+ WL FEK HG+ E +E +
Sbjct: 604 VSLLNAWLA---FEKTHGSAEDIEKI 626
>sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3
SV=1
Length = 676
Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 211/524 (40%), Gaps = 73/524 (13%)
Query: 582 WIKAADLETETKAKRR---VYRKALEHIPNSVRLWKAAVELE----DPEDARILLSRAVE 634
W++ A E E K RR ++ +AL+ P SV LW +E E + AR LL RAV
Sbjct: 75 WMRYASWELEQKEFRRARSIFERALDVNPTSVVLWIRYIESEMRNRNINHARNLLDRAVT 134
Query: 635 CCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVD 690
P + W +E + R+V + P D W+ KLE+ +
Sbjct: 135 ILPRVDKFWYKYVYMEETLGNIQGTRQVFERWMSWEP-DEGAWSAYIKLEKRYNEFERAR 193
Query: 691 KIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQ--EDR--K 746
I R V +W K A E+ G+ L+R + G +E ED +
Sbjct: 194 AIFQRF------TIVHPEPRNWIKWARFEEEYGT----SDLVREVYGMAIETLGEDFMDE 243
Query: 747 HTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAY--FEKNHGTRESLETLLQ 804
++ A+ A YE ARAIY AL P K++ L AY FEK G RE +E ++
Sbjct: 244 KLFIAYAKFEAKLKEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVI- 302
Query: 805 KAVAHCPKSEVLWLMGAKSNKKS--IWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVL 862
K V + K N ++ +W A E+ G + + + ++A+A P S+
Sbjct: 303 -----LSKRRVQYEEQLKENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQ-- 355
Query: 863 WLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARA 922
K W R I F A IW E E + +RAR++ +
Sbjct: 356 ----EKRHW-------RRYIYLWIFYA------IWE-----EMEAKDVDRARQIYTEC-- 391
Query: 923 QAGAFQANPNSE----EIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEW 978
+ P+ + +IWL + + + + AR+ L +A P ++ LE
Sbjct: 392 ----LKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARKTLGQAIGMCPKDKLFRGYIDLER 447
Query: 979 CLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP-- 1036
L R L ++ I+ P ++ W+ ++E + ++A F I + +P
Sbjct: 448 QLFEFVRCRTLYEKQIEWNPANSQSWIKYAELERGLDDSERARAIFELGIDQPMLDMPEL 507
Query: 1037 LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEI 1080
+W + EE + R + E+ L+ + ++W+ R EI
Sbjct: 508 VWKAYIDFEEYEGEYDRVRQLYERL-LQKTDHVKVWINYARFEI 550
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 122/576 (21%), Positives = 213/576 (36%), Gaps = 139/576 (24%)
Query: 496 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEA 555
+ ++AR + + + NP WI E + ARNL
Sbjct: 87 EFRRARSIFERALDVNPTSVVLWIRYIESEMRNRNINHARNL------------------ 128
Query: 556 ARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRL 612
+ +AV +P + W K +E + R+V+ + + P+
Sbjct: 129 ------------LDRAVTILPRVDKFWYKYVYMEETLGNIQGTRQVFERWMSWEPDEG-A 175
Query: 613 WKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQI 672
W A ++LE R +E AR + + P R
Sbjct: 176 WSAYIKLE--------------------------KRYNEFERARAIFQRFTIVHPEPRN- 208
Query: 673 WTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALI 732
W A+ EE +G + +V ++ A+ +L + ++
Sbjct: 209 WIKWARFEEEYGTSDLVREVYGMAIETLGEDFMD-------------------------E 243
Query: 733 RAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAY--FE 790
+ I Y A+ A YE ARAIY AL P K++ L AY FE
Sbjct: 244 KLFIAY--------------AKFEAKLKEYERARAIYKYALDRLPRSKAMALHKAYTTFE 289
Query: 791 KNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKS--IWLRAAYFEKNHGTRESLETL 848
K G RE +E ++ K V + K N ++ +W A E+ G + + +
Sbjct: 290 KQFGDREGVEDVI------LSKRRVQYEEQLKENPRNYDVWFDFARLEETSGDPDRVRDI 343
Query: 849 LQKAVAHCPKSE---------VLWLMGAKSKWL-AGDVPAARGILSLAFQANPNSE---- 894
++A+A P S+ LW+ A + + A DV AR I + + P+ +
Sbjct: 344 YERAIAQIPPSQEKRHWRRYIYLWIFYAIWEEMEAKDVDRARQIYTECLKLIPHKKFTFA 403
Query: 895 EIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERAR 954
+IWL + + + + AR+ L +A ++++ + LE + E+ R R
Sbjct: 404 KIWLLKAQFDIRQMDLQAARKTLGQAIGMCP-------KDKLFRGYIDLERQLFEFVRCR 456
Query: 955 RLLAKARASAP-TPRVMIQSAKLEWCLDNLERALQL----LDEAIKVFPDFAKLWMMKGQ 1009
L K P + I+ A+LE LD+ ERA + +D+ + P+ +W
Sbjct: 457 TLYEKQIEWNPANSQSWIKYAELERGLDDSERARAIFELGIDQPMLDMPEL--VWKAYID 514
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLE 1045
EE + D+ + + ++K H V +WI A E
Sbjct: 515 FEEYEGEYDRVRQLYERLLQKTDH-VKVWINYARFE 549
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 163/417 (39%), Gaps = 81/417 (19%)
Query: 747 HTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKA 806
+ WM A Q + AR+I+ +AL P+ +W+R E + LL +A
Sbjct: 73 NNWMRYASWELEQKEFRRARSIFERALDVNPTSVVLWIRYIESEMRNRNINHARNLLDRA 132
Query: 807 VAHCPKSEVLWL--------MGAKSNKKSIWLR-----------AAY--FEKNHGTRESL 845
V P+ + W +G + ++ R +AY EK + E
Sbjct: 133 VTILPRVDKFWYKYVYMEETLGNIQGTRQVFERWMSWEPDEGAWSAYIKLEKRYNEFERA 192
Query: 846 ETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQA---NPNSEEIWLAAVK 902
+ Q+ P+ W+ A+ + G R + +A + + E++++A K
Sbjct: 193 RAIFQRFTIVHPEPRN-WIKWARFEEEYGTSDLVREVYGMAIETLGEDFMDEKLFIAYAK 251
Query: 903 LESENNEYERARR-------------------------------------LLAKARAQA- 924
E++ EYERAR +L+K R Q
Sbjct: 252 FEAKLKEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILSKRRVQYE 311
Query: 925 GAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPR-----------VMIQS 973
+ NP + ++W +LE + + +R R + +A A P + + +
Sbjct: 312 EQLKENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQEKRHWRRYIYLWIFYA 371
Query: 974 AKLEWCLDNLERALQLLDEAIKVFPD----FAKLWMMKGQIEEQKNLLDKAHDTFSQAIK 1029
E +++RA Q+ E +K+ P FAK+W++K Q + ++ L A T QAI
Sbjct: 372 IWEEMEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARKTLGQAIG 431
Query: 1030 KCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKD 1086
CP L+ +LE + ++ R++ EK NP ++ W+ E+ GL D
Sbjct: 432 MCPKD-KLFRGYIDLERQLFEFVRCRTLYEKQIEWNPANSQSWIKY--AELERGLDD 485
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 118/285 (41%), Gaps = 20/285 (7%)
Query: 829 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ 888
W+R A +E ++ ++A+ P S VLW+ +S+ ++ AR +L A
Sbjct: 75 WMRYASWELEQKEFRRARSIFERALDVNPTSVVLWIRYIESEMRNRNINHARNLLDRAVT 134
Query: 889 ANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENN 948
P ++ W V +E + R++ + + + E W A +KLE N
Sbjct: 135 ILPRVDKFWYKYVYMEETLGNIQGTRQVFER-------WMSWEPDEGAWSAYIKLEKRYN 187
Query: 949 EYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVF-PDFA--KLWM 1005
E+ERAR + + P PR I+ A+ E + ++ AI+ DF KL++
Sbjct: 188 EFERARAIFQRFTIVHPEPRNWIKWARFEEEYGTSDLVREVYGMAIETLGEDFMDEKLFI 247
Query: 1006 MKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRK----------MLIKAR 1055
+ E + ++A + A+ + P S + + A ++ +L K R
Sbjct: 248 AYAKFEAKLKEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILSKRR 307
Query: 1056 SVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECP 1100
E+ NP ++W R+E +G D + +A+ + P
Sbjct: 308 VQYEEQLKENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIP 352
Score = 42.0 bits (97), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 13/155 (8%)
Query: 959 KARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLD 1018
+ + AP P + L +D E ALQ + F D +L +G
Sbjct: 9 RVKNKAPAPIQISAEQLLREAVDRQEPALQA---PTQRFADLEELHEYQG---------- 55
Query: 1019 KAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRV 1078
+ F +++ ++ W+ A+ E +K +ARS+ E+ NP LW+ I
Sbjct: 56 RKRKEFEDYVRRNRLNMNNWMRYASWELEQKEFRRARSIFERALDVNPTSVVLWIRYIES 115
Query: 1079 EIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
E+R + A ++ +A+ P W + +++E
Sbjct: 116 EMRNRNINHARNLLDRAVTILPRVDKFWYKYVYME 150
>sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1 PE=3
SV=2
Length = 673
Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 125/559 (22%), Positives = 225/559 (40%), Gaps = 115/559 (20%)
Query: 518 WIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEA----ARLQPVDTARAVIAQAVR 573
W+ A E + + AR++ + + + TS LW+ R + ++ AR ++ +AV
Sbjct: 75 WMRYAAWELEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAVT 134
Query: 574 HIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRAV 633
+P ++W K +E + L +IP + ++++ + E E A
Sbjct: 135 ILPRVDKLWYKYVYME-----------ETLGNIPGTRQVFERWMSWEPDEGA-------- 175
Query: 634 ECCPTSVELWLALARLET----YENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMV 689
W A +LE +E AR + + P R W A+ EE +G + +V
Sbjct: 176 ---------WSAYIKLEKRYNEFERARAIFQRFTIVHPEPRN-WIKWARFEEEYGTSDLV 225
Query: 690 DKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTW 749
++ A+ +L + ++ + I Y R T
Sbjct: 226 REVYGLAVETLGEDFMD-------------------------EKLFIAYA-----RFETK 255
Query: 750 MEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAY--FEKNHGTRESLETLLQKAV 807
+++ YE ARAIY AL P KSI L AY FEK G RE +E ++
Sbjct: 256 LKE---------YERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENVI---- 302
Query: 808 AHCPKSEVLWLMGAKSNKKS--IWLRAAYFEKNHGTRESLETLLQKAVAHCPKSE----- 860
K V + K N ++ +W A E+ G E + + ++A+A P S+
Sbjct: 303 --LAKRRVQYEEQLKENLRNYDVWFDFARLEEQSGDPERVRDVYERAIAQIPPSQEKRHW 360
Query: 861 ----VLWLMGAKSKWL-AGDVPAARGILSLAFQANPNSE----EIWLAAVKLESENNEYE 911
LW+ A + + A D+ AR + + + P+ + ++WL + E +
Sbjct: 361 RRYIYLWIFYALWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQ 420
Query: 912 RARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPT-PRVM 970
AR+ L +A ++++ + LE + E+ R R L K P+ +
Sbjct: 421 AARKTLGQAIGMCP-------KDKLFRGYIDLERQLFEFVRCRTLYEKQIEWNPSNSQSW 473
Query: 971 IQSAKLEWCLDNLERALQL----LDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQ 1026
IQ A+LE LD+ ERA + +D+ P+ +W E+ + ++ + +
Sbjct: 474 IQYAELERGLDDTERARAIYELGIDQPTLDMPEL--VWKAYIDFEDDEGEYERERQLYER 531
Query: 1027 AIKKCPHSVPLWIMLANLE 1045
++K H V +WI A E
Sbjct: 532 LLQKTDH-VKVWINYARFE 549
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 131/543 (24%), Positives = 212/543 (39%), Gaps = 91/543 (16%)
Query: 572 VRHIPTSVRIWIKAADLETETKAKRR---VYRKALEHIPNSVRLWKAAVELE----DPED 624
VR ++ W++ A E E K RR ++ +AL+ SV LW +E E +
Sbjct: 65 VRRNRINMNNWMRYAAWELEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINH 124
Query: 625 ARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQI------------ 672
AR LL RAV P +LW +E + NIP RQ+
Sbjct: 125 ARNLLDRAVTILPRVDKLWYKYVYME----------ETLGNIPGTRQVFERWMSWEPDEG 174
Query: 673 -WTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQAL 731
W+ KLE+ + I R V +W K A E+ G+ L
Sbjct: 175 AWSAYIKLEKRYNEFERARAIFQRF------TIVHPEPRNWIKWARFEEEYGT----SDL 224
Query: 732 IRAIIGYGVEQ--EDR--KHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAA 787
+R + G VE ED + ++ A YE ARAIY AL P KSI L A
Sbjct: 225 VREVYGLAVETLGEDFMDEKLFIAYARFETKLKEYERARAIYKYALDRLPRSKSITLHKA 284
Query: 788 Y--FEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKS--IWLRAAYFEKNHGTRE 843
Y FEK G RE +E ++ K V + K N ++ +W A E+ G E
Sbjct: 285 YTTFEKQFGDREGVENVI------LAKRRVQYEEQLKENLRNYDVWFDFARLEEQSGDPE 338
Query: 844 SLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKL 903
+ + ++A+A P S+ K W R I F A +W
Sbjct: 339 RVRDVYERAIAQIPPSQ------EKRHW-------RRYIYLWIFYA------LWE----- 374
Query: 904 ESENNEYERARRLLAKARAQAGAFQANPNSE----EIWLAAVKLESENNEYERARRLLAK 959
E E + +RAR++ + + P+ + ++WL + E + AR+ L +
Sbjct: 375 EMEAKDIDRARQVYTEC------LKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARKTLGQ 428
Query: 960 ARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDK 1019
A P ++ LE L R L ++ I+ P ++ W+ ++E + ++
Sbjct: 429 AIGMCPKDKLFRGYIDLERQLFEFVRCRTLYEKQIEWNPSNSQSWIQYAELERGLDDTER 488
Query: 1020 AHDTFSQAIKKCPHSVP--LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIR 1077
A + I + +P +W + E+ + R + E+ L+ + ++W+ R
Sbjct: 489 ARAIYELGIDQPTLDMPELVWKAYIDFEDDEGEYERERQLYERL-LQKTDHVKVWINYAR 547
Query: 1078 VEI 1080
EI
Sbjct: 548 FEI 550
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/441 (19%), Positives = 176/441 (39%), Gaps = 61/441 (13%)
Query: 829 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ 888
W+R A +E ++ ++A+ S LW+ +S+ ++ AR +L A
Sbjct: 75 WMRYAAWELEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAVT 134
Query: 889 ANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENN 948
P +++W V +E R++ + + + E W A +KLE N
Sbjct: 135 ILPRVDKLWYKYVYMEETLGNIPGTRQVFER-------WMSWEPDEGAWSAYIKLEKRYN 187
Query: 949 EYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVF-PDFA--KLWM 1005
E+ERAR + + P PR I+ A+ E + ++ A++ DF KL++
Sbjct: 188 EFERARAIFQRFTIVHPEPRNWIKWARFEEEYGTSDLVREVYGLAVETLGEDFMDEKLFI 247
Query: 1006 MKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRK----------MLIKAR 1055
+ E + ++A + A+ + P S + + A ++ +L K R
Sbjct: 248 AYARFETKLKEYERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENVILAKRR 307
Query: 1056 SVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAG---------ILW 1106
E+ N ++W R+E ++G + + +A+ + P + LW
Sbjct: 308 VQYEEQLKENLRNYDVWFDFARLEEQSGDPERVRDVYERAIAQIPPSQEKRHWRRYIYLW 367
Query: 1107 AEAIFLEPRPQRKTKSVDALKKCEHD-----PHVLLAVSKLFWCENKNQ--KCHRSGSRR 1159
IF + + K +D ++ + PH +K++ + + + + + +R+
Sbjct: 368 ---IFYALWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARK 424
Query: 1160 CMGVKTKSVDALKKCEHDPHVLLAVSKLF--WCENKNQ-----KCREWFNRTVKIDPDLG 1212
+G A+ C D KLF + + + Q +CR + + ++ +P
Sbjct: 425 TLG------QAIGMCPKD--------KLFRGYIDLERQLFEFVRCRTLYEKQIEWNPSNS 470
Query: 1213 DAWAYFYKFEI-INGTEETQA 1232
+W + + E ++ TE +A
Sbjct: 471 QSWIQYAELERGLDDTERARA 491
Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 986 ALQLLDEAI-KVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANL 1044
A QLL EA+ + P +EE + F +++ ++ W+ A
Sbjct: 22 AEQLLREAVDRQEPSLQAPTQRFADLEELHEYQGRKRKEFEDYVRRNRINMNNWMRYAAW 81
Query: 1045 EERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGI 1104
E +K +ARS+ E+ + LW+ I E+R + A ++ +A+ P
Sbjct: 82 ELEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAVTILPRVDK 141
Query: 1105 LWAEAIFLE 1113
LW + +++E
Sbjct: 142 LWYKYVYME 150
>sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1
Length = 691
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 112/518 (21%), Positives = 196/518 (37%), Gaps = 76/518 (14%)
Query: 524 LEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQ----PVDTARAVIAQAVRHIPTSV 579
LEE+ R C+ + + WL+ A+ + +R+V +A+ V
Sbjct: 47 LEELHEYQGRKRKEFESYCQRSGFNLKNWLQYAQWELEQKEYARSRSVFERALNLHANKV 106
Query: 580 RIWIKAADLETETK---AKRRVYRKALEHIPNSVRLWKAAVELEDP----EDARILLSRA 632
+WI+ + E +++ R + +A+ H+P +LW V +E+ R + R
Sbjct: 107 TLWIRYVEAELKSRNINFARNLLDRAVTHLPRVDKLWYKYVWVEEMLGNIPGVRQVFERW 166
Query: 633 VECCPTSVELWLALARLET----YENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAM 688
+E P W A +LE Y+ AR++ + P R W +K EE +G +
Sbjct: 167 MEWQPDEA-AWSAFIKLEQRYGEYDRAREIFTRFTMVHPEPRN-WIKWSKFEEEYGTSDR 224
Query: 689 VDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHT 748
V ++ +RA+ LS G E E F A +H RAI +G+E R
Sbjct: 225 VREVFERAIEELSKYGDEFVEERLF--IAYARYEAKLHDLDR-ARAIYKFGLENLPRSKA 281
Query: 749 WMEDAESCANQGAY-----------ECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRE 797
+ E + Y R Y + P +W A E+ G +
Sbjct: 282 MLLHKEYTTFEKQYGDREGVEDVVLSKRRRHYEDLVRENPKNYDVWFDYARLEEASGDID 341
Query: 798 SLETLLQKAVAHCPKSEV---------LWLMGA-------KSNKKS-------------- 827
+ +KA+A P ++ LW+ A K+ +++
Sbjct: 342 RTREVYEKAIAQVPPTQAKRHWRRYIYLWIFFALWEETEAKNPERARQVYDTCLKLIPHR 401
Query: 828 ------IWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVL--WLMGAKSKWLAGDVPAA 879
+W+ A+FE G + L +A+ CPK + ++ + + G
Sbjct: 402 TFTFAKVWMHKAHFEIRQGDLAAARKTLGRAIGMCPKDRLFKGYIEMEQKLYEFG---RC 458
Query: 880 RGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLA 939
R + NP + W+ +LE ++ +RAR +L AQ E +W +
Sbjct: 459 RILYEKHIAYNPANCSTWVKWAELERGLDDLDRARAILDMGIAQP----VLDMPEVVWKS 514
Query: 940 AVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLE 977
+ E E EY++ R L + A P+V I A+ E
Sbjct: 515 YIDFEEEEGEYDKTRSLYERLLDKADHPKVWISYAQFE 552
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/570 (21%), Positives = 199/570 (34%), Gaps = 130/570 (22%)
Query: 499 KARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARL 558
++R + + + N WI E + + ARNL
Sbjct: 90 RSRSVFERALNLHANKVTLWIRYVEAELKSRNINFARNL--------------------- 128
Query: 559 QPVDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKA 615
+ +AV H+P ++W K +E R+V+ + +E P+ W A
Sbjct: 129 ---------LDRAVTHLPRVDKLWYKYVWVEEMLGNIPGVRQVFERWMEWQPDEA-AWSA 178
Query: 616 AVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTT 675
++LE R Y+ AR++ + P R W
Sbjct: 179 FIKLEQ--------------------------RYGEYDRAREIFTRFTMVHPEPRN-WIK 211
Query: 676 AAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAI 735
+K EE +G + V ++ +RA+ LS G E E R
Sbjct: 212 WSKFEEEYGTSDRVREVFERAIEELSKYGDEFVEE----------------------RLF 249
Query: 736 IGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAY--FEKNH 793
I Y A A + ARAIY L P K++ L Y FEK +
Sbjct: 250 IAY--------------ARYEAKLHDLDRARAIYKFGLENLPRSKAMLLHKEYTTFEKQY 295
Query: 794 GTRESLE-TLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKA 852
G RE +E +L K H L+ +W A E+ G + + +KA
Sbjct: 296 GDREGVEDVVLSKRRRHYED-----LVRENPKNYDVWFDYARLEEASGDIDRTREVYEKA 350
Query: 853 VAHCPKSEV---------LWLMGAKSKWLAGDVPA-ARGILSLAFQANPNSE----EIWL 898
+A P ++ LW+ A + P AR + + P+ ++W+
Sbjct: 351 IAQVPPTQAKRHWRRYIYLWIFFALWEETEAKNPERARQVYDTCLKLIPHRTFTFAKVWM 410
Query: 899 AAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLA 958
E + AR+ L +A + ++ +++E + E+ R R L
Sbjct: 411 HKAHFEIRQGDLAAARKTLGRAIGMCP-------KDRLFKGYIEMEQKLYEFGRCRILYE 463
Query: 959 KARASAPTP-RVMIQSAKLEWCLDNLERALQLLDEAIK--VFPDFAKLWMMKGQIEEQKN 1015
K A P ++ A+LE LD+L+RA +LD I V +W EE++
Sbjct: 464 KHIAYNPANCSTWVKWAELERGLDDLDRARAILDMGIAQPVLDMPEVVWKSYIDFEEEEG 523
Query: 1016 LLDKAHDTFSQAIKKCPHSVPLWIMLANLE 1045
DK + + + K H +WI A E
Sbjct: 524 EYDKTRSLYERLLDKADHP-KVWISYAQFE 552
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 152/378 (40%), Gaps = 39/378 (10%)
Query: 748 TWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAV 807
W++ A+ Q Y +R+++ +AL +K ++W+R E LL +AV
Sbjct: 74 NWLQYAQWELEQKEYARSRSVFERALNLHANKVTLWIRYVEAELKSRNINFARNLLDRAV 133
Query: 808 AHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGA 867
H P+ + LW K +W+ E+ G + + ++ + P E W
Sbjct: 134 THLPRVDKLWY-------KYVWV-----EEMLGNIPGVRQVFERWMEWQP-DEAAWSAFI 180
Query: 868 KSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAF 927
K + G+ AR I + +P W+ K E E +R R + +A + +
Sbjct: 181 KLEQRYGEYDRAREIFTRFTMVHPEPRN-WIKWSKFEEEYGTSDRVREVFERAIEELSKY 239
Query: 928 QANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMI----------QSAKLE 977
E +++A + E++ ++ +RAR + + P + M+ Q E
Sbjct: 240 GDEFVEERLFIAYARYEAKLHDLDRARAIYKFGLENLPRSKAMLLHKEYTTFEKQYGDRE 299
Query: 978 WCLD-NLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHS-- 1034
D L + + ++ ++ P +W ++EE +D+ + + +AI + P +
Sbjct: 300 GVEDVVLSKRRRHYEDLVRENPKNYDVWFDYARLEEASGDIDRTREVYEKAIAQVPPTQA 359
Query: 1035 -------VPLWIMLANLEERR-KMLIKARSV----LEKGRLRNPNCAELWLAAIRVEIRA 1082
+ LWI A EE K +AR V L+ R A++W+ EIR
Sbjct: 360 KRHWRRYIYLWIFFALWEETEAKNPERARQVYDTCLKLIPHRTFTFAKVWMHKAHFEIRQ 419
Query: 1083 GLKDIANTMMAKALQECP 1100
G A + +A+ CP
Sbjct: 420 GDLAAARKTLGRAIGMCP 437
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 39/240 (16%)
Query: 493 DINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSE--- 549
D+ K+ R VRE NP + W ARLEE +G + R + K + ++
Sbjct: 303 DVVLSKRRRHYEDLVRE-NPKNYDVWFDYARLEEASGDIDRTREVYEKAIAQVPPTQAKR 361
Query: 550 ------------DLWLEAARLQPVDTARAVIAQAVRHIP----TSVRIWIKAADLET--- 590
LW E P + AR V ++ IP T ++W+ A E
Sbjct: 362 HWRRYIYLWIFFALWEETEAKNP-ERARQVYDTCLKLIPHRTFTFAKVWMHKAHFEIRQG 420
Query: 591 ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDARILLSRAVECCPTSVELWLAL 646
+ A R+ +A+ P RL+K +E+E + RIL + + P + W+
Sbjct: 421 DLAAARKTLGRAIGMCPKD-RLFKGYIEMEQKLYEFGRCRILYEKHIAYNPANCSTWVKW 479
Query: 647 ARLE----TYENARKVLNK--ARENIPTDRQIWTTAAKLEEAHG----NNAMVDKIIDRA 696
A LE + AR +L+ A+ + +W + EE G ++ ++++D+A
Sbjct: 480 AELERGLDDLDRARAILDMGIAQPVLDMPEVVWKSYIDFEEEEGEYDKTRSLYERLLDKA 539
Score = 41.2 bits (95), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCA 1069
+EE + F ++ ++ W+ A E +K ++RSV E+ + N
Sbjct: 47 LEELHEYQGRKRKEFESYCQRSGFNLKNWLQYAQWELEQKEYARSRSVFERALNLHANKV 106
Query: 1070 ELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
LW+ + E+++ + A ++ +A+ P LW + +++E
Sbjct: 107 TLWIRYVEAELKSRNINFARNLLDRAVTHLPRVDKLWYKYVWVE 150
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Query: 1002 KLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKG 1061
K W+ Q E ++ ++ F +A+ + V LWI E + + + AR++L++
Sbjct: 73 KNWLQYAQWELEQKEYARSRSVFERALNLHANKVTLWIRYVEAELKSRNINFARNLLDRA 132
Query: 1062 RLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPR 1115
P +LW + VE G + + ++ P+ W+ I LE R
Sbjct: 133 VTHLPRVDKLWYKYVWVEEMLGNIPGVRQVFERWMEWQPDEAA-WSAFIKLEQR 185
>sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var. grubii
serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC
9487) GN=CLF1 PE=3 SV=1
Length = 724
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 129/527 (24%), Positives = 214/527 (40%), Gaps = 68/527 (12%)
Query: 565 RAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE- 620
R +R+ S+ W K A E E + R V+ +AL+ P SV LW ++E
Sbjct: 61 RTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMEL 120
Query: 621 ---DPEDARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIW 673
+ AR L RA+ P LW LE AR++ + + P D+ W
Sbjct: 121 KARNINHARNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDK-AW 179
Query: 674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIR 733
+ KLEE + I +R ++ + N W K E ++ +
Sbjct: 180 QSYIKLEERYNELDRASAIYERW---IACRPIPKNWVAWAK--FEEDRGQPDKAREVFQT 234
Query: 734 AIIGYGVEQEDRKHTWMEDAESCANQGA--------YECARAIYAQALATFPSKKSIWLR 785
A+ +G E+E +E A+S A +E AR IY ALA P KS L
Sbjct: 235 ALEFFGDEEEQ-----VEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLY 289
Query: 786 AAY--FEKNHGTRESLE-TLLQK-------AVAHCPKSEVLWLMGAKSNKKSIWLRAAYF 835
A Y FEK HG R +E T+L K +A+ P + W A+ + + RA
Sbjct: 290 AQYTKFEKQHGDRAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDA--YRADRE 347
Query: 836 EKNHGTRESLETLLQKAVAHCP---------KSEVLWLMGAKSKWL-AGDVPAARGILSL 885
+ + + ++AVA+ P + LWL A + + D AR +
Sbjct: 348 DGEDVEPMRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKA 407
Query: 886 AFQANPNSE----EIWLAAVKLESENNEYERARRL-LAKARAQAGAFQANPNSEEIWLAA 940
A + P+ ++WLA E RRL ++ AR GA +++
Sbjct: 408 AVKLVPHKTFTFAKLWLAYAYFE--------IRRLDVSAARKVLGAGIGMCPKPKLFTGY 459
Query: 941 VKLESENNEYERARRLLAKARASAPT-PRVMIQSAKLEWCLDNLERALQLLDEAIKVFPD 999
++LE E++R R L K P+ IQ ++E +++ ER + + A++ D
Sbjct: 460 IELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLD 519
Query: 1000 FAKL-WMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLE 1045
++ W E + ++A + + + +++ H V +WI A +E
Sbjct: 520 MPEIVWKAYIDFEAGEGERERARNLYERLLERTSH-VKVWISYALME 565
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 180/483 (37%), Gaps = 82/483 (16%)
Query: 495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
N+ +++R + + + +P WI +E + ARNL + + LW +
Sbjct: 89 NEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYK 148
Query: 555 AARLQP----VDTARAVIAQAVRHIPT--SVRIWIKAADLETETKAKRRVYRK--ALEHI 606
L+ V AR + + ++ P + + +IK + E +Y + A I
Sbjct: 149 YVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRASAIYERWIACRPI 208
Query: 607 PNSVRLWKAAVELED----PEDARILLSRAVECCPTSVE-------LWLALARLET---- 651
P + W A + E+ P+ AR + A+E E ++ A AR+ET
Sbjct: 209 PKN---WVAWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETRLKE 265
Query: 652 YENARKVLNKARENIPTDR--QIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVE--- 706
+E AR + A +P + ++ K E+ HG+ A V+ L+ L ++
Sbjct: 266 FERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVE------LTVLGKRRIQYEE 319
Query: 707 ------INREHWFKEAI-----------EAEKAGSVHTCQALIRAIIGYGVEQEDRK--- 746
N + WF A + E + + RA+ E R
Sbjct: 320 ELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKRYWRR 379
Query: 747 --HTWMEDAE-SCANQGAYECARAIYAQALATFPSKK----SIWLRAAYFEKNHGTRESL 799
+ W++ A + Y+ AR +Y A+ P K +WL AYFE +
Sbjct: 380 YIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAA 439
Query: 800 ETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRE--SLETLLQKAVAHCP 857
+L + CPK ++ Y E RE + TL +K + + P
Sbjct: 440 RKVLGAGIGMCPKPKLF---------------TGYIELEMRLREFDRVRTLYEKFLTYDP 484
Query: 858 KSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEI-WLAAVKLESENNEYERARRL 916
W+ + + D R I LA Q + + EI W A + E+ E ERAR L
Sbjct: 485 SLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERARNL 544
Query: 917 LAK 919
+
Sbjct: 545 YER 547
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 180/488 (36%), Gaps = 99/488 (20%)
Query: 748 TWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAV 807
W + A+ A+Q YE +R+++ +AL P +W++ E L +A+
Sbjct: 77 AWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAI 136
Query: 808 AHCPKSEVLW--------LMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQK-------- 851
P+ + LW L+ S + I+ R +E N +S L ++
Sbjct: 137 TLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRAS 196
Query: 852 -------AVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEE-------IW 897
A PK+ V W AK + G AR + A + + EE ++
Sbjct: 197 AIYERWIACRPIPKNWVAW---AKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVF 253
Query: 898 LAAVKLESENNEYERARRL--LAKAR----------AQAGAFQA---------------- 929
A ++E+ E+ERAR + A AR AQ F+
Sbjct: 254 AAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKR 313
Query: 930 ----------NPNSEEIWLAAVKLE----------SENNEYERARRLLAKARASAPTP-- 967
+P + + W + +LE E+ E R R + +A A+ P
Sbjct: 314 RIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALE 373
Query: 968 --------RVMIQSAKLEWC-LDNLERALQLLDEAIKVFPD----FAKLWMMKGQIEEQK 1014
+ +Q A E + +RA + A+K+ P FAKLW+ E ++
Sbjct: 374 KRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRR 433
Query: 1015 NLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLA 1074
+ A I CP L+ LE R + + R++ EK +P+ + W+
Sbjct: 434 LDVSAARKVLGAGIGMCPKP-KLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQ 492
Query: 1075 AIRVEIRAGLKDIANTMMAKALQECPNA-GILWAEAIFLEPRPQRKTKSVDALKK-CEHD 1132
+VE + + A+Q+ + I+W I E + ++ + ++ E
Sbjct: 493 WTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLERT 552
Query: 1133 PHVLLAVS 1140
HV + +S
Sbjct: 553 SHVKVWIS 560
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 16/246 (6%)
Query: 847 TLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESE 906
T + + + S + W A+ + + +R + A +P S ++W+ +E +
Sbjct: 62 TEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELK 121
Query: 907 NNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPT 966
AR L + A P + +W V LE AR++ + P
Sbjct: 122 ARNINHARNLFDR------AITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPN 175
Query: 967 PRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQ 1026
+ KLE + L+RA + + I P K W+ + EE + DKA + F
Sbjct: 176 DKAWQSYIKLEERYNELDRASAIYERWIACRP-IPKNWVAWAKFEEDRGQPDKAREVFQT 234
Query: 1027 AI-------KKCPHSVPLWIMLANLEERRKMLIKARSV--LEKGRLRNPNCAELWLAAIR 1077
A+ ++ + ++ A +E R K +AR + RL A L+ +
Sbjct: 235 ALEFFGDEEEQVEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTK 294
Query: 1078 VEIRAG 1083
E + G
Sbjct: 295 FEKQHG 300
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%)
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCA 1069
+EE + F I+ S+ W A E + ++RSV E+ +P
Sbjct: 50 LEELSEFQARKRTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSV 109
Query: 1070 ELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
+LW+ +E++A + A + +A+ P LW + ++LE
Sbjct: 110 DLWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYKYVYLE 153
Score = 37.7 bits (86), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 97/258 (37%), Gaps = 41/258 (15%)
Query: 491 GGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSED 550
G ++ + K R+ + +P + AW + ARLEE + ++ + E
Sbjct: 304 GVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYER 363
Query: 551 -------------------LWLEAARLQPVDT-----ARAVIAQAVRHIP----TSVRIW 582
LWL+ A + +DT AR V AV+ +P T ++W
Sbjct: 364 AVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLW 423
Query: 583 IKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDARILLSRAVEC 635
+ A E + A R+V + P +L+ +ELE + + R L + +
Sbjct: 424 LAYAYFEIRRLDVSAARKVLGAGIGMCPKP-KLFTGYIELEMRLREFDRVRTLYEKFLTY 482
Query: 636 CPTSVELWLALARLET----YENARKVLNKA-RENIPTDRQIWTTAAKLEEAHGNNAMVD 690
P+ W+ ++E+ +E R + A ++++ +W E G
Sbjct: 483 DPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERAR 542
Query: 691 KIIDRALSSLSANGVEIN 708
+ +R L S V I+
Sbjct: 543 NLYERLLERTSHVKVWIS 560
>sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CLF1 PE=3 SV=1
Length = 726
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 128/520 (24%), Positives = 213/520 (40%), Gaps = 68/520 (13%)
Query: 572 VRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPED 624
+R+ S+ W K A E E + R V+ +AL+ P SV LW ++E +
Sbjct: 68 IRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINH 127
Query: 625 ARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIWTTAAKLE 680
AR L RA+ P LW LE AR++ + + P D+ W + KLE
Sbjct: 128 ARNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDK-AWQSYIKLE 186
Query: 681 EAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGV 740
E + I +R ++ + N W K E ++ + A+ +G
Sbjct: 187 ERYNELDRASAIYER---WIACRPIPKNWVTWAK--FEEDRGQPDKAREVFQTALEFFGD 241
Query: 741 EQEDRKHTWMEDAESCANQGA--------YECARAIYAQALATFPSKKSIWLRAAY--FE 790
E+E +E A+S A +E AR IY ALA P KS L A Y FE
Sbjct: 242 EEEQ-----VEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFE 296
Query: 791 KNHGTRESLE-TLLQK-------AVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTR 842
K HG R +E T+L K +A+ P + W A+ + + RA +
Sbjct: 297 KQHGDRAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDA--YRADREDGEDVEP 354
Query: 843 ESLETLLQKAVAHCP---------KSEVLWLMGAKSKWL-AGDVPAARGILSLAFQANPN 892
+ + ++AVA+ P + LWL A + + D AR + A + P+
Sbjct: 355 MRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPH 414
Query: 893 SE----EIWLAAVKLESENNEYERARRL-LAKARAQAGAFQANPNSEEIWLAAVKLESEN 947
++WLA E RRL ++ AR GA +++ ++LE
Sbjct: 415 KTFTFAKLWLAYAYFE--------IRRLDVSAARKVLGAGIGMCPKPKLFTGYIELEMRL 466
Query: 948 NEYERARRLLAKARASAPT-PRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKL-WM 1005
E++R R L K P+ IQ ++E +++ ER + + A++ D ++ W
Sbjct: 467 REFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWK 526
Query: 1006 MKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLE 1045
E + ++A + + + +++ H V +WI A +E
Sbjct: 527 AYIDFEAGEGERERARNLYERLLERTSH-VKVWISYALME 565
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/480 (21%), Positives = 178/480 (37%), Gaps = 76/480 (15%)
Query: 495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
N+ +++R + + + +P WI +E + ARNL + + LW +
Sbjct: 89 NEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYK 148
Query: 555 AARLQP----VDTARAVIAQAVRHIPT--SVRIWIKAADLETETKAKRRVYRK--ALEHI 606
L+ V AR + + ++ P + + +IK + E +Y + A I
Sbjct: 149 YVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRASAIYERWIACRPI 208
Query: 607 PNSVRLW-KAAVELEDPEDARILLSRAVECCPTSVE-------LWLALARLET----YEN 654
P + W K + P+ AR + A+E E ++ A AR+ET +E
Sbjct: 209 PKNWVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETRLKEFER 268
Query: 655 ARKVLNKARENIPTDR--QIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEI----- 707
AR + A +P + ++ K E+ HG+ A V+ L+ L ++
Sbjct: 269 ARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVE------LTVLGKRRIQYEEELA 322
Query: 708 ----NREHWFKEAI-----------EAEKAGSVHTCQALIRAIIGYGVEQEDRK-----H 747
N + WF A + E + + RA+ E R +
Sbjct: 323 YDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKRYWRRYIY 382
Query: 748 TWMEDAE-SCANQGAYECARAIYAQALATFPSKK----SIWLRAAYFEKNHGTRESLETL 802
W++ A + Y+ AR +Y A+ P K +WL AYFE + +
Sbjct: 383 LWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKV 442
Query: 803 LQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRE--SLETLLQKAVAHCPKSE 860
L + CPK ++ Y E RE + TL +K + + P
Sbjct: 443 LGAGIGMCPKPKLF---------------TGYIELEMRLREFDRVRTLYEKFLTYDPSLS 487
Query: 861 VLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEI-WLAAVKLESENNEYERARRLLAK 919
W+ + + D R I LA Q + + EI W A + E+ E ERAR L +
Sbjct: 488 SAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYER 547
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 180/488 (36%), Gaps = 99/488 (20%)
Query: 748 TWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAV 807
W + A+ A+Q YE +R+++ +AL P +W++ E L +A+
Sbjct: 77 AWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAI 136
Query: 808 AHCPKSEVLW--------LMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQK-------- 851
P+ + LW L+ S + I+ R +E N +S L ++
Sbjct: 137 TLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRAS 196
Query: 852 -------AVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEE-------IW 897
A PK+ V W AK + G AR + A + + EE ++
Sbjct: 197 AIYERWIACRPIPKNWVTW---AKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVF 253
Query: 898 LAAVKLESENNEYERARRL--LAKAR----------AQAGAFQ----------------- 928
A ++E+ E+ERAR + A AR AQ F+
Sbjct: 254 AAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKR 313
Query: 929 ---------ANPNSEEIWLAAVKLE----------SENNEYERARRLLAKARASAPTP-- 967
+P + + W + +LE E+ E R R + +A A+ P
Sbjct: 314 RIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALE 373
Query: 968 --------RVMIQSAKLEWC-LDNLERALQLLDEAIKVFP----DFAKLWMMKGQIEEQK 1014
+ +Q A E + +RA + A+K+ P FAKLW+ E ++
Sbjct: 374 KRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRR 433
Query: 1015 NLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLA 1074
+ A I CP L+ LE R + + R++ EK +P+ + W+
Sbjct: 434 LDVSAARKVLGAGIGMCPKP-KLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQ 492
Query: 1075 AIRVEIRAGLKDIANTMMAKALQECPNA-GILWAEAIFLEPRPQRKTKSVDALKK-CEHD 1132
+VE + + A+Q+ + I+W I E + ++ + ++ E
Sbjct: 493 WTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLERT 552
Query: 1133 PHVLLAVS 1140
HV + +S
Sbjct: 553 SHVKVWIS 560
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 87/229 (37%), Gaps = 14/229 (6%)
Query: 847 TLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESE 906
T + + + S + W A+ + + +R + A +P S ++W+ +E +
Sbjct: 62 TEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELK 121
Query: 907 NNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPT 966
AR L + A P + +W V LE AR++ + P
Sbjct: 122 ARNINHARNLFDR------AITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPN 175
Query: 967 PRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQ 1026
+ KLE + L+RA + + I P K W+ + EE + DKA + F
Sbjct: 176 DKAWQSYIKLEERYNELDRASAIYERWIACRP-IPKNWVTWAKFEEDRGQPDKAREVFQT 234
Query: 1027 AI-------KKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNC 1068
A+ ++ + ++ A +E R K +AR + + R P
Sbjct: 235 ALEFFGDEEEQVEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRS 283
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%)
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCA 1069
+EE + F I+ S+ W A E + ++RSV E+ +P
Sbjct: 50 LEELSEFQARKRTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSV 109
Query: 1070 ELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
+LW+ +E++A + A + +A+ P LW + ++LE
Sbjct: 110 DLWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYKYVYLE 153
Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 97/258 (37%), Gaps = 41/258 (15%)
Query: 491 GGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSED 550
G ++ + K R+ + +P + AW + ARLEE + ++ + E
Sbjct: 304 GVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYER 363
Query: 551 -------------------LWLEAARLQPVDT-----ARAVIAQAVRHIP----TSVRIW 582
LWL+ A + +DT AR V AV+ +P T ++W
Sbjct: 364 AVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLW 423
Query: 583 IKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDARILLSRAVEC 635
+ A E + A R+V + P +L+ +ELE + + R L + +
Sbjct: 424 LAYAYFEIRRLDVSAARKVLGAGIGMCPKP-KLFTGYIELEMRLREFDRVRTLYEKFLTY 482
Query: 636 CPTSVELWLALARLET----YENARKVLNKA-RENIPTDRQIWTTAAKLEEAHGNNAMVD 690
P+ W+ ++E+ +E R + A ++++ +W E G
Sbjct: 483 DPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERAR 542
Query: 691 KIIDRALSSLSANGVEIN 708
+ +R L S V I+
Sbjct: 543 NLYERLLERTSHVKVWIS 560
>sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1
Length = 726
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 128/520 (24%), Positives = 213/520 (40%), Gaps = 68/520 (13%)
Query: 572 VRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPED 624
+R+ S+ W K A E E + R V+ +AL+ P SV LW ++E +
Sbjct: 68 IRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINH 127
Query: 625 ARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIWTTAAKLE 680
AR L RA+ P LW LE AR++ + + P D+ W + KLE
Sbjct: 128 ARNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDK-AWQSYIKLE 186
Query: 681 EAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGV 740
E + I +R ++ + N W K E ++ + A+ +G
Sbjct: 187 ERYNELDRASAIYER---WIACRPIPKNWVTWAK--FEEDRGQPDKAREVFQTALEFFGD 241
Query: 741 EQEDRKHTWMEDAESCANQGA--------YECARAIYAQALATFPSKKSIWLRAAY--FE 790
E+E +E A+S A +E AR IY ALA P KS L A Y FE
Sbjct: 242 EEEQ-----VEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFE 296
Query: 791 KNHGTRESLE-TLLQK-------AVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTR 842
K HG R +E T+L K +A+ P + W A+ + + RA +
Sbjct: 297 KQHGDRAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDA--YRADREDGEDVEP 354
Query: 843 ESLETLLQKAVAHCP---------KSEVLWLMGAKSKWL-AGDVPAARGILSLAFQANPN 892
+ + ++AVA+ P + LWL A + + D AR + A + P+
Sbjct: 355 MRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPH 414
Query: 893 SE----EIWLAAVKLESENNEYERARRL-LAKARAQAGAFQANPNSEEIWLAAVKLESEN 947
++WLA E RRL ++ AR GA +++ ++LE
Sbjct: 415 KTFTFAKLWLAYAYFE--------IRRLDVSAARKVLGAGIGMCPKPKLFTGYIELEMRL 466
Query: 948 NEYERARRLLAKARASAPT-PRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKL-WM 1005
E++R R L K P+ IQ ++E +++ ER + + A++ D ++ W
Sbjct: 467 REFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWK 526
Query: 1006 MKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLE 1045
E + ++A + + + +++ H V +WI A +E
Sbjct: 527 AYIDFEAGEGERERARNLYERLLERTSH-VKVWISYALME 565
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/480 (21%), Positives = 178/480 (37%), Gaps = 76/480 (15%)
Query: 495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
N+ +++R + + + +P WI +E + ARNL + + LW +
Sbjct: 89 NEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYK 148
Query: 555 AARLQP----VDTARAVIAQAVRHIPT--SVRIWIKAADLETETKAKRRVYRK--ALEHI 606
L+ V AR + + ++ P + + +IK + E +Y + A I
Sbjct: 149 YVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRASAIYERWIACRPI 208
Query: 607 PNSVRLW-KAAVELEDPEDARILLSRAVECCPTSVE-------LWLALARLET----YEN 654
P + W K + P+ AR + A+E E ++ A AR+ET +E
Sbjct: 209 PKNWVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETRLKEFER 268
Query: 655 ARKVLNKARENIPTDR--QIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEI----- 707
AR + A +P + ++ K E+ HG+ A V+ L+ L ++
Sbjct: 269 ARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVE------LTVLGKRRIQYEEELA 322
Query: 708 ----NREHWFKEAI-----------EAEKAGSVHTCQALIRAIIGYGVEQEDRK-----H 747
N + WF A + E + + RA+ E R +
Sbjct: 323 YDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKRYWRRYIY 382
Query: 748 TWMEDAE-SCANQGAYECARAIYAQALATFPSKK----SIWLRAAYFEKNHGTRESLETL 802
W++ A + Y+ AR +Y A+ P K +WL AYFE + +
Sbjct: 383 LWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKV 442
Query: 803 LQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRE--SLETLLQKAVAHCPKSE 860
L + CPK ++ Y E RE + TL +K + + P
Sbjct: 443 LGAGIGMCPKPKLF---------------TGYIELEMRLREFDRVRTLYEKFLTYDPSLS 487
Query: 861 VLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEI-WLAAVKLESENNEYERARRLLAK 919
W+ + + D R I LA Q + + EI W A + E+ E ERAR L +
Sbjct: 488 SAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYER 547
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 180/488 (36%), Gaps = 99/488 (20%)
Query: 748 TWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAV 807
W + A+ A+Q YE +R+++ +AL P +W++ E L +A+
Sbjct: 77 AWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAI 136
Query: 808 AHCPKSEVLW--------LMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQK-------- 851
P+ + LW L+ S + I+ R +E N +S L ++
Sbjct: 137 TLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRAS 196
Query: 852 -------AVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEE-------IW 897
A PK+ V W AK + G AR + A + + EE ++
Sbjct: 197 AIYERWIACRPIPKNWVTW---AKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVF 253
Query: 898 LAAVKLESENNEYERARRL--LAKAR----------AQAGAFQ----------------- 928
A ++E+ E+ERAR + A AR AQ F+
Sbjct: 254 AAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKR 313
Query: 929 ---------ANPNSEEIWLAAVKLE----------SENNEYERARRLLAKARASAPTP-- 967
+P + + W + +LE E+ E R R + +A A+ P
Sbjct: 314 RIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALE 373
Query: 968 --------RVMIQSAKLEWC-LDNLERALQLLDEAIKVFP----DFAKLWMMKGQIEEQK 1014
+ +Q A E + +RA + A+K+ P FAKLW+ E ++
Sbjct: 374 KRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRR 433
Query: 1015 NLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLA 1074
+ A I CP L+ LE R + + R++ EK +P+ + W+
Sbjct: 434 LDVSAARKVLGAGIGMCPKP-KLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQ 492
Query: 1075 AIRVEIRAGLKDIANTMMAKALQECPNA-GILWAEAIFLEPRPQRKTKSVDALKK-CEHD 1132
+VE + + A+Q+ + I+W I E + ++ + ++ E
Sbjct: 493 WTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLERT 552
Query: 1133 PHVLLAVS 1140
HV + +S
Sbjct: 553 SHVKVWIS 560
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 87/229 (37%), Gaps = 14/229 (6%)
Query: 847 TLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESE 906
T + + + S + W A+ + + +R + A +P S ++W+ +E +
Sbjct: 62 TEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELK 121
Query: 907 NNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPT 966
AR L + A P + +W V LE AR++ + P
Sbjct: 122 ARNINHARNLFDR------AITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPN 175
Query: 967 PRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQ 1026
+ KLE + L+RA + + I P K W+ + EE + DKA + F
Sbjct: 176 DKAWQSYIKLEERYNELDRASAIYERWIACRP-IPKNWVTWAKFEEDRGQPDKAREVFQT 234
Query: 1027 AI-------KKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNC 1068
A+ ++ + ++ A +E R K +AR + + R P
Sbjct: 235 ALEFFGDEEEQVEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRS 283
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%)
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCA 1069
+EE + F I+ S+ W A E + ++RSV E+ +P
Sbjct: 50 LEELSEFQARKRTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSV 109
Query: 1070 ELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
+LW+ +E++A + A + +A+ P LW + ++LE
Sbjct: 110 DLWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYKYVYLE 153
Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 97/258 (37%), Gaps = 41/258 (15%)
Query: 491 GGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSED 550
G ++ + K R+ + +P + AW + ARLEE + ++ + E
Sbjct: 304 GVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYER 363
Query: 551 -------------------LWLEAARLQPVDT-----ARAVIAQAVRHIP----TSVRIW 582
LWL+ A + +DT AR V AV+ +P T ++W
Sbjct: 364 AVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLW 423
Query: 583 IKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDARILLSRAVEC 635
+ A E + A R+V + P +L+ +ELE + + R L + +
Sbjct: 424 LAYAYFEIRRLDVSAARKVLGAGIGMCPKP-KLFTGYIELEMRLREFDRVRTLYEKFLTY 482
Query: 636 CPTSVELWLALARLET----YENARKVLNKA-RENIPTDRQIWTTAAKLEEAHGNNAMVD 690
P+ W+ ++E+ +E R + A ++++ +W E G
Sbjct: 483 DPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERAR 542
Query: 691 KIIDRALSSLSANGVEIN 708
+ +R L S V I+
Sbjct: 543 NLYERLLERTSHVKVWIS 560
>sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2
SV=1
Length = 690
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 193/485 (39%), Gaps = 35/485 (7%)
Query: 518 WIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQ----PVDTARAVIAQAVR 573
WI A+ EE ++Q AR++ + + + + LWL+ A ++ V+ AR + +A+
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 143
Query: 574 HIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDAR 626
+P + W K +E R+V+ + +E P + W + + E + E AR
Sbjct: 144 TLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE-QAWHSYINFELRYKEVERAR 202
Query: 627 ILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENI---PTDRQIWTTAAKL 679
+ R V P +V+ W+ AR E + +ARKV +A E D ++ AK
Sbjct: 203 TIYERFVLVHP-AVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKF 261
Query: 680 EEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYG 739
EE V I AL +S + E + I +K G + +I + +
Sbjct: 262 EENQKEFERVRVIYKYALDRISKQEAQ---ELFKNYTIFEKKFGDRRGIEDIIVSKRRFQ 318
Query: 740 VEQEDRKH-----TWMEDAESCANQGAYECARAIYAQALATFP--SKKSIWLRAAYFEKN 792
E+E + + W + + + R +Y +A+A P +K W R Y N
Sbjct: 319 YEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVN 378
Query: 793 HGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKA 852
+ E LE + ++ + + K +WL A FE L +
Sbjct: 379 YALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRALGTS 438
Query: 853 VAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYER 912
+ CPK++ L+ + + + R + + P + W+ +LE+ + ER
Sbjct: 439 IGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIER 497
Query: 913 ARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQ 972
AR + A +Q E +W + + E E E ER R L + +V I
Sbjct: 498 ARAIYELAISQPRL----DMPEVLWKSYIDFEIEQEETERTRNLYRQLLQRTQHVKVWIS 553
Query: 973 SAKLE 977
A+ E
Sbjct: 554 FAQFE 558
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 113/540 (20%), Positives = 210/540 (38%), Gaps = 65/540 (12%)
Query: 565 RAVIAQAVRHIPTSVRIWIKAADLE---TETKAKRRVYRKALEHIPNSVRLWKAAVELE- 620
R +R T + WIK A E E + R +Y +AL+ ++ LW E+E
Sbjct: 67 RKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEM 126
Query: 621 ---DPEDARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIW 673
AR + RA+ P + W +E AR+V + E P + Q W
Sbjct: 127 KNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE-QAW 185
Query: 674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEA-IEAEKAGSVHTCQALI 732
+ E + I +R + L V+ +W K A E + A H +
Sbjct: 186 HSYINFELRYKEVERARTIYERFV--LVHPAVK----NWIKYARFEEKHAYFAHARKVYE 239
Query: 733 RAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAY--FE 790
RA+ +G E D +H ++ A+ NQ +E R IY AL +++ L Y FE
Sbjct: 240 RAVEFFGDEHMD-EHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFE 298
Query: 791 KNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQ 850
K G R +E ++ + EV A + W ++ +++ + +
Sbjct: 299 KKFGDRRGIEDIIVSKRRFQYEEEV----KANPHNYDAWFDYLRLVESDAEADTVREVYE 354
Query: 851 KAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWL-AAVKLESENNE 909
+A+A+ P + K W R I +W+ A+ E E +
Sbjct: 355 RAIANVPP------IQEKRHW-------KRYIY------------LWVNYALYEELEAKD 389
Query: 910 YERARRLLAKARAQAGAFQANPNSE----EIWLAAVKLESENNEYERARRLLAKARASAP 965
ER R++ + + P+ + ++WL + E ARR L + P
Sbjct: 390 PERTRQVYQ------ASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRALGTSIGKCP 443
Query: 966 TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFS 1025
++ +LE L +R +L ++ ++ P+ W+ ++E +++A +
Sbjct: 444 KNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYE 503
Query: 1026 QAIKKCPHSVP--LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAG 1083
AI + +P LW + E ++ + R+ L + L+ ++W++ + E+ +G
Sbjct: 504 LAISQPRLDMPEVLWKSYIDFEIEQEETERTRN-LYRQLLQRTQHVKVWISFAQFELSSG 562
Score = 40.8 bits (94), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 123/322 (38%), Gaps = 36/322 (11%)
Query: 971 IQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKK 1030
I+ A+ E L ++RA + + A+ V LW+ ++E + ++ A + + +AI
Sbjct: 85 IKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITT 144
Query: 1031 CPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANT 1090
P W +EE + AR V E+ P + W + I E+R + A T
Sbjct: 145 LPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPE-EQAWHSYINFELRYKEVERART 203
Query: 1091 MMAKALQECPNAGILWAEAIFLEPRPQ----RKT--KSVDALKKCEHDPHVLLAVSKLFW 1144
+ + + P A F E RK ++V+ D H+ +A +K
Sbjct: 204 IYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKF-- 261
Query: 1145 CENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKN---------- 1194
+NQK R + ++D + K E L +F E K
Sbjct: 262 --EENQK----EFERVRVIYKYALDRISKQE--AQELFKNYTIF--EKKFGDRRGIEDII 311
Query: 1195 -QKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAEP--KHGENWCR 1251
K R + VK +P DAW + + + +T EV +R +A P + +W R
Sbjct: 312 VSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKR 371
Query: 1252 VAKNVSNWKLPRETILSLVAKD 1273
N+ L E L AKD
Sbjct: 372 YIYLWVNYALYEE----LEAKD 389
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 79/427 (18%), Positives = 164/427 (38%), Gaps = 42/427 (9%)
Query: 827 SIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLA 886
S W++ A +E++ + ++ ++A+ ++ LWL A+ + V AR I A
Sbjct: 82 SNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRA 141
Query: 887 FQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESE 946
P + W +E AR++ + + P E+ W + + E
Sbjct: 142 ITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERW------MEWQP-EEQAWHSYINFELR 194
Query: 947 NNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDF---AKL 1003
E ERAR + + P + I+ A+ E A ++ + A++ F D L
Sbjct: 195 YKEVERARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHL 254
Query: 1004 WMMKGQIEEQKNLLDKAHDTFSQAIKKCP--HSVPLW----IMLANLEERRKM----LIK 1053
++ + EE + ++ + A+ + + L+ I +RR + + K
Sbjct: 255 YVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSK 314
Query: 1054 ARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECP--NAGILWAEAIF 1111
R E+ NP+ + W +R+ D + +A+ P W I+
Sbjct: 315 RRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIY 374
Query: 1112 L----------EPRPQRKTKSVDALKKCEHDPHVLLAVSK--LFWCENKNQKCHRSGSRR 1159
L E + +T+ V E PH +K L++ + + ++ + +RR
Sbjct: 375 LWVNYALYEELEAKDPERTRQV-YQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARR 433
Query: 1160 CMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFY 1219
+G ++ KC + + +L + +CR+ + + ++ P+ +W F
Sbjct: 434 ALGT------SIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFA 486
Query: 1220 KFEIING 1226
+ E I G
Sbjct: 487 ELETILG 493
>sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=2 SV=1
Length = 690
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 193/485 (39%), Gaps = 35/485 (7%)
Query: 518 WIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQ----PVDTARAVIAQAVR 573
WI A+ EE ++Q AR++ + + + + LWL+ A ++ V+ AR + +A+
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 143
Query: 574 HIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDAR 626
+P + W K +E R+V+ + +E P + W + + E + E AR
Sbjct: 144 TLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE-QAWHSYINFELRYKEVERAR 202
Query: 627 ILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENI---PTDRQIWTTAAKL 679
+ R V P +V+ W+ AR E + +ARKV +A E D ++ AK
Sbjct: 203 TIYERFVLVHP-AVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKF 261
Query: 680 EEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYG 739
EE V I AL +S + E + I +K G + +I + +
Sbjct: 262 EENQKEFERVRVIYKYALDRISKQEAQ---ELFKNYTIFEKKFGDRRGIEDIIVSKRRFQ 318
Query: 740 VEQEDRKH-----TWMEDAESCANQGAYECARAIYAQALATFP--SKKSIWLRAAYFEKN 792
E+E + + W + + + R +Y +A+A P +K W R Y N
Sbjct: 319 YEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVN 378
Query: 793 HGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKA 852
+ E LE + ++ + + K +WL A FE L +
Sbjct: 379 YALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRALGTS 438
Query: 853 VAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYER 912
+ CPK++ L+ + + + R + + P + W+ +LE+ + ER
Sbjct: 439 IGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIER 497
Query: 913 ARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQ 972
AR + A +Q E +W + + E E E ER R L + +V I
Sbjct: 498 ARAIYELAISQPRL----DMPEVLWKSYIDFEIEQEETERTRNLYRQLLQRTQHVKVWIS 553
Query: 973 SAKLE 977
A+ E
Sbjct: 554 FAQFE 558
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 113/540 (20%), Positives = 210/540 (38%), Gaps = 65/540 (12%)
Query: 565 RAVIAQAVRHIPTSVRIWIKAADLE---TETKAKRRVYRKALEHIPNSVRLWKAAVELE- 620
R +R T + WIK A E E + R +Y +AL+ ++ LW E+E
Sbjct: 67 RKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEM 126
Query: 621 ---DPEDARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIW 673
AR + RA+ P + W +E AR+V + E P + Q W
Sbjct: 127 KNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE-QAW 185
Query: 674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEA-IEAEKAGSVHTCQALI 732
+ E + I +R + L V+ +W K A E + A H +
Sbjct: 186 HSYINFELRYKEVERARTIYERFV--LVHPAVK----NWIKYARFEEKHAYFAHARKVYE 239
Query: 733 RAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAY--FE 790
RA+ +G E D +H ++ A+ NQ +E R IY AL +++ L Y FE
Sbjct: 240 RAVEFFGDEHMD-EHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFE 298
Query: 791 KNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQ 850
K G R +E ++ + EV A + W ++ +++ + +
Sbjct: 299 KKFGDRRGIEDIIVSKRRFQYEEEV----KANPHNYDAWFDYLRLVESDAEADTVREVYE 354
Query: 851 KAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWL-AAVKLESENNE 909
+A+A+ P + K W R I +W+ A+ E E +
Sbjct: 355 RAIANVPP------IQEKRHW-------KRYIY------------LWVNYALYEELEAKD 389
Query: 910 YERARRLLAKARAQAGAFQANPNSE----EIWLAAVKLESENNEYERARRLLAKARASAP 965
ER R++ + + P+ + ++WL + E ARR L + P
Sbjct: 390 PERTRQVYQ------ASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRALGTSIGKCP 443
Query: 966 TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFS 1025
++ +LE L +R +L ++ ++ P+ W+ ++E +++A +
Sbjct: 444 KNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYE 503
Query: 1026 QAIKKCPHSVP--LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAG 1083
AI + +P LW + E ++ + R+ L + L+ ++W++ + E+ +G
Sbjct: 504 LAISQPRLDMPEVLWKSYIDFEIEQEETERTRN-LYRQLLQRTQHVKVWISFAQFELSSG 562
Score = 40.8 bits (94), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 123/322 (38%), Gaps = 36/322 (11%)
Query: 971 IQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKK 1030
I+ A+ E L ++RA + + A+ V LW+ ++E + ++ A + + +AI
Sbjct: 85 IKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITT 144
Query: 1031 CPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANT 1090
P W +EE + AR V E+ P + W + I E+R + A T
Sbjct: 145 LPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPE-EQAWHSYINFELRYKEVERART 203
Query: 1091 MMAKALQECPNAGILWAEAIFLEPRPQ----RKT--KSVDALKKCEHDPHVLLAVSKLFW 1144
+ + + P A F E RK ++V+ D H+ +A +K
Sbjct: 204 IYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKF-- 261
Query: 1145 CENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKN---------- 1194
+NQK R + ++D + K E L +F E K
Sbjct: 262 --EENQK----EFERVRVIYKYALDRISKQE--AQELFKNYTIF--EKKFGDRRGIEDII 311
Query: 1195 -QKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAEP--KHGENWCR 1251
K R + VK +P DAW + + + +T EV +R +A P + +W R
Sbjct: 312 VSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKR 371
Query: 1252 VAKNVSNWKLPRETILSLVAKD 1273
N+ L E L AKD
Sbjct: 372 YIYLWVNYALYEE----LEAKD 389
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 79/427 (18%), Positives = 164/427 (38%), Gaps = 42/427 (9%)
Query: 827 SIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLA 886
S W++ A +E++ + ++ ++A+ ++ LWL A+ + V AR I A
Sbjct: 82 SNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRA 141
Query: 887 FQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESE 946
P + W +E AR++ + + P E+ W + + E
Sbjct: 142 ITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERW------MEWQP-EEQAWHSYINFELR 194
Query: 947 NNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDF---AKL 1003
E ERAR + + P + I+ A+ E A ++ + A++ F D L
Sbjct: 195 YKEVERARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHL 254
Query: 1004 WMMKGQIEEQKNLLDKAHDTFSQAIKKCP--HSVPLW----IMLANLEERRKM----LIK 1053
++ + EE + ++ + A+ + + L+ I +RR + + K
Sbjct: 255 YVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSK 314
Query: 1054 ARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECP--NAGILWAEAIF 1111
R E+ NP+ + W +R+ D + +A+ P W I+
Sbjct: 315 RRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIY 374
Query: 1112 L----------EPRPQRKTKSVDALKKCEHDPHVLLAVSK--LFWCENKNQKCHRSGSRR 1159
L E + +T+ V E PH +K L++ + + ++ + +RR
Sbjct: 375 LWVNYALYEELEAKDPERTRQV-YQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARR 433
Query: 1160 CMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFY 1219
+G ++ KC + + +L + +CR+ + + ++ P+ +W F
Sbjct: 434 ALGT------SIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFA 486
Query: 1220 KFEIING 1226
+ E I G
Sbjct: 487 ELETILG 493
>sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4
Length = 848
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 193/485 (39%), Gaps = 35/485 (7%)
Query: 518 WIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQ----PVDTARAVIAQAVR 573
WI A+ EE ++Q AR++ + + + + LWL+ A ++ V+ AR + +A+
Sbjct: 245 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 304
Query: 574 HIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDAR 626
+P + W K +E R+V+ + +E P + W + + E + + AR
Sbjct: 305 TLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE-QAWHSYINFELRYKEVDRAR 363
Query: 627 ILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENI---PTDRQIWTTAAKL 679
+ R V P V+ W+ AR E + +ARKV +A E D ++ AK
Sbjct: 364 TIYERFVLVHP-DVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKF 422
Query: 680 EEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYG 739
EE V I AL +S + E + I +K G + +I + +
Sbjct: 423 EENQKEFERVRVIYKYALDRISKQDAQ---ELFKNYTIFEKKFGDRRGIEDIIVSKRRFQ 479
Query: 740 VEQEDRKH-----TWMEDAESCANQGAYECARAIYAQALATFP--SKKSIWLRAAYFEKN 792
E+E + + W + + E R +Y +A+A P +K W R Y N
Sbjct: 480 YEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWIN 539
Query: 793 HGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKA 852
+ E LE + ++ + + K +W+ A FE L +
Sbjct: 540 YALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTS 599
Query: 853 VAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYER 912
+ CPK++ L+ + + + + R + + P + W+ +LE+ + +R
Sbjct: 600 IGKCPKNK-LFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDR 658
Query: 913 ARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQ 972
AR + A +Q E +W + + E E E ER R L + +V I
Sbjct: 659 ARAIYELAISQPRL----DMPEVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHVKVWIS 714
Query: 973 SAKLE 977
A+ E
Sbjct: 715 FAQFE 719
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 113/540 (20%), Positives = 209/540 (38%), Gaps = 65/540 (12%)
Query: 565 RAVIAQAVRHIPTSVRIWIKAADLE---TETKAKRRVYRKALEHIPNSVRLWKAAVELE- 620
R +R T + WIK A E E + R +Y +AL+ ++ LW E+E
Sbjct: 228 RKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEM 287
Query: 621 ---DPEDARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIW 673
AR + RA+ P + W +E AR+V + E P + Q W
Sbjct: 288 KNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP-EEQAW 346
Query: 674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEA-IEAEKAGSVHTCQALI 732
+ E + I +R + V + ++W K A E + A H +
Sbjct: 347 HSYINFELRYKEVDRARTIYERFVL------VHPDVKNWIKYARFEEKHAYFAHARKVYE 400
Query: 733 RAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAY--FE 790
RA+ +G E D +H ++ A+ NQ +E R IY AL + + L Y FE
Sbjct: 401 RAVEFFGDEHMD-EHLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFE 459
Query: 791 KNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQ 850
K G R +E ++ + EV A + W ++ E++ + +
Sbjct: 460 KKFGDRRGIEDIIVSKRRFQYEEEV----KANPHNYDAWFDYLRLVESDAEAEAVREVYE 515
Query: 851 KAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWL-AAVKLESENNE 909
+A+A+ P + K W R I +W+ A+ E E +
Sbjct: 516 RAIANVPP------IQEKRHW-------KRYIY------------LWINYALYEELEAKD 550
Query: 910 YERARRLLAKARAQAGAFQANPNSE----EIWLAAVKLESENNEYERARRLLAKARASAP 965
ER R++ + + P+ + ++W+ + E ARR L + P
Sbjct: 551 PERTRQVYQ------ASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCP 604
Query: 966 TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFS 1025
++ +LE L +R +L ++ ++ P+ W+ ++E +D+A +
Sbjct: 605 KNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYE 664
Query: 1026 QAIKKCPHSVP--LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAG 1083
AI + +P LW + E ++ + R+ L + L+ ++W++ + E+ +G
Sbjct: 665 LAISQPRLDMPEVLWKSYIDFEIEQEETERTRN-LYRRLLQRTQHVKVWISFAQFELSSG 723
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 123/322 (38%), Gaps = 36/322 (11%)
Query: 971 IQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKK 1030
I+ A+ E L ++RA + + A+ V LW+ ++E + ++ A + + +AI
Sbjct: 246 IKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITT 305
Query: 1031 CPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANT 1090
P W +EE + AR V E+ P + W + I E+R D A T
Sbjct: 306 LPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPE-EQAWHSYINFELRYKEVDRART 364
Query: 1091 MMAKALQECPNAGILWAEAIFLEPRPQ----RKT--KSVDALKKCEHDPHVLLAVSKLFW 1144
+ + + P+ A F E RK ++V+ D H+ +A +K
Sbjct: 365 IYERFVLVHPDVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKF-- 422
Query: 1145 CENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKN---------- 1194
+NQK R + ++D + K D L +F E K
Sbjct: 423 --EENQK----EFERVRVIYKYALDRISK--QDAQELFKNYTIF--EKKFGDRRGIEDII 472
Query: 1195 -QKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAEP--KHGENWCR 1251
K R + VK +P DAW + + + E EV +R +A P + +W R
Sbjct: 473 VSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKR 532
Query: 1252 VAKNVSNWKLPRETILSLVAKD 1273
N+ L E L AKD
Sbjct: 533 YIYLWINYALYEE----LEAKD 550
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 69/384 (17%), Positives = 141/384 (36%), Gaps = 46/384 (11%)
Query: 749 WMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVA 808
W++ A+ + + AR+IY +AL ++WL+ A E + + +A+
Sbjct: 245 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 304
Query: 809 HCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAK 868
P+ W + Y E+ G + ++ + P+ + W
Sbjct: 305 TLPRV------------NQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQA-WHSYIN 351
Query: 869 SKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQ 928
+ +V AR I +P+ + W+ + E ++ + AR++ +A F
Sbjct: 352 FELRYKEVDRARTIYERFVLVHPDVKN-WIKYARFEEKHAYFAHARKVYERA---VEFFG 407
Query: 929 ANPNSEEIWLAAVKLESENNEYERARRLLAKA--RASAPTPRVMIQSAKLEWCLDNLERA 986
E +++A K E E+ER R + A R S + + ++ + R
Sbjct: 408 DEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRG 467
Query: 987 LQLL---------DEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCP----- 1032
++ + +E +K P W ++ E + + + +AI P
Sbjct: 468 IEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEK 527
Query: 1033 ----HSVPLWIMLANLEE-------RRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIR 1081
+ LWI A EE R + + +A LE + A++W+ + EIR
Sbjct: 528 RHWKRYIYLWINYALYEELEAKDPERTRQVYQAS--LELIPHKKFTFAKMWILYAQFEIR 585
Query: 1082 AGLKDIANTMMAKALQECPNAGIL 1105
+A + ++ +CP +
Sbjct: 586 QKNLSLARRALGTSIGKCPKNKLF 609
>sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CLF1 PE=3 SV=1
Length = 781
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 188/473 (39%), Gaps = 74/473 (15%)
Query: 582 WIKAADLET---ETKAKRRVYRKALE----HIPNSVRLWKAAVELEDPEDARILLSRAVE 634
WIK A E E R +Y +AL+ H+P +R + +++ + + AR L RAV
Sbjct: 73 WIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQHARNLYDRAVS 132
Query: 635 CCPTSVELWLALARLETYENARKVLNKARENIPTDRQI------WTTAAKLEEAHGNNAM 688
P +LW LE ++L NIP RQ+ W K A+ N +
Sbjct: 133 ILPRIDQLWYKYVHLE------ELLG----NIPGTRQVFERWMKWEPEEKAWHAYINLEV 182
Query: 689 VDKIIDRALSSLSANGVEINR--EHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRK 746
+DRA S++ V + + W + A E G++ + + + + Y E ED
Sbjct: 183 RYDELDRA-SAIWERCVTCHPVPKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDA- 240
Query: 747 HTWMEDAESCANQGA--------YECARAIYAQALATFPSKKSIWLRAAY--FEKNHGTR 796
ME A+S A YE AR IY AL P KS + ++Y FEK GT
Sbjct: 241 ---MEKAQSVFTAFAKMETRLKEYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTM 297
Query: 797 ESLE-TLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAH 855
S+E T++ K + G W + E++ R L T
Sbjct: 298 NSVEDTVIGKRRIQYEEELAAQEAGGAPADYDTWFDYSRLEED-AYRALLAT-------- 348
Query: 856 CPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEE---------IWL-AAVKLES 905
G L V R + A P+S+E +WL A+ E
Sbjct: 349 ----------GGSQDQLQQAVKRVREVYERAIAQVPSSQEKRDWRRYIFLWLRYALFEEI 398
Query: 906 ENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAP 965
+ +Y+R R + A A ++W+ + E E AR++L A AP
Sbjct: 399 DTRDYDRTREIYKAAIALVP--HRRFTFAKLWVQYARFEVRRLELTAARKILGAAIGMAP 456
Query: 966 TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLD 1018
++ +LE L +RA ++ ++A++ P ++ W+ ++E KNL D
Sbjct: 457 KLKLFSSYIELEVSLKEFDRARKIYEKALEWDPTNSQTWVRFAELE--KNLFD 507
Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 206/520 (39%), Gaps = 92/520 (17%)
Query: 495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
++ + R + + + P+H P W+ E VQ ARNL + + LW +
Sbjct: 84 GEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQHARNLYDRAVSILPRIDQLWYK 143
Query: 555 AARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRR---VYRKALEHIP 607
L+ + R V + ++ P + W +LE R ++ + + P
Sbjct: 144 YVHLEELLGNIPGTRQVFERWMKWEPEE-KAWHAYINLEVRYDELDRASAIWERCVTCHP 202
Query: 608 ---NSVRLWKAAVELEDPEDARILLSRAVE-------CCPTSVELWLALARLET----YE 653
+R K + + E ARI+ A++ + ++ A A++ET YE
Sbjct: 203 VPKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDAMEKAQSVFTAFAKMETRLKEYE 262
Query: 654 NARKVLNKARENIPTDRQ--IWTTAAKLEEAHGN-NAMVDKII-------DRALSSLSAN 703
AR + A E +P + I+++ + E+ G N++ D +I + L++ A
Sbjct: 263 RARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSVEDTVIGKRRIQYEEELAAQEAG 322
Query: 704 GVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYE 763
G + + WF + E A RA++ G Q+ Q A +
Sbjct: 323 GAPADYDTWFDYSRLEEDA---------YRALLATGGSQDQL-------------QQAVK 360
Query: 764 CARAIYAQALATFPSKKS---------IWLRAAYFEKNHGTRESLET--LLQKAVAHCPK 812
R +Y +A+A PS + +WLR A FE+ TR+ T + + A+A P
Sbjct: 361 RVREVYERAIAQVPSSQEKRDWRRYIFLWLRYALFEEI-DTRDYDRTREIYKAAIALVPH 419
Query: 813 SEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWL 872
+ +W++ A FE + +L A+ PK ++ S ++
Sbjct: 420 RRFTF--------AKLWVQYARFEVRRLELTAARKILGAAIGMAPKLKLF------SSYI 465
Query: 873 AGDVPA-----ARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAF 927
+V AR I A + +P + + W+ +LE + +RAR L QA
Sbjct: 466 ELEVSLKEFDRARKIYEKALEWDPTNSQTWVRFAELEKNLFDTDRARALFELGVGQAEGG 525
Query: 928 QANPN---SEEIWLAAVKLESENNEYERA----RRLLAKA 960
+A+ E +W A + E E E+E+ RLLAK+
Sbjct: 526 EASGGLDMPEIVWKAYIDFEFEEREWEKVDALYERLLAKS 565
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 162/438 (36%), Gaps = 79/438 (18%)
Query: 748 TWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAV 807
TW++ A A+QG + R+IY +AL P +WLR E + L +AV
Sbjct: 72 TWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQHARNLYDRAV 131
Query: 808 AHCPKSEVLW--------LMGAKSNKKSI---WLRAAYFEKNHGTRESLETL---LQKAV 853
+ P+ + LW L+G + + W++ EK +LE L +A
Sbjct: 132 SILPRIDQLWYKYVHLEELLGNIPGTRQVFERWMKWEPEEKAWHAYINLEVRYDELDRAS 191
Query: 854 A------HCPKSEVLWLMGAKSKWLAGDVPAARGILSLAF-------QANPNSEEIWLAA 900
A C W+ AK + G++ AR + +A A ++ ++ A
Sbjct: 192 AIWERCVTCHPVPKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDAMEKAQSVFTAF 251
Query: 901 VKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENN------------ 948
K+E+ EYERAR + A + SE I+ + + E +
Sbjct: 252 AKMETRLKEYERARVIYKYALERL----PRSKSEGIYSSYTRFEKQFGTMNSVEDTVIGK 307
Query: 949 ---EYERARRLLAKARASAPTPR-VMIQSAKLE-----------WCLDNLERAL----QL 989
+YE L A+ AP ++LE D L++A+ ++
Sbjct: 308 RRIQYE--EELAAQEAGGAPADYDTWFDYSRLEEDAYRALLATGGSQDQLQQAVKRVREV 365
Query: 990 LDEAIKVFPD---------FAKLWMMKGQIEE-QKNLLDKAHDTFSQAIKKCPHS----V 1035
+ AI P + LW+ EE D+ + + AI PH
Sbjct: 366 YERAIAQVPSSQEKRDWRRYIFLWLRYALFEEIDTRDYDRTREIYKAAIALVPHRRFTFA 425
Query: 1036 PLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKA 1095
LW+ A E RR L AR +L P +L+ + I +E+ D A + KA
Sbjct: 426 KLWVQYARFEVRRLELTAARKILGAAIGMAPKL-KLFSSYIELEVSLKEFDRARKIYEKA 484
Query: 1096 LQECPNAGILWAEAIFLE 1113
L+ P W LE
Sbjct: 485 LEWDPTNSQTWVRFAELE 502
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 28/222 (12%)
Query: 827 SIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLA 886
S W++ A +E + G + ++ ++A+ P LWL + + +V AR + A
Sbjct: 71 STWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQHARNLYDRA 130
Query: 887 FQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESE 946
P +++W V LE R++ + + E+ W A + LE
Sbjct: 131 VSILPRIDQLWYKYVHLEELLGNIPGTRQVFER-------WMKWEPEEKAWHAYINLEVR 183
Query: 947 NNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERA---LQL-----------LDE 992
+E +RA + + P P+ I+ AK E NLE+A Q+ +++
Sbjct: 184 YDELDRASAIWERCVTCHPVPKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDAMEK 243
Query: 993 AIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHS 1034
A VF FAK M+ +++E ++A + A+++ P S
Sbjct: 244 AQSVFTAFAK---METRLKE----YERARVIYKYALERLPRS 278
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 110/289 (38%), Gaps = 43/289 (14%)
Query: 781 SIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHG 840
S W++ A +E + G + ++ ++A+ P LWL + ++ + +R +N
Sbjct: 71 STWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWL---RYTEQELKMRNVQHARN-- 125
Query: 841 TRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAA 900
L +AV+ P+ + LW + L G++P R + + P E+ W A
Sbjct: 126 -------LYDRAVSILPRIDQLWYKYVHLEELLGNIPGTRQVFERWMKWEPE-EKAWHAY 177
Query: 901 VKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKA 960
+ LE +E +RA + + +P ++ W+ K E + E+AR + A
Sbjct: 178 INLEVRYDELDRASAIWER------CVTCHPVPKQ-WIRWAKFEEDRGNLEKARIVFQMA 230
Query: 961 --------RASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAK--LWMMKGQI 1010
A V AK+E L ERA + A++ P ++ +
Sbjct: 231 LDYIGEDEDAMEKAQSVFTAFAKMETRLKEYERARVIYKYALERLPRSKSEGIYSSYTRF 290
Query: 1011 EEQKNLLDKAHDTF-------------SQAIKKCPHSVPLWIMLANLEE 1046
E+Q ++ DT +Q P W + LEE
Sbjct: 291 EKQFGTMNSVEDTVIGKRRIQYEEELAAQEAGGAPADYDTWFDYSRLEE 339
Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 139/403 (34%), Gaps = 75/403 (18%)
Query: 515 PPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRH 574
P WI A+ EE G ++ AR + + ED +E A Q V TA A + ++
Sbjct: 204 PKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDA-MEKA--QSVFTAFAKMETRLK- 259
Query: 575 IPTSVRIWIKAADLETETKAKRRVYRKALEHIPNS---------VRLWKAAVELEDPEDA 625
E + R +Y+ ALE +P S R K + ED
Sbjct: 260 ----------------EYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSVEDT 303
Query: 626 RI----------LLSRAVECCPTSVELWLALARLE-------------------TYENAR 656
I L ++ P + W +RLE + R
Sbjct: 304 VIGKRRIQYEEELAAQEAGGAPADYDTWFDYSRLEEDAYRALLATGGSQDQLQQAVKRVR 363
Query: 657 KVLNKARENIPTDRQ---------IWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEI 707
+V +A +P+ ++ +W A EE + + I +A +L +
Sbjct: 364 EVYERAIAQVPSSQEKRDWRRYIFLWLRYALFEEIDTRDYDRTREIYKAAIALVPHRRFT 423
Query: 708 NREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARA 767
+ W + A + + + ++ A IG + + E + ++ AR
Sbjct: 424 FAKLWVQYARFEVRRLELTAARKILGAAIGMA----PKLKLFSSYIELEVSLKEFDRARK 479
Query: 768 IYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKS 827
IY +AL P+ W+R A EKN + L + V E G +
Sbjct: 480 IYEKALEWDPTNSQTWVRFAELEKNLFDTDRARALFELGVGQAEGGEA---SGGLDMPEI 536
Query: 828 IWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSK 870
+W FE E ++ L ++ +A +V W+ A SK
Sbjct: 537 VWKAYIDFEFEEREWEKVDALYERLLAKSGHVKV-WISYALSK 578
>sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=CLF1 PE=3 SV=1
Length = 676
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 129/573 (22%), Positives = 218/573 (38%), Gaps = 79/573 (13%)
Query: 563 TARAVIAQAVRHIPTSVRIWIKAADLETETKA---KRRVYRKALEHIPNSVRLW--KAAV 617
+A ++ +A T ++ + ADLE + KR+ Y AL + W A
Sbjct: 16 SAEQILLEAYERKETPLQQTEQIADLEELAEYQGRKRQEYEGALRRNRLNTGQWMRYAQW 75
Query: 618 ELEDPEDARI--LLSRAVECCPTSVELWLALARLETYE----NARKVLNKARENIPTDRQ 671
ELE E AR + RA+E T V W+ + E E +AR +L++A +P +
Sbjct: 76 ELEQREFARARSVFERALEVNSTHVPTWIRYIQCELKEKNINHARNLLDRAVTLLPRVDK 135
Query: 672 IWTTAAKLEEAHGNNAMVDKIIDRALS---SLSANGVEINREHWFKEAIEAEKAGSVHTC 728
+W T EE GN A + +R + ++A +N E ++E A
Sbjct: 136 LWFTYVATEETLGNIAGCRAVFERWMHWRPPVTAWAAYVNMEKRYREFDRA--------- 186
Query: 729 QALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPS---------K 779
R I+ V W + A+ G + R +YA + T
Sbjct: 187 ----RGILRRYVTVHPGAPAWNKWAKFEMEAGNRDTVREVYALGIDTLVEMAHGGVDFLD 242
Query: 780 KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAY--FEK 837
+S+ A FE H E L + PKS KS L A Y FEK
Sbjct: 243 ESLLAGWASFETRHREYERARALYTYGLEKLPKS------------KSAKLYADYTAFEK 290
Query: 838 NHGTRESLETLL--------QKAVAHCPKSEVLWL----MGAKSKWLAGDVPAARGILSL 885
+G +E +E ++ + + P W +G +S A + R I
Sbjct: 291 QYGAKEGIENVVLTKRRSKYEDQLKEDPADYDTWFSYITLGQESGLEADQI---REIFER 347
Query: 886 AFQ-ANPNSEEIWLAAVKL--------ESENNEYERARRLLAKARAQAGAFQANPNSEEI 936
A P+S+ +W + L E EN E E+AR + + ++
Sbjct: 348 AVSNVPPHSKRLWRRYIFLWIKYAIWEELENKEVEKAREIYKTCISIIP--HKKFTFAKV 405
Query: 937 WLAAVKLESENNEYERARRLLAKARA-SAPTPRVMIQSAKLEWCLDNLERALQLLDEAIK 995
WL K E + AR++L + S P + LE L +R +L D+ ++
Sbjct: 406 WLLWAKFEIRHGNLPEARKILGRGLGMSGGKPALYKGYIALEAKLREFDRCRKLYDKYVE 465
Query: 996 VFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKMLIK 1053
F +FA WM ++E+ ++A F A+ + +P +W E + +
Sbjct: 466 KFAEFAAPWMEYAELEQMLGDEERARAIFELAVSQPEMEMPELVWKRFIEFEAEEENYDR 525
Query: 1054 ARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKD 1086
AR++ + R ++W++ + E+ +D
Sbjct: 526 ARAIYRQLLDRTHGHIKVWISFAQFEVTVPAED 558
Score = 42.4 bits (98), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 157/420 (37%), Gaps = 62/420 (14%)
Query: 749 WMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVA 808
WM A+ Q + AR+++ +AL + W+R E LL +AV
Sbjct: 69 WMRYAQWELEQREFARARSVFERALEVNSTHVPTWIRYIQCELKEKNINHARNLLDRAVT 128
Query: 809 HCPKSEVLWL--------MGAKSNKKSIWLR-----------AAY--FEKNHGTRESLET 847
P+ + LW +G + ++++ R AAY EK + +
Sbjct: 129 LLPRVDKLWFTYVATEETLGNIAGCRAVFERWMHWRPPVTAWAAYVNMEKRYREFDRARG 188
Query: 848 LLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ---------ANPNSEEIWL 898
+L++ V P + W AK + AG+ R + +L + E +
Sbjct: 189 ILRRYVTVHPGAPA-WNKWAKFEMEAGNRDTVREVYALGIDTLVEMAHGGVDFLDESLLA 247
Query: 899 AAVKLESENNEYERARRLL------------AKARAQAGAFQANPNSEEIWLAAVKLESE 946
E+ + EYERAR L AK A AF+ ++E + V L
Sbjct: 248 GWASFETRHREYERARALYTYGLEKLPKSKSAKLYADYTAFEKQYGAKEG-IENVVLTKR 306
Query: 947 NNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAK---- 1002
++YE + + + + Q + LE ++ ++ + A+ P +K
Sbjct: 307 RSKYEDQLKEDPADYDTWFSYITLGQESGLE-----ADQIREIFERAVSNVPPHSKRLWR 361
Query: 1003 ----LWMMKGQIEEQKNL-LDKAHDTFSQAIKKCPHS----VPLWIMLANLEERRKMLIK 1053
LW+ EE +N ++KA + + I PH +W++ A E R L +
Sbjct: 362 RYIFLWIKYAIWEELENKEVEKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPE 421
Query: 1054 ARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
AR +L +G + L+ I +E + D + K +++ W E LE
Sbjct: 422 ARKILGRGLGMSGGKPALYKGYIALEAKLREFDRCRKLYDKYVEKFAEFAAPWMEYAELE 481
>sp|Q54XP4|CRNL1_DICDI Crooked neck-like protein 1 OS=Dictyostelium discoideum GN=crnkl1
PE=3 SV=1
Length = 705
Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 100/486 (20%), Positives = 190/486 (39%), Gaps = 62/486 (12%)
Query: 496 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKG-CEENQTSEDLWLE 554
D+ +AR + + + + P WI A +E + ARN+ + C + S+ LW +
Sbjct: 90 DLTRARSVFERFLDIDHRIPTVWIKYAEMEMKNKNINLARNIWDRAVCLLPRVSQ-LWFK 148
Query: 555 AARLQPV----DTARAVIAQAVRHIPTSVRIWIKAADLETETKA---KRRVYRKAL---E 604
++ + ARA+ + ++ P + W E K R ++ K +
Sbjct: 149 YTFMEDMLGNYPAARAIFERWMQWKPEP-QAWNSYLKFEQRLKLFENTRLIFEKYILVHP 207
Query: 605 HIPNSVRLWKAAVELEDPEDARILLSRAVECC---PTSVELWLALARLE----TYENARK 657
+I ++ K L + E+AR + RA+E +L++A A+ E E AR
Sbjct: 208 YIKTWIKYTKFEERLGNIENARTIFQRAIEFLGEDGNDEQLFIAFAKFEEKYKEIERARV 267
Query: 658 VLNKARENIPTDR--QIWTTAAKLEEAHGNNAMVDKII---DRALSSLSANGVEINREHW 712
+ A +++P R ++ T E+ HG+ ++ ++ R N + W
Sbjct: 268 IYKYAIDHVPKSRAKDLFDTFTNFEKQHGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIW 327
Query: 713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAY--------EC 764
F E G + + + IG ++KH W N + E
Sbjct: 328 FDYLKMEEINGEIEKTREIYERSIGNLPPTNEKKH-WKRYIYLWINYALFEELISKDMER 386
Query: 765 ARAIYAQALATFPSKK----SIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMG 820
AR++Y++ + P K+ IW+ A FE + + +A+ PKS+
Sbjct: 387 ARSVYSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKARLIYGQAIGRNPKSK------ 440
Query: 821 AKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAAR 880
I+ + + E G + + TL +K + P + W A+ + G+ AR
Sbjct: 441 -------IFDQYIHLEIELGNFDRVRTLYEKYLEIMPDNCDAWCKFAQLETELGETVRAR 493
Query: 881 GILSLAFQANPN---SEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIW 937
I LA Q PN E +W + E + +++ ++L K + N ++W
Sbjct: 494 AIFELAIQ-QPNLDRPEVVWKDFIDSEIQLKQFDFVKQLYRKLLEKT-------NHVKVW 545
Query: 938 LAAVKL 943
+ +K
Sbjct: 546 IGFIKF 551
Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 99/491 (20%), Positives = 182/491 (37%), Gaps = 87/491 (17%)
Query: 652 YENARKVLNKAR----------ENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLS 701
+E ++K L +AR IPT +W A++E + N + I DRA+ L
Sbjct: 84 WEESQKDLTRARSVFERFLDIDHRIPT---VWIKYAEMEMKNKNINLARNIWDRAVCLLP 140
Query: 702 ANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGA 761
+ WFK + G+ RAI ++ + W +
Sbjct: 141 RVS-----QLWFKYTFMEDMLGNYPAA----RAIFERWMQWKPEPQAWNSYLKFEQRLKL 191
Query: 762 YECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGA 821
+E R I+ + + P K+ W++ FE+ G E+ T+ Q+A+ +G
Sbjct: 192 FENTRLIFEKYILVHPYIKT-WIKYTKFEERLGNIENARTIFQRAIE---------FLGE 241
Query: 822 KSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKW--LAGDVPAA 879
N + +++ A FE+ + E + + A+ H PKS L + + GD
Sbjct: 242 DGNDEQLFIAFAKFEEKYKEIERARVIYKYAIDHVPKSRAKDLFDTFTNFEKQHGDRIGI 301
Query: 880 RGIL--SLAFQA------NPNSEEIWLAAVKLESENNEYERARRL--------------- 916
++ FQ N + +IW +K+E N E E+ R +
Sbjct: 302 EDVVLGKKRFQYEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNEKK 361
Query: 917 ----------------------LAKARA-QAGAFQANPNSE----EIWLAAVKLESENNE 949
+ +AR+ + + P+ E +IW+ E
Sbjct: 362 HWKRYIYLWINYALFEELISKDMERARSVYSECIKLIPHKEFSFSKIWILYANFEIRQLN 421
Query: 950 YERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQ 1009
++AR + +A P ++ Q LE L N +R L ++ +++ PD W Q
Sbjct: 422 LDKARLIYGQAIGRNPKSKIFDQYIHLEIELGNFDRVRTLYEKYLEIMPDNCDAWCKFAQ 481
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKMLIKARSVLEKGRLRNPN 1067
+E + +A F AI++ P +W + E + K + + K L N
Sbjct: 482 LETELGETVRARAIFELAIQQPNLDRPEVVWKDFIDSEIQLKQFDFVKQLYRK-LLEKTN 540
Query: 1068 CAELWLAAIRV 1078
++W+ I+
Sbjct: 541 HVKVWIGFIKF 551
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 130/378 (34%), Gaps = 95/378 (25%)
Query: 827 SIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLA 886
++W++ A E + + +AV P+ LW + + G+ PAAR I
Sbjct: 110 TVWIKYAEMEMKNKNINLARNIWDRAVCLLPRVSQLWFKYTFMEDMLGNYPAARAIFERW 169
Query: 887 FQANPNSE--------------------------------EIWLAAVKLESENNEYERAR 914
Q P + + W+ K E E AR
Sbjct: 170 MQWKPEPQAWNSYLKFEQRLKLFENTRLIFEKYILVHPYIKTWIKYTKFEERLGNIENAR 229
Query: 915 RLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPR------ 968
+ +A G + N E++++A K E + E ERAR + A P R
Sbjct: 230 TIFQRAIEFLG---EDGNDEQLFIAFAKFEEKYKEIERARVIYKYAIDHVPKSRAKDLFD 286
Query: 969 ---------------------------------------VMIQSAKLEWCLDNLERALQL 989
+ K+E +E+ ++
Sbjct: 287 TFTNFEKQHGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREI 346
Query: 990 LDEAIKVFP---------DFAKLWMMKGQIEEQKNL-LDKAHDTFSQAIKKCPHS----V 1035
+ +I P + LW+ EE + +++A +S+ IK PH
Sbjct: 347 YERSIGNLPPTNEKKHWKRYIYLWINYALFEELISKDMERARSVYSECIKLIPHKEFSFS 406
Query: 1036 PLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKA 1095
+WI+ AN E R+ L KAR + + RNP ++++ I +EI G D T+ K
Sbjct: 407 KIWILYANFEIRQLNLDKARLIYGQAIGRNPK-SKIFDQYIHLEIELGNFDRVRTLYEKY 465
Query: 1096 LQECPNAGILWAEAIFLE 1113
L+ P+ W + LE
Sbjct: 466 LEIMPDNCDAWCKFAQLE 483
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/430 (18%), Positives = 165/430 (38%), Gaps = 38/430 (8%)
Query: 818 LMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVP 877
L+G +I+++ A +E++ ++ ++ + + +W+ A+ + ++
Sbjct: 67 LLGRNRKTAAIYIKYAAWEESQKDLTRARSVFERFLDIDHRIPTVWIKYAEMEMKNKNIN 126
Query: 878 AARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIW 937
AR I A P ++W +E Y AR + + Q P + W
Sbjct: 127 LARNIWDRAVCLLPRVSQLWFKYTFMEDMLGNYPAARAIFER------WMQWKPEPQA-W 179
Query: 938 LAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVF 997
+ +K E +E R + K P + I+ K E L N+E A + AI+
Sbjct: 180 NSYLKFEQRLKLFENTRLIFEKYILVHPYIKTWIKYTKFEERLGNIENARTIFQRAIEFL 239
Query: 998 PDFA---KLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRK--- 1049
+ +L++ + EE+ +++A + AI P S L+ N E++
Sbjct: 240 GEDGNDEQLFIAFAKFEEKYKEIERARVIYKYAIDHVPKSRAKDLFDTFTNFEKQHGDRI 299
Query: 1050 -----MLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAG- 1103
+L K R E+ +N ++W +++E G + + +++ P
Sbjct: 300 GIEDVVLGKKRFQYEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNE 359
Query: 1104 --------ILWAE-AIFLEPRPQRKTKSVDALKKC-EHDPHVLLAVSKLFWCENKNQKCH 1153
LW A+F E + ++ +C + PH + SK+ W N +
Sbjct: 360 KKHWKRYIYLWINYALFEELISKDMERARSVYSECIKLIPHKEFSFSKI-WILYANFEIR 418
Query: 1154 RSGSRRCMGVKTKSVDALKKCE-HDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLG 1212
+ + + +++ K + D ++ L + + R + + ++I PD
Sbjct: 419 QLNLDKARLIYGQAIGRNPKSKIFDQYIHLEIEL-----GNFDRVRTLYEKYLEIMPDNC 473
Query: 1213 DAWAYFYKFE 1222
DAW F + E
Sbjct: 474 DAWCKFAQLE 483
>sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2
Length = 702
Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 112/519 (21%), Positives = 199/519 (38%), Gaps = 63/519 (12%)
Query: 582 WIKAADLETETKAKRR---VYRKALEHIPNSVRLWKAAVELE----DPEDARILLSRAVE 634
WIK A E + + +R ++ +AL++ +V LW E+E AR L RAV
Sbjct: 79 WIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVT 138
Query: 635 CCPTSVELWLALAR----LETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVD 690
P + W LE AR+V + E P + Q W T E +
Sbjct: 139 IMPRVNQFWYKYTYMEEMLENVAGARQVFERWMEWQPEE-QAWQTYVNFELRYKEIDRAR 197
Query: 691 KIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWM 750
+I +R + V + ++W K A E G +H + + + + + + ++
Sbjct: 198 EIYERFVY------VHPDVKNWIKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLFI 251
Query: 751 EDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAY--FEKNHGTRESLETLLQKAVA 808
A Q ++ AR IY AL P ++ L AY EK +G R +E ++
Sbjct: 252 AFARFEEGQKEHDRARIIYKYALDHLPKDRTQELFKAYTKHEKKYGDRAGIEDVIVSKRK 311
Query: 809 HCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAK 868
+ + EV A W + G R+ + ++A+++ P + K
Sbjct: 312 YQYEQEV----AANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPA------NEK 361
Query: 869 SKWLAGDVPAARGILSLAFQANPNSEEIWL-AAVKLESENNEYERARRLLAKARAQAGAF 927
+ W R + L W+ A+ E E + ER R++
Sbjct: 362 NFW--------RRYIYL-----------WINYALYEELEAEDAERTRQIYK------TCL 396
Query: 928 QANPNSE----EIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNL 983
+ P+ + ++WL + E E +RAR+ L A P ++ LE L
Sbjct: 397 ELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPRDKLFRGYIDLEIQLREF 456
Query: 984 ERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIML 1041
ER L ++ ++ P+ WM ++E D+A F A+++ +P LW
Sbjct: 457 ERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRARAIFELAVQQPRLDMPELLWKAY 516
Query: 1042 ANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEI 1080
+ E AR + E+ L ++W++ + E+
Sbjct: 517 IDFEVALGETELARQLYERL-LERTQHVKVWMSFAKFEM 554
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 118/527 (22%), Positives = 210/527 (39%), Gaps = 90/527 (17%)
Query: 518 WIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQ----PVDTARAVIAQAVR 573
WI A+ EE ++Q AR++ + + + LWL+ A ++ V+ AR + +AV
Sbjct: 79 WIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVT 138
Query: 574 HIPTSVRIWIKAADLE---TETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDAR 626
+P + W K +E R+V+ + +E P + W+ V E + + AR
Sbjct: 139 IMPRVNQFWYKYTYMEEMLENVAGARQVFERWMEWQPEE-QAWQTYVNFELRYKEIDRAR 197
Query: 627 ILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTD---RQIWTTAAKL 679
+ R V P V+ W+ AR E +R+V +A E D +++ A+
Sbjct: 198 EIYERFVYVHP-DVKNWIKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARF 256
Query: 680 EEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYG 739
EE + I AL L + + E KA + H + RA G
Sbjct: 257 EEGQKEHDRARIIYKYALDHLPKDRTQ-----------ELFKAYTKHEKKYGDRA----G 301
Query: 740 VEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESL 799
+E + ++ Y+ Y Q +A P+ W + G R+ +
Sbjct: 302 IE------------DVIVSKRKYQ-----YEQEVAANPTNYDAWFDYLRLIEAEGDRDQI 344
Query: 800 ETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLET--------LLQK 851
++A+++ P +N+K+ W R Y N+ E LE + +
Sbjct: 345 RETYERAISNVP----------PANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKT 394
Query: 852 AVAHCPKSEV----LWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESEN 907
+ P + LWL+ A+ + ++ AR L LA P ++++ + LE +
Sbjct: 395 CLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPR-DKLFRGYIDLEIQL 453
Query: 908 NEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRL--LAKARASAP 965
E+ER R L K + P + W+ +LE+ + +RAR + LA +
Sbjct: 454 REFERCRMLYEK------FLEFGPENCVTWMKFAELENLLGDTDRARAIFELAVQQPRLD 507
Query: 966 TPRVMIQS-AKLEWCLDNLERALQLLD------EAIKVFPDFAKLWM 1005
P ++ ++ E L E A QL + + +KV+ FAK M
Sbjct: 508 MPELLWKAYIDFEVALGETELARQLYERLLERTQHVKVWMSFAKFEM 554
>sp|P87312|CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf4 PE=1 SV=1
Length = 674
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 120/544 (22%), Positives = 210/544 (38%), Gaps = 68/544 (12%)
Query: 565 RAVIAQAVRHIPTSVRIWIKAADLETETKA---KRRVYRKALEHIPNSVRLWKAAVELE- 620
R A+R ++ W++ E + K R V+ +AL+ + LW +E E
Sbjct: 56 RKEFEDAIRRNRLAMGHWMRYGQWELDQKEFARARSVFERALDVDSTYIPLWLKYIECEM 115
Query: 621 ---DPEDARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIW 673
+ AR L RAV P +LW +E R+V + + P D W
Sbjct: 116 KNRNINHARNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVFERWLKWEP-DENCW 174
Query: 674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEA-IEAEKAGSVHTCQALI 732
+ ++E + N I +R + V +W + A E E + + Q +
Sbjct: 175 MSYIRMERRYHENERARGIYERFVV------VHPEVTNWLRWARFEEECGNAANVRQVYL 228
Query: 733 RAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAY--FE 790
AI G E + + ++ A+ Q YE AR I+ A+ P KS+ L Y FE
Sbjct: 229 AAIDALGQEFLNERF-FIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSMELYKEYTHFE 287
Query: 791 KNHGTRESLE-TLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLL 849
K G +E T+L K K L+ WL E++ G ++
Sbjct: 288 KQFGDHLGVESTVLDKRRLQYEK-----LLKDSPYDYDTWLDLLKLEESAGDINTIRETY 342
Query: 850 QKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLES-ENN 908
+KA+A P+ + K+ W R + IWL E +
Sbjct: 343 EKAIAKVPE------VVEKNAW-------RRYVY------------IWLNYCLFEEIDVK 377
Query: 909 EYERARRLLAKARAQAGAFQANPNSE----EIWLAAVKLESENNEYERARRLLAKARASA 964
+ +RAR++ +A + P+ + ++WL E + + AR+ L +A
Sbjct: 378 DVDRARKVYQEA------LKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMC 431
Query: 965 PTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTF 1024
P P++ + E + +R L ++ I P+ W+ +E + D+A +
Sbjct: 432 PKPKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARALY 491
Query: 1025 SQAIKKCPHSVP--LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRA 1082
+ A+ + P +W + E KARS+ ++ LR ++W++ EI A
Sbjct: 492 NLAVNQPILETPELVWKAYIDFEFEEMEYGKARSIYQQL-LRTAPHVKVWISFANFEI-A 549
Query: 1083 GLKD 1086
L+D
Sbjct: 550 HLED 553
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 144/389 (37%), Gaps = 56/389 (14%)
Query: 749 WMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVA 808
WM + +Q + AR+++ +AL + +WL+ E + L +AV
Sbjct: 73 WMRYGQWELDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVT 132
Query: 809 HCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAK 868
P+ + +W + Y E+ G + ++ + P E W+ +
Sbjct: 133 QLPRVD------------KLWYKYVYMEEMLGNITGCRQVFERWLKWEP-DENCWMSYIR 179
Query: 869 SKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQ 928
+ + ARGI +P WL + E E R++ A G
Sbjct: 180 MERRYHENERARGIYERFVVVHPEVTN-WLRWARFEEECGNAANVRQVYLAAIDALGQEF 238
Query: 929 ANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVM------------------ 970
N E ++A K E EYERAR + A P + M
Sbjct: 239 LN---ERFFIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLG 295
Query: 971 IQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKK 1030
++S L+ +R LQ ++ +K P W+ ++EE ++ +T+ +AI K
Sbjct: 296 VESTVLD------KRRLQY-EKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAK 348
Query: 1031 CPHSVP---------LWIMLANLEE-RRKMLIKARSVLEKGRLRNPN----CAELWLAAI 1076
P V +W+ EE K + +AR V ++ P+ A+LWL
Sbjct: 349 VPEVVEKNAWRRYVYIWLNYCLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYA 408
Query: 1077 RVEIRAGLKDIANTMMAKALQECPNAGIL 1105
E+R D+A + +AL CP +
Sbjct: 409 MFELRQRKIDVARKTLGRALGMCPKPKLF 437
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 169/462 (36%), Gaps = 55/462 (11%)
Query: 493 DINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLW 552
D + +AR + + + + + P W+ E + ARNL + + + LW
Sbjct: 82 DQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVTQLPRVDKLW 141
Query: 553 LEAARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVY-RKALE 604
+ ++ + R V + ++ P W+ +E E + R +Y R +
Sbjct: 142 YKYVYMEEMLGNITGCRQVFERWLKWEPDE-NCWMSYIRMERRYHENERARGIYERFVVV 200
Query: 605 H--IPNSVRLWKAAVELEDPEDARILLSRAVECCPTSV---ELWLALARLET----YENA 655
H + N +R + E + + R + A++ ++A A+ E YE A
Sbjct: 201 HPEVTNWLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKEYERA 260
Query: 656 RKVLNKARENIPTDR--QIWTTAAKLEEAHGNNAMVDKII---DRALSSLSANGVEINRE 710
R + A + +P + +++ E+ G++ V+ + R + +
Sbjct: 261 RTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVESTVLDKRRLQYEKLLKDSPYDYD 320
Query: 711 HWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYE------- 763
W E AG ++T + I V + K+ W N +E
Sbjct: 321 TWLDLLKLEESAGDINTIRETYEKAIA-KVPEVVEKNAWRRYVYIWLNYCLFEEIDVKDV 379
Query: 764 -CARAIYAQALATFPSKK----SIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWL 818
AR +Y +AL P KK +WL A FE + L +A+ CPK ++
Sbjct: 380 DRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKPKLF-- 437
Query: 819 MGAKSNKKSIWLRAAYFEKNHGTRE--SLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDV 876
Y E ++ L +K + + P++ WL A + GD
Sbjct: 438 -------------RGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDS 484
Query: 877 PAARGILSLAFQAN--PNSEEIWLAAVKLESENNEYERARRL 916
AR + +LA E +W A + E E EY +AR +
Sbjct: 485 DRARALYNLAVNQPILETPELVWKAYIDFEFEEMEYGKARSI 526
Score = 40.8 bits (94), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 47/104 (45%)
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCA 1069
+EE + + F AI++ ++ W+ E +K +ARSV E+ +
Sbjct: 45 LEELQEFQGRKRKEFEDAIRRNRLAMGHWMRYGQWELDQKEFARARSVFERALDVDSTYI 104
Query: 1070 ELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
LWL I E++ + A + +A+ + P LW + +++E
Sbjct: 105 PLWLKYIECEMKNRNINHARNLFDRAVTQLPRVDKLWYKYVYME 148
>sp|Q6CJK2|CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=CLF1 PE=3 SV=1
Length = 684
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 109/524 (20%), Positives = 185/524 (35%), Gaps = 117/524 (22%)
Query: 593 KAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDARILLSRAVECCPTSVELWLALA- 647
+ KR Y L+ +R W + E D AR + RA+ + LW+
Sbjct: 46 RRKRTEYETVLKRNRLDLRQWMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYID 105
Query: 648 ---RLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANG 704
+ + +AR +L++A +P ++W LEE+ GN +V I R S
Sbjct: 106 SEIKWKNINHARNLLDRATNALPRVDKLWFKYLLLEESLGNQGIVRGIYTRWCS------ 159
Query: 705 VEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYEC 764
E + W +++E C N +E
Sbjct: 160 FEPGPDAW----------------------------------DSFIEFETRCLN---FEN 182
Query: 765 ARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAV------AHCPKSEVLWL 818
R IY++ + P + WL+ FE+ HG S+ T+ A+ + P ++ +
Sbjct: 183 VRNIYSKFVLVHPQIDT-WLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERV 241
Query: 819 MGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPA 878
+G+ A +E + G E TL + AV P SE L
Sbjct: 242 IGS----------FASWEASQGEYERSRTLYRLAVERWPISEAL--------------KE 277
Query: 879 ARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWL 938
+ F ++ N E+I +A K E E +++P W
Sbjct: 278 QQIQFEKKFGSSKNMEDIVIAKRKAEYEQ------------------YLKSDPYHYSTWW 319
Query: 939 AAVKLESENNEYERARRLLAKARASAPTPRVMIQSAK------------LEWCLDNLERA 986
+ L E + + + + P V S K LE +++L
Sbjct: 320 VYIDLVEEKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRICVRYLVYLELTINDLPTI 379
Query: 987 LQLLDEAIKVFPD----FAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLA 1042
+ + + + P F KLW+M + E ++N L KA ++ K P ++
Sbjct: 380 RSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLGKSPKP-KVFKYYI 438
Query: 1043 NLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKD 1086
NLE R K + R + EK NP+ + WL +E G +D
Sbjct: 439 NLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDED 482
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/481 (19%), Positives = 174/481 (36%), Gaps = 114/481 (23%)
Query: 579 VRIWIKAADLETETKAKRR---VYRKAL--EH--IPNSVRLWKAAVELEDPEDARILLSR 631
+R W++ A E + K RR +Y +AL +H IP ++ + ++ ++ AR LL R
Sbjct: 63 LRQWMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDR 122
Query: 632 AVECCPTSVELWLALARLE-------------------------------------TYEN 654
A P +LW LE +EN
Sbjct: 123 ATNALPRVDKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFEN 182
Query: 655 ARKVLNKARENIPTDRQI--WTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHW 712
R + +K + QI W + E+ HG+ + V + AL +L++
Sbjct: 183 VRNIYSKF---VLVHPQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFS-------- 231
Query: 713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQA 772
T I +IG E A+QG YE +R +Y A
Sbjct: 232 -------------GTPLVDIERVIGSFASWE-------------ASQGEYERSRTLYRLA 265
Query: 773 LATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRA 832
+ +P +++ + FEK G+ +++E ++ +A +L + + W+
Sbjct: 266 VERWPISEALKEQQIQFEKKFGSSKNMEDIV---IAKRKAEYEQYLKSDPYHYSTWWVYI 322
Query: 833 AYFEKNHGTRESLETLLQKAVAHC-PKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANP 891
E+ + +E L + Q + PKS V S W R ++ L N
Sbjct: 323 DLVEEKY--QEQLTSAFQSFIELAKPKSLV-----KDSSWKRYIRICVRYLVYLELTIN- 374
Query: 892 NSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYE 951
L + + Y+ ++ + G ++W+ + E N
Sbjct: 375 ----------DLPTIRSVYQDILDIIPHKKFTFG---------KLWIMYAEFEIRQNNLL 415
Query: 952 RARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIE 1011
+AR++L + +P P+V LE L +R +L ++ I P + W+ ++E
Sbjct: 416 KARKILGVSLGKSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELE 475
Query: 1012 E 1012
E
Sbjct: 476 E 476
Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%)
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCA 1069
+EE K+ + + +K+ + W+ A E +K + +ARS+ E+ L +
Sbjct: 38 LEELKDWQRRKRTEYETVLKRNRLDLRQWMRYAQFEFDQKDIRRARSIYERALLVDHGFI 97
Query: 1070 ELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
LW+ I EI+ + A ++ +A P LW + + LE
Sbjct: 98 PLWIQYIDSEIKWKNINHARNLLDRATNALPRVDKLWFKYLLLE 141
Score = 37.4 bits (85), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 1004 WMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRL 1063
WM Q E + + +A + +A+ +PLWI + E + K + AR++L++
Sbjct: 66 WMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATN 125
Query: 1064 RNPNCAELWLAAIRVEIRAGLKDIANTMMAK--ALQECPNAGILWAEAIFLEPR 1115
P +LW + +E G + I + + + + P+A W I E R
Sbjct: 126 ALPRVDKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDA---WDSFIEFETR 176
Score = 34.3 bits (77), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 22/165 (13%)
Query: 764 CARAIYAQALATFPSKK----SIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLM 819
R++Y L P KK +W+ A FE +L ++ PK +V
Sbjct: 378 TIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLGKSPKPKVF--- 434
Query: 820 GAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAA 879
++ +R F++ + L +K + P S WL A+ + GD +
Sbjct: 435 ---KYYINLEIRLKEFDR-------VRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRS 484
Query: 880 RGILSLAFQANPN-SEEIWLAAVK----LESENNEYERARRLLAK 919
RGI ++ N SE L ++ E++ EYE+AR L K
Sbjct: 485 RGIYDISMSNNVGLSESDQLIVIQRYIAFETDAAEYEKARELYEK 529
>sp|Q9FNS4|MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas
reinhardtii GN=MBB1 PE=2 SV=1
Length = 662
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 116/278 (41%), Gaps = 24/278 (8%)
Query: 495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKG---CEENQTSEDL 551
++++AR L + + H AW LE+ G AR+L M+G C S++
Sbjct: 210 GNVERARKLYDAAVVVDGTHACAWHKWGMLEKGQGNFTRARDLWMQGIQRCRRKPQSQNA 269
Query: 552 WLE------AARLQPVDTARAVIAQAVRHI--PTSVRIWIKAADLET---ETKAKRRVYR 600
+L AA+L V AR+ + R SV +W A LE + R ++R
Sbjct: 270 YLYNALGCMAAQLGRVGEARSWFEEGTRSAEGAASVALWQAWAVLEAKQGDPTVVRYLFR 329
Query: 601 KALEHIPNSVRLWKAAVELE----DPEDARILLSRAVECCPTSVELWLALARLET----Y 652
KAL P S + A E +P+ LL R E PT L+ A A +E
Sbjct: 330 KALGANPRSRYVHLAWALWERRQGNPQHCLALLRRGCELNPTDPALYQAWALVEKQAGRI 389
Query: 653 ENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHW 712
E AR++ + P+D +W +E GN ++ + + + + H
Sbjct: 390 ERARELFEQGLRADPSDLYMWQAYGVMEAEQGNMDRARQLFQEGVWADPRSPSTVYVFHA 449
Query: 713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWM 750
+ A+E + AG+V T + L +A + + E +W+
Sbjct: 450 WG-ALEWQ-AGNVQTARELFKAAVRVDPKSETTWASWI 485
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 12/189 (6%)
Query: 933 SEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCL-----DNLERAL 987
S +W A LE++ + R L KA + P R + L W L N + L
Sbjct: 304 SVALWQAWAVLEAKQGDPTVVRYLFRKALGANPRSRYV----HLAWALWERRQGNPQHCL 359
Query: 988 QLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEER 1047
LL ++ P L+ +E+Q +++A + F Q ++ P + +W +E
Sbjct: 360 ALLRRGCELNPTDPALYQAWALVEKQAGRIERARELFEQGLRADPSDLYMWQAYGVMEAE 419
Query: 1048 RKMLIKARSVLEKGRL---RNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGI 1104
+ + +AR + ++G R+P+ ++ A +E +AG A + A++ P +
Sbjct: 420 QGNMDRARQLFQEGVWADPRSPSTVYVFHAWGALEWQAGNVQTARELFKAAVRVDPKSET 479
Query: 1105 LWAEAIFLE 1113
WA I +E
Sbjct: 480 TWASWIAME 488
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 131/350 (37%), Gaps = 59/350 (16%)
Query: 646 LARLETYENARKVLNKARENIP-TDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANG 704
L + + Y+ AR++ N + IW+ LE GN K+ D A
Sbjct: 171 LVQQKRYDEARQLYQDGCANTGNVNPYIWSAWGWLEARTGNVERARKLYDAA-------- 222
Query: 705 VEINREH---WFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESC--ANQ 759
V ++ H W K + + G+ + L I + ++ ++ +A C A
Sbjct: 223 VVVDGTHACAWHKWGMLEKGQGNFTRARDLWMQGIQRCRRKPQSQNAYLYNALGCMAAQL 282
Query: 760 GAYECARAIYAQALATFPSKKSI--WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLW 817
G AR+ + + + S+ W A E G + L +KA+ P+S
Sbjct: 283 GRVGEARSWFEEGTRSAEGAASVALWQAWAVLEAKQGDPTVVRYLFRKALGANPRS---- 338
Query: 818 LMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVP 877
+ + L A +E+ G + LL++ P L+ A + AG +
Sbjct: 339 --------RYVHLAWALWERRQGNPQHCLALLRRGCELNPTDPALYQAWALVEKQAGRIE 390
Query: 878 AARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLL-----AKARA---------- 922
AR + +A+P+ +W A +E+E +RAR+L A R+
Sbjct: 391 RARELFEQGLRADPSDLYMWQAYGVMEAEQGNMDRARQLFQEGVWADPRSPSTVYVFHAW 450
Query: 923 -----QAG-----------AFQANPNSEEIWLAAVKLESENNEYERARRL 956
QAG A + +P SE W + + +ESE E ER L
Sbjct: 451 GALEWQAGNVQTARELFKAAVRVDPKSETTWASWIAMESELGEIERVDEL 500
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 125/347 (36%), Gaps = 39/347 (11%)
Query: 930 NPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAK--LEWCLDNLERAL 987
+P ++ K + Y+ AR+L A+ I SA LE N+ERA
Sbjct: 157 DPADPRAYVVLGKTLVQQKRYDEARQLYQDGCANTGNVNPYIWSAWGWLEARTGNVERAR 216
Query: 988 QLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKC---PHS--VPLWIMLA 1042
+L D A+ V A W G +E+ + +A D + Q I++C P S L+ L
Sbjct: 217 KLYDAAVVVDGTHACAWHKWGMLEKGQGNFTRARDLWMQGIQRCRRKPQSQNAYLYNALG 276
Query: 1043 NLEERRKMLIKARSVLEKGRLRNPNCAE--LWLAAIRVEIRAGLKDIANTMMAKALQECP 1100
+ + + +ARS E+G A LW A +E + G + + KAL P
Sbjct: 277 CMAAQLGRVGEARSWFEEGTRSAEGAASVALWQAWAVLEAKQGDPTVVRYLFRKALGANP 336
Query: 1101 NAGILWAEAIFLEPRPQRKTKSVDALKK-CE---HDPHVLLA-------------VSKLF 1143
+ + E R + L++ CE DP + A +LF
Sbjct: 337 RSRYVHLAWALWERRQGNPQHCLALLRRGCELNPTDPALYQAWALVEKQAGRIERARELF 396
Query: 1144 -------------WCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKLFWC 1190
W + + R + + V A + +V A L W
Sbjct: 397 EQGLRADPSDLYMWQAYGVMEAEQGNMDRARQLFQEGVWADPRSPSTVYVFHAWGALEWQ 456
Query: 1191 ENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKR 1237
Q RE F V++DP WA + E G E E++ R
Sbjct: 457 AGNVQTARELFKAAVRVDPKSETTWASWIAMESELGEIERVDELRIR 503
Score = 34.7 bits (78), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
Query: 503 LLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQP-- 560
LL+ E NP P + A A +E+ G+++ AR L +G + + +W ++
Sbjct: 361 LLRRGCELNPTDPALYQAWALVEKQAGRIERARELFEQGLRADPSDLYMWQAYGVMEAEQ 420
Query: 561 --VDTARAVIAQAV---RHIPTSVRIWIKAADLETE---TKAKRRVYRKALEHIPNSVRL 612
+D AR + + V P++V ++ LE + + R +++ A+ P S
Sbjct: 421 GNMDRARQLFQEGVWADPRSPSTVYVFHAWGALEWQAGNVQTARELFKAAVRVDPKSETT 480
Query: 613 WKAAVELE 620
W + + +E
Sbjct: 481 WASWIAME 488
>sp|Q7SAK5|SYF1_NEUCR Pre-mRNA-splicing factor syf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=syf-1 PE=3 SV=1
Length = 829
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 122/626 (19%), Positives = 234/626 (37%), Gaps = 102/626 (16%)
Query: 511 NPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQ 570
NP W+A + G VQ ++ + C + S LW R +
Sbjct: 31 NPGSTKPWLAYIEYKLQKGTVQEQAYIMERACVQLPRSYKLWKMYLRFR----------- 79
Query: 571 AVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVE--LEDP--EDAR 626
+H+ + AA +E + ++ +AL + R+W+ ++ ++ P R
Sbjct: 80 -TKHVSK-----LNAAIFASEYQKVNSLFERALILLNKMPRIWEMYLKFLMQQPLVTHTR 133
Query: 627 ILLSRAVECCPTSVE-----LWLALARLETYENARKVLNKARENIPTDRQ---------- 671
RA+ P + L+ A E A K+ + + P D +
Sbjct: 134 RTFDRALRALPITQHNRIWALYRPFANSAEGETAVKIWRRYMQVHPEDAEDFIELLVAVG 193
Query: 672 IWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQAL 731
++T A NN + L + V++ EH A + H
Sbjct: 194 LYTEAVHKYIEILNNPRFTSKNSKGHYELWSEMVDLLVEH-------ATAVETGHETGID 246
Query: 732 IRAIIGYGVEQ--EDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYF 789
+ II G+E+ + R W A +G++E AR ++ + + T + + L F
Sbjct: 247 VERIIRSGIERFADQRGKLWCGLATYWIRRGSFERARDVFEEGITTVMTVRDFTL---VF 303
Query: 790 EKNHGTRESL-ETLLQKAVAHCPKSEV---------LWLMGAKS--NKKSIWLRAAYFEK 837
+ ES+ L++ A K EV + +M + +++ L +
Sbjct: 304 DSYTEFEESIISALMEMASTRAEKGEVDEVADFDLDIRMMRFEHLMDRRPFLLNDVLLRQ 363
Query: 838 N---------------HGTRESLETLLQKAVAHCPKSEV-----LWLMGAKSKWLAGDVP 877
N E ++T L A PK V LW AK GD+
Sbjct: 364 NPNNVTEWEKRVALWGDNKEEVVKTYLDAIEAIQPKKAVGALHQLWTNYAKFYEAGGDLS 423
Query: 878 AARGILSLA----FQANPNSEEIWLAAVKLESENNEYERARRLLAKA-----RAQAGAF- 927
+AR I+ A +++ ++W+ ++E N ++ A +++AKA R+ F
Sbjct: 424 SARRIMEKAVKVPYKSVAELADMWIEWAEMELRNECFDEAMKVMAKAVQAPKRSTVDYFD 483
Query: 928 ------QANPNSEEIWLAAVKLESENNEYERARRLLAKA-RASAPTPRVMIQSAKLEWCL 980
Q S ++W V L + + R++ + TP+ ++ A L
Sbjct: 484 ETLSPQQRVHKSWKLWSFYVDLVESVSSLDETRKVYERIFELRIATPQTVVNYANLLEEH 543
Query: 981 DNLERALQLLDEAIKVF--PDFAKLW-MMKGQIEEQKNLLDKAHDTFSQAIKKCP--HSV 1035
E + ++ + + +F P +LW + + ++K +++ D F QA++ CP +
Sbjct: 544 KYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIERLRDLFEQAVEDCPPKFAK 603
Query: 1036 PLWIMLANLEERRKMLIKARSVLEKG 1061
+++M NLEE R + A + E+
Sbjct: 604 VIYLMYGNLEEERGLARHAMRIYERA 629
Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 6/132 (4%)
Query: 769 YAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSI 828
Y Q + P WL ++ GT + ++++A P+S LW M + K +
Sbjct: 24 YEQDIVRNPGSTKPWLAYIEYKLQKGTVQEQAYIMERACVQLPRSYKLWKMYLRFRTKHV 83
Query: 829 W-LRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAF 887
L AA F + + + +L ++A+ K +W M K V R A
Sbjct: 84 SKLNAAIFASEY---QKVNSLFERALILLNKMPRIWEMYLKFLMQQPLVTHTRRTFDRAL 140
Query: 888 QANPNSEE--IW 897
+A P ++ IW
Sbjct: 141 RALPITQHNRIW 152
>sp|Q86UA1|PRP39_HUMAN Pre-mRNA-processing factor 39 OS=Homo sapiens GN=PRPF39 PE=1 SV=3
Length = 669
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 170/479 (35%), Gaps = 108/479 (22%)
Query: 564 ARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLW------- 613
AR + H P W K ADLE K VYR+ L+ IP SV LW
Sbjct: 114 ARKAFDRFFIHYPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFL 173
Query: 614 KAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIW 673
K ++ DPE + T+E+A VL A + +DR +W
Sbjct: 174 KETLDPGDPETNNTIRG--------------------TFEHA--VL-AAGTDFRSDR-LW 209
Query: 674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHW--FKEAIEAEKAGSVHTCQAL 731
E GN V I DR L ++ H+ FKE ++ + T +
Sbjct: 210 EMYINWENEQGNLREVTAIYDRILGI----PTQLYSHHFQRFKEHVQNNLPRDLLTGEQF 265
Query: 732 IR------AIIGY-------------GVEQ-----------EDRKHTWMEDAESCANQGA 761
I+ ++ G+ G+E E+ +H +E + N
Sbjct: 266 IQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKLITEIENMRHRIIEIHQEMFNYNE 325
Query: 762 YECAR------AIYAQALATFPSKKSI---WLRAAYFEKNHGTRESLETLLQKAVAHCPK 812
+E ++ I P +K+ W FE +GT E + L ++ V C
Sbjct: 326 HEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGTHERVVVLFERCVISCAL 385
Query: 813 SEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWL 872
E W+ AK + +NH + H PK ++ ++ A +
Sbjct: 386 YEEFWIKYAK------------YMENHSIEGVRHVFSRACTIHLPKKPMVHMLWAAFEEQ 433
Query: 873 AGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPN 932
G++ AR IL + + L V LE + E A LL A A +
Sbjct: 434 QGNINEARNILKTFEECVLGLAMVRLRRVSLERRHGNLEEAEHLLQDAIKNAKS------ 487
Query: 933 SEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLD 991
+ E AVKL AR L K + + P R ++ A +E +N + L LL+
Sbjct: 488 NNESSFYAVKL---------ARHLF-KIQKNLPKSRKVLLEA-IERDKENTKLYLNLLE 535
>sp|Q52DF3|SYF1_MAGO7 Pre-mRNA-splicing factor SYF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=SYF1 PE=3 SV=2
Length = 832
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 29/258 (11%)
Query: 831 RAAYFEKNHGTRESLETLLQKAVAHCPKS-----EVLWLMGAKSKWLAGDVPAARGILSL 885
R A + NH E + T A PK LW AK GD+ +AR I+
Sbjct: 377 RVALWGDNHN--EVVNTYTNAIAAVQPKKASGPFHQLWANYAKFYERGGDLRSARIIMEK 434
Query: 886 A----FQANPNSEEIWLAAVKLESENNEYERARRLLAKA-----RAQAGAF-------QA 929
A F++ ++W+ ++E N+ +E A R++AKA R+ F Q
Sbjct: 435 AVKVPFKSVVELADMWIEWAEMELRNDNFEEAVRIMAKAVQAPKRSTVDYFDETLTPQQR 494
Query: 930 NPNSEEIWLAAVKLESENNEYERARRLLAKA-RASAPTPRVMIQSAKLEWCLDNLERALQ 988
S ++W V L E +++ + TP+ ++ A L E + +
Sbjct: 495 VHKSWKLWSFYVDLVESVGTLEDTKKVYERIFELRIATPQTVVNYANLLEEHKYYEESFK 554
Query: 989 LLDEAIKVF--PDFAKLW-MMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLAN 1043
+ + + +F P +LW M + ++K +++ D F QA++ CP +++M N
Sbjct: 555 IYERGLDLFSYPVAFELWNMYLTKAVDRKISIERLRDLFEQAVEGCPPKFAKIIYLMYGN 614
Query: 1044 LEERRKMLIKARSVLEKG 1061
LEE R + A + E+
Sbjct: 615 LEEERGLARHAMRIYERA 632
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 6/133 (4%)
Query: 768 IYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKS 827
+Y Q + P WL ++ HGT E +L++A P+S LW M K
Sbjct: 26 VYEQDIQRSPGSTKPWLAYISYKIQHGTVEEQAFVLERACMQLPRSYKLWKMYLTFRTKH 85
Query: 828 IW-LRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLA 886
I L AA F + + +L ++A+ K +W M K V R A
Sbjct: 86 IAKLNAAIFAAEY---RKVNSLFERALILLNKMPRIWEMYLKFLMKQPLVTLTRRTFDRA 142
Query: 887 FQANPNSEE--IW 897
+A P ++ IW
Sbjct: 143 LRALPITQHNRIW 155
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 173/433 (39%), Gaps = 64/433 (14%)
Query: 424 GLMSQIPGT-ATPGMLTPSGDLDLRKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTD 482
G M ++ G A G++ + D DL LM+ + ++D ++ Q +P + +
Sbjct: 318 GAMMEVAGQRAEKGVVDEAADFDLDIRMMRFEHLMDRRPFLLNDVLLRQ---NPNN-VNE 373
Query: 483 LQSMIPTYGGD----INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLI 538
+ + +G + +N A ++ + + P H W A+ E G +++AR ++
Sbjct: 374 WEKRVALWGDNHNEVVNTYTNAIAAVQPKKASGPFHQ-LWANYAKFYERGGDLRSARIIM 432
Query: 539 MKGCEENQTS----EDLWLEAARLQ----PVDTARAVIAQAVR----------------- 573
K + S D+W+E A ++ + A ++A+AV+
Sbjct: 433 EKAVKVPFKSVVELADMWIEWAEMELRNDNFEEAVRIMAKAVQAPKRSTVDYFDETLTPQ 492
Query: 574 -HIPTSVRIWIKAADLETETKA---KRRVYRKALE---HIPNSVRLWKAAVELEDP-EDA 625
+ S ++W DL ++VY + E P +V + +E E++
Sbjct: 493 QRVHKSWKLWSFYVDLVESVGTLEDTKKVYERIFELRIATPQTVVNYANLLEEHKYYEES 552
Query: 626 RILLSRAVECC--PTSVELW-----LALARLETYENARKVLNKARENIPTD--RQIWTTA 676
+ R ++ P + ELW A+ R + E R + +A E P + I+
Sbjct: 553 FKIYERGLDLFSYPVAFELWNMYLTKAVDRKISIERLRDLFEQAVEGCPPKFAKIIYLMY 612
Query: 677 AKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAI--EAEKAGSVHTCQALIRA 734
LEE G +I +RA ++S +R F I A G T Q RA
Sbjct: 613 GNLEEERGLARHAMRIYERATRAVSDE----DRADMFNFYITKSASNFGLPSTRQIYERA 668
Query: 735 IIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKS---IWLRAAYFEK 791
I + ++ + ++ A+ G + ARAIY A + F ++ W + FE
Sbjct: 669 IAA--LPDDEARDMCLKFADMEKRLGEIDRARAIYGHA-SQFCDPRTTPAFWTKWEQFEV 725
Query: 792 NHGTRESLETLLQ 804
HG ++ + +L+
Sbjct: 726 QHGNEDTFKEMLR 738
>sp|Q5AED6|CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CLF1 PE=3 SV=2
Length = 758
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 978 WCLDN---LERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHS 1034
W ++N RA +L+ A+ V W+ Q+E ++ A + +AI P
Sbjct: 129 WEIENNHDFPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLPRV 188
Query: 1035 VPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAK 1094
LW + EE K R+V E+ +P+ + +W A I E R K+ T+ K
Sbjct: 189 NKLWFLYVQTEEMLKNYPMVRAVFERWLDWHPDTS-VWDAYINFEARYEEKENVRTIFKK 247
Query: 1095 ALQECPNAGILWAEAIFLEPRPQR 1118
+ E PNAG W + I E R
Sbjct: 248 YVHEFPNAGT-WYKWIKYEMENNR 270
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 29/171 (16%)
Query: 783 WLRAAYFE--KNHG---TRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEK 837
W R A +E NH R LE L + H P W++ E
Sbjct: 123 WTRYAKWEIENNHDFPRARSILERALDVNIQHVP----------------FWIQYIQLEL 166
Query: 838 NHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIW 897
+H L+++A+ P+ LW + +++ + + P R + +P++ +W
Sbjct: 167 SHKNINHARNLMERAINTLPRVNKLWFLYVQTEEMLKNYPMVRAVFERWLDWHPDT-SVW 225
Query: 898 LAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENN 948
A + E+ E E R + K + PN+ W +K E ENN
Sbjct: 226 DAYINFEARYEEKENVRTIFKKYVHEF------PNA-GTWYKWIKYEMENN 269
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 88/447 (19%), Positives = 163/447 (36%), Gaps = 67/447 (14%)
Query: 563 TARAVIAQAVRHIPTSVRIWIKAADLETETKAK----RRVYRKALEHIPNSVRLWKAAVE 618
T R Q + ++ W + A E E R + +AL+ V W ++
Sbjct: 104 TKRKEFEQHINKNRLNLGQWTRYAKWEIENNHDFPRARSILERALDVNIQHVPFWIQYIQ 163
Query: 619 LE----DPEDARILLSRAVECCPTSVELWLALAR----LETYENARKVLNKARENIPTDR 670
LE + AR L+ RA+ P +LW + L+ Y R V + + P D
Sbjct: 164 LELSHKNINHARNLMERAINTLPRVNKLWFLYVQTEEMLKNYPMVRAVFERWLDWHP-DT 222
Query: 671 QIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQA 730
+W E + V I + + G W K +E + V+T +A
Sbjct: 223 SVWDAYINFEARYEEKENVRTIFKKYVHEFPNAGTWYK---WIKYEMENNR-DDVNTVRA 278
Query: 731 LIRAIIGYGVEQEDRKH-----------TWMEDAESCANQGAYECARAIYAQAL------ 773
+ + + + + ++ +W SC G A I+ L
Sbjct: 279 VFESAVDTLLSNKSEENDDDEEFATIISSWTSWEVSC---GEASRANEIFKLLLDNKTNK 335
Query: 774 --ATFPSKKSIWLRAAYFEKNHGTRESLE--TLLQKAVAHCPKSEVLWLMGAKSNKKSIW 829
+ +K SI+ FEKN G ++S+E L+++ + + + + W
Sbjct: 336 LEISDKTKSSIYTAFVEFEKNFGNKDSIEQSVLIKRRIKYEQE------IQNDPYDYDSW 389
Query: 830 LRAAYFEKNHGTRESLETLLQKA---VAHCPKSEV-------LWLMGAKSKWLAGDVP-A 878
+ +N + LE +K V H + W+ A + + + P +
Sbjct: 390 WKYMTLLQNSSNKSDLENAFKKVTGNVVHDKHKSIKWRRYIMFWIWYAFWEEMTNNNPDS 449
Query: 879 ARGILSLAFQANPNSE----EIWLAAVKLESENNE--YERARRLLAKARAQAGAFQANPN 932
AR I + + P+ ++W+ + E N+E +AR++L +A Q N
Sbjct: 450 AREIWNNCLKVIPHKSFTFAKVWIGYSEFELRNSEDGLAKARKILGRAIGQTS---INKP 506
Query: 933 SEEIWLAAVKLESENNEYERARRLLAK 959
+I+ + LE + ++ R R L K
Sbjct: 507 KIKIFKYYIDLEKKLGDWNRVRLLFQK 533
Score = 40.4 bits (93), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 121/575 (21%), Positives = 205/575 (35%), Gaps = 107/575 (18%)
Query: 495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
+D +AR +L+ + N H P WI +LE + ARNL+ + LW
Sbjct: 135 HDFPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLPRVNKLWFL 194
Query: 555 AAR----LQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAK---RRVYRKALEHIP 607
+ L+ RAV + + P + +W + E + K R +++K + P
Sbjct: 195 YVQTEEMLKNYPMVRAVFERWLDWHPDT-SVWDAYINFEARYEEKENVRTIFKKYVHEFP 253
Query: 608 NSVRLWK-AAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVL--NKARE 664
N+ +K E+E+ D + RAV +E+A L NK+ E
Sbjct: 254 NAGTWYKWIKYEMENNRDD-VNTVRAV------------------FESAVDTLLSNKSEE 294
Query: 665 N-----IPTDRQIWTT-AAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIE 718
N T WT+ EA N + ++D + L I
Sbjct: 295 NDDDEEFATIISSWTSWEVSCGEASRANEIFKLLLDNKTNKLE---------------IS 339
Query: 719 AEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPS 778
+ S++T A + +G + Q R Y Q + P
Sbjct: 340 DKTKSSIYT--AFVEFEKNFG-------------NKDSIEQSVLIKRRIKYEQEIQNDPY 384
Query: 779 KKSIWLRAAYFEKNHGTRESLETLLQKA---VAHCPKSEVLWLMGAKSNKKSIWLRAAYF 835
W + +N + LE +K V H + W W+ A++
Sbjct: 385 DYDSWWKYMTLLQNSSNKSDLENAFKKVTGNVVHDKHKSIKWRRYI-----MFWIWYAFW 439
Query: 836 EK-NHGTRESLETLLQKAVAHCPKSEV----LWLMGAKSKWLAGD--VPAARGILSLAF- 887
E+ + +S + + P +W+ ++ + + + AR IL A
Sbjct: 440 EEMTNNNPDSAREIWNNCLKVIPHKSFTFAKVWIGYSEFELRNSEDGLAKARKILGRAIG 499
Query: 888 --QANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLES 945
N +I+ + LE + ++ R R L K + +SE + V+ ES
Sbjct: 500 QTSINKPKIKIFKYYIDLEKKLGDWNRVRLLFQKWL--EVSLLTTSSSELVIEKYVEFES 557
Query: 946 ENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWM 1005
EY+R +L+ AR + P S+ NL+R L++ E F K M
Sbjct: 558 SIEEYDRCDSILSSARQLSENPEY---SSSF-----NLQRLLEITVE-------FYKEEM 602
Query: 1006 MKGQIEE-QKNLLDK---AHDTFSQAIKKCPHSVP 1036
+I E + LLDK AH+ S A+ S+P
Sbjct: 603 QYDKIREIYRALLDKDPNAHNWISFAL--FESSIP 635
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 1024 FSQAIKKCPHSVPLWIMLANLE-ERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRA 1082
F Q I K ++ W A E E +ARS+LE+ N W+ I++E+
Sbjct: 109 FEQHINKNRLNLGQWTRYAKWEIENNHDFPRARSILERALDVNIQHVPFWIQYIQLELSH 168
Query: 1083 GLKDIANTMMAKALQECPNAGILW 1106
+ A +M +A+ P LW
Sbjct: 169 KNINHARNLMERAINTLPRVNKLW 192
>sp|O74835|RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rrp5 PE=1 SV=1
Length = 1690
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 98/235 (41%), Gaps = 28/235 (11%)
Query: 749 WMEDAESCANQGAYECARAIYAQALATF-----PSKKSIWLRAAYFEKNHGTRESLETLL 803
W+ N + AR + +AL+T K ++W+ E +GT +SL+ +
Sbjct: 1443 WISYMAYHLNLNELQEAREVGKRALSTINYREEDEKLNVWMALLNLEVAYGTEDSLKEVF 1502
Query: 804 QKAVAHCPKSEV------LWLMGAKSNKK---------------SIWLRAAYFEKNHGTR 842
++A A+C V + + G K + S+W++ A F N+
Sbjct: 1503 KEACAYCDALIVYEKLCGILIKGGKVDLADEYMQLMLKNFKQVPSVWIQYATFLLNNDKA 1562
Query: 843 ESLETLLQKAVAHCPKSEVLWLM--GAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAA 900
E LL++++ PKSE + ++ A ++ GD R I + P ++W
Sbjct: 1563 EKAHGLLERSLQSLPKSEHVGIIEKFAILEFKNGDPERGRTIFEGLLSSYPKRLDLWNVL 1622
Query: 901 VKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARR 955
+ +E + ++ RRL + A + + + + WLA K ++ E+ +R
Sbjct: 1623 IDMEMKQDDPSIVRRLFQRLLALNLSTKKAKFAFKKWLAYEKNIGDDEGAEQVKR 1677
Score = 37.0 bits (84), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 24/147 (16%)
Query: 730 ALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYE--CARAI----------YAQ-ALATF 776
AL+ + YG E + K + E C YE C I Y Q L F
Sbjct: 1484 ALLNLEVAYGTE-DSLKEVFKEACAYCDALIVYEKLCGILIKGGKVDLADEYMQLMLKNF 1542
Query: 777 PSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFE 836
S+W++ A F N+ E LL++++ PKSE + ++ + A E
Sbjct: 1543 KQVPSVWIQYATFLLNNDKAEKAHGLLERSLQSLPKSEHVGIIE----------KFAILE 1592
Query: 837 KNHGTRESLETLLQKAVAHCPKSEVLW 863
+G E T+ + ++ PK LW
Sbjct: 1593 FKNGDPERGRTIFEGLLSSYPKRLDLW 1619
>sp|Q750X3|CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CLF1 PE=3 SV=1
Length = 683
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 100/481 (20%), Positives = 179/481 (37%), Gaps = 62/481 (12%)
Query: 565 RAVIAQAVRHIPTSVRIWIKAADLETETKAKRR---VYRKALEHIPNSVRLWKAAVELE- 620
R+ +A++ VR W++ A E E + RR V+ +AL P V +W V+ E
Sbjct: 46 RSEFEEALKRNRLDVRQWLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDCEL 105
Query: 621 ---DPEDARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIW 673
D AR LL RA P +LW +E E R V K P W
Sbjct: 106 RARDVNHARNLLVRATALLPRVDKLWYKYVLMEESLGQVELVRGVYTKWCTLEPA-AAAW 164
Query: 674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQAL-- 731
E G V ++ R + + V W + AG+V +L
Sbjct: 165 DAFVDFETRQGQVEHVREVYSR---YVMVHPVAATWLKWVAFERKHGDAGTVRRVYSLAC 221
Query: 732 --IRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYF 789
+ A G V + + + AE A Q E +RA+ + A++ +P ++ A
Sbjct: 222 DTLTAFAGADVHEVE--QLVVSFAEWEATQQELERSRAVLSVAVSRWPESSTLKDATAQL 279
Query: 790 EKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLL 849
EK G + E++L K + L+ + + WL E++
Sbjct: 280 EKKFGGARAGESILFKRKREYEEQ----LLAHPLDYDAWWLYLDLLEESFPAELRAALAE 335
Query: 850 Q--KAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESEN 907
KAV + ++ W R ++L + ++L V ++S+
Sbjct: 336 ATVKAVPRSQEKDMQW----------------RKYVNLWLRYL-----LFLETVLVDSD- 373
Query: 908 NEYERARRLLAKARAQAGAFQANPNSE----EIWLAAVKLESENNEYERARRLLAKARAS 963
L ++ Q + PN++ + W+ + E + ++AR++L +
Sbjct: 374 ---------LTRSMYQKLVREVIPNTKFTFAKAWIMYAEFEIRQEKLDKARKILGMSLGM 424
Query: 964 APTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDT 1023
P P++ LE L +R +L ++ ++ PD W+ ++EE D+A
Sbjct: 425 CPKPKLFQYYIDLEIKLKEFDRVRRLHEKLLEFQPDVLSNWIEYAELEENLGDEDRARGI 484
Query: 1024 F 1024
+
Sbjct: 485 Y 485
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCA 1069
+EE ++ + F +A+K+ V W+ A E ++ + +ARSV E+ P
Sbjct: 35 VEELRDWQRRKRSEFEEALKRNRLDVRQWLRYAAFEYEQRDMRRARSVFERALAVAPGDV 94
Query: 1070 ELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
+WL + E+RA + A ++ +A P LW + + +E
Sbjct: 95 VVWLRYVDCELRARDVNHARNLLVRATALLPRVDKLWYKYVLME 138
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 97/259 (37%), Gaps = 22/259 (8%)
Query: 829 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ 888
WLR A FE ++ ++A+A P V+WL + A DV AR +L A
Sbjct: 63 WLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDCELRARDVNHARNLLVRATA 122
Query: 889 ANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENN 948
P +++W V +E + E R + K A A W A V E+
Sbjct: 123 LLPRVDKLWYKYVLMEESLGQVELVRGVYTKWCTLEPAAAA-------WDAFVDFETRQG 175
Query: 949 EYERARRLLAKARASAPTPRVMIQSAKLE---WCLDNLERALQLLDEAIKVFP-----DF 1000
+ E R + ++ P ++ E + R L + + F +
Sbjct: 176 QVEHVREVYSRYVMVHPVAATWLKWVAFERKHGDAGTVRRVYSLACDTLTAFAGADVHEV 235
Query: 1001 AKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEER-------RKMLIK 1053
+L + + E + L+++ S A+ + P S L A LE++ +L K
Sbjct: 236 EQLVVSFAEWEATQQELERSRAVLSVAVSRWPESSTLKDATAQLEKKFGGARAGESILFK 295
Query: 1054 ARSVLEKGRLRNPNCAELW 1072
+ E+ L +P + W
Sbjct: 296 RKREYEEQLLAHPLDYDAW 314
Score = 42.0 bits (97), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 134/367 (36%), Gaps = 49/367 (13%)
Query: 760 GAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLM 819
G E R +Y + P+ + W FE G E + + + V P +
Sbjct: 142 GQVELVRGVYTKWCTLEPAAAA-WDAFVDFETRQGQVEHVREVYSRYVMVHPVA------ 194
Query: 820 GAKSNKKSIWLRAAYFEKNHGTRESLETLLQ------KAVAHCPKSEVLWLMGAKSKWLA 873
+ WL+ FE+ HG ++ + A A EV L+ + ++W A
Sbjct: 195 -------ATWLKWVAFERKHGDAGTVRRVYSLACDTLTAFAGADVHEVEQLVVSFAEWEA 247
Query: 874 G--DVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAK-ARAQAGAFQAN 930
++ +R +LS+A P S + A +LE + +L K R A+
Sbjct: 248 TQQELERSRAVLSVAVSRWPESSTLKDATAQLEKKFGGARAGESILFKRKREYEEQLLAH 307
Query: 931 PNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEW--CLDNLERALQ 988
P + W + L E+ + R PR Q ++W ++ R L
Sbjct: 308 PLDYDAWWLYLDLLEES--FPAELRAALAEATVKAVPRS--QEKDMQWRKYVNLWLRYLL 363
Query: 989 LLDEAI---------------KVFPD----FAKLWMMKGQIEEQKNLLDKAHDTFSQAIK 1029
L+ + +V P+ FAK W+M + E ++ LDKA ++
Sbjct: 364 FLETVLVDSDLTRSMYQKLVREVIPNTKFTFAKAWIMYAEFEIRQEKLDKARKILGMSLG 423
Query: 1030 KCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIAN 1089
CP L+ +LE + K + R + EK P+ W+ +E G +D A
Sbjct: 424 MCPKP-KLFQYYIDLEIKLKEFDRVRRLHEKLLEFQPDVLSNWIEYAELEENLGDEDRAR 482
Query: 1090 TMMAKAL 1096
+ L
Sbjct: 483 GIYEIGL 489
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 139/387 (35%), Gaps = 48/387 (12%)
Query: 749 WMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVA 808
W+ A Q AR+++ +ALA P +WLR E LL +A A
Sbjct: 63 WLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDCELRARDVNHARNLLVRATA 122
Query: 809 HCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAK 868
P+ + +W + E++ G E + + K P + W
Sbjct: 123 LLPRVD------------KLWYKYVLMEESLGQVELVRGVYTKWCTLEPAAAA-WDAFVD 169
Query: 869 SKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQ 928
+ G V R + S +P + WL V E ++ + RR+ + A AF
Sbjct: 170 FETRQGQVEHVREVYSRYVMVHPVAA-TWLKWVAFERKHGDAGTVRRVYSLACDTLTAFA 228
Query: 929 ANP--NSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQ-SAKLEWCLDNLER 985
E++ ++ + E+ E ER+R +L+ A + P + +A+LE
Sbjct: 229 GADVHEVEQLVVSFAEWEATQQELERSRAVLSVAVSRWPESSTLKDATAQLEKKFGGARA 288
Query: 986 ALQLL-------DEAIKVFP-DFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHS--- 1034
+L +E + P D+ W+ +EE +A +K P S
Sbjct: 289 GESILFKRKREYEEQLLAHPLDYDAWWLYLDLLEESFPAELRAALA-EATVKAVPRSQEK 347
Query: 1035 -------VPLWI--------MLANLEERRKMLIK-ARSVLEKGRLRNPNCAELWLAAIRV 1078
V LW+ +L + + R M K R V+ + A+ W+
Sbjct: 348 DMQWRKYVNLWLRYLLFLETVLVDSDLTRSMYQKLVREVIPNTKF---TFAKAWIMYAEF 404
Query: 1079 EIRAGLKDIANTMMAKALQECPNAGIL 1105
EIR D A ++ +L CP +
Sbjct: 405 EIRQEKLDKARKILGMSLGMCPKPKLF 431
Score = 35.0 bits (79), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Query: 1004 WMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRL 1063
W+ E ++ + +A F +A+ P V +W+ + E R + + AR++L +
Sbjct: 63 WLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDCELRARDVNHARNLLVRATA 122
Query: 1064 RNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPR 1115
P +LW + +E G ++ + K P A W + E R
Sbjct: 123 LLPRVDKLWYKYVLMEESLGQVELVRGVYTKWCTLEPAAAA-WDAFVDFETR 173
>sp|Q5BH69|SYF1_EMENI Pre-mRNA-splicing factor syf1 OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=syf1 PE=3
SV=1
Length = 851
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 27/246 (10%)
Query: 843 ESLETLLQKAVAHCPKSEV-----LWLMGAKSKWLAGDVPAARGILSLA----FQANPNS 893
E + T A PK V LW+ AK GD+ AR I A F++
Sbjct: 398 EIVNTYTAAIAAINPKKAVGKFSELWVNYAKFYERGGDLDTARIIFEKAVKVPFKSVNEL 457
Query: 894 EEIWLAAVKLESENNEYERARRLLAKA-----RAQAGAF-------QANPNSEEIWLAAV 941
E W ++E + +++A ++AKA ++ F Q S ++W V
Sbjct: 458 AETWCEWAEMELRSENFDKAVEIMAKATQAPKKSTVDYFDETLSPQQRIHKSWKLWSFYV 517
Query: 942 KLESENNEYERARRLLAKA-RASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVF--P 998
L + E +++ + TP+ ++ A L E + ++ + + +F P
Sbjct: 518 DLVESVSSIEETKKVYERIFELRIATPQTVVNYANLLEEHKYFEESFKVYERGLDLFTYP 577
Query: 999 DFAKLW-MMKGQIEEQKNLLDKAHDTFSQAIKKCP--HSVPLWIMLANLEERRKMLIKAR 1055
+LW + + ++K +++ D F QA+ CP + PL++M NLEE R + A
Sbjct: 578 VAFELWNLYLTKAVDRKIGIERLRDLFEQALDGCPPKFARPLYLMYGNLEEERGLARHAM 637
Query: 1056 SVLEKG 1061
+ E+
Sbjct: 638 RIYERA 643
>sp|Q4WVF4|SYF1_ASPFU Pre-mRNA-splicing factor syf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=syf1 PE=3
SV=1
Length = 839
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 23/230 (10%)
Query: 854 AHCPKSEVLWLMGAKSKWLAGDVPAARGILSLA----FQANPNSEEIWLAAVKLESENNE 909
AH SE LW+ AK GD+ AR I A F++ + W ++E +
Sbjct: 398 AHGKFSE-LWVNYAKFYESGGDLDTARVIFDKAVKVPFKSVAELADTWCEWAEMELRSEN 456
Query: 910 YERARRLLAKA-----RAQAGAF-------QANPNSEEIWLAAVKLESENNEYERARRLL 957
+++A ++AKA ++ F Q S ++W V L E R++
Sbjct: 457 FDKAVDIMAKATQAPKKSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVATLEETRKVY 516
Query: 958 AKA-RASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVF--PDFAKLW-MMKGQIEEQ 1013
+ TP+ ++ A L E + ++ + + +F P +LW + + ++
Sbjct: 517 ERIFELRIATPQTVVNYANLLEEHKYFEDSFKVYERGLDLFSYPVAFELWNLYLTKAVDR 576
Query: 1014 KNLLDKAHDTFSQAIKKCP--HSVPLWIMLANLEERRKMLIKARSVLEKG 1061
K +++ D F QA+ CP + PL++M NLEE R + A + E+
Sbjct: 577 KIGIERLRDLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRIYERA 626
>sp|Q12309|CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLF1 PE=1 SV=1
Length = 687
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 176/473 (37%), Gaps = 68/473 (14%)
Query: 582 WIKAADLETETKAKRR---VYRKAL----EHIPNSVRLWKAAVELEDPEDARILLSRAVE 634
WI+ A E E RR ++ +AL IP +R A ++++ AR L++RA+
Sbjct: 68 WIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAIS 127
Query: 635 CCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIID 694
P +LW ++ ++ N+ R ++T LE G NA + +D
Sbjct: 128 TLPRVDKLWYKYL----------IVEESLNNVEIVRSLYTKWCSLEP--GVNAW-NSFVD 174
Query: 695 RALSSLSANGV-EINREH---------WFKEAIEAEKAGSVHTCQALIRAIIGYGVEQED 744
+ + NGV EI ++ W K + G+ +++ I V
Sbjct: 175 FEIRQKNWNGVREIYSKYVMAHPQMQTWLKWVRFENRHGNTEFTRSVYSLAID-TVANLQ 233
Query: 745 RKHTW--MEDAESC-------ANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGT 795
W ME A+ A Q YE + A+Y A+ +PS + + FEK G
Sbjct: 234 NLQIWSDMEVAKLVNSFAHWEAAQQEYERSSALYQIAIEKWPSNQLLKAGLLDFEKQFGD 293
Query: 796 RESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAH 855
S+E + +++ K E ++ + W ++ ++T + V
Sbjct: 294 INSIE----ETISYKRKMEYETILSNNAYDYDTWWLYLDLISESFPKQIMQTFEKAIVDS 349
Query: 856 CPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARR 915
PK L+ +V R I +W+ + E
Sbjct: 350 RPKE------------LSKNVQWKRYIY------------LWMRYICYVELELENSLLEE 385
Query: 916 LLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAK 975
L + + +IWL K +++ +AR++L KA P + +
Sbjct: 386 ELFQRLIDDIIPHKHFTFSKIWLMYAKFLIRHDDVPKARKILGKAIGLCPKAKTFKGYIE 445
Query: 976 LEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAI 1028
LE L +R ++ ++ I+ P ++W G++EE D+ ++ A+
Sbjct: 446 LEVKLKEFDRVRKIYEKFIEFQPSDLQIWSQYGELEENLGDWDRVRGIYTIAL 498
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 104/513 (20%), Positives = 190/513 (37%), Gaps = 77/513 (15%)
Query: 495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
+D+++AR + + + + P WI E + ARNL+ + + LW +
Sbjct: 79 HDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAISTLPRVDKLWYK 138
Query: 555 AA----RLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETK---AKRRVYRKALEHIP 607
L V+ R++ + P V W D E K R +Y K + P
Sbjct: 139 YLIVEESLNNVEIVRSLYTKWCSLEP-GVNAWNSFVDFEIRQKNWNGVREIYSKYVMAHP 197
Query: 608 NSVRLWKAAVELED----PEDARILLSRAVECCPT--SVELW--LALARL---------- 649
++ W V E+ E R + S A++ ++++W + +A+L
Sbjct: 198 Q-MQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEVAKLVNSFAHWEAA 256
Query: 650 -ETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIID--RAL---SSLSAN 703
+ YE + + A E P+++ + E+ G+ +++ I R + + LS N
Sbjct: 257 QQEYERSSALYQIAIEKWPSNQLLKAGLLDFEKQFGDINSIEETISYKRKMEYETILSNN 316
Query: 704 GVEINREHWFKEAIEAEKAGSVHTCQALIRAII-------GYGVEQEDRKHTWMEDAESC 756
+ + W+ ++ Q +AI+ V+ + + WM
Sbjct: 317 AYDYDT--WWLYLDLISESFPKQIMQTFEKAIVDSRPKELSKNVQWKRYIYLWMRYICYV 374
Query: 757 ANQGAYECARAIYAQALA--TFPSK----KSIWLRAAYFEKNHGTRESLETLLQKAVAHC 810
+ Q L P K IWL A F H +L KA+ C
Sbjct: 375 ELELENSLLEEELFQRLIDDIIPHKHFTFSKIWLMYAKFLIRHDDVPKARKILGKAIGLC 434
Query: 811 PKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSK 870
PK AK+ K I L E + + + +K + P +W + +
Sbjct: 435 PK--------AKTFKGYIELEVKLKEFDR-----VRKIYEKFIEFQPSDLQIWSQYGELE 481
Query: 871 WLAGDVPAARGILSLAFQANPN----SEEIWLA--AVKLESENNEYERARRLLAK----- 919
GD RGI ++A N + +I L + E+E+ E+E+AR+L +
Sbjct: 482 ENLGDWDRVRGIYTIALDENSDFLTKEAKIVLLQKYITFETESQEFEKARKLYRRYLELN 541
Query: 920 -----ARAQAGAFQANPNSEEIWLAAVKLESEN 947
+ + +Q + +E+ L KL+SEN
Sbjct: 542 QYSPQSWIEFAMYQTSTPTEQQLLDLAKLQSEN 574
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 10/198 (5%)
Query: 906 ENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARA--S 963
E EY+R +R G + N W+ + E E ++ RAR + +A S
Sbjct: 42 ELREYQRRKR-----TEYEGYLKRNRLDMGQWIRYAQFEIEQHDMRRARSIFERALLVDS 96
Query: 964 APTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDT 1023
+ P + I+ E + + A L++ AI P KLW +EE N ++
Sbjct: 97 SFIP-LWIRYIDAELKVKCINHARNLMNRAISTLPRVDKLWYKYLIVEESLNNVEIVRSL 155
Query: 1024 FSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAG 1083
+++ P V W + E R+K R + K + +P + WL +R E R G
Sbjct: 156 YTKWCSLEP-GVNAWNSFVDFEIRQKNWNGVREIYSKYVMAHPQM-QTWLKWVRFENRHG 213
Query: 1084 LKDIANTMMAKALQECPN 1101
+ ++ + A+ N
Sbjct: 214 NTEFTRSVYSLAIDTVAN 231
Score = 40.8 bits (94), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 1038 WIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQ 1097
WI A E + + +ARS+ E+ L + + LW+ I E++ + A +M +A+
Sbjct: 68 WIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAIS 127
Query: 1098 ECPNAGILWAEAIFLE 1113
P LW + + +E
Sbjct: 128 TLPRVDKLWYKYLIVE 143
Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 24/170 (14%)
Query: 828 IWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVL--WL-MGAKSKWLAGDVPAARGILS 884
IWL A F H +L KA+ CPK++ ++ + K K + R I
Sbjct: 406 IWLMYAKFLIRHDDVPKARKILGKAIGLCPKAKTFKGYIELEVKLK----EFDRVRKIYE 461
Query: 885 LAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLE 944
+ P+ +IW +LE +++R R + A + F + + E
Sbjct: 462 KFIEFQPSDLQIWSQYGELEENLGDWDRVRGIYTIALDENSDFLTKEAKIVLLQKYITFE 521
Query: 945 SENNEYERARRL-----------------LAKARASAPTPRVMIQSAKLE 977
+E+ E+E+AR+L A + S PT + ++ AKL+
Sbjct: 522 TESQEFEKARKLYRRYLELNQYSPQSWIEFAMYQTSTPTEQQLLDLAKLQ 571
>sp|Q9P7R9|SYF1_SCHPO Pre-mRNA-splicing factor cwf3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf3 PE=1 SV=1
Length = 790
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 20/187 (10%)
Query: 895 EIWLAAVKLESENNEYERARRLLAKA-----RAQAGAFQANPN-------SEEIWLAAVK 942
++W+ ++E + ++ AR+L+ A ++ F + + S +IW+ +
Sbjct: 429 QVWIDWAEMELRHQNFDAARKLIGDAVHAPRKSHISFFDESLSPQVRLHKSSKIWMYYLD 488
Query: 943 LESENNEYERARRLLAKA-RASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVF--PD 999
LE E R+L + TP+V++ A L E + ++ + + +F P
Sbjct: 489 LEESVGTIETTRKLYDRVFELKIATPQVVVNYANLLEENAYFEDSFKIYERGVALFSYPV 548
Query: 1000 FAKLW---MMKGQIEEQKNLLDKAHDTFSQAIKKCP--HSVPLWIMLANLEERRKMLIKA 1054
+LW + K Q +++ D F QA++ CP S ++++ A+ EE+ ++
Sbjct: 549 AFELWNLYLTKFVKRYQGTHMERTRDLFEQALEGCPPEFSKSIYLLYADFEEKFGKAKRS 608
Query: 1055 RSVLEKG 1061
S+LEK
Sbjct: 609 ISILEKA 615
>sp|Q6CAR6|SYF1_YARLI Pre-mRNA-splicing factor SYF1 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=SYF1 PE=3 SV=1
Length = 736
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 895 EIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSE-----------EIWLAAVKL 943
+++LA + ESEN+ +E A +++ +A + NS+ +W L
Sbjct: 398 DVYLAWSQYESENDHWENAVKIIKQALESPNTHVSYHNSDLTAQDRIHKSVRLWSYYADL 457
Query: 944 ESENNEYERARRLLAKARA-SAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFA- 1001
+E +++ K A TP ++ A L D+ E ++ ++ I +F + A
Sbjct: 458 VESYGTFEETKQVYEKIMALDLLTPLFVVNYATLLEENDHFEEMFKVYEKGISLFEESAF 517
Query: 1002 KLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSV 1057
++W + + L++ D F AI K P L+I+ LEE R ++ A V
Sbjct: 518 EIWNLYLVKASPRLGLERLRDLFEDAISKFPTQKALYILYGKLEEDRGLVRNAMRV 573
>sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDCD11 PE=1 SV=3
Length = 1871
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 48/272 (17%)
Query: 629 LSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTDRQ-----IWTTAAKL 679
R V P S LWL E AR V +A + I + +W L
Sbjct: 1608 FDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNL 1667
Query: 680 EEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIR-----A 734
E +G+ + K+ +RA+ V ++ + ++ + ++AG ++ + L R A
Sbjct: 1668 ENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYN-RMLKRFRQEKA 1726
Query: 735 I-IGYGV-----EQEDRKHTWMEDAESCA-----------------NQGAYECARAIYAQ 771
+ I YG Q H ++ A C G E A+AI+
Sbjct: 1727 VWIKYGAFLLRRSQAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFEN 1786
Query: 772 ALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLR 831
L+T+P + +W HG+++ + + ++ V+ L A K + R
Sbjct: 1787 TLSTYPKRTDVWSVYIDMTIKHGSQKDVRDIFER---------VIHLSLAPKRMKFFFKR 1837
Query: 832 AAYFEKNHGTRESLETLLQKAVAHC-PKSEVL 862
+EK HGT + ++ + KA+ + KS VL
Sbjct: 1838 YLDYEKQHGTEKDVQAVKAKALEYVEAKSSVL 1869
Score = 38.1 bits (87), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 28/200 (14%)
Query: 749 WMEDAESCANQGAYECARAIYAQALATFP-----SKKSIWLRAAYFEKNHGTRESLETLL 803
W++ E ARA+ +AL T K ++W+ E +G++ESL +
Sbjct: 1622 WLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVF 1681
Query: 804 QKAVAHCPKSEVLWLMG---AKSNK------------------KSIWLRAAYFEKNHGTR 842
++AV + +V + AKS K K++W++ F
Sbjct: 1682 ERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRSQA 1741
Query: 843 ESLETLLQKAVAHCPKSEVLWLMG--AKSKWLAGDVPAARGILSLAFQANPNSEEIWLAA 900
+ +LQ+A+ P E + ++ A+ ++ GD A+ I P ++W
Sbjct: 1742 AASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWSVY 1801
Query: 901 VKLESENNEYERARRLLAKA 920
+ + ++ + R + +
Sbjct: 1802 IDMTIKHGSQKDVRDIFERV 1821
Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 35/189 (18%)
Query: 851 KAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEE-----IWLAAVKLES 905
+ V P S +LWL A ++ AR + A + EE +W+A + LE+
Sbjct: 1610 RLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLEN 1669
Query: 906 ENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYER------------- 952
E ++ +A + + +I+ + K + Y R
Sbjct: 1670 MYGSQESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWI 1729
Query: 953 --------------ARRLLAKARASAPTPR---VMIQSAKLEWCLDNLERALQLLDEAIK 995
+ R+L +A P+ V+ + A+LE+ L + ERA + + +
Sbjct: 1730 KYGAFLLRRSQAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLS 1789
Query: 996 VFPDFAKLW 1004
+P +W
Sbjct: 1790 TYPKRTDVW 1798
>sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdcd11 PE=2 SV=2
Length = 1862
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 102/262 (38%), Gaps = 47/262 (17%)
Query: 631 RAVECCPTSVELWLALARLET----YENARKVLNKARENIPTDRQ-----IWTTAAKLEE 681
R V P S LWL E AR V +A + I + +W LE
Sbjct: 1601 RLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLEN 1660
Query: 682 AHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIR-----AI- 735
+G+ + K+ +RA+ V ++ + ++ + ++AG ++ + L R A+
Sbjct: 1661 MYGSQESLTKVFERAVQYNEPLKVFLHLADIYTKSEKYKEAGELYN-RMLKRFRQEKAVW 1719
Query: 736 IGYGV-----EQEDRKHTWMEDAESCA-----------------NQGAYECARAIYAQAL 773
I YG Q H ++ A C G E A+AI+ L
Sbjct: 1720 IKYGAFVLGRSQAGASHRVLQRALECLPAKEHVDVIVKFAQLEFQLGDVERAKAIFENTL 1779
Query: 774 ATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAA 833
+T+P + +W HG++ ++ + ++ V+ L A K + R
Sbjct: 1780 STYPKRTDVWSVYIDMTIKHGSQTAVRDIFER---------VIHLSLAPKRMKFFFKRYL 1830
Query: 834 YFEKNHGTRESLETLLQKAVAH 855
+EK HGT + ++ + KA+ +
Sbjct: 1831 DYEKQHGTEKDVQAVKAKALEY 1852
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 116/275 (42%), Gaps = 36/275 (13%)
Query: 501 RLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCE-----ENQTSEDLWLEA 555
RL+L S PN W+ +++ AR + + + E Q ++W+
Sbjct: 1601 RLVLSS-----PNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVAL 1655
Query: 556 ARLQPV----DTARAVIAQAVRHIPTSVRIWIKAADLETET---KAKRRVYRKALEHIPN 608
L+ + ++ V +AV++ +++++ AD+ T++ K +Y + L+
Sbjct: 1656 LNLENMYGSQESLTKVFERAVQY-NEPLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQ 1714
Query: 609 SVRLW--KAAVELEDPED--ARILLSRAVECCPTS--VELWLALARLET----YENARKV 658
+W A L + + +L RA+EC P V++ + A+LE E A+ +
Sbjct: 1715 EKAVWIKYGAFVLGRSQAGASHRVLQRALECLPAKEHVDVIVKFAQLEFQLGDVERAKAI 1774
Query: 659 LNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALS-SLSANGVEINREHWFKEAI 717
P +W+ + HG+ V I +R + SL+ ++ +FK +
Sbjct: 1775 FENTLSTYPKRTDVWSVYIDMTIKHGSQTAVRDIFERVIHLSLAPKRMKF----FFKRYL 1830
Query: 718 EAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMED 752
+ EK H + ++A+ +E + K + +ED
Sbjct: 1831 DYEKQ---HGTEKDVQAVKAKALEYVEAKSSALED 1862
Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 77/200 (38%), Gaps = 28/200 (14%)
Query: 749 WMEDAESCANQGAYECARAIYAQALATFP-----SKKSIWLRAAYFEKNHGTRESLETLL 803
W++ E ARA+ +AL T K ++W+ E +G++ESL +
Sbjct: 1613 WLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVF 1672
Query: 804 QKAVAHCPKSEVLWLMG---AKSNK------------------KSIWLRAAYFEKNHGTR 842
++AV + +V + KS K K++W++ F
Sbjct: 1673 ERAVQYNEPLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQEKAVWIKYGAFVLGRSQA 1732
Query: 843 ESLETLLQKAVAHCPKSEVLWLM--GAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAA 900
+ +LQ+A+ P E + ++ A+ ++ GDV A+ I P ++W
Sbjct: 1733 GASHRVLQRALECLPAKEHVDVIVKFAQLEFQLGDVERAKAIFENTLSTYPKRTDVWSVY 1792
Query: 901 VKLESENNEYERARRLLAKA 920
+ + ++ R + +
Sbjct: 1793 IDMTIKHGSQTAVRDIFERV 1812
Score = 37.0 bits (84), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/213 (18%), Positives = 77/213 (36%), Gaps = 35/213 (16%)
Query: 851 KAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEE-----IWLAAVKLES 905
+ V P S +LWL A ++ AR + A + EE +W+A + LE+
Sbjct: 1601 RLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLEN 1660
Query: 906 ENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYER------------- 952
E ++ +A + + +I+ + K + Y R
Sbjct: 1661 MYGSQESLTKVFERAVQYNEPLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQEKAVWI 1720
Query: 953 --------------ARRLLAKARASAPTPR---VMIQSAKLEWCLDNLERALQLLDEAIK 995
+ R+L +A P V+++ A+LE+ L ++ERA + + +
Sbjct: 1721 KYGAFVLGRSQAGASHRVLQRALECLPAKEHVDVIVKFAQLEFQLGDVERAKAIFENTLS 1780
Query: 996 VFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAI 1028
+P +W + + + D F + I
Sbjct: 1781 TYPKRTDVWSVYIDMTIKHGSQTAVRDIFERVI 1813
>sp|Q58741|Y1345_METJA TPR repeat-containing protein MJ1345 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1345 PE=4 SV=1
Length = 314
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 126/311 (40%), Gaps = 55/311 (17%)
Query: 946 ENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWM 1005
E YE+A L+ K +P V ++ A++ L ++AL+ D+A+K+ P +
Sbjct: 24 EKRNYEKALLLIDKILEVRESPDVYVRKARILRTLGENDKALEYFDKALKLKPKYILANF 83
Query: 1006 MKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRN 1065
+KG L + L LEE +++ +K RL
Sbjct: 84 LKG---------------------------ALLVSLGKLEEAKEVFLKL------CRLEK 110
Query: 1066 PNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWA---EAIFLEPRPQRKTKS 1122
+ ++ A ++ + G D A ++ K L++ P + I WA E ++ E + ++ +
Sbjct: 111 SDLPVKYVTAFILK-KLGEYDYALKIIDKILKKYPKSAIAWAEKGEILYREGKLKKSLEC 169
Query: 1123 VD-ALKKCEHDPHVLLAVSKLFWCENKNQKCHRSG-SRRCMGVKTKSVDALKKCEHDPHV 1180
D ALK D LL ++ + K R G + +C+ ++ D
Sbjct: 170 FDNALKINPKDCQSLLYKGEILF------KLGRYGEALKCLK------KVFERNNKDIRA 217
Query: 1181 LLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVK--KRC 1238
L+ + ++ + + E+ + +K++PD D Y YK I+N + +K +
Sbjct: 218 LMYIIQILIYLGRLNQALEYTKKALKLNPD--DPLLYLYKGIILNKLGKYNEAIKYFDKV 275
Query: 1239 LAAEPKHGENW 1249
L P + W
Sbjct: 276 LEINPNIPDAW 286
>sp|Q1JPZ7|PRP39_DANRE Pre-mRNA-processing factor 39 OS=Danio rerio GN=prpf39 PE=2 SV=2
Length = 752
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 160/433 (36%), Gaps = 62/433 (14%)
Query: 574 HIPTSVRIWIKAADLETE---TKAKRRVYRKALEHIPNSVRLWKAAV----ELEDPEDA- 625
H P W K AD+E + + VYR+ L+ IP SV LW + E +D D
Sbjct: 195 HYPYCYGYWKKYADIERKHGYIQMADEVYRRGLQAIPLSVDLWLHYITFLRENQDTSDGE 254
Query: 626 -----RILLSRAVECCPT---SVELWLALARLETYE----NARKVLNKARENIPTDRQIW 673
R AV C T S LW A ET + N + ++ IPT Q++
Sbjct: 255 AESRIRASYEHAVLACGTDFRSDRLWEAYIAWETEQGKLANVTAIYDRLL-CIPT--QLY 311
Query: 674 TTA-AKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALI 732
+ K ++ +N + + SL N+ ++A + +
Sbjct: 312 SQHFQKFKDHVQSNNPKHFLSEEEFVSLRVELANANKPSGDEDAETEAPGEELPPGTEDL 371
Query: 733 RAIIGYGVEQEDRKHTWMEDAESCANQGAYECARA---------IYAQALATFPSKKSIW 783
E E+ +H +E + N +E ++ Y A ++ + W
Sbjct: 372 PDPAKRVTEIENMRHKVIETRQEMFNHNEHEVSKRWAFEEGIKRPYFHVKALEKTQLNNW 431
Query: 784 LRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRE 843
FE +GT E + L ++ + C E W+ AK Y E + E
Sbjct: 432 REYLDFELENGTPERVVVLFERCLIACALYEEFWIKYAK-----------YLESY--STE 478
Query: 844 SLETLLQKA-VAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVK 902
++ + +KA H PK + L+ A + G + AR IL + P + L V
Sbjct: 479 AVRHIYKKACTVHLPKKPNVHLLWAAFEEQQGSIDEARSILKAVEVSVPGLAMVRLRRVS 538
Query: 903 LESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARA 962
LE + E A LL A NS E +VKL AR+L+ ++
Sbjct: 539 LERRHGNMEEAEALLQDAITNGR------NSSESSFYSVKL---------ARQLVKVQKS 583
Query: 963 SAPTPRVMIQSAK 975
+V++++ +
Sbjct: 584 IGRAKKVLLEAVE 596
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 1013 QKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELW 1072
Q+ L ++ S+ ++ P W+ L E+ L+ +R + L P C W
Sbjct: 144 QEPELPTEYERLSKVVEDNPEDFNGWVYLLQYVEQENHLLGSRKAFDAFFLHYPYCYGYW 203
Query: 1073 LAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAI-FL 1112
+E + G +A+ + + LQ P + LW I FL
Sbjct: 204 KKYADIERKHGYIQMADEVYRRGLQAIPLSVDLWLHYITFL 244
>sp|Q6FW76|CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CLF1 PE=3
SV=1
Length = 695
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 6/171 (3%)
Query: 1001 AKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEK 1060
K WM E +++ + +A F +A++ VPLWI E + + AR++LE+
Sbjct: 61 VKQWMRYAVFEIEQHDMRRARSIFERALRVHISYVPLWIRYIESELKLGYINHARNILER 120
Query: 1061 GRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKT 1120
+ P +LW + VE DI + K P A + W E R +R
Sbjct: 121 AITKLPRVDKLWYKYLIVEESLAHFDIVRNLFQKWCSLEPAAHV-WDSFTDFEVRQERYE 179
Query: 1121 KSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDAL 1171
+ K +VL+ W + N + ++ V + ++DAL
Sbjct: 180 DVRNIYSK-----YVLIHPQFSTWRKWINFEVRYGSTKTVRSVYSLALDAL 225
Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 50/104 (48%)
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCA 1069
+EE K++ + F +K+ V W+ A E + + +ARS+ E+ + +
Sbjct: 36 LEELKDVQRRKRTEFEGYLKRNRLDVKQWMRYAVFEIEQHDMRRARSIFERALRVHISYV 95
Query: 1070 ELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
LW+ I E++ G + A ++ +A+ + P LW + + +E
Sbjct: 96 PLWIRYIESELKLGYINHARNILERAITKLPRVDKLWYKYLIVE 139
Score = 41.6 bits (96), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 76/387 (19%), Positives = 146/387 (37%), Gaps = 55/387 (14%)
Query: 749 WMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVA 808
W+ ES G AR I +A+ P +W + E++ + + L QK +
Sbjct: 98 WIRYIESELKLGYINHARNILERAITKLPRVDKLWYKYLIVEESLAHFDIVRNLFQKWCS 157
Query: 809 HCPKSEVLWLMGAKSNKK---------------------SIWLRAAYFEKNHGTRESLET 847
P + V W + S W + FE +G+ +++ +
Sbjct: 158 LEPAAHV-WDSFTDFEVRQERYEDVRNIYSKYVLIHPQFSTWRKWINFEVRYGSTKTVRS 216
Query: 848 LLQKAV-AHCPKSE--------VLWLMGAKSKW--LAGDVPAARGILSLAFQANPNSEEI 896
+ A+ A SE + L+ SKW L + ++ +L +A Q P S +
Sbjct: 217 VYSLALDALIAYSESRNELVDDCINLIVEFSKWEALQKEYIRSKSLLEIAIQKWPKSNTL 276
Query: 897 WLAAVKLESENNEYERARR--LLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERAR 954
A ++ E E+ E +L + + + WL ++L ENN +
Sbjct: 277 NNALLQFEREHGTAETLENTIILNRKKHYEDILNEKVYDYDTWLLYLQL-LENNYPKLVM 335
Query: 955 RLLAKA-RASAPTPRVMIQSAK------------LEWCLDNLERALQLLDEAI-KVFPD- 999
+ A+ PT R + K LE ++++ Q +E I + P+
Sbjct: 336 EAFSNVLNAAIPTSRTKDKYWKQYILIWIKYLTFLELTINDIPLCGQKFEELIHNIIPND 395
Query: 1000 ---FAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARS 1056
F+K+W++ + E +++ L+KA +++ CP + +LE + + + R
Sbjct: 396 DFTFSKIWILYAEFEIRQDNLEKARSILGRSLGLCPKRKTFKYYI-DLETKLREFDRVRI 454
Query: 1057 VLEKGRLRNPNCAELWLAAIRVEIRAG 1083
+ E +P + W A + E G
Sbjct: 455 LYENFLKFDPLNLDTWRAYVEFEDSLG 481
Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 3/161 (1%)
Query: 937 WLAAVKLESENNEYERARRLLAKA-RASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIK 995
W+ E E ++ RAR + +A R + I+ + E L + A +L+ AI
Sbjct: 64 WMRYAVFEIEQHDMRRARSIFERALRVHISYVPLWIRYIESELKLGYINHARNILERAIT 123
Query: 996 VFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKAR 1055
P KLW +EE D + F + P + +W + E R++ R
Sbjct: 124 KLPRVDKLWYKYLIVEESLAHFDIVRNLFQKWCSLEP-AAHVWDSFTDFEVRQERYEDVR 182
Query: 1056 SVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKAL 1096
++ K L +P + W I E+R G ++ + AL
Sbjct: 183 NIYSKYVLIHPQFST-WRKWINFEVRYGSTKTVRSVYSLAL 222
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 89/231 (38%), Gaps = 40/231 (17%)
Query: 829 WLRAAYFE-KNHGTRES---LETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILS 884
W+R A FE + H R + E L+ +++ P LW+ +S+ G + AR IL
Sbjct: 64 WMRYAVFEIEQHDMRRARSIFERALRVHISYVP----LWIRYIESELKLGYINHARNILE 119
Query: 885 LAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLE 944
A P +++W + +E ++ R L K + A +W + E
Sbjct: 120 RAITKLPRVDKLWYKYLIVEESLAHFDIVRNLFQKWCSLEPA-------AHVWDSFTDFE 172
Query: 945 SENNEYERARRLLAK------------------ARASAPTPRVMIQSAKLEWCLDNLERA 986
YE R + +K R + + S L+ + E
Sbjct: 173 VRQERYEDVRNIYSKYVLIHPQFSTWRKWINFEVRYGSTKTVRSVYSLALDALIAYSESR 232
Query: 987 LQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPL 1037
+L+D+ I + +F+K ++ + K+LL+ AI+K P S L
Sbjct: 233 NELVDDCINLIVEFSKWEALQKEYIRSKSLLEI-------AIQKWPKSNTL 276
Score = 38.5 bits (88), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 145/387 (37%), Gaps = 70/387 (18%)
Query: 564 ARAVIAQAVRHIPTSVRIWIKAADLETETKA-----KRRVYRKALEHIPNSVRLWKAAVE 618
AR++ +A+R + V +WI+ +E+E K R + +A+ +P +LW +
Sbjct: 80 ARSIFERALRVHISYVPLWIRY--IESELKLGYINHARNILERAITKLPRVDKLWYKYLI 137
Query: 619 LEDP----EDARILLSRAVECCPTSVELWLAL----ARLETYENARKVLNKARENIPTDR 670
+E+ + R L + P + +W + R E YE+ R + +K I
Sbjct: 138 VEESLAHFDIVRNLFQKWCSLEPAA-HVWDSFTDFEVRQERYEDVRNIYSKYVL-IHPQF 195
Query: 671 QIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQA 730
W E +G+ V + AL +L A + E+ + V C
Sbjct: 196 STWRKWINFEVRYGSTKTVRSVYSLALDALIA----------YSES----RNELVDDCIN 241
Query: 731 LIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFE 790
LI +E ++ A Q Y ++++ A+ +P ++ FE
Sbjct: 242 LI-----------------VEFSKWEALQKEYIRSKSLLEIAIQKWPKSNTLNNALLQFE 284
Query: 791 KNHGTRESLE-TLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLL 849
+ HGT E+LE T++ H ++ K WL +N+ + +E
Sbjct: 285 REHGTAETLENTIILNRKKHYED-----ILNEKVYDYDTWLLYLQLLENNYPKLVMEAFS 339
Query: 850 QKAVAHCPKSE----------VLWLMGAKSKWLA-GDVP-AARGILSLAFQANPNSE--- 894
A P S ++W+ L D+P + L PN +
Sbjct: 340 NVLNAAIPTSRTKDKYWKQYILIWIKYLTFLELTINDIPLCGQKFEELIHNIIPNDDFTF 399
Query: 895 -EIWLAAVKLESENNEYERARRLLAKA 920
+IW+ + E + E+AR +L ++
Sbjct: 400 SKIWILYAEFEIRQDNLEKARSILGRS 426
>sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1
Length = 1874
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 28/186 (15%)
Query: 763 ECARAIYAQALATFP-----SKKSIWLRAAYFEKNHGTRESLETLLQKAVAH-------- 809
E ARA+ +AL T K ++W+ E +G++ESL + ++AV +
Sbjct: 1639 EKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNEPLKVFL 1698
Query: 810 -----CPKSEVLWLMGAKSNK--------KSIWLRAAYFEKNHGTRESLETLLQKAVAHC 856
KSE G N+ K++W++ F G E+ ++Q+A+
Sbjct: 1699 HLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLLRRGKAEASHRVMQRALECL 1758
Query: 857 PKSEVLWLMG--AKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERAR 914
PK E + ++ A+ ++ GD AR I P ++W + + ++ + AR
Sbjct: 1759 PKKEHVDVIAKFAQLEFQLGDAERARAIFESTLSIYPKRTDVWSVYIDMIIKHGSQKEAR 1818
Query: 915 RLLAKA 920
+ +
Sbjct: 1819 AIFERV 1824
Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 43/237 (18%)
Query: 653 ENARKVLNKARENIPTDRQ-----IWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEI 707
E AR V +A + I + +W LE +G+ + K+ +RA+ V +
Sbjct: 1639 EKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNEPLKVFL 1698
Query: 708 NREHWFKEAIEAEKAGSVHTCQALIR-----AI-IGYGV-----EQEDRKHTWMEDAESC 756
+ + ++ + ++AG ++ + L R A+ + YG + + H M+ A C
Sbjct: 1699 HLADIYTKSEKFQEAGELYN-RMLKRFRQEKAVWVKYGAFLLRRGKAEASHRVMQRALEC 1757
Query: 757 ANQ-----------------GAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESL 799
+ G E ARAI+ L+ +P + +W HG+++
Sbjct: 1758 LPKKEHVDVIAKFAQLEFQLGDAERARAIFESTLSIYPKRTDVWSVYIDMIIKHGSQKEA 1817
Query: 800 ETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHC 856
+ ++ V+ L A K + R +EK HG+ + ++ + KA+ +
Sbjct: 1818 RAIFER---------VIHLSLAPKRMKFFFKRYLDYEKQHGSEKDVQAVKAKALEYV 1865
>sp|Q80XC6|NRDE2_MOUSE Protein NRDE2 homolog OS=Mus musculus GN=Nrde2 PE=2 SV=3
Length = 1172
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 25/156 (16%)
Query: 979 CLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLW 1038
C+ L + L +A+K++P LW QI+ + + +K F + H P W
Sbjct: 984 CVYPLAPLRETLSDALKLYPGNQVLWRAYVQIQNKSHSANKTRRFFDTVTRSAKHLEP-W 1042
Query: 1039 IMLANLEERRKMLIKA----------RSVLEKG---RLR-----------NPNCAELWLA 1074
+ E+ RK L+++ ++ E G R+R C LW
Sbjct: 1043 LFAIEAEKLRKKLVESVQRVGGREVHATIPETGLTHRIRALFENAIRSDKGNQCPLLWRM 1102
Query: 1075 AIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAI 1110
+ + G K+ + + KALQ CP A +L+ +A+
Sbjct: 1103 YLNFLVSLGNKERSKGVFYKALQSCPWAKVLYMDAM 1138
>sp|Q4P7S1|SYF1_USTMA Pre-mRNA-splicing factor SYF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=SYF1 PE=3 SV=1
Length = 1081
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 875 DVPAARGI----LSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARA---QAGAF 927
D+ +AR I +++ F+ + EIW ++E ++ Y+ A R +A++ A
Sbjct: 657 DLESARKIFEKAITIPFRRVDDLAEIWCEWAEMELRHSNYDEAIRTMARSVAPPRNTKGI 716
Query: 928 QANPN----------SEEIWLAAVKLESENNEYERARRLLAKA-RASAPTPRVMIQSAKL 976
Q + + S ++W V LE + E +R+ K + +++I A
Sbjct: 717 QYHDDTLPPQTRLFKSLKLWSFYVDLEESLGDVESTKRVYEKMLELKIASAQIIINYAAF 776
Query: 977 EWCLDNLERALQLLDEAIKVF--PDFAKLW---MMKGQIEEQKNLLDKAHDTFSQAIKKC 1031
E + ++ + +++F P ++W + K L++A D F QA+ KC
Sbjct: 777 LEDNKYFEESFKVFERGVELFSYPVAFEIWNVYLSKFVKRYGGAKLERARDLFEQALDKC 836
Query: 1032 PHSV--PLWIMLANLEERRKMLIKARSVLEKG 1061
P PL +M LEE ++ +A + E+
Sbjct: 837 PARFCKPLMLMYGQLEEEHGLVKRAMKIYERA 868
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 38/254 (14%)
Query: 578 SVRIWIKAADLET---ETKAKRRVYRKALE-HIPNSVRLWKAAVELEDP---EDARILLS 630
S+++W DLE + ++ +RVY K LE I ++ + A LED E++ +
Sbjct: 732 SLKLWSFYVDLEESLGDVESTKRVYEKMLELKIASAQIIINYAAFLEDNKYFEESFKVFE 791
Query: 631 RAVECC--PTSVELW-LALARL------ETYENARKVLNKARENIPTD--RQIWTTAAKL 679
R VE P + E+W + L++ E AR + +A + P + + +L
Sbjct: 792 RGVELFSYPVAFEIWNVYLSKFVKRYGGAKLERARDLFEQALDKCPARFCKPLMLMYGQL 851
Query: 680 EEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYG 739
EE HG KI +RA ++S + + + KA + A R I
Sbjct: 852 EEEHGLVKRAMKIYERATRAVSTD------DRFDMYVFYIAKAAATFGLAA-TRPIYERA 904
Query: 740 VEQEDRKHTWMEDAESCANQGAYE-------CARAIYAQA--LATFPSKKSIWLRAAYFE 790
+E + T AE C A E AR IYA A ++ W FE
Sbjct: 905 IESLPDRQT----AEMCLRFAALERKLGEIDRARVIYAHASQFCDPRTQTDFWKEWNQFE 960
Query: 791 KNHGTRESLETLLQ 804
G+ ++ +L+
Sbjct: 961 IETGSEDTFREMLR 974
>sp|Q9LEM8|NAC2_CHLRE PsbD mRNA maturation factor Nac2, chloroplastic OS=Chlamydomonas
reinhardtii GN=NAC2 PE=1 SV=1
Length = 1385
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 851 KAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEY 910
+A+ CP L+++ A + A ++ A+G A+ + ++++L ++E+ +
Sbjct: 976 EALRKCPADVALYVLAASVELEASNLELAKGYCQRAYALDRTDKQLFLIWPRVEAGLGDR 1035
Query: 911 ERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKA---RASAPTP 967
++AR L + A A+P + +I + E+E Y A L +A +P P
Sbjct: 1036 DKARLLFER------ALDAHPLNTKIINMYARFEAEEGSYREAAELYDRALQIDPLSPGP 1089
Query: 968 RVMIQS--AKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIE 1011
V ++ A +E L N A QLL+E ++ P+ A L ++ +++
Sbjct: 1090 GVHNRADWASMETDLGNTGLARQLLEEGLEAHPNSAALLVVYSKLQ 1135
>sp|Q9ULT0|TTC7A_HUMAN Tetratricopeptide repeat protein 7A OS=Homo sapiens GN=TTC7A PE=1
SV=3
Length = 858
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 35/184 (19%)
Query: 519 IASARLEEVTGKVQAARNLIMKGCEENQTS-EDLWLEAARL----QPVDTARAVIAQAVR 573
IA++RLEE ++ +++ +G + T+ E +WL+AA L Q + A I +A
Sbjct: 680 IAASRLEEAMSELTMPSSVLKQGPMQLWTTLEQIWLQAAELFMEQQHLKEAGFCIQEAAG 739
Query: 574 HIPTSVRIWI---KAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLS 630
PTS + + A+++ + +++Y++AL P+ VR+ +
Sbjct: 740 LFPTSHSVLYMRGRLAEVKGNLEEAKQLYKEALTVNPDGVRIMHS--------------- 784
Query: 631 RAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNN-AMV 689
L L L+RL A+KVL A E T + W ++ +A G N A V
Sbjct: 785 -----------LGLMLSRLGHKSLAQKVLRDAVERQSTCHEAWQGLGEVLQAQGQNEAAV 833
Query: 690 DKII 693
D +
Sbjct: 834 DCFL 837
Score = 36.6 bits (83), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 898 LAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLL 957
+AA +LE +E +L + G Q E+IWL A +L E + A +
Sbjct: 680 IAASRLEEAMSELTMPSSVLKQ-----GPMQLWTTLEQIWLQAAELFMEQQHLKEAGFCI 734
Query: 958 AKARASAPTPR-VMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKL 1003
+A PT V+ +L NLE A QL EA+ V PD ++
Sbjct: 735 QEAAGLFPTSHSVLYMRGRLAEVKGNLEEAKQLYKEALTVNPDGVRI 781
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%)
Query: 968 RVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQA 1027
++ +Q+A+L +L+ A + EA +FP + M+G++ E K L++A + +A
Sbjct: 712 QIWLQAAELFMEQQHLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGNLEEAKQLYKEA 771
Query: 1028 IKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELW 1072
+ P V + L + R A+ VL R C E W
Sbjct: 772 LTVNPDGVRIMHSLGLMLSRLGHKSLAQKVLRDAVERQSTCHEAW 816
>sp|P0CO08|SYF1_CRYNJ Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SYF1 PE=3 SV=1
Length = 1031
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 34/216 (15%)
Query: 875 DVPAARGILSLA----FQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQAN 930
D+ AR I A F+A E+W ++E N YE A RL+ +A + N
Sbjct: 611 DLEQARKIFERATKVPFKAVDELAEVWCEWAEMELRNENYEEAIRLMQRATTVPKNTKIN 670
Query: 931 PNSEEI-----WLAAVKL--------------ESENNEYERARRL-LAKARASAPTPRVM 970
+ I ++KL ES Y++ L +A A+ +
Sbjct: 671 YYDDNIPPQSRLFKSLKLWSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFL 730
Query: 971 IQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLW---MMKGQIEEQKNLLDKAHDTFSQA 1027
++ E ER ++L FP ++W + K L++A D F QA
Sbjct: 731 EENKYFEESFKVYERGIELFH-----FPIAFEIWNIYLSKFVKRYGGKKLERARDLFEQA 785
Query: 1028 IKKCPHSV--PLWIMLANLEERRKMLIKARSVLEKG 1061
++ CP PL++M A LEE + +A + ++
Sbjct: 786 LENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRA 821
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 578 SVRIWIKAADLETE---TKAKRRVYRKALE-HIPNSVRLWKAAVELEDP---EDARILLS 630
S+++W +DLE ++ + VY K +E I N+ + A LE+ E++ +
Sbjct: 685 SLKLWSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFLEENKYFEESFKVYE 744
Query: 631 RAVECC--PTSVELW-LALARL------ETYENARKVLNKARENIPTD--RQIWTTAAKL 679
R +E P + E+W + L++ + E AR + +A EN P + ++ AKL
Sbjct: 745 RGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERARDLFEQALENCPEKFCKPLYLMYAKL 804
Query: 680 EEAHGNNAMVDKIIDRALSSL 700
EE HG I DRA S++
Sbjct: 805 EEEHGLAKRAMGIYDRAASTV 825
>sp|P0CO09|SYF1_CRYNB Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SYF1 PE=3 SV=1
Length = 1031
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 34/216 (15%)
Query: 875 DVPAARGILSLA----FQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQAN 930
D+ AR I A F+A E+W ++E N YE A RL+ +A + N
Sbjct: 611 DLEQARKIFERATKVPFKAVDELAEVWCEWAEMELRNENYEEAIRLMQRATTVPKNTKIN 670
Query: 931 PNSEEI-----WLAAVKL--------------ESENNEYERARRL-LAKARASAPTPRVM 970
+ I ++KL ES Y++ L +A A+ +
Sbjct: 671 YYDDNIPPQSRLFKSLKLWSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFL 730
Query: 971 IQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLW---MMKGQIEEQKNLLDKAHDTFSQA 1027
++ E ER ++L FP ++W + K L++A D F QA
Sbjct: 731 EENKYFEESFKVYERGIELFH-----FPIAFEIWNIYLSKFVKRYGGKKLERARDLFEQA 785
Query: 1028 IKKCPHSV--PLWIMLANLEERRKMLIKARSVLEKG 1061
++ CP PL++M A LEE + +A + ++
Sbjct: 786 LENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRA 821
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 578 SVRIWIKAADLETE---TKAKRRVYRKALE-HIPNSVRLWKAAVELEDP---EDARILLS 630
S+++W +DLE ++ + VY K +E I N+ + A LE+ E++ +
Sbjct: 685 SLKLWSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFLEENKYFEESFKVYE 744
Query: 631 RAVECC--PTSVELW-LALARL------ETYENARKVLNKARENIPTD--RQIWTTAAKL 679
R +E P + E+W + L++ + E AR + +A EN P + ++ AKL
Sbjct: 745 RGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERARDLFEQALENCPEKFCKPLYLMYAKL 804
Query: 680 EEAHGNNAMVDKIIDRALSSL 700
EE HG I DRA S++
Sbjct: 805 EEEHGLAKRAMGIYDRAASTV 825
>sp|Q58350|Y940_METJA TPR repeat-containing protein MJ0940 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0940 PE=4 SV=1
Length = 318
Score = 42.7 bits (99), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 969 VMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAI 1028
V+ ++ L + + L++A + ++ +K+ PD A LW KG++ E++N ++A +++AI
Sbjct: 223 VIREAIYLSFLFNKLDKAEKYIEMGLKLRPDDASLWYFKGKLYEKQNKFEEALKYYNKAI 282
Query: 1029 KKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRL 1063
+ PH + +L KAR + + GR+
Sbjct: 283 QLMPHHT------------KALLAKARVLEKLGRI 305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 492,739,086
Number of Sequences: 539616
Number of extensions: 22066851
Number of successful extensions: 117391
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 592
Number of HSP's that attempted gapping in prelim test: 107273
Number of HSP's gapped (non-prelim): 7253
length of query: 1278
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1149
effective length of database: 121,958,995
effective search space: 140130885255
effective search space used: 140130885255
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)