AmiGO: BLAST Results


BLAST match view associations BLAST with CG6841 CG6841 CG6841	protein from Drosophila melanogaster	5.2e-255
BLAST match view associations BLAST with prpf6 prpf6 prpf6 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)	gene_product from Danio rerio	2.0e-221
BLAST match view associations BLAST with PRPF6 PRPF6 PRPF6 Uncharacterized protein	protein from Gallus gallus	8.8e-205
BLAST match view associations BLAST with PRPF6 PRPF6 PRPF6 Pre-mRNA-processing factor 6	protein from Bos taurus	1.8e-204
BLAST match view associations BLAST with PRPF6 PRPF6 PRPF6 Uncharacterized protein	protein from Canis lupus familiaris	1.8e-204
BLAST match view associations BLAST with Prpf6 Prpf6 Prpf6 PRP6 pre-mRNA splicing factor 6 homolog (yeast)	protein from Mus musculus	3.8e-204
BLAST match view associations BLAST with Prpf6 Prpf6 Prpf6 pre-mRNA processing factor 6	gene from Rattus norvegicus	3.8e-204
BLAST match view associations BLAST with PRPF6 PRPF6 PRPF6 Pre-mRNA-processing factor 6	protein from Homo sapiens	4.9e-204
BLAST match view associations BLAST with I3L7Q4 I3L7Q4 I3L7Q4 Uncharacterized protein	protein from Sus scrofa	5.0e-203
BLAST match view associations BLAST with prpf6 prpf6 prpf6 pre-mRNA processing factor 6	gene from Dictyostelium discoideum	2.1e-180
BLAST match view associations BLAST with prp-6 prp-6 prp-6	gene from Caenorhabditis elegans	5.8e-163
BLAST match view associations BLAST with EMB2770 EMB2770 EMB2770 EMBRYO DEFECTIVE 2770	protein from Arabidopsis thaliana	1.6e-159
BLAST match view associations BLAST with orf19.6356 orf19.6356 orf19.6356	gene_product from Candida albicans	7.0e-74
BLAST match view associations BLAST with PRP6 PRP6 PRP6 Putative uncharacterized protein PRP6	protein from Candida albicans SC5314	7.0e-74
BLAST match view associations BLAST with PRP6 PRP6 PRP6 Splicing factor	gene from Saccharomyces cerevisiae	8.7e-70
BLAST match view associations BLAST with M03F8.3 M03F8.3 M03F8.3	gene from Caenorhabditis elegans	2.8e-14
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Crooked neck-like protein 1	protein from Homo sapiens	6.4e-12
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Crooked neck-like protein 1	protein from Homo sapiens	6.7e-12
BLAST match view associations BLAST with crnkl1 crnkl1 crnkl1 crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	gene_product from Danio rerio	2.1e-11
BLAST match view associations BLAST with AT3G13210 AT3G13210 AT3G13210	protein from Arabidopsis thaliana	6.8e-11
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Uncharacterized protein	protein from Canis lupus familiaris	1.0e-10
BLAST match view associations BLAST with Crnkl1 Crnkl1 Crnkl1 Crn, crooked neck-like 1 (Drosophila)	protein from Mus musculus	1.4e-10
BLAST match view associations BLAST with Crnkl1 Crnkl1 Crnkl1 crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	gene from Rattus norvegicus	1.4e-10
BLAST match view associations BLAST with HCF107 HCF107 HCF107 high chlorophyll fluorescent 107	protein from Arabidopsis thaliana	1.6e-10
BLAST match view associations BLAST with AT5G41770 AT5G41770 AT5G41770	protein from Arabidopsis thaliana	3.7e-10
BLAST match view associations BLAST with BGAL14 BGAL14 BGAL14 AT4G38590	protein from Arabidopsis thaliana	4.6e-10
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Uncharacterized protein	protein from Gallus gallus	7.4e-10
BLAST match view associations BLAST with DDB_G0280363 DDB_G0280363 DDB_G0280363	gene from Dictyostelium discoideum	1.2e-08
BLAST match view associations BLAST with crn crn crn crooked neck	protein from Drosophila melanogaster	1.6e-07
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Uncharacterized protein	protein from Bos taurus	6.2e-06
BLAST match view associations BLAST with DDB_G0278819 DDB_G0278819 DDB_G0278819 HAT repeat-containing protein	gene from Dictyostelium discoideum	9.8e-06
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Uncharacterized protein	protein from Canis lupus familiaris	4.0e-05
BLAST match view associations BLAST with AT3G51110 AT3G51110 AT3G51110	protein from Arabidopsis thaliana	5.2e-05
BLAST match view associations BLAST with AT5G45990 AT5G45990 AT5G45990	protein from Arabidopsis thaliana	0.00023
BLAST match view associations BLAST with prpf39 prpf39 prpf39 PRP39 pre-mRNA processing factor 39 homolog (yeast)	gene_product from Danio rerio	0.00056
BLAST match view associations BLAST with C50F2.3 C50F2.3 C50F2.3	gene from Caenorhabditis elegans	0.00058
BLAST match view associations BLAST with C50F2.3 C50F2.3 C50F2.3 Protein C50F2.3	protein from Caenorhabditis elegans	0.00058
BLAST match view associations BLAST with PRPF39 PRPF39 PRPF39 Uncharacterized protein	protein from Gallus gallus	0.00073
BLAST match view associations BLAST with orf19.332 orf19.332 orf19.332	gene_product from Candida albicans	0.00075
BLAST match view associations BLAST with CG1646 CG1646 CG1646	protein from Drosophila melanogaster	0.00077
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy3224
        (1278 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0036828 - symbol:CG6841 species:7227 "Drosophila m...  2455  5.2e-255  1
ZFIN|ZDB-GENE-030131-2575 - symbol:prpf6 "PRP6 pre-mRNA p...  2138  2.0e-221  1
UNIPROTKB|F1N9U0 - symbol:PRPF6 "Uncharacterized protein"...  1981  8.8e-205  1
UNIPROTKB|Q2KJJ0 - symbol:PRPF6 "Pre-mRNA-processing fact...  1978  1.8e-204  1
UNIPROTKB|E2RPW8 - symbol:PRPF6 "Uncharacterized protein"...  1978  1.8e-204  1
MGI|MGI:1922946 - symbol:Prpf6 "PRP6 pre-mRNA splicing fa...  1975  3.8e-204  1
RGD|1307103 - symbol:Prpf6 "PRP6 pre-mRNA processing fact...  1975  3.8e-204  1
UNIPROTKB|O94906 - symbol:PRPF6 "Pre-mRNA-processing fact...  1974  4.9e-204  1
UNIPROTKB|I3L7Q4 - symbol:PRPF6 "Uncharacterized protein"...  1666  5.0e-203  2
DICTYBASE|DDB_G0272374 - symbol:prpf6 "pre-mRNA processin...  1367  2.1e-180  2
POMBASE|SPBC6B1.07 - symbol:prp1 "U4/U6 x U5 tri-snRNP co...  1287  1.5e-164  2
WB|WBGene00013343 - symbol:prp-6 species:6239 "Caenorhabd...  1318  5.8e-163  2
TAIR|locus:2128751 - symbol:EMB2770 "EMBRYO DEFECTIVE 277...  1554  1.6e-159  1
ASPGD|ASPL0000068414 - symbol:AN7447 species:162425 "Emer...  1140  1.2e-115  1
CGD|CAL0001343 - symbol:orf19.6356 species:5476 "Candida ...   558  7.0e-74   2
UNIPROTKB|Q59PD7 - symbol:PRP6 "Putative uncharacterized ...   558  7.0e-74   2
SGD|S000000259 - symbol:PRP6 "Splicing factor" species:49...   511  8.7e-70   4
ASPGD|ASPL0000053069 - symbol:AN1259 species:162425 "Emer...   239  3.0e-16   1
WB|WBGene00019762 - symbol:M03F8.3 species:6239 "Caenorha...   164  2.8e-14   2
UNIPROTKB|Q5JY65 - symbol:CRNKL1 "Crooked neck-like prote...   161  6.4e-12   2
UNIPROTKB|Q9BZJ0 - symbol:CRNKL1 "Crooked neck-like prote...   161  6.7e-12   2
ZFIN|ZDB-GENE-040426-694 - symbol:crnkl1 "crooked neck pr...   195  2.1e-11   1
TAIR|locus:2089999 - symbol:AT3G13210 species:3702 "Arabi...   159  6.8e-11   2
UNIPROTKB|J9P5Z1 - symbol:CRNKL1 "Uncharacterized protein...   159  1.0e-10   2
MGI|MGI:1914127 - symbol:Crnkl1 "Crn, crooked neck-like 1...   158  1.4e-10   2
RGD|620507 - symbol:Crnkl1 "crooked neck pre-mRNA splicin...   158  1.4e-10   2
TAIR|locus:2086132 - symbol:HCF107 "high chlorophyll fluo...   186  1.6e-10   1
TAIR|locus:2152965 - symbol:AT5G41770 species:3702 "Arabi...   183  3.7e-10   1
TAIR|locus:2121214 - symbol:BGAL14 "beta-galactosidase 14...   124  4.6e-10   2
UNIPROTKB|F1P3Q8 - symbol:CRNKL1 "Uncharacterized protein...   162  7.4e-10   2
DICTYBASE|DDB_G0280363 - symbol:DDB_G0280363 species:4468...   188  1.2e-08   2
FB|FBgn0000377 - symbol:crn "crooked neck" species:7227 "...   134  1.6e-07   2
POMBASE|SPBC31F10.11c - symbol:cwf4 "complexed with Cdc5 ...   143  2.4e-06   3
UNIPROTKB|F1MZT2 - symbol:CRNKL1 "Uncharacterized protein...   153  6.2e-06   2
DICTYBASE|DDB_G0278819 - symbol:DDB_G0278819 "HAT repeat-...   142  9.8e-06   1
UNIPROTKB|F1PYE9 - symbol:CRNKL1 "Uncharacterized protein...   137  4.0e-05   1
TAIR|locus:2080853 - symbol:AT3G51110 species:3702 "Arabi...   132  5.2e-05   1
TAIR|locus:2161363 - symbol:AT5G45990 species:3702 "Arabi...   129  0.00023   1
ZFIN|ZDB-GENE-030616-420 - symbol:prpf39 "PRP39 pre-mRNA ...   126  0.00056   1
WB|WBGene00016837 - symbol:C50F2.3 species:6239 "Caenorha...    96  0.00058   3
UNIPROTKB|P91175 - symbol:C50F2.3 "Protein C50F2.3" speci...    96  0.00058   3
POMBASE|SPBC211.02c - symbol:cwf3 "complexed with Cdc5 pr...    93  0.00072   3
UNIPROTKB|E1C8G8 - symbol:PRPF39 "Uncharacterized protein...   124  0.00073   1
CGD|CAL0004743 - symbol:orf19.332 species:5476 "Candida a...   128  0.00075   2
FB|FBgn0039600 - symbol:CG1646 species:7227 "Drosophila m...    99  0.00077   2


>FB|FBgn0036828 [details] [associations]
            symbol:CG6841 species:7227 "Drosophila melanogaster"
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
            [GO:0005684 "U2-type spliceosomal complex" evidence=ISS]
            [GO:0005682 "U5 snRNP" evidence=ISS] [GO:0030532 "small nuclear
            ribonucleoprotein complex" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IC] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IMP] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
            evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR003107 InterPro:IPR010491 InterPro:IPR011990
            InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293 SMART:SM00386
            EMBL:AE014296 GO:GO:0022008 GO:GO:0005682 Gene3D:1.25.40.10
            GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0000381 KO:K12855
            OMA:IWLRAAY InterPro:IPR027108 PANTHER:PTHR11246:SF1
            GeneTree:ENSGT00550000075016 FlyBase:FBgn0036828 EMBL:BT021415
            RefSeq:NP_649073.1 UniGene:Dm.11665 SMR:Q9VVU6 MINT:MINT-316737
            STRING:Q9VVU6 EnsemblMetazoa:FBtr0075068 GeneID:40064
            KEGG:dme:Dmel_CG6841 UCSC:CG6841-RA InParanoid:Q9VVU6
            GenomeRNAi:40064 NextBio:816818 Uniprot:Q9VVU6
        Length = 931

 Score = 2455 (869.3 bits), Expect = 5.2e-255, P = 5.2e-255
 Identities = 482/680 (70%), Positives = 544/680 (80%)

Query:   226 LVNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPV-KRKKKX 284
             + NRNKKHF+GVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHA P  KRKKK 
Sbjct:     9 IANRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPATKRKKKD 68

Query:   285 XXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXX 344
                               GY GSLF+KDPYDKDDEEAD IY+ ID               
Sbjct:    69 EEEEEDEDLNDSNYDEFSGYSGSLFSKDPYDKDDEEADAIYDSIDKRMDEKRKEYRDRRL 128

Query:   345 XXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFTPLPD 404
                        PKIQQQFSDLKR L +V+ +EW  +PEVGD+RNRKQRNPRAEKFTPLPD
Sbjct:   129 REDLERYRQERPKIQQQFSDLKRSLASVTSEEWSTIPEVGDSRNRKQRNPRAEKFTPLPD 188

Query:   405 SVLRGNLGGESTGAIDPNSGLMSQIPGTATPGMLTPSGDLDLRKMGQARNTLMNVKLNQI 464
             S++  NLGGES+  +DP+SGL S +PG ATPGMLTP+GDLDLRK+GQARNTLMNVKL+Q+
Sbjct:   189 SLISRNLGGESSSTLDPSSGLASMVPGVATPGMLTPTGDLDLRKIGQARNTLMNVKLSQV 248

Query:   465 SDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARL 524
             SDSV GQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARL
Sbjct:   249 SDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARL 308

Query:   525 EEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIK 584
             EEVTGKVQ ARNLIM+GCE N  SEDLWLEAARLQP DTA+AVIAQA RHIPTSVRIWIK
Sbjct:   309 EEVTGKVQMARNLIMRGCEMNIQSEDLWLEAARLQPPDTAKAVIAQAARHIPTSVRIWIK 368

Query:   585 AADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWL 644
             AADLE+ETKAKRRV+RKALEHIPNSVRLWKAAVELE+P+DARILLSRAVECC TSVELWL
Sbjct:   369 AADLESETKAKRRVFRKALEHIPNSVRLWKAAVELENPDDARILLSRAVECCNTSVELWL 428

Query:   645 ALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANG 704
             ALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEA+GN  MV+KIIDR+L+SL+ NG
Sbjct:   429 ALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEANGNIHMVEKIIDRSLTSLTVNG 488

Query:   705 VEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYEC 764
             VEINR+ WF+EAIEAEK+G+V+ CQ++++A+IG GVE+EDRK TW++DAE CA + A+EC
Sbjct:   489 VEINRDQWFQEAIEAEKSGAVNCCQSIVKAVIGIGVEEEDRKQTWIDDAEFCAKENAFEC 548

Query:   765 ARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSN 824
             ARA+YA AL  FPSKKSIWLRAAYFEKNHGTRESLE LLQ+AVAHCPKSE+LWLMGAKS 
Sbjct:   549 ARAVYAHALQIFPSKKSIWLRAAYFEKNHGTRESLEALLQRAVAHCPKSEILWLMGAKSK 608

Query:   825 KKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILS 884
                 W+         G   +   +L  A    P SE +WL   K +    +   AR +L+
Sbjct:   609 ----WMA--------GDVPAARGILSLAFQANPNSEDIWLAAVKLESENSEYERARRLLA 656

Query:   885 LAFQANPNSEEIWLAAVKLE 904
              A  + P +  + + + +LE
Sbjct:   657 KARGSAP-TPRVMMKSARLE 675

 Score = 968 (345.8 bits), Expect = 3.9e-140, Sum P(2) = 3.9e-140
 Identities = 236/580 (40%), Positives = 318/580 (54%)

Query:   591 ETKAKRRVYRKALEHIPNSVRLWKAAVELEDP----EDARILLSRAVECCPTSVELWLAL 646
             + K  R + +   E  PN    W A+  LE+     + AR L+ R  E    S +LWL  
Sbjct:   280 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLWLEA 339

Query:   647 ARLETYENARKVLNKARENIPTDRQIWTTAAKLE-EAHGNNAMVDKIIDRALSSLSANGV 705
             ARL+  + A+ V+ +A  +IPT  +IW  AA LE E      +  K ++   +S+     
Sbjct:   340 ARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLESETKAKRRVFRKALEHIPNSVRLWKA 399

Query:   706 EINREHWFKEAIEAEKAGSVHTCQALIR---AIIGYGVEQEDRK--HTWME----DAESC 756
              +  E+     I   +A  V  C   +    A+      +  RK  +   E    D +  
Sbjct:   400 AVELENPDDARILLSRA--VECCNTSVELWLALARLETYENARKVLNKARENIPTDRQIW 457

Query:   757 ANQGAYECARA-IYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEV 815
                   E A   I+        S  S+ +      ++   +E++E     AV +C +S V
Sbjct:   458 TTAAKLEEANGNIHMVEKIIDRSLTSLTVNGVEINRDQWFQEAIEAEKSGAV-NCCQSIV 516

Query:   816 LWLMGA---KSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWL 872
               ++G    + ++K  W+  A F       E    +   A+   P  + +WL  A  +  
Sbjct:   517 KAVIGIGVEEEDRKQTWIDDAEFCAKENAFECARAVYAHALQIFPSKKSIWLRAAYFEKN 576

Query:   873 AGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPN 932
              G   +   +L  A    P SE +WL   K +    +                    NPN
Sbjct:   577 HGTRESLEALLQRAVAHCPKSEILWLMGAKSKWMAGDVPAARGILSLAFQA------NPN 630

Query:   933 SEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDE 992
             SE+IWLAAVKLESEN+EYE           SAPTPRVM++SA+LEW L+  + AL+LL+E
Sbjct:   631 SEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDEALRLLEE 690

Query:   993 AIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLI 1052
             A++VFPDF KLWMMKGQIEEQ+   D A  T++  +KKCP S+PLWI+ ANLEER+ +L 
Sbjct:   691 AVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLKKCPTSIPLWILSANLEERKGVLT 750

Query:  1053 KARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFL 1112
             KARS+LE+GRLRNP  A LWL AIRVE+RAGLK+IA+TMMA+ALQECPNAG LWAEAIF+
Sbjct:   751 KARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTMMARALQECPNAGELWAEAIFM 810

Query:  1113 EPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKC 1152
             E +PQRKTKSVDALKKCEHDPHVLLAVSKLFW E+K  KC
Sbjct:   811 ETKPQRKTKSVDALKKCEHDPHVLLAVSKLFWSEHKFSKC 850

 Score = 639 (230.0 bits), Expect = 6.5e-100, Sum P(2) = 6.5e-100
 Identities = 206/697 (29%), Positives = 320/697 (45%)

Query:   618 ELEDPEDARILLSRAVECCPTSVELWLALARLETY----ENARKVLNKARE-NIPTDRQI 672
             ++ D + AR+LL    E  P     W+A ARLE      + AR ++ +  E NI ++  +
Sbjct:   277 DINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSE-DL 335

Query:   673 WTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEA-IEAEKAGSVHTCQAL 731
             W  AA+L+      A    +I +A   +  + V I    W K A +E+E        + +
Sbjct:   336 WLEAARLQPPDTAKA----VIAQAARHIPTS-VRI----WIKAADLESETKAK----RRV 382

Query:   732 IRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEK 791
              R  + + +    R   W    E   N    + AR + ++A+    +   +WL  A  E 
Sbjct:   383 FRKALEH-IPNSVR--LWKAAVE-LENP---DDARILLSRAVECCNTSVELWLALARLE- 434

Query:   792 NHGTRESLETLLQKAVAHCPKSEVLWLMGAK---SN------KK-------SIWLRAAYF 835
                T E+   +L KA  + P    +W   AK   +N      +K       S+ +     
Sbjct:   435 ---TYENARKVLNKARENIPTDRQIWTTAAKLEEANGNIHMVEKIIDRSLTSLTVNGVEI 491

Query:   836 EKNHGTRESLETLLQKAVAHCPKSEVLWLMGA-------KSKWLA-GDVPAARGILSLAF 887
              ++   +E++E     AV +C +S V  ++G        K  W+   +  A       A 
Sbjct:   492 NRDQWFQEAIEAEKSGAV-NCCQSIVKAVIGIGVEEEDRKQTWIDDAEFCAKENAFECAR 550

Query:   888 QANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN-PNSEEIWLAAVKLESE 946
                 ++ +I+ +   +      +E                  + P SE +WL   K +  
Sbjct:   551 AVYAHALQIFPSKKSIWLRAAYFEKNHGTRESLEALLQRAVAHCPKSEILWLMGAKSKWM 610

Query:   947 NNEYEXXXXXXXXXXXSAPTPR-VMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWM 1005
               +             + P    + + + KLE      ERA +LL +A    P   ++ M
Sbjct:   611 AGDVPAARGILSLAFQANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPT-PRVMM 669

Query:  1006 MKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRN 1065
                ++E      D+A     +A++  P    LW+M   +EE+++    A +    G  + 
Sbjct:   670 KSARLEWALEKFDEALRLLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLKKC 729

Query:  1066 PNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPRPQRK----TK 1121
             P    LW+ +  +E R G+   A +++ +     P   +LW EAI +E R   K    T 
Sbjct:   730 PTSIPLWILSANLEERKGVLTKARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTM 789

Query:  1122 SVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVL 1181
                AL++C   P+     ++  + E K Q+            KTKSVDALKKCEHDPHVL
Sbjct:   790 MARALQEC---PNAGELWAEAIFMETKPQR------------KTKSVDALKKCEHDPHVL 834

Query:  1182 LAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAA 1241
             LAVSKLFW E+K  KCR+WFNRTVKIDPDLGDAWAYFYKFE+++GTE  Q EV  RC++A
Sbjct:   835 LAVSKLFWSEHKFSKCRDWFNRTVKIDPDLGDAWAYFYKFELLHGTEAQQQEVLDRCISA 894

Query:  1242 EPKHGENWCRVAKNVSNWKLPRETILSLVAKDLPIPI 1278
             EP HGE+WCRV+KN+ NW+     +L  V ++L IPI
Sbjct:   895 EPTHGESWCRVSKNIQNWQFKTPEVLRAVVRELSIPI 931

 Score = 424 (154.3 bits), Expect = 3.9e-140, Sum P(2) = 3.9e-140
 Identities = 88/153 (57%), Positives = 95/153 (62%)

Query:    63 KHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPV-KRKKKXXXXXXX 121
             KHF+GVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHA P  KRKKK       
Sbjct:    15 KHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPATKRKKKDEEEEED 74

Query:   122 XXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXX 181
                         GY GSLF+KDPYDKDDEEAD IY+ ID                     
Sbjct:    75 EDLNDSNYDEFSGYSGSLFSKDPYDKDDEEADAIYDSIDKRMDEKRKEYRDRRLREDLER 134

Query:   182 XXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQV 214
                  PKIQQQFSDLKR L +V+ +EW    +V
Sbjct:   135 YRQERPKIQQQFSDLKRSLASVTSEEWSTIPEV 167

 Score = 194 (73.4 bits), Expect = 7.7e-116, Sum P(2) = 7.7e-116
 Identities = 40/53 (75%), Positives = 42/53 (79%)

Query:    24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
             V GQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKS        P  ++A
Sbjct:   252 VTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIA 304

 Score = 168 (64.2 bits), Expect = 3.4e-48, Sum P(2) = 3.4e-48
 Identities = 54/228 (23%), Positives = 99/228 (43%)

Query:   501 RLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQP 560
             RLL ++V E  P+ P  W+   ++EE   +   A      G ++  TS  LW+ +A L+ 
Sbjct:   686 RLLEEAV-EVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLKKCPTSIPLWILSANLEE 744

Query:   561 ----VDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKR---RVYRKALEHIPNSVRLW 613
                 +  AR+++ +     P    +W++A  +E     K     +  +AL+  PN+  LW
Sbjct:   745 RKGVLTKARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTMMARALQECPNAGELW 804

Query:   614 KAAVELEDPEDARILLSRAVECCPTSVELWLALARL----ETYENARKVLNKARENIPTD 669
               A+ +E     +     A++ C     + LA+++L      +   R   N+  +  P  
Sbjct:   805 AEAIFMETKPQRKTKSVDALKKCEHDPHVLLAVSKLFWSEHKFSKCRDWFNRTVKIDPDL 864

Query:   670 RQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANG-----VEINREHW 712
                W    K E  HG  A   +++DR +S+   +G     V  N ++W
Sbjct:   865 GDAWAYFYKFELLHGTEAQQQEVLDRCISAEPTHGESWCRVSKNIQNW 912

 Score = 167 (63.8 bits), Expect = 4.3e-48, Sum P(2) = 4.3e-48
 Identities = 52/200 (26%), Positives = 88/200 (44%)

Query:   496 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEA 555
             D+  AR +L    + NPN    W+A+ +LE    + + AR L+ K      T   + +++
Sbjct:   613 DVPAARGILSLAFQANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPR-VMMKS 671

Query:   556 ARLQ----PVDTARAVIAQAVRHIPTSVRIWIKAADLETE---TKAKRRVYRKALEHIPN 608
             ARL+      D A  ++ +AV   P   ++W+    +E +   T      Y   L+  P 
Sbjct:   672 ARLEWALEKFDEALRLLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLKKCPT 731

Query:   609 SVRLWKAAVELEDPED----ARILLSRAVECCPTSVELWLALARLETY----ENARKVLN 660
             S+ LW  +  LE+ +     AR +L R     P    LWL   R+E      E A  ++ 
Sbjct:   732 SIPLWILSANLEERKGVLTKARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTMMA 791

Query:   661 KARENIPTDRQIWTTAAKLE 680
             +A +  P   ++W  A  +E
Sbjct:   792 RALQECPNAGELWAEAIFME 811

 Score = 84 (34.6 bits), Expect = 2.3e-39, Sum P(2) = 2.3e-39
 Identities = 34/159 (21%), Positives = 66/159 (41%)

Query:   497 IKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAA 556
             + KAR +L+  R  NP     W+ + R+E   G  + A  ++ +  +E   + +LW EA 
Sbjct:   749 LTKARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTMMARALQECPNAGELWAEAI 808

Query:   557 RLQ--PVDTARAVIA-QAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLW 613
              ++  P    ++V A +   H P  +    K    E +    R  + + ++  P+    W
Sbjct:   809 FMETKPQRKTKSVDALKKCEHDPHVLLAVSKLFWSEHKFSKCRDWFNRTVKIDPDLGDAW 868

Query:   614 KAAVELE----DPEDARILLSRAVECCPTSVELWLALAR 648
                 + E         + +L R +   PT  E W  +++
Sbjct:   869 AYFYKFELLHGTEAQQQEVLDRCISAEPTHGESWCRVSK 907


>ZFIN|ZDB-GENE-030131-2575 [details] [associations]
            symbol:prpf6 "PRP6 pre-mRNA processing factor 6
            homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0005634
            "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IEA] [GO:0006396 "RNA processing"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            InterPro:IPR003107 InterPro:IPR010491 InterPro:IPR011990
            InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293 SMART:SM00386
            ZFIN:ZDB-GENE-030131-2575 GO:GO:0005634 Gene3D:1.25.40.10
            GO:GO:0000398 KO:K12855 InterPro:IPR027108 PANTHER:PTHR11246:SF1
            CTD:24148 HOVERGEN:HBG023330 EMBL:BC056710 IPI:IPI00484708
            RefSeq:NP_997820.1 UniGene:Dr.150395 ProteinModelPortal:Q6PH55
            STRING:Q6PH55 GeneID:323855 KEGG:dre:323855 InParanoid:Q6PH55
            NextBio:20808461 ArrayExpress:Q6PH55 Bgee:Q6PH55 Uniprot:Q6PH55
        Length = 944

 Score = 2138 (757.7 bits), Expect = 2.0e-221, P = 2.0e-221
 Identities = 435/691 (62%), Positives = 516/691 (74%)

Query:   227 VNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR----KK 282
             +N+ KK F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND  DDRHA P KR    + 
Sbjct:    11 LNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM 70

Query:   283 KXXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXX 342
             K                   GY GSLF+  PY+KDDEEAD IY  +D             
Sbjct:    71 KKSQDDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREL 130

Query:   343 XXXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFTPL 402
                          PKIQQQFSDLKR L  V+ DEW ++PEVGDARN++QRNPR EK TP+
Sbjct:   131 REKEEIEKYRMERPKIQQQFSDLKRKLSEVTEDEWLSIPEVGDARNKRQRNPRYEKLTPV 190

Query:   403 PDSVLRGNLG-GESTGAIDPNSG----LMSQIPG---TATPGMLTP-SGDLDLRKMGQAR 453
             PDS    +L  GE+  ++DP  G    L +  PG   T  PG +TP +G+LD+RK+GQAR
Sbjct:   191 PDSFFAKHLQTGENHTSVDPLQGQFGGLNTPFPGVLNTPYPGGMTPDAGELDMRKIGQAR 250

Query:   454 NTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPN 513
             NTLM+++L+Q+SDSV GQTVVDPKGYLTDL SMIPTYGGDI+DIKKARLLLKSVRETNP+
Sbjct:   251 NTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTYGGDISDIKKARLLLKSVRETNPH 310

Query:   514 HPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVR 573
             HPPAWIASARLEEVTGK+Q ARNLIMKG E    SED+WLEAARLQP DTA+AV+AQAVR
Sbjct:   311 HPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVR 370

Query:   574 HIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRAV 633
             H+P SVRI+I+AA+LET+ +AK+RV RKALE++  SVRLWK AVELE+PEDARI+LSRAV
Sbjct:   371 HLPQSVRIYIRAAELETDIRAKKRVLRKALENVSKSVRLWKTAVELEEPEDARIMLSRAV 430

Query:   634 ECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKII 693
             ECCPTSVELWLALARLETYENAR+VLNKARENIPTDR IW TAAKLEEA+GN  MV+KII
Sbjct:   431 ECCPTSVELWLALARLETYENARRVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKII 490

Query:   694 DRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDA 753
             DRA++SL ANGVEINRE W ++A E +KAGSV TCQ++IRA+IG G+E+ED KHTWMEDA
Sbjct:   491 DRAITSLRANGVEINREQWIQDAEECDKAGSVVTCQSVIRAVIGIGIEEEDCKHTWMEDA 550

Query:   754 ESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKS 813
             +SC + GA ECARAIYA AL  FPSKKS+WLRAAYFEKN+GTRESLE LLQ+AVAHCPK+
Sbjct:   551 DSCVSHGALECARAIYAHALQVFPSKKSVWLRAAYFEKNNGTRESLEALLQRAVAHCPKA 610

Query:   814 EVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLA 873
             EVLWLMGAKS     WL         G   +  ++L  A    P SE +WL   K +   
Sbjct:   611 EVLWLMGAKSK----WLA--------GDVPAARSILALAFQANPNSEEIWLAAVKLESEN 658

Query:   874 GDVPAARGILSLAFQANPNSEEIWLAAVKLE 904
              +   AR +L+ A  + P +  +++ +V+LE
Sbjct:   659 NEYERARRLLAKARSSAPTAR-VFMKSVRLE 688

 Score = 899 (321.5 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
 Identities = 219/586 (37%), Positives = 312/586 (53%)

Query:   590 TETKAKRRVYRKALEHIPNSVRLWKAAVELEDP----EDARILLSRAVECCPTSVELWLA 645
             ++ K  R + +   E  P+    W A+  LE+     + AR L+ +  E CP S ++WL 
Sbjct:   292 SDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLE 351

Query:   646 LARLETYENARKVLNKARENIPTDRQIWTTAAKLE-EAHGNNAMVDKIIDRALSS--LSA 702
              ARL+  + A+ V+ +A  ++P   +I+  AA+LE +      ++ K ++    S  L  
Sbjct:   352 AARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALENVSKSVRLWK 411

Query:   703 NGVEINREH----WFKEAIEAEKAGSVHTCQALIRA--------IIGYGVEQ--EDRKHT 748
               VE+            A+E     SV    AL R         ++    E    DR H 
Sbjct:   412 TAVELEEPEDARIMLSRAVECCPT-SVELWLALARLETYENARRVLNKARENIPTDR-HI 469

Query:   749 WMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVA 808
             W+  A+     G  +    I  +A+       S+        +    +++ E     +V 
Sbjct:   470 WITAAKLEEANGNTQMVEKIIDRAIT------SLRANGVEINREQWIQDAEECDKAGSVV 523

Query:   809 HCPKSEVLWLMGA---KSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLM 865
              C +S +  ++G    + + K  W+  A    +HG  E    +   A+   P  + +WL 
Sbjct:   524 TC-QSVIRAVIGIGIEEEDCKHTWMEDADSCVSHGALECARAIYAHALQVFPSKKSVWLR 582

Query:   866 GAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXX 925
              A  +   G   +   +L  A    P +E +WL   K +    +                
Sbjct:   583 AAYFEKNNGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQA-- 640

Query:   926 XXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLER 985
                 NPNSEEIWLAAVKLESENNEYE           SAPT RV ++S +LEW L N+E 
Sbjct:   641 ----NPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVRLEWVLGNIEA 696

Query:   986 ALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLE 1045
             A +L  EA+K + DF KLWMM+GQIEEQ   +D+A + ++Q +KKCPHS+ LW++L+ LE
Sbjct:   697 AHELCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYNQGLKKCPHSMSLWLLLSRLE 756

Query:  1046 ERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGIL 1105
             E+   L +AR++LEK RL+NP   ELWL ++R+E RAGLK+IANT+MAKALQECPN+GIL
Sbjct:   757 EKVGQLTRARAILEKARLKNPQSPELWLESVRLEYRAGLKNIANTLMAKALQECPNSGIL 816

Query:  1106 WAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQK 1151
             W+EA+FLE RPQRKTKSVDALKKCEHDPHVLLAV+KLFW E K  K
Sbjct:   817 WSEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITK 862

 Score = 623 (224.4 bits), Expect = 3.5e-90, Sum P(2) = 3.5e-90
 Identities = 204/691 (29%), Positives = 319/691 (46%)

Query:   618 ELEDPEDARILLSRAVECCPTSVELWLALARLETYEN----ARKVLNKARENIPTDRQIW 673
             ++ D + AR+LL    E  P     W+A ARLE        AR ++ K  E  P    +W
Sbjct:   290 DISDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW 349

Query:   674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIR 733
               AA+L+   G+ A    ++ +A+  L  + V I     +  A E E    +   + ++R
Sbjct:   350 LEAARLQP--GDTAKA--VVAQAVRHLPQS-VRI-----YIRAAELET--DIRAKKRVLR 397

Query:   734 AIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNH 793
               +   V +  R   W    ++       E AR + ++A+   P+   +WL  A  E   
Sbjct:   398 KALE-NVSKSVR--LW----KTAVELEEPEDARIMLSRAVECCPTSVELWLALARLE--- 447

Query:   794 GTRESLETLLQKAVAHCPKSEVLWLMGAKSNK--------KSIWLRAAYFEKNHGTRESL 845
              T E+   +L KA  + P    +W+  AK  +        + I  RA    + +G   + 
Sbjct:   448 -TYENARRVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR 506

Query:   846 ETLLQKAVAHCPK--------SEVLWLMG-------AKSKWLA-GDVPAARGILSLAFQA 889
             E  +Q A   C K        S +  ++G        K  W+   D   + G L  A   
Sbjct:   507 EQWIQDA-EECDKAGSVVTCQSVIRAVIGIGIEEEDCKHTWMEDADSCVSHGALECARAI 565

Query:   890 NPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN-PNSEEIWLAAVKLESENN 948
               ++ +++ +   +      +E                  + P +E +WL   K +    
Sbjct:   566 YAHALQVFPSKKSVWLRAAYFEKNNGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAG 625

Query:   949 EYEXXXXXXXXXXXSAP-TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMK 1007
             +             + P +  + + + KLE   +  ERA +LL +A    P  A+++M  
Sbjct:   626 DVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT-ARVFMKS 684

Query:  1008 GQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPN 1067
              ++E     ++ AH+  ++A+K       LW+M   +EE+ + + +AR    +G  + P+
Sbjct:   685 VRLEWVLGNIEAAHELCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYNQGLKKCPH 744

Query:  1068 CAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPRPQRK----TKSV 1123
                LWL   R+E + G    A  ++ KA  + P +  LW E++ LE R   K    T   
Sbjct:   745 SMSLWLLLSRLEEKVGQLTRARAILEKARLKNPQSPELWLESVRLEYRAGLKNIANTLMA 804

Query:  1124 DALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLLA 1183
              AL++C   P+  +  S+  + E + Q+            KTKSVDALKKCEHDPHVLLA
Sbjct:   805 KALQEC---PNSGILWSEAVFLEARPQR------------KTKSVDALKKCEHDPHVLLA 849

Query:  1184 VSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAEP 1243
             V+KLFW E K  K REWF RTVKI+PDLGDAW +FYKFE+ +GTEE Q EVKKRC  AEP
Sbjct:   850 VAKLFWSERKITKAREWFLRTVKIEPDLGDAWGFFYKFELQHGTEEQQHEVKKRCENAEP 909

Query:  1244 KHGENWCRVAKNVSNWKLPRETILSLVAKDL 1274
             +HGE WC  +K++ NW+     IL LVA  +
Sbjct:   910 RHGELWCAESKHILNWQKNIGEILVLVASKI 940

 Score = 352 (129.0 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
 Identities = 80/162 (49%), Positives = 90/162 (55%)

Query:    61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR----KKKXX 116
             K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND  DDRHA P KR    + K  
Sbjct:    14 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKS 73

Query:   117 XXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXX 176
                              GY GSLF+  PY+KDDEEAD IY  +D                
Sbjct:    74 QDDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERRELREK 133

Query:   177 XXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQA 218
                       PKIQQQFSDLKR L  V+ DEW +  +V G A
Sbjct:   134 EEIEKYRMERPKIQQQFSDLKRKLSEVTEDEWLSIPEV-GDA 174

 Score = 182 (69.1 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
 Identities = 38/53 (71%), Positives = 41/53 (77%)

Query:    24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
             V GQTVVDPKGYLTDL SMIPTYGGDI+DIKKARLLLKS        P  ++A
Sbjct:   265 VSGQTVVDPKGYLTDLNSMIPTYGGDISDIKKARLLLKSVRETNPHHPPAWIA 317

 Score = 167 (63.8 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
 Identities = 54/197 (27%), Positives = 88/197 (44%)

Query:   495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
             N+ ++AR LL   R + P     ++ S RLE V G ++AA  L  +  +  +    LW+ 
Sbjct:   659 NEYERARRLLAKARSSAPT-ARVFMKSVRLEWVLGNIEAAHELCTEALKHYEDFPKLWMM 717

Query:   555 AARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETE----TKAKRRVYRKALEHI 606
               +++     +D AR    Q ++  P S+ +W+  + LE +    T+A R +  KA    
Sbjct:   718 RGQIEEQSESIDRAREAYNQGLKKCPHSMSLWLLLSRLEEKVGQLTRA-RAILEKARLKN 776

Query:   607 PNSVRLWKAAVELEDPED----ARILLSRAVECCPTSVELWLALARLETYENARKVLNKA 662
             P S  LW  +V LE        A  L+++A++ CP S  LW     LE     +     A
Sbjct:   777 PQSPELWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSVDA 836

Query:   663 RENIPTDRQIWTTAAKL 679
              +    D  +    AKL
Sbjct:   837 LKKCEHDPHVLLAVAKL 853

 Score = 159 (61.0 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
 Identities = 59/225 (26%), Positives = 98/225 (43%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             + +I+ A  L     +   + P  W+   ++EE +  +  AR    +G ++   S  LWL
Sbjct:   691 LGNIEAAHELCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYNQGLKKCPHSMSLWL 750

Query:   554 EAARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKR---RVYRKALEHI 606
               +RL+     +  ARA++ +A    P S  +W+++  LE     K     +  KAL+  
Sbjct:   751 LLSRLEEKVGQLTRARAILEKARLKNPQSPELWLESVRLEYRAGLKNIANTLMAKALQEC 810

Query:   607 PNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARE-- 664
             PNS  LW  AV LE     +     A++ C     + LA+A+L  + + RK+  KARE  
Sbjct:   811 PNSGILWSEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKL--FWSERKI-TKAREWF 867

Query:   665 ----NIPTDR-QIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANG 704
                  I  D    W    K E  HG      ++  R  ++   +G
Sbjct:   868 LRTVKIEPDLGDAWGFFYKFELQHGTEEQQHEVKKRCENAEPRHG 912

 Score = 138 (53.6 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
 Identities = 51/194 (26%), Positives = 86/194 (44%)

Query:   497 IKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAA 556
             I +AR       +  P+    W+  +RLEE  G++  AR ++ K   +N  S +LWLE+ 
Sbjct:   728 IDRAREAYNQGLKKCPHSMSLWLLLSRLEEKVGQLTRARAILEKARLKNPQSPELWLESV 787

Query:   557 RLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYR--KALEHIPNSV 610
             RL+      + A  ++A+A++  P S  +W +A  LE   + K +     K  EH P+ V
Sbjct:   788 RLEYRAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSVDALKKCEHDPH-V 846

Query:   611 RLWKAAVELEDPE--DARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARE 664
              L  A +   + +   AR    R V+  P   + W    + E    T E   +V  +   
Sbjct:   847 LLAVAKLFWSERKITKAREWFLRTVKIEPDLGDAWGFFYKFELQHGTEEQQHEVKKRCEN 906

Query:   665 NIPTDRQIWTTAAK 678
               P   ++W   +K
Sbjct:   907 AEPRHGELWCAESK 920

 Score = 113 (44.8 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
 Identities = 41/175 (23%), Positives = 69/175 (39%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             +  + +AR +L+  R  NP  P  W+ S RLE   G    A  L+ K  +E   S  LW 
Sbjct:   759 VGQLTRARAILEKARLKNPQSPELWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWS 818

Query:   554 EAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL---ETETKAKRRVYRKALEHIPNSV 610
             EA  L+     +     A++       + +  A L   E +    R  + + ++  P+  
Sbjct:   819 EAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFLRTVKIEPDLG 878

Query:   611 RLW----KAAVELEDPEDARILLSRAVECCPTSVELWLALAR--LETYENARKVL 659
               W    K  ++    E    +  R     P   ELW A ++  L   +N  ++L
Sbjct:   879 DAWGFFYKFELQHGTEEQQHEVKKRCENAEPRHGELWCAESKHILNWQKNIGEIL 933


>UNIPROTKB|F1N9U0 [details] [associations]
            symbol:PRPF6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005682 "U5 snRNP"
            evidence=IEA] [GO:0006403 "RNA localization" evidence=IEA]
            [GO:0043021 "ribonucleoprotein complex binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0046540 "U4/U6 x U5
            tri-snRNP complex" evidence=IEA] [GO:0050681 "androgen receptor
            binding" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            InterPro:IPR003107 InterPro:IPR010491 InterPro:IPR011990
            InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293 SMART:SM00386
            GO:GO:0045944 GO:GO:0005682 GO:GO:0003723 GO:GO:0003713
            Gene3D:1.25.40.10 GO:GO:0043021 GO:GO:0000398 GO:GO:0071013
            GO:GO:0046540 GO:GO:0006403 GO:GO:0071001 OMA:IWLRAAY
            InterPro:IPR027108 PANTHER:PTHR11246:SF1
            GeneTree:ENSGT00550000075016 EMBL:AADN02019178 EMBL:AADN02019179
            EMBL:AADN02019180 IPI:IPI00589966 Ensembl:ENSGALT00000009656
            Uniprot:F1N9U0
        Length = 945

 Score = 1981 (702.4 bits), Expect = 8.8e-205, P = 8.8e-205
 Identities = 398/616 (64%), Positives = 470/616 (76%)

Query:   303 GYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQF 362
             GY GSLF+  PY+KDDEEAD IY  +D                          PKIQQQF
Sbjct:    87 GYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQF 146

Query:   363 SDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFTPLPDSVLRGNL-GGESTGAIDP 421
             SDLKR L  V+ +EW ++PEVGDARN++QRNPR EK TP+PDS    +L  GE+  ++DP
Sbjct:   147 SDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQSGENHTSVDP 206

Query:   422 NS------------GLMSQIPGTATPGMLTP-SGDLDLRKMGQARNTLMNVKLNQISDSV 468
                           GL +  PG  TPG++TP +G+LD+RK+GQARNTLM+++L+Q+SDSV
Sbjct:   207 RQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSV 266

Query:   469 VGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVT 528
              GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKSVRETNP+HPPAWIASARLEEVT
Sbjct:   267 SGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVT 326

Query:   529 GKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL 588
             GK+Q ARNLIMKG E    SED+WLEAARLQP DTA+AV+AQAVRH+P SVRI+I+AA+L
Sbjct:   327 GKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAEL 386

Query:   589 ETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALAR 648
             ET+ +AK+RV RKALEH+PNSVRLWKAAVELE+PEDARI+LSRAVECCPTSVELWLALAR
Sbjct:   387 ETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALAR 446

Query:   649 LETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEIN 708
             LETYENARKVLNKARENIPTDR IW TAAKLEEA+GN  MV+KIIDRA++SL ANGVEIN
Sbjct:   447 LETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEIN 506

Query:   709 REHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAI 768
             RE W ++A E +KAGSV TCQA++RA+IG G+E+EDRKHTWMEDA+SC    A ECARAI
Sbjct:   507 REQWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAI 566

Query:   769 YAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSI 828
             YA AL  FPSKKS+WLRAAYFEKNHGTRESLE LLQ+AVAHCPK+EVLWLMGAKS     
Sbjct:   567 YAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK---- 622

Query:   829 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ 888
             WL         G   +  ++L  A    P SE +WL   K +    +   AR +L+ A  
Sbjct:   623 WLA--------GDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARS 674

Query:   889 ANPNSEEIWLAAVKLE 904
             + P +  +++ +VKLE
Sbjct:   675 SAPTAR-VFMKSVKLE 689

 Score = 912 (326.1 bits), Expect = 4.5e-129, Sum P(3) = 4.5e-129
 Identities = 225/603 (37%), Positives = 320/603 (53%)

Query:   591 ETKAKRRVYRKALEHIPNSVRLWKAAVELEDP----EDARILLSRAVECCPTSVELWLAL 646
             + K  R + +   E  P+    W A+  LE+     + AR L+ +  E CP S ++WL  
Sbjct:   294 DIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEA 353

Query:   647 ARLETYENARKVLNKARENIPTDRQIWTTAAKLE-EAHGNNAMVDKIIDRALSS--LSAN 703
             ARL+  + A+ V+ +A  ++P   +I+  AA+LE +      ++ K ++   +S  L   
Sbjct:   354 ARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKA 413

Query:   704 GVEINREH----WFKEAIEAEKAGSVHTCQALIRA--------IIGYGVEQ--EDRKHTW 749
              VE+            A+E     SV    AL R         ++    E    DR H W
Sbjct:   414 AVELEEPEDARIMLSRAVECCPT-SVELWLALARLETYENARKVLNKARENIPTDR-HIW 471

Query:   750 MEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAH 809
             +  A+     G  +    I  +A+       S+        +    +++ E     +VA 
Sbjct:   472 ITAAKLEEANGNTQMVEKIIDRAIT------SLRANGVEINREQWIQDAEECDKAGSVAT 525

Query:   810 CPK--SEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGA 867
             C      V+ +   + ++K  W+  A     H   E    +   A+   P  + +WL  A
Sbjct:   526 CQAIMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAA 585

Query:   868 KSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXX 927
               +   G   +   +L  A    P +E +WL   K +    +                  
Sbjct:   586 YFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQA---- 641

Query:   928 XXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERAL 987
               NPNSEEIWLAAVKLESENNEYE           SAPT RV ++S KLEW L N+  A 
Sbjct:   642 --NPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQ 699

Query:   988 QLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEER 1047
             +L +EA++ + DF KLWMMKGQIEEQK L+++A + ++Q +KKCPHS+PLW++L+ LEE+
Sbjct:   700 ELCEEALRHYEDFPKLWMMKGQIEEQKELVERAREAYNQGLKKCPHSIPLWLLLSRLEEK 759

Query:  1048 RKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWA 1107
                L +AR++LEK RL+NP  A+LWL ++R+E RAGLK+IANT+MAKALQECPN+GILW+
Sbjct:   760 VGQLTRARAILEKSRLKNPKNADLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWS 819

Query:  1108 EAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKS 1167
             EAIFLE RPQRKTKSVDALKKCEHDPHVLLAV+KLFW E K  K  R    R + + +  
Sbjct:   820 EAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKA-REWFHRTVKIDSDL 878

Query:  1168 VDA 1170
              DA
Sbjct:   879 GDA 881

 Score = 608 (219.1 bits), Expect = 6.3e-88, Sum P(3) = 6.3e-88
 Identities = 203/690 (29%), Positives = 316/690 (45%)

Query:   618 ELEDPEDARILLSRAVECCPTSVELWLALARLETYEN----ARKVLNKARENIPTDRQIW 673
             ++ D + AR+LL    E  P     W+A ARLE        AR ++ K  E  P    +W
Sbjct:   291 DINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW 350

Query:   674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIR 733
               AA+L+   G+ A    ++ +A+  L  + V I     +  A E E    +   + ++R
Sbjct:   351 LEAARLQP--GDTAKA--VVAQAVRHLPQS-VRI-----YIRAAELET--DIRAKKRVLR 398

Query:   734 AIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNH 793
               + + V    R   W    ++       E AR + ++A+   P+   +WL  A  E   
Sbjct:   399 KALEH-VPNSVR--LW----KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE--- 448

Query:   794 GTRESLETLLQKAVAHCPKSEVLWLMGAKSNK--------KSIWLRAAYFEKNHGTRESL 845
              T E+   +L KA  + P    +W+  AK  +        + I  RA    + +G   + 
Sbjct:   449 -TYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR 507

Query:   846 ETLLQKA--------VAHCPK--SEVLWL----MGAKSKWLA-GDVPAARGILSLAFQAN 890
             E  +Q A        VA C      V+ +       K  W+   D   A   L  A    
Sbjct:   508 EQWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIY 567

Query:   891 PNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN-PNSEEIWLAAVKLESENNE 949
               + +++ +   +      +E                  + P +E +WL   K +    +
Sbjct:   568 AYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGD 627

Query:   950 YEXXXXXXXXXXXSAP-TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKG 1008
                          + P +  + + + KLE   +  ERA +LL +A    P  A+++M   
Sbjct:   628 VPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT-ARVFMKSV 686

Query:  1009 QIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNC 1068
             ++E     +  A +   +A++       LW+M   +EE+++++ +AR    +G  + P+ 
Sbjct:   687 KLEWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQKELVERAREAYNQGLKKCPHS 746

Query:  1069 AELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPRPQRK----TKSVD 1124
               LWL   R+E + G    A  ++ K+  + P    LW E++ LE R   K    T    
Sbjct:   747 IPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNADLWLESVRLEYRAGLKNIANTLMAK 806

Query:  1125 ALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLLAV 1184
             AL++C   P+  +  S+  + E + Q+            KTKSVDALKKCEHDPHVLLAV
Sbjct:   807 ALQEC---PNSGILWSEAIFLEARPQR------------KTKSVDALKKCEHDPHVLLAV 851

Query:  1185 SKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAEPK 1244
             +KLFW E K  K REWF+RTVKID DLGDAWA+FYKFE+ +GTEE Q EV+KRC  AEP+
Sbjct:   852 AKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPR 911

Query:  1245 HGENWCRVAKNVSNWKLPRETILSLVAKDL 1274
             HGE WC V+K++ NW+     IL LVA  L
Sbjct:   912 HGELWCDVSKDIVNWQKKIGEILVLVAAKL 941

 Score = 352 (129.0 bits), Expect = 4.5e-129, Sum P(3) = 4.5e-129
 Identities = 80/164 (48%), Positives = 90/164 (54%)

Query:    61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR------KKK 114
             K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND  DDRHA P KR      KK 
Sbjct:     8 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKN 67

Query:   115 XXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXX 174
                                GY GSLF+  PY+KDDEEAD IY  +D              
Sbjct:    68 QTADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 127

Query:   175 XXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQA 218
                         PKIQQQFSDLKR L  V+ +EW +  +V G A
Sbjct:   128 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEV-GDA 170

 Score = 182 (69.1 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
 Identities = 38/53 (71%), Positives = 41/53 (77%)

Query:    24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
             V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS        P  ++A
Sbjct:   266 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 318

 Score = 158 (60.7 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
 Identities = 56/225 (24%), Positives = 100/225 (44%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             + +I  A+ L +       + P  W+   ++EE    V+ AR    +G ++   S  LWL
Sbjct:   692 LGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQKELVERAREAYNQGLKKCPHSIPLWL 751

Query:   554 EAARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKR---RVYRKALEHI 606
               +RL+     +  ARA++ ++    P +  +W+++  LE     K     +  KAL+  
Sbjct:   752 LLSRLEEKVGQLTRARAILEKSRLKNPKNADLWLESVRLEYRAGLKNIANTLMAKALQEC 811

Query:   607 PNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARE-- 664
             PNS  LW  A+ LE     +     A++ C     + LA+A+L  + + RK+  KARE  
Sbjct:   812 PNSGILWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKL--FWSERKI-TKAREWF 868

Query:   665 --NIPTDRQI---WTTAAKLEEAHGNNAMVDKIIDRALSSLSANG 704
                +  D  +   W    K E  HG     +++  R  ++   +G
Sbjct:   869 HRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHG 913

 Score = 152 (58.6 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
 Identities = 50/197 (25%), Positives = 89/197 (45%)

Query:   495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
             N+ ++AR LL   R + P     ++ S +LE V G + AA+ L  +     +    LW+ 
Sbjct:   660 NEYERARRLLAKARSSAPT-ARVFMKSVKLEWVLGNIAAAQELCEEALRHYEDFPKLWMM 718

Query:   555 AARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETE----TKAKRRVYRKALEHI 606
               +++     V+ AR    Q ++  P S+ +W+  + LE +    T+A+  + +  L++ 
Sbjct:   719 KGQIEEQKELVERAREAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKN- 777

Query:   607 PNSVRLWKAAVELEDPED----ARILLSRAVECCPTSVELWLALARLETYENARKVLNKA 662
             P +  LW  +V LE        A  L+++A++ CP S  LW     LE     +     A
Sbjct:   778 PKNADLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDA 837

Query:   663 RENIPTDRQIWTTAAKL 679
              +    D  +    AKL
Sbjct:   838 LKKCEHDPHVLLAVAKL 854

 Score = 143 (55.4 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
 Identities = 51/194 (26%), Positives = 89/194 (45%)

Query:   497 IKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAA 556
             +++AR       +  P+  P W+  +RLEE  G++  AR ++ K   +N  + DLWLE+ 
Sbjct:   729 VERAREAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNADLWLESV 788

Query:   557 RLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYR--KALEHIPNSV 610
             RL+      + A  ++A+A++  P S  +W +A  LE   + K +     K  EH P+ V
Sbjct:   789 RLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHDPH-V 847

Query:   611 RLWKAAVELEDPE--DARILLSRAVECCPTSVELWLALARLETY---ENARKVLNKAREN 665
              L  A +   + +   AR    R V+      + W    + E     E  ++ + K  EN
Sbjct:   848 LLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCEN 907

Query:   666 I-PTDRQIWTTAAK 678
               P   ++W   +K
Sbjct:   908 AEPRHGELWCDVSK 921

 Score = 38 (18.4 bits), Expect = 4.5e-129, Sum P(3) = 4.5e-129
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:   235 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 273
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   222 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 258

 Score = 38 (18.4 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:    66 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 104
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   222 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 258


>UNIPROTKB|Q2KJJ0 [details] [associations]
            symbol:PRPF6 "Pre-mRNA-processing factor 6" species:9913
            "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA] [GO:0071001 "U4/U6
            snRNP" evidence=IEA] [GO:0050681 "androgen receptor binding"
            evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0043021
            "ribonucleoprotein complex binding" evidence=IEA] [GO:0006403 "RNA
            localization" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003713 "transcription
            coactivator activity" evidence=IEA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IEA] InterPro:IPR003107 InterPro:IPR010491
            InterPro:IPR011990 InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293
            SMART:SM00386 GO:GO:0016607 GO:GO:0045944 GO:GO:0005682
            GO:GO:0003723 GO:GO:0003713 eggNOG:COG0457 Gene3D:1.25.40.10
            GO:GO:0043021 GO:GO:0000398 GO:GO:0071013 GO:GO:0046540
            GO:GO:0006403 GO:GO:0071001 HOGENOM:HOG000116247 KO:K12855
            OMA:IWLRAAY InterPro:IPR027108 PANTHER:PTHR11246:SF1
            EMBL:AAFC03042419 EMBL:BC105318 IPI:IPI00702400
            RefSeq:NP_001039840.1 UniGene:Bt.40556 ProteinModelPortal:Q2KJJ0
            STRING:Q2KJJ0 Ensembl:ENSBTAT00000015480 GeneID:534228
            KEGG:bta:534228 CTD:24148 GeneTree:ENSGT00550000075016
            HOVERGEN:HBG023330 InParanoid:Q2KJJ0 OrthoDB:EOG4FTVZW
            NextBio:20876316 ArrayExpress:Q2KJJ0 Uniprot:Q2KJJ0
        Length = 941

 Score = 1978 (701.3 bits), Expect = 1.8e-204, P = 1.8e-204
 Identities = 398/616 (64%), Positives = 470/616 (76%)

Query:   303 GYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQF 362
             GY GSLF+  PY+KDDEEAD IY  +D                          PKIQQQF
Sbjct:    83 GYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQF 142

Query:   363 SDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFTPLPDSVLRGNLG-GESTGAIDP 421
             SDLKR L  V+ +EW ++PEVGDARN++QRNPR EK TP+PDS    +L  GE+  ++DP
Sbjct:   143 SDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTGENHTSVDP 202

Query:   422 NS------------GLMSQIPGTATPGMLTP-SGDLDLRKMGQARNTLMNVKLNQISDSV 468
                           GL +  PG  TPG++TP +G+LD+RK+GQARNTLM+++L+Q+SDSV
Sbjct:   203 RQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSV 262

Query:   469 VGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVT 528
              GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKSVRETNP+HPPAWIASARLEEVT
Sbjct:   263 SGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVT 322

Query:   529 GKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL 588
             GK+Q ARNLIMKG E    SED+WLEAARLQP DTA+AV+AQAVRH+P SVRI+I+AA+L
Sbjct:   323 GKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAEL 382

Query:   589 ETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALAR 648
             ET+ +AK+RV RKALEH+PNSVRLWKAAVELE+PEDARI+LSRAVECCPTSVELWLALAR
Sbjct:   383 ETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALAR 442

Query:   649 LETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEIN 708
             LETYENARKVLNKARENIPTDR IW TAAKLEEA+GN  MV+KIIDRA++SL ANGVEIN
Sbjct:   443 LETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEIN 502

Query:   709 REHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAI 768
             RE W ++A E +KAGSV TCQA++RA+IG G+E+EDRKHTWMEDA+SC    A ECARAI
Sbjct:   503 REQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAI 562

Query:   769 YAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSI 828
             YA AL  FPSKKS+WLRAAYFEKNHGTRESLE LLQ+AVAHCPK+EVLWLMGAKS     
Sbjct:   563 YAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK---- 618

Query:   829 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ 888
             WL         G   +  ++L  A    P SE +WL   K +    +   AR +L+ A  
Sbjct:   619 WLA--------GDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARS 670

Query:   889 ANPNSEEIWLAAVKLE 904
             + P +  +++ +VKLE
Sbjct:   671 SAPTAR-VFMKSVKLE 685

 Score = 897 (320.8 bits), Expect = 1.7e-127, Sum P(3) = 1.7e-127
 Identities = 224/603 (37%), Positives = 317/603 (52%)

Query:   591 ETKAKRRVYRKALEHIPNSVRLWKAAVELEDP----EDARILLSRAVECCPTSVELWLAL 646
             + K  R + +   E  P+    W A+  LE+     + AR L+ +  E CP S ++WL  
Sbjct:   290 DIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEA 349

Query:   647 ARLETYENARKVLNKARENIPTDRQIWTTAAKLE-EAHGNNAMVDKIIDRALSS--LSAN 703
             ARL+  + A+ V+ +A  ++P   +I+  AA+LE +      ++ K ++   +S  L   
Sbjct:   350 ARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKA 409

Query:   704 GVEINREH----WFKEAIEAEKAGSVHTCQALIRA--------IIGYGVEQ--EDRKHTW 749
              VE+            A+E     SV    AL R         ++    E    DR H W
Sbjct:   410 AVELEEPEDARIMLSRAVECCPT-SVELWLALARLETYENARKVLNKARENIPTDR-HIW 467

Query:   750 MEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAH 809
             +  A+     G  +    I  +A+       S+        +    +++ E     +VA 
Sbjct:   468 ITAAKLEEANGNTQMVEKIIDRAIT------SLRANGVEINREQWIQDAEECDKAGSVAT 521

Query:   810 CPK--SEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGA 867
             C      V+ +   + ++K  W+  A     H   E    +   A+   P  + +WL  A
Sbjct:   522 CQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAA 581

Query:   868 KSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXX 927
               +   G   +   +L  A    P +E +WL   K +    +                  
Sbjct:   582 YFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQA---- 637

Query:   928 XXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERAL 987
               NPNSEEIWLAAVKLESENNEYE           SAPT RV ++S KLEW L NL  A 
Sbjct:   638 --NPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNLVAAQ 695

Query:   988 QLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEER 1047
             +L +EA+K + DF KLWMMKGQIEEQ+ L++KA + ++Q +KKCPHS PLW++L+ LEE+
Sbjct:   696 ELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLKKCPHSTPLWLLLSRLEEK 755

Query:  1048 RKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWA 1107
                L +AR++LEK RL+NP    LWL ++R+E RAGLK+IA+T+MAKALQECPN+G+LW+
Sbjct:   756 VGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIASTLMAKALQECPNSGVLWS 815

Query:  1108 EAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKS 1167
             EAIFLE RPQRKTKSVDALKKCEHDPHVLLAV+KLFW E K  K  R    R + + +  
Sbjct:   816 EAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKA-REWFHRTVKIDSDL 874

Query:  1168 VDA 1170
              DA
Sbjct:   875 GDA 877

 Score = 603 (217.3 bits), Expect = 2.4e-87, Sum P(3) = 2.4e-87
 Identities = 204/689 (29%), Positives = 319/689 (46%)

Query:   618 ELEDPEDARILLSRAVECCPTSVELWLALARLETYEN----ARKVLNKARENIPTDRQIW 673
             ++ D + AR+LL    E  P     W+A ARLE        AR ++ K  E  P    +W
Sbjct:   287 DINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW 346

Query:   674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIR 733
               AA+L+   G+ A    ++ +A+  L  + V I     +  A E E    +   + ++R
Sbjct:   347 LEAARLQP--GDTAKA--VVAQAVRHLPQS-VRI-----YIRAAELET--DIRAKKRVLR 394

Query:   734 AIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNH 793
               + + V    R   W    ++       E AR + ++A+   P+   +WL  A  E   
Sbjct:   395 KALEH-VPNSVR--LW----KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE--- 444

Query:   794 GTRESLETLLQKAVAHCPKSEVLWLMGAKSNK--------KSIWLRAAYFEKNHGTRESL 845
              T E+   +L KA  + P    +W+  AK  +        + I  RA    + +G   + 
Sbjct:   445 -TYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR 503

Query:   846 ETLLQKA--------VAHCPKSEVLWLMGA-------KSKWLA-GDVPAARGILSLAFQA 889
             E  +Q A        VA C ++ +  ++G        K  W+   D   A   L  A   
Sbjct:   504 EQWIQDAEECDKAGSVATC-QAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAI 562

Query:   890 NPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN-PNSEEIWLAAVKLESENN 948
                + +++ +   +      +E                  + P +E +WL   K +    
Sbjct:   563 YAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAG 622

Query:   949 EYEXXXXXXXXXXXSAP-TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMK 1007
             +             + P +  + + + KLE   +  ERA +LL +A    P  A+++M  
Sbjct:   623 DVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT-ARVFMKS 681

Query:  1008 GQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPN 1067
              ++E     L  A +   +A+K       LW+M   +EE+ +++ KAR    +G  + P+
Sbjct:   682 VKLEWVLGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLKKCPH 741

Query:  1068 CAELWLAAIRVEIRAGLKDIANTMMAKALQECP-NAGILWAEAIFLEPRPQRK----TKS 1122
                LWL   R+E + G    A  ++ K+  + P N G LW E++ LE R   K    T  
Sbjct:   742 STPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPG-LWLESVRLEYRAGLKNIASTLM 800

Query:  1123 VDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLL 1182
               AL++C   P+  +  S+  + E + Q+            KTKSVDALKKCEHDPHVLL
Sbjct:   801 AKALQEC---PNSGVLWSEAIFLEARPQR------------KTKSVDALKKCEHDPHVLL 845

Query:  1183 AVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAE 1242
             AV+KLFW E K  K REWF+RTVKID DLGDAWA+FYKFE+ +GTEE + EV++RC  AE
Sbjct:   846 AVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQREEVRRRCENAE 905

Query:  1243 PKHGENWCRVAKNVSNWKLPRETILSLVA 1271
             P+HGE WC  +K+++NW+     IL LVA
Sbjct:   906 PRHGELWCATSKDIANWQRKIGEILVLVA 934

 Score = 352 (129.0 bits), Expect = 1.7e-127, Sum P(3) = 1.7e-127
 Identities = 80/164 (48%), Positives = 90/164 (54%)

Query:    61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR------KKK 114
             K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND  DDRHA P KR      KK 
Sbjct:     4 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKS 63

Query:   115 XXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXX 174
                                GY GSLF+  PY+KDDEEAD IY  +D              
Sbjct:    64 QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 123

Query:   175 XXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQA 218
                         PKIQQQFSDLKR L  V+ +EW +  +V G A
Sbjct:   124 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEV-GDA 166

 Score = 313 (115.2 bits), Expect = 2.4e-54, Sum P(3) = 2.4e-54
 Identities = 145/592 (24%), Positives = 233/592 (39%)

Query:   496 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEA 555
             DI+  + +L+   E  PN    W A+  LEE     + AR ++ +  E   TS +LWL  
Sbjct:   385 DIRAKKRVLRKALEHVPNSVRLWKAAVELEEP----EDARIMLSRAVECCPTSVELWLAL 440

Query:   556 ARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKA 615
             ARL+  + AR V+ +A  +IPT   IWI AA LE E     ++  K ++    S+R    
Sbjct:   441 ARLETYENARKVLNKARENIPTDRHIWITAAKLE-EANGNTQMVEKIIDRAITSLRA--N 497

Query:   616 AVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQ-IWT 674
              VE+   +     +  A EC         ++A  +     R V+    E    DR+  W 
Sbjct:   498 GVEINREQ----WIQDAEECDKAG-----SVATCQAV--MRAVIGIGIEE--EDRKHTWM 544

Query:   675 TAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRA 734
               A    AH  NA+      RA+ + +       +  W + A   +  G+  + +AL++ 
Sbjct:   545 EDADSCVAH--NALE---CARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQR 599

Query:   735 IIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHG 794
              + +  + E     W+  A+S    G    AR+I A A    P+ + IWL A   E  + 
Sbjct:   600 AVAHCPKAEV---LWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENN 656

Query:   795 TRESLETLLQKAVAHCPKSEVL-------WLMGAKSNKKSIWLRAA--Y--FEK---NHG 840
               E    LL KA +  P + V        W++G     + +   A   Y  F K     G
Sbjct:   657 EYERARRLLAKARSSAPTARVFMKSVKLEWVLGNLVAAQELCEEALKHYEDFPKLWMMKG 716

Query:   841 TRESLETLLQKA-------VAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNS 893
               E  E L++KA       +  CP S  LWL+ ++ +   G +  AR IL  +   NP +
Sbjct:   717 QIEEQEELVEKAREAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKN 776

Query:   894 EEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXX 953
               +WL +V+LE     Y                    PNS  +W  A+ LE+     +  
Sbjct:   777 PGLWLESVRLE-----YRAGLKNIASTLMAKALQEC-PNSGVLWSEAIFLEARP---QRK 827

Query:   954 XXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQ 1013
                          P V++  AKL W    + +A +     +K+  D    W    + E Q
Sbjct:   828 TKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQ 887

Query:  1014 KNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRN 1065
                 ++  +   +     P    LW   +      +  I    VL   R++N
Sbjct:   888 HGTEEQREEVRRRCENAEPRHGELWCATSKDIANWQRKIGEILVLVAARIKN 939

 Score = 182 (69.1 bits), Expect = 4.5e-107, Sum P(2) = 4.5e-107
 Identities = 38/53 (71%), Positives = 41/53 (77%)

Query:    24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
             V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS        P  ++A
Sbjct:   262 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 314

 Score = 154 (59.3 bits), Expect = 9.0e-38, Sum P(3) = 9.0e-38
 Identities = 55/225 (24%), Positives = 101/225 (44%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             + ++  A+ L +   +   + P  W+   ++EE    V+ AR    +G ++   S  LWL
Sbjct:   688 LGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLKKCPHSTPLWL 747

Query:   554 EAARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKR---RVYRKALEHI 606
               +RL+     +  ARA++ ++    P +  +W+++  LE     K     +  KAL+  
Sbjct:   748 LLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIASTLMAKALQEC 807

Query:   607 PNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARE-- 664
             PNS  LW  A+ LE     +     A++ C     + LA+A+L  + + RK+  KARE  
Sbjct:   808 PNSGVLWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKL--FWSERKI-TKAREWF 864

Query:   665 --NIPTDRQI---WTTAAKLEEAHGNNAMVDKIIDRALSSLSANG 704
                +  D  +   W    K E  HG     +++  R  ++   +G
Sbjct:   865 HRTVKIDSDLGDAWAFFYKFELQHGTEEQREEVRRRCENAEPRHG 909

 Score = 108 (43.1 bits), Expect = 5.4e-33, Sum P(3) = 5.4e-33
 Identities = 39/162 (24%), Positives = 65/162 (40%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             +  + +AR +L+  R  NP +P  W+ S RLE   G    A  L+ K  +E   S  LW 
Sbjct:   756 VGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIASTLMAKALQECPNSGVLWS 815

Query:   554 EAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL---ETETKAKRRVYRKALEHIPNSV 610
             EA  L+     +     A++       + +  A L   E +    R  + + ++   +  
Sbjct:   816 EAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLG 875

Query:   611 RLWKAAVELE---DPEDARILLSRAVECC-PTSVELWLALAR 648
               W    + E     E+ R  + R  E   P   ELW A ++
Sbjct:   876 DAWAFFYKFELQHGTEEQREEVRRRCENAEPRHGELWCATSK 917

 Score = 38 (18.4 bits), Expect = 1.7e-127, Sum P(3) = 1.7e-127
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:   235 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 273
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   218 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 254

 Score = 38 (18.4 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:    66 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 104
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   218 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 254


>UNIPROTKB|E2RPW8 [details] [associations]
            symbol:PRPF6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR003107
            InterPro:IPR010491 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 Pfam:PF06424 Pfam:PF13181 PROSITE:PS50293
            SMART:SM00386 GO:GO:0005634 Gene3D:1.25.40.10 GO:GO:0000398
            KO:K12855 OMA:IWLRAAY InterPro:IPR027108 PANTHER:PTHR11246:SF1
            CTD:24148 GeneTree:ENSGT00550000075016 EMBL:AAEX03014173
            EMBL:AAEX03014174 RefSeq:XP_534481.3 Ensembl:ENSCAFT00000020914
            GeneID:477289 KEGG:cfa:477289 Uniprot:E2RPW8
        Length = 941

 Score = 1978 (701.3 bits), Expect = 1.8e-204, P = 1.8e-204
 Identities = 398/616 (64%), Positives = 470/616 (76%)

Query:   303 GYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQF 362
             GY GSLF+  PY+KDDEEAD IY  +D                          PKIQQQF
Sbjct:    83 GYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQF 142

Query:   363 SDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFTPLPDSVLRGNLG-GESTGAIDP 421
             SDLKR L  V+ +EW ++PEVGDARN++QRNPR EK TP+PDS    +L  GE+  ++DP
Sbjct:   143 SDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTGENHTSVDP 202

Query:   422 NS------------GLMSQIPGTATPGMLTP-SGDLDLRKMGQARNTLMNVKLNQISDSV 468
                           GL +  PG  TPG++TP +G+LD+RK+GQARNTLM+++L+Q+SDSV
Sbjct:   203 RQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSV 262

Query:   469 VGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVT 528
              GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKSVRETNP+HPPAWIASARLEEVT
Sbjct:   263 SGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVT 322

Query:   529 GKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL 588
             GK+Q ARNLIMKG E    SED+WLEAARLQP DTA+AV+AQAVRH+P SVRI+I+AA+L
Sbjct:   323 GKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAEL 382

Query:   589 ETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALAR 648
             ET+ +AK+RV RKALEH+PNSVRLWKAAVELE+PEDARI+LSRAVECCPTSVELWLALAR
Sbjct:   383 ETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALAR 442

Query:   649 LETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEIN 708
             LETYENARKVLNKARENIPTDR IW TAAKLEEA+GN  MV+KIIDRA++SL ANGVEIN
Sbjct:   443 LETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEIN 502

Query:   709 REHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAI 768
             RE W ++A E +KAGSV TCQA++RA+IG G+E+EDRKHTWMEDA+SC    A ECARAI
Sbjct:   503 REQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAI 562

Query:   769 YAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSI 828
             YA AL  FPSKKS+WLRAAYFEKNHGTRESLE LLQ+AVAHCPK+EVLWLMGAKS     
Sbjct:   563 YAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK---- 618

Query:   829 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ 888
             WL         G   +  ++L  A    P SE +WL   K +    +   AR +L+ A  
Sbjct:   619 WLA--------GDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARS 670

Query:   889 ANPNSEEIWLAAVKLE 904
             + P +  +++ +VKLE
Sbjct:   671 SAPTAR-VFMKSVKLE 685

 Score = 896 (320.5 bits), Expect = 2.2e-127, Sum P(3) = 2.2e-127
 Identities = 222/603 (36%), Positives = 317/603 (52%)

Query:   591 ETKAKRRVYRKALEHIPNSVRLWKAAVELEDP----EDARILLSRAVECCPTSVELWLAL 646
             + K  R + +   E  P+    W A+  LE+     + AR L+ +  E CP S ++WL  
Sbjct:   290 DIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEA 349

Query:   647 ARLETYENARKVLNKARENIPTDRQIWTTAAKLE-EAHGNNAMVDKIIDRALSS--LSAN 703
             ARL+  + A+ V+ +A  ++P   +I+  AA+LE +      ++ K ++   +S  L   
Sbjct:   350 ARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKA 409

Query:   704 GVEINREH----WFKEAIEAEKAGSVHTCQALIRA--------IIGYGVEQ--EDRKHTW 749
              VE+            A+E     SV    AL R         ++    E    DR H W
Sbjct:   410 AVELEEPEDARIMLSRAVECCPT-SVELWLALARLETYENARKVLNKARENIPTDR-HIW 467

Query:   750 MEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAH 809
             +  A+     G  +    I  +A+       S+        +    +++ E     +VA 
Sbjct:   468 ITAAKLEEANGNTQMVEKIIDRAIT------SLRANGVEINREQWIQDAEECDKAGSVAT 521

Query:   810 CPK--SEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGA 867
             C      V+ +   + ++K  W+  A     H   E    +   A+   P  + +WL  A
Sbjct:   522 CQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAA 581

Query:   868 KSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXX 927
               +   G   +   +L  A    P +E +WL   K +    +                  
Sbjct:   582 YFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQA---- 637

Query:   928 XXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERAL 987
               NPNSEEIWLAAVKLESENNEYE           SAPT RV ++S KLEW L N+  A 
Sbjct:   638 --NPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQ 695

Query:   988 QLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEER 1047
             +L +EA++ + DF KLWMMKGQIEEQ+ L+++A + ++Q +KKCPHS PLW++L+ LEE+
Sbjct:   696 ELCEEALRHYEDFPKLWMMKGQIEEQEELMERAREAYNQGLKKCPHSTPLWLLLSRLEEK 755

Query:  1048 RKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWA 1107
                L +AR++LEK RL+NP    LWL ++R+E RAGLK+IANT+MAKALQECPN+G+LW+
Sbjct:   756 VGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGVLWS 815

Query:  1108 EAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKS 1167
             EAIFLE RPQRKTKSVDALKKCEHDPHVLLAV+KLFW E K  K  R    R + + +  
Sbjct:   816 EAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKA-REWFHRTVKIDSDL 874

Query:  1168 VDA 1170
              DA
Sbjct:   875 GDA 877

 Score = 601 (216.6 bits), Expect = 4.3e-87, Sum P(3) = 4.3e-87
 Identities = 202/689 (29%), Positives = 320/689 (46%)

Query:   618 ELEDPEDARILLSRAVECCPTSVELWLALARLETYEN----ARKVLNKARENIPTDRQIW 673
             ++ D + AR+LL    E  P     W+A ARLE        AR ++ K  E  P    +W
Sbjct:   287 DINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW 346

Query:   674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIR 733
               AA+L+   G+ A    ++ +A+  L  + V I     +  A E E    +   + ++R
Sbjct:   347 LEAARLQP--GDTAKA--VVAQAVRHLPQS-VRI-----YIRAAELET--DIRAKKRVLR 394

Query:   734 AIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNH 793
               + + V    R   W    ++       E AR + ++A+   P+   +WL  A  E   
Sbjct:   395 KALEH-VPNSVR--LW----KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE--- 444

Query:   794 GTRESLETLLQKAVAHCPKSEVLWLMGAKSNK--------KSIWLRAAYFEKNHGTRESL 845
              T E+   +L KA  + P    +W+  AK  +        + I  RA    + +G   + 
Sbjct:   445 -TYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR 503

Query:   846 ETLLQKA--------VAHCPKSEVLWLMGA-------KSKWLA-GDVPAARGILSLAFQA 889
             E  +Q A        VA C ++ +  ++G        K  W+   D   A   L  A   
Sbjct:   504 EQWIQDAEECDKAGSVATC-QAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAI 562

Query:   890 NPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN-PNSEEIWLAAVKLESENN 948
                + +++ +   +      +E                  + P +E +WL   K +    
Sbjct:   563 YAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAG 622

Query:   949 EYEXXXXXXXXXXXSAP-TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMK 1007
             +             + P +  + + + KLE   +  ERA +LL +A    P  A+++M  
Sbjct:   623 DVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT-ARVFMKS 681

Query:  1008 GQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPN 1067
              ++E     +  A +   +A++       LW+M   +EE+ +++ +AR    +G  + P+
Sbjct:   682 VKLEWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQEELMERAREAYNQGLKKCPH 741

Query:  1068 CAELWLAAIRVEIRAGLKDIANTMMAKALQECP-NAGILWAEAIFLEPRPQRK----TKS 1122
                LWL   R+E + G    A  ++ K+  + P N G LW E++ LE R   K    T  
Sbjct:   742 STPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPG-LWLESVRLEYRAGLKNIANTLM 800

Query:  1123 VDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLL 1182
               AL++C   P+  +  S+  + E + Q+            KTKSVDALKKCEHDPHVLL
Sbjct:   801 AKALQEC---PNSGVLWSEAIFLEARPQR------------KTKSVDALKKCEHDPHVLL 845

Query:  1183 AVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAE 1242
             AV+KLFW E K  K REWF+RTVKID DLGDAWA+FYKFE+ +GTEE + EV++RC  AE
Sbjct:   846 AVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQREEVRRRCENAE 905

Query:  1243 PKHGENWCRVAKNVSNWKLPRETILSLVA 1271
             P+HGE WC V+K+++NW+     IL LVA
Sbjct:   906 PRHGELWCAVSKDIANWQRKIGEILVLVA 934

 Score = 352 (129.0 bits), Expect = 2.2e-127, Sum P(3) = 2.2e-127
 Identities = 80/164 (48%), Positives = 90/164 (54%)

Query:    61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR------KKK 114
             K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND  DDRHA P KR      KK 
Sbjct:     4 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKS 63

Query:   115 XXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXX 174
                                GY GSLF+  PY+KDDEEAD IY  +D              
Sbjct:    64 QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 123

Query:   175 XXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQA 218
                         PKIQQQFSDLKR L  V+ +EW +  +V G A
Sbjct:   124 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEV-GDA 166

 Score = 182 (69.1 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
 Identities = 38/53 (71%), Positives = 41/53 (77%)

Query:    24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
             V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS        P  ++A
Sbjct:   262 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 314

 Score = 153 (58.9 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
 Identities = 55/225 (24%), Positives = 100/225 (44%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             + +I  A+ L +       + P  W+   ++EE    ++ AR    +G ++   S  LWL
Sbjct:   688 LGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQEELMERAREAYNQGLKKCPHSTPLWL 747

Query:   554 EAARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKR---RVYRKALEHI 606
               +RL+     +  ARA++ ++    P +  +W+++  LE     K     +  KAL+  
Sbjct:   748 LLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQEC 807

Query:   607 PNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARE-- 664
             PNS  LW  A+ LE     +     A++ C     + LA+A+L  + + RK+  KARE  
Sbjct:   808 PNSGVLWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKL--FWSERKI-TKAREWF 864

Query:   665 --NIPTDRQI---WTTAAKLEEAHGNNAMVDKIIDRALSSLSANG 704
                +  D  +   W    K E  HG     +++  R  ++   +G
Sbjct:   865 HRTVKIDSDLGDAWAFFYKFELQHGTEEQREEVRRRCENAEPRHG 909

 Score = 145 (56.1 bits), Expect = 7.7e-37, Sum P(3) = 7.7e-37
 Identities = 49/197 (24%), Positives = 88/197 (44%)

Query:   495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
             N+ ++AR LL   R + P     ++ S +LE V G + AA+ L  +     +    LW+ 
Sbjct:   656 NEYERARRLLAKARSSAPT-ARVFMKSVKLEWVLGNIAAAQELCEEALRHYEDFPKLWMM 714

Query:   555 AARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETE----TKAKRRVYRKALEHI 606
               +++     ++ AR    Q ++  P S  +W+  + LE +    T+A+  + +  L++ 
Sbjct:   715 KGQIEEQEELMERAREAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKN- 773

Query:   607 PNSVRLWKAAVELEDPED----ARILLSRAVECCPTSVELWLALARLETYENARKVLNKA 662
             P +  LW  +V LE        A  L+++A++ CP S  LW     LE     +     A
Sbjct:   774 PKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGVLWSEAIFLEARPQRKTKSVDA 833

Query:   663 RENIPTDRQIWTTAAKL 679
              +    D  +    AKL
Sbjct:   834 LKKCEHDPHVLLAVAKL 850

 Score = 138 (53.6 bits), Expect = 4.1e-36, Sum P(3) = 4.1e-36
 Identities = 48/179 (26%), Positives = 82/179 (45%)

Query:   512 PNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQP----VDTARAV 567
             P+  P W+  +RLEE  G++  AR ++ K   +N  +  LWLE+ RL+      + A  +
Sbjct:   740 PHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTL 799

Query:   568 IAQAVRHIPTSVRIWIKAADLETETKAKRRVYR--KALEHIPNSVRLWKAAVELEDPE-- 623
             +A+A++  P S  +W +A  LE   + K +     K  EH P+ V L  A +   + +  
Sbjct:   800 MAKALQECPNSGVLWSEAIFLEARPQRKTKSVDALKKCEHDPH-VLLAVAKLFWSERKIT 858

Query:   624 DARILLSRAVECCPTSVELWLALARLETY---ENARKVLNKARENI-PTDRQIWTTAAK 678
              AR    R V+      + W    + E     E  R+ + +  EN  P   ++W   +K
Sbjct:   859 KAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQREEVRRRCENAEPRHGELWCAVSK 917

 Score = 111 (44.1 bits), Expect = 2.6e-33, Sum P(3) = 2.6e-33
 Identities = 39/162 (24%), Positives = 66/162 (40%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             +  + +AR +L+  R  NP +P  W+ S RLE   G    A  L+ K  +E   S  LW 
Sbjct:   756 VGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGVLWS 815

Query:   554 EAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL---ETETKAKRRVYRKALEHIPNSV 610
             EA  L+     +     A++       + +  A L   E +    R  + + ++   +  
Sbjct:   816 EAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLG 875

Query:   611 RLWKAAVELE---DPEDARILLSRAVECC-PTSVELWLALAR 648
               W    + E     E+ R  + R  E   P   ELW A+++
Sbjct:   876 DAWAFFYKFELQHGTEEQREEVRRRCENAEPRHGELWCAVSK 917

 Score = 38 (18.4 bits), Expect = 2.2e-127, Sum P(3) = 2.2e-127
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:   235 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 273
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   218 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 254

 Score = 38 (18.4 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:    66 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 104
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   218 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 254


>MGI|MGI:1922946 [details] [associations]
            symbol:Prpf6 "PRP6 pre-mRNA splicing factor 6 homolog
            (yeast)" species:10090 "Mus musculus" [GO:0000244 "assembly of
            spliceosomal tri-snRNP" evidence=ISO] [GO:0000398 "mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0003713 "transcription
            coactivator activity" evidence=ISO] [GO:0003723 "RNA binding"
            evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005681 "spliceosomal complex"
            evidence=IEA] [GO:0005682 "U5 snRNP" evidence=ISO] [GO:0006396 "RNA
            processing" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0006403 "RNA localization" evidence=ISO]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0043021
            "ribonucleoprotein complex binding" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
            evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
            [GO:0071001 "U4/U6 snRNP" evidence=ISO] [GO:0071013 "catalytic step
            2 spliceosome" evidence=ISO] InterPro:IPR003107 InterPro:IPR010491
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            Pfam:PF06424 Pfam:PF13181 SMART:SM00386 MGI:MGI:1922946
            GO:GO:0005634 GO:GO:0016607 GO:GO:0045944 GO:GO:0005682
            GO:GO:0003723 GO:GO:0003713 eggNOG:COG0457 Gene3D:1.25.40.10
            GO:GO:0050681 GO:GO:0043021 GO:GO:0000398 GO:GO:0071013
            GO:GO:0046540 EMBL:CH466626 GO:GO:0006403 ChiTaRS:PRPF6
            GO:GO:0071001 HOGENOM:HOG000116247 KO:K12855 OMA:IWLRAAY
            InterPro:IPR027108 PANTHER:PTHR11246:SF1 CTD:24148
            GeneTree:ENSGT00550000075016 HOVERGEN:HBG023330 EMBL:BC005801
            EMBL:BC014869 EMBL:BC023691 EMBL:BC025030 EMBL:AK011639
            EMBL:AK145461 EMBL:AK081998 EMBL:AL844529 IPI:IPI00130409
            IPI:IPI00229813 RefSeq:NP_598462.1 UniGene:Mm.292001
            ProteinModelPortal:Q91YR7 SMR:Q91YR7 STRING:Q91YR7
            PhosphoSite:Q91YR7 PaxDb:Q91YR7 PRIDE:Q91YR7
            Ensembl:ENSMUST00000002529 Ensembl:ENSMUST00000136481 GeneID:68879
            KEGG:mmu:68879 UCSC:uc008omy.1 InParanoid:Q3ULJ7 NextBio:328105
            Bgee:Q91YR7 CleanEx:MM_PRPF6 Genevestigator:Q91YR7
            GermOnline:ENSMUSG00000002455 Uniprot:Q91YR7
        Length = 941

 Score = 1975 (700.3 bits), Expect = 3.8e-204, P = 3.8e-204
 Identities = 397/616 (64%), Positives = 470/616 (76%)

Query:   303 GYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQF 362
             GY GSLF+  PY+KDDEEAD IY  +D                          PKIQQQF
Sbjct:    83 GYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQF 142

Query:   363 SDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFTPLPDSVLRGNLG-GESTGAIDP 421
             SDLKR L  V+ +EW ++PEVGDARN++QRNPR EK TP+PDS    +L  GE+  ++DP
Sbjct:   143 SDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTGENHTSVDP 202

Query:   422 NS------------GLMSQIPGTATPGMLTP-SGDLDLRKMGQARNTLMNVKLNQISDSV 468
                           GL +  PG  TPG++TP +G+LD+RK+GQARNTLM+++L+Q+SDSV
Sbjct:   203 RQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSV 262

Query:   469 VGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVT 528
              GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKSVRETNP+HPPAWIASARLEEVT
Sbjct:   263 SGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVT 322

Query:   529 GKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL 588
             GK+Q ARNLIMKG E    SED+WLEAARLQP DTA+AV+AQAVRH+P SVRI+I+AA+L
Sbjct:   323 GKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAEL 382

Query:   589 ETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALAR 648
             ET+ +AK+RV RKALEH+PNSVRLWKAAVELE+PEDARI+LSRAVECCPTSVELWLALAR
Sbjct:   383 ETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALAR 442

Query:   649 LETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEIN 708
             LETYENARKVLNKARENIPTDR IW TAAKLEEA+GN  MV+KIIDRA++SL ANGVEIN
Sbjct:   443 LETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEIN 502

Query:   709 REHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAI 768
             RE W ++A E ++AGSV TCQA++RA+IG G+E+EDRKHTWMEDA+SC    A ECARAI
Sbjct:   503 REQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAI 562

Query:   769 YAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSI 828
             YA AL  FPSKKS+WLRAAYFEKNHGTRESLE LLQ+AVAHCPK+EVLWLMGAKS     
Sbjct:   563 YAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK---- 618

Query:   829 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ 888
             WL         G   +  ++L  A    P SE +WL   K +    +   AR +L+ A  
Sbjct:   619 WLA--------GDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARS 670

Query:   889 ANPNSEEIWLAAVKLE 904
             + P +  +++ +VKLE
Sbjct:   671 SAPTAR-VFMKSVKLE 685

 Score = 897 (320.8 bits), Expect = 1.7e-127, Sum P(3) = 1.7e-127
 Identities = 223/603 (36%), Positives = 316/603 (52%)

Query:   591 ETKAKRRVYRKALEHIPNSVRLWKAAVELEDP----EDARILLSRAVECCPTSVELWLAL 646
             + K  R + +   E  P+    W A+  LE+     + AR L+ +  E CP S ++WL  
Sbjct:   290 DIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEA 349

Query:   647 ARLETYENARKVLNKARENIPTDRQIWTTAAKLE-EAHGNNAMVDKIIDRALSS--LSAN 703
             ARL+  + A+ V+ +A  ++P   +I+  AA+LE +      ++ K ++   +S  L   
Sbjct:   350 ARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKA 409

Query:   704 GVEINREH----WFKEAIEAEKAGSVHTCQALIRA--------IIGYGVEQ--EDRKHTW 749
              VE+            A+E     SV    AL R         ++    E    DR H W
Sbjct:   410 AVELEEPEDARIMLSRAVECCPT-SVELWLALARLETYENARKVLNKARENIPTDR-HIW 467

Query:   750 MEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAH 809
             +  A+     G  +    I  +A+       S+        +    +++ E     +VA 
Sbjct:   468 ITAAKLEEANGNTQMVEKIIDRAIT------SLRANGVEINREQWIQDAEECDRAGSVAT 521

Query:   810 CPK--SEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGA 867
             C      V+ +   + ++K  W+  A     H   E    +   A+   P  + +WL  A
Sbjct:   522 CQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAA 581

Query:   868 KSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXX 927
               +   G   +   +L  A    P +E +WL   K +    +                  
Sbjct:   582 YFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQA---- 637

Query:   928 XXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERAL 987
               NPNSEEIWLAAVKLESENNEYE           SAPT RV ++S KLEW L N+  A 
Sbjct:   638 --NPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNISAAQ 695

Query:   988 QLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEER 1047
             +L +EA++ + DF KLWMMKGQIEEQ  L++KA + ++Q +KKCPHS PLW++L+ LEE+
Sbjct:   696 ELCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEK 755

Query:  1048 RKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWA 1107
                L +AR++LEK RL+NP    LWL ++R+E RAGLK+IANT+MAKALQECPN+GILW+
Sbjct:   756 IGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWS 815

Query:  1108 EAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKS 1167
             EA+FLE RPQRKTKSVDALKKCEHDPHVLLAV+KLFW E K  K  R    R + + +  
Sbjct:   816 EAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKA-REWFHRTVKIDSDL 874

Query:  1168 VDA 1170
              DA
Sbjct:   875 GDA 877

 Score = 610 (219.8 bits), Expect = 3.3e-88, Sum P(3) = 3.3e-88
 Identities = 205/689 (29%), Positives = 320/689 (46%)

Query:   618 ELEDPEDARILLSRAVECCPTSVELWLALARLETYEN----ARKVLNKARENIPTDRQIW 673
             ++ D + AR+LL    E  P     W+A ARLE        AR ++ K  E  P    +W
Sbjct:   287 DINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW 346

Query:   674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIR 733
               AA+L+   G+ A    ++ +A+  L  + V I     +  A E E    +   + ++R
Sbjct:   347 LEAARLQP--GDTAKA--VVAQAVRHLPQS-VRI-----YIRAAELET--DIRAKKRVLR 394

Query:   734 AIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNH 793
               + + V    R   W    ++       E AR + ++A+   P+   +WL  A  E   
Sbjct:   395 KALEH-VPNSVR--LW----KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE--- 444

Query:   794 GTRESLETLLQKAVAHCPKSEVLWLMGAKSNK--------KSIWLRAAYFEKNHGTRESL 845
              T E+   +L KA  + P    +W+  AK  +        + I  RA    + +G   + 
Sbjct:   445 -TYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR 503

Query:   846 ETLLQKA--------VAHCPKSEVLWLMGA-------KSKWLA-GDVPAARGILSLAFQA 889
             E  +Q A        VA C ++ +  ++G        K  W+   D   A   L  A   
Sbjct:   504 EQWIQDAEECDRAGSVATC-QAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAI 562

Query:   890 NPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN-PNSEEIWLAAVKLESENN 948
                + +++ +   +      +E                  + P +E +WL   K +    
Sbjct:   563 YAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAG 622

Query:   949 EYEXXXXXXXXXXXSAP-TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMK 1007
             +             + P +  + + + KLE   +  ERA +LL +A    P  A+++M  
Sbjct:   623 DVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT-ARVFMKS 681

Query:  1008 GQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPN 1067
              ++E     +  A +   +A++       LW+M   +EE+ +++ KAR    +G  + P+
Sbjct:   682 VKLEWVLGNISAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPH 741

Query:  1068 CAELWLAAIRVEIRAGLKDIANTMMAKALQECP-NAGILWAEAIFLEPRPQRK----TKS 1122
                LWL   R+E + G    A  ++ K+  + P N G LW E++ LE R   K    T  
Sbjct:   742 STPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPG-LWLESVRLEYRAGLKNIANTLM 800

Query:  1123 VDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLL 1182
               AL++C   P+  +  S+  + E + Q+            KTKSVDALKKCEHDPHVLL
Sbjct:   801 AKALQEC---PNSGILWSEAVFLEARPQR------------KTKSVDALKKCEHDPHVLL 845

Query:  1183 AVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAE 1242
             AV+KLFW E K  K REWF+RTVKID DLGDAWA+FYKFE+ +GTEE Q EV+KRC  AE
Sbjct:   846 AVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAE 905

Query:  1243 PKHGENWCRVAKNVSNWKLPRETILSLVA 1271
             P+HGE WC V+K+++NW+     IL LVA
Sbjct:   906 PRHGELWCAVSKDITNWQRKIGEILVLVA 934

 Score = 352 (129.0 bits), Expect = 1.7e-127, Sum P(3) = 1.7e-127
 Identities = 80/164 (48%), Positives = 90/164 (54%)

Query:    61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR------KKK 114
             K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND  DDRHA P KR      KK 
Sbjct:     4 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKN 63

Query:   115 XXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXX 174
                                GY GSLF+  PY+KDDEEAD IY  +D              
Sbjct:    64 QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 123

Query:   175 XXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQA 218
                         PKIQQQFSDLKR L  V+ +EW +  +V G A
Sbjct:   124 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEV-GDA 166

 Score = 314 (115.6 bits), Expect = 1.9e-54, Sum P(3) = 1.9e-54
 Identities = 140/592 (23%), Positives = 229/592 (38%)

Query:   496 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEA 555
             DI+  + +L+   E  PN    W A+  LEE     + AR ++ +  E   TS +LWL  
Sbjct:   385 DIRAKKRVLRKALEHVPNSVRLWKAAVELEEP----EDARIMLSRAVECCPTSVELWLAL 440

Query:   556 ARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKA 615
             ARL+  + AR V+ +A  +IPT   IWI AA LE E     ++  K ++    S+R    
Sbjct:   441 ARLETYENARKVLNKARENIPTDRHIWITAAKLE-EANGNTQMVEKIIDRAITSLRA--N 497

Query:   616 AVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQ-IWT 674
              VE+   +     +  A EC         ++A  +     R V+    E    DR+  W 
Sbjct:   498 GVEINREQ----WIQDAEECDRAG-----SVATCQAV--MRAVIGIGIEE--EDRKHTWM 544

Query:   675 TAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRA 734
               A    AH  NA+      RA+ + +       +  W + A   +  G+  + +AL++ 
Sbjct:   545 EDADSCVAH--NALE---CARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQR 599

Query:   735 IIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHG 794
              + +  + E     W+  A+S    G    AR+I A A    P+ + IWL A   E  + 
Sbjct:   600 AVAHCPKAEV---LWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENN 656

Query:   795 TRESLETLLQKAVAHCPKSEVL-------WLMGAKSNKKSI--------------WLRAA 833
               E    LL KA +  P + V        W++G  S  + +              W+   
Sbjct:   657 EYERARRLLAKARSSAPTARVFMKSVKLEWVLGNISAAQELCEEALRHYEDFPKLWMMKG 716

Query:   834 YFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNS 893
               E+     E       + +  CP S  LWL+ ++ +   G +  AR IL  +   NP +
Sbjct:   717 QIEEQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKN 776

Query:   894 EEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXX 953
               +WL +V+LE     Y                    PNS  +W  AV LE+     +  
Sbjct:   777 PGLWLESVRLE-----YRAGLKNIANTLMAKALQEC-PNSGILWSEAVFLEARP---QRK 827

Query:   954 XXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQ 1013
                          P V++  AKL W    + +A +     +K+  D    W    + E Q
Sbjct:   828 TKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQ 887

Query:  1014 KNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRN 1065
                 ++  +   +     P    LW  ++      +  I    VL   R++N
Sbjct:   888 HGTEEQQEEVRKRCENAEPRHGELWCAVSKDITNWQRKIGEILVLVAARIKN 939

 Score = 182 (69.1 bits), Expect = 4.5e-107, Sum P(2) = 4.5e-107
 Identities = 38/53 (71%), Positives = 41/53 (77%)

Query:    24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
             V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS        P  ++A
Sbjct:   262 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 314

 Score = 156 (60.0 bits), Expect = 5.6e-38, Sum P(3) = 5.6e-38
 Identities = 56/225 (24%), Positives = 100/225 (44%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             + +I  A+ L +       + P  W+   ++EE    ++ AR    +G ++   S  LWL
Sbjct:   688 LGNISAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWL 747

Query:   554 EAARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKR---RVYRKALEHI 606
               +RL+     +  ARA++ ++    P +  +W+++  LE     K     +  KAL+  
Sbjct:   748 LLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQEC 807

Query:   607 PNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARE-- 664
             PNS  LW  AV LE     +     A++ C     + LA+A+L  + + RK+  KARE  
Sbjct:   808 PNSGILWSEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKL--FWSERKI-TKAREWF 864

Query:   665 --NIPTDRQI---WTTAAKLEEAHGNNAMVDKIIDRALSSLSANG 704
                +  D  +   W    K E  HG     +++  R  ++   +G
Sbjct:   865 HRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHG 909

 Score = 112 (44.5 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
 Identities = 41/162 (25%), Positives = 68/162 (41%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             I  + +AR +L+  R  NP +P  W+ S RLE   G    A  L+ K  +E   S  LW 
Sbjct:   756 IGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWS 815

Query:   554 EAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL---ETE-TKAKRRVYR--KALEHIP 607
             EA  L+     +     A++       + +  A L   E + TKA+   +R  K    + 
Sbjct:   816 EAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLG 875

Query:   608 NS-VRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALAR 648
             ++    +K  ++    E    +  R     P   ELW A+++
Sbjct:   876 DAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHGELWCAVSK 917

 Score = 38 (18.4 bits), Expect = 1.7e-127, Sum P(3) = 1.7e-127
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:   235 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 273
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   218 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 254

 Score = 38 (18.4 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:    66 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 104
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   218 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 254


>RGD|1307103 [details] [associations]
            symbol:Prpf6 "PRP6 pre-mRNA processing factor 6 homolog (S.
            cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000244
            "assembly of spliceosomal tri-snRNP" evidence=ISO] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=IEA] [GO:0003713
            "transcription coactivator activity" evidence=IEA;ISO] [GO:0003723
            "RNA binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005682 "U5 snRNP" evidence=IEA;ISO] [GO:0006403 "RNA
            localization" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
            evidence=IEA] [GO:0043021 "ribonucleoprotein complex binding"
            evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046540
            "U4/U6 x U5 tri-snRNP complex" evidence=IEA;ISO] [GO:0050681
            "androgen receptor binding" evidence=IEA;ISO] [GO:0071001 "U4/U6
            snRNP" evidence=IEA;ISO] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA;ISO] InterPro:IPR003107 InterPro:IPR010491
            InterPro:IPR011990 InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293
            SMART:SM00386 RGD:1307103 GO:GO:0016607 GO:GO:0045944 GO:GO:0005682
            GO:GO:0003723 GO:GO:0003713 eggNOG:COG0457 Gene3D:1.25.40.10
            GO:GO:0043021 GO:GO:0000398 GO:GO:0071013 GO:GO:0046540
            GO:GO:0006403 GO:GO:0071001 HOGENOM:HOG000116247 KO:K12855
            OMA:IWLRAAY InterPro:IPR027108 PANTHER:PTHR11246:SF1 CTD:24148
            GeneTree:ENSGT00550000075016 HOVERGEN:HBG023330 OrthoDB:EOG4FTVZW
            EMBL:CH474066 EMBL:BC128779 IPI:IPI00368842 RefSeq:NP_001073234.1
            UniGene:Rn.17062 ProteinModelPortal:A1A5S1 STRING:A1A5S1
            Ensembl:ENSRNOT00000021722 GeneID:366276 KEGG:rno:366276
            UCSC:RGD:1307103 InParanoid:A1A5S1 NextBio:689115
            Genevestigator:A1A5S1 Uniprot:A1A5S1
        Length = 941

 Score = 1975 (700.3 bits), Expect = 3.8e-204, P = 3.8e-204
 Identities = 397/616 (64%), Positives = 470/616 (76%)

Query:   303 GYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQF 362
             GY GSLF+  PY+KDDEEAD IY  +D                          PKIQQQF
Sbjct:    83 GYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQF 142

Query:   363 SDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFTPLPDSVLRGNLG-GESTGAIDP 421
             SDLKR L  V+ +EW ++PEVGDARN++QRNPR EK TP+PDS    +L  GE+  ++DP
Sbjct:   143 SDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTGENHTSVDP 202

Query:   422 NS------------GLMSQIPGTATPGMLTP-SGDLDLRKMGQARNTLMNVKLNQISDSV 468
                           GL +  PG  TPG++TP +G+LD+RK+GQARNTLM+++L+Q+SDSV
Sbjct:   203 RQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSV 262

Query:   469 VGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVT 528
              GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKSVRETNP+HPPAWIASARLEEVT
Sbjct:   263 SGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVT 322

Query:   529 GKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL 588
             GK+Q ARNLIMKG E    SED+WLEAARLQP DTA+AV+AQAVRH+P SVRI+I+AA+L
Sbjct:   323 GKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAEL 382

Query:   589 ETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALAR 648
             ET+ +AK+RV RKALEH+PNSVRLWKAAVELE+PEDARI+LSRAVECCPTSVELWLALAR
Sbjct:   383 ETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALAR 442

Query:   649 LETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEIN 708
             LETYENARKVLNKARENIPTDR IW TAAKLEEA+GN  MV+KIIDRA++SL ANGVEIN
Sbjct:   443 LETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEIN 502

Query:   709 REHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAI 768
             RE W ++A E ++AGSV TCQA++RA+IG G+E+EDRKHTWMEDA+SC    A ECARAI
Sbjct:   503 REQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAI 562

Query:   769 YAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSI 828
             YA AL  FPSKKS+WLRAAYFEKNHGTRESLE LLQ+AVAHCPK+EVLWLMGAKS     
Sbjct:   563 YAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK---- 618

Query:   829 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ 888
             WL         G   +  ++L  A    P SE +WL   K +    +   AR +L+ A  
Sbjct:   619 WLA--------GDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARS 670

Query:   889 ANPNSEEIWLAAVKLE 904
             + P +  +++ +VKLE
Sbjct:   671 SAPTAR-VFMKSVKLE 685

 Score = 893 (319.4 bits), Expect = 4.5e-127, Sum P(3) = 4.5e-127
 Identities = 222/603 (36%), Positives = 316/603 (52%)

Query:   591 ETKAKRRVYRKALEHIPNSVRLWKAAVELEDP----EDARILLSRAVECCPTSVELWLAL 646
             + K  R + +   E  P+    W A+  LE+     + AR L+ +  E CP S ++WL  
Sbjct:   290 DIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEA 349

Query:   647 ARLETYENARKVLNKARENIPTDRQIWTTAAKLE-EAHGNNAMVDKIIDRALSS--LSAN 703
             ARL+  + A+ V+ +A  ++P   +I+  AA+LE +      ++ K ++   +S  L   
Sbjct:   350 ARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKA 409

Query:   704 GVEINREH----WFKEAIEAEKAGSVHTCQALIRA--------IIGYGVEQ--EDRKHTW 749
              VE+            A+E     SV    AL R         ++    E    DR H W
Sbjct:   410 AVELEEPEDARIMLSRAVECCPT-SVELWLALARLETYENARKVLNKARENIPTDR-HIW 467

Query:   750 MEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAH 809
             +  A+     G  +    I  +A+       S+        +    +++ E     +VA 
Sbjct:   468 ITAAKLEEANGNTQMVEKIIDRAIT------SLRANGVEINREQWIQDAEECDRAGSVAT 521

Query:   810 CPK--SEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGA 867
             C      V+ +   + ++K  W+  A     H   E    +   A+   P  + +WL  A
Sbjct:   522 CQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAA 581

Query:   868 KSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXX 927
               +   G   +   +L  A    P +E +WL   K +    +                  
Sbjct:   582 YFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQA---- 637

Query:   928 XXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERAL 987
               NPNSEEIWLAAVKLESENNEYE           SAPT RV ++S KLEW L N+  A 
Sbjct:   638 --NPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNITAAQ 695

Query:   988 QLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEER 1047
             +L +EA++ + DF KLWMMKGQIEEQ  L+++A + ++Q +KKCPHS PLW++L+ LEE+
Sbjct:   696 ELCEEALRHYEDFPKLWMMKGQIEEQGELMERAREAYNQGLKKCPHSTPLWLLLSRLEEK 755

Query:  1048 RKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWA 1107
                L +AR++LEK RL+NP    LWL ++R+E RAGLK+IANT+MAKALQECPN+GILW+
Sbjct:   756 IGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWS 815

Query:  1108 EAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKS 1167
             EA+FLE RPQRKTKSVDALKKCEHDPHVLLAV+KLFW E K  K  R    R + + +  
Sbjct:   816 EAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKA-REWFHRTVKIDSDL 874

Query:  1168 VDA 1170
              DA
Sbjct:   875 GDA 877

 Score = 606 (218.4 bits), Expect = 1.0e-87, Sum P(3) = 1.0e-87
 Identities = 204/689 (29%), Positives = 320/689 (46%)

Query:   618 ELEDPEDARILLSRAVECCPTSVELWLALARLETYEN----ARKVLNKARENIPTDRQIW 673
             ++ D + AR+LL    E  P     W+A ARLE        AR ++ K  E  P    +W
Sbjct:   287 DINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW 346

Query:   674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIR 733
               AA+L+   G+ A    ++ +A+  L  + V I     +  A E E    +   + ++R
Sbjct:   347 LEAARLQP--GDTAKA--VVAQAVRHLPQS-VRI-----YIRAAELET--DIRAKKRVLR 394

Query:   734 AIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNH 793
               + + V    R   W    ++       E AR + ++A+   P+   +WL  A  E   
Sbjct:   395 KALEH-VPNSVR--LW----KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE--- 444

Query:   794 GTRESLETLLQKAVAHCPKSEVLWLMGAKSNK--------KSIWLRAAYFEKNHGTRESL 845
              T E+   +L KA  + P    +W+  AK  +        + I  RA    + +G   + 
Sbjct:   445 -TYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR 503

Query:   846 ETLLQKA--------VAHCPKSEVLWLMGA-------KSKWLA-GDVPAARGILSLAFQA 889
             E  +Q A        VA C ++ +  ++G        K  W+   D   A   L  A   
Sbjct:   504 EQWIQDAEECDRAGSVATC-QAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAI 562

Query:   890 NPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN-PNSEEIWLAAVKLESENN 948
                + +++ +   +      +E                  + P +E +WL   K +    
Sbjct:   563 YAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAG 622

Query:   949 EYEXXXXXXXXXXXSAP-TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMK 1007
             +             + P +  + + + KLE   +  ERA +LL +A    P  A+++M  
Sbjct:   623 DVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT-ARVFMKS 681

Query:  1008 GQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPN 1067
              ++E     +  A +   +A++       LW+M   +EE+ +++ +AR    +G  + P+
Sbjct:   682 VKLEWVLGNITAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMERAREAYNQGLKKCPH 741

Query:  1068 CAELWLAAIRVEIRAGLKDIANTMMAKALQECP-NAGILWAEAIFLEPRPQRK----TKS 1122
                LWL   R+E + G    A  ++ K+  + P N G LW E++ LE R   K    T  
Sbjct:   742 STPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPG-LWLESVRLEYRAGLKNIANTLM 800

Query:  1123 VDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLL 1182
               AL++C   P+  +  S+  + E + Q+            KTKSVDALKKCEHDPHVLL
Sbjct:   801 AKALQEC---PNSGILWSEAVFLEARPQR------------KTKSVDALKKCEHDPHVLL 845

Query:  1183 AVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAE 1242
             AV+KLFW E K  K REWF+RTVKID DLGDAWA+FYKFE+ +GTEE Q EV+KRC  AE
Sbjct:   846 AVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAE 905

Query:  1243 PKHGENWCRVAKNVSNWKLPRETILSLVA 1271
             P+HGE WC V+K+++NW+     IL LVA
Sbjct:   906 PRHGELWCAVSKDITNWQRKIGEILVLVA 934

 Score = 352 (129.0 bits), Expect = 4.5e-127, Sum P(3) = 4.5e-127
 Identities = 80/164 (48%), Positives = 90/164 (54%)

Query:    61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR------KKK 114
             K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND  DDRHA P KR      KK 
Sbjct:     4 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKN 63

Query:   115 XXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXX 174
                                GY GSLF+  PY+KDDEEAD IY  +D              
Sbjct:    64 QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 123

Query:   175 XXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQA 218
                         PKIQQQFSDLKR L  V+ +EW +  +V G A
Sbjct:   124 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEV-GDA 166

 Score = 311 (114.5 bits), Expect = 3.8e-54, Sum P(3) = 3.8e-54
 Identities = 140/592 (23%), Positives = 230/592 (38%)

Query:   496 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEA 555
             DI+  + +L+   E  PN    W A+  LEE     + AR ++ +  E   TS +LWL  
Sbjct:   385 DIRAKKRVLRKALEHVPNSVRLWKAAVELEEP----EDARIMLSRAVECCPTSVELWLAL 440

Query:   556 ARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKA 615
             ARL+  + AR V+ +A  +IPT   IWI AA LE E     ++  K ++    S+R    
Sbjct:   441 ARLETYENARKVLNKARENIPTDRHIWITAAKLE-EANGNTQMVEKIIDRAITSLRA--N 497

Query:   616 AVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQ-IWT 674
              VE+   +     +  A EC         ++A  +     R V+    E    DR+  W 
Sbjct:   498 GVEINREQ----WIQDAEECDRAG-----SVATCQAV--MRAVIGIGIEE--EDRKHTWM 544

Query:   675 TAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRA 734
               A    AH  NA+      RA+ + +       +  W + A   +  G+  + +AL++ 
Sbjct:   545 EDADSCVAH--NALE---CARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQR 599

Query:   735 IIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHG 794
              + +  + E     W+  A+S    G    AR+I A A    P+ + IWL A   E  + 
Sbjct:   600 AVAHCPKAEV---LWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENN 656

Query:   795 TRESLETLLQKAVAHCPKSEVL-------WLMG----AKS----------NKKSIWLRAA 833
               E    LL KA +  P + V        W++G    A+           +   +W+   
Sbjct:   657 EYERARRLLAKARSSAPTARVFMKSVKLEWVLGNITAAQELCEEALRHYEDFPKLWMMKG 716

Query:   834 YFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNS 893
               E+     E       + +  CP S  LWL+ ++ +   G +  AR IL  +   NP +
Sbjct:   717 QIEEQGELMERAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKN 776

Query:   894 EEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXX 953
               +WL +V+LE     Y                    PNS  +W  AV LE+     +  
Sbjct:   777 PGLWLESVRLE-----YRAGLKNIANTLMAKALQEC-PNSGILWSEAVFLEARP---QRK 827

Query:   954 XXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQ 1013
                          P V++  AKL W    + +A +     +K+  D    W    + E Q
Sbjct:   828 TKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQ 887

Query:  1014 KNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRN 1065
                 ++  +   +     P    LW  ++      +  I    VL   R++N
Sbjct:   888 HGTEEQQEEVRKRCENAEPRHGELWCAVSKDITNWQRKIGEILVLVAARIKN 939

 Score = 182 (69.1 bits), Expect = 1.2e-106, Sum P(2) = 1.2e-106
 Identities = 38/53 (71%), Positives = 41/53 (77%)

Query:    24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
             V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS        P  ++A
Sbjct:   262 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 314

 Score = 155 (59.6 bits), Expect = 7.1e-38, Sum P(3) = 7.1e-38
 Identities = 56/225 (24%), Positives = 100/225 (44%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             + +I  A+ L +       + P  W+   ++EE    ++ AR    +G ++   S  LWL
Sbjct:   688 LGNITAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMERAREAYNQGLKKCPHSTPLWL 747

Query:   554 EAARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKR---RVYRKALEHI 606
               +RL+     +  ARA++ ++    P +  +W+++  LE     K     +  KAL+  
Sbjct:   748 LLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQEC 807

Query:   607 PNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARE-- 664
             PNS  LW  AV LE     +     A++ C     + LA+A+L  + + RK+  KARE  
Sbjct:   808 PNSGILWSEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKL--FWSERKI-TKAREWF 864

Query:   665 --NIPTDRQI---WTTAAKLEEAHGNNAMVDKIIDRALSSLSANG 704
                +  D  +   W    K E  HG     +++  R  ++   +G
Sbjct:   865 HRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHG 909

 Score = 112 (44.5 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
 Identities = 41/162 (25%), Positives = 68/162 (41%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             I  + +AR +L+  R  NP +P  W+ S RLE   G    A  L+ K  +E   S  LW 
Sbjct:   756 IGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWS 815

Query:   554 EAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL---ETE-TKAKRRVYR--KALEHIP 607
             EA  L+     +     A++       + +  A L   E + TKA+   +R  K    + 
Sbjct:   816 EAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLG 875

Query:   608 NS-VRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALAR 648
             ++    +K  ++    E    +  R     P   ELW A+++
Sbjct:   876 DAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHGELWCAVSK 917

 Score = 38 (18.4 bits), Expect = 4.5e-127, Sum P(3) = 4.5e-127
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:   235 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 273
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   218 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 254

 Score = 38 (18.4 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:    66 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 104
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   218 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 254


>UNIPROTKB|O94906 [details] [associations]
            symbol:PRPF6 "Pre-mRNA-processing factor 6" species:9606
            "Homo sapiens" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005681 "spliceosomal complex" evidence=NAS] [GO:0000375 "RNA
            splicing, via transesterification reactions" evidence=NAS]
            [GO:0000245 "spliceosomal complex assembly" evidence=NAS]
            [GO:0008380 "RNA splicing" evidence=NAS;TAS] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC;TAS] [GO:0003713 "transcription
            coactivator activity" evidence=IGI] [GO:0003723 "RNA binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006403 "RNA
            localization" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0050681 "androgen receptor binding" evidence=IPI] [GO:0005654
            "nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043021 "ribonucleoprotein complex binding" evidence=IDA]
            [GO:0005682 "U5 snRNP" evidence=IDA] [GO:0046540 "U4/U6 x U5
            tri-snRNP complex" evidence=IDA] [GO:0071001 "U4/U6 snRNP"
            evidence=IDA] [GO:0000244 "assembly of spliceosomal tri-snRNP"
            evidence=IC;IMP] Reactome:REACT_71 InterPro:IPR003107
            InterPro:IPR010491 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 Pfam:PF06424 Pfam:PF13181 SMART:SM00386
            GO:GO:0005654 GO:GO:0016607 Reactome:REACT_1675 GO:GO:0045944
            GO:GO:0005682 GO:GO:0000244 GO:GO:0003723 Orphanet:791
            EMBL:AL118506 GO:GO:0003713 eggNOG:COG0457 Gene3D:1.25.40.10
            GO:GO:0043021 GO:GO:0071013 GO:GO:0000245 GO:GO:0046540
            GO:GO:0006403 ChiTaRS:PRPF6 GO:GO:0071001 KO:K12855 OMA:IWLRAAY
            InterPro:IPR027108 PANTHER:PTHR11246:SF1 CTD:24148
            HOVERGEN:HBG023330 OrthoDB:EOG4FTVZW EMBL:AB019219 EMBL:AF221842
            EMBL:AF026031 EMBL:AK001554 EMBL:AK314310 EMBL:AL356790
            EMBL:AL355803 EMBL:BC001666 EMBL:AL137320 IPI:IPI00305068
            PIR:T46386 RefSeq:NP_036601.2 UniGene:Hs.31334
            ProteinModelPortal:O94906 SMR:O94906 DIP:DIP-29006N IntAct:O94906
            MINT:MINT-260551 STRING:O94906 PhosphoSite:O94906 PaxDb:O94906
            PeptideAtlas:O94906 PRIDE:O94906 Ensembl:ENST00000266079
            Ensembl:ENST00000535781 GeneID:24148 KEGG:hsa:24148 UCSC:uc002yho.3
            GeneCards:GC20P062612 HGNC:HGNC:15860 HPA:HPA047106 MIM:613979
            MIM:613983 neXtProt:NX_O94906 PharmGKB:PA25682 InParanoid:O94906
            PhylomeDB:O94906 GenomeRNAi:24148 NextBio:46847 Bgee:O94906
            CleanEx:HS_PRPF6 Genevestigator:O94906 GermOnline:ENSG00000101161
            Uniprot:O94906
        Length = 941

 Score = 1974 (699.9 bits), Expect = 4.9e-204, P = 4.9e-204
 Identities = 397/616 (64%), Positives = 470/616 (76%)

Query:   303 GYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQF 362
             GY GSLF+  PY+KDDEEAD IY  +D                          PKIQQQF
Sbjct:    83 GYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQF 142

Query:   363 SDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFTPLPDSVLRGNLG-GESTGAIDP 421
             SDLKR L  V+ +EW ++PEVGDARN++QRNPR EK TP+PDS    +L  GE+  ++DP
Sbjct:   143 SDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQTGENHTSVDP 202

Query:   422 NS------------GLMSQIPGTATPGMLTP-SGDLDLRKMGQARNTLMNVKLNQISDSV 468
                           GL +  PG  TPG++TP +G+LD+RK+GQARNTLM+++L+Q+SDSV
Sbjct:   203 RQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSV 262

Query:   469 VGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVT 528
              GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKSVRETNP+HPPAWIASARLEEVT
Sbjct:   263 SGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVT 322

Query:   529 GKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL 588
             GK+Q ARNLIMKG E    SED+WLEAARLQP DTA+AV+AQAVRH+P SVRI+I+AA+L
Sbjct:   323 GKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAEL 382

Query:   589 ETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALAR 648
             ET+ +AK+RV RKALEH+PNSVRLWKAAVELE+PEDARI+LSRAVECCPTSVELWLALAR
Sbjct:   383 ETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALAR 442

Query:   649 LETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEIN 708
             LETYENARKVLNKARENIPTDR IW TAAKLEEA+GN  MV+KIIDRA++SL ANGVEIN
Sbjct:   443 LETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEIN 502

Query:   709 REHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAI 768
             RE W ++A E ++AGSV TCQA++RA+IG G+E+EDRKHTWMEDA+SC    A ECARAI
Sbjct:   503 REQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAI 562

Query:   769 YAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSI 828
             YA AL  FPSKKS+WLRAAYFEKNHGTRESLE LLQ+AVAHCPK+EVLWLMGAKS     
Sbjct:   563 YAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK---- 618

Query:   829 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ 888
             WL         G   +  ++L  A    P SE +WL   K +    +   AR +L+ A  
Sbjct:   619 WLA--------GDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARS 670

Query:   889 ANPNSEEIWLAAVKLE 904
             + P +  +++ +VKLE
Sbjct:   671 SAPTAR-VFMKSVKLE 685

 Score = 891 (318.7 bits), Expect = 7.3e-127, Sum P(3) = 7.3e-127
 Identities = 221/603 (36%), Positives = 316/603 (52%)

Query:   591 ETKAKRRVYRKALEHIPNSVRLWKAAVELEDP----EDARILLSRAVECCPTSVELWLAL 646
             + K  R + +   E  P+    W A+  LE+     + AR L+ +  E CP S ++WL  
Sbjct:   290 DIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEA 349

Query:   647 ARLETYENARKVLNKARENIPTDRQIWTTAAKLE-EAHGNNAMVDKIIDRALSS--LSAN 703
             ARL+  + A+ V+ +A  ++P   +I+  AA+LE +      ++ K ++   +S  L   
Sbjct:   350 ARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKA 409

Query:   704 GVEINREH----WFKEAIEAEKAGSVHTCQALIRA--------IIGYGVEQ--EDRKHTW 749
              VE+            A+E     SV    AL R         ++    E    DR H W
Sbjct:   410 AVELEEPEDARIMLSRAVECCPT-SVELWLALARLETYENARKVLNKARENIPTDR-HIW 467

Query:   750 MEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAH 809
             +  A+     G  +    I  +A+       S+        +    +++ E     +VA 
Sbjct:   468 ITAAKLEEANGNTQMVEKIIDRAIT------SLRANGVEINREQWIQDAEECDRAGSVAT 521

Query:   810 CPK--SEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGA 867
             C      V+ +   + ++K  W+  A     H   E    +   A+   P  + +WL  A
Sbjct:   522 CQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAA 581

Query:   868 KSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXX 927
               +   G   +   +L  A    P +E +WL   K +    +                  
Sbjct:   582 YFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQA---- 637

Query:   928 XXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERAL 987
               NPNSEEIWLAAVKLESEN+EYE           SAPT RV ++S KLEW  DN+  A 
Sbjct:   638 --NPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQ 695

Query:   988 QLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEER 1047
              L +EA++ + DF KLWMMKGQIEEQK +++KA + ++Q +KKCPHS PLW++L+ LEE+
Sbjct:   696 DLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEK 755

Query:  1048 RKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWA 1107
                L +AR++LEK RL+NP    LWL ++R+E RAGLK+IANT+MAKALQECPN+GILW+
Sbjct:   756 IGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWS 815

Query:  1108 EAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKS 1167
             EAIFLE RPQR+TKSVDALKKCEHDPHVLLAV+KLFW + K  K  R    R + + +  
Sbjct:   816 EAIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRKITKA-REWFHRTVKIDSDL 874

Query:  1168 VDA 1170
              DA
Sbjct:   875 GDA 877

 Score = 627 (225.8 bits), Expect = 2.2e-90, Sum P(3) = 2.2e-90
 Identities = 206/689 (29%), Positives = 324/689 (47%)

Query:   618 ELEDPEDARILLSRAVECCPTSVELWLALARLETYEN----ARKVLNKARENIPTDRQIW 673
             ++ D + AR+LL    E  P     W+A ARLE        AR ++ K  E  P    +W
Sbjct:   287 DINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW 346

Query:   674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIR 733
               AA+L+   G+ A    ++ +A+  L  + V I     +  A E E    +   + ++R
Sbjct:   347 LEAARLQP--GDTAKA--VVAQAVRHLPQS-VRI-----YIRAAELET--DIRAKKRVLR 394

Query:   734 AIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNH 793
               + + V    R   W    ++       E AR + ++A+   P+   +WL  A  E   
Sbjct:   395 KALEH-VPNSVR--LW----KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE--- 444

Query:   794 GTRESLETLLQKAVAHCPKSEVLWLMGAKSNK--------KSIWLRAAYFEKNHGTRESL 845
              T E+   +L KA  + P    +W+  AK  +        + I  RA    + +G   + 
Sbjct:   445 -TYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR 503

Query:   846 ETLLQKA--------VAHCPKSEVLWLMGA-------KSKWLA-GDVPAARGILSLAFQA 889
             E  +Q A        VA C ++ +  ++G        K  W+   D   A   L  A   
Sbjct:   504 EQWIQDAEECDRAGSVATC-QAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAI 562

Query:   890 NPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN-PNSEEIWLAAVKLESENN 948
                + +++ +   +      +E                  + P +E +WL   K +    
Sbjct:   563 YAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAG 622

Query:   949 EYEXXXXXXXXXXXSAP-TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMK 1007
             +             + P +  + + + KLE   D  ERA +LL +A    P  A+++M  
Sbjct:   623 DVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPT-ARVFMKS 681

Query:  1008 GQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPN 1067
              ++E  ++ +  A D   +A++       LW+M   +EE+++M+ KAR    +G  + P+
Sbjct:   682 VKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPH 741

Query:  1068 CAELWLAAIRVEIRAGLKDIANTMMAKALQECP-NAGILWAEAIFLEPRPQRK----TKS 1122
                LWL   R+E + G    A  ++ K+  + P N G LW E++ LE R   K    T  
Sbjct:   742 STPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPG-LWLESVRLEYRAGLKNIANTLM 800

Query:  1123 VDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLL 1182
               AL++C   P+  +  S+  + E + Q+            +TKSVDALKKCEHDPHVLL
Sbjct:   801 AKALQEC---PNSGILWSEAIFLEARPQR------------RTKSVDALKKCEHDPHVLL 845

Query:  1183 AVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAE 1242
             AV+KLFW + K  K REWF+RTVKID DLGDAWA+FYKFE+ +GTEE Q EV+KRC +AE
Sbjct:   846 AVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCESAE 905

Query:  1243 PKHGENWCRVAKNVSNWKLPRETILSLVA 1271
             P+HGE WC V+K+++NW+     IL LVA
Sbjct:   906 PRHGELWCAVSKDIANWQKKIGDILRLVA 934

 Score = 352 (129.0 bits), Expect = 7.3e-127, Sum P(3) = 7.3e-127
 Identities = 80/164 (48%), Positives = 90/164 (54%)

Query:    61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR------KKK 114
             K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND  DDRHA P KR      KK 
Sbjct:     4 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKN 63

Query:   115 XXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXX 174
                                GY GSLF+  PY+KDDEEAD IY  +D              
Sbjct:    64 QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 123

Query:   175 XXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQA 218
                         PKIQQQFSDLKR L  V+ +EW +  +V G A
Sbjct:   124 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEV-GDA 166

 Score = 304 (112.1 bits), Expect = 2.1e-53, Sum P(3) = 2.1e-53
 Identities = 139/596 (23%), Positives = 233/596 (39%)

Query:   496 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEA 555
             DI+  + +L+   E  PN    W A+  LEE     + AR ++ +  E   TS +LWL  
Sbjct:   385 DIRAKKRVLRKALEHVPNSVRLWKAAVELEEP----EDARIMLSRAVECCPTSVELWLAL 440

Query:   556 ARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKA 615
             ARL+  + AR V+ +A  +IPT   IWI AA LE E     ++  K ++    S+R    
Sbjct:   441 ARLETYENARKVLNKARENIPTDRHIWITAAKLE-EANGNTQMVEKIIDRAITSLRA--N 497

Query:   616 AVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQ-IWT 674
              VE+   +     +  A EC         ++A  +     R V+    E    DR+  W 
Sbjct:   498 GVEINREQ----WIQDAEECDRAG-----SVATCQAV--MRAVIGIGIEE--EDRKHTWM 544

Query:   675 TAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRA 734
               A    AH  NA+      RA+ + +       +  W + A   +  G+  + +AL++ 
Sbjct:   545 EDADSCVAH--NALE---CARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQR 599

Query:   735 IIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHG 794
              + +  + E     W+  A+S    G    AR+I A A    P+ + IWL A   E  + 
Sbjct:   600 AVAHCPKAEV---LWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESEND 656

Query:   795 TRESLETLLQKAVAHCPKSEVL-------WLM----GAKS----------NKKSIWLRAA 833
               E    LL KA +  P + V        W+      A+           +   +W+   
Sbjct:   657 EYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKG 716

Query:   834 YFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNS 893
               E+     E       + +  CP S  LWL+ ++ +   G +  AR IL  +   NP +
Sbjct:   717 QIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKN 776

Query:   894 EEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXX 953
               +WL +V+LE     Y                    PNS  +W  A+ LE+     +  
Sbjct:   777 PGLWLESVRLE-----YRAGLKNIANTLMAKALQEC-PNSGILWSEAIFLEARP---QRR 827

Query:   954 XXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQ 1013
                          P V++  AKL W    + +A +     +K+  D    W    + E Q
Sbjct:   828 TKSVDALKKCEHDPHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQ 887

Query:  1014 KNLLDKAHDTFSQAIKKCPHSVPLWIM----LANLEERRKMLIKARSVLEKGRLRN 1065
                 ++  +   +     P    LW      +AN +++   +++    L  GR++N
Sbjct:   888 HGTEEQQEEVRKRCESAEPRHGELWCAVSKDIANWQKKIGDILR----LVAGRIKN 939

 Score = 182 (69.1 bits), Expect = 1.9e-106, Sum P(2) = 1.9e-106
 Identities = 38/53 (71%), Positives = 41/53 (77%)

Query:    24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
             V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS        P  ++A
Sbjct:   262 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 314

 Score = 136 (52.9 bits), Expect = 6.7e-36, Sum P(3) = 6.7e-36
 Identities = 58/244 (23%), Positives = 102/244 (41%)

Query:   452 ARNTLMNVKLNQISDSV-VGQTVVDPK-GYLTDLQSMIPTYGGDINDIK----KARLLLK 505
             AR  + +VKL  + D++   Q + +    +  D   +     G I + K    KAR    
Sbjct:   675 ARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLW-MMKGQIEEQKEMMEKAREAYN 733

Query:   506 SVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQP----V 561
                +  P+  P W+  +RLEE  G++  AR ++ K   +N  +  LWLE+ RL+      
Sbjct:   734 QGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLK 793

Query:   562 DTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYR--KALEHIPNSV-RLWKAAVE 618
             + A  ++A+A++  P S  +W +A  LE   + + +     K  EH P+ +  + K    
Sbjct:   794 NIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWS 853

Query:   619 LEDPEDARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIWT 674
                   AR    R V+      + W    + E    T E   +V  +     P   ++W 
Sbjct:   854 QRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCESAEPRHGELWC 913

Query:   675 TAAK 678
               +K
Sbjct:   914 AVSK 917

 Score = 38 (18.4 bits), Expect = 7.3e-127, Sum P(3) = 7.3e-127
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:   235 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 273
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   218 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 254

 Score = 38 (18.4 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:    66 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 104
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   218 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 254


>UNIPROTKB|I3L7Q4 [details] [associations]
            symbol:PRPF6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0050681 "androgen
            receptor binding" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP
            complex" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043021 "ribonucleoprotein complex binding" evidence=IEA]
            [GO:0006403 "RNA localization" evidence=IEA] [GO:0005682 "U5 snRNP"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003713
            "transcription coactivator activity" evidence=IEA] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR003107
            InterPro:IPR010491 InterPro:IPR011990 Pfam:PF06424 SMART:SM00386
            GO:GO:0045944 GO:GO:0005682 GO:GO:0003723 GO:GO:0003713
            Gene3D:1.25.40.10 GO:GO:0043021 GO:GO:0000398 GO:GO:0071013
            GO:GO:0046540 GO:GO:0006403 GO:GO:0071001 OMA:IWLRAAY
            InterPro:IPR027108 PANTHER:PTHR11246:SF1
            GeneTree:ENSGT00550000075016 Ensembl:ENSSSCT00000022436
            Uniprot:I3L7Q4
        Length = 783

 Score = 1666 (591.5 bits), Expect = 5.0e-203, Sum P(2) = 5.0e-203
 Identities = 374/707 (52%), Positives = 459/707 (64%)

Query:   227 VNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR------ 280
             +N+ KK F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND  DDRHA P KR      
Sbjct:     1 MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM 60

Query:   281 KKKXXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXX 340
             KK                    GY GSLF+  PY+KDDEEAD IY  +D           
Sbjct:    61 KKSQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR 120

Query:   341 XXXXXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFT 400
                            PKIQQQFSDLKR L  V+ +EW ++PEVGDARN++QRNPR EK T
Sbjct:   121 EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT 180

Query:   401 PLPDSVLRGNLG-GESTGAIDPNS-------GLMSQIPGTATPGMLTP-SGDLDLRKMGQ 451
             P+PDS    +L  GE+  ++DP         GL +  PG  TPG++TP +G+LD+RK+GQ
Sbjct:   181 PVPDSFFAKHLQTGENHTSVDPRQTQFGGXGGLNTPYPGGMTPGLMTPGTGELDMRKIGQ 240

Query:   452 ARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETN 511
             ARNTLM+++L+Q+SDSV GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKSVRETN
Sbjct:   241 ARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETN 300

Query:   512 PNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQA 571
             P+HPPAWIASARLEEVTGK+Q ARNLIMKG E    SED+WLEAARLQP           
Sbjct:   301 PHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQP----------- 349

Query:   572 VRHIPTSVRIWIKAADLETETKAKRRVYRK---ALEHIPNSVRLWKAAVELEDPEDARIL 628
                    V I+I+AA+LET+ +AK+RV RK   ALEH+PNSVRLWKAAVELE+PEDARI+
Sbjct:   350 ------GVLIYIRAAELETDIRAKKRVLRKPSPALEHVPNSVRLWKAAVELEEPEDARIM 403

Query:   629 LSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAM 688
             LSRAVECCPTSVELWLALARLETYENARKVLNK R        IW TAAKLEEA+GN  M
Sbjct:   404 LSRAVECCPTSVELWLALARLETYENARKVLNKXRH-------IWITAAKLEEANGNTQM 456

Query:   689 VDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHT 748
             V+KIIDRA++SL ANGVEINRE W ++A E +KAGSV TCQA++RA+IG G+E+EDRKHT
Sbjct:   457 VEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRKHT 516

Query:   749 WMEDAES--CANQGA--YECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQ 804
             WMEDA+S   A++    +E     + Q    +    + +   A        R    + L 
Sbjct:   517 WMEDADSKAFAHEAFAHFEVVALEHFQRKEEWFRSSAFFEGTASLVSATCPRAGAHSALS 576

Query:   805 KAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNH------GTR--------ESLETLLQ 850
             + V     ++  WL G     +SI L  A+  +        G R        + L  +  
Sbjct:   577 REVLWLMGAKSKWLAGDVPAARSI-LALAFQARGRVERLWAGRRLGAGRCLVDPLAWIRX 635

Query:   851 KAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIW 897
             KA +  P + V ++   K +W+ G++ AA+    L  +A  + E+ W
Sbjct:   636 KARSSAPTARV-FMKSVKLEWVLGNLAAAQ---ELCEEALKHYEDXW 678

 Score = 352 (129.0 bits), Expect = 6.0e-63, Sum P(3) = 6.0e-63
 Identities = 80/164 (48%), Positives = 90/164 (54%)

Query:    61 KSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR------KKK 114
             K K F+G+PAPLGYV G+GRGATGFTTRSDIGPARDAND  DDRHA P KR      KK 
Sbjct:     4 KKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKS 63

Query:   115 XXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXX 174
                                GY GSLF+  PY+KDDEEAD IY  +D              
Sbjct:    64 QAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQR 123

Query:   175 XXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQA 218
                         PKIQQQFSDLKR L  V+ +EW +  +V G A
Sbjct:   124 EKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEV-GDA 166

 Score = 321 (118.1 bits), Expect = 5.0e-203, Sum P(2) = 5.0e-203
 Identities = 74/148 (50%), Positives = 97/148 (65%)

Query:   995 KVFPDFAKL-WMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIK 1053
             +VF    KL W++ G +   + L ++A   +       P  +P  +   +L ER      
Sbjct:   645 RVFMKSVKLEWVL-GNLAAAQELCEEALKHYEDXWG--PPRLPSLVDEPHLAERGSAAAV 701

Query:  1054 ARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLE 1113
             A   L + RL       LWL ++R+E RAGLK+IA+T+MAKALQECP++G+LW+EAIFLE
Sbjct:   702 ASRELPELRLG------LWLESVRLEYRAGLKNIASTLMAKALQECPSSGVLWSEAIFLE 755

Query:  1114 PRPQRKTKSVDALKKCEHDPHVLLAVSK 1141
              RPQRKTKSVDALKKCEHDPHVLLAV+K
Sbjct:   756 ARPQRKTKSVDALKKCEHDPHVLLAVAK 783

 Score = 182 (69.1 bits), Expect = 6.1e-45, Sum P(3) = 6.1e-45
 Identities = 38/53 (71%), Positives = 41/53 (77%)

Query:    24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
             V GQTVVDPKGYLTDL SMIPT+GGDINDIKKARLLLKS        P  ++A
Sbjct:   257 VSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIA 309

 Score = 138 (53.6 bits), Expect = 1.1e-183, Sum P(2) = 1.1e-183
 Identities = 43/138 (31%), Positives = 68/138 (49%)

Query:   963 SAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHD 1022
             SAPT RV ++S KLEW L NL  A +L +EA+K + D      +   ++E  +L ++   
Sbjct:   640 SAPTARVFMKSVKLEWVLGNLAAAQELCEEALKHYEDXWGPPRLPSLVDEP-HLAERG-S 697

Query:  1023 TFSQAIKKCPH-SVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIR 1081
               + A ++ P   + LW+    LE R  +   A +++ K     P+   LW  AI +E R
Sbjct:   698 AAAVASRELPELRLGLWLESVRLEYRAGLKNIASTLMAKALQECPSSGVLWSEAIFLEAR 757

Query:  1082 AGLKDIANTMMAKALQEC 1099
                K    T    AL++C
Sbjct:   758 PQRK----TKSVDALKKC 771

 Score = 118 (46.6 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
 Identities = 45/146 (30%), Positives = 67/146 (45%)

Query:  1015 NLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLA 1074
             N + KA        +  PH  P WI  A LEE    L  AR+++ KG    P   ++WL 
Sbjct:   284 NDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLE 343

Query:  1075 AIRVE------IRAG-LK-DIA--NTMMAK---ALQECPNAGILWAEAIFLEPRPQRKTK 1121
             A R++      IRA  L+ DI     ++ K   AL+  PN+  LW  A+ LE     +  
Sbjct:   344 AARLQPGVLIYIRAAELETDIRAKKRVLRKPSPALEHVPNSVRLWKAAVELEEPEDARIM 403

Query:  1122 SVDALKKCEHDPHVLLAVSKLFWCEN 1147
                A++ C     + LA+++L   EN
Sbjct:   404 LSRAVECCPTSVELWLALARLETYEN 429

 Score = 107 (42.7 bits), Expect = 6.0e-63, Sum P(3) = 6.0e-63
 Identities = 44/182 (24%), Positives = 74/182 (40%)

Query:   848 LLQKAVAHC-PKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLES- 905
             LL K+V    P     W+  A+ + + G +  AR ++    +  P SE++WL A +L+  
Sbjct:   291 LLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPG 350

Query:   906 -----ENNEYEXXXXXXXXXXXXXXXXXXN-PNSEEIWLAAVKLESENNEYEXXXXXXXX 959
                     E E                  + PNS  +W AAV+LE    E E        
Sbjct:   351 VLIYIRAAELETDIRAKKRVLRKPSPALEHVPNSVRLWKAAVELE----EPEDARIMLSR 406

Query:   960 XXXSAPTP-RVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLD 1018
                  PT   + +  A+LE      E A ++L++   ++   AKL    G  +  + ++D
Sbjct:   407 AVECCPTSVELWLALARLE----TYENARKVLNKXRHIWITAAKLEEANGNTQMVEKIID 462

Query:  1019 KA 1020
             +A
Sbjct:   463 RA 464

 Score = 100 (40.3 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
 Identities = 74/324 (22%), Positives = 125/324 (38%)

Query:   518 WIASARLEEVTGKVQAARNLI---MKGCEEN--QTSEDLWLEAARLQPVDTARAVIA-QA 571
             WI +A+LEE  G  Q    +I   +     N  + + + W++ A  +  D A +V   QA
Sbjct:   441 WITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINREQWIQDA--EECDKAGSVATCQA 498

Query:   572 VRHIPTSVRI--------WIKAADLETET-KAKRRVYRKALEHIPNSVRLWKAAVELEDP 622
             V      + I        W++ AD +    +A       ALEH       ++++   E  
Sbjct:   499 VMRAVIGIGIEEEDRKHTWMEDADSKAFAHEAFAHFEVVALEHFQRKEEWFRSSAFFEGT 558

Query:   623 ED-ARILLSRAVECCPTSVE-LWLALARLETYEN----ARKVLNKARENIPTDRQIWTTA 676
                      RA      S E LWL  A+ +        AR +L  A +      ++W   
Sbjct:   559 ASLVSATCPRAGAHSALSREVLWLMGAKSKWLAGDVPAARSILALAFQARGRVERLWA-G 617

Query:   677 AKLEEAHGNNAMVDKII-DRALSSLSANGVEINREHWFKEAIEAEKA-GSVHTCQALIR- 733
              +L        +VD +   R  +  SA    +     F ++++ E   G++   Q L   
Sbjct:   618 RRLG---AGRCLVDPLAWIRXKARSSAPTARV-----FMKSVKLEWVLGNLAAAQELCEE 669

Query:   734 AIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNH 793
             A+  Y       +   + D    A +G+   A A+ ++ L     +  +WL +   E   
Sbjct:   670 ALKHYEDXWGPPRLPSLVDEPHLAERGS---AAAVASRELPEL--RLGLWLESVRLEYRA 724

Query:   794 GTRESLETLLQKAVAHCPKSEVLW 817
             G +    TL+ KA+  CP S VLW
Sbjct:   725 GLKNIASTLMAKALQECPSSGVLW 748

 Score = 94 (38.1 bits), Expect = 7.2e-33, Sum P(2) = 7.2e-33
 Identities = 40/141 (28%), Positives = 65/141 (46%)

Query:   518 WIASARLEEVTGKVQAARNLIMKGCEEN-QTSEDLW----LEAARLQPVDTAR-AVIAQA 571
             ++ S +LE V G + AA+ L    CEE  +  ED W    L +   +P    R +  A A
Sbjct:   647 FMKSVKLEWVLGNLAAAQEL----CEEALKHYEDXWGPPRLPSLVDEPHLAERGSAAAVA 702

Query:   572 VRHIPT-SVRIWIKAADLETETKAKR---RVYRKALEHIPNSVRLWKAAVELEDPEDARI 627
              R +P   + +W+++  LE     K     +  KAL+  P+S  LW  A+ LE     + 
Sbjct:   703 SRELPELRLGLWLESVRLEYRAGLKNIASTLMAKALQECPSSGVLWSEAIFLEARPQRKT 762

Query:   628 LLSRAVECCPTSVELWLALAR 648
                 A++ C     + LA+A+
Sbjct:   763 KSVDALKKCEHDPHVLLAVAK 783

 Score = 88 (36.0 bits), Expect = 7.2e-32, Sum P(3) = 7.2e-32
 Identities = 41/183 (22%), Positives = 70/183 (38%)

Query:   875 DVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSE 934
             D+  AR +L    + NP+    W+A+ +LE    + +                   P SE
Sbjct:   285 DIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMC------PKSE 338

Query:   935 EIWLAAVKLESENNEYEXXXXXXXXXXXSA-----PTPRV--MIQSAKLEWC----LDNL 983
             ++WL A +L+     Y                   P+P +  +  S +L W     L+  
Sbjct:   339 DVWLEAARLQPGVLIYIRAAELETDIRAKKRVLRKPSPALEHVPNSVRL-WKAAVELEEP 397

Query:   984 ERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLAN 1043
             E A  +L  A++  P   +LW+   ++E  +N          + + K  H   +WI  A 
Sbjct:   398 EDARIMLSRAVECCPTSVELWLALARLETYENA--------RKVLNKXRH---IWITAAK 446

Query:  1044 LEE 1046
             LEE
Sbjct:   447 LEE 449

 Score = 82 (33.9 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
 Identities = 34/136 (25%), Positives = 56/136 (41%)

Query:   967 PRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTF-- 1024
             P   I SA+LE     L+ A  L+ +  ++ P    +W+   +++    +  +A +    
Sbjct:   304 PPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGVLIYIRAAELETD 363

Query:  1025 -----------SQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWL 1073
                        S A++  P+SV LW     LEE       AR +L +     P   ELWL
Sbjct:   364 IRAKKRVLRKPSPALEHVPNSVRLWKAAVELEEPED----ARIMLSRAVECCPTSVELWL 419

Query:  1074 AAIRVEIRAGLKDIAN 1089
             A  R+E     + + N
Sbjct:   420 ALARLETYENARKVLN 435

 Score = 78 (32.5 bits), Expect = 3.4e-31, Sum P(2) = 3.4e-31
 Identities = 72/312 (23%), Positives = 110/312 (35%)

Query:   518 WIASARLEEVTGKV---QAA-RNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQ--- 570
             WI  A   +  G V   QA  R +I  G EE +  +  W+E A  +    A    A    
Sbjct:   480 WIQDAEECDKAGSVATCQAVMRAVIGIGIEE-EDRKHTWMEDADSKAF--AHEAFAHFEV 536

Query:   571 -AVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVR-LWKAAVELE----DPED 624
              A+ H       +  +A  E           +A  H   S   LW    + +    D   
Sbjct:   537 VALEHFQRKEEWFRSSAFFEGTASLVSATCPRAGAHSALSREVLWLMGAKSKWLAGDVPA 596

Query:   625 ARILLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTDRQIWTTAAKLE 680
             AR +L+ A +       LW A  RL       +    +  KAR + PT R ++  + KLE
Sbjct:   597 ARSILALAFQARGRVERLW-AGRRLGAGRCLVDPLAWIRXKARSSAPTAR-VFMKSVKLE 654

Query:   681 EAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGV 740
                GN A   ++ + AL            + W    + +      H  +    A +    
Sbjct:   655 WVLGNLAAAQELCEEALKHYE--------DXWGPPRLPS-LVDEPHLAERGSAAAVASRE 705

Query:   741 EQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTR-ESL 799
               E R   W+E        G    A  + A+AL   PS   +W  A + E     + +S+
Sbjct:   706 LPELRLGLWLESVRLEYRAGLKNIASTLMAKALQECPSSGVLWSEAIFLEARPQRKTKSV 765

Query:   800 ETLLQKAVAHCP 811
             + L  K   H P
Sbjct:   766 DAL--KKCEHDP 775

 Score = 77 (32.2 bits), Expect = 4.4e-31, Sum P(2) = 4.4e-31
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query:   828 IWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLW 863
             +WL +   E   G +    TL+ KA+  CP S VLW
Sbjct:   713 LWLESVRLEYRAGLKNIASTLMAKALQECPSSGVLW 748

 Score = 60 (26.2 bits), Expect = 2.0e-175, Sum P(2) = 2.0e-175
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query:   862 LWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLES 905
             LWL   + ++ AG    A  +++ A Q  P+S  +W  A+ LE+
Sbjct:   713 LWLESVRLEYRAGLKNIASTLMAKALQECPSSGVLWSEAIFLEA 756

 Score = 54 (24.1 bits), Expect = 2.1e-57, Sum P(3) = 2.1e-57
 Identities = 18/64 (28%), Positives = 28/64 (43%)

Query:   931 PNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLL 990
             P S E+WLA  +LE+  N  +                 + I +AKLE    N +   +++
Sbjct:   412 PTSVELWLALARLETYENARKVLNKXR----------HIWITAAKLEEANGNTQMVEKII 461

Query:   991 DEAI 994
             D AI
Sbjct:   462 DRAI 465

 Score = 51 (23.0 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
 Identities = 19/71 (26%), Positives = 29/71 (40%)

Query:   612 LWKAAVELEDPED----ARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIP 667
             LW  +V LE        A  L+++A++ CP+S  LW     LE     +     A +   
Sbjct:   713 LWLESVRLEYRAGLKNIASTLMAKALQECPSSGVLWSEAIFLEARPQRKTKSVDALKKCE 772

Query:   668 TDRQIWTTAAK 678
              D  +    AK
Sbjct:   773 HDPHVLLAVAK 783

 Score = 46 (21.3 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
 Identities = 25/103 (24%), Positives = 38/103 (36%)

Query:  1176 HDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFE-----IINGTE-E 1229
             H P   +A ++L     K Q  R    +  ++ P   D W    + +      I   E E
Sbjct:   302 HHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGVLIYIRAAELE 361

Query:  1230 TQAEVKKRCLAA-EP--KHGENWCRVAKNVSNWKLPRETILSL 1269
             T    KKR L    P  +H  N  R+ K     + P +  + L
Sbjct:   362 TDIRAKKRVLRKPSPALEHVPNSVRLWKAAVELEEPEDARIML 404

 Score = 42 (19.8 bits), Expect = 7.7e-34, Sum P(3) = 7.7e-34
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query:  1071 LWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWA 1107
             LWL   + +  AG    A +++A A Q       LWA
Sbjct:   580 LWLMGAKSKWLAGDVPAARSILALAFQARGRVERLWA 616

 Score = 38 (18.4 bits), Expect = 5.7e-30, Sum P(3) = 5.7e-30
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query:    66 MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDR 104
             +  P P G   G+    TG      IG AR  N + D R
Sbjct:   213 LNTPYPGGMTPGLMTPGTGELDMRKIGQAR--NTLMDMR 249


>DICTYBASE|DDB_G0272374 [details] [associations]
            symbol:prpf6 "pre-mRNA processing factor 6"
            species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
            processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IEA;ISS] [GO:0046540 "U4/U6 x
            U5 tri-snRNP complex" evidence=ISS] InterPro:IPR003107
            InterPro:IPR010491 InterPro:IPR011990 InterPro:IPR013026
            Pfam:PF06424 PROSITE:PS50293 SMART:SM00386 dictyBase:DDB_G0272374
            GenomeReviews:CM000151_GR eggNOG:COG0457 Gene3D:1.25.40.10
            EMBL:AAFI02000008 GO:GO:0000398 GO:GO:0046540 KO:K12855 OMA:IWLRAAY
            InterPro:IPR027108 PANTHER:PTHR11246:SF1 RefSeq:XP_645169.1
            ProteinModelPortal:Q55A15 STRING:Q55A15 EnsemblProtists:DDB0233221
            GeneID:8618341 KEGG:ddi:DDB_G0272374 InParanoid:Q55A15
            ProtClustDB:CLSZ2729243 Uniprot:Q55A15
        Length = 1014

 Score = 1367 (486.3 bits), Expect = 2.1e-180, Sum P(2) = 2.1e-180
 Identities = 299/697 (42%), Positives = 422/697 (60%)

Query:   226 LVNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVS-----DDRH--AAPV 278
             ++ ++K+ F+    P GY+AG GRGA GFTTR DIG AR++ D+      DD+    +  
Sbjct:     4 ILQKDKRFFLYQEPPPGYIAGFGRGAVGFTTRLDIGTARNS-DIPGFPGRDDKSKLTSNT 62

Query:   279 KRKKKXXXXXXXXXXXXXXXXXXXGYGGS----LFNKDP-YDKDDEEADMIYEEIDXXXX 333
               + +                    + GS    LF+ +  YD++D++AD I++ ID    
Sbjct:    63 GGEDEDEDEQSNKGGGGGDNGRFDEFEGSSTDKLFDSNKGYDQEDKDADAIWDAIDSKMD 122

Query:   334 XXXXXXXXXXXXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQRN 393
                                   PKIQQ   DLK+ L TVS D+W ++P+ GD   R QR 
Sbjct:   123 SRRKKKREANEQLKIEKQRESRPKIQQHLQDLKQDLATVSEDQWASLPDAGDLSRRNQRK 182

Query:   394 PRAEKFTPLPDSVL-RGNLGGESTGAIDPNSGLMSQIPGTATPGMLTPSGD--LDLRKMG 450
              + E +TP+PDSVL R     E+   +  N+ + +  PG    G+   SG    DL ++G
Sbjct:   183 -KMEIYTPVPDSVLERAKSENETYSILQTNNAMTA--PGIGLSGIDNSSGTSTTDLTQVG 239

Query:   451 QARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRET 510
              AR T++++KL+Q+SD+V G+T VDPKGYLTDL+S       ++ DIKKARLL KS   +
Sbjct:   240 SARKTVLDLKLHQVSDNVSGKTCVDPKGYLTDLRSKRIASDAEVGDIKKARLLFKSATTS 299

Query:   511 NPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQ 570
             NP H P+WIA+A+LE + GK+  AR +I + C+E  TSE++W+E A LQ  D A+ V+AQ
Sbjct:   300 NPKHSPSWIAAAKLEVLAGKIVDARKIIAQACKECPTSEEVWIENANLQTPDNAKIVLAQ 359

Query:   571 AVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLS 630
             AVR IP SV+IW+ AA+LE + K K+RV R+ALE IP SV+LWK AVELE+PEDARILL 
Sbjct:   360 AVRVIPHSVKIWLYAANLEKQLKMKKRVLRRALEFIPTSVKLWKEAVELEEPEDARILLG 419

Query:   631 RAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVD 690
             RAVEC P +++LWLALA LETYE AR+VLNKAR+ +P+  +IW +AA+LEE+ G N  V+
Sbjct:   420 RAVECVPDNIDLWLALANLETYEKAREVLNKARQALPSSSEIWISAAQLEESQGKNDNVN 479

Query:   691 KIIDRALSSLSANGVEI-NREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTW 749
             KII +A+ SL +  + + NR+ W  EA ++EK     TCQA+I   IG G+E +DRK  W
Sbjct:   480 KIIKKAIKSLCSGVMNVMNRDKWIAEAEKSEKNQYYVTCQAIIYETIGMGIEDDDRKRIW 539

Query:   750 MEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAH 809
             + DAE C ++G+ + A AIYA  L+ FP+KKS+WL+ A  EK HGT+E+L+  L+KA   
Sbjct:   540 VIDAEECLSRGSIKTANAIYAHILSIFPTKKSVWLKVAQLEKQHGTKETLDQTLEKATQK 599

Query:   810 CPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKS 869
             CP+ E LWLM AK      W+     +     RE    +L +A    P SE +W+   K 
Sbjct:   600 CPQYENLWLMYAKEK----WISGDVAK----ARE----ILAQAFKFNPGSENIWVAAVKI 647

Query:   870 KWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESE 906
             +    ++ AAR +L  A +    +E IW+ +  LE E
Sbjct:   648 ESEMNELRAARNLLKKAREI-AGTERIWMKSALLERE 683

 Score = 513 (185.6 bits), Expect = 4.0e-96, Sum P(3) = 4.0e-96
 Identities = 173/578 (29%), Positives = 264/578 (45%)

Query:   390 KQRNPRAEKFTPLPDSVLRGNLG--GESTGAIDPNSGLMSQIPGTATPGMLTPSGDLDLR 447
             KQR  R +    L D  L+ +L    E   A  P++G +S+        + TP  D  L 
Sbjct:   139 KQRESRPKIQQHLQD--LKQDLATVSEDQWASLPDAGDLSRRNQRKKMEIYTPVPDSVLE 196

Query:   448 KMGQARNTLMNVKLNQISDSV-VGQTVVDPKG--YLTDLQSMIPTYGGDINDIKKARLLL 504
             +      T   ++ N    +  +G + +D       TDL + + +    + D+K  ++  
Sbjct:   197 RAKSENETYSILQTNNAMTAPGIGLSGIDNSSGTSTTDL-TQVGSARKTVLDLKLHQVS- 254

Query:   505 KSVRETNPNHPPAWIASARLEEVT-----GKVQAARNLIMKGCEENQTSEDLWLEAARLQ 559
              +V       P  ++   R + +      G ++ AR L       N      W+ AA+L+
Sbjct:   255 DNVSGKTCVDPKGYLTDLRSKRIASDAEVGDIKKARLLFKSATTSNPKHSPSWIAAAKLE 314

Query:   560 ----PVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKA 615
                  +  AR +IAQA +  PTS  +WI+ A+L+T   AK  V  +A+  IP+SV++W  
Sbjct:   315 VLAGKIVDARKIIAQACKECPTSEEVWIENANLQTPDNAKI-VLAQAVRVIPHSVKIWLY 373

Query:   616 AVELEDP-EDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWT 674
             A  LE   +  + +L RA+E  PTSV+LW     LE  E+AR +L +A E +P +  +W 
Sbjct:   374 AANLEKQLKMKKRVLRRALEFIPTSVKLWKEAVELEEPEDARILLGRAVECVPDNIDLWL 433

Query:   675 TAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRA 734
               A LE       +++K   +AL S S        E W   A   E  G       +I+ 
Sbjct:   434 ALANLETYEKAREVLNKA-RQALPSSS--------EIWISAAQLEESQGKNDNVNKIIKK 484

Query:   735 IIGY---GVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATF---PSKKSIWLRAAY 788
              I     GV     +  W+ +AE       Y   +AI  + +        +K IW+  A 
Sbjct:   485 AIKSLCSGVMNVMNRDKWIAEAEKSEKNQYYVTCQAIIYETIGMGIEDDDRKRIWVIDA- 543

Query:   789 FEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETL 848
               +   +R S++T      AH        ++     KKS+WL+ A  EK HGT+E+L+  
Sbjct:   544 --EECLSRGSIKTA-NAIYAH--------ILSIFPTKKSVWLKVAQLEKQHGTKETLDQT 592

Query:   849 LQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENN 908
             L+KA   CP+ E LWLM AK KW++GDV  AR IL+ AF+ NP SE IW+AAVK+ESE N
Sbjct:   593 LEKATQKCPQYENLWLMYAKEKWISGDVAKAREILAQAFKFNPGSENIWVAAVKIESEMN 652

Query:   909 EYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESE 946
             E                       +E IW+ +  LE E
Sbjct:   653 ELRAARNLLKKAREIA-------GTERIWMKSALLERE 683

 Score = 406 (148.0 bits), Expect = 2.1e-180, Sum P(2) = 2.1e-180
 Identities = 105/348 (30%), Positives = 175/348 (50%)

Query:   930 NPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERA-LQ 988
             NP SE IW+AAVK+ESE NE              A T R+ ++SA LE  L   ++  L 
Sbjct:   634 NPGSENIWVAAVKIESEMNELRAARNLLKKAREIAGTERIWMKSALLERELGGDQKLELS 693

Query:   989 LLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERR 1048
             L+++ ++ +P+  KLW+MK Q+EE++ + +  ++  +Q  +   ++        NL++  
Sbjct:   694 LIEQGLQKYPNSFKLWLMKAQLEERQAIANHQNNQNNQNNQNNQNNQNN--QNNNLQQIS 751

Query:  1049 KMLIKA-RSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWA 1107
                I+  R   +   ++ PN   +W+ A R E R    + A  ++ +A  + P    ++ 
Sbjct:   752 LTSIEIIRQTYKNATVKCPNNGSVWIEASRFEKRNQNFNRARALLEQAKLKNPTDDDIFL 811

Query:  1108 EAI-FLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTK 1166
             E + F +    RK  +       +  P       KL W E    +   S   +C      
Sbjct:   812 EFVRFEDSLGNRKQAATILALGIQASPKS----GKL-WAELIAMEPRHSQRNKC------ 860

Query:  1167 SVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIING 1226
              VDAL +C +DP+V   VSK+FW + K  K ++W+ R     P+ GD WAY+Y F I+  
Sbjct:   861 -VDALNRCNNDPYVFTQVSKIFWMDGKLDKAKQWYQRVTTTFPEFGDGWAYYYAF-ILKF 918

Query:  1227 TEETQAEVKKRCLAAEPKHGENWCRVAKNVSNWKLPRETILSLVAKDL 1274
               E + ++ K+C+ AEP  GE+W +V+K V N +L  + IL LV+ +L
Sbjct:   919 EPENKDQILKKCVEAEPNLGEHWIKVSKQVGNSRLKTDQILKLVSFNL 966

 Score = 344 (126.2 bits), Expect = 8.4e-40, Sum P(2) = 8.4e-40
 Identities = 155/660 (23%), Positives = 277/660 (41%)

Query:   492 GDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDL 551
             G I D +K  ++ ++ +E  P     WI +A L+        A+ ++ +       S  +
Sbjct:   318 GKIVDARK--IIAQACKEC-PTSEEVWIENANLQTPDN----AKIVLAQAVRVIPHSVKI 370

Query:   552 WLEAARLQP-VDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSV 610
             WL AA L+  +   + V+ +A+  IPTSV++W +A +LE E +  R +  +A+E +P+++
Sbjct:   371 WLYAANLEKQLKMKKRVLRRALEFIPTSVKLWKEAVELE-EPEDARILLGRAVECVPDNI 429

Query:   611 RLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYE----NARKVLNKARENI 666
              LW A   LE  E AR +L++A +  P+S E+W++ A+LE  +    N  K++ KA +++
Sbjct:   430 DLWLALANLETYEKAREVLNKARQALPSSSEIWISAAQLEESQGKNDNVNKIIKKAIKSL 489

Query:   667 PTD-RQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSAN-GVEIN--REHWFKEAIEAEKA 722
              +    +      + EA  +      +  +A+   +   G+E +  +  W  +A E    
Sbjct:   490 CSGVMNVMNRDKWIAEAEKSEKNQYYVTCQAIIYETIGMGIEDDDRKRIWVIDAEECLSR 549

Query:   723 GSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSI 782
             GS+ T  A+   I+        +K  W++ A+     G  E       +A    P  +++
Sbjct:   550 GSIKTANAIYAHILSIF---PTKKSVWLKVAQLEKQHGTKETLDQTLEKATQKCPQYENL 606

Query:   783 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTR 842
             WL  A  +   G       +L +A    P SE +W+   K   +   LRAA   +N    
Sbjct:   607 WLMYAKEKWISGDVAKAREILAQAFKFNPGSENIWVAAVKIESEMNELRAA---RN---- 659

Query:   843 ESLETLLQKAVAHCPKSEVLWLMGAK-SKWLAGDVPAARGILSLAFQANPNSEEIWLAAV 901
                  LL+KA      +E +W+  A   + L GD      ++    Q  PNS ++WL   
Sbjct:   660 -----LLKKA-REIAGTERIWMKSALLERELGGDQKLELSLIEQGLQKYPNSFKLWLMKA 713

Query:   902 KLESENN--EYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXX 959
             +LE       ++                  N N ++I L ++++  +   Y+        
Sbjct:   714 QLEERQAIANHQNNQNNQNNQNNQNNQNNQNNNLQQISLTSIEIIRQT--YKNATV---- 767

Query:   960 XXXSAPTP-RVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLD 1018
                  P    V I++++ E    N  RA  LL++A    P    +++   + E+      
Sbjct:   768 ---KCPNNGSVWIEASRFEKRNQNFNRARALLEQAKLKNPTDDDIFLEFVRFEDSLGNRK 824

Query:  1019 KAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRV 1078
             +A    +  I+  P S  LW  L  +E R     K    L     R  N   ++    ++
Sbjct:   825 QAATILALGIQASPKSGKLWAELIAMEPRHSQRNKCVDALN----RCNNDPYVFTQVSKI 880

Query:  1079 EIRAGLKDIANTMMAKALQECPNAGILWAE--AIFLEPRPQRKTKSVDALKKC-EHDPHV 1135
                 G  D A     +     P  G  WA   A  L+  P+ K +    LKKC E +P++
Sbjct:   881 FWMDGKLDKAKQWYQRVTTTFPEFGDGWAYYYAFILKFEPENKDQ---ILKKCVEAEPNL 937

 Score = 272 (100.8 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
 Identities = 99/390 (25%), Positives = 162/390 (41%)

Query:   746 KHT--WMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLL 803
             KH+  W+  A+     G    AR I AQA    P+ + +W+  A    N  T ++ + +L
Sbjct:   302 KHSPSWIAAAKLEVLAGKIVDARKIIAQACKECPTSEEVWIENA----NLQTPDNAKIVL 357

Query:   804 QKAVAHCPKSEVLWLMGAKSNK-----KSIWLRAAYFEKNHGT--RESLET--------L 848
              +AV   P S  +WL  A   K     K +  RA  F        +E++E         L
Sbjct:   358 AQAVRVIPHSVKIWLYAANLEKQLKMKKRVLRRALEFIPTSVKLWKEAVELEEPEDARIL 417

Query:   849 LQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENN 908
             L +AV   P +  LWL  A  +        AR +L+ A QA P+S EIW++A +LE    
Sbjct:   418 LGRAVECVPDNIDLWLALANLE----TYEKAREVLNKARQALPSSSEIWISAAQLEESQG 473

Query:   909 EYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSA---P 965
             + +                  N  + + W+A  + +SE N+Y                  
Sbjct:   474 KNDNVNKIIKKAIKSLCSGVMNVMNRDKWIAEAE-KSEKNQYYVTCQAIIYETIGMGIED 532

Query:   966 TPRVMIQSAKLEWCLD--NLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDT 1023
               R  I     E CL   +++ A  +    + +FP    +W+   Q+E+Q    +    T
Sbjct:   533 DDRKRIWVIDAEECLSRGSIKTANAIYAHILSIFPTKKSVWLKVAQLEKQHGTKETLDQT 592

Query:  1024 FSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAG 1083
               +A +KCP    LW+M A  +     + KAR +L +    NP    +W+AA+++E    
Sbjct:   593 LEKATQKCPQYENLWLMYAKEKWISGDVAKAREILAQAFKFNPGSENIWVAAVKIESEMN 652

Query:  1084 LKDIANTMMAKALQECPNAGILWAEAIFLE 1113
                 A  ++ KA +E      +W ++  LE
Sbjct:   653 ELRAARNLLKKA-REIAGTERIWMKSALLE 681

 Score = 173 (66.0 bits), Expect = 4.0e-96, Sum P(3) = 4.0e-96
 Identities = 53/166 (31%), Positives = 74/166 (44%)

Query:    56 ARLLLKSKHF-MGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVS-----DDRH--AA 107
             A +L K K F +    P GY+AG GRGA GFTTR DIG AR++ D+      DD+    +
Sbjct:     2 AHILQKDKRFFLYQEPPPGYIAGFGRGAVGFTTRLDIGTARNS-DIPGFPGRDDKSKLTS 60

Query:   108 PVKRKKKXXXXXXXXXXXXXXXXXXXGYGGS----LFNKDP-YDKDDEEADMIYEEIDXX 162
                 + +                    + GS    LF+ +  YD++D++AD I++ ID  
Sbjct:    61 NTGGEDEDEDEQSNKGGGGGDNGRFDEFEGSSTDKLFDSNKGYDQEDKDADAIWDAIDSK 120

Query:   163 XXXXXXXXXXXXXXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEW 208
                                     PKIQQ   DLK+ L TVS D+W
Sbjct:   121 MDSRRKKKREANEQLKIEKQRESRPKIQQHLQDLKQDLATVSEDQW 166

 Score = 168 (64.2 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
 Identities = 76/331 (22%), Positives = 131/331 (39%)

Query:   930 NPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPR-VMIQSAKLEWCLDNLERALQ 988
             NP     W+AA KLE    +               PT   V I++A L+   DN   A  
Sbjct:   300 NPKHSPSWIAAAKLEVLAGKIVDARKIIAQACKECPTSEEVWIENANLQ-TPDN---AKI 355

Query:   989 LLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERR 1048
             +L +A++V P   K+W+    +E+Q  +  +      +A++  P SV LW     LEE  
Sbjct:   356 VLAQAVRVIPHSVKIWLYAANLEKQLKMKKRV---LRRALEFIPTSVKLWKEAVELEEPE 412

Query:  1049 KMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAE 1108
                  AR +L +     P+  +LWLA   +E     +++ N    KA Q  P++  +W  
Sbjct:   413 D----ARILLGRAVECVPDNIDLWLALANLETYEKAREVLN----KARQALPSSSEIWIS 464

Query:  1109 AIFLEPRPQRKTKSVDAL-KKCEHD--PHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKT 1165
             A  LE   Q K  +V+ + KK        V+  +++  W     +         C  +  
Sbjct:   465 AAQLE-ESQGKNDNVNKIIKKAIKSLCSGVMNVMNRDKWIAEAEKSEKNQYYVTCQAIIY 523

Query:  1166 KSVDALKKCEHDPHVLLAVSKLFWCENKN--QKCREWFNRTVKIDPDLGDAWAYFYKFEI 1223
             +++      E D    + V     C ++   +     +   + I P     W    + E 
Sbjct:   524 ETIGM--GIEDDDRKRIWVIDAEECLSRGSIKTANAIYAHILSIFPTKKSVWLKVAQLEK 581

Query:  1224 INGTEETQAEVKKRCLAAEPKHGENWCRVAK 1254
              +GT+ET  +  ++     P++   W   AK
Sbjct:   582 QHGTKETLDQTLEKATQKCPQYENLWLMYAK 612

 Score = 123 (48.4 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
 Identities = 38/138 (27%), Positives = 65/138 (47%)

Query:   982 NLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIML 1041
             ++++A  L   A    P  +  W+   ++E     +  A    +QA K+CP S  +WI  
Sbjct:   285 DIKKARLLFKSATTSNPKHSPSWIAAAKLEVLAGKIVDARKIIAQACKECPTSEEVWIEN 344

Query:  1042 ANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPN 1101
             ANL+        A+ VL +     P+  ++WL A  +E +  +K     ++ +AL+  P 
Sbjct:   345 ANLQTPDN----AKIVLAQAVRVIPHSVKIWLYAANLEKQLKMK---KRVLRRALEFIPT 397

Query:  1102 AGILWAEAIFLE-PRPQR 1118
             +  LW EA+ LE P   R
Sbjct:   398 SVKLWKEAVELEEPEDAR 415

 Score = 117 (46.2 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
 Identities = 48/203 (23%), Positives = 81/203 (39%)

Query:  1053 KARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFL 1112
             KAR + +     NP  +  W+AA ++E+ AG    A  ++A+A +ECP +  +W E   L
Sbjct:   288 KARLLFKSATTSNPKHSPSWIAAAKLEVLAGKIVDARKIIAQACKECPTSEEVWIENANL 347

Query:  1113 EPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALK 1172
             +     K     A++   H   + L  + L     K  K  +   RR +     SV   K
Sbjct:   348 QTPDNAKIVLAQAVRVIPHSVKIWLYAANL----EKQLKMKKRVLRRALEFIPTSVKLWK 403

Query:  1173 KC-----EHDPHVLL--AVSKL-----FWCENKN----QKCREWFNRTVKIDPDLGDAWA 1216
             +        D  +LL  AV  +      W    N    +K RE  N+  +  P   + W 
Sbjct:   404 EAVELEEPEDARILLGRAVECVPDNIDLWLALANLETYEKAREVLNKARQALPSSSEIWI 463

Query:  1217 YFYKFEIINGTEETQAEVKKRCL 1239
                + E   G  +   ++ K+ +
Sbjct:   464 SAAQLEESQGKNDNVNKIIKKAI 486

 Score = 113 (44.8 bits), Expect = 2.9e-40, Sum P(2) = 2.9e-40
 Identities = 24/39 (61%), Positives = 28/39 (71%)

Query:    24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKS 62
             V G+T VDPKGYLTDL+S       ++ DIKKARLL KS
Sbjct:   257 VSGKTCVDPKGYLTDLRSKRIASDAEVGDIKKARLLFKS 295

 Score = 112 (44.5 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
 Identities = 70/303 (23%), Positives = 114/303 (37%)

Query:   931 PNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLL 990
             P+S +IWL A  LE +    +             PT  V +    +E  L+  E A  LL
Sbjct:   365 PHSVKIWLYAANLEKQ---LKMKKRVLRRALEFIPTS-VKLWKEAVE--LEEPEDARILL 418

Query:   991 DEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERR-- 1048
               A++  PD   LW+    +E      +KA +  ++A +  P S  +WI  A LEE +  
Sbjct:   419 GRAVECVPDNIDLWLALANLETY----EKAREVLNKARQALPSSSEIWISAAQLEESQGK 474

Query:  1049 -----KMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAG 1103
                  K++ KA   L  G +   N  + W+A    E     K+         + E    G
Sbjct:   475 NDNVNKIIKKAIKSLCSGVMNVMN-RDKWIA----EAEKSEKNQYYVTCQAIIYETIGMG 529

Query:  1104 ILWAEAIFLEPRPQRKTKSVDALKKCEHD-PHVL--LAVSKLFWCENKN-QKCHRSGSRR 1159
             I   +   +      +  S  ++K       H+L      K  W +    +K H  G++ 
Sbjct:   530 IEDDDRKRIWVIDAEECLSRGSIKTANAIYAHILSIFPTKKSVWLKVAQLEKQH--GTKE 587

Query:  1160 CMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFY 1219
              +    +   A +KC    ++ L  +K  W      K RE   +  K +P   + W    
Sbjct:   588 TLDQTLEK--ATQKCPQYENLWLMYAKEKWISGDVAKAREILAQAFKFNPGSENIWVAAV 645

Query:  1220 KFE 1222
             K E
Sbjct:   646 KIE 648

 Score = 98 (39.6 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
 Identities = 30/159 (18%), Positives = 66/159 (41%)

Query:   496 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEA 555
             +  +AR LL+  +  NP     ++   R E+  G  + A  ++  G + +  S  LW E 
Sbjct:   788 NFNRARALLEQAKLKNPTDDDIFLEFVRFEDSLGNRKQAATILALGIQASPKSGKLWAEL 847

Query:   556 ARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL---ETETKAKRRVYRKALEHIPNSVRL 612
               ++P  + R     A+        ++ + + +   + +    ++ Y++     P     
Sbjct:   848 IAMEPRHSQRNKCVDALNRCNNDPYVFTQVSKIFWMDGKLDKAKQWYQRVTTTFPEFGDG 907

Query:   613 WK---AAVELEDPEDARILLSRAVECCPTSVELWLALAR 648
             W    A +   +PE+   +L + VE  P   E W+ +++
Sbjct:   908 WAYYYAFILKFEPENKDQILKKCVEAEPNLGEHWIKVSK 946

 Score = 44 (20.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query:  1236 KRCLAAEPKHGENWCRVAK-NVSNWKL-PRETILSLVAKDLP 1275
             K    + PKH  +W   AK  V   K+     I++   K+ P
Sbjct:   294 KSATTSNPKHSPSWIAAAKLEVLAGKIVDARKIIAQACKECP 335

 Score = 39 (18.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
 Identities = 14/58 (24%), Positives = 22/58 (37%)

Query:  1195 QKCREWFNRTVKIDPDLGDAWAYFYKFEIING----TEETQAEVKKRCLAAEPKHGEN 1248
             +K R  F      +P    +W    K E++ G      +  A+  K C  +E    EN
Sbjct:   287 KKARLLFKSATTSNPKHSPSWIAAAKLEVLAGKIVDARKIIAQACKECPTSEEVWIEN 344

 Score = 37 (18.1 bits), Expect = 2.1e-141, Sum P(2) = 2.1e-141
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query:   882 ILSLAFQANPNSEEIWLAAVK 902
             IL    +A PN  E W+   K
Sbjct:   926 ILKKCVEAEPNLGEHWIKVSK 946


>POMBASE|SPBC6B1.07 [details] [associations]
            symbol:prp1 "U4/U6 x U5 tri-snRNP complex subunit Prp1"
            species:4896 "Schizosaccharomyces pombe" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
            evidence=IMP] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
            evidence=ISO] InterPro:IPR003107 InterPro:IPR010491
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            Pfam:PF06424 SMART:SM00028 SMART:SM00386 PomBase:SPBC6B1.07
            EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG0457
            Gene3D:1.25.40.10 GO:GO:0046540 GO:GO:0045292 EMBL:D83659
            EMBL:D83743 PIR:T45158 RefSeq:NP_596086.1 ProteinModelPortal:Q12381
            IntAct:Q12381 STRING:Q12381 EnsemblFungi:SPBC6B1.07.1
            GeneID:2541185 KEGG:spo:SPBC6B1.07 HOGENOM:HOG000116247 KO:K12855
            OMA:IWLRAAY OrthoDB:EOG4D82F8 NextBio:20802297 InterPro:IPR027108
            PANTHER:PTHR11246:SF1 Uniprot:Q12381
        Length = 906

 Score = 1287 (458.1 bits), Expect = 1.5e-164, Sum P(2) = 1.5e-164
 Identities = 277/673 (41%), Positives = 401/673 (59%)

Query:   234 FMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKXXXXXXXXXX 293
             F+ +  P  YVAG+GRGATGFTTRSD+GPA++    S +   A ++++K           
Sbjct:     8 FLNMQPPPNYVAGLGRGATGFTTRSDLGPAQELP--SQESIKAAIEQRKSEIEEEEDIDP 65

Query:   294 XXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXX 353
                          +LF   PYD +DEEAD IY+ ++                        
Sbjct:    66 RYQDPDNEV----ALFATAPYDHEDEEADKIYQSVEEHLSKRRKSQREKQEQLQKEKYEK 121

Query:   354 XXPKIQQQFSDLKRGLVTVSMDEWKNVPEVGD-ARNRKQRNPRAEKFTPLPDSVLRGNLG 412
               PK+  QF+DLKRGL T++ ++W N+PE GD  R ++ + PR E+F    D VL  +  
Sbjct:   122 ENPKVSSQFADLKRGLSTLTDEDWNNIPEPGDLTRKKRTKQPRRERFYATSDFVL-ASAR 180

Query:   413 GESTGAIDPNSGLMSQIPGTATPGMLTPSGDLDLRKMGQARNTLMNVKLNQISDSVVGQT 472
              E+  AI  N  + +Q  GT TP M       +  ++G AR+ ++ +KL Q S ++   +
Sbjct:   181 NENQ-AIS-NFAVDTQA-GTETPDM--NGTKTNFVEIGAARDKVLGIKLAQASSNLTSPS 235

Query:   473 VVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQ 532
              +DPKGYLT L SM+P    D+ DI+KAR LL+SV ETNP H   W+A+ARLEEV  K+ 
Sbjct:   236 TIDPKGYLTSLNSMVPKNANDLGDIRKARKLLQSVIETNPKHASGWVAAARLEEVANKLS 295

Query:   533 AARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETET 592
              A++LI+KGCE    SED+WLEA RL P   A+ +IA AV+ +P SV +W++A  LE + 
Sbjct:   296 QAQSLILKGCENCSRSEDVWLEAIRLHPAAEAKVIIANAVKKLPKSVTLWLEAEKLENQA 355

Query:   593 KAKRRVYRKALEHIPNSVRLWKAAVELEDPED-ARILLSRAVECCPTSVELWLALARLET 651
             + K+R+ +KALE  P SV LWK AV LE+  D ARILL+RAVE  P S++LWLALARLET
Sbjct:   356 QHKKRIIKKALEFNPTSVSLWKEAVNLEEEVDNARILLARAVELIPMSIDLWLALARLET 415

Query:   652 YENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREH 711
             YENA+KVLNKAR+ I T  ++W  AA+LEE  GN + V+KI+ R +S L A G  + R+ 
Sbjct:   416 YENAKKVLNKARQTIRTSHEVWIAAARLEEQQGNVSRVEKIMARGVSELQATGGMLQRDQ 475

Query:   712 WFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQ 771
             W  EA + E  G+V T QA+I   +G G+++ED+  TW++DA+S   +   +CARA++A 
Sbjct:   476 WLSEAEKCETEGAVITAQAIINTCLGVGLDEEDQFDTWLDDAQSFIARKCIDCARAVFAF 535

Query:   772 ALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLR 831
             +L  +P  + +WLRA   EK +GT ES+ ++L+KAV  CPK+E+LWL+ AK  K    + 
Sbjct:   536 SLRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAVESCPKAEILWLLYAKERKNVNDIA 595

Query:   832 AAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANP 891
              A   +N         +L +A  +   SE +WL   + +++  +   AR +L+ A +   
Sbjct:   596 GA---RN---------ILGRAFEYNSNSEEIWLAAVRIEFVNNENERARKLLARA-RIES 642

Query:   892 NSEEIWLAAVKLE 904
              +E IW  ++ LE
Sbjct:   643 GTERIWTKSISLE 655

 Score = 600 (216.3 bits), Expect = 9.0e-73, Sum P(2) = 9.0e-73
 Identities = 122/295 (41%), Positives = 175/295 (59%)

Query:   857 PKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXX 916
             PKSE LWL   + + L G   +   IL  A ++ P +E +WL   K     N+       
Sbjct:   541 PKSEKLWLRAVELEKLYGTTESVCSILEKAVESCPKAEILWLLYAKERKNVNDI------ 594

Query:   917 XXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKL 976
                          N NSEEIWLAAV++E  NNE E            + T R+  +S  L
Sbjct:   595 AGARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERARKLLARARIESGTERIWTKSISL 654

Query:   977 EWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP 1036
             E  LD  +RALQLL+ A+K++P + KL+MMKGQI E K  ++ A D +    K CP+S+P
Sbjct:   655 ERILDEKDRALQLLENALKIYPHYDKLYMMKGQIFEDKEQIELARDAYLAGTKVCPYSIP 714

Query:  1037 LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKAL 1096
             LW++LA LEE++ + I+AR V ++ +++NP    LWL  I++E+RAG        +AKAL
Sbjct:   715 LWLLLAKLEEKQSV-IRARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKAL 773

Query:  1097 QECPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQK 1151
             QECP++G+LW EAI+LEPR QRKT++ DAL+KCE + H+L  ++++ W E K  K
Sbjct:   774 QECPSSGLLWTEAIWLEPRAQRKTRATDALRKCEGNAHLLCTIARMLWLEKKADK 828

 Score = 553 (199.7 bits), Expect = 3.3e-67, Sum P(2) = 3.3e-67
 Identities = 171/605 (28%), Positives = 286/605 (47%)

Query:   529 GKVQAARNLIMKGCEENQTSEDLWLEAARLQPV----DTARAVIAQAVRHIPTSVRIWIK 584
             G ++ AR L+    E N      W+ AARL+ V      A+++I +   +   S  +W++
Sbjct:   258 GDIRKARKLLQSVIETNPKHASGWVAAARLEEVANKLSQAQSLILKGCENCSRSEDVWLE 317

Query:   585 AADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDP-EDARILLSRAVECCPTSVELW 643
             A  L    +AK  +   A++ +P SV LW  A +LE+  +  + ++ +A+E  PTSV LW
Sbjct:   318 AIRLHPAAEAKV-IIANAVKKLPKSVTLWLEAEKLENQAQHKKRIIKKALEFNPTSVSLW 376

Query:   644 LALARLET-YENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSA 702
                  LE   +NAR +L +A E IP    +W   A+LE     NA   K++++A  +   
Sbjct:   377 KEAVNLEEEVDNARILLARAVELIPMSIDLWLALARLETYE--NAK--KVLNKARQT--- 429

Query:   703 NGVEINREHWFKEAIEAEKAGSVHTCQALI-RAIIGY----GVEQEDRKHTWMEDAESCA 757
               +  + E W   A   E+ G+V   + ++ R +       G+ Q D+   W+ +AE C 
Sbjct:   430 --IRTSHEVWIAAARLEEQQGNVSRVEKIMARGVSELQATGGMLQRDQ---WLSEAEKCE 484

Query:   758 NQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLW 817
              +GA   A+AI    L     ++        F+      +  ++ + +    C ++   +
Sbjct:   485 TEGAVITAQAIINTCLGVGLDEED------QFDT---WLDDAQSFIARKCIDCARAVFAF 535

Query:   818 LMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVP 877
              +      + +WLRA   EK +GT ES+ ++L+KAV  CPK+E+LWL+ AK +    D+ 
Sbjct:   536 SLRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAVESCPKAEILWLLYAKERKNVNDIA 595

Query:   878 AARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIW 937
              AR IL  AF+ N NSEEIWLAAV++E  NNE E                     +E IW
Sbjct:   596 GARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERARKLLARARIES-------GTERIW 648

Query:   938 LAAVKLESENNEYEXXXXXXXXXXXSAPT-PRVMIQSAKLEWCLDNLERALQLLDEAIKV 996
               ++ LE   +E +             P   ++ +   ++    + +E A        KV
Sbjct:   649 TKSISLERILDEKDRALQLLENALKIYPHYDKLYMMKGQIFEDKEQIELARDAYLAGTKV 708

Query:   997 FPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARS 1056
              P    LW++  ++EE+++++ +A   F +A  K P +  LW+ L  +E R   + + R+
Sbjct:   709 CPYSIPLWLLLAKLEEKQSVI-RARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRA 767

Query:  1057 VLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECP-NAGILW--AEAIFLE 1113
              L K     P+   LW  AI +E RA  K    T    AL++C  NA +L   A  ++LE
Sbjct:   768 ALAKALQECPSSGLLWTEAIWLEPRAQRK----TRATDALRKCEGNAHLLCTIARMLWLE 823

Query:  1114 PRPQR 1118
              +  +
Sbjct:   824 KKADK 828

 Score = 336 (123.3 bits), Expect = 1.5e-164, Sum P(2) = 1.5e-164
 Identities = 91/339 (26%), Positives = 154/339 (45%)

Query:   931 PNSEEIWLAAVKLESENNEYEXXXXXXXXXXX-SAPTPRVMIQSAKLEWCLDNLERALQL 989
             P +E +WL   K     N+              ++ +  + + + ++E+  +  ERA +L
Sbjct:   575 PKAEILWLLYAKERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERARKL 634

Query:   990 LDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRK 1049
             L  A ++     ++W     +E   +  D+A      A+K  PH   L++M   + E ++
Sbjct:   635 LARA-RIESGTERIWTKSISLERILDEKDRALQLLENALKIYPHYDKLYMMKGQIFEDKE 693

Query:  1050 MLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEA 1109
              +  AR     G    P    LWL   ++E +  +   A  +  +A  + P    LW E 
Sbjct:   694 QIELARDAYLAGTKVCPYSIPLWLLLAKLEEKQSVIR-ARVVFDRAKVKNPKNEFLWLEL 752

Query:  1110 IFLEPRPQRKTKSVDALKKCEHD-PHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSV 1168
             I +E R    ++   AL K   + P   L  ++  W E + Q+            KT++ 
Sbjct:   753 IKMELRAGNISQVRAALAKALQECPSSGLLWTEAIWLEPRAQR------------KTRAT 800

Query:  1169 DALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTE 1228
             DAL+KCE + H+L  ++++ W E K  K R WF + VK D D GD W +FYK+ +  G E
Sbjct:   801 DALRKCEGNAHLLCTIARMLWLEKKADKARSWFLKAVKADQDNGDVWCWFYKYSLEAGNE 860

Query:  1229 ETQAEVKKRCLAAEPKHGENWCRVAKNVSNW-KLPRETI 1266
             + Q EV      A+P HG  W  + K++ N  K P+E +
Sbjct:   861 DQQKEVLTSFETADPHHGYFWPSITKDIKNSRKTPQELL 899

 Score = 210 (79.0 bits), Expect = 9.0e-73, Sum P(2) = 9.0e-73
 Identities = 49/146 (33%), Positives = 71/146 (48%)

Query:    65 FMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKXXXXXXXXXX 124
             F+ +  P  YVAG+GRGATGFTTRSD+GPA++    S +   A ++++K           
Sbjct:     8 FLNMQPPPNYVAGLGRGATGFTTRSDLGPAQELP--SQESIKAAIEQRKSEIEEEEDIDP 65

Query:   125 XXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXX 184
                          +LF   PYD +DEEAD IY+ ++                        
Sbjct:    66 RYQDPDNEV----ALFATAPYDHEDEEADKIYQSVEEHLSKRRKSQREKQEQLQKEKYEK 121

Query:   185 XXPKIQQQFSDLKRGLVTVSMDEWKN 210
               PK+  QF+DLKRGL T++ ++W N
Sbjct:   122 ENPKVSSQFADLKRGLSTLTDEDWNN 147

 Score = 130 (50.8 bits), Expect = 5.9e-21, Sum P(2) = 5.9e-21
 Identities = 36/134 (26%), Positives = 62/134 (46%)

Query:   980 LDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWI 1039
             L ++ +A +LL   I+  P  A  W+   ++EE  N L +A     +  + C  S  +W+
Sbjct:   257 LGDIRKARKLLQSVIETNPKHASGWVAAARLEEVANKLSQAQSLILKGCENCSRSEDVWL 316

Query:  1040 MLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQEC 1099
                 L    +    A+ ++     + P    LWL A ++E +A  K     ++ KAL+  
Sbjct:   317 EAIRLHPAAE----AKVIIANAVKKLPKSVTLWLEAEKLENQAQHK---KRIIKKALEFN 369

Query:  1100 PNAGILWAEAIFLE 1113
             P +  LW EA+ LE
Sbjct:   370 PTSVSLWKEAVNLE 383

 Score = 126 (49.4 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
 Identities = 47/210 (22%), Positives = 90/210 (42%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             +++  +A  LL++  +  P++   ++   ++ E   +++ AR+  + G +    S  LWL
Sbjct:   658 LDEKDRALQLLENALKIYPHYDKLYMMKGQIFEDKEQIELARDAYLAGTKVCPYSIPLWL 717

Query:   554 EAARL---QPVDTARAVIAQAVRHIPTSVRIWIKAADLETET---KAKRRVYRKALEHIP 607
               A+L   Q V  AR V  +A    P +  +W++   +E         R    KAL+  P
Sbjct:   718 LLAKLEEKQSVIRARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQECP 777

Query:   608 NSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARL----ETYENARKVLNKAR 663
             +S  LW  A+ LE     +   + A+  C  +  L   +AR+    +  + AR    KA 
Sbjct:   778 SSGLLWTEAIWLEPRAQRKTRATDALRKCEGNAHLLCTIARMLWLEKKADKARSWFLKAV 837

Query:   664 ENIPTDRQIWTTAAKLEEAHGNNAMVDKII 693
             +    +  +W    K     GN     +++
Sbjct:   838 KADQDNGDVWCWFYKYSLEAGNEDQQKEVL 867

 Score = 117 (46.2 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
 Identities = 36/115 (31%), Positives = 54/115 (46%)

Query:  1019 KAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRV 1078
             KA       I+  P     W+  A LEE    L +A+S++ KG        ++WL AIR+
Sbjct:   262 KARKLLQSVIETNPKHASGWVAAARLEEVANKLSQAQSLILKGCENCSRSEDVWLEAIRL 321

Query:  1079 EIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDP 1133
                A  K I    +A A+++ P +  LW EA  LE + Q K + +   K  E +P
Sbjct:   322 HPAAEAKVI----IANAVKKLPKSVTLWLEAEKLENQAQHKKRIIK--KALEFNP 370

 Score = 113 (44.8 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
 Identities = 51/198 (25%), Positives = 84/198 (42%)

Query:   493 DINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLW 552
             D   I+ AR    +  +  P   P W+  A+LEE    ++A R +  +   +N  +E LW
Sbjct:   691 DKEQIELARDAYLAGTKVCPYSIPLWLLLAKLEEKQSVIRA-RVVFDRAKVKNPKNEFLW 749

Query:   553 LEAARLQ----PVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPN 608
             LE  +++     +   RA +A+A++  P+S  +W +A  LE   + K R    AL     
Sbjct:   750 LELIKMELRAGNISQVRAALAKALQECPSSGLLWTEAIWLEPRAQRKTRA-TDALRKCEG 808

Query:   609 SVRLWKAAVE---LEDPED-ARILLSRAVECCPTSVELWLALAR--LET-YENARK-VLN 660
             +  L         LE   D AR    +AV+    + ++W    +  LE   E+ +K VL 
Sbjct:   809 NAHLLCTIARMLWLEKKADKARSWFLKAVKADQDNGDVWCWFYKYSLEAGNEDQQKEVLT 868

Query:   661 KARENIPTDRQIWTTAAK 678
                   P     W +  K
Sbjct:   869 SFETADPHHGYFWPSITK 886

 Score = 112 (44.5 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query:    16 KLKTQLAYVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKS 62
             KL    + +   + +DPKGYLT L SM+P    D+ DI+KAR LL+S
Sbjct:   223 KLAQASSNLTSPSTIDPKGYLTSLNSMVPKNANDLGDIRKARKLLQS 269

 Score = 112 (44.5 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
 Identities = 32/98 (32%), Positives = 47/98 (47%)

Query:  1053 KARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFL 1112
             KAR +L+     NP  A  W+AA R+E  A     A +++ K  + C  +  +W EAI L
Sbjct:   262 KARKLLQSVIETNPKHASGWVAAARLEEVANKLSQAQSLILKGCENCSRSEDVWLEAIRL 321

Query:  1113 EPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQ 1150
              P  + K    +A+KK      + L   KL   EN+ Q
Sbjct:   322 HPAAEAKVIIANAVKKLPKSVTLWLEAEKL---ENQAQ 356

 Score = 108 (43.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
 Identities = 42/173 (24%), Positives = 78/173 (45%)

Query:   971 IQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKK 1030
             + +A+LE   + L +A  L+ +  +       +W+   ++        +A    + A+KK
Sbjct:   282 VAAARLEEVANKLSQAQSLILKGCENCSRSEDVWLEAIRLHPAA----EAKVIIANAVKK 337

Query:  1031 CPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANT 1090
              P SV LW+    LE + +   K R +++K    NP    LW  A+ +E      D A  
Sbjct:   338 LPKSVTLWLEAEKLENQAQH--KKR-IIKKALEFNPTSVSLWKEAVNLEEEV---DNARI 391

Query:  1091 MMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDPH-VLLAVSKL 1142
             ++A+A++  P +  LW     LE     K K ++  ++     H V +A ++L
Sbjct:   392 LLARAVELIPMSIDLWLALARLETYENAK-KVLNKARQTIRTSHEVWIAAARL 443

 Score = 103 (41.3 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
 Identities = 37/149 (24%), Positives = 60/149 (40%)

Query:   765 ARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSN 824
             AR ++ +A    P  + +WL     E   G    +   L KA+  CP S +LW       
Sbjct:   731 ARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQECPSSGLLWT------ 784

Query:   825 KKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILS 884
              ++IWL      K   T ++L      A   C  + +LWL     K        AR    
Sbjct:   785 -EAIWLEPRAQRKTRAT-DALRKCEGNAHLLCTIARMLWLEKKADK--------ARSWFL 834

Query:   885 LAFQANPNSEEIWLAAVK--LESENNEYE 911
              A +A+ ++ ++W    K  LE+ N + +
Sbjct:   835 KAVKADQDNGDVWCWFYKYSLEAGNEDQQ 863

 Score = 90 (36.7 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
 Identities = 34/166 (20%), Positives = 70/166 (42%)

Query:   499 KARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARL 558
             +AR++    +  NP +   W+   ++E   G +   R  + K  +E  +S  LW EA  L
Sbjct:   730 RARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQECPSSGLLWTEAIWL 789

Query:   559 QPVDTARAVIAQAVRHIPTSVRIWIKAAD---LETETKAKRRVYRKALEHIPNSVRLW-- 613
             +P    +     A+R    +  +    A    LE +    R  + KA++   ++  +W  
Sbjct:   790 EPRAQRKTRATDALRKCEGNAHLLCTIARMLWLEKKADKARSWFLKAVKADQDNGDVWCW 849

Query:   614 --KAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARK 657
               K ++E  + +  + +L+      P     W ++ +    +N+RK
Sbjct:   850 FYKYSLEAGNEDQQKEVLTSFETADPHHGYFWPSITK--DIKNSRK 893

 Score = 38 (18.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query:  1239 LAAEPKHGENWCRVAK--NVSNWKLPRETILSL 1269
             +   PKH   W   A+   V+N KL +   L L
Sbjct:   271 IETNPKHASGWVAAARLEEVAN-KLSQAQSLIL 302


>WB|WBGene00013343 [details] [associations]
            symbol:prp-6 species:6239 "Caenorhabditis elegans"
            [GO:0005622 "intracellular" evidence=IEA] [GO:0006396 "RNA
            processing" evidence=IEA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040015 "negative regulation of
            multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
            [GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
            [GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
            evidence=IMP] InterPro:IPR003107 InterPro:IPR010491
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            Pfam:PF06424 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
            SMART:SM00386 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0018996
            GO:GO:0000003 eggNOG:COG0457 Gene3D:1.25.40.10 GO:GO:0040039
            GO:GO:0040015 InterPro:IPR013105 Pfam:PF07719 GO:GO:0000398
            EMBL:AL132898 HOGENOM:HOG000116247 KO:K12855 OMA:IWLRAAY
            InterPro:IPR027108 PANTHER:PTHR11246:SF1
            GeneTree:ENSGT00550000075016 RefSeq:NP_507525.1
            ProteinModelPortal:Q9GRZ2 SMR:Q9GRZ2 STRING:Q9GRZ2 PaxDb:Q9GRZ2
            EnsemblMetazoa:Y59A8B.6.1 EnsemblMetazoa:Y59A8B.6.2 GeneID:180180
            KEGG:cel:CELE_Y59A8B.6 UCSC:Y59A8B.6.1 CTD:180180 WormBase:Y59A8B.6
            InParanoid:Q9GRZ2 NextBio:908332 Uniprot:Q9GRZ2
        Length = 968

 Score = 1318 (469.0 bits), Expect = 5.8e-163, Sum P(2) = 5.8e-163
 Identities = 273/507 (53%), Positives = 344/507 (67%)

Query:   400 TPLPDSVLRGNLGGESTGAIDPNSGLMSQIPGTAT--PGMLTPSGDLDLRKMGQARNTLM 457
             TP     +    GG    A    SG+M+  PG  +  P   T S DLDL K+GQARN +M
Sbjct:   221 TPFASGFMSTLGGGGGAAAAGAKSGIMT--PGWKSDIPSSGT-STDLDLVKIGQARNKIM 277

Query:   458 NVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPA 517
             +++L Q+SDSV GQTVVDPKGYLTD+QS+IP  GGD+ DIKKAR+LLKSVRETNP HPPA
Sbjct:   278 DMQLTQVSDSVTGQTVVDPKGYLTDMQSIIPQMGGDLQDIKKARMLLKSVRETNPRHPPA 337

Query:   518 WIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPT 577
             W+ASA LEE  GK+Q ARN IM+GCE+ + SE+LWL A RL P +  R+++A AVR  P 
Sbjct:   338 WVASAVLEEQAGKLQTARNFIMEGCEKIKNSEELWLHAIRLHPPELGRSIVANAVRSCPH 397

Query:   578 SVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCP 637
             SVR+W KA+DLE + K K++V RKALE IP+SV+LWKAAVELEDPEDARILL+RAVECC 
Sbjct:   398 SVRLWCKASDLEQDLKDKKKVLRKALEQIPSSVKLWKAAVELEDPEDARILLTRAVECCS 457

Query:   638 TSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRAL 697
             +S E+WLALARLETYENARKVLNKARE+IPTDR IW +AA+LEE  G   MVDKI+ +A+
Sbjct:   458 SSTEMWLALARLETYENARKVLNKAREHIPTDRHIWLSAARLEETRGQKDMVDKIVAKAM 517

Query:   698 SSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCA 757
             SSL  N VEINR+ W K+A++AE A    TCQA+IR +IG GVE ED++ TW+ DAE+  
Sbjct:   518 SSLKVNQVEINRDQWLKDAVDAEMAKCPITCQAIIRNVIGLGVEDEDKRTTWLADAENFE 577

Query:   758 NQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLW 817
              + A+ C R +YA AL  F  K+SIW  A +FE+ HG+ +  E +L KA    P+ E  W
Sbjct:   578 KEEAFTCVRTVYAIALKEFSRKRSIWDAAIHFEREHGSLDEHEAILLKACETVPEVEDYW 637

Query:   818 LMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVP 877
             LM AK       LR  +  K  G  E+ +TL+     H  +SE +WL   K +       
Sbjct:   638 LMLAK-------LR--FVNKRVG--EARDTLMSAFEKHGHQSEKIWLAATKIEIETDQFD 686

Query:   878 AARGILSLAFQANPNSEEIWLAAVKLE 904
              ARG+   A +A   S  +W+     E
Sbjct:   687 TARGLFGKA-RAKAPSARVWMKNAHFE 712

 Score = 756 (271.2 bits), Expect = 2.3e-74, P = 2.3e-74
 Identities = 234/718 (32%), Positives = 342/718 (47%)

Query:   223 PIPLVNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR-- 280
             P  LVN+ KK FMG+PAP GYV GVGRGATGFTTRSDIGPARD  ++ +     P  +  
Sbjct:     6 PGSLVNKTKKFFMGMPAPTGYVPGVGRGATGFTTRSDIGPARDPTELPEAGPVGPSPQGA 65

Query:   281 --------KKKXXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXX 332
                     K+                    GY GSLF+KDPYD++DE+AD IY E+D   
Sbjct:    66 SSSSAPPAKRARDDDGDGEDLNEANYDEFSGYSGSLFSKDPYDQEDEDADRIYNEVDDRL 125

Query:   333 XXXXXXXXXXXXXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQR 392
                                    PKIQQ F DLKR L  V+ DEW+ +PEVGD RN+ +R
Sbjct:   126 DERHKERREKKYKELVELFHKDRPKIQQGFQDLKRQLAEVTEDEWQAIPEVGDMRNKAKR 185

Query:   393 NPRAEKFTPLPDSVLRGNLG-GESTGAIDPNSGLMSQIPGTATPGMLTPSGDLDLRKMGQ 451
             N RAEKFTP+PDS++  N+  G+ + +ID  +GL +     A+  M T  G       G 
Sbjct:   186 NARAEKFTPVPDSIIAMNMNYGQMSHSIDSGNGLTTPF---ASGFMSTLGGGGGAAAAG- 241

Query:   452 ARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSM-IPTYGGDINDIKKARLLLKSVRET 510
             A++ +M       SD       +   G  TDL  + I      I D++  ++   SV   
Sbjct:   242 AKSGIMTPGWK--SD-------IPSSGTSTDLDLVKIGQARNKIMDMQLTQVS-DSVTGQ 291

Query:   511 NPNHPPAWIASAR--LEEVTGKVQ---AARNLIMKGCEENQTSEDLWLEAARLQP----V 561
                 P  ++   +  + ++ G +Q    AR L+    E N      W+ +A L+     +
Sbjct:   292 TVVDPKGYLTDMQSIIPQMGGDLQDIKKARMLLKSVRETNPRHPPAWVASAVLEEQAGKL 351

Query:   562 DTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELE- 620
              TAR  I +    I  S  +W+ A  L    +  R +   A+   P+SVRLW  A +LE 
Sbjct:   352 QTARNFIMEGCEKIKNSEELWLHAIRLHPP-ELGRSIVANAVRSCPHSVRLWCKASDLEQ 410

Query:   621 DPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLE 680
             D +D + +L +A+E  P+SV+LW A   LE  E+AR +L +A E   +  ++W   A+LE
Sbjct:   411 DLKDKKKVLRKALEQIPSSVKLWKAAVELEDPEDARILLTRAVECCSSSTEMWLALARLE 470

Query:   681 EAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALI-RAIIGYG 739
                  NA   K++++A   +  +     R  W   A   E  G       ++ +A+    
Sbjct:   471 TYE--NAR--KVLNKAREHIPTD-----RHIWLSAARLEETRGQKDMVDKIVAKAMSSLK 521

Query:   740 VEQ-EDRKHTWMEDAESCANQGAYECARAIYAQALATF---PSKKSIWLR-AAYFEKNHG 794
             V Q E  +  W++DA            +AI    +        K++ WL  A  FEK   
Sbjct:   522 VNQVEINRDQWLKDAVDAEMAKCPITCQAIIRNVIGLGVEDEDKRTTWLADAENFEK--- 578

Query:   795 TRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVA 854
               E   T ++   A   K          S K+SIW  A +FE+ HG+ +  E +L KA  
Sbjct:   579 --EEAFTCVRTVYAIALKEF--------SRKRSIWDAAIHFEREHGSLDEHEAILLKACE 628

Query:   855 HCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPN-SEEIWLAAVKLESENNEYE 911
               P+ E  WLM AK +++   V  AR  L  AF+ + + SE+IWLAA K+E E ++++
Sbjct:   629 TVPEVEDYWLMLAKLRFVNKRVGEARDTLMSAFEKHGHQSEKIWLAATKIEIETDQFD 686

 Score = 664 (238.8 bits), Expect = 1.8e-88, Sum P(2) = 1.8e-88
 Identities = 195/669 (29%), Positives = 306/669 (45%)

Query:   587 DLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDP----EDARILLSRAVECCPTSVEL 642
             DL+   KA R + +   E  P     W A+  LE+     + AR  +    E    S EL
Sbjct:   313 DLQDIKKA-RMLLKSVRETNPRHPPAWVASAVLEEQAGKLQTARNFIMEGCEKIKNSEEL 371

Query:   643 WLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEE-AHGNNAMVDKIIDRALSSLS 701
             WL   RL   E  R ++  A  + P   ++W  A+ LE+       ++ K +++  SS+ 
Sbjct:   372 WLHAIRLHPPELGRSIVANAVRSCPHSVRLWCKASDLEQDLKDKKKVLRKALEQIPSSVK 431

Query:   702 A--NGVEINREH----WFKEAIEAEKAGSVHTCQALIRA--------IIGYGVEQ--EDR 745
                  VE+            A+E   + S     AL R         ++    E    DR
Sbjct:   432 LWKAAVELEDPEDARILLTRAVEC-CSSSTEMWLALARLETYENARKVLNKAREHIPTDR 490

Query:   746 KHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQK 805
              H W+  A     +G  +    I A+A++      S+ +      ++   +++++  + K
Sbjct:   491 -HIWLSAARLEETRGQKDMVDKIVAKAMS------SLKVNQVEINRDQWLKDAVDAEMAK 543

Query:   806 AVAHCPK--SEVLWLMGAKSNKKSIWLR-AAYFEKNHGTRESLETLLQKAVAHCPKSEVL 862
                 C      V+ L     +K++ WL  A  FEK       + T+   A+    +   +
Sbjct:   544 CPITCQAIIRNVIGLGVEDEDKRTTWLADAENFEKEEAFT-CVRTVYAIALKEFSRKRSI 602

Query:   863 WLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXX 922
             W      +   G +     IL  A +  P  E+ WL   KL   N               
Sbjct:   603 WDAAIHFEREHGSLDEHEAILLKACETVPEVEDYWLMLAKLRFVNKRV-----GEARDTL 657

Query:   923 XXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDN 982
                       SE+IWLAA K+E E ++++            AP+ RV +++A  EWCL N
Sbjct:   658 MSAFEKHGHQSEKIWLAATKIEIETDQFDTARGLFGKARAKAPSARVWMKNAHFEWCLGN 717

Query:   983 LERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLA 1042
             +E A +L +E I+ + DF K++++ GQ+ EQ N +  A   ++Q I+KCP  +PLWI+L 
Sbjct:   718 VEEAKRLCEECIQKYDDFHKIYLVLGQVLEQMNDVHGARLAYTQGIRKCPGVIPLWILLV 777

Query:  1043 NLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNA 1102
              LEE+   ++KAR  LEK RLRNP   +LWL ++R E R G  ++A   M++ALQEC  +
Sbjct:   778 RLEEKAGQIVKARVDLEKARLRNPKNDDLWLESVRFEQRVGCPEMAKERMSRALQECEGS 837

Query:  1103 GILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMG 1162
             G LWAEAI++E    R+ KS+DALKKCEH+PHVL+A ++LFW E K +K  R    R + 
Sbjct:   838 GKLWAEAIWMEGPHGRRAKSIDALKKCEHNPHVLIAAARLFWSERKIKKA-REWFVRAVN 896

Query:  1163 VKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFE 1222
             +   + DA           LA  ++     K +  +  F + V  +P  GD W    K +
Sbjct:   897 LDPDNGDAFAN-------FLAFEQI---HGKEEDRKSVFKKCVTSEPRYGDLWQSVSK-D 945

Query:  1223 IINGTEETQ 1231
              IN    T+
Sbjct:   946 PINWRRTTE 954

 Score = 456 (165.6 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
 Identities = 150/551 (27%), Positives = 239/551 (43%)

Query:   763 ECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLM--- 819
             E AR +  +A+    S   +WL  A  E    T E+   +L KA  H P    +WL    
Sbjct:   443 EDARILLTRAVECCSSSTEMWLALARLE----TYENARKVLNKAREHIPTDRHIWLSAAR 498

Query:   820 -----GAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAV----AHCP---KSEVLWLMGA 867
                  G K     I  +A    K +    + +  L+ AV    A CP   ++ +  ++G 
Sbjct:   499 LEETRGQKDMVDKIVAKAMSSLKVNQVEINRDQWLKDAVDAEMAKCPITCQAIIRNVIGL 558

Query:   868 -------KSKWLAGD--------VPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEX 912
                    ++ WLA              R + ++A +       IW AA+  E E+   + 
Sbjct:   559 GVEDEDKRTTWLADAENFEKEEAFTCVRTVYAIALKEFSRKRSIWDAAIHFEREHGSLDE 618

Query:   913 XXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEY-EXXXXXXXXXXXSA-PTPRVM 970
                               P  E+ WL   KL   N    E               + ++ 
Sbjct:   619 HEAILLKACETV------PEVEDYWLMLAKLRFVNKRVGEARDTLMSAFEKHGHQSEKIW 672

Query:   971 IQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKK 1030
             + + K+E   D  + A  L  +A    P  A++WM     E     +++A     + I+K
Sbjct:   673 LAATKIEIETDQFDTARGLFGKARAKAPS-ARVWMKNAHFEWCLGNVEEAKRLCEECIQK 731

Query:  1031 CPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANT 1090
                   ++++L  + E+   +  AR    +G  + P    LW+  +R+E +AG    A  
Sbjct:   732 YDDFHKIYLVLGQVLEQMNDVHGARLAYTQGIRKCPGVIPLWILLVRLEEKAGQIVKARV 791

Query:  1091 MMAKALQECPNAGILWAEAIFLEPR---PQR-KTKSVDALKKCEHDPHVLLAVSKLFWCE 1146
              + KA    P    LW E++  E R   P+  K +   AL++CE    +    ++  W E
Sbjct:   792 DLEKARLRNPKNDDLWLESVRFEQRVGCPEMAKERMSRALQECEGSGKLW---AEAIWME 848

Query:  1147 NKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVK 1206
               +            G + KS+DALKKCEH+PHVL+A ++LFW E K +K REWF R V 
Sbjct:   849 GPH------------GRRAKSIDALKKCEHNPHVLIAAARLFWSERKIKKAREWFVRAVN 896

Query:  1207 IDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAEPKHGENWCRVAKNVSNWKLPRETI 1266
             +DPD GDA+A F  FE I+G EE +  V K+C+ +EP++G+ W  V+K+  NW+   E I
Sbjct:   897 LDPDNGDAFANFLAFEQIHGKEEDRKSVFKKCVTSEPRYGDLWQSVSKDPINWRRTTEEI 956

Query:  1267 LSLVAKDLPIP 1277
             L L  + + +P
Sbjct:   957 LQLATQKIKVP 967

 Score = 290 (107.1 bits), Expect = 5.8e-163, Sum P(2) = 5.8e-163
 Identities = 66/157 (42%), Positives = 79/157 (50%)

Query:    63 KHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR----------K 112
             K FMG+PAP GYV GVGRGATGFTTRSDIGPARD  ++ +     P  +          K
Sbjct:    15 KFFMGMPAPTGYVPGVGRGATGFTTRSDIGPARDPTELPEAGPVGPSPQGASSSSAPPAK 74

Query:   113 KKXXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXX 172
             +                    GY GSLF+KDPYD++DE+AD IY E+D            
Sbjct:    75 RARDDDGDGEDLNEANYDEFSGYSGSLFSKDPYDQEDEDADRIYNEVDDRLDERHKERRE 134

Query:   173 XXXXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWK 209
                           PKIQQ F DLKR L  V+ DEW+
Sbjct:   135 KKYKELVELFHKDRPKIQQGFQDLKRQLAEVTEDEWQ 171

 Score = 166 (63.5 bits), Expect = 2.1e-75, Sum P(2) = 2.1e-75
 Identities = 36/59 (61%), Positives = 43/59 (72%)

Query:    19 TQLA-YVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
             TQ++  V GQTVVDPKGYLTD+QS+IP  GGD+ DIKKAR+LLKS        P  +VA
Sbjct:   282 TQVSDSVTGQTVVDPKGYLTDMQSIIPQMGGDLQDIKKARMLLKSVRETNPRHPPAWVA 340

 Score = 140 (54.3 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
 Identities = 57/200 (28%), Positives = 96/200 (48%)

Query:   494 INDIKKARLLL-KSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLW 552
             +ND+  ARL   + +R+  P   P WI   RLEE  G++  AR  + K    N  ++DLW
Sbjct:   749 MNDVHGARLAYTQGIRKC-PGVIPLWILLVRLEEKAGQIVKARVDLEKARLRNPKNDDLW 807

Query:   553 LEAARL-QPV---DTARAVIAQAVRHIPTSVRIWIKAADLETE--TKAKRRVYRKALEHI 606
             LE+ R  Q V   + A+  +++A++    S ++W +A  +E     +AK     K  EH 
Sbjct:   808 LESVRFEQRVGCPEMAKERMSRALQECEGSGKLWAEAIWMEGPHGRRAKSIDALKKCEHN 867

Query:   607 PN----SVRLWKAAVELEDPEDARILLSRAVECCPTSVELW---LALARLETYENARK-V 658
             P+    + RL+ +  +++    AR    RAV   P + + +   LA  ++   E  RK V
Sbjct:   868 PHVLIAAARLFWSERKIKK---AREWFVRAVNLDPDNGDAFANFLAFEQIHGKEEDRKSV 924

Query:   659 LNKARENIPTDRQIWTTAAK 678
               K   + P    +W + +K
Sbjct:   925 FKKCVTSEPRYGDLWQSVSK 944

 Score = 118 (46.6 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
 Identities = 49/191 (25%), Positives = 77/191 (40%)

Query:   500 ARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAAR-- 557
             AR L    R   P+    W+ +A  E   G V+ A+ L  +  ++      ++L   +  
Sbjct:   688 ARGLFGKARAKAPS-ARVWMKNAHFEWCLGNVEEAKRLCEECIQKYDDFHKIYLVLGQVL 746

Query:   558 --LQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETK--AKRRV-YRKALEHIPNSVRL 612
               +  V  AR    Q +R  P  + +WI    LE +     K RV   KA    P +  L
Sbjct:   747 EQMNDVHGARLAYTQGIRKCPGVIPLWILLVRLEEKAGQIVKARVDLEKARLRNPKNDDL 806

Query:   613 WKAAVELED----PEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPT 668
             W  +V  E     PE A+  +SRA++ C  S +LW     +E     R     A +    
Sbjct:   807 WLESVRFEQRVGCPEMAKERMSRALQECEGSGKLWAEAIWMEGPHGRRAKSIDALKKCEH 866

Query:   669 DRQIWTTAAKL 679
             +  +   AA+L
Sbjct:   867 NPHVLIAAARL 877

 Score = 112 (44.5 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
 Identities = 52/223 (23%), Positives = 96/223 (43%)

Query:   492 GDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDL 551
             G++ + K  RL  + +++ +  H    +    LE++   V  AR    +G  +      L
Sbjct:   716 GNVEEAK--RLCEECIQKYDDFHKIYLVLGQVLEQMND-VHGARLAYTQGIRKCPGVIPL 772

Query:   552 WLEAARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLETET----KAKRRVYRKAL 603
             W+   RL+     +  AR  + +A    P +  +W+++   E        AK R+ R AL
Sbjct:   773 WILLVRLEEKAGQIVKARVDLEKARLRNPKNDDLWLESVRFEQRVGCPEMAKERMSR-AL 831

Query:   604 EHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKAR 663
             +    S +LW  A+ +E P   R     A++ C  +  + +A ARL  + + RK+  KAR
Sbjct:   832 QECEGSGKLWAEAIWMEGPHGRRAKSIDALKKCEHNPHVLIAAARL--FWSERKI-KKAR 888

Query:   664 E------NI-PTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSS 699
             E      N+ P +   +      E+ HG       +  + ++S
Sbjct:   889 EWFVRAVNLDPDNGDAFANFLAFEQIHGKEEDRKSVFKKCVTS 931

 Score = 37 (18.1 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query:   189 IQQQFSDLKRGLVTVSMDEWKNEGQVVGQAIPPPPIPLVNRN 230
             + +  S LK   V ++ D+W  +      A  P     + RN
Sbjct:   513 VAKAMSSLKVNQVEINRDQWLKDAVDAEMAKCPITCQAIIRN 554


>TAIR|locus:2128751 [details] [associations]
            symbol:EMB2770 "EMBRYO DEFECTIVE 2770" species:3702
            "Arabidopsis thaliana" [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006396 "RNA
            processing" evidence=IEA] [GO:0009409 "response to cold"
            evidence=IMP] InterPro:IPR003107 InterPro:IPR010491
            InterPro:IPR011990 InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293
            SMART:SM00386 GO:GO:0005634 EMBL:CP002687 GO:GO:0009409
            Gene3D:1.25.40.10 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0000398
            EMBL:AL161496 EMBL:AF071527 GO:GO:0019252 HOGENOM:HOG000116247
            KO:K12855 OMA:IWLRAAY InterPro:IPR027108 PANTHER:PTHR11246:SF1
            GO:GO:0009568 EMBL:AY059720 EMBL:AY142510 IPI:IPI00530735
            PIR:E85043 RefSeq:NP_192252.1 UniGene:At.3947
            ProteinModelPortal:Q9ZT71 SMR:Q9ZT71 STRING:Q9ZT71 PRIDE:Q9ZT71
            EnsemblPlants:AT4G03430.1 GeneID:827925 KEGG:ath:AT4G03430
            TAIR:At4g03430 InParanoid:Q9ZT71 PhylomeDB:Q9ZT71
            ProtClustDB:CLSN2685941 Genevestigator:Q9ZT71 Uniprot:Q9ZT71
        Length = 1029

 Score = 1554 (552.1 bits), Expect = 1.6e-159, P = 1.6e-159
 Identities = 378/917 (41%), Positives = 515/917 (56%)

Query:   217 QAIPPPPIPLVNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRH-- 274
             QA PP P       +  F+    P  YVAG+GRGATGFTTRSDIGPAR A D+ D     
Sbjct:    87 QAAPPKP-------RLDFLNSKPPSNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSALA 139

Query:   275 --AAP-VKR------KKKXXXXXXXXXXXXXXXXXXXGYGGS---LFNKDPYDKDDEEAD 322
               AAP V R      + +                    + G+   LF    YD+DD+EAD
Sbjct:   140 TAAAPGVGRGAGKPSEAEAEDDEEAEEKRYDENQTFDEFEGNDVGLFANAEYDEDDKEAD 199

Query:   323 MIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNVPE 382
              I+E ID                          PKI +QF+DLKR L T+S DEW ++PE
Sbjct:   200 AIWESIDQRMDSRRKDRREAKLKEEIEKYRASNPKITEQFADLKRKLHTLSADEWDSIPE 259

Query:   383 VGD--ARNRKQRNPRAEKFTPLPDSVL-RGNLGGESTGAIDPNSGLMSQIPGTATPGMLT 439
             +GD   RN+K++    E F P+PD++L +     E   A+DP S       G+ TP   T
Sbjct:   260 IGDYSLRNKKKK---FESFVPIPDTLLEKAKKEKELVMALDPKSRAAG---GSETPWGQT 313

Query:   440 PSGDLDLRKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKK 499
             P    DL  +G+ R T++++KL+ +SDSV GQTVVDPKGYLTDL+SM  T   +I D  +
Sbjct:   314 PV--TDLTAVGEGRGTVLSLKLDNLSDSVSGQTVVDPKGYLTDLKSMKRTTDEEIYDRNR 371

Query:   500 ARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQ 559
             ARLL KS+ ++NP +P  WIA+AR+EEV GK++AAR  I +GCEE   +ED+WLEA RL 
Sbjct:   372 ARLLYKSLTQSNPKNPNGWIAAARVEEVDGKIKAARFQIQRGCEECPKNEDVWLEACRLA 431

Query:   560 PVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVEL 619
               + A+ VIA+ V+ IP SV++W++AA LE + + K RV RK LEHIP+SVRLWKA VEL
Sbjct:   432 NPEDAKGVIAKGVKLIPNSVKLWLEAAKLEHDVENKSRVLRKGLEHIPDSVRLWKAVVEL 491

Query:   620 EDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKL 679
              + EDARILL RAVECCP  +ELW+ALARLETY  ++KVLNKARE +P +  IW TAAKL
Sbjct:   492 ANEEDARILLHRAVECCPLHLELWVALARLETYAESKKVLNKAREKLPKEPAIWITAAKL 551

Query:   680 EEAHG-------NNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALI 732
             EEA+G       N AMV KIIDR + +L   GV I+RE+W  EA   E+ GSV TCQA+I
Sbjct:   552 EEANGKLDEANDNTAMVGKIIDRGIKTLQREGVVIDRENWMSEAEACERVGSVATCQAII 611

Query:   733 RAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKN 792
             +  IG GVE+EDRK TW+ DA+ C  +G+ E ARAIYA AL+ F +KKSIWL+AA  EK+
Sbjct:   612 KNTIGIGVEEEDRKRTWVADADECKKRGSIETARAIYAHALSVFLTKKSIWLKAAQLEKS 671

Query:   793 HGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKA 852
             HG+RESL+ LL+KAV + P++EVLWLMGAK      WL         G   +   +LQ+A
Sbjct:   672 HGSRESLDALLRKAVTYVPQAEVLWLMGAKEK----WLA--------GDVPAARAILQEA 719

Query:   853 VAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEX 912
              A  P SE +WL   K ++   +   AR +L+ A +    +E +W+ +  +E E    E 
Sbjct:   720 YAAIPNSEEIWLAAFKLEFENKEPERARMLLAKARERG-GTERVWMKSAIVERELGNVEE 778

Query:   913 XXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAP--TPRVM 970
                               P   ++WL   +LE      E             P   P + 
Sbjct:   779 ERRLLNEGLKQF------PTFFKLWLMLGQLEERFKHLEQARKAYDTGLKHCPHCIP-LW 831

Query:   971 IQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKK 1030
             +  A LE  ++ L +A  +L  A K  P  A+LW+   + E + +   +A    S+A++ 
Sbjct:   832 LSLADLEEKVNGLNKARAILTTARKKNPGGAELWLAAIRAELRHDNKREAEHLMSKALQD 891

Query:  1031 CPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANT 1090
             CP S  LW     +  R +   K+   ++K   R+P+     +A  ++  +    + A  
Sbjct:   892 CPKSGILWAADIEMAPRPRRKTKSIDAMKKCD-RDPHVT---IAVAKLFWQDKKVEKARA 947

Query:  1091 MMAKALQECPNAGILWA 1107
                +A+   P+ G  WA
Sbjct:   948 WFERAVTVGPDIGDFWA 964

 Score = 707 (253.9 bits), Expect = 5.7e-85, Sum P(2) = 5.7e-85
 Identities = 203/638 (31%), Positives = 304/638 (47%)

Query:   497 IKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAA 556
             IK AR  ++   E  P +   W+ + RL       + A+ +I KG +    S  LWLEAA
Sbjct:   403 IKAARFQIQRGCEECPKNEDVWLEACRL----ANPEDAKGVIAKGVKLIPNSVKLWLEAA 458

Query:   557 RLQ-PVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKA 615
             +L+  V+    V+ + + HIP SVR+W    +L  E  A+  ++R A+E  P  + LW A
Sbjct:   459 KLEHDVENKSRVLRKGLEHIPDSVRLWKAVVELANEEDARILLHR-AVECCPLHLELWVA 517

Query:   616 AVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTT 675
                LE   +++ +L++A E  P    +W+  A+LE              N          
Sbjct:   518 LARLETYAESKKVLNKAREKLPKEPAIWITAAKLE------------EAN---------- 555

Query:   676 AAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAI 735
               KL+EA+ N AMV KIIDR + +L   GV I+RE+W  EA   E+ GSV TCQA+I+  
Sbjct:   556 -GKLDEANDNTAMVGKIIDRGIKTLQREGVVIDRENWMSEAEACERVGSVATCQAIIKNT 614

Query:   736 IGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGT 795
             IG GVE+EDRK TW+ DA+ C  +G+ E ARAIYA AL+ F +KKSIWL+AA  EK+HG+
Sbjct:   615 IGIGVEEEDRKRTWVADADECKKRGSIETARAIYAHALSVFLTKKSIWLKAAQLEKSHGS 674

Query:   796 RESLETLLQKAVAHCPKSEVLWLMGAKS----------------------NKKSIWLRAA 833
             RESL+ LL+KAV + P++EVLWLMGAK                       N + IWL A 
Sbjct:   675 RESLDALLRKAVTYVPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAF 734

Query:   834 YFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNS 893
               E  +   E    LL KA      +E +W+  A  +   G+V   R +L+   +  P  
Sbjct:   735 KLEFENKEPERARMLLAKARER-GGTERVWMKSAIVERELGNVEEERRLLNEGLKQFPTF 793

Query:   894 EEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXX 953
              ++WL   +LE      E                   P+   +WL+   LE + N     
Sbjct:   794 FKLWLMLGQLEERFKHLEQARKAYDTGLKHC------PHCIPLWLSLADLEEKVNGLNKA 847

Query:   954 XXXXXXXXXSAPT-PRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEE 1012
                        P    + + + + E   DN   A  L+ +A++  P    LW    ++  
Sbjct:   848 RAILTTARKKNPGGAELWLAAIRAELRHDNKREAEHLMSKALQDCPKSGILWAADIEMAP 907

Query:  1013 QKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELW 1072
             +     K+ D    A+KKC     + I +A L  + K + KAR+  E+     P+  + W
Sbjct:   908 RPRRKTKSID----AMKKCDRDPHVTIAVAKLFWQDKKVEKARAWFERAVTVGPDIGDFW 963

Query:  1073 LAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAI 1110
                 + E++ G  +    ++AK +   P  G  W +AI
Sbjct:   964 ALFYKFELQHGSDEDRKEVVAKCVACEPKHGEKW-QAI 1000

 Score = 609 (219.4 bits), Expect = 2.8e-73, Sum P(2) = 2.8e-73
 Identities = 136/342 (39%), Positives = 190/342 (55%)

Query:   822 KSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARG 881
             + ++K  W+  A   K  G+ E+   +   A++     + +WL  A+ +   G   +   
Sbjct:   621 EEDRKRTWVADADECKKRGSIETARAIYAHALSVFLTKKSIWLKAAQLEKSHGSRESLDA 680

Query:   882 ILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAV 941
             +L  A    P +E +WL   K      E                     PNSEEIWLAA 
Sbjct:   681 LLRKAVTYVPQAEVLWLMGAK------EKWLAGDVPAARAILQEAYAAIPNSEEIWLAAF 734

Query:   942 KLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFA 1001
             KLE EN E E              T RV ++SA +E  L N+E   +LL+E +K FP F 
Sbjct:   735 KLEFENKEPERARMLLAKARERGGTERVWMKSAIVERELGNVEEERRLLNEGLKQFPTFF 794

Query:  1002 KLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKG 1061
             KLW+M GQ+EE+   L++A   +   +K CPH +PLW+ LA+LEE+   L KAR++L   
Sbjct:   795 KLWLMLGQLEERFKHLEQARKAYDTGLKHCPHCIPLWLSLADLEEKVNGLNKARAILTTA 854

Query:  1062 RLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKTK 1121
             R +NP  AELWLAAIR E+R   K  A  +M+KALQ+CP +GILWA  I + PRP+RKTK
Sbjct:   855 RKKNPGGAELWLAAIRAELRHDNKREAEHLMSKALQDCPKSGILWAADIEMAPRPRRKTK 914

Query:  1122 SVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGV 1163
             S+DA+KKC+ DPHV +AV+KLFW + K +K  R+   R + V
Sbjct:   915 SIDAMKKCDRDPHVTIAVAKLFWQDKKVEKA-RAWFERAVTV 955

 Score = 228 (85.3 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
 Identities = 129/578 (22%), Positives = 220/578 (38%)

Query:   495 NDIK-KARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             +D++ K+R+L K + E  P+    W A   L       + AR L+ +  E      +LW+
Sbjct:   462 HDVENKSRVLRKGL-EHIPDSVRLWKAVVEL----ANEEDARILLHRAVECCPLHLELWV 516

Query:   554 EAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLW 613
               ARL+    ++ V+ +A   +P    IWI AA LE E   K     +A ++     ++ 
Sbjct:   517 ALARLETYAESKKVLNKAREKLPKEPAIWITAAKLE-EANGK---LDEANDNTAMVGKII 572

Query:   614 KAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVL-NKARENIPTDRQI 672
                ++    E   +++ R  E   +  E   A  R+ +    + ++ N     +  + + 
Sbjct:   573 DRGIKTLQREG--VVIDR--ENWMSEAE---ACERVGSVATCQAIIKNTIGIGVEEEDRK 625

Query:   673 WTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKA-GSVHTCQAL 731
              T  A  +E     ++      RA+ + + +     +  W K A + EK+ GS  +  AL
Sbjct:   626 RTWVADADECKKRGSIETA---RAIYAHALSVFLTKKSIWLKAA-QLEKSHGSRESLDAL 681

Query:   732 IRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEK 791
             +R  + Y V Q +    W+  A+     G    ARAI  +A A  P+ + IWL A   E 
Sbjct:   682 LRKAVTY-VPQAEV--LWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEF 738

Query:   792 NHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKK----------------------SIW 829
              +   E    LL KA      +E +W+  A   ++                       +W
Sbjct:   739 ENKEPERARMLLAKARER-GGTERVWMKSAIVERELGNVEEERRLLNEGLKQFPTFFKLW 797

Query:   830 LRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQA 889
             L     E+     E         + HCP    LWL  A  +     +  AR IL+ A + 
Sbjct:   798 LMLGQLEERFKHLEQARKAYDTGLKHCPHCIPLWLSLADLEEKVNGLNKARAILTTARKK 857

Query:   890 NPNSEEIWLAAVKLE-SENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENN 948
             NP   E+WLAA++ E   +N+ E                   P S  +W A +++     
Sbjct:   858 NPGGAELWLAAIRAELRHDNKREAEHLMSKALQDC-------PKSGILWAADIEMAPRPR 910

Query:   949 EYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKG 1008
                               P V I  AKL W    +E+A    + A+ V PD    W +  
Sbjct:   911 RKTKSIDAMKKCDRD---PHVTIAVAKLFWQDKKVEKARAWFERAVTVGPDIGDFWALFY 967

Query:  1009 QIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEE 1046
             + E Q    +   +  ++ +   P     W  ++   E
Sbjct:   968 KFELQHGSDEDRKEVVAKCVACEPKHGEKWQAISKAVE 1005

 Score = 212 (79.7 bits), Expect = 5.7e-85, Sum P(2) = 5.7e-85
 Identities = 68/190 (35%), Positives = 85/190 (44%)

Query:    65 FMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRH----AAP-VKR------KK 113
             F+    P  YVAG+GRGATGFTTRSDIGPAR A D+ D       AAP V R      + 
Sbjct:    97 FLNSKPPSNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSALATAAAPGVGRGAGKPSEA 156

Query:   114 KXXXXXXXXXXXXXXXXXXXGYGGS---LFNKDPYDKDDEEADMIYEEIDXXXXXXXXXX 170
             +                    + G+   LF    YD+DD+EAD I+E ID          
Sbjct:   157 EAEDDEEAEEKRYDENQTFDEFEGNDVGLFANAEYDEDDKEADAIWESIDQRMDSRRKDR 216

Query:   171 XXXXXXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQAIPPPPIPLVNRN 230
                             PKI +QF+DLKR L T+S DEW +  ++ G         L N+ 
Sbjct:   217 REAKLKEEIEKYRASNPKITEQFADLKRKLHTLSADEWDSIPEI-GD------YSLRNKK 269

Query:   231 KKHFMGVPAP 240
             KK    VP P
Sbjct:   270 KKFESFVPIP 279

 Score = 136 (52.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
 Identities = 62/291 (21%), Positives = 117/291 (40%)

Query:   982 NLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIML 1041
             ++E A  +   A+ VF     +W+   Q+E+     +       +A+   P +  LW+M 
Sbjct:   640 SIETARAIYAHALSVFLTKKSIWLKAAQLEKSHGSRESLDALLRKAVTYVPQAEVLWLMG 699

Query:  1042 ANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPN 1101
             A  +     +  AR++L++     PN  E+WLAA ++E      + A  ++AKA +E   
Sbjct:   700 AKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFENKEPERARMLLAKA-RERGG 758

Query:  1102 AGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCM 1161
                +W ++  +E    R+  +V+  ++  ++           W     Q   R    + +
Sbjct:   759 TERVWMKSAIVE----RELGNVEEERRLLNEGLKQFPTFFKLWLM-LGQLEERF---KHL 810

Query:  1162 GVKTKSVDA-LKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYK 1220
                 K+ D  LK C H   + L+++ L    N   K R       K +P   + W    +
Sbjct:   811 EQARKAYDTGLKHCPHCIPLWLSLADLEEKVNGLNKARAILTTARKKNPGGAELWLAAIR 870

Query:  1221 FEIINGTEETQAEVKKRCLAAEPKHGENWCRVAKNVSNWKLPRETILSLVA 1271
              E+ +  +     +  + L   PK G  W   A ++     PR    S+ A
Sbjct:   871 AELRHDNKREAEHLMSKALQDCPKSGILW---AADIEMAPRPRRKTKSIDA 918

 Score = 121 (47.7 bits), Expect = 2.2e-75, Sum P(2) = 2.2e-75
 Identities = 29/53 (54%), Positives = 34/53 (64%)

Query:    24 VVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSKHFMGVPAPLGYVA 76
             V GQTVVDPKGYLTDL+SM  T   +I D  +ARLL KS        P G++A
Sbjct:   340 VSGQTVVDPKGYLTDLKSMKRTTDEEIYDRNRARLLYKSLTQSNPKNPNGWIA 392

 Score = 118 (46.6 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
 Identities = 47/195 (24%), Positives = 83/195 (42%)

Query:   967 PRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQ 1026
             P   I +A++E     ++ A   +    +  P    +W+   ++   ++    A    ++
Sbjct:   387 PNGWIAAARVEEVDGKIKAARFQIQRGCEECPKNEDVWLEACRLANPED----AKGVIAK 442

Query:  1027 AIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKD 1086
              +K  P+SV LW+  A LE   +   K+R VL KG    P+   LW A + +   A  +D
Sbjct:   443 GVKLIPNSVKLWLEAAKLEHDVEN--KSR-VLRKGLEHIPDSVRLWKAVVEL---ANEED 496

Query:  1087 IANTMMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCE 1146
              A  ++ +A++ CP    LW     LE   + K     A +K   +P + +  +KL   E
Sbjct:   497 -ARILLHRAVECCPLHLELWVALARLETYAESKKVLNKAREKLPKEPAIWITAAKL---E 552

Query:  1147 NKNQKCHRSGSRRCM 1161
               N K   +     M
Sbjct:   553 EANGKLDEANDNTAM 567

 Score = 83 (34.3 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
 Identities = 38/138 (27%), Positives = 58/138 (42%)

Query:  1047 RRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILW 1106
             R ++L K+   L +   +NPN    W+AA RVE   G    A   + +  +ECP    +W
Sbjct:   371 RARLLYKS---LTQSNPKNPNG---WIAAARVEEVDGKIKAARFQIQRGCEECPKNEDVW 424

Query:  1107 AEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFW-CENKNQKCHRSGSRRCMGVKT 1165
              EA  L      K      +K   +   + L  +KL    ENK++   +        V+ 
Sbjct:   425 LEACRLANPEDAKGVIAKGVKLIPNSVKLWLEAAKLEHDVENKSRVLRKGLEHIPDSVRL 484

Query:  1166 -KSVDALKKCEHDPHVLL 1182
              K+V  L   E D  +LL
Sbjct:   485 WKAVVELAN-EEDARILL 501


>ASPGD|ASPL0000068414 [details] [associations]
            symbol:AN7447 species:162425 "Emericella nidulans"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003674
            "molecular_function" evidence=ND] [GO:0045292 "mRNA cis splicing,
            via spliceosome" evidence=IEA] InterPro:IPR003107
            InterPro:IPR010491 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 Pfam:PF06424 PROSITE:PS50005 PROSITE:PS50293
            SMART:SM00028 SMART:SM00386 GO:GO:0005634 eggNOG:COG0457
            Gene3D:1.25.40.10 EMBL:AACD01000129 EMBL:BN001304 GO:GO:0000398
            HOGENOM:HOG000116247 KO:K12855 OMA:IWLRAAY OrthoDB:EOG4D82F8
            InterPro:IPR027108 PANTHER:PTHR11246:SF1 RefSeq:XP_680716.1
            ProteinModelPortal:Q5AW83 STRING:Q5AW83
            EnsemblFungi:CADANIAT00000537 GeneID:2869476 KEGG:ani:AN7447.2
            Uniprot:Q5AW83
        Length = 941

 Score = 1140 (406.4 bits), Expect = 1.2e-115, P = 1.2e-115
 Identities = 256/612 (41%), Positives = 358/612 (58%)

Query:   308 LFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQFSDLKR 367
             LF    +D++D+EAD IY E+D                          PKIQQQF DLKR
Sbjct:    96 LFAYGQFDQEDDEADRIYREVDEKMDRRRKARREARERQEREEYERKNPKIQQQFVDLKR 155

Query:   368 GLVTVSMDEWKNVPEVGD--ARNRK-QRNPRAE-KFTPLPDSVLRGNLGGESTGAIDPNS 423
              L +VS DEW N+PEVGD   RNR+ ++N R + +F  +PDSVL              + 
Sbjct:   156 SLASVSEDEWANLPEVGDLTGRNRRTKQNLRMQQRFYAVPDSVLASARDSSQFDTTVADD 215

Query:   424 GLMSQIPGTATPGMLTPSGDLDLRKMGQARNTLMNVKLNQIS-----DSVVGQ-TVVDPK 477
             G  +        GM+T     +   +  AR+ ++ VKL+Q +     D+  G  T +DPK
Sbjct:   216 GTATDAGANGADGMIT-----NFANISAARDKVLQVKLDQAAMGSSGDAASGSATSIDPK 270

Query:   478 GYLTDL-QSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARN 536
             GYLT L QS +     ++ D+K+ R+LL+SV  TNP H P WIA ARLEE+ G++  ARN
Sbjct:   271 GYLTSLTQSELKAGEIEVGDVKRVRVLLESVTRTNPKHAPGWIALARLEELAGRIVTARN 330

Query:   537 LIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKR 596
             +I KGCE    SED WLE  RL     A+ + A A+++   S R+WI+A  LETE +AK+
Sbjct:   331 VIAKGCELCPKSEDAWLENIRLNEGHNAKVIAANAIKNNDHSTRLWIEAMRLETEPRAKK 390

Query:   597 RVYRKALEHIPNSVRLWKAAVELE-DPEDARILLSRAVECCPTSVELWLALARLETYENA 655
              V R+A+ HIP SV +WK AV LE DP DAR+LL++AVE  P SVELWLALARLET ENA
Sbjct:   391 NVLRQAILHIPQSVTIWKEAVNLEEDPADARLLLAKAVELIPLSVELWLALARLETPENA 450

Query:   656 RKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKE 715
             +KVLN AR+ +PT  +IW  A++L+E  G    V+ ++ RA+ SL+     + RE W  E
Sbjct:   451 QKVLNAARKAVPTSHEIWIAASRLQEQMGTFNKVN-VMKRAVQSLARENAMLKREEWIAE 509

Query:   716 AIEAEKAGSVHTCQALIRAIIGYGV-EQEDRKHTWMEDAESCANQGAYECARAIYAQALA 774
             A + E+ G+V TC A+IR  +G+G+ E +DRK  WM+DA++  ++G YE ARAIYA AL 
Sbjct:   510 AEKCEEEGAVLTCGAIIRETLGWGLDEDDDRKDIWMDDAKASISRGKYETARAIYAYALR 569

Query:   775 TFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAY 834
              F +++SIW+ AA  E+NHGT+E+L  +L+KAV  CP+SE LWL  AK      W     
Sbjct:   570 VFVNRRSIWVAAADLERNHGTKEALWQVLEKAVEACPQSEELWLQLAKEK----W----- 620

Query:   835 FEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSE 894
                  G  +    +L +A    P +E +WL   K +  A     AR +L+ A +    ++
Sbjct:   621 ---QSGEIDDARRVLGRAFNQNPNNEDIWLAAVKLEADAQQTDQARELLATA-RREAGTD 676

Query:   895 EIWLAAVKLESE 906
              +W+ +V  E +
Sbjct:   677 RVWIKSVAFERQ 688

 Score = 616 (221.9 bits), Expect = 3.4e-76, Sum P(2) = 3.4e-76
 Identities = 180/599 (30%), Positives = 292/599 (48%)

Query:   583 IKAADLETETKAKRRVYRKALEHI-PNSVRLWKAAVELEDPED----ARILLSRAVECCP 637
             +KA ++E     + RV  +++    P     W A   LE+       AR ++++  E CP
Sbjct:   281 LKAGEIEVGDVKRVRVLLESVTRTNPKHAPGWIALARLEELAGRIVTARNVIAKGCELCP 340

Query:   638 TSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLE-EAHGNNAMVDKIIDRA 696
              S + WL   RL    NA+ +   A +N     ++W  A +LE E          ++ +A
Sbjct:   341 KSEDAWLENIRLNEGHNAKVIAANAIKNNDHSTRLWIEAMRLETEPRAKK----NVLRQA 396

Query:   697 LSSLSANGVEINREHWFKEAIEAEK-AGSVHTCQALIRAIIGYGVE---QEDRKHTWMED 752
             +  +  + V I    W KEA+  E+         A    +I   VE      R  T  E+
Sbjct:   397 ILHIPQS-VTI----W-KEAVNLEEDPADARLLLAKAVELIPLSVELWLALARLET-PEN 449

Query:   753 AESCANQG--AYECARAIYAQA------LATFPSKKSIWLRA--------AYFEKNHGTR 796
             A+   N    A   +  I+  A      + TF +K ++  RA        A  ++     
Sbjct:   450 AQKVLNAARKAVPTSHEIWIAASRLQEQMGTF-NKVNVMKRAVQSLARENAMLKREEWIA 508

Query:   797 ESLETLLQKAVAHCPK--SEVL-WLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAV 853
             E+ +   + AV  C     E L W +    ++K IW+  A    + G  E+   +   A+
Sbjct:   509 EAEKCEEEGAVLTCGAIIRETLGWGLDEDDDRKDIWMDDAKASISRGKYETARAIYAYAL 568

Query:   854 AHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXX 913
                     +W+  A  +   G   A   +L  A +A P SEE+WL   K + ++ E +  
Sbjct:   569 RVFVNRRSIWVAAADLERNHGTKEALWQVLEKAVEACPQSEELWLQLAKEKWQSGEIDDA 628

Query:   914 XXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQS 973
                             NPN+E+IWLAAVKLE++  + +            A T RV I+S
Sbjct:   629 RRVLGRAFNQ------NPNNEDIWLAAVKLEADAQQTDQARELLATARREAGTDRVWIKS 682

Query:   974 AKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPH 1033
                E  L N++ AL L+++ ++++P   KLWMMKGQI E +N L +A + +    + CP 
Sbjct:   683 VAFERQLGNVDDALDLVNQGLQLYPKADKLWMMKGQIYESQNKLPQAREAYGTGTRACPK 742

Query:  1034 SVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMA 1093
             SV LW++ + LEE+   +++ARSVL++ RL  PN  ELW  ++RVE RA     A  +MA
Sbjct:   743 SVALWLLASRLEEKAGAVVRARSVLDRARLAVPNSPELWTESVRVERRANNIPQAKVLMA 802

Query:  1094 KALQECPNAGILWAEAIF-LEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQK 1151
             +ALQE P++G+LW+E+I+ LEPR QRK +S++A+KK ++DP + + V+++FW E + +K
Sbjct:   803 RALQEVPSSGLLWSESIWHLEPRSQRKARSLEAIKKVDNDPILFITVARIFWGERRLEK 861

 Score = 537 (194.1 bits), Expect = 5.3e-67, Sum P(2) = 5.3e-67
 Identities = 188/698 (26%), Positives = 303/698 (43%)

Query:   617 VELEDPEDARILLSRAVECCPTSVELWLALARLETYEN----ARKVLNKARENIPTDRQI 672
             +E+ D +  R+LL       P     W+ALARLE        AR V+ K  E  P     
Sbjct:   286 IEVGDVKRVRVLLESVTRTNPKHAPGWIALARLEELAGRIVTARNVIAKGCELCPKSEDA 345

Query:   673 WTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALI 732
             W    +L E H  NA V          ++AN ++ N +H  +  IEA +   + T     
Sbjct:   346 WLENIRLNEGH--NAKV----------IAANAIK-NNDHSTRLWIEAMR---LETEPRAK 389

Query:   733 RAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKN 792
             + ++   +    +  T  ++A +     A   AR + A+A+   P    +WL  A  E  
Sbjct:   390 KNVLRQAILHIPQSVTIWKEAVNLEEDPAD--ARLLLAKAVELIPLSVELWLALARLE-- 445

Query:   793 HGTRESLETLLQKAVAHCPKSEVLWLMGAKS-------NKKSIWLRA--------AYFEK 837
               T E+ + +L  A    P S  +W+  ++        NK ++  RA        A  ++
Sbjct:   446 --TPENAQKVLNAARKAVPTSHEIWIAASRLQEQMGTFNKVNVMKRAVQSLARENAMLKR 503

Query:   838 NHGTRESLETLLQKAVAHCPK--SEVL-------------WLMGAKSKWLAGDVPAARGI 882
                  E+ +   + AV  C     E L             W+  AK+    G    AR I
Sbjct:   504 EEWIAEAEKCEEEGAVLTCGAIIRETLGWGLDEDDDRKDIWMDDAKASISRGKYETARAI 563

Query:   883 LSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVK 942
              + A +   N   IW+AA  LE  +   E                   P SEE+WL   K
Sbjct:   564 YAYALRVFVNRRSIWVAAADLERNHGTKEALWQVLEKAVEAC------PQSEELWLQLAK 617

Query:   943 LESENNEYEXXXXXXXXXXXSAPTPR-VMIQSAKLEWCLDNLERALQLLDEAIKVFPDFA 1001
              + ++ E +             P    + + + KLE      ++A +LL  A +      
Sbjct:   618 EKWQSGEIDDARRVLGRAFNQNPNNEDIWLAAVKLEADAQQTDQARELLATARRE-AGTD 676

Query:  1002 KLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKG 1061
             ++W+     E Q   +D A D  +Q ++  P +  LW+M   + E +  L +AR     G
Sbjct:   677 RVWIKSVAFERQLGNVDDALDLVNQGLQLYPKADKLWMMKGQIYESQNKLPQAREAYGTG 736

Query:  1062 RLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPR----PQ 1117
                 P    LWL A R+E +AG    A +++ +A    PN+  LW E++ +E R    PQ
Sbjct:   737 TRACPKSVALWLLASRLEEKAGAVVRARSVLDRARLAVPNSPELWTESVRVERRANNIPQ 796

Query:  1118 RKTKSVDALKKCEHDPHVLLAVSKLFW-CENKNQKCHRSGSRRCMGVKTKSVDALKKCEH 1176
              K     AL++    P   L  S+  W  E ++Q+            K +S++A+KK ++
Sbjct:   797 AKVLMARALQEV---PSSGLLWSESIWHLEPRSQR------------KARSLEAIKKVDN 841

Query:  1177 DPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKK 1236
             DP + + V+++FW E + +K   WF + +  + D GDAWA++YKF + +GT+E +A+V  
Sbjct:   842 DPILFITVARIFWGERRLEKAMTWFEKAIISNSDFGDAWAWYYKFLLQHGTDEKRADVIS 901

Query:  1237 RCLAAEPKHGENWCRVAKNVSNWKLPRETILSLVAKDL 1274
             +C+ +EPKHGE W  +AKN +N     E IL LVA  L
Sbjct:   902 KCVLSEPKHGEVWQSIAKNPANAYKSTEDILKLVADSL 939

 Score = 227 (85.0 bits), Expect = 3.4e-76, Sum P(2) = 3.4e-76
 Identities = 76/221 (34%), Positives = 95/221 (42%)

Query:    63 KHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKR----------- 111
             K F+  PAP  YVAG+GRGATGFTTRSD+GPAR+     +   AA  KR           
Sbjct:     6 KDFLSQPAPENYVAGLGRGATGFTTRSDLGPAREG-PTPEQIQAALAKRAQLLGAAPPTA 64

Query:   112 ----KKKXXXXXXXXXXXXXXXXXXXGYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXX 167
                 ++K                        LF    +D++D+EAD IY E+D       
Sbjct:    65 YGATREKGKGEEKPAEEEDDERFQDPDNEVGLFAYGQFDQEDDEADRIYREVDEKMDRRR 124

Query:   168 XXXXXXXXXXXXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQAIPPPPIPLV 227
                                PKIQQQF DLKR L +VS DEW N  +V G           
Sbjct:   125 KARREARERQEREEYERKNPKIQQQFVDLKRSLASVSEDEWANLPEV-GDLTGRNRRTKQ 183

Query:   228 N-RNKKHFMGVPAPLGYVAGVGRGATGF-TTRSDIGPARDA 266
             N R ++ F  VP     V    R ++ F TT +D G A DA
Sbjct:   184 NLRMQQRFYAVPDS---VLASARDSSQFDTTVADDGTATDA 221

 Score = 161 (61.7 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
 Identities = 54/200 (27%), Positives = 93/200 (46%)

Query:   493 DINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLW 552
             D     +AR LL + R         WI S   E   G V  A +L+ +G +    ++ LW
Sbjct:   655 DAQQTDQARELLATARR-EAGTDRVWIKSVAFERQLGNVDDALDLVNQGLQLYPKADKLW 713

Query:   553 LEAARL----QPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKA---KRRVYRKALEH 605
             +   ++      +  AR       R  P SV +W+ A+ LE +  A    R V  +A   
Sbjct:   714 MMKGQIYESQNKLPQAREAYGTGTRACPKSVALWLLASRLEEKAGAVVRARSVLDRARLA 773

Query:   606 IPNSVRLWKAAVELE----DPEDARILLSRAVECCPTSVELWL-ALARLETYENARKVLN 660
             +PNS  LW  +V +E    +   A++L++RA++  P+S  LW  ++  LE   + RK  +
Sbjct:   774 VPNSPELWTESVRVERRANNIPQAKVLMARALQEVPSSGLLWSESIWHLEP-RSQRKARS 832

Query:   661 -KARENIPTDRQIWTTAAKL 679
              +A + +  D  ++ T A++
Sbjct:   833 LEAIKKVDNDPILFITVARI 852

 Score = 118 (46.6 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
 Identities = 44/197 (22%), Positives = 88/197 (44%)

Query:   495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
             N + +AR    +     P     W+ ++RLEE  G V  AR+++ +       S +LW E
Sbjct:   724 NKLPQAREAYGTGTRACPKSVALWLLASRLEEKAGAVVRARSVLDRARLAVPNSPELWTE 783

Query:   555 AARLQP----VDTARAVIAQAVRHIPTSVRIWIKAA-DLETETKAKRRVYRKALEHIPNS 609
             + R++     +  A+ ++A+A++ +P+S  +W ++   LE  ++ K R   +A++ + N 
Sbjct:   784 SVRVERRANNIPQAKVLMARALQEVPSSGLLWSESIWHLEPRSQRKARSL-EAIKKVDND 842

Query:   610 VRLWKAAVEL----EDPEDARILLSRAVECCPTSVELWL----ALARLETYENARKVLNK 661
               L+     +       E A     +A+       + W      L +  T E    V++K
Sbjct:   843 PILFITVARIFWGERRLEKAMTWFEKAIISNSDFGDAWAWYYKFLLQHGTDEKRADVISK 902

Query:   662 ARENIPTDRQIWTTAAK 678
                + P   ++W + AK
Sbjct:   903 CVLSEPKHGEVWQSIAK 919

 Score = 109 (43.4 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
 Identities = 41/182 (22%), Positives = 79/182 (43%)

Query:   497 IKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAA 556
             + +AR +L   R   PN P  W  S R+E     +  A+ L+ +  +E  +S  LW E+ 
Sbjct:   760 VVRARSVLDRARLAVPNSPELWTESVRVERRANNIPQAKVLMARALQEVPSSGLLWSESI 819

Query:   557 -RLQPVDTARAVIAQAVRHIPTSVRIWIKAADL---ETETKAKRRVYRKALEHIPNS--- 609
               L+P    +A   +A++ +     ++I  A +   E   +     + KA+  I NS   
Sbjct:   820 WHLEPRSQRKARSLEAIKKVDNDPILFITVARIFWGERRLEKAMTWFEKAI--ISNSDFG 877

Query:   610 -VRLWKAAVELEDPEDARI--LLSRAVECCPTSVELWLALAR--LETYENARKVLNKARE 664
                 W     L+   D +   ++S+ V   P   E+W ++A+     Y++   +L    +
Sbjct:   878 DAWAWYYKFLLQHGTDEKRADVISKCVLSEPKHGEVWQSIAKNPANAYKSTEDILKLVAD 937

Query:   665 NI 666
             ++
Sbjct:   938 SL 939

 Score = 80 (33.2 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query:    28 TVVDPKGYLTDL-QSMIPTYGGDINDIKKARLLLKS 62
             T +DPKGYLT L QS +     ++ D+K+ R+LL+S
Sbjct:   265 TSIDPKGYLTSLTQSELKAGEIEVGDVKRVRVLLES 300


>CGD|CAL0001343 [details] [associations]
            symbol:orf19.6356 species:5476 "Candida albicans" [GO:0003674
            "molecular_function" evidence=ND] [GO:0046540 "U4/U6 x U5 tri-snRNP
            complex" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IEA] InterPro:IPR003107 InterPro:IPR010491
            InterPro:IPR011990 Pfam:PF06424 SMART:SM00386 CGD:CAL0001343
            GO:GO:0005634 eggNOG:COG0457 Gene3D:1.25.40.10 GO:GO:0000398
            EMBL:AACQ01000192 EMBL:AACQ01000189 KO:K12855 InterPro:IPR027108
            PANTHER:PTHR11246:SF1 RefSeq:XP_711574.1 RefSeq:XP_711643.1
            ProteinModelPortal:Q59PD7 STRING:Q59PD7 GeneID:3646751
            GeneID:3646834 KEGG:cal:CaO19.13713 KEGG:cal:CaO19.6356
            Uniprot:Q59PD7
        Length = 911

 Score = 558 (201.5 bits), Expect = 7.0e-74, Sum P(2) = 7.0e-74
 Identities = 152/526 (28%), Positives = 262/526 (49%)

Query:   315 DKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQFSDLKRGLVTVSM 374
             D+DDEEAD IY EI+                               QFSDLKR L  ++ 
Sbjct:    76 DEDDEEADRIYNEIEKKLQSKKRKSPNNKNDRAKPTVTTTNDNSSTQFSDLKRQLANLTE 135

Query:   375 DEWKNVPEVGDA--RNRKQR--NPRAEKFTPLPDSVLRGNLGGESTGAIDPNSGLMSQIP 430
             D+W N+PE GD   +N++ R    + ++    PD+++  +    +TG    N   +S+  
Sbjct:   136 DDWLNLPEPGDMTRKNKRTRLLEQQQQRMYSAPDTLI--STSSSATGTNTTNFKSLSESR 193

Query:   431 GTATPGMLTPSGDLDLRKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTY 490
                    L       ++  GQ+ N   +V   ++  S++  T V+      +LQ      
Sbjct:   194 DKLLGSQLDNLLPAYVKTNGQSINNSSSVS-EELQQSILNMTGVEQDSKYANLQ------ 246

Query:   491 GGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGK-VQAARNLIMKGCEENQTSE 549
                     K R++L S+R++ P  P +WI+SARLEE  GK ++ A+  I++GC++   ++
Sbjct:   247 --------KNRVILSSLRKSEPYKPSSWISSARLEEQDGKNLKLAKQYILEGCKKCPRND 298

Query:   550 DLWLEAARLQPVDT--ARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIP 607
             ++WLE  RL   D    + +I  A+ + P S ++W+KA DLET    KR+V  K LE IP
Sbjct:   299 EIWLENIRLNQSDIKLCKQLITNALNYNPKSEKLWLKATDLETNNINKRKVLMKGLEKIP 358

Query:   608 NSVRLWKAAVELE-DPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENI 666
             N+ +LW+  +ELE DP   + LL +AV+ C  + E W AL  +  YE ++K+LN+AR++I
Sbjct:   359 NNDQLWEKLIELENDPNMVKKLLLKAVQLCSQNWEFWSALLNISNYEESKKILNQARKSI 418

Query:   667 PTDRQI---WTTAAKLEEAHGNNAMVD-----KIIDRALSSLSANGVEINREHWFKEAIE 718
                + I   W TA +LEE       +D     K++D+A+  +S    ++ ++ W+K A +
Sbjct:   419 KGVKNILKVWITACQLEEREYGEETIDINKLIKLMDKAMKEISI--YQMTKDDWYKLACD 476

Query:   719 AEKAGSVHTCQALIRAIIGY-GVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFP 777
             +E+     T +A+I + + + G++Q     +  ED +   N G    A++I    +    
Sbjct:   477 SERENFKVTTKAIIISYLKFKGLDQS----SIFEDVDKFFNDGYIIVAKSILDYIVTNSS 532

Query:   778 SKKSIWLRA-AYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAK 822
             +  + W +  +  +K +     L +   KA++  P+  + +LM AK
Sbjct:   533 NDINKWKKVFSVIKKFNQELPLLFSYYDKAISLNPQVPLFYLMYAK 578

 Score = 281 (104.0 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
 Identities = 123/544 (22%), Positives = 227/544 (41%)

Query:   231 KKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKXXXXXXX 290
             +K F+   AP GYVAG  RGA GF  R+   P     D S +R  A V+ +++       
Sbjct:     3 RKSFLDQEAPEGYVAGSARGAVGF--RTSTSP-----D-SFNRGIAIVQNEEEEEDEDNN 54

Query:   291 XXXXXXXXXXXXGYGGSLFNKD--PYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXX 348
                            G L  K     D+DDEEAD IY EI+                   
Sbjct:    55 NKTTTQLNE-----NGILSTKKRGKEDEDDEEADRIYNEIEKKLQSKKRKSPNNKNDRAK 109

Query:   349 XXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDA--RNRKQR--NPRAEKFTPLPD 404
                         QFSDLKR L  ++ D+W N+PE GD   +N++ R    + ++    PD
Sbjct:   110 PTVTTTNDNSSTQFSDLKRQLANLTEDDWLNLPEPGDMTRKNKRTRLLEQQQQRMYSAPD 169

Query:   405 SVLRGNLGGESTGAIDPNSGLMSQIPGTATPGMLTPSGDLDLRKMGQARNTLMNVKLNQI 464
             +++  +    +TG    N   +S+         L       ++  GQ+ N   +V   ++
Sbjct:   170 TLI--STSSSATGTNTTNFKSLSESRDKLLGSQLDNLLPAYVKTNGQSINNSSSVS-EEL 226

Query:   465 SDSVVGQTVVDPKGYLTDLQ------------------SMIPTYGGDINDIKKARLLLKS 506
               S++  T V+      +LQ                  S I +   +  D K  +L  + 
Sbjct:   227 QQSILNMTGVEQDSKYANLQKNRVILSSLRKSEPYKPSSWISSARLEEQDGKNLKLAKQY 286

Query:   507 VRE---TNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVD- 562
             + E     P +   W+ + RL +    ++  + LI      N  SE LWL+A  L+  + 
Sbjct:   287 ILEGCKKCPRNDEIWLENIRLNQ--SDIKLCKQLITNALNYNPKSEKLWLKATDLETNNI 344

Query:   563 TARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDP 622
               R V+ + +  IP + ++W K  +LE +    +++  KA++    +   W A + + + 
Sbjct:   345 NKRKVLMKGLEKIPNNDQLWEKLIELENDPNMVKKLLLKAVQLCSQNWEFWSALLNISNY 404

Query:   623 EDARILLSRA---VECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKL 679
             E+++ +L++A   ++     +++W+   +LE  E                          
Sbjct:   405 EESKKILNQARKSIKGVKNILKVWITACQLEEREYG------------------------ 440

Query:   680 EEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGY- 738
             EE    N ++ K++D+A+  +S    ++ ++ W+K A ++E+     T +A+I + + + 
Sbjct:   441 EETIDINKLI-KLMDKAMKEISI--YQMTKDDWYKLACDSERENFKVTTKAIIISYLKFK 497

Query:   739 GVEQ 742
             G++Q
Sbjct:   498 GLDQ 501

 Score = 268 (99.4 bits), Expect = 7.0e-74, Sum P(2) = 7.0e-74
 Identities = 62/176 (35%), Positives = 104/176 (59%)

Query:   979 CLDNLERALQ-LLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPL 1037
             CL++    L+ ++ +A+K+FP+  KL++   QI E  + L++A +     +KKCP  + L
Sbjct:   652 CLNSDITVLKDVIQKALKLFPNCWKLYLQNIQILEDIDELEQARENALVGVKKCPQCIYL 711

Query:  1038 WIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAG-LKDIANTMMAKAL 1096
             WI L+ ++E+ +++I+ARS+L++  L+NPN  E+W+  I+ E R G L  + N +  KAL
Sbjct:   712 WIKLSQIDEKAQIIIRARSILDQAILQNPNNPEIWVYKIQFEKRIGNLSSLQN-LTNKAL 770

Query:  1097 QECPNAGILWAEAIFLEPR-PQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQK 1151
             ++ P    LW   + L P+  QRKT  +DALK   +   +LL     FW + K  K
Sbjct:   771 KQFPTDPWLWIINLSLIPKMSQRKTIFLDALKATNNSNLILLISGVFFWFDGKYSK 826

 Score = 176 (67.0 bits), Expect = 3.5e-64, Sum P(2) = 3.5e-64
 Identities = 71/306 (23%), Positives = 128/306 (41%)

Query:   812 KSEVLWLMGAKSNKKSIWLRA-AYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSK 870
             KS + +++   SN  + W +  +  +K +     L +   KA++  P+  + +LM AK K
Sbjct:   521 KSILDYIVTNSSNDINKWKKVFSVIKKFNQELPLLFSYYDKAISLNPQVPLFYLMYAKDK 580

Query:   871 W-LAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXX 929
             W L+ D+P AR IL+    ANP    I  A +KLE                         
Sbjct:   581 WQLSKDIPQARSILNSGELANPTDLSIKFAIIKLELITGNL------LNAEKYIKHIIDT 634

Query:   930 NP-NSEEIWLAAVK-LESENNEYEXXXXXXXXXXXSAPTP-RVMIQSAKLEWCLDNLERA 986
              P  SE+ W   +  L   N++               P   ++ +Q+ ++   +D LE+A
Sbjct:   635 KPMESEKFWYKYIHILRCLNSDITVLKDVIQKALKLFPNCWKLYLQNIQILEDIDELEQA 694

Query:   987 LQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEE 1046
              +     +K  P    LW+   QI+E+  ++ +A     QAI + P++  +W+     E+
Sbjct:   695 RENALVGVKKCPQCIYLWIKLSQIDEKAQIIIRARSILDQAILQNPNNPEIWVYKIQFEK 754

Query:  1047 RRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAG-IL 1105
             R   L   +++  K   + P    LW+  I + +   +     T+   AL+   N+  IL
Sbjct:   755 RIGNLSSLQNLTNKALKQFPTDPWLWI--INLSLIPKMSQ-RKTIFLDALKATNNSNLIL 811

Query:  1106 WAEAIF 1111
                 +F
Sbjct:   812 LISGVF 817

 Score = 137 (53.3 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
 Identities = 59/266 (22%), Positives = 111/266 (41%)

Query:   808 AHCPKSEVLWLMGAKSN--KKSIWLRAAYFEKNHGTRESL-ETLLQKAVAHCPKSEVLWL 864
             A+  K+ V+     KS   K S W+ +A  E+  G    L +  + +    CP+++ +WL
Sbjct:   243 ANLQKNRVILSSLRKSEPYKPSSWISSARLEEQDGKNLKLAKQYILEGCKKCPRNDEIWL 302

Query:   865 MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESEN-NEYEXXXXXXXXXXXX 923
                +      D+   + +++ A   NP SE++WL A  LE+ N N+ +            
Sbjct:   303 ENIRLN--QSDIKLCKQLITNALNYNPKSEKLWLKATDLETNNINKRKVLMKGLEKI--- 357

Query:   924 XXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNL 983
                    PN++++W   ++LE++ N  +                     SA L   + N 
Sbjct:   358 -------PNNDQLWEKLIELENDPNMVKKLLLKAVQLCSQ----NWEFWSALLN--ISNY 404

Query:   984 ERALQLLDEA---IKVFPDFAKLWMMKGQIEEQK--------NLLDKAHDTFSQAIKKCP 1032
             E + ++L++A   IK   +  K+W+   Q+EE++        N L K  D   + I    
Sbjct:   405 EESKKILNQARKSIKGVKNILKVWITACQLEEREYGEETIDINKLIKLMDKAMKEISIYQ 464

Query:  1033 HSVPLWIMLANLEERRKMLIKARSVL 1058
              +   W  LA   ER    +  ++++
Sbjct:   465 MTKDDWYKLACDSERENFKVTTKAII 490

 Score = 126 (49.4 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
 Identities = 54/208 (25%), Positives = 76/208 (36%)

Query:    60 LKSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKXXXXX 119
             ++ K F+   AP GYVAG  RGA GF  R+   P     D S +R  A V+ +++     
Sbjct:     1 MERKSFLDQEAPEGYVAGSARGAVGF--RTSTSP-----D-SFNRGIAIVQNEEEEEDED 52

Query:   120 XXXXXXXXXXXXXXGYGGSLFNKD--PYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXX 177
                              G L  K     D+DDEEAD IY EI+                 
Sbjct:    53 NNNKTTTQLNE-----NGILSTKKRGKEDEDDEEADRIYNEIEKKLQSKKRKSPNNKNDR 107

Query:   178 XXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQAIPPPPIPLVNRNKKHFMGV 237
                           QFSDLKR L  ++ D+W N  +            L+ + ++     
Sbjct:   108 AKPTVTTTNDNSSTQFSDLKRQLANLTEDDWLNLPEPGDMTRKNKRTRLLEQQQQRMYSA 167

Query:   238 PAPLGYVAGVGRGATGFTTRSDIGPARD 265
             P  L   +    G T  T    +  +RD
Sbjct:   168 PDTLISTSSSATG-TNTTNFKSLSESRD 194

 Score = 114 (45.2 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
 Identities = 90/400 (22%), Positives = 159/400 (39%)

Query:   461 LNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKA-RLLLKSVRETNPNHPPA-- 517
             LNQ   S+ G   +  K ++T  Q     YG +  DI K  +L+ K+++E +        
Sbjct:   411 LNQARKSIKGVKNI-LKVWITACQLEEREYGEETIDINKLIKLMDKAMKEISIYQMTKDD 469

Query:   518 WIASARLEE-----VTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAV 572
             W   A   E     VT K      L  KG +++   ED+  +      +  A++++   V
Sbjct:   470 WYKLACDSERENFKVTTKAIIISYLKFKGLDQSSIFEDVD-KFFNDGYIIVAKSILDYIV 528

Query:   573 RHIPTSVRIWIKAADL----ETETKAKRRVYRKALE---HIPNSVRLW-KAAVEL-EDPE 623
              +    +  W K   +      E       Y KA+     +P    ++ K   +L +D  
Sbjct:   529 TNSSNDINKWKKVFSVIKKFNQELPLLFSYYDKAISLNPQVPLFYLMYAKDKWQLSKDIP 588

Query:   624 DARILLSRAVECCPTSVELWLALARLETYE----NARKVLNKARENIPTDRQ-IWTTAAK 678
              AR +L+      PT + +  A+ +LE       NA K +    +  P + +  W     
Sbjct:   589 QARSILNSGELANPTDLSIKFAIIKLELITGNLLNAEKYIKHIIDTKPMESEKFWYKYIH 648

Query:   679 LEEAHGNNAMVDK-IIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIG 737
             +     ++  V K +I +AL  L  N  ++    + +     E    +   QA   A++G
Sbjct:   649 ILRCLNSDITVLKDVIQKALK-LFPNCWKL----YLQNIQILEDIDELE--QARENALVG 701

Query:   738 YGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRE 797
                +     + W++ ++          AR+I  QA+   P+   IW+    FEK  G   
Sbjct:   702 VK-KCPQCIYLWIKLSQIDEKAQIIIRARSILDQAILQNPNNPEIWVYKIQFEKRIGNLS 760

Query:   798 SLETLLQKAVAHCPKSEVLWLMGAK-----SNKKSIWLRA 832
             SL+ L  KA+   P    LW++        S +K+I+L A
Sbjct:   761 SLQNLTNKALKQFPTDPWLWIINLSLIPKMSQRKTIFLDA 800

 Score = 113 (44.8 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
 Identities = 51/249 (20%), Positives = 111/249 (44%)

Query:   858 KSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXX 917
             +  +L + G +      ++   R ILS   ++ P     W+++ +LE ++ +        
Sbjct:   227 QQSILNMTGVEQDSKYANLQKNRVILSSLRKSEPYKPSSWISSARLEEQDGK-----NLK 281

Query:   918 XXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLE 977
                          P ++EIWL  ++L   + +             +  + ++ +++  LE
Sbjct:   282 LAKQYILEGCKKCPRNDEIWLENIRLNQSDIKL-CKQLITNALNYNPKSEKLWLKATDLE 340

Query:   978 WCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPL 1037
                +N+ +  ++L + ++  P+  +LW    ++E   N++ K      +A++ C  +   
Sbjct:   341 --TNNINKR-KVLMKGLEKIPNNDQLWEKLIELENDPNMVKKL---LLKAVQLCSQNWEF 394

Query:  1038 WIMLANL---EERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRA-GLKDI-ANTM- 1091
             W  L N+   EE +K+L +AR  + KG     N  ++W+ A ++E R  G + I  N + 
Sbjct:   395 WSALLNISNYEESKKILNQARKSI-KGV---KNILKVWITACQLEEREYGEETIDINKLI 450

Query:  1092 --MAKALQE 1098
               M KA++E
Sbjct:   451 KLMDKAMKE 459

 Score = 109 (43.4 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
 Identities = 44/164 (26%), Positives = 72/164 (43%)

Query:   967 PRVMIQSAKLEWCLD--NLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTF 1024
             P   I SA+LE   D  NL+ A Q + E  K  P   ++W+   ++ +    L K     
Sbjct:   263 PSSWISSARLEE-QDGKNLKLAKQYILEGCKKCPRNDEIWLENIRLNQSDIKLCK--QLI 319

Query:  1025 SQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGL 1084
             + A+   P S  LW+   +LE      I  R VL KG  + PN  +LW   I +E     
Sbjct:   320 TNALNYNPKSEKLWLKATDLETNN---INKRKVLMKGLEKIPNNDQLWEKLIELE---ND 373

Query:  1085 KDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALKK 1128
              ++   ++ KA+Q C      W+  + +    + K K ++  +K
Sbjct:   374 PNMVKKLLLKAVQLCSQNWEFWSALLNISNYEESK-KILNQARK 416

 Score = 90 (36.7 bits), Expect = 3.9e-55, Sum P(2) = 3.9e-55
 Identities = 33/133 (24%), Positives = 51/133 (38%)

Query:   765 ARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSN 824
             AR+I  QA+   P+   IW+    FEK  G   SL+ L  KA+   P    LW++     
Sbjct:   728 ARSILDQAILQNPNNPEIWVYKIQFEKRIGNLSSLQNLTNKALKQFPTDPWLWIINLSLI 787

Query:   825 KKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILS 884
              K    +  + +    T  S   LL   V         W  G  SK        ++    
Sbjct:   788 PKMSQRKTIFLDALKATNNSNLILLISGV-------FFWFDGKYSK--------SKNWFE 832

Query:   885 LAFQANPNSEEIW 897
              + Q++  + +IW
Sbjct:   833 RSLQSDNTNGDIW 845

 Score = 82 (33.9 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
 Identities = 25/122 (20%), Positives = 61/122 (50%)

Query:   493 DINDIKKARL-LLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDL 551
             DI+++++AR   L  V++  P     WI  ++++E    +  AR+++ +   +N  + ++
Sbjct:   687 DIDELEQARENALVGVKKC-PQCIYLWIKLSQIDEKAQIIIRARSILDQAILQNPNNPEI 745

Query:   552 WLEAA----RLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIP 607
             W+       R+  + + + +  +A++  PT   +WI    L  +   ++ ++  AL+   
Sbjct:   746 WVYKIQFEKRIGNLSSLQNLTNKALKQFPTDPWLWIINLSLIPKMSQRKTIFLDALKATN 805

Query:   608 NS 609
             NS
Sbjct:   806 NS 807

 Score = 52 (23.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
 Identities = 19/92 (20%), Positives = 41/92 (44%)

Query:   461 LNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIA 520
             L  +++  + Q   DP  ++ +L S+IP         ++  + L +++ TN N     + 
Sbjct:   762 LQNLTNKALKQFPTDPWLWIINL-SLIPKMS------QRKTIFLDALKATN-NSNLILLI 813

Query:   521 SARLEEVTGKVQAARNLIMKGCEENQTSEDLW 552
             S       GK   ++N   +  + + T+ D+W
Sbjct:   814 SGVFFWFDGKYSKSKNWFERSLQSDNTNGDIW 845

 Score = 45 (20.9 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
 Identities = 18/82 (21%), Positives = 32/82 (39%)

Query:  1171 LKKCEHDPHVLLAVSKLFWCENKNQ---KCREWFNRTVKIDPDLGDAWAYFYKFEIINGT 1227
             +KKC   P  +    KL   + K Q   + R   ++ +  +P+  + W Y  +FE   G 
Sbjct:   702 VKKC---PQCIYLWIKLSQIDEKAQIIIRARSILDQAILQNPNNPEIWVYKIQFEKRIGN 758

Query:  1228 EETQAEVKKRCLAAEPKHGENW 1249
               +   +  + L   P     W
Sbjct:   759 LSSLQNLTNKALKQFPTDPWLW 780

 Score = 38 (18.4 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query:   760 GAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLL 803
             G Y  ++  + ++L +  +   IW     + K  GT + L + L
Sbjct:   822 GKYSKSKNWFERSLQSDNTNGDIWSWMYNYLKKFGTSKELNSFL 865

 Score = 38 (18.4 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query:   867 AKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNE 909
             A   ++AG   +ARG +      +P+S    +A V+ E E  +
Sbjct:    11 APEGYVAG---SARGAVGFRTSTSPDSFNRGIAIVQNEEEEED 50


>UNIPROTKB|Q59PD7 [details] [associations]
            symbol:PRP6 "Putative uncharacterized protein PRP6"
            species:237561 "Candida albicans SC5314" [GO:0003674
            "molecular_function" evidence=ND] InterPro:IPR003107
            InterPro:IPR010491 InterPro:IPR011990 Pfam:PF06424 SMART:SM00386
            CGD:CAL0001343 GO:GO:0005634 eggNOG:COG0457 Gene3D:1.25.40.10
            GO:GO:0000398 EMBL:AACQ01000192 EMBL:AACQ01000189 KO:K12855
            InterPro:IPR027108 PANTHER:PTHR11246:SF1 RefSeq:XP_711574.1
            RefSeq:XP_711643.1 ProteinModelPortal:Q59PD7 STRING:Q59PD7
            GeneID:3646751 GeneID:3646834 KEGG:cal:CaO19.13713
            KEGG:cal:CaO19.6356 Uniprot:Q59PD7
        Length = 911

 Score = 558 (201.5 bits), Expect = 7.0e-74, Sum P(2) = 7.0e-74
 Identities = 152/526 (28%), Positives = 262/526 (49%)

Query:   315 DKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQFSDLKRGLVTVSM 374
             D+DDEEAD IY EI+                               QFSDLKR L  ++ 
Sbjct:    76 DEDDEEADRIYNEIEKKLQSKKRKSPNNKNDRAKPTVTTTNDNSSTQFSDLKRQLANLTE 135

Query:   375 DEWKNVPEVGDA--RNRKQR--NPRAEKFTPLPDSVLRGNLGGESTGAIDPNSGLMSQIP 430
             D+W N+PE GD   +N++ R    + ++    PD+++  +    +TG    N   +S+  
Sbjct:   136 DDWLNLPEPGDMTRKNKRTRLLEQQQQRMYSAPDTLI--STSSSATGTNTTNFKSLSESR 193

Query:   431 GTATPGMLTPSGDLDLRKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTY 490
                    L       ++  GQ+ N   +V   ++  S++  T V+      +LQ      
Sbjct:   194 DKLLGSQLDNLLPAYVKTNGQSINNSSSVS-EELQQSILNMTGVEQDSKYANLQ------ 246

Query:   491 GGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGK-VQAARNLIMKGCEENQTSE 549
                     K R++L S+R++ P  P +WI+SARLEE  GK ++ A+  I++GC++   ++
Sbjct:   247 --------KNRVILSSLRKSEPYKPSSWISSARLEEQDGKNLKLAKQYILEGCKKCPRND 298

Query:   550 DLWLEAARLQPVDT--ARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIP 607
             ++WLE  RL   D    + +I  A+ + P S ++W+KA DLET    KR+V  K LE IP
Sbjct:   299 EIWLENIRLNQSDIKLCKQLITNALNYNPKSEKLWLKATDLETNNINKRKVLMKGLEKIP 358

Query:   608 NSVRLWKAAVELE-DPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENI 666
             N+ +LW+  +ELE DP   + LL +AV+ C  + E W AL  +  YE ++K+LN+AR++I
Sbjct:   359 NNDQLWEKLIELENDPNMVKKLLLKAVQLCSQNWEFWSALLNISNYEESKKILNQARKSI 418

Query:   667 PTDRQI---WTTAAKLEEAHGNNAMVD-----KIIDRALSSLSANGVEINREHWFKEAIE 718
                + I   W TA +LEE       +D     K++D+A+  +S    ++ ++ W+K A +
Sbjct:   419 KGVKNILKVWITACQLEEREYGEETIDINKLIKLMDKAMKEISI--YQMTKDDWYKLACD 476

Query:   719 AEKAGSVHTCQALIRAIIGY-GVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFP 777
             +E+     T +A+I + + + G++Q     +  ED +   N G    A++I    +    
Sbjct:   477 SERENFKVTTKAIIISYLKFKGLDQS----SIFEDVDKFFNDGYIIVAKSILDYIVTNSS 532

Query:   778 SKKSIWLRA-AYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAK 822
             +  + W +  +  +K +     L +   KA++  P+  + +LM AK
Sbjct:   533 NDINKWKKVFSVIKKFNQELPLLFSYYDKAISLNPQVPLFYLMYAK 578

 Score = 281 (104.0 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
 Identities = 123/544 (22%), Positives = 227/544 (41%)

Query:   231 KKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKXXXXXXX 290
             +K F+   AP GYVAG  RGA GF  R+   P     D S +R  A V+ +++       
Sbjct:     3 RKSFLDQEAPEGYVAGSARGAVGF--RTSTSP-----D-SFNRGIAIVQNEEEEEDEDNN 54

Query:   291 XXXXXXXXXXXXGYGGSLFNKD--PYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXX 348
                            G L  K     D+DDEEAD IY EI+                   
Sbjct:    55 NKTTTQLNE-----NGILSTKKRGKEDEDDEEADRIYNEIEKKLQSKKRKSPNNKNDRAK 109

Query:   349 XXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNVPEVGDA--RNRKQR--NPRAEKFTPLPD 404
                         QFSDLKR L  ++ D+W N+PE GD   +N++ R    + ++    PD
Sbjct:   110 PTVTTTNDNSSTQFSDLKRQLANLTEDDWLNLPEPGDMTRKNKRTRLLEQQQQRMYSAPD 169

Query:   405 SVLRGNLGGESTGAIDPNSGLMSQIPGTATPGMLTPSGDLDLRKMGQARNTLMNVKLNQI 464
             +++  +    +TG    N   +S+         L       ++  GQ+ N   +V   ++
Sbjct:   170 TLI--STSSSATGTNTTNFKSLSESRDKLLGSQLDNLLPAYVKTNGQSINNSSSVS-EEL 226

Query:   465 SDSVVGQTVVDPKGYLTDLQ------------------SMIPTYGGDINDIKKARLLLKS 506
               S++  T V+      +LQ                  S I +   +  D K  +L  + 
Sbjct:   227 QQSILNMTGVEQDSKYANLQKNRVILSSLRKSEPYKPSSWISSARLEEQDGKNLKLAKQY 286

Query:   507 VRE---TNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVD- 562
             + E     P +   W+ + RL +    ++  + LI      N  SE LWL+A  L+  + 
Sbjct:   287 ILEGCKKCPRNDEIWLENIRLNQ--SDIKLCKQLITNALNYNPKSEKLWLKATDLETNNI 344

Query:   563 TARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDP 622
               R V+ + +  IP + ++W K  +LE +    +++  KA++    +   W A + + + 
Sbjct:   345 NKRKVLMKGLEKIPNNDQLWEKLIELENDPNMVKKLLLKAVQLCSQNWEFWSALLNISNY 404

Query:   623 EDARILLSRA---VECCPTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKL 679
             E+++ +L++A   ++     +++W+   +LE  E                          
Sbjct:   405 EESKKILNQARKSIKGVKNILKVWITACQLEEREYG------------------------ 440

Query:   680 EEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGY- 738
             EE    N ++ K++D+A+  +S    ++ ++ W+K A ++E+     T +A+I + + + 
Sbjct:   441 EETIDINKLI-KLMDKAMKEISI--YQMTKDDWYKLACDSERENFKVTTKAIIISYLKFK 497

Query:   739 GVEQ 742
             G++Q
Sbjct:   498 GLDQ 501

 Score = 268 (99.4 bits), Expect = 7.0e-74, Sum P(2) = 7.0e-74
 Identities = 62/176 (35%), Positives = 104/176 (59%)

Query:   979 CLDNLERALQ-LLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPL 1037
             CL++    L+ ++ +A+K+FP+  KL++   QI E  + L++A +     +KKCP  + L
Sbjct:   652 CLNSDITVLKDVIQKALKLFPNCWKLYLQNIQILEDIDELEQARENALVGVKKCPQCIYL 711

Query:  1038 WIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAG-LKDIANTMMAKAL 1096
             WI L+ ++E+ +++I+ARS+L++  L+NPN  E+W+  I+ E R G L  + N +  KAL
Sbjct:   712 WIKLSQIDEKAQIIIRARSILDQAILQNPNNPEIWVYKIQFEKRIGNLSSLQN-LTNKAL 770

Query:  1097 QECPNAGILWAEAIFLEPR-PQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQK 1151
             ++ P    LW   + L P+  QRKT  +DALK   +   +LL     FW + K  K
Sbjct:   771 KQFPTDPWLWIINLSLIPKMSQRKTIFLDALKATNNSNLILLISGVFFWFDGKYSK 826

 Score = 176 (67.0 bits), Expect = 3.5e-64, Sum P(2) = 3.5e-64
 Identities = 71/306 (23%), Positives = 128/306 (41%)

Query:   812 KSEVLWLMGAKSNKKSIWLRA-AYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSK 870
             KS + +++   SN  + W +  +  +K +     L +   KA++  P+  + +LM AK K
Sbjct:   521 KSILDYIVTNSSNDINKWKKVFSVIKKFNQELPLLFSYYDKAISLNPQVPLFYLMYAKDK 580

Query:   871 W-LAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXX 929
             W L+ D+P AR IL+    ANP    I  A +KLE                         
Sbjct:   581 WQLSKDIPQARSILNSGELANPTDLSIKFAIIKLELITGNL------LNAEKYIKHIIDT 634

Query:   930 NP-NSEEIWLAAVK-LESENNEYEXXXXXXXXXXXSAPTP-RVMIQSAKLEWCLDNLERA 986
              P  SE+ W   +  L   N++               P   ++ +Q+ ++   +D LE+A
Sbjct:   635 KPMESEKFWYKYIHILRCLNSDITVLKDVIQKALKLFPNCWKLYLQNIQILEDIDELEQA 694

Query:   987 LQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEE 1046
              +     +K  P    LW+   QI+E+  ++ +A     QAI + P++  +W+     E+
Sbjct:   695 RENALVGVKKCPQCIYLWIKLSQIDEKAQIIIRARSILDQAILQNPNNPEIWVYKIQFEK 754

Query:  1047 RRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAG-IL 1105
             R   L   +++  K   + P    LW+  I + +   +     T+   AL+   N+  IL
Sbjct:   755 RIGNLSSLQNLTNKALKQFPTDPWLWI--INLSLIPKMSQ-RKTIFLDALKATNNSNLIL 811

Query:  1106 WAEAIF 1111
                 +F
Sbjct:   812 LISGVF 817

 Score = 137 (53.3 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
 Identities = 59/266 (22%), Positives = 111/266 (41%)

Query:   808 AHCPKSEVLWLMGAKSN--KKSIWLRAAYFEKNHGTRESL-ETLLQKAVAHCPKSEVLWL 864
             A+  K+ V+     KS   K S W+ +A  E+  G    L +  + +    CP+++ +WL
Sbjct:   243 ANLQKNRVILSSLRKSEPYKPSSWISSARLEEQDGKNLKLAKQYILEGCKKCPRNDEIWL 302

Query:   865 MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESEN-NEYEXXXXXXXXXXXX 923
                +      D+   + +++ A   NP SE++WL A  LE+ N N+ +            
Sbjct:   303 ENIRLN--QSDIKLCKQLITNALNYNPKSEKLWLKATDLETNNINKRKVLMKGLEKI--- 357

Query:   924 XXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNL 983
                    PN++++W   ++LE++ N  +                     SA L   + N 
Sbjct:   358 -------PNNDQLWEKLIELENDPNMVKKLLLKAVQLCSQ----NWEFWSALLN--ISNY 404

Query:   984 ERALQLLDEA---IKVFPDFAKLWMMKGQIEEQK--------NLLDKAHDTFSQAIKKCP 1032
             E + ++L++A   IK   +  K+W+   Q+EE++        N L K  D   + I    
Sbjct:   405 EESKKILNQARKSIKGVKNILKVWITACQLEEREYGEETIDINKLIKLMDKAMKEISIYQ 464

Query:  1033 HSVPLWIMLANLEERRKMLIKARSVL 1058
              +   W  LA   ER    +  ++++
Sbjct:   465 MTKDDWYKLACDSERENFKVTTKAII 490

 Score = 126 (49.4 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
 Identities = 54/208 (25%), Positives = 76/208 (36%)

Query:    60 LKSKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAAPVKRKKKXXXXX 119
             ++ K F+   AP GYVAG  RGA GF  R+   P     D S +R  A V+ +++     
Sbjct:     1 MERKSFLDQEAPEGYVAGSARGAVGF--RTSTSP-----D-SFNRGIAIVQNEEEEEDED 52

Query:   120 XXXXXXXXXXXXXXGYGGSLFNKD--PYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXX 177
                              G L  K     D+DDEEAD IY EI+                 
Sbjct:    53 NNNKTTTQLNE-----NGILSTKKRGKEDEDDEEADRIYNEIEKKLQSKKRKSPNNKNDR 107

Query:   178 XXXXXXXXXPKIQQQFSDLKRGLVTVSMDEWKNEGQVVGQAIPPPPIPLVNRNKKHFMGV 237
                           QFSDLKR L  ++ D+W N  +            L+ + ++     
Sbjct:   108 AKPTVTTTNDNSSTQFSDLKRQLANLTEDDWLNLPEPGDMTRKNKRTRLLEQQQQRMYSA 167

Query:   238 PAPLGYVAGVGRGATGFTTRSDIGPARD 265
             P  L   +    G T  T    +  +RD
Sbjct:   168 PDTLISTSSSATG-TNTTNFKSLSESRD 194

 Score = 114 (45.2 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
 Identities = 90/400 (22%), Positives = 159/400 (39%)

Query:   461 LNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKA-RLLLKSVRETNPNHPPA-- 517
             LNQ   S+ G   +  K ++T  Q     YG +  DI K  +L+ K+++E +        
Sbjct:   411 LNQARKSIKGVKNI-LKVWITACQLEEREYGEETIDINKLIKLMDKAMKEISIYQMTKDD 469

Query:   518 WIASARLEE-----VTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPVDTARAVIAQAV 572
             W   A   E     VT K      L  KG +++   ED+  +      +  A++++   V
Sbjct:   470 WYKLACDSERENFKVTTKAIIISYLKFKGLDQSSIFEDVD-KFFNDGYIIVAKSILDYIV 528

Query:   573 RHIPTSVRIWIKAADL----ETETKAKRRVYRKALE---HIPNSVRLW-KAAVEL-EDPE 623
              +    +  W K   +      E       Y KA+     +P    ++ K   +L +D  
Sbjct:   529 TNSSNDINKWKKVFSVIKKFNQELPLLFSYYDKAISLNPQVPLFYLMYAKDKWQLSKDIP 588

Query:   624 DARILLSRAVECCPTSVELWLALARLETYE----NARKVLNKARENIPTDRQ-IWTTAAK 678
              AR +L+      PT + +  A+ +LE       NA K +    +  P + +  W     
Sbjct:   589 QARSILNSGELANPTDLSIKFAIIKLELITGNLLNAEKYIKHIIDTKPMESEKFWYKYIH 648

Query:   679 LEEAHGNNAMVDK-IIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIG 737
             +     ++  V K +I +AL  L  N  ++    + +     E    +   QA   A++G
Sbjct:   649 ILRCLNSDITVLKDVIQKALK-LFPNCWKL----YLQNIQILEDIDELE--QARENALVG 701

Query:   738 YGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRE 797
                +     + W++ ++          AR+I  QA+   P+   IW+    FEK  G   
Sbjct:   702 VK-KCPQCIYLWIKLSQIDEKAQIIIRARSILDQAILQNPNNPEIWVYKIQFEKRIGNLS 760

Query:   798 SLETLLQKAVAHCPKSEVLWLMGAK-----SNKKSIWLRA 832
             SL+ L  KA+   P    LW++        S +K+I+L A
Sbjct:   761 SLQNLTNKALKQFPTDPWLWIINLSLIPKMSQRKTIFLDA 800

 Score = 113 (44.8 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
 Identities = 51/249 (20%), Positives = 111/249 (44%)

Query:   858 KSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXX 917
             +  +L + G +      ++   R ILS   ++ P     W+++ +LE ++ +        
Sbjct:   227 QQSILNMTGVEQDSKYANLQKNRVILSSLRKSEPYKPSSWISSARLEEQDGK-----NLK 281

Query:   918 XXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLE 977
                          P ++EIWL  ++L   + +             +  + ++ +++  LE
Sbjct:   282 LAKQYILEGCKKCPRNDEIWLENIRLNQSDIKL-CKQLITNALNYNPKSEKLWLKATDLE 340

Query:   978 WCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPL 1037
                +N+ +  ++L + ++  P+  +LW    ++E   N++ K      +A++ C  +   
Sbjct:   341 --TNNINKR-KVLMKGLEKIPNNDQLWEKLIELENDPNMVKKL---LLKAVQLCSQNWEF 394

Query:  1038 WIMLANL---EERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRA-GLKDI-ANTM- 1091
             W  L N+   EE +K+L +AR  + KG     N  ++W+ A ++E R  G + I  N + 
Sbjct:   395 WSALLNISNYEESKKILNQARKSI-KGV---KNILKVWITACQLEEREYGEETIDINKLI 450

Query:  1092 --MAKALQE 1098
               M KA++E
Sbjct:   451 KLMDKAMKE 459

 Score = 109 (43.4 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
 Identities = 44/164 (26%), Positives = 72/164 (43%)

Query:   967 PRVMIQSAKLEWCLD--NLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTF 1024
             P   I SA+LE   D  NL+ A Q + E  K  P   ++W+   ++ +    L K     
Sbjct:   263 PSSWISSARLEE-QDGKNLKLAKQYILEGCKKCPRNDEIWLENIRLNQSDIKLCK--QLI 319

Query:  1025 SQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGL 1084
             + A+   P S  LW+   +LE      I  R VL KG  + PN  +LW   I +E     
Sbjct:   320 TNALNYNPKSEKLWLKATDLETNN---INKRKVLMKGLEKIPNNDQLWEKLIELE---ND 373

Query:  1085 KDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALKK 1128
              ++   ++ KA+Q C      W+  + +    + K K ++  +K
Sbjct:   374 PNMVKKLLLKAVQLCSQNWEFWSALLNISNYEESK-KILNQARK 416

 Score = 90 (36.7 bits), Expect = 3.9e-55, Sum P(2) = 3.9e-55
 Identities = 33/133 (24%), Positives = 51/133 (38%)

Query:   765 ARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSN 824
             AR+I  QA+   P+   IW+    FEK  G   SL+ L  KA+   P    LW++     
Sbjct:   728 ARSILDQAILQNPNNPEIWVYKIQFEKRIGNLSSLQNLTNKALKQFPTDPWLWIINLSLI 787

Query:   825 KKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILS 884
              K    +  + +    T  S   LL   V         W  G  SK        ++    
Sbjct:   788 PKMSQRKTIFLDALKATNNSNLILLISGV-------FFWFDGKYSK--------SKNWFE 832

Query:   885 LAFQANPNSEEIW 897
              + Q++  + +IW
Sbjct:   833 RSLQSDNTNGDIW 845

 Score = 82 (33.9 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
 Identities = 25/122 (20%), Positives = 61/122 (50%)

Query:   493 DINDIKKARL-LLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDL 551
             DI+++++AR   L  V++  P     WI  ++++E    +  AR+++ +   +N  + ++
Sbjct:   687 DIDELEQARENALVGVKKC-PQCIYLWIKLSQIDEKAQIIIRARSILDQAILQNPNNPEI 745

Query:   552 WLEAA----RLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIP 607
             W+       R+  + + + +  +A++  PT   +WI    L  +   ++ ++  AL+   
Sbjct:   746 WVYKIQFEKRIGNLSSLQNLTNKALKQFPTDPWLWIINLSLIPKMSQRKTIFLDALKATN 805

Query:   608 NS 609
             NS
Sbjct:   806 NS 807

 Score = 52 (23.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
 Identities = 19/92 (20%), Positives = 41/92 (44%)

Query:   461 LNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIA 520
             L  +++  + Q   DP  ++ +L S+IP         ++  + L +++ TN N     + 
Sbjct:   762 LQNLTNKALKQFPTDPWLWIINL-SLIPKMS------QRKTIFLDALKATN-NSNLILLI 813

Query:   521 SARLEEVTGKVQAARNLIMKGCEENQTSEDLW 552
             S       GK   ++N   +  + + T+ D+W
Sbjct:   814 SGVFFWFDGKYSKSKNWFERSLQSDNTNGDIW 845

 Score = 45 (20.9 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
 Identities = 18/82 (21%), Positives = 32/82 (39%)

Query:  1171 LKKCEHDPHVLLAVSKLFWCENKNQ---KCREWFNRTVKIDPDLGDAWAYFYKFEIINGT 1227
             +KKC   P  +    KL   + K Q   + R   ++ +  +P+  + W Y  +FE   G 
Sbjct:   702 VKKC---PQCIYLWIKLSQIDEKAQIIIRARSILDQAILQNPNNPEIWVYKIQFEKRIGN 758

Query:  1228 EETQAEVKKRCLAAEPKHGENW 1249
               +   +  + L   P     W
Sbjct:   759 LSSLQNLTNKALKQFPTDPWLW 780

 Score = 38 (18.4 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query:   760 GAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLL 803
             G Y  ++  + ++L +  +   IW     + K  GT + L + L
Sbjct:   822 GKYSKSKNWFERSLQSDNTNGDIWSWMYNYLKKFGTSKELNSFL 865

 Score = 38 (18.4 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query:   867 AKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNE 909
             A   ++AG   +ARG +      +P+S    +A V+ E E  +
Sbjct:    11 APEGYVAG---SARGAVGFRTSTSPDSFNRGIAIVQNEEEEED 50


>SGD|S000000259 [details] [associations]
            symbol:PRP6 "Splicing factor" species:4932 "Saccharomyces
            cerevisiae" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IPI]
            [GO:0046540 "U4/U6 x U5 tri-snRNP complex" evidence=IDA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0003674 "molecular_function"
            evidence=ND] InterPro:IPR003107 InterPro:IPR010491
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            Pfam:PF06424 SMART:SM00028 SMART:SM00386 SGD:S000000259
            EMBL:BK006936 eggNOG:COG0457 Gene3D:1.25.40.10 GO:GO:0000398
            GO:GO:0046540 EMBL:Z46260 KO:K12855 OrthoDB:EOG4D82F8
            InterPro:IPR027108 PANTHER:PTHR11246:SF1
            GeneTree:ENSGT00550000075016 EMBL:X53465 EMBL:Z35924 PIR:S12319
            RefSeq:NP_009611.1 ProteinModelPortal:P19735 SMR:P19735
            DIP:DIP-1290N IntAct:P19735 MINT:MINT-392841 STRING:P19735
            PaxDb:P19735 PeptideAtlas:P19735 EnsemblFungi:YBR055C GeneID:852344
            KEGG:sce:YBR055C CYGD:YBR055c HOGENOM:HOG000246836 OMA:PQGWIAS
            NextBio:971082 Genevestigator:P19735 GermOnline:YBR055C
            Uniprot:P19735
        Length = 899

 Score = 511 (184.9 bits), Expect = 8.7e-70, Sum P(4) = 8.7e-70
 Identities = 150/514 (29%), Positives = 240/514 (46%)

Query:   358 IQQQFSDLKRGLVTVSMDEWKNVPEVGDARNRKQRNPRAEKFTPLPDSVLRGNLGGESTG 417
             +++QF+DLK  L  V+  EW ++P+  D   R +RN   E+            L  ++  
Sbjct:   100 VKRQFADLKESLAAVTESEWMDIPDATDFTRRNKRNRIQEQ------------LNRKTYA 147

Query:   418 AIDPNSGLMSQIPGTATPGMLTPSGDLDLRKMGQARNTLMNVKLNQISDSVVGQ--TVVD 475
             A D      S IPG      LT   +  L+   Q    L  +  N  +   V +     D
Sbjct:   148 APD------SLIPGNVDLNKLTEEREKLLQS--QIDENLAQLTKNASNPIQVNKPNAATD 199

Query:   476 PKGYLTDLQSMIPTYGGD--INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQA 533
                YL DL++       D  + D++K R +LKS R+ +P +P  WIASARLEE   K   
Sbjct:   200 ALSYLKDLENDRVNSLSDATLEDLQKMRTILKSYRKADPTNPQGWIASARLEEKARKFSV 259

Query:   534 ARNLIMKGCEENQTSEDLWLEAARLQPVDT--ARAVIAQAVRHIPTSVRIWIKAADLETE 591
             A+ +I  GC+E   S D+WLE  RL   D    + ++A A+   PTS  +W KA DLE+ 
Sbjct:   260 AKKIIENGCQECPRSSDIWLENIRLHESDVHYCKTLVATAINFNPTSPLLWFKAIDLEST 319

Query:   592 TKAKRRVYRKALEHIPNSVRLWKAAVELE-DPEDARILLSRAVECCPTSVELWLALARLE 650
             T  K RV RKAL+ IP    LWK AV  E D      +L +A +  P S++L  A   L+
Sbjct:   320 TVNKYRVVRKALQEIPRDEGLWKLAVSFEADKAQVIKMLEKATQFIPQSMDLLTAYTNLQ 379

Query:   651 TYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIID---RALSSLSANGVEI 707
             +Y NA+  LN  R+ +P + +IW  +  LEE +  +  VDK++      L  LS NG + 
Sbjct:   380 SYHNAKMTLNSFRKILPQEPEIWIISTLLEERNNPDIPVDKLVSLLKEGLLELSKNGYKA 439

Query:   708 NREHWFKEAIEAEKAGSVH-TCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECAR 766
                 W K A     A + + TCQA++ AI+ + + +     + + + +    +  +   +
Sbjct:   440 TLSAWLKRAEALNDAPNSNLTCQAIVYAILEW-LRESGEYESELNNVDQILEKMPHSKVQ 498

Query:   767 -AIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWL-MGAKSN 824
              A+  + +   P    +W R     +++   E L    Q+ +     S+ +   M  KS 
Sbjct:   499 IAVLKKLIQWDPCDTVLWSRLKMATESYHKIEELLAFFQELLFQTKNSDDIRANMREKSP 558

Query:   825 KKSIWLRAAYFEKNHG-TRESLETLLQKAVAHCP 857
                +   + Y++   G TR++L  L+ + +   P
Sbjct:   559 GLLMMYVSEYWKAQKGDTRQTL-VLIDQIIDFAP 591

 Score = 229 (85.7 bits), Expect = 8.7e-70, Sum P(4) = 8.7e-70
 Identities = 54/169 (31%), Positives = 95/169 (56%)

Query:   984 ERALQLLDE-AIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLA 1042
             E A++ L+E  +K FP   K ++  GQI      ++ + +T+    +  P+   LW+ L+
Sbjct:   650 EEAIKFLNERCLKSFPICHKFFLQLGQIYHSMGNIEMSRETYLSGTRLVPNCPLLWVSLS 709

Query:  1043 NLEE-RRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPN 1101
              ++E   K  ++ARS+L++G L+NP+    ++A I++EIR G  D A  ++ +ALQ+ P+
Sbjct:   710 KIDEIDLKNPVRARSILDRGLLKNPDDVLFYIAKIQMEIRLGNLDQAELLVTQALQKFPS 769

Query:  1102 AGILWAEAIFL----EPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCE 1146
               +LW E I L         +KT   DAL++ ++D  VLL +   F+ E
Sbjct:   770 NALLWVEQIKLFKHGNKSSLKKTIFQDALRRTQNDHRVLLEIGVSFYAE 818

 Score = 192 (72.6 bits), Expect = 7.9e-15, Sum P(3) = 7.9e-15
 Identities = 151/729 (20%), Positives = 282/729 (38%)

Query:   433 ATPGMLTPSGDLDLRKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGG 492
             A P  L P G++DL K+ + R  L+    +QI +++   T    K     +Q   P    
Sbjct:   147 AAPDSLIP-GNVDLNKLTEEREKLLQ---SQIDENLAQLT----KNASNPIQVNKPNAAT 198

Query:   493 DINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLW 552
             D      A   LK +     N     ++ A LE++    Q  R ++    + + T+   W
Sbjct:   199 D------ALSYLKDLENDRVNS----LSDATLEDL----QKMRTILKSYRKADPTNPQGW 244

Query:   553 LEAARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADL-ETETKAKRRVYRKALEHIP 607
             + +ARL+        A+ +I    +  P S  IW++   L E++    + +   A+   P
Sbjct:   245 IASARLEEKARKFSVAKKIIENGCQECPRSSDIWLENIRLHESDVHYCKTLVATAINFNP 304

Query:   608 NSVRLWKAAVELEDPEDARI-LLSRAVECCPTSVELWLALARLETYENAR--KVLNKARE 664
              S  LW  A++LE     +  ++ +A++  P    LW      E  + A+  K+L KA +
Sbjct:   305 TSPLLWFKAIDLESTTVNKYRVVRKALQEIPRDEGLWKLAVSFEA-DKAQVIKMLEKATQ 363

Query:   665 NIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGS 724
              IP    + T    L+  H  NA   K+   +   +     EI    W    +  E+   
Sbjct:   364 FIPQSMDLLTAYTNLQSYH--NA---KMTLNSFRKILPQEPEI----WIISTLLEERNNP 414

Query:   725 VHTCQALIRAIIGYGVEQEDR---KHT---WMEDAESC--ANQGAYECARAIYA--QALA 774
                   L+ +++  G+ +  +   K T   W++ AE+   A      C   +YA  + L 
Sbjct:   415 DIPVDKLV-SLLKEGLLELSKNGYKATLSAWLKRAEALNDAPNSNLTCQAIVYAILEWLR 473

Query:   775 TFPSKKSIWLRA-AYFEKNHGTRESLETLLQKAVAHCPKSEVLWL---MGAKSNKKSIWL 830
                  +S         EK   ++  +  +L+K +   P   VLW    M  +S  K   L
Sbjct:   474 ESGEYESELNNVDQILEKMPHSKVQI-AVLKKLIQWDPCDTVLWSRLKMATESYHKIEEL 532

Query:   831 RAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLA--GDVPAARGILSLAFQ 888
              A + E    T+ S +           KS  L +M     W A  GD      ++     
Sbjct:   533 LAFFQELLFQTKNSDDIRANMR----EKSPGLLMMYVSEYWKAQKGDTRQTLVLIDQIID 588

Query:   889 ANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVK-LESEN 947
               P++ ++    +KL   + + +                  +  +E ++   V  L  ++
Sbjct:   589 FAPHNLDLRFFKIKLLGRSLQLDELRDFFQQTFSSLEDFKIS-GTERLYYKYVNFLRYQD 647

Query:   948 NEYEXXXXXXXXXXXSAPT-PRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMM 1006
                E           S P   +  +Q  ++   + N+E + +      ++ P+   LW+ 
Sbjct:   648 LNEEAIKFLNERCLKSFPICHKFFLQLGQIYHSMGNIEMSRETYLSGTRLVPNCPLLWVS 707

Query:  1007 KGQIEE--QKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLR 1064
               +I+E   KN + +A     + + K P  V  +I    +E R   L +A  ++ +   +
Sbjct:   708 LSKIDEIDLKNPV-RARSILDRGLLKNPDDVLFYIAKIQMEIRLGNLDQAELLVTQALQK 766

Query:  1065 NPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAE---AIFLEPRPQRKTK 1121
              P+ A LW+  I++        +  T+   AL+   N   +  E   + + E + +   K
Sbjct:   767 FPSNALLWVEQIKLFKHGNKSSLKKTIFQDALRRTQNDHRVLLEIGVSFYAEAQYETSLK 826

Query:  1122 SVD-ALKKC 1129
              ++ ALKKC
Sbjct:   827 WLERALKKC 835

 Score = 114 (45.2 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
 Identities = 36/121 (29%), Positives = 61/121 (50%)

Query:  1023 TFSQAIKKCPHSVPL-WIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIR 1081
             T  ++ +K   + P  WI  A LEE+ +    A+ ++E G    P  +++WL  IR+   
Sbjct:   228 TILKSYRKADPTNPQGWIASARLEEKARKFSVAKKIIENGCQECPRSSDIWLENIRLH-E 286

Query:  1082 AGLKDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKTKSV-DALKKCEHDPHVL-LAV 1139
             + +     T++A A+   P + +LW +AI LE     K + V  AL++   D  +  LAV
Sbjct:   287 SDVH-YCKTLVATAINFNPTSPLLWFKAIDLESTTVNKYRVVRKALQEIPRDEGLWKLAV 345

Query:  1140 S 1140
             S
Sbjct:   346 S 346

 Score = 101 (40.6 bits), Expect = 1.8e-56, Sum P(4) = 1.8e-56
 Identities = 37/143 (25%), Positives = 67/143 (46%)

Query:   967 PRVMIQSAKL-EWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFS 1025
             P + +  +K+ E  L N  RA  +LD  +   PD    ++ K Q+E +   LD+A    +
Sbjct:   702 PLLWVSLSKIDEIDLKNPVRARSILDRGLLKNPDDVLFYIAKIQMEIRLGNLDQAELLVT 761

Query:  1026 QAIKKCPHSVPLWIMLANL-EERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGL 1084
             QA++K P +  LW+    L +   K  +K +++ +    R  N   + L  I V   A  
Sbjct:   762 QALQKFPSNALLWVEQIKLFKHGNKSSLK-KTIFQDALRRTQNDHRV-LLEIGVSFYAEA 819

Query:  1085 K-DIANTMMAKALQECPNAGILW 1106
             + + +   + +AL++C   G  W
Sbjct:   820 QYETSLKWLERALKKCSRYGDTW 842

 Score = 95 (38.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
 Identities = 34/153 (22%), Positives = 65/153 (42%)

Query:   596 RRVYRKALEHIPNSVRLWKAA-----VELEDPEDARILLSRAVECCPTSVELWLALARLE 650
             R  Y      +PN   LW +      ++L++P  AR +L R +   P  V  ++A  ++E
Sbjct:   688 RETYLSGTRLVPNCPLLWVSLSKIDEIDLKNPVRARSILDRGLLKNPDDVLFYIAKIQME 747

Query:   651 ----TYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVE 706
                   + A  ++ +A +  P++  +W    KL + HGN + + K I +     + N   
Sbjct:   748 IRLGNLDQAELLVTQALQKFPSNALLWVEQIKLFK-HGNKSSLKKTIFQDALRRTQNDHR 806

Query:   707 INREHWFKEAIEAEKAGSVHTCQALIRAIIGYG 739
             +  E       EA+   S+   +  ++    YG
Sbjct:   807 VLLEIGVSFYAEAQYETSLKWLERALKKCSRYG 839

 Score = 80 (33.2 bits), Expect = 8.7e-70, Sum P(4) = 8.7e-70
 Identities = 14/24 (58%), Positives = 18/24 (75%)

Query:    65 FMGVPAPLGYVAGVGRGATGFTTR 88
             F+    P GYV G+GRGATGF+T+
Sbjct:     6 FLDQEPPAGYVPGIGRGATGFSTK 29

 Score = 80 (33.2 bits), Expect = 4.0e-68, Sum P(3) = 4.0e-68
 Identities = 14/24 (58%), Positives = 18/24 (75%)

Query:   234 FMGVPAPLGYVAGVGRGATGFTTR 257
             F+    P GYV G+GRGATGF+T+
Sbjct:     6 FLDQEPPAGYVPGIGRGATGFSTK 29

 Score = 57 (25.1 bits), Expect = 8.7e-70, Sum P(4) = 8.7e-70
 Identities = 14/65 (21%), Positives = 26/65 (40%)

Query:   144 PYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQFSDLKRGLVTV 203
             P D +D+EA  +++ ++                            +++QF+DLK  L  V
Sbjct:    59 PKDDEDDEAANVFKTLELKLAQKKKKRANEKDDDNSVDSS----NVKRQFADLKESLAAV 114

Query:   204 SMDEW 208
             +  EW
Sbjct:   115 TESEW 119

 Score = 49 (22.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query:    31 DPKGYLTDLQSMIPTYGGD--INDIKKARLLLKSKHFMGVPAPLGYVA 76
             D   YL DL++       D  + D++K R +LKS        P G++A
Sbjct:   199 DALSYLKDLENDRVNSLSDATLEDLQKMRTILKSYRKADPTNPQGWIA 246


>ASPGD|ASPL0000053069 [details] [associations]
            symbol:AN1259 species:162425 "Emericella nidulans"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0005681
            "spliceosomal complex" evidence=IEA] [GO:0006396 "RNA processing"
            evidence=IEA] InterPro:IPR003107 InterPro:IPR011990
            InterPro:IPR013026 Pfam:PF02184 SMART:SM00386 GO:GO:0008380
            EMBL:BN001308 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
            GO:GO:0007049 Gene3D:1.25.40.10 eggNOG:NOG327505 KO:K12869
            RefSeq:XP_658863.1 STRING:Q5BDX1 GeneID:2877035 KEGG:ani:AN1259.2
            HOGENOM:HOG000207972 OMA:KFTFAKI OrthoDB:EOG4NKG44 Uniprot:Q5BDX1
        Length = 673

 Score = 239 (89.2 bits), Expect = 3.0e-16, P = 3.0e-16
 Identities = 129/510 (25%), Positives = 206/510 (40%)

Query:   572 VRHIPTSVRIWIKAADLETETKAKRR---VYRKALEHIPNSVRLWKAAVELE----DPED 624
             VR    ++  W++ A  E E K  RR   ++ +AL+    SV LW   +E E    +   
Sbjct:    65 VRRNRINMNNWMRYAAWELEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINH 124

Query:   625 ARILLSRAVECCPTSVELWLALARLE-TYEN---ARKVLNKARENIPTDRQIWTTAAKLE 680
             AR LL RAV   P   +LW     +E T  N    R+V  +     P D   W+   KLE
Sbjct:   125 ARNLLDRAVTILPRVDKLWYKYVYMEETLGNIPGTRQVFERWMSWEP-DEGAWSAYIKLE 183

Query:   681 EAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGV 740
             + +        I  R         V     +W K A   E+ G+      L+R + G  V
Sbjct:   184 KRYNEFERARAIFQRFTI------VHPEPRNWIKWARFEEEYGT----SDLVREVYGLAV 233

Query:   741 EQ--ED--RKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAY--FEKNHG 794
             E   ED   +  ++  A        YE ARAIY  AL   P  KSI L  AY  FEK  G
Sbjct:   234 ETLGEDFMDEKLFIAYARFETKLKEYERARAIYKYALDRLPRSKSITLHKAYTTFEKQFG 293

Query:   795 TRESLETLLQKAVAHCPKSEVLWLMGAKSNKKS--IWLRAAYFEKNHGTRESLETLLQKA 852
              RE +E ++   +A   K  V +    K N ++  +W   A  E+  G  E +  + ++A
Sbjct:   294 DREGVENVI---LA---KRRVQYEEQLKENLRNYDVWFDFARLEEQSGDPERVRDVYERA 347

Query:   853 VAHCPKSE---------VLWLMGAKSKWL-AGDVPAARGILSLAFQANPNSE----EIWL 898
             +A  P S+          LW+  A  + + A D+  AR + +   +  P+ +    ++WL
Sbjct:   348 IAQIPPSQEKRHWRRYIYLWIFYALWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWL 407

Query:   899 AAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXX 958
                + E      +                   P  ++++   + LE +  E+        
Sbjct:   408 MKAQFEVRQLNLQAARKTLGQAIGMC------PK-DKLFRGYIDLERQLFEFVRCRTLYE 460

Query:   959 XXXXSAPT-PRVMIQSAKLEWCLDNLERALQLLDEAI-KVFPDFAKL-WMMKGQIEEQKN 1015
                   P+  +  IQ A+LE  LD+ ERA  + +  I +   D  +L W      E+ + 
Sbjct:   461 KQIEWNPSNSQSWIQYAELERGLDDTERARAIYELGIDQPTLDMPELVWKAYIDFEDDEG 520

Query:  1016 LLDKAHDTFSQAIKKCPHSVPLWIMLANLE 1045
               ++    + + ++K  H V +WI  A  E
Sbjct:   521 EYERERQLYERLLQKTDH-VKVWINYARFE 549

 Score = 137 (53.3 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
 Identities = 39/121 (32%), Positives = 63/121 (52%)

Query:   982 NLERALQLLDEAIKVFPD----FAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPL 1037
             +++RA Q+  E +K+ P     FAK+W+MK Q E ++  L  A  T  QAI  CP    L
Sbjct:   380 DIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARKTLGQAIGMCPKD-KL 438

Query:  1038 WIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQ 1097
             +    +LE +    ++ R++ EK    NP+ ++ W+     E+  GL D   T  A+A+ 
Sbjct:   439 FRGYIDLERQLFEFVRCRTLYEKQIEWNPSNSQSWIQY--AELERGLDD---TERARAIY 493

Query:  1098 E 1098
             E
Sbjct:   494 E 494

 Score = 94 (38.1 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
 Identities = 42/168 (25%), Positives = 74/168 (44%)

Query:   518 WIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE----AARLQPVDTARAVIAQAVR 573
             W+  A  E    + + AR++  +  + + TS  LW+       R + ++ AR ++ +AV 
Sbjct:    75 WMRYAAWELEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAVT 134

Query:   574 HIPTSVRIWIKAADLETETKAK----RRVYRKALEHIPNSVRLWKAAVELE----DPEDA 625
              +P   ++W K   +E ET       R+V+ + +   P+    W A ++LE    + E A
Sbjct:   135 ILPRVDKLWYKYVYME-ETLGNIPGTRQVFERWMSWEPDE-GAWSAYIKLEKRYNEFERA 192

Query:   626 RILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTD 669
             R +  R     P     W+  AR E    T +  R+V   A E +  D
Sbjct:   193 RAIFQRFTIVHPEPRN-WIKWARFEEEYGTSDLVREVYGLAVETLGED 239

 Score = 80 (33.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
 Identities = 40/147 (27%), Positives = 63/147 (42%)

Query:   495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARN---LIMKGCEENQTSEDL 551
             N+ ++AR + +     +P  P  WI  AR EE  G     R    L ++   E+   E L
Sbjct:   187 NEFERARAIFQRFTIVHPE-PRNWIKWARFEEEYGTSDLVREVYGLAVETLGEDFMDEKL 245

Query:   552 WLEAAR----LQPVDTARAVIAQAVRHIPTSVRIWIKAA---------D---LETETKAK 595
             ++  AR    L+  + ARA+   A+  +P S  I +  A         D   +E    AK
Sbjct:   246 FIAYARFETKLKEYERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENVILAK 305

Query:   596 RRV-YRKALEHIPNSVRLWKAAVELED 621
             RRV Y + L+    +  +W     LE+
Sbjct:   306 RRVQYEEQLKENLRNYDVWFDFARLEE 332

 Score = 78 (32.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
 Identities = 41/193 (21%), Positives = 75/193 (38%)

Query:   496 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEA 555
             + ++AR + +   + +    P WI     E     +  ARNL+ +        + LW + 
Sbjct:    87 EFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAVTILPRVDKLWYKY 146

Query:   556 ARLQP----VDTARAVIAQAVRHIPT--SVRIWIKAADLETETKAKRRVYRK-ALEHI-P 607
               ++     +   R V  + +   P   +   +IK      E +  R ++++  + H  P
Sbjct:   147 VYMEETLGNIPGTRQVFERWMSWEPDEGAWSAYIKLEKRYNEFERARAIFQRFTIVHPEP 206

Query:   608 NSVRLWKAAVELEDPED-ARILLSRAVECCPTSV---ELWLALARLET----YENARKVL 659
              +   W    E     D  R +   AVE         +L++A AR ET    YE AR + 
Sbjct:   207 RNWIKWARFEEEYGTSDLVREVYGLAVETLGEDFMDEKLFIAYARFETKLKEYERARAIY 266

Query:   660 NKARENIPTDRQI 672
               A + +P  + I
Sbjct:   267 KYALDRLPRSKSI 279


>WB|WBGene00019762 [details] [associations]
            symbol:M03F8.3 species:6239 "Caenorhabditis elegans"
            [GO:0005622 "intracellular" evidence=IEA] [GO:0006396 "RNA
            processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0018996 "molting
            cycle, collagen and cuticulin-based cuticle" evidence=IMP]
            [GO:0040011 "locomotion" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] InterPro:IPR003107 InterPro:IPR011990
            InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293 SMART:SM00386
            GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0018996
            GO:GO:0040011 GO:GO:0000003 GO:GO:0005622 GO:GO:0006396
            Gene3D:1.25.40.10 eggNOG:NOG327505 KO:K12869 HOGENOM:HOG000207972
            OMA:KFTFAKI GeneTree:ENSGT00550000074931 EMBL:FO080495
            RefSeq:NP_001122979.1 ProteinModelPortal:A9D4S6 SMR:A9D4S6
            STRING:A9D4S6 PaxDb:A9D4S6 EnsemblMetazoa:M03F8.3b GeneID:178979
            KEGG:cel:CELE_M03F8.3 UCSC:M03F8.3a CTD:178979 WormBase:M03F8.3b
            InParanoid:A9D4S6 NextBio:903380 ArrayExpress:A9D4S6 Uniprot:A9D4S6
        Length = 747

 Score = 164 (62.8 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
 Identities = 75/295 (25%), Positives = 124/295 (42%)

Query:   582 WIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDARILLSRAVE 634
             WIK    E    E +  R V+ +AL+    S+ +W    E+E        AR +  RA+ 
Sbjct:    89 WIKYGKWEESIGEIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQINHARNVFDRAIT 148

Query:   635 CCPTSVELWLALARLE-TYEN---ARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVD 690
               P +++ WL  + +E   EN   AR++  +  E  P + Q W T    E  +       
Sbjct:   149 IMPRAMQFWLKYSYMEEVIENIPGARQIFERWIEWEPPE-QAWQTYINFELRY------- 200

Query:   691 KIIDRALSS----LSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRK 746
             K IDRA S     L  +G  IN ++W K A   E+ G +   +A     + Y  E++  +
Sbjct:   201 KEIDRARSVYQRFLHVHG--INVQNWIKYAKFEERNGYIGNARAAYEKAMEYFGEEDINE 258

Query:   747 HTWMEDAESCANQGAYECARAIYAQALATFPSKKS--IWLRAAYFEKNHGTRESLE-TLL 803
                +  A     Q  +E AR I+   L   PS ++  I+      EK  G R  +E  ++
Sbjct:   259 TVLVAFALFEERQKEHERARGIFKYGLDNLPSNRTEEIFKHYTQHEKKFGERVGIEDVII 318

Query:   804 QKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGT-RESLETLLQKAVAHCP 857
              K      K++   ++         W       +N  T RE +E + ++A+A+ P
Sbjct:   319 SKR-----KTQYEKMVEENGYNYDAWFDYLRLLENEETDREEVEDVYERAIANIP 368

 Score = 155 (59.6 bits), Expect = 4.2e-07, P = 4.2e-07
 Identities = 94/502 (18%), Positives = 184/502 (36%)

Query:   557 RLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETK---AKRRVYRKALEHIPNSVRLW 613
             R + ++ AR V  +A+  +P +++ W+K + +E   +     R+++ + +E  P   + W
Sbjct:   132 RCKQINHARNVFDRAITIMPRAMQFWLKYSYMEEVIENIPGARQIFERWIEWEPPE-QAW 190

Query:   614 KAAVELE----DPEDARILLSRAVECCPTSVELWLALARLETYE----NARKVLNKAREN 665
             +  +  E    + + AR +  R +     +V+ W+  A+ E       NAR    KA E 
Sbjct:   191 QTYINFELRYKEIDRARSVYQRFLHVHGINVQNWIKYAKFEERNGYIGNARAAYEKAMEY 250

Query:   666 IPTD---RQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFK-EAIEAEK 721
                +     +    A  EE    +     I    L +L +N  E   +H+ + E    E+
Sbjct:   251 FGEEDINETVLVAFALFEERQKEHERARGIFKYGLDNLPSNRTEEIFKHYTQHEKKFGER 310

Query:   722 AGSVHTCQALIRAIIGYGVEQEDRKH-TWMEDAESCANQGA-YECARAIYAQALATFP-- 777
              G      +  +      VE+    +  W +      N+    E    +Y +A+A  P  
Sbjct:   311 VGIEDVIISKRKTQYEKMVEENGYNYDAWFDYLRLLENEETDREEVEDVYERAIANIPPH 370

Query:   778 ---SKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAY 834
                 +K  W R  Y   N+   E L            K+ +  +         +W+  A+
Sbjct:   371 SYFQEKRYWRRYIYLWINYALYEELVAKDFDRARQVYKACIDIIPHKTFTFAKVWIMFAH 430

Query:   835 FEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSE 894
             FE       +   ++  A+  CPK + L+      +    +    R +     +++P S 
Sbjct:   431 FEIRQLDLNAARKIMGVAIGKCPKDK-LFRAYIDLELQLREFDRCRKLYEKFLESSPESS 489

Query:   895 EIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXX 954
             + W+   +LE+   + +                   P  E +W A +  E    E+E   
Sbjct:   490 QTWIKFAELETLLGDTDRSRAVFTIAVQQPALDM--P--ELLWKAYIDFEIACEEHEKAR 545

Query:   955 XXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQK 1014
                          +V I  A+ E  + N E A +  + A +   +  K   +   +E  K
Sbjct:   546 DLYETLLQRTNHIKVWISMAEFEQTIGNFEGARKAFERANQSLENAEKEERLM-LLEAWK 604

Query:  1015 NLLDKAHDTFSQAIKKCPHSVP 1036
                 K+ D   +A+K+    +P
Sbjct:   605 ECETKSGD--QEALKRVETMMP 624

 Score = 153 (58.9 bits), Expect = 6.9e-07, P = 6.9e-07
 Identities = 102/444 (22%), Positives = 175/444 (39%)

Query:   497 IKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE-- 554
             I  AR +        P     W+  + +EEV   +  AR +  +  E  +  E  W    
Sbjct:   136 INHARNVFDRAITIMPRAMQFWLKYSYMEEVIENIPGARQIFERWIEW-EPPEQAWQTYI 194

Query:   555 --AARLQPVDTARAVIAQAVRHIP-TSVRIWIKAADLETETKAKRRVYRKALEHIPNSVR 611
                 R + +D AR+V  Q   H+   +V+ WIK A  E     +R  Y      I N+  
Sbjct:   195 NFELRYKEIDRARSVY-QRFLHVHGINVQNWIKYAKFE-----ERNGY------IGNARA 242

Query:   612 LWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDR- 670
              ++ A+E    ED    ++  V      V   L   R + +E AR +     +N+P++R 
Sbjct:   243 AYEKAMEYFGEED----INETV-----LVAFALFEERQKEHERARGIFKYGLDNLPSNRT 293

Query:   671 -QIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVE---INREHWFK--EAIEAEKAGS 724
              +I+    + E+  G    ++ +I     +     VE    N + WF     +E E+   
Sbjct:   294 EEIFKHYTQHEKKFGERVGIEDVIISKRKTQYEKMVEENGYNYDAWFDYLRLLENEETDR 353

Query:   725 VHTCQALIRAIIG---YGVEQEDRK-----HTWMEDA---ESCANQGAYECARAIYAQAL 773
                     RAI     +   QE R      + W+  A   E  A    ++ AR +Y   +
Sbjct:   354 EEVEDVYERAIANIPPHSYFQEKRYWRRYIYLWINYALYEELVAKD--FDRARQVYKACI 411

Query:   774 ATFPSKK----SIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIW 829
                P K      +W+  A+FE       +   ++  A+  CPK +   L  A  + +   
Sbjct:   412 DIIPHKTFTFAKVWIMFAHFEIRQLDLNAARKIMGVAIGKCPKDK---LFRAYIDLE--- 465

Query:   830 LRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ- 888
             L+   F++    R+  E  L+ +    P+S   W+  A+ + L GD   +R + ++A Q 
Sbjct:   466 LQLREFDR---CRKLYEKFLESS----PESSQTWIKFAELETLLGDTDRSRAVFTIAVQQ 518

Query:   889 -ANPNSEEIWLAAVKLESENNEYE 911
              A    E +W A +  E    E+E
Sbjct:   519 PALDMPELLWKAYIDFEIACEEHE 542

 Score = 132 (51.5 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
 Identities = 39/162 (24%), Positives = 78/162 (48%)

Query:   518 WIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAA----RLQPVDTARAVIAQAVR 573
             WI   + EE  G++Q AR++  +  + +  S  +WL+ A    R + ++ AR V  +A+ 
Sbjct:    89 WIKYGKWEESIGEIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQINHARNVFDRAIT 148

Query:   574 HIPTSVRIWIKAADLETETK---AKRRVYRKALEHIPNSVRLWKAAVELE----DPEDAR 626
              +P +++ W+K + +E   +     R+++ + +E  P   + W+  +  E    + + AR
Sbjct:   149 IMPRAMQFWLKYSYMEEVIENIPGARQIFERWIEWEPPE-QAWQTYINFELRYKEIDRAR 207

Query:   627 ILLSRAVECCPTSVELWLALARLETYE----NARKVLNKARE 664
              +  R +     +V+ W+  A+ E       NAR    KA E
Sbjct:   208 SVYQRFLHVHGINVQNWIKYAKFEERNGYIGNARAAYEKAME 249

 Score = 111 (44.1 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
 Identities = 65/307 (21%), Positives = 125/307 (40%)

Query:   982 NLERALQLLDEAIKVFPD----FAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPL 1037
             + +RA Q+    I + P     FAK+W+M    E ++  L+ A      AI KCP    L
Sbjct:   399 DFDRARQVYKACIDIIPHKTFTFAKVWIMFAHFEIRQLDLNAARKIMGVAIGKCPKD-KL 457

Query:  1038 WIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQ 1097
             +    +LE + +   + R + EK    +P  ++ W+    +E   G  D +  +   A+Q
Sbjct:   458 FRAYIDLELQLREFDRCRKLYEKFLESSPESSQTWIKFAELETLLGDTDRSRAVFTIAVQ 517

Query:  1098 E--CPNAGILWAEAIFLEPRPQRKTKSVDALKKC-EHDPHVLLAVSKLFWCENKNQKCHR 1154
             +       +LW   I  E   +   K+ D  +   +   H+ + +S     E +    + 
Sbjct:   518 QPALDMPELLWKAYIDFEIACEEHEKARDLYETLLQRTNHIKVWISM---AEFEQTIGNF 574

Query:  1155 SGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKLFW--CENKNQKCREWFNRTVKIDPDLG 1212
              G+R+      ++  +L+  E +  ++L  +   W  CE K+   +E   R   + P   
Sbjct:   575 EGARKAF---ERANQSLENAEKEERLMLLEA---WKECETKSGD-QEALKRVETMMPRRV 627

Query:  1213 DAWAYFYKFEIIN-GTEETQAEVKKRCLAAEPKHGENWCRVAKNVSNWKLPRETILSLVA 1271
                      + ++ G EE    +  +  AA+        ++ +  + WK  RE   +  A
Sbjct:   628 KKRRQIQTEDGVDAGWEEYFDYIFPQDQAAKGSF-----KLLEAAARWKREREEAAARAA 682

Query:  1272 KDLPIPI 1278
             ++L  PI
Sbjct:   683 QELDAPI 689

 Score = 106 (42.4 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
 Identities = 57/254 (22%), Positives = 109/254 (42%)

Query:   575 IPTSVRIWIKAAD-LETETKAKRRVY----RKALEHIPNSVRLWKAAVELEDPEDARILL 629
             IP + +  I   D L+   + KR+ +    RK    + N ++  K    + + + AR + 
Sbjct:    50 IPPAPKTKITDPDELKEYQRKKRKEFEDGIRKNRMQLANWIKYGKWEESIGEIQRARSVF 109

Query:   630 SRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTDRQIWTTAAKLEEAHGN 685
              RA++    S+ +WL  A +E       +AR V ++A   +P   Q W   + +EE   N
Sbjct:   110 ERALDVDHRSISIWLQYAEMEMRCKQINHARNVFDRAITIMPRAMQFWLKYSYMEEVIEN 169

Query:   686 NAMVDKIIDRALS---SLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQ 742
                  +I +R +       A    IN E  +KE    ++A SV+  Q  +     +G+  
Sbjct:   170 IPGARQIFERWIEWEPPEQAWQTYINFELRYKEI---DRARSVY--QRFLHV---HGINV 221

Query:   743 EDRKHTWMEDAESCANQGAYECARAIYAQALATFPSK---KSIWLRAAYFEKNHGTRESL 799
             ++    W++ A+     G    ARA Y +A+  F  +   +++ +  A FE+     E  
Sbjct:   222 QN----WIKYAKFEERNGYIGNARAAYEKAMEYFGEEDINETVLVAFALFEERQKEHERA 277

Query:   800 ETLLQKAVAHCPKS 813
               + +  + + P +
Sbjct:   278 RGIFKYGLDNLPSN 291

 Score = 100 (40.3 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
 Identities = 42/200 (21%), Positives = 81/200 (40%)

Query:   935 EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEAI 994
             ++W+     E    +               P  ++      LE  L   +R  +L ++ +
Sbjct:   423 KVWIMFAHFEIRQLDLNAARKIMGVAIGKCPKDKLFRAYIDLELQLREFDRCRKLYEKFL 482

Query:   995 KVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKMLI 1052
             +  P+ ++ W+   ++E      D++   F+ A+++    +P  LW    + E   +   
Sbjct:   483 ESSPESSQTWIKFAELETLLGDTDRSRAVFTIAVQQPALDMPELLWKAYIDFEIACEEHE 542

Query:  1053 KARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFL 1112
             KAR + E   L+  N  ++W++    E   G  + A     +A Q   NA       + L
Sbjct:   543 KARDLYET-LLQRTNHIKVWISMAEFEQTIGNFEGARKAFERANQSLENAE-KEERLMLL 600

Query:  1113 EPRPQRKTKSVD--ALKKCE 1130
             E   + +TKS D  ALK+ E
Sbjct:   601 EAWKECETKSGDQEALKRVE 620

 Score = 71 (30.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
 Identities = 16/81 (19%), Positives = 38/81 (46%)

Query:   820 GAKSNKKSI--WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVP 877
             G + N+  +  W++   +E++ G  +   ++ ++A+    +S  +WL  A+ +     + 
Sbjct:    78 GIRKNRMQLANWIKYGKWEESIGEIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQIN 137

Query:   878 AARGILSLAFQANPNSEEIWL 898
              AR +   A    P + + WL
Sbjct:   138 HARNVFDRAITIMPRAMQFWL 158

 Score = 70 (29.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query:   827 SIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLA 886
             SIWL+ A  E           +  +A+   P++   WL  +  + +  ++P AR I    
Sbjct:   121 SIWLQYAEMEMRCKQINHARNVFDRAITIMPRAMQFWLKYSYMEEVIENIPGARQIFERW 180

Query:   887 FQANPNSEEIWLAAVKLESENNEYE 911
              +  P  E+ W   +  E    E +
Sbjct:   181 IEWEP-PEQAWQTYINFELRYKEID 204

 Score = 65 (27.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
 Identities = 31/153 (20%), Positives = 64/153 (41%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWL 553
             I +I++AR + +   + +      W+  A +E    ++  ARN+  +       +   WL
Sbjct:    99 IGEIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQINHARNVFDRAITIMPRAMQFWL 158

Query:   554 EAARLQPV----DTARAVIAQAVRHIPTSVRIWIKAADLETETKA---KRRVYRKALEHI 606
             + + ++ V      AR +  + +   P   + W    + E   K     R VY++ L H+
Sbjct:   159 KYSYMEEVIENIPGARQIFERWIEWEPPE-QAWQTYINFELRYKEIDRARSVYQRFL-HV 216

Query:   607 PN-SVRLWKAAVELEDPE----DARILLSRAVE 634
                +V+ W    + E+      +AR    +A+E
Sbjct:   217 HGINVQNWIKYAKFEERNGYIGNARAAYEKAME 249


>UNIPROTKB|Q5JY65 [details] [associations]
            symbol:CRNKL1 "Crooked neck-like protein 1" species:9606
            "Homo sapiens" [GO:0005622 "intracellular" evidence=IEA]
            [GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR003107
            InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293
            SMART:SM00386 GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10
            HOGENOM:HOG000207972 EMBL:AL035454 IPI:IPI00219317
            UniGene:Hs.171342 HGNC:HGNC:15762 HOVERGEN:HBG051046
            OrthoDB:EOG4SJ5DC SMR:Q5JY65 IntAct:Q5JY65 Ensembl:ENST00000377327
            Uniprot:Q5JY65
        Length = 836

 Score = 161 (61.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
 Identities = 94/460 (20%), Positives = 170/460 (36%)

Query:   561 VDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAV 617
             V+ AR +  +A+  +P   + W K   +E         R+V+ + +E  P   + W + +
Sbjct:   280 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE-QAWHSYI 338

Query:   618 ELE----DPEDARILLSRAVECCPTSVELWLALARLET----YENARKVLNKARE---NI 666
               E    + + AR +  R V   P  V+ W+  AR E     + +ARKV  +A E   + 
Sbjct:   339 NFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDE 397

Query:   667 PTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKE-AIEAEKAGSV 725
               D  ++   AK EE       V  I   AL  +S      + +  FK   I  +K G  
Sbjct:   398 HMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQ----DAQELFKNYTIFEKKFGDR 453

Query:   726 HTCQALIRAIIGYGVEQEDRKH-----TWMEDAESCANQGAYECARAIYAQALATFP--S 778
                + +I +   +  E+E + +      W +      +    E  R +Y +A+A  P   
Sbjct:   454 RGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQ 513

Query:   779 KKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKN 838
             +K  W R  Y   N+   E LE    +      ++ +  +   K     +W+  A FE  
Sbjct:   514 EKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIR 573

Query:   839 HGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWL 898
                       L  ++  CPK++ L+ +  + +    +    R +     +  P +   W+
Sbjct:   574 QKNLSLARRALGTSIGKCPKNK-LFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWI 632

Query:   899 AAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXX 958
                +LE+   + +                   P  E +W + +  E E  E E       
Sbjct:   633 KFAELETILGDIDRARAIYELAISQPRLDM--P--EVLWKSYIDFEIEQEETERTRNLYR 688

Query:   959 XXXXSAPTPRVMIQSAKLEWCLD---NLERALQLLDEAIK 995
                      +V I  A+ E       +L +  Q+ +EA K
Sbjct:   689 RLLQRTQHVKVWISFAQFELSSGKEGSLTKCRQIYEEANK 728

 Score = 147 (56.8 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
 Identities = 79/338 (23%), Positives = 141/338 (41%)

Query:   392 RNPRAEKFTPLPDSVLRGNLGGES-TGAIDPNSGLMSQIPGT-------ATPGMLTPSGD 443
             R  R+    PLP  V R  L  ES   ++   S  ++ +PGT       A     T +G 
Sbjct:   101 RGQRSVLQVPLP--VPRSCLFSESFVVSVSSQSRFLASVPGTGVQRSTAADMAASTAAGK 158

Query:   444 LDLRKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIK--KAR 501
               + K+ + +N     ++   ++ ++ +        L        T   ++ND K  K +
Sbjct:   159 QRIPKVAKVKNKAP-AEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRK 217

Query:   502 LLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQ-- 559
                 ++R+ N      WI  A+ EE   ++Q AR++  +  + +  +  LWL+ A ++  
Sbjct:   218 TFEDNIRK-NRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMK 276

Query:   560 --PVDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWK 614
                V+ AR +  +A+  +P   + W K   +E         R+V+ + +E  P   + W 
Sbjct:   277 NRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE-QAWH 335

Query:   615 AAVELE----DPEDARILLSRAVECCPTSVELWLALARLET----YENARKVLNKARE-- 664
             + +  E    + + AR +  R V   P  V+ W+  AR E     + +ARKV  +A E  
Sbjct:   336 SYINFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHAYFAHARKVYERAVEFF 394

Query:   665 -NIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLS 701
              +   D  ++   AK EE       V  I   AL  +S
Sbjct:   395 GDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIS 432

 Score = 141 (54.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 93/512 (18%), Positives = 193/512 (37%)

Query:   600 RKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             RK    I N ++  +    L++ + AR +  RA++    ++ LWL  A +E       +A
Sbjct:   224 RKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHA 283

Query:   656 RKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALS---SLSANGVEINREHW 712
             R + ++A   +P   Q W     +EE  GN A   ++ +R +       A    IN E  
Sbjct:   284 RNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 343

Query:   713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQA 772
             +KE    ++A +++    L+           D K+ W++ A        +  AR +Y +A
Sbjct:   344 YKEV---DRARTIYERFVLVHP---------DVKN-WIKYARFEEKHAYFAHARKVYERA 390

Query:   773 LATFPSK---KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIW 829
             +  F  +   + +++  A FE+N    E +  + + A+    K +           + ++
Sbjct:   391 VEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQDA----------QELF 440

Query:   830 LRAAYFEKNHGTRESLETLL--------QKAVAHCPKSEVLWLMGAKSKWLAGDVPAARG 881
                  FEK  G R  +E ++        ++ V   P +   W    +      +  A R 
Sbjct:   441 KNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVRE 500

Query:   882 ILSLAFQANPNSEEI--WLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN--PNSE--- 934
             +   A    P  +E   W   + L      YE                     P+ +   
Sbjct:   501 VYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTF 560

Query:   935 -EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEA 993
              ++W+   + E                    P  ++     +LE  L   +R  +L ++ 
Sbjct:   561 AKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRKLYEKF 620

Query:   994 IKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKML 1051
             ++  P+    W+   ++E     +D+A   +  AI +    +P  LW    + E  ++  
Sbjct:   621 LEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKSYIDFEIEQEET 680

Query:  1052 IKARSVLEKGRLRNPNCAELWLAAIRVEIRAG 1083
              + R++  +  L+     ++W++  + E+ +G
Sbjct:   681 ERTRNLYRR-LLQRTQHVKVWISFAQFELSSG 711

 Score = 107 (42.7 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
 Identities = 50/210 (23%), Positives = 90/210 (42%)

Query:   984 ERALQLLDEAIKVFPD----FAKLWMMKGQIE-EQKNLLDKAHDTFSQAIKKCPHSVPLW 1038
             ER  Q+   ++++ P     FAK+W++  Q E  QKNL   A      +I KCP +  L+
Sbjct:   540 ERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNL-SLARRALGTSIGKCPKN-KLF 597

Query:  1039 IMLANLEERRKMLIKARSVLEKGRLRNP-NCAELWLAAIRVEIRAGLKDIANTMMAKALQ 1097
              +   LE + +   + R + EK     P NC   W+    +E   G  D A  +   A+ 
Sbjct:   598 KVYIELELQLREFDRCRKLYEKFLEFGPENCTS-WIKFAELETILGDIDRARAIYELAIS 656

Query:  1098 ECPNAG---ILWAEAIFLEPRPQRKTKSVDALKKC-EHDPHVLLAVSKLFWCENKNQKCH 1153
             + P      +LW   I  E   +   ++ +  ++  +   HV + +S   + E  + K  
Sbjct:   657 Q-PRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHVKVWISFAQF-ELSSGK-- 712

Query:  1154 RSGS-RRCMGVKTKSVDALKKCEHDPHVLL 1182
               GS  +C  +  ++   ++ CE     L+
Sbjct:   713 -EGSLTKCRQIYEEANKTMRNCEEKEERLM 741

 Score = 51 (23.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
 Identities = 26/127 (20%), Positives = 58/127 (45%)

Query:  1105 LWAE-AIF--LEPRPQRKTKSVDALKKCEHDPHVLLAVSKLF--WCENKNQKCHRSGSRR 1159
             LW   A++  LE +   +T+ V      E  PH     +K++  + + + ++ + S +RR
Sbjct:   524 LWINYALYEELEAKDPERTRQVYQAS-LELIPHKKFTFAKMWILYAQFEIRQKNLSLARR 582

Query:  1160 CMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFY 1219
              +G       ++ KC  +    + + +L     +  +CR+ + + ++  P+   +W  F 
Sbjct:   583 ALGT------SIGKCPKNKLFKVYI-ELELQLREFDRCRKLYEKFLEFGPENCTSWIKFA 635

Query:  1220 KFEIING 1226
             + E I G
Sbjct:   636 ELETILG 642

 Score = 38 (18.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
 Identities = 12/52 (23%), Positives = 26/52 (50%)

Query:   982 NLERALQLLDEAIKVFPDFAKLWMMKGQ---IEEQKNLLDKAHDTFSQAIKK 1030
             NL R L    + +KV+  FA+  +  G+   + + + + ++A+ T     +K
Sbjct:   685 NLYRRLLQRTQHVKVWISFAQFELSSGKEGSLTKCRQIYEEANKTMRNCEEK 736

 Score = 38 (18.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query:  1191 ENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTE 1228
             + + ++ R  + R ++    +   W  F +FE+ +G E
Sbjct:   677 QEETERTRNLYRRLLQRTQHV-KVWISFAQFELSSGKE 713


>UNIPROTKB|Q9BZJ0 [details] [associations]
            symbol:CRNKL1 "Crooked neck-like protein 1" species:9606
            "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IEA] [GO:0000245 "spliceosomal complex
            assembly" evidence=IDA] [GO:0005681 "spliceosomal complex"
            evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR003107
            InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 SMART:SM00386
            EMBL:AF318303 GO:GO:0005737 GO:GO:0016607 GO:GO:0003723
            Gene3D:1.25.40.10 GO:GO:0071013 GO:GO:0000245 eggNOG:NOG327505
            KO:K12869 OMA:KFTFAKI EMBL:AF255443 EMBL:AF318302 EMBL:AF318304
            EMBL:AF318305 EMBL:AF111802 EMBL:AK023246 EMBL:AK023728
            EMBL:AK292799 EMBL:AL035454 EMBL:AK022908 IPI:IPI00177437
            IPI:IPI00219317 IPI:IPI00219318 IPI:IPI00219320 IPI:IPI01011870
            RefSeq:NP_057736.4 UniGene:Hs.171342 ProteinModelPortal:Q9BZJ0
            SMR:Q9BZJ0 IntAct:Q9BZJ0 STRING:Q9BZJ0 PhosphoSite:Q9BZJ0
            DMDM:147744555 PaxDb:Q9BZJ0 PRIDE:Q9BZJ0 DNASU:51340
            Ensembl:ENST00000377340 Ensembl:ENST00000490910
            Ensembl:ENST00000496549 Ensembl:ENST00000536226 GeneID:51340
            KEGG:hsa:51340 UCSC:uc002wrs.3 CTD:51340 GeneCards:GC20M019963
            H-InvDB:HIX0015678 HGNC:HGNC:15762 MIM:610952 neXtProt:NX_Q9BZJ0
            PharmGKB:PA26886 HOVERGEN:HBG051046 InParanoid:Q9BZJ0
            GenomeRNAi:51340 NextBio:54782 ArrayExpress:Q9BZJ0 Bgee:Q9BZJ0
            Genevestigator:Q9BZJ0 GermOnline:ENSG00000101343 Uniprot:Q9BZJ0
        Length = 848

 Score = 161 (61.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
 Identities = 94/460 (20%), Positives = 170/460 (36%)

Query:   561 VDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAV 617
             V+ AR +  +A+  +P   + W K   +E         R+V+ + +E  P   + W + +
Sbjct:   292 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE-QAWHSYI 350

Query:   618 ELE----DPEDARILLSRAVECCPTSVELWLALARLET----YENARKVLNKARE---NI 666
               E    + + AR +  R V   P  V+ W+  AR E     + +ARKV  +A E   + 
Sbjct:   351 NFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDE 409

Query:   667 PTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKE-AIEAEKAGSV 725
               D  ++   AK EE       V  I   AL  +S      + +  FK   I  +K G  
Sbjct:   410 HMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQ----DAQELFKNYTIFEKKFGDR 465

Query:   726 HTCQALIRAIIGYGVEQEDRKH-----TWMEDAESCANQGAYECARAIYAQALATFP--S 778
                + +I +   +  E+E + +      W +      +    E  R +Y +A+A  P   
Sbjct:   466 RGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQ 525

Query:   779 KKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKN 838
             +K  W R  Y   N+   E LE    +      ++ +  +   K     +W+  A FE  
Sbjct:   526 EKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIR 585

Query:   839 HGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWL 898
                       L  ++  CPK++ L+ +  + +    +    R +     +  P +   W+
Sbjct:   586 QKNLSLARRALGTSIGKCPKNK-LFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWI 644

Query:   899 AAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXX 958
                +LE+   + +                   P  E +W + +  E E  E E       
Sbjct:   645 KFAELETILGDIDRARAIYELAISQPRLDM--P--EVLWKSYIDFEIEQEETERTRNLYR 700

Query:   959 XXXXSAPTPRVMIQSAKLEWCLD---NLERALQLLDEAIK 995
                      +V I  A+ E       +L +  Q+ +EA K
Sbjct:   701 RLLQRTQHVKVWISFAQFELSSGKEGSLTKCRQIYEEANK 740

 Score = 147 (56.8 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
 Identities = 79/338 (23%), Positives = 141/338 (41%)

Query:   392 RNPRAEKFTPLPDSVLRGNLGGES-TGAIDPNSGLMSQIPGT-------ATPGMLTPSGD 443
             R  R+    PLP  V R  L  ES   ++   S  ++ +PGT       A     T +G 
Sbjct:   113 RGQRSVLQVPLP--VPRSCLFSESFVVSVSSQSRFLASVPGTGVQRSTAADMAASTAAGK 170

Query:   444 LDLRKMGQARNTLMNVKLNQISDSVVGQTVVDPKGYLTDLQSMIPTYGGDINDIK--KAR 501
               + K+ + +N     ++   ++ ++ +        L        T   ++ND K  K +
Sbjct:   171 QRIPKVAKVKNKAP-AEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRK 229

Query:   502 LLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQ-- 559
                 ++R+ N      WI  A+ EE   ++Q AR++  +  + +  +  LWL+ A ++  
Sbjct:   230 TFEDNIRK-NRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMK 288

Query:   560 --PVDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWK 614
                V+ AR +  +A+  +P   + W K   +E         R+V+ + +E  P   + W 
Sbjct:   289 NRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE-QAWH 347

Query:   615 AAVELE----DPEDARILLSRAVECCPTSVELWLALARLET----YENARKVLNKARE-- 664
             + +  E    + + AR +  R V   P  V+ W+  AR E     + +ARKV  +A E  
Sbjct:   348 SYINFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHAYFAHARKVYERAVEFF 406

Query:   665 -NIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLS 701
              +   D  ++   AK EE       V  I   AL  +S
Sbjct:   407 GDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIS 444

 Score = 141 (54.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
 Identities = 93/512 (18%), Positives = 193/512 (37%)

Query:   600 RKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             RK    I N ++  +    L++ + AR +  RA++    ++ LWL  A +E       +A
Sbjct:   236 RKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHA 295

Query:   656 RKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALS---SLSANGVEINREHW 712
             R + ++A   +P   Q W     +EE  GN A   ++ +R +       A    IN E  
Sbjct:   296 RNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 355

Query:   713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQA 772
             +KE    ++A +++    L+           D K+ W++ A        +  AR +Y +A
Sbjct:   356 YKEV---DRARTIYERFVLVHP---------DVKN-WIKYARFEEKHAYFAHARKVYERA 402

Query:   773 LATFPSK---KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIW 829
             +  F  +   + +++  A FE+N    E +  + + A+    K +           + ++
Sbjct:   403 VEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQDA----------QELF 452

Query:   830 LRAAYFEKNHGTRESLETLL--------QKAVAHCPKSEVLWLMGAKSKWLAGDVPAARG 881
                  FEK  G R  +E ++        ++ V   P +   W    +      +  A R 
Sbjct:   453 KNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVRE 512

Query:   882 ILSLAFQANPNSEEI--WLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN--PNSE--- 934
             +   A    P  +E   W   + L      YE                     P+ +   
Sbjct:   513 VYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTF 572

Query:   935 -EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEA 993
              ++W+   + E                    P  ++     +LE  L   +R  +L ++ 
Sbjct:   573 AKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRKLYEKF 632

Query:   994 IKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKML 1051
             ++  P+    W+   ++E     +D+A   +  AI +    +P  LW    + E  ++  
Sbjct:   633 LEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKSYIDFEIEQEET 692

Query:  1052 IKARSVLEKGRLRNPNCAELWLAAIRVEIRAG 1083
              + R++  +  L+     ++W++  + E+ +G
Sbjct:   693 ERTRNLYRR-LLQRTQHVKVWISFAQFELSSG 723

 Score = 107 (42.7 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
 Identities = 50/210 (23%), Positives = 90/210 (42%)

Query:   984 ERALQLLDEAIKVFPD----FAKLWMMKGQIE-EQKNLLDKAHDTFSQAIKKCPHSVPLW 1038
             ER  Q+   ++++ P     FAK+W++  Q E  QKNL   A      +I KCP +  L+
Sbjct:   552 ERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNL-SLARRALGTSIGKCPKN-KLF 609

Query:  1039 IMLANLEERRKMLIKARSVLEKGRLRNP-NCAELWLAAIRVEIRAGLKDIANTMMAKALQ 1097
              +   LE + +   + R + EK     P NC   W+    +E   G  D A  +   A+ 
Sbjct:   610 KVYIELELQLREFDRCRKLYEKFLEFGPENCTS-WIKFAELETILGDIDRARAIYELAIS 668

Query:  1098 ECPNAG---ILWAEAIFLEPRPQRKTKSVDALKKC-EHDPHVLLAVSKLFWCENKNQKCH 1153
             + P      +LW   I  E   +   ++ +  ++  +   HV + +S   + E  + K  
Sbjct:   669 Q-PRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHVKVWISFAQF-ELSSGK-- 724

Query:  1154 RSGS-RRCMGVKTKSVDALKKCEHDPHVLL 1182
               GS  +C  +  ++   ++ CE     L+
Sbjct:   725 -EGSLTKCRQIYEEANKTMRNCEEKEERLM 753

 Score = 51 (23.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
 Identities = 26/127 (20%), Positives = 58/127 (45%)

Query:  1105 LWAE-AIF--LEPRPQRKTKSVDALKKCEHDPHVLLAVSKLF--WCENKNQKCHRSGSRR 1159
             LW   A++  LE +   +T+ V      E  PH     +K++  + + + ++ + S +RR
Sbjct:   536 LWINYALYEELEAKDPERTRQVYQAS-LELIPHKKFTFAKMWILYAQFEIRQKNLSLARR 594

Query:  1160 CMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFY 1219
              +G       ++ KC  +    + + +L     +  +CR+ + + ++  P+   +W  F 
Sbjct:   595 ALGT------SIGKCPKNKLFKVYI-ELELQLREFDRCRKLYEKFLEFGPENCTSWIKFA 647

Query:  1220 KFEIING 1226
             + E I G
Sbjct:   648 ELETILG 654

 Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
 Identities = 12/52 (23%), Positives = 26/52 (50%)

Query:   982 NLERALQLLDEAIKVFPDFAKLWMMKGQ---IEEQKNLLDKAHDTFSQAIKK 1030
             NL R L    + +KV+  FA+  +  G+   + + + + ++A+ T     +K
Sbjct:   697 NLYRRLLQRTQHVKVWISFAQFELSSGKEGSLTKCRQIYEEANKTMRNCEEK 748

 Score = 38 (18.4 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query:  1191 ENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTE 1228
             + + ++ R  + R ++    +   W  F +FE+ +G E
Sbjct:   689 QEETERTRNLYRRLLQRTQHV-KVWISFAQFELSSGKE 725


>ZFIN|ZDB-GENE-040426-694 [details] [associations]
            symbol:crnkl1 "crooked neck pre-mRNA splicing
            factor-like 1 (Drosophila)" species:7955 "Danio rerio" [GO:0005622
            "intracellular" evidence=IEA] [GO:0006396 "RNA processing"
            evidence=IEA] InterPro:IPR003107 InterPro:IPR011990
            InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293 SMART:SM00386
            ZFIN:ZDB-GENE-040426-694 GO:GO:0005622 GO:GO:0006396
            Gene3D:1.25.40.10 GeneTree:ENSGT00550000074931 EMBL:CABZ01008082
            EMBL:CABZ01008083 EMBL:CABZ01008084 IPI:IPI00932828
            Ensembl:ENSDART00000112689 ArrayExpress:E7FGM7 Bgee:E7FGM7
            Uniprot:E7FGM7
        Length = 754

 Score = 195 (73.7 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 111/547 (20%), Positives = 207/547 (37%)

Query:   476 PKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAAR 535
             PK  +TD + +      D   +KK +    ++R+ N      WI  A+ EE   +VQ +R
Sbjct:    48 PKQKITDKEEL-----NDYK-LKKRKGFEDNIRK-NRTVISNWIKYAQWEESLQEVQRSR 100

Query:   536 NLIMKGCEENQTSEDLWLEAARLQ----PVDTARAVIAQAVRHIPTSVRIWIKAADLET- 590
             ++  +  + +  +  LWL+ A ++     V+ AR +  +A+  +P   + W K   +E  
Sbjct:   101 SIYERALDVDHRNITLWLKYAEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYTYMEEM 160

Query:   591 --ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDARILLSRAVECCPTSVELWL 644
                    R+V+ + +E  P   + W + +  E    + + AR +  +A+      V+ W+
Sbjct:   161 LGNIAGCRQVFERWMEWEPEE-QAWHSYINFELRYKEVDKARSIYEKALVMVHPEVKNWI 219

Query:   645 ALARLET---Y-ENARKVLNKARENIPTDR---QIWTTAAKLEEAHGNNAMVDKIIDRAL 697
               A  E    Y    RKV  +A E    ++    ++   A+ EE       V  I   AL
Sbjct:   220 KYAHFEEKHGYVARGRKVFERAVEFFGEEQVSENLYVAFARFEEKQKEFERVRVIYKYAL 279

Query:   698 SSL-SANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHT---WMEDA 753
               +      E+ + +   E    ++ G      +  R    Y  E +   H    W +  
Sbjct:   280 DRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRR--FQYEEEVKANPHNYDAWFDYL 337

Query:   754 ESCANQGAYECARAIYAQALATFP--SKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCP 811
                 +    +  R +Y +A+A  P   +K  W R  Y   N+   E LE    +      
Sbjct:   338 RLVESDADADTVREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVY 397

Query:   812 KSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKW 871
             K+ +  +   K     IWL    FE      ++    L  A+  CPK++ L+    + + 
Sbjct:   398 KACLELIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCPKNK-LFKGYIELEL 456

Query:   872 LAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNP 931
                +    R +     + +P +   W+   +LE+   + +                   P
Sbjct:   457 QLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDTDRSRAIFELAIGQPRLDM--P 514

Query:   932 NSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDN---LERALQ 988
               E +W + +  E E  EY+                +V I  A+ E  +D    ++R  Q
Sbjct:   515 --EVLWKSYIDFEIEQEEYDNTRGLYKRLLQRTQHVKVWISYAQFELSIDTEDRVQRCRQ 572

Query:   989 LLDEAIK 995
             + +EA K
Sbjct:   573 VYEEANK 579

 Score = 146 (56.5 bits), Expect = 4.0e-06, P = 4.0e-06
 Identities = 113/575 (19%), Positives = 217/575 (37%)

Query:   566 AVIAQAVRHIPTSVRIWIKA-ADLE-TETKAKRRVYRKALEHIPNSVRLWKAAVELEDPE 623
             A  A   + IP   ++  KA A+++ T  +  R    + LE +P   +  +   + E+  
Sbjct:     2 ASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPK--QKITDKEELN 59

Query:   624 DARILLSRAVECC----PTSVELWLALAR----LETYENARKVLNKARENIPTDRQIWTT 675
             D ++   +  E       T +  W+  A+    L+  + +R +  +A +    +  +W  
Sbjct:    60 DYKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLQEVQRSRSIYERALDVDHRNITLWLK 119

Query:   676 AAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAI 735
              A++E  +        I DRA++ L      +N + W+K     E  G++  C    R +
Sbjct:   120 YAEMEMKNRQVNHARNIWDRAITILP----RVN-QFWYKYTYMEEMLGNIAGC----RQV 170

Query:   736 IGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALA-TFPSKKSIWLRAAYFEKNHG 794
                 +E E  +  W             + AR+IY +AL    P  K+ W++ A+FE+ HG
Sbjct:   171 FERWMEWEPEEQAWHSYINFELRYKEVDKARSIYEKALVMVHPEVKN-WIKYAHFEEKHG 229

Query:   795 TRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVA 854
                    + ++AV            G +   +++++  A FE+     E +  + + A+ 
Sbjct:   230 YVARGRKVFERAVE---------FFGEEQVSENLYVAFARFEEKQKEFERVRVIYKYALD 280

Query:   855 HCPKSEVLWLMGAKSKWLA--GDVPAARGIL--SLAFQ------ANPNSEEIWLAAVKLE 904
               PK +   L    + +    GD      ++     FQ      ANP++ + W   ++L 
Sbjct:   281 RIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLV 340

Query:   905 SENNEYEXXXXXXXXXXXXXXXXXXNPNSEE---IWLA-AVKLESENNEYEXXXXXXXXX 960
               + + +                    +      +W+  A+  E E  + E         
Sbjct:   341 ESDADADTVREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYKAC 400

Query:   961 XXSAPTPR-----VMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKN 1015
                 P  +     + +   + E    NL+ A + L  AI   P   K  + KG IE +  
Sbjct:   401 LELIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCP---KNKLFKGYIELELQ 457

Query:  1016 L--LDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEK--GRLRNPNCAEL 1071
             L   D+    + + ++  P +   WI  A LE       ++R++ E   G+ R      L
Sbjct:   458 LREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDTDRSRAIFELAIGQPRLDMPEVL 517

Query:  1072 WLAAIRVEIRAGLKDIANTMMAKALQECPNAGILW 1106
             W + I  EI     D    +  + LQ   +  + W
Sbjct:   518 WKSYIDFEIEQEEYDNTRGLYKRLLQRTQHVKV-W 551


>TAIR|locus:2089999 [details] [associations]
            symbol:AT3G13210 species:3702 "Arabidopsis thaliana"
            [GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IEA] [GO:0006396 "RNA processing" evidence=IEA;ISS]
            [GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR003107
            InterPro:IPR008847 InterPro:IPR011990 InterPro:IPR013026
            Pfam:PF02184 Pfam:PF05843 PROSITE:PS50293 SMART:SM00386
            GO:GO:0005634 EMBL:CP002686 GO:GO:0006397 Gene3D:1.25.40.10
            IPI:IPI00519685 RefSeq:NP_187927.1 UniGene:At.53288
            ProteinModelPortal:F4JC74 SMR:F4JC74 EnsemblPlants:AT3G13210.1
            GeneID:820511 KEGG:ath:AT3G13210 OMA:NEARNVW Uniprot:F4JC74
        Length = 657

 Score = 159 (61.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
 Identities = 96/433 (22%), Positives = 168/433 (38%)

Query:   498 KKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSED-LWLEAA 556
             K A L L  + +   N  PA I     E++  + +  +    +    NQT  D   L   
Sbjct:    17 KDAELKLPRMTQVK-NKTPAPI-QITAEQILREARERQEAEFR--PPNQTITDSAELSDY 72

Query:   557 RLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKA---KRRVYRKALEHIPNSVRLW 613
             RL+     R      +R    + ++W+K AD E + K+    R V+ +A+  +P   +LW
Sbjct:    73 RLR----RRKEFEDQIRRARLNTQVWVKYADFEMKNKSVNEARNVWDRAVSLLPRVDQLW 128

Query:   614 KAAVELEDP----EDARILLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTD 669
                + +E+       AR +L R + C P   + WL   + E   N  +      E     
Sbjct:   129 YKFIHMEEKLGNIAGARQILERWIHCSPDQ-QAWLCFIKFELKYNEIECARSIYERFVLC 187

Query:   670 R---QIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANG-VEI------NREHWFKEAIEA 719
                   +   AK E  HG   +  K+ +RA   L+ +   EI        E  +K A++ 
Sbjct:   188 HPKVSAYIRYAKFEMKHGQVELAMKVFERAKKELADDEEAEILFVAFAEFEEQYKFALDQ 247

Query:   720 EKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSK 779
                G       L    + +  +  D++   +EDA      G   C    Y   +   P  
Sbjct:   248 IPKGRAEN---LYSKFVAFEKQNGDKEG--IEDAII----GKRRCQ---YEDEVRKNPLN 295

Query:   780 KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSI--WLRAAYF-- 835
                W      E+  G ++ +  + ++AVA+ P  E       +  ++ I  W+  A+F  
Sbjct:   296 YDSWFDFVRLEETVGNKDRIREIYERAVANVPPPEA---QEKRYWQRYIYLWINYAFFAE 352

Query:   836 ---EKNHGTRESLETLLQKAVAHCPKSEV-LWLMGAKSKWLAGDVPAARGILSLAFQANP 891
                E    TR+     L K + H   S   +WL+ A+ +    ++  AR IL  A    P
Sbjct:   353 MVTEDVESTRDVYRACL-KLIPHSKFSFAKIWLLAAQHEIRQLNLTGARQILGNAIGKAP 411

Query:   892 NSEEIWLAAVKLE 904
               ++I+   +++E
Sbjct:   412 K-DKIFKKYIEIE 423

 Score = 101 (40.6 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
 Identities = 27/92 (29%), Positives = 47/92 (51%)

Query:   821 AKSNKKSIWLRAAYFE-KNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAA 879
             A+ N + +W++ A FE KN    E+   +  +AV+  P+ + LW      +   G++  A
Sbjct:    87 ARLNTQ-VWVKYADFEMKNKSVNEA-RNVWDRAVSLLPRVDQLWYKFIHMEEKLGNIAGA 144

Query:   880 RGILSLAFQANPNSEEIWLAAVKLESENNEYE 911
             R IL      +P+ ++ WL  +K E + NE E
Sbjct:   145 RQILERWIHCSPD-QQAWLCFIKFELKYNEIE 175

 Score = 82 (33.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
 Identities = 30/150 (20%), Positives = 58/150 (38%)

Query:   935 EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEAI 994
             +IWL A + E                   AP  ++  +  ++E  L N++R  +L +  +
Sbjct:   381 KIWLLAAQHEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLRNIDRCRKLYERYL 440

Query:   995 KVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKMLI 1052
             +  P     W    + E      ++    F  AI +    +P  LW    + E     L 
Sbjct:   441 EWSPGNCYAWRKYAEFEMSLAETERTRAIFELAISQPALDMPELLWKTYIDFEISEGELE 500

Query:  1053 KARSVLEKGRLRNPNCAELWLAAIRVEIRA 1082
             + R++ E+   R  +C ++W+   + E  A
Sbjct:   501 RTRALYERLLDRTKHC-KVWVDFAKFEASA 529


>UNIPROTKB|J9P5Z1 [details] [associations]
            symbol:CRNKL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003107
            InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293
            SMART:SM00386 GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10
            GeneTree:ENSGT00550000074931 EMBL:AAEX03013754
            Ensembl:ENSCAFT00000047479 Uniprot:J9P5Z1
        Length = 728

 Score = 159 (61.0 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 96/460 (20%), Positives = 168/460 (36%)

Query:   561 VDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAV 617
             V+ AR +  +A+  +P   + W K   +E         R+V+ + +E  P   + W + +
Sbjct:   172 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWQPEE-QAWHSYI 230

Query:   618 ELE----DPEDARILLSRAVECCPTSVELWLALARLET----YENARKVLNKARE---NI 666
               E    + + AR +  R V   P  V+ W+  AR E     + +ARKV  +A E   + 
Sbjct:   231 NFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHGYFAHARKVYERAVEFFGDE 289

Query:   667 PTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKE-AIEAEKAGSV 725
               D  ++   AK EE       V  I   AL  +S        +  FK   I  +K G  
Sbjct:   290 HMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQ----EAQELFKNYTIFEKKFGDR 345

Query:   726 HTCQALIRAIIGYGVEQEDRKH-----TWMEDAESCANQGAYECARAIYAQALATFP--S 778
                + +I +   +  E+E + +      W +      +    E  R +Y +A+A  P   
Sbjct:   346 RGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAIANVPPIQ 405

Query:   779 KKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKN 838
             +K  W R  Y   N+   E LE    +      ++ +  +   K     +WL  A FE  
Sbjct:   406 EKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIR 465

Query:   839 HGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWL 898
                       L  ++  CPK++ L+    + +    +    R +     +  P +   W+
Sbjct:   466 QKNLPFARRALGTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWI 524

Query:   899 AAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXX 958
                +LE+   + E                   P  E +W + +  E E  E E       
Sbjct:   525 KFAELETILGDIERARAIYELAISQPRLDM--P--EVLWKSYIDFEIEQEETERTRNLYR 580

Query:   959 XXXXSAPTPRVMIQSAKLEWCL---DNLERALQLLDEAIK 995
                      +V I  A+ E       +L +  Q+ +EA K
Sbjct:   581 RLLQRTQHVKVWISFAQFELSSRKEGSLAKCRQIYEEANK 620

 Score = 140 (54.3 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
 Identities = 58/229 (25%), Positives = 102/229 (44%)

Query:   493 DINDIK--KARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSED 550
             ++ND K  K +    ++R+ N      WI  A+ EE   ++Q AR++  +  + +  +  
Sbjct:    99 ELNDYKLRKRKTFEDNIRK-NRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNIT 157

Query:   551 LWLEAARLQ----PVDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKAL 603
             LWL+ A ++     V+ AR +  +A+  +P   + W K   +E         R+V+ + +
Sbjct:   158 LWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWM 217

Query:   604 EHIPNSVRLWKAAVELE----DPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             E  P   + W + +  E    + + AR +  R V   P  V+ W+  AR E     + +A
Sbjct:   218 EWQPEE-QAWHSYINFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHGYFAHA 275

Query:   656 RKVLNKARE---NIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLS 701
             RKV  +A E   +   D  ++   AK EE       V  I   AL  +S
Sbjct:   276 RKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIS 324

 Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 93/509 (18%), Positives = 191/509 (37%)

Query:   600 RKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             RK    I N ++  +    L++ + AR +  RA++    ++ LWL  A +E       +A
Sbjct:   116 RKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHA 175

Query:   656 RKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALS---SLSANGVEINREHW 712
             R + ++A   +P   Q W     +EE  GN A   ++ +R +       A    IN E  
Sbjct:   176 RNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWQPEEQAWHSYINFELR 235

Query:   713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQA 772
             +KE    ++A +++    L+           D K+ W++ A      G +  AR +Y +A
Sbjct:   236 YKEV---DRARTIYERFVLVHP---------DVKN-WIKYARFEEKHGYFAHARKVYERA 282

Query:   773 LATFPSK---KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIW 829
             +  F  +   + +++  A FE+N    E +  + + A+    K E           + ++
Sbjct:   283 VEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEA----------QELF 332

Query:   830 LRAAYFEKNHGTRESLETLL--------QKAVAHCPKSEVLWLMGAKSKWLAGDVPAARG 881
                  FEK  G R  +E ++        ++ V   P +   W    +      +    R 
Sbjct:   333 KNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVRE 392

Query:   882 ILSLAFQANPNSEEI--WLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN--PNSE--- 934
             +   A    P  +E   W   + L      YE                     P+ +   
Sbjct:   393 VYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTF 452

Query:   935 -EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEA 993
              ++WL   + E                    P  ++     +LE  L   +R  +L ++ 
Sbjct:   453 AKMWLLYAQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKF 512

Query:   994 IKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKML 1051
             ++  P+    W+   ++E     +++A   +  AI +    +P  LW    + E  ++  
Sbjct:   513 LEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEET 572

Query:  1052 IKARSVLEKGRLRNPNCAELWLAAIRVEI 1080
              + R++  +  L+     ++W++  + E+
Sbjct:   573 ERTRNLYRR-LLQRTQHVKVWISFAQFEL 600

 Score = 101 (40.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
 Identities = 49/210 (23%), Positives = 90/210 (42%)

Query:   984 ERALQLLDEAIKVFPD----FAKLWMMKGQIE-EQKNLLDKAHDTFSQAIKKCPHSVPLW 1038
             ER  Q+   ++++ P     FAK+W++  Q E  QKNL   A      +I KCP +  L+
Sbjct:   432 ERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNL-PFARRALGTSIGKCPKN-KLF 489

Query:  1039 IMLANLEERRKMLIKARSVLEKGRLRNP-NCAELWLAAIRVEIRAGLKDIANTMMAKALQ 1097
                  LE + +   + R + EK     P NC   W+    +E   G  + A  +   A+ 
Sbjct:   490 KGYIELELQLREFDRCRKLYEKFLEFGPENCTS-WIKFAELETILGDIERARAIYELAIS 548

Query:  1098 ECPNAG---ILWAEAIFLEPRPQRKTKSVDALKKC-EHDPHVLLAVSKLFWCENKNQKCH 1153
             + P      +LW   I  E   +   ++ +  ++  +   HV + +S   + E  ++K  
Sbjct:   549 Q-PRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHVKVWISFAQF-ELSSRK-- 604

Query:  1154 RSGS-RRCMGVKTKSVDALKKCEHDPHVLL 1182
               GS  +C  +  ++   ++ CE     L+
Sbjct:   605 -EGSLAKCRQIYEEANKTMRNCEEKEERLM 633

 Score = 51 (23.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
 Identities = 28/145 (19%), Positives = 63/145 (43%)

Query:  1105 LWAE-AIF--LEPRPQRKTKSVDALKKCEHDPHVLLAVSK--LFWCENKNQKCHRSGSRR 1159
             LW   A++  LE +   +T+ V      E  PH     +K  L + + + ++ +   +RR
Sbjct:   416 LWVNYALYEELEAKDPERTRQVYQAS-LELIPHKKFTFAKMWLLYAQFEIRQKNLPFARR 474

Query:  1160 CMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFY 1219
              +G       ++ KC  +  +     +L     +  +CR+ + + ++  P+   +W  F 
Sbjct:   475 ALGT------SIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFA 527

Query:  1220 KFEIINGTEETQAEVKKRCLAAEPK 1244
             + E I G  E    + +  ++ +P+
Sbjct:   528 ELETILGDIERARAIYELAIS-QPR 551


>MGI|MGI:1914127 [details] [associations]
            symbol:Crnkl1 "Crn, crooked neck-like 1 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000245 "spliceosomal complex
            assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISO]
            [GO:0006396 "RNA processing" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
            InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
            Pfam:PF02184 SMART:SM00386 MGI:MGI:1914127 GO:GO:0016607
            GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.10 GO:GO:0000245
            eggNOG:NOG327505 KO:K12869 HOGENOM:HOG000207972 OMA:KFTFAKI
            GeneTree:ENSGT00550000074931 CTD:51340 HOVERGEN:HBG051046
            EMBL:AK004749 EMBL:AK012962 EMBL:AK088882 EMBL:BC029187
            IPI:IPI00132376 RefSeq:NP_080096.1 UniGene:Mm.248755
            ProteinModelPortal:P63154 SMR:P63154 STRING:P63154
            PhosphoSite:P63154 PaxDb:P63154 PRIDE:P63154
            Ensembl:ENSMUST00000001818 GeneID:66877 KEGG:mmu:66877
            InParanoid:P63154 OrthoDB:EOG4SJ5DC ChiTaRS:CRNKL1 NextBio:322905
            Bgee:P63154 CleanEx:MM_CRNKL1 Genevestigator:P63154
            GermOnline:ENSMUSG00000001767 Uniprot:P63154
        Length = 690

 Score = 158 (60.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
 Identities = 95/460 (20%), Positives = 169/460 (36%)

Query:   561 VDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAV 617
             V+ AR +  +A+  +P   + W K   +E         R+V+ + +E  P   + W + +
Sbjct:   131 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE-QAWHSYI 189

Query:   618 ELE----DPEDARILLSRAVECCPTSVELWLALARLET----YENARKVLNKARE---NI 666
               E    + E AR +  R V   P +V+ W+  AR E     + +ARKV  +A E   + 
Sbjct:   190 NFELRYKEVERARTIYERFVLVHP-AVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDE 248

Query:   667 PTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKE-AIEAEKAGSV 725
               D  ++   AK EE       V  I   AL  +S        +  FK   I  +K G  
Sbjct:   249 HMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQ----EAQELFKNYTIFEKKFGDR 304

Query:   726 HTCQALIRAIIGYGVEQEDRKH-----TWMEDAESCANQGAYECARAIYAQALATFP--S 778
                + +I +   +  E+E + +      W +      +    +  R +Y +A+A  P   
Sbjct:   305 RGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQ 364

Query:   779 KKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKN 838
             +K  W R  Y   N+   E LE    +      ++ +  +   K     +WL  A FE  
Sbjct:   365 EKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIR 424

Query:   839 HGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWL 898
                       L  ++  CPK++ L+    + +    +    R +     +  P +   W+
Sbjct:   425 QKNLPFARRALGTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWI 483

Query:   899 AAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXX 958
                +LE+   + E                   P  E +W + +  E E  E E       
Sbjct:   484 KFAELETILGDIERARAIYELAISQPRLDM--P--EVLWKSYIDFEIEQEETERTRNLYR 539

Query:   959 XXXXSAPTPRVMIQSAKLEWCLD---NLERALQLLDEAIK 995
                      +V I  A+ E       ++ +  Q+ +EA K
Sbjct:   540 QLLQRTQHVKVWISFAQFELSSGKEGSVAKCRQIYEEANK 579

 Score = 145 (56.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
 Identities = 59/229 (25%), Positives = 103/229 (44%)

Query:   493 DINDIK--KARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSED 550
             ++ND K  K +    ++R+ N      WI  A+ EE   ++Q AR++  +  + +  +  
Sbjct:    58 ELNDYKLRKRKTFEDNIRK-NRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNIT 116

Query:   551 LWLEAARLQ----PVDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKAL 603
             LWL+ A ++     V+ AR +  +A+  +P   + W K   +E         R+V+ + +
Sbjct:   117 LWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWM 176

Query:   604 EHIPNSVRLWKAAVELE----DPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             E  P   + W + +  E    + E AR +  R V   P +V+ W+  AR E     + +A
Sbjct:   177 EWQPEE-QAWHSYINFELRYKEVERARTIYERFVLVHP-AVKNWIKYARFEEKHAYFAHA 234

Query:   656 RKVLNKARE---NIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLS 701
             RKV  +A E   +   D  ++   AK EE       V  I   AL  +S
Sbjct:   235 RKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIS 283

 Score = 138 (53.6 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 93/512 (18%), Positives = 190/512 (37%)

Query:   600 RKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             RK    I N ++  +    L++ + AR +  RA++    ++ LWL  A +E       +A
Sbjct:    75 RKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHA 134

Query:   656 RKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALS---SLSANGVEINREHW 712
             R + ++A   +P   Q W     +EE  GN A   ++ +R +       A    IN E  
Sbjct:   135 RNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 194

Query:   713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQA 772
             +KE    E+A +++    L+   +            W++ A        +  AR +Y +A
Sbjct:   195 YKEV---ERARTIYERFVLVHPAV----------KNWIKYARFEEKHAYFAHARKVYERA 241

Query:   773 LATFPSK---KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIW 829
             +  F  +   + +++  A FE+N    E +  + + A+    K E           + ++
Sbjct:   242 VEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEA----------QELF 291

Query:   830 LRAAYFEKNHGTRESLETLL--------QKAVAHCPKSEVLWLMGAKSKWLAGDVPAARG 881
                  FEK  G R  +E ++        ++ V   P +   W    +      +    R 
Sbjct:   292 KNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVRE 351

Query:   882 ILSLAFQANPNSEEI--WLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN--PNSE--- 934
             +   A    P  +E   W   + L      YE                     P+ +   
Sbjct:   352 VYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTF 411

Query:   935 -EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEA 993
              ++WL   + E                    P  ++     +LE  L   +R  +L ++ 
Sbjct:   412 AKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKF 471

Query:   994 IKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKML 1051
             ++  P+    W+   ++E     +++A   +  AI +    +P  LW    + E  ++  
Sbjct:   472 LEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEET 531

Query:  1052 IKARSVLEKGRLRNPNCAELWLAAIRVEIRAG 1083
              + R+ L +  L+     ++W++  + E+ +G
Sbjct:   532 ERTRN-LYRQLLQRTQHVKVWISFAQFELSSG 562

 Score = 94 (38.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
 Identities = 49/210 (23%), Positives = 88/210 (41%)

Query:   984 ERALQLLDEAIKVFPD----FAKLWMMKGQIE-EQKNLLDKAHDTFSQAIKKCPHSVPLW 1038
             ER  Q+   ++++ P     FAK+W+   Q E  QKNL   A      +I KCP +  L+
Sbjct:   391 ERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNL-PFARRALGTSIGKCPKN-KLF 448

Query:  1039 IMLANLEERRKMLIKARSVLEKGRLRNP-NCAELWLAAIRVEIRAGLKDIANTMMAKALQ 1097
                  LE + +   + R + EK     P NC   W+    +E   G  + A  +   A+ 
Sbjct:   449 KGYIELELQLREFDRCRKLYEKFLEFGPENCTS-WIKFAELETILGDIERARAIYELAIS 507

Query:  1098 ECPNAG---ILWAEAIFLEPRPQRKTKSVDALKKC-EHDPHVLLAVSKLFWCENKNQKCH 1153
             + P      +LW   I  E   +   ++ +  ++  +   HV + +S   + E  + K  
Sbjct:   508 Q-PRLDMPEVLWKSYIDFEIEQEETERTRNLYRQLLQRTQHVKVWISFAQF-ELSSGK-- 563

Query:  1154 RSGS-RRCMGVKTKSVDALKKCEHDPHVLL 1182
               GS  +C  +  ++   ++ CE     L+
Sbjct:   564 -EGSVAKCRQIYEEANKTMRNCEEKEERLM 592

 Score = 54 (24.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
 Identities = 28/145 (19%), Positives = 64/145 (44%)

Query:  1105 LWAE-AIF--LEPRPQRKTKSVDALKKCEHDPHVLLAVSK--LFWCENKNQKCHRSGSRR 1159
             LW   A++  LE +   +T+ V      E  PH     +K  L++ + + ++ +   +RR
Sbjct:   375 LWVNYALYEELEAKDPERTRQVYQAS-LELIPHKKFTFAKMWLYYAQFEIRQKNLPFARR 433

Query:  1160 CMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFY 1219
              +G       ++ KC  +  +     +L     +  +CR+ + + ++  P+   +W  F 
Sbjct:   434 ALGT------SIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFA 486

Query:  1220 KFEIINGTEETQAEVKKRCLAAEPK 1244
             + E I G  E    + +  ++ +P+
Sbjct:   487 ELETILGDIERARAIYELAIS-QPR 510

 Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query:  1215 WAYFYKFEIINGTEETQAEVKK 1236
             W  F +FE+ +G E + A+ ++
Sbjct:   551 WISFAQFELSSGKEGSVAKCRQ 572


>RGD|620507 [details] [associations]
            symbol:Crnkl1 "crooked neck pre-mRNA splicing factor-like 1
            (Drosophila)" species:10116 "Rattus norvegicus" [GO:0000245
            "spliceosomal complex assembly" evidence=ISO;ISS] [GO:0003723 "RNA
            binding" evidence=ISO;ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISO;ISS] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA;ISO] InterPro:IPR003107 InterPro:IPR011990
            InterPro:IPR013026 Pfam:PF02184 SMART:SM00386 RGD:620507
            GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.10 GO:GO:0071013
            GO:GO:0000245 eggNOG:NOG327505 KO:K12869 HOGENOM:HOG000207972
            GeneTree:ENSGT00550000074931 CTD:51340 HOVERGEN:HBG051046
            OrthoDB:EOG4SJ5DC EMBL:AF245018 EMBL:BC085718 IPI:IPI00327482
            RefSeq:NP_446249.1 RefSeq:XP_003749628.1 UniGene:Rn.162694
            ProteinModelPortal:P63155 SMR:P63155 STRING:P63155 PRIDE:P63155
            Ensembl:ENSRNOT00000014632 GeneID:100910202 GeneID:116481
            KEGG:rno:100910202 KEGG:rno:116481 UCSC:RGD:620507
            InParanoid:P63155 NextBio:619051 Genevestigator:P63155
            GermOnline:ENSRNOG00000040045 Uniprot:P63155
        Length = 690

 Score = 158 (60.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
 Identities = 95/460 (20%), Positives = 169/460 (36%)

Query:   561 VDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAV 617
             V+ AR +  +A+  +P   + W K   +E         R+V+ + +E  P   + W + +
Sbjct:   131 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE-QAWHSYI 189

Query:   618 ELE----DPEDARILLSRAVECCPTSVELWLALARLET----YENARKVLNKARE---NI 666
               E    + E AR +  R V   P +V+ W+  AR E     + +ARKV  +A E   + 
Sbjct:   190 NFELRYKEVERARTIYERFVLVHP-AVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDE 248

Query:   667 PTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKE-AIEAEKAGSV 725
               D  ++   AK EE       V  I   AL  +S        +  FK   I  +K G  
Sbjct:   249 HMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQ----EAQELFKNYTIFEKKFGDR 304

Query:   726 HTCQALIRAIIGYGVEQEDRKH-----TWMEDAESCANQGAYECARAIYAQALATFP--S 778
                + +I +   +  E+E + +      W +      +    +  R +Y +A+A  P   
Sbjct:   305 RGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQ 364

Query:   779 KKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKN 838
             +K  W R  Y   N+   E LE    +      ++ +  +   K     +WL  A FE  
Sbjct:   365 EKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIR 424

Query:   839 HGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWL 898
                       L  ++  CPK++ L+    + +    +    R +     +  P +   W+
Sbjct:   425 QKNLPFARRALGTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWI 483

Query:   899 AAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXX 958
                +LE+   + E                   P  E +W + +  E E  E E       
Sbjct:   484 KFAELETILGDIERARAIYELAISQPRLDM--P--EVLWKSYIDFEIEQEETERTRNLYR 539

Query:   959 XXXXSAPTPRVMIQSAKLEWCLD---NLERALQLLDEAIK 995
                      +V I  A+ E       ++ +  Q+ +EA K
Sbjct:   540 QLLQRTQHVKVWISFAQFELSSGKEGSVAKCRQIYEEANK 579

 Score = 145 (56.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
 Identities = 59/229 (25%), Positives = 103/229 (44%)

Query:   493 DINDIK--KARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSED 550
             ++ND K  K +    ++R+ N      WI  A+ EE   ++Q AR++  +  + +  +  
Sbjct:    58 ELNDYKLRKRKTFEDNIRK-NRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNIT 116

Query:   551 LWLEAARLQ----PVDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKAL 603
             LWL+ A ++     V+ AR +  +A+  +P   + W K   +E         R+V+ + +
Sbjct:   117 LWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWM 176

Query:   604 EHIPNSVRLWKAAVELE----DPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             E  P   + W + +  E    + E AR +  R V   P +V+ W+  AR E     + +A
Sbjct:   177 EWQPEE-QAWHSYINFELRYKEVERARTIYERFVLVHP-AVKNWIKYARFEEKHAYFAHA 234

Query:   656 RKVLNKARE---NIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLS 701
             RKV  +A E   +   D  ++   AK EE       V  I   AL  +S
Sbjct:   235 RKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIS 283

 Score = 138 (53.6 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 93/512 (18%), Positives = 190/512 (37%)

Query:   600 RKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             RK    I N ++  +    L++ + AR +  RA++    ++ LWL  A +E       +A
Sbjct:    75 RKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHA 134

Query:   656 RKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALS---SLSANGVEINREHW 712
             R + ++A   +P   Q W     +EE  GN A   ++ +R +       A    IN E  
Sbjct:   135 RNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELR 194

Query:   713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQA 772
             +KE    E+A +++    L+   +            W++ A        +  AR +Y +A
Sbjct:   195 YKEV---ERARTIYERFVLVHPAV----------KNWIKYARFEEKHAYFAHARKVYERA 241

Query:   773 LATFPSK---KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIW 829
             +  F  +   + +++  A FE+N    E +  + + A+    K E           + ++
Sbjct:   242 VEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEA----------QELF 291

Query:   830 LRAAYFEKNHGTRESLETLL--------QKAVAHCPKSEVLWLMGAKSKWLAGDVPAARG 881
                  FEK  G R  +E ++        ++ V   P +   W    +      +    R 
Sbjct:   292 KNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVRE 351

Query:   882 ILSLAFQANPNSEEI--WLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN--PNSE--- 934
             +   A    P  +E   W   + L      YE                     P+ +   
Sbjct:   352 VYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTF 411

Query:   935 -EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEA 993
              ++WL   + E                    P  ++     +LE  L   +R  +L ++ 
Sbjct:   412 AKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKF 471

Query:   994 IKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKML 1051
             ++  P+    W+   ++E     +++A   +  AI +    +P  LW    + E  ++  
Sbjct:   472 LEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEET 531

Query:  1052 IKARSVLEKGRLRNPNCAELWLAAIRVEIRAG 1083
              + R+ L +  L+     ++W++  + E+ +G
Sbjct:   532 ERTRN-LYRQLLQRTQHVKVWISFAQFELSSG 562

 Score = 94 (38.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
 Identities = 49/210 (23%), Positives = 88/210 (41%)

Query:   984 ERALQLLDEAIKVFPD----FAKLWMMKGQIE-EQKNLLDKAHDTFSQAIKKCPHSVPLW 1038
             ER  Q+   ++++ P     FAK+W+   Q E  QKNL   A      +I KCP +  L+
Sbjct:   391 ERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNL-PFARRALGTSIGKCPKN-KLF 448

Query:  1039 IMLANLEERRKMLIKARSVLEKGRLRNP-NCAELWLAAIRVEIRAGLKDIANTMMAKALQ 1097
                  LE + +   + R + EK     P NC   W+    +E   G  + A  +   A+ 
Sbjct:   449 KGYIELELQLREFDRCRKLYEKFLEFGPENCTS-WIKFAELETILGDIERARAIYELAIS 507

Query:  1098 ECPNAG---ILWAEAIFLEPRPQRKTKSVDALKKC-EHDPHVLLAVSKLFWCENKNQKCH 1153
             + P      +LW   I  E   +   ++ +  ++  +   HV + +S   + E  + K  
Sbjct:   508 Q-PRLDMPEVLWKSYIDFEIEQEETERTRNLYRQLLQRTQHVKVWISFAQF-ELSSGK-- 563

Query:  1154 RSGS-RRCMGVKTKSVDALKKCEHDPHVLL 1182
               GS  +C  +  ++   ++ CE     L+
Sbjct:   564 -EGSVAKCRQIYEEANKTMRNCEEKEERLM 592

 Score = 54 (24.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
 Identities = 28/145 (19%), Positives = 64/145 (44%)

Query:  1105 LWAE-AIF--LEPRPQRKTKSVDALKKCEHDPHVLLAVSK--LFWCENKNQKCHRSGSRR 1159
             LW   A++  LE +   +T+ V      E  PH     +K  L++ + + ++ +   +RR
Sbjct:   375 LWVNYALYEELEAKDPERTRQVYQAS-LELIPHKKFTFAKMWLYYAQFEIRQKNLPFARR 433

Query:  1160 CMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFY 1219
              +G       ++ KC  +  +     +L     +  +CR+ + + ++  P+   +W  F 
Sbjct:   434 ALGT------SIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFA 486

Query:  1220 KFEIINGTEETQAEVKKRCLAAEPK 1244
             + E I G  E    + +  ++ +P+
Sbjct:   487 ELETILGDIERARAIYELAIS-QPR 510

 Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query:  1215 WAYFYKFEIINGTEETQAEVKK 1236
             W  F +FE+ +G E + A+ ++
Sbjct:   551 WISFAQFELSSGKEGSVAKCRQ 572


>TAIR|locus:2086132 [details] [associations]
            symbol:HCF107 "high chlorophyll fluorescent 107"
            species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA;IMP]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0006417 "regulation
            of translation" evidence=RCA;IMP] [GO:0009657 "plastid
            organization" evidence=RCA;IMP] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=RCA] [GO:0009902
            "chloroplast relocation" evidence=RCA] [GO:0009965 "leaf
            morphogenesis" evidence=RCA] [GO:0010027 "thylakoid membrane
            organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
            evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
            [GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
            "regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
            "transcription from plastid promoter" evidence=RCA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=RCA]
            InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
            SMART:SM00386 GO:GO:0005774 EMBL:CP002686 GO:GO:0006417
            GO:GO:0009941 GO:GO:0006396 GO:GO:0009657 Gene3D:1.25.40.10
            InterPro:IPR013105 Pfam:PF07719 EMBL:AY093112 EMBL:BT008405
            IPI:IPI00517465 RefSeq:NP_188329.1 UniGene:At.22706
            ProteinModelPortal:Q8RWG2 SMR:Q8RWG2 STRING:Q8RWG2 PaxDb:Q8RWG2
            PRIDE:Q8RWG2 EnsemblPlants:AT3G17040.1 GeneID:820961
            KEGG:ath:AT3G17040 TAIR:At3g17040 eggNOG:NOG300398
            InParanoid:Q8RWG2 OMA:MEWKEGN PhylomeDB:Q8RWG2
            ProtClustDB:CLSN2684191 ArrayExpress:Q8RWG2 Genevestigator:Q8RWG2
            Uniprot:Q8RWG2
        Length = 652

 Score = 186 (70.5 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 78/293 (26%), Positives = 126/293 (43%)

Query:   494 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKG---CEENQ-TSE 549
             + ++++AR L  +    +  H  AW   A LE   G +  ARNL+ KG   C  N+   +
Sbjct:   250 LGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCGRNEYIYQ 309

Query:   550 DLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETK---AKRRVYRKALEHI 606
              L L  A+    + AR +  QA      S   W+  A LE + +   A R+++ KA++  
Sbjct:   310 TLALLEAKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLFEKAVQAS 369

Query:   607 PNSVRLWKAAVELE----DPEDARILLSRAVECCPTSVELWLALARLETYEN-----ARK 657
             P +   W      E    + E  R LL       P    L  +L  LE Y++     AR 
Sbjct:   370 PKNRFAWHVWGVFEAGVGNVERGRKLLKIGHALNPRDPVLLQSLGLLE-YKHSSANLARA 428

Query:   658 VLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINR--EHWFKE 715
             +L +A E  P  + +W     +E   GN     ++  RALS + AN    +R  + W   
Sbjct:   429 LLRRASELDPRHQPVWIAWGWMEWKEGNTTTARELYQRALS-IDANTESASRCLQAW--- 484

Query:   716 AIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAI 768
              +  ++AG++   + L R+ +    +      TWM  A+   +QG  E A  I
Sbjct:   485 GVLEQRAGNLSAARRLFRSSLNINSQSYV---TWMTWAQLEEDQGDTERAEEI 534

 Score = 140 (54.3 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 87/350 (24%), Positives = 139/350 (39%)

Query:   498 KKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSED-LW---- 552
             K A  +L+      P     ++A  ++     K+  AR L  KGC+  Q     +W    
Sbjct:   185 KDAEKILEKCIAYWPEDGRPYVALGKILSKQSKLAEARILYEKGCQSTQGENSYIWQCWA 244

Query:   553 -LEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETE----TKAKRRVYRKALEHIP 607
              LE  RL  V  AR +   A       V  W   A+LE +    +KA R +  K L+   
Sbjct:   245 VLEN-RLGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKA-RNLLAKGLKFCG 302

Query:   608 NSVRLWKAAVELEDP----EDARILLSRAVECCPTSVELWLALARLET----YENARKVL 659
              +  +++    LE      E AR L  +A  C   S   WLA A+LE     Y  ARK+ 
Sbjct:   303 RNEYIYQTLALLEAKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLF 362

Query:   660 NKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEA 719
              KA +  P +R  W      E   GN       ++R    L   G  +N     ++ +  
Sbjct:   363 EKAVQASPKNRFAWHVWGVFEAGVGN-------VERGRKLLKI-GHALNP----RDPVLL 410

Query:   720 EKAGSV---HTCQALIRAIIGYGVEQEDRKH-TWMEDAESCANQGAYECARAIYAQALAT 775
             +  G +   H+   L RA++    E + R    W+        +G    AR +Y +AL+ 
Sbjct:   411 QSLGLLEYKHSSANLARALLRRASELDPRHQPVWIAWGWMEWKEGNTTTARELYQRALSI 470

Query:   776 FPSKKSI--WLRA-AYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAK 822
               + +S    L+A    E+  G   +   L + ++    +S V W+  A+
Sbjct:   471 DANTESASRCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTWMTWAQ 520

 Score = 128 (50.1 bits), Expect = 0.00028, P = 0.00028
 Identities = 60/247 (24%), Positives = 101/247 (40%)

Query:   974 AKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPH 1033
             A LE  L N+ RA +L D A          W     +E ++  + KA +  ++ +K C  
Sbjct:   244 AVLENRLGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCGR 303

Query:  1034 SVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMA 1093
             +  ++  LA LE +     +AR + ++  + N      WLA  ++EI+      A  +  
Sbjct:   304 NEYIYQTLALLEAKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLFE 363

Query:  1094 KALQECPNAGILWA-----EA-IFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCEN 1147
             KA+Q  P     W      EA +    R ++  K   AL     DP +L ++  L   E 
Sbjct:   364 KAVQASPKNRFAWHVWGVFEAGVGNVERGRKLLKIGHALNP--RDPVLLQSLGLL---EY 418

Query:  1148 KNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKI 1207
             K+   + +   R +  +   +D      H P V +A   + W E      RE + R + I
Sbjct:   419 KHSSANLA---RALLRRASELDP----RHQP-VWIAWGWMEWKEGNTTTARELYQRALSI 470

Query:  1208 DPDLGDA 1214
             D +   A
Sbjct:   471 DANTESA 477


>TAIR|locus:2152965 [details] [associations]
            symbol:AT5G41770 species:3702 "Arabidopsis thaliana"
            [GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA;ISS]
            InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
            Pfam:PF02184 PROSITE:PS50293 SMART:SM00386 EMBL:CP002688
            GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10 KO:K12869 OMA:KFTFAKI
            IPI:IPI00530971 RefSeq:NP_198992.2 UniGene:At.9341
            ProteinModelPortal:F4JZX8 SMR:F4JZX8 PRIDE:F4JZX8
            EnsemblPlants:AT5G41770.1 GeneID:834182 KEGG:ath:AT5G41770
            Uniprot:F4JZX8
        Length = 705

 Score = 183 (69.5 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 103/493 (20%), Positives = 185/493 (37%)

Query:   518 WIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQP----VDTARAVIAQAVR 573
             W+  A+ EE       AR++  +  E +  +  LWL+ A  +     V++AR V  +AV 
Sbjct:    95 WVKYAQWEESQKDYARARSVWERAIEGDYRNHTLWLKYAEFEMKNKFVNSARNVWDRAVT 154

Query:   574 HIPTSVRIWIKAADLET---ETKAKRRVYRKALEHIPNSVRLWKAAVELE----DPEDAR 626
              +P   ++W K   +E         R+++ + ++  P+  + W + ++ E    + E AR
Sbjct:   155 LLPRVDQLWYKYIHMEEILGNIAGARQIFERWMDWSPDQ-QGWLSFIKFELRYNEIERAR 213

Query:   627 ILLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTDRQIWTTAAKLEEA 682
              +  R V C P  V  ++  A+ E         R V  +A E +  D +         E 
Sbjct:   214 TIYERFVLCHP-KVSAYIRYAKFEMKGGEVARCRSVYERATEKLADDEEAEILFVAFAEF 272

Query:   683 HGNNAMVDKIIDRALSSLSANGVEINR-EHWFKEAIEAEKAGSVHTCQALIRAIIG---Y 738
                   V++   R +   + + +   R E  +++ +  EK       + +  AI+G   +
Sbjct:   273 EERCKEVERA--RFIYKFALDHIPKGRAEDLYRKFVAFEK--QYGDKEGIEDAIVGKRRF 328

Query:   739 GVEQEDRKH-----TWMEDAESCANQGAYECARAIYAQALATFP--SKKSIWLRAAYFEK 791
               E E RK      +W +      + G  +  R IY +A+A  P   +K  W R  Y   
Sbjct:   329 QYEDEVRKSPSNYDSWFDYVRLEESVGNKDRIREIYERAIANVPPAEEKRYWQRYIYLWI 388

Query:   792 NHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQK 851
             N+   E +ET   +      +  +  +  +K +   IWL AA FE           +L  
Sbjct:   389 NYALFEEIETEDIERTRDVYRECLKLIPHSKFSFAKIWLLAAQFEIRQLNLTGARQILGN 448

Query:   852 AVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYE 911
             A+   PK ++ +    + +   G++   R +     + +P +   W    +LE    E E
Sbjct:   449 AIGKAPKDKI-FKKYIEIELQLGNMDRCRKLYERYLEWSPENCYAWSKYAELERSLVETE 507

Query:   912 XXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMI 971
                                P  E +W A +  E    E E                +V +
Sbjct:   508 RARAIFELAISQPALDM--P--ELLWKAYIDFEISEGELERTRALYERLLDRTKHYKVWV 563

Query:   972 QSAKLEWCLDNLE 984
               AK E     LE
Sbjct:   564 SFAKFEASAAELE 576

 Score = 156 (60.0 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 82/360 (22%), Positives = 147/360 (40%)

Query:   572 VRHIPTSVRIWIKAADLETETK--AKRR-VYRKALEHIPNSVRLWKAAVELEDPE----D 624
             +R    ++++W+K A  E   K  A+ R V+ +A+E    +  LW    E E        
Sbjct:    85 IRRARWNIQVWVKYAQWEESQKDYARARSVWERAIEGDYRNHTLWLKYAEFEMKNKFVNS 144

Query:   625 ARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIWTTAAKLE 680
             AR +  RAV   P   +LW     +E        AR++  +  +  P D+Q W +  K E
Sbjct:   145 ARNVWDRAVTLLPRVDQLWYKYIHMEEILGNIAGARQIFERWMDWSP-DQQGWLSFIKFE 203

Query:   681 EAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGV 740
               +        I +R +  L    V      + + A    K G V  C+++         
Sbjct:   204 LRYNEIERARTIYERFV--LCHPKVSA----YIRYAKFEMKGGEVARCRSVYERATEKLA 257

Query:   741 EQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKS--IWLRAAYFEKNHGTRES 798
             + E+ +  ++  AE        E AR IY  AL   P  ++  ++ +   FEK +G +E 
Sbjct:   258 DDEEAEILFVAFAEFEERCKEVERARFIYKFALDHIPKGRAEDLYRKFVAFEKQYGDKEG 317

Query:   799 LETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPK 858
             +E  +        + EV     + SN  S W      E++ G ++ +  + ++A+A+ P 
Sbjct:   318 IEDAIVGKRRFQYEDEV---RKSPSNYDS-WFDYVRLEESVGNKDRIREIYERAIANVPP 373

Query:   859 SE---------VLWLMGAKSKWL-AGDVPAARGILSLAFQANPNSE----EIWLAAVKLE 904
             +E          LW+  A  + +   D+   R +     +  P+S+    +IWL A + E
Sbjct:   374 AEEKRYWQRYIYLWINYALFEEIETEDIERTRDVYRECLKLIPHSKFSFAKIWLLAAQFE 433

 Score = 150 (57.9 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 106/519 (20%), Positives = 195/519 (37%)

Query:   595 KRRVYRKALEHIPNSVRLW-KAAVELEDPED---ARILLSRAVECCPTSVELWLALARLE 650
             +R+ +   +     ++++W K A   E  +D   AR +  RA+E    +  LWL  A  E
Sbjct:    77 RRKEFEDQIRRARWNIQVWVKYAQWEESQKDYARARSVWERAIEGDYRNHTLWLKYAEFE 136

Query:   651 T----YENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALS-SLSANGV 705
                    +AR V ++A   +P   Q+W     +EE  GN A   +I +R +  S    G 
Sbjct:   137 MKNKFVNSARNVWDRAVTLLPRVDQLWYKYIHMEEILGNIAGARQIFERWMDWSPDQQGW 196

Query:   706 EINREHWFKEAIEAEKAGSVHT----CQALIRAIIGYGVEQEDRKHTWMEDAESCANQGA 761
              ++   +     E E+A +++     C   + A I Y   +       M+  E    +  
Sbjct:   197 -LSFIKFELRYNEIERARTIYERFVLCHPKVSAYIRYAKFE-------MKGGEVARCRSV 248

Query:   762 YECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGA 821
             YE  RA   + LA     + +++  A FE+     E    + + A+ H PK         
Sbjct:   249 YE--RA--TEKLADDEEAEILFVAFAEFEERCKEVERARFIYKFALDHIPKGRA------ 298

Query:   822 KSNKKSIWLRAAYFEKNHGTRESLETLL--------QKAVAHCPKSEVLWLMGAKSKWLA 873
                 + ++ +   FEK +G +E +E  +        +  V   P +   W    + +   
Sbjct:   299 ----EDLYRKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKSPSNYDSWFDYVRLEESV 354

Query:   874 GDVPAARGILSLAFQANPNSEE--IWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN- 930
             G+    R I   A    P +EE   W   + L      +E                    
Sbjct:   355 GNKDRIREIYERAIANVPPAEEKRYWQRYIYLWINYALFEEIETEDIERTRDVYRECLKL 414

Query:   931 -PNSE----EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLER 985
              P+S+    +IWL A + E                   AP  ++  +  ++E  L N++R
Sbjct:   415 IPHSKFSFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLGNMDR 474

Query:   986 ALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLAN 1043
               +L +  ++  P+    W    ++E      ++A   F  AI +    +P  LW    +
Sbjct:   475 CRKLYERYLEWSPENCYAWSKYAELERSLVETERARAIFELAISQPALDMPELLWKAYID 534

Query:  1044 LEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRA 1082
              E     L + R++ E+  L      ++W++  + E  A
Sbjct:   535 FEISEGELERTRALYER-LLDRTKHYKVWVSFAKFEASA 572

 Score = 133 (51.9 bits), Expect = 9.1e-05, P = 9.1e-05
 Identities = 81/433 (18%), Positives = 172/433 (39%)

Query:   828 IWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAF 887
             +W++ A +E++        ++ ++A+    ++  LWL  A+ +     V +AR +   A 
Sbjct:    94 VWVKYAQWEESQKDYARARSVWERAIEGDYRNHTLWLKYAEFEMKNKFVNSARNVWDRAV 153

Query:   888 QANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESEN 947
                P  +++W   + +E      E                  +P+ +  WL+ +K E   
Sbjct:   154 TLLPRVDQLWYKYIHME------EILGNIAGARQIFERWMDWSPDQQG-WLSFIKFELRY 206

Query:   948 NEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAK---LW 1004
             NE E             P     I+ AK E     + R   + + A +   D  +   L+
Sbjct:   207 NEIERARTIYERFVLCHPKVSAYIRYAKFEMKGGEVARCRSVYERATEKLADDEEAEILF 266

Query:  1005 MMKGQIEEQKNLLDKAHDTFSQAIKKCP--HSVPLWIMLANLEER-------RKMLI-KA 1054
             +   + EE+   +++A   +  A+   P   +  L+      E++          ++ K 
Sbjct:   267 VAFAEFEERCKEVERARFIYKFALDHIPKGRAEDLYRKFVAFEKQYGDKEGIEDAIVGKR 326

Query:  1055 RSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAG---------IL 1105
             R   E    ++P+  + W   +R+E   G KD    +  +A+   P A           L
Sbjct:   327 RFQYEDEVRKSPSNYDSWFDYVRLEESVGNKDRIREIYERAIANVPPAEEKRYWQRYIYL 386

Query:  1106 WAE-AIFLEPRPQRKTKSVDALKKC-EHDPHVLLAVSKLFW---CENKNQKCHRSGSRRC 1160
             W   A+F E   +   ++ D  ++C +  PH   + +K+ W    + + ++ + +G+R+ 
Sbjct:   387 WINYALFEEIETEDIERTRDVYRECLKLIPHSKFSFAKI-WLLAAQFEIRQLNLTGARQI 445

Query:  1161 MGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYK 1220
             +G      +A+ K   D      +       N + +CR+ + R ++  P+   AW+ + +
Sbjct:   446 LG------NAIGKAPKDKIFKKYIEIELQLGNMD-RCRKLYERYLEWSPENCYAWSKYAE 498

Query:  1221 FE-IINGTEETQA 1232
              E  +  TE  +A
Sbjct:   499 LERSLVETERARA 511


>TAIR|locus:2121214 [details] [associations]
            symbol:BGAL14 "beta-galactosidase 14" species:3702
            "Arabidopsis thaliana" [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
            [GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
            evidence=IEA] [GO:0004565 "beta-galactosidase activity"
            evidence=ISS] [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005975 "carbohydrate
            metabolic process" evidence=IEA] [GO:0030246 "carbohydrate binding"
            evidence=IEA] [GO:0043169 "cation binding" evidence=IEA]
            InterPro:IPR000922 InterPro:IPR001944 InterPro:IPR010491
            InterPro:IPR013781 InterPro:IPR019801 Pfam:PF01301 Pfam:PF02140
            Pfam:PF06424 PRINTS:PR00742 PROSITE:PS01182 PROSITE:PS50228
            GO:GO:0005634 EMBL:CP002687 GO:GO:0043169 Gene3D:3.20.20.80
            InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0005975 GO:GO:0030246
            InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0000398 GO:GO:0004565
            PANTHER:PTHR23421 IPI:IPI00938708 RefSeq:NP_001154292.1
            UniGene:At.70242 ProteinModelPortal:F4JUE3 SMR:F4JUE3 PRIDE:F4JUE3
            EnsemblPlants:AT4G38590.2 GeneID:830016 KEGG:ath:AT4G38590
            OMA:WINGNSI ArrayExpress:F4JUE3 Uniprot:F4JUE3
        Length = 1052

 Score = 124 (48.7 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
 Identities = 28/87 (32%), Positives = 39/87 (44%)

Query:   303 GYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQF 362
             G+   LF     D  D+EAD I++ ID                          PK+  QF
Sbjct:   964 GHDAGLFANAESDDQDKEADAIWDAIDRRMDSRRKDRREAKLKQEIENYRASNPKVSGQF 1023

Query:   363 SDLKRGLVTVSMDEWKNVPEVGDARNR 389
              DL R L T+S DEW ++PE+G+  +R
Sbjct:  1024 VDLTRKLHTLSEDEWDSIPEIGNYSHR 1050

 Score = 120 (47.3 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
 Identities = 30/59 (50%), Positives = 35/59 (59%)

Query:   214 VVGQAIPPPPIPLVNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDD 272
             ++G A PP P          F  +P P  YVAG+GRGA GFTTRSDIGPAR   D + D
Sbjct:   906 LIGGAAPPQP---------RFNLMP-PSNYVAGLGRGAAGFTTRSDIGPARANGDGNAD 954

 Score = 115 (45.5 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
 Identities = 23/33 (69%), Positives = 25/33 (75%)

Query:    71 PLGYVAGVGRGATGFTTRSDIGPARDANDVSDD 103
             P  YVAG+GRGA GFTTRSDIGPAR   D + D
Sbjct:   922 PSNYVAGLGRGAAGFTTRSDIGPARANGDGNAD 954

 Score = 96 (38.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
 Identities = 24/75 (32%), Positives = 30/75 (40%)

Query:   134 GYGGSLFNKDPYDKDDEEADMIYEEIDXXXXXXXXXXXXXXXXXXXXXXXXXXPKIQQQF 193
             G+   LF     D  D+EAD I++ ID                          PK+  QF
Sbjct:   964 GHDAGLFANAESDDQDKEADAIWDAIDRRMDSRRKDRREAKLKQEIENYRASNPKVSGQF 1023

Query:   194 SDLKRGLVTVSMDEW 208
              DL R L T+S DEW
Sbjct:  1024 VDLTRKLHTLSEDEW 1038

 Score = 41 (19.5 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query:   141 NKDPYDKDDEEADMIYEEID 160
             +KD  ++DDE+ D   EE D
Sbjct:   846 DKDEEEEDDEDDDEEEEEED 865


>UNIPROTKB|F1P3Q8 [details] [associations]
            symbol:CRNKL1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000245 "spliceosomal complex assembly"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR003107
            InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293
            SMART:SM00386 GO:GO:0003723 Gene3D:1.25.40.10 GO:GO:0071013
            GO:GO:0000245 OMA:KFTFAKI GeneTree:ENSGT00550000074931
            EMBL:AADN02044253 EMBL:AADN02044254 IPI:IPI00599254
            Ensembl:ENSGALT00000013732 Uniprot:F1P3Q8
        Length = 704

 Score = 162 (62.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
 Identities = 101/515 (19%), Positives = 199/515 (38%)

Query:   600 RKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             RK    I N ++  +    L++ + AR +  RA++    +V LWL  A +E       +A
Sbjct:    91 RKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNVTLWLKYAEMEMKNRQVNHA 150

Query:   656 RKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALS---SLSANGVEINREHW 712
             R + ++A   +P   Q W     +EE  GN A   ++ +R +       A    IN E  
Sbjct:   151 RNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGSRQVFERWMEWQPEEQAWHSYINFELR 210

Query:   713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQA 772
             +KE    ++A +++   AL+  I+       D K+ W++ A        +  AR +Y +A
Sbjct:   211 YKEV---DRARTIYI--ALL-VIV-----HPDVKN-WIKYARFEEKHCYFAHARKVYERA 258

Query:   773 LATFPSK---KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIW 829
             +  F  +   + +++  A FE+N    E +  + + A+   PK +           ++++
Sbjct:   259 VEFFGEEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIPKQDA----------QNLF 308

Query:   830 LRAAYFEKNHGTRESLETLL--------QKAVAHCPKSEVLWLMGAKSKWLAGDVPAARG 881
                  FEK  G R  +E ++        ++ V   P +   W    +      D    R 
Sbjct:   309 KNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADAETVRE 368

Query:   882 ILSLAFQANPNSEE--IWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN--PNSE--- 934
             +   A    P  +E   W   + L      YE                     P+ +   
Sbjct:   369 VYERAIANVPPIQEKRYWKRYIYLWINYALYEELEAKDPERTRQVYQACIELLPHKKFTF 428

Query:   935 -EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEA 993
              +IWL   + E                    P  ++     +LE  L   +R  +L ++ 
Sbjct:   429 AKIWLLYAQFEIRQKNLPLARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKF 488

Query:   994 IKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKML 1051
             ++  P+    W+   ++E     +D+A   +  AI +    +P  LW    + E  ++  
Sbjct:   489 LEFAPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKSYIDFEIEQEEY 548

Query:  1052 IKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKD 1086
              K R++  +  L+     ++W++  + E+ AG ++
Sbjct:   549 EKTRNLYRR-LLQRTQHVKVWISFAQFELSAGKEE 582

 Score = 142 (55.0 bits), Expect = 9.8e-06, P = 9.8e-06
 Identities = 86/422 (20%), Positives = 153/422 (36%)

Query:   596 RRVYRKALEHIPNSVRLWKAAVELE----DPEDARILLSRAVECCPTSVELWLALARLET 651
             R+V+ + +E  P   + W + +  E    + + AR +    +      V+ W+  AR E 
Sbjct:   185 RQVFERWMEWQPEE-QAWHSYINFELRYKEVDRARTIYIALLVIVHPDVKNWIKYARFEE 243

Query:   652 ----YENARKVLNKARENIPT---DRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANG 704
                 + +ARKV  +A E       D  ++   AK EE       V  I   AL  +    
Sbjct:   244 KHCYFAHARKVYERAVEFFGEEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIPKQ- 302

Query:   705 VEINREHWFKE-AIEAEKAGSVHTCQALIRAIIGYGVEQEDRKH-----TWMEDAESCAN 758
                + ++ FK   I  +K G     + +I +   +  E+E + +      W +      +
Sbjct:   303 ---DAQNLFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVES 359

Query:   759 QGAYECARAIYAQALATFP--SKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVL 816
                 E  R +Y +A+A  P   +K  W R  Y   N+   E LE    +      ++ + 
Sbjct:   360 DADAETVREVYERAIANVPPIQEKRYWKRYIYLWINYALYEELEAKDPERTRQVYQACIE 419

Query:   817 WLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDV 876
              L   K     IWL  A FE            L  ++  CPK++ L+    + +    + 
Sbjct:   420 LLPHKKFTFAKIWLLYAQFEIRQKNLPLARRALGTSIGKCPKNK-LFKGYIELELQLREF 478

Query:   877 PAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEI 936
                R +     +  P +   W+   +LE+   + +                   P  E +
Sbjct:   479 DRCRKLYEKFLEFAPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDM--P--EVL 534

Query:   937 WLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCL---DNLERALQLLDEA 993
             W + +  E E  EYE                +V I  A+ E      ++L +  Q+ +EA
Sbjct:   535 WKSYIDFEIEQEEYEKTRNLYRRLLQRTQHVKVWISFAQFELSAGKEESLSKCRQIYEEA 594

Query:   994 IK 995
              K
Sbjct:   595 NK 596

 Score = 122 (48.0 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
 Identities = 45/189 (23%), Positives = 86/189 (45%)

Query:   493 DINDIK--KARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSED 550
             ++ND K  K +    ++R+ N      WI  A+ EE   ++Q AR++  +  + +  +  
Sbjct:    74 ELNDYKLRKRKTFEDNIRK-NRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNVT 132

Query:   551 LWLEAARLQ----PVDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRKAL 603
             LWL+ A ++     V+ AR +  +A+  +P   + W K   +E         R+V+ + +
Sbjct:   133 LWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGSRQVFERWM 192

Query:   604 EHIPNSVRLWKAAVELE----DPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             E  P   + W + +  E    + + AR +    +      V+ W+  AR E     + +A
Sbjct:   193 EWQPEE-QAWHSYINFELRYKEVDRARTIYIALLVIVHPDVKNWIKYARFEEKHCYFAHA 251

Query:   656 RKVLNKARE 664
             RKV  +A E
Sbjct:   252 RKVYERAVE 260

 Score = 111 (44.1 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
 Identities = 58/239 (24%), Positives = 99/239 (41%)

Query:   984 ERALQLLDEAIKVFPD----FAKLWMMKGQIE-EQKNLLDKAHDTFSQAIKKCPHSVPLW 1038
             ER  Q+    I++ P     FAK+W++  Q E  QKNL   A      +I KCP +  L+
Sbjct:   408 ERTRQVYQACIELLPHKKFTFAKIWLLYAQFEIRQKNL-PLARRALGTSIGKCPKN-KLF 465

Query:  1039 IMLANLEERRKMLIKARSVLEKGRLRNP-NCAELWLAAIRVEIRAGLKDIANTMMAKALQ 1097
                  LE + +   + R + EK     P NC   W+    +E   G  D A  +   A+ 
Sbjct:   466 KGYIELELQLREFDRCRKLYEKFLEFAPENCTS-WIKFAELETILGDIDRARAIYELAIS 524

Query:  1098 ECPNAG---ILWAEAIFLEPRPQRKTKSVDALKKC-EHDPHVLLAVSKLFWCENKNQKCH 1153
             + P      +LW   I  E   +   K+ +  ++  +   HV + +S   + + +     
Sbjct:   525 Q-PRLDMPEVLWKSYIDFEIEQEEYEKTRNLYRRLLQRTQHVKVWIS---FAQFELSAGK 580

Query:  1154 RSGSRRCMGVKTKSVDALKKCEH-DPHVLLAVS-KLFWCENKNQKCREWFNRTVKIDPD 1210
                  +C  +  ++  A++ CE  +  V+L  S K F  E      +E   R  K+ P+
Sbjct:   581 EESLSKCRQIYEEANKAMRNCEEKEERVMLLESWKTFEEEFGTDSTKE---RIEKLMPE 636

 Score = 44 (20.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query:  1191 ENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKK 1236
             + + +K R  + R ++    +   W  F +FE+  G EE+ ++ ++
Sbjct:   545 QEEYEKTRNLYRRLLQRTQHV-KVWISFAQFELSAGKEESLSKCRQ 589


>DICTYBASE|DDB_G0280363 [details] [associations]
            symbol:DDB_G0280363 species:44689 "Dictyostelium
            discoideum" [GO:0006396 "RNA processing" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] InterPro:IPR003107 InterPro:IPR011990
            InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
            SMART:SM00386 dictyBase:DDB_G0280363 GO:GO:0005622
            EMBL:AAFI02000035 EMBL:AAFI02000036 GO:GO:0006396 Gene3D:1.25.40.10
            RefSeq:XP_641155.1 RefSeq:XP_641400.1 ProteinModelPortal:Q54VF4
            GeneID:8622534 GeneID:8622535 KEGG:ddi:DDB_G0280363
            KEGG:ddi:DDB_G0280519 eggNOG:NOG282937 InParanoid:Q54VF5
            ProtClustDB:CLSZ2497219 Uniprot:Q54VF4
        Length = 1304

 Score = 188 (71.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 88/407 (21%), Positives = 170/407 (41%)

Query:   749 WMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVA 808
             ++E A+    Q   + AR  Y +  +T P     WL  A  E+++G  E  + +LQ  + 
Sbjct:   772 YLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYGRLEKCQKILQLGLK 831

Query:   809 HCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAK 868
             HCP +E L + G +  +K         +   G R  L  L  +++    K+    + G  
Sbjct:   832 HCPFNESLLIKGIRHEEK--------MDNLEGARALLSQLRDQSIY---KTWRAVMEGGL 880

Query:   869 SKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXX 928
              +  AG++  AR I     +  P    I+  A KLE    EYE                 
Sbjct:   881 LEARAGNIDVARKIFKYLMKHVPWYGPIYQEAYKLEERCEEYERAINIVEKGLFE----- 935

Query:   929 XNPNSEEIWLAAVKL-ESENNEYEXXXXXXXXXXXSAP----TPRVMIQSAKLEWCLDNL 983
              +P    +W +A++L E  ++ +             A     T ++  ++A++E    NL
Sbjct:   936 -DPKYGPLWFSALRLYEKTSHGFLQSTRNTVERARQAVSREVTWKIYFEAAQIEERSKNL 994

Query:   984 ERALQLLDEAIKVFPD--FAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIML 1041
               +     +++++ P+    K+W+   + E   + +  A     +A+++ P  +   ++L
Sbjct:   995 TLSRAAYVKSVELCPENLLWKVWLGGSRTELNADNICIARKLVFRALEEVPSKLRSLVLL 1054

Query:  1042 --ANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQEC 1099
               + LEE    + K+R +L+   +      +++L ++ +E+RA   + A     ++L+  
Sbjct:  1055 EYSRLEEYAGNINKSRRILKMAHVEARLDWKVFLESVLLEMRANNYEAAIKEAKESLKIH 1114

Query:  1100 PNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCE 1146
               AG LWA  I L      K++ ++  KK        +  S   WCE
Sbjct:  1115 SGAGRLWAALIQLNQLKGVKSQ-LNVFKKALQ----FVPKSGEVWCE 1156

 Score = 146 (56.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
 Identities = 90/443 (20%), Positives = 176/443 (39%)

Query:   829 WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQ 888
             WL  A  E+++G  E  + +LQ  + HCP +E L + G + +    ++  AR +LS   Q
Sbjct:   806 WLEYAKMEEDYGRLEKCQKILQLGLKHCPFNESLLIKGIRHEEKMDNLEGARALLS---Q 862

Query:   889 ANPNS-EEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN-PNSEEIWLAAVKLESE 946
                 S  + W A +    E    E                  + P    I+  A KLE  
Sbjct:   863 LRDQSIYKTWRAVM----EGGLLEARAGNIDVARKIFKYLMKHVPWYGPIYQEAYKLEER 918

Query:   947 NNEYEXXXXXXXXXXXSAPT--P------RVMIQSAK--LEWCLDNLERALQLLDEAIKV 996
               EYE             P   P      R+  +++   L+   + +ERA Q +   +  
Sbjct:   919 CEEYERAINIVEKGLFEDPKYGPLWFSALRLYEKTSHGFLQSTRNTVERARQAVSREVTW 978

Query:   997 FPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSV--PLWIMLANLEERRKMLIKA 1054
                  K++    QIEE+   L  +   + ++++ CP ++   +W+  +  E     +  A
Sbjct:   979 -----KIYFEAAQIEERSKNLTLSRAAYVKSVELCPENLLWKVWLGGSRTELNADNICIA 1033

Query:  1055 RSVLEKGRLRNPNCAE--LWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFL 1112
             R ++ +     P+     + L   R+E  AG  + +  ++  A  E      ++ E++ L
Sbjct:  1034 RKLVFRALEEVPSKLRSLVLLEYSRLEEYAGNINKSRRILKMAHVEARLDWKVFLESVLL 1093

Query:  1113 EPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALK 1172
             E R         A+K+ +    +     +L W     Q     G +  + V  K++  + 
Sbjct:  1094 EMRANNYEA---AIKEAKESLKIHSGAGRL-WAA-LIQLNQLKGVKSQLNVFKKALQFVP 1148

Query:  1173 KCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIIN-GTEETQ 1231
             K      V    +++    N+ ++ R +    ++  P  GD++    + EI+  G     
Sbjct:  1149 K---SGEVWCEGARIALNNNELREARRFLEFAIQFTPQFGDSFIELLRLEIMEKGPNCDI 1205

Query:  1232 AEVKKRCLAAEPKHGENW--CRV 1252
             +++++ C+ A+P +G  W  C V
Sbjct:  1206 SKLEQLCINADPNYGFMWLHCTV 1228

 Score = 38 (18.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 8/31 (25%), Positives = 19/31 (61%)

Query:   679 LEEAHGNNAMVDKIIDRALSSLSA-NGVEIN 708
             +  + G+N M++ +    ++ +S+ NG+ IN
Sbjct:   213 MTSSSGSNMMINDV-SFGMNGISSINGISIN 242

 Score = 37 (18.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query:   377 WKNVPEVGDARNRKQRNPRAEKF 399
             W+   E+ D  NR+     A KF
Sbjct:   769 WRVYLELADLANRQNNLKLARKF 791


>FB|FBgn0000377 [details] [associations]
            symbol:crn "crooked neck" species:7227 "Drosophila
            melanogaster" [GO:0007443 "Malpighian tubule morphogenesis"
            evidence=IMP] [GO:0007417 "central nervous system development"
            evidence=NAS] [GO:0005634 "nucleus" evidence=IC;NAS] [GO:0007422
            "peripheral nervous system development" evidence=NAS] [GO:0048663
            "neuron fate commitment" evidence=NAS] [GO:0007405 "neuroblast
            proliferation" evidence=NAS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC;ISS] [GO:0016607 "nuclear speck" evidence=IDA]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IMP] [GO:0007438 "oenocyte development"
            evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
            [GO:0008366 "axon ensheathment" evidence=IMP] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
            "precatalytic spliceosome" evidence=IDA] [GO:0051298 "centrosome
            duplication" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
            [GO:0072686 "mitotic spindle" evidence=IDA] [GO:0022008
            "neurogenesis" evidence=IMP] InterPro:IPR003107 InterPro:IPR011990
            InterPro:IPR013026 Pfam:PF02184 SMART:SM00386 GO:GO:0005813
            GO:GO:0051298 GO:GO:0016607 EMBL:AE014298 GO:GO:0007438
            Gene3D:1.25.40.10 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            GO:GO:0008347 GO:GO:0072686 GO:GO:0007443 GO:GO:0000381
            GO:GO:0008366 eggNOG:NOG327505 KO:K12869 OMA:KFTFAKI
            GeneTree:ENSGT00550000074931 EMBL:X58374 EMBL:AL009195
            EMBL:AY051666 PIR:T13427 RefSeq:NP_477118.1 UniGene:Dm.3140
            ProteinModelPortal:P17886 SMR:P17886 DIP:DIP-17429N IntAct:P17886
            MINT:MINT-282072 STRING:P17886 PaxDb:P17886
            EnsemblMetazoa:FBtr0070418 GeneID:31208 KEGG:dme:Dmel_CG3193
            CTD:12935 FlyBase:FBgn0000377 HOGENOM:HOG000264173
            InParanoid:P17886 OrthoDB:EOG4J9KDW PhylomeDB:P17886
            GenomeRNAi:31208 NextBio:772455 Bgee:P17886 GermOnline:CG3193
            Uniprot:P17886
        Length = 702

 Score = 134 (52.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
 Identities = 93/415 (22%), Positives = 164/415 (39%)

Query:   518 WIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQ----PVDTARAVIAQAVR 573
             WI  A+ EE   ++Q AR++  +  +    +  LWL+ A ++     V+ AR +  +AV 
Sbjct:    79 WIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVT 138

Query:   574 HIPTSVRIWIKAADLET--ETKA-KRRVYRKALEHIPNSVRLWKAAVELE----DPEDAR 626
              +P   + W K   +E   E  A  R+V+ + +E  P   + W+  V  E    + + AR
Sbjct:   139 IMPRVNQFWYKYTYMEEMLENVAGARQVFERWMEWQPEE-QAWQTYVNFELRYKEIDRAR 197

Query:   627 ILLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTD---RQIWTTAAKL 679
              +  R V   P  V+ W+  AR E        +R+V  +A E    D    +++   A+ 
Sbjct:   198 EIYERFVYVHP-DVKNWIKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARF 256

Query:   680 EEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYG 739
             EE    +     I   AL  L  +      +  FK   + EK                YG
Sbjct:   257 EEGQKEHDRARIIYKYALDHLPKD----RTQELFKAYTKHEKK---------------YG 297

Query:   740 VEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESL 799
                 DR    +ED     ++  Y+     Y Q +A  P+    W       +  G R+ +
Sbjct:   298 ----DR--AGIEDV--IVSKRKYQ-----YEQEVAANPTNYDAWFDYLRLIEAEGDRDQI 344

Query:   800 ETLLQKAVAHCPKSEV--LWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCP 857
                 ++A+++ P +     W                  E    TR+  +T L+  + H  
Sbjct:   345 RETYERAISNVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCLE-LIPHKQ 403

Query:   858 KS-EVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYE 911
              +   LWL+ A+ +    ++  AR  L LA    P  ++++   + LE +  E+E
Sbjct:   404 FTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPR-DKLFRGYIDLEIQLREFE 457

 Score = 133 (51.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
 Identities = 99/519 (19%), Positives = 189/519 (36%)

Query:   586 ADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPED----ARILLSRAVECCPTSVE 641
             A+L    + KR+ +   L      V  W    + E+ +     AR +  RA++    +V 
Sbjct:    52 AELADYQQRKRKTFEDNLRKNRMVVSHWIKYAQWEEQQQEIQRARSIWERALDNEHRNVT 111

Query:   642 LWLALARLET----YENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRAL 697
             LWL  A +E       +AR + ++A   +P   Q W     +EE   N A   ++ +R +
Sbjct:   112 LWLKYAEMEMKNKQVNHARNLWDRAVTIMPRVNQFWYKYTYMEEMLENVAGARQVFERWM 171

Query:   698 S---SLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAE 754
                    A    +N E  +KE    ++A  ++      R +  +     D K+ W++ A 
Sbjct:   172 EWQPEEQAWQTYVNFELRYKEI---DRAREIYE-----RFVYVH----PDVKN-WIKFAR 218

Query:   755 SCANQGAYECARAIYAQALATFPS---KKSIWLRAAYFEKNHGTRESLETLLQKAVAHCP 811
                + G    +R ++ +A+  F     ++ +++  A FE+     +    + + A+ H P
Sbjct:   219 FEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARFEEGQKEHDRARIIYKYALDHLP 278

Query:   812 KSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKW 871
             K     L  A +  +  +   A  E    ++   +   ++ VA  P +   W    +   
Sbjct:   279 KDRTQELFKAYTKHEKKYGDRAGIEDVIVSKRKYQ--YEQEVAANPTNYDAWFDYLRLIE 336

Query:   872 LAGDVPAARGILSLAFQANP--NSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXX 929
               GD    R     A    P  N +  W   + L      YE                  
Sbjct:   337 AEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCL 396

Query:   930 N--PNSE----EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNL 983
                P+ +    ++WL   + E    E +             P  ++      LE  L   
Sbjct:   397 ELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPRDKLFRGYIDLEIQLREF 456

Query:   984 ERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIML 1041
             ER   L ++ ++  P+    WM   ++E      D+A   F  A+++    +P  LW   
Sbjct:   457 ERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRARAIFELAVQQPRLDMPELLWKAY 516

Query:  1042 ANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEI 1080
              + E        AR + E+  L      ++W++  + E+
Sbjct:   517 IDFEVALGETELARQLYER-LLERTQHVKVWMSFAKFEM 554

 Score = 76 (31.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
 Identities = 33/137 (24%), Positives = 59/137 (43%)

Query:   974 AKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPH 1033
             A+ E     L+RA + L  AI + P   KL+     +E Q    ++    + + ++  P 
Sbjct:   414 AQFEIRCKELQRARKALGLAIGMCPR-DKLFRGYIDLEIQLREFERCRMLYEKFLEFGPE 472

Query:  1034 SVPLWIMLANLEERRKMLIKARSVLE----KGRLRNPNCAELWLAAIRVEIRAGLKDIAN 1089
             +   W+  A LE       +AR++ E    + RL  P    LW A I  E+  G  ++A 
Sbjct:   473 NCVTWMKFAELENLLGDTDRARAIFELAVQQPRLDMPEL--LWKAYIDFEVALGETELAR 530

Query:  1090 TMMAKALQECPNAGILW 1106
              +  + L+   +  + W
Sbjct:   531 QLYERLLERTQHVKV-W 546

 Score = 47 (21.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 14/50 (28%), Positives = 24/50 (48%)

Query:  1206 KID-PDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAEPKHGENWCRVAK 1254
             ++D P+L   W  +  FE+  G  E   ++ +R L    +H + W   AK
Sbjct:   505 RLDMPEL--LWKAYIDFEVALGETELARQLYERLLE-RTQHVKVWMSFAK 551


>POMBASE|SPBC31F10.11c [details] [associations]
            symbol:cwf4 "complexed with Cdc5 protein Cwf4"
            species:4896 "Schizosaccharomyces pombe" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IDA]
            [GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IC]
            InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
            Pfam:PF02184 SMART:SM00386 PomBase:SPBC31F10.11c EMBL:CU329671
            GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0007049
            Gene3D:1.25.40.10 GO:GO:0045292 eggNOG:NOG327505 KO:K12869
            HOGENOM:HOG000207972 OMA:KFTFAKI OrthoDB:EOG4NKG44 EMBL:AF254353
            PIR:T40214 RefSeq:NP_596573.1 ProteinModelPortal:P87312
            IntAct:P87312 STRING:P87312 EnsemblFungi:SPBC31F10.11c.1
            GeneID:2540328 KEGG:spo:SPBC31F10.11c NextBio:20801457
            Uniprot:P87312
        Length = 674

 Score = 143 (55.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
 Identities = 105/550 (19%), Positives = 195/550 (35%)

Query:   566 AVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWK--AAVELEDPE 623
             AV  Q V  +P  + I     +L+     KR+ +  A+     ++  W      EL+  E
Sbjct:    27 AVERQDVAFVPPKINI-TDLEELQEFQGRKRKEFEDAIRRNRLAMGHWMRYGQWELDQKE 85

Query:   624 DARI--LLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIWTTAA 677
              AR   +  RA++   T + LWL     E       +AR + ++A   +P   ++W    
Sbjct:    86 FARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVTQLPRVDKLWYKYV 145

Query:   678 KLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIG 737
              +EE  GN     ++ +R L         ++     +   E E+A  ++    ++   + 
Sbjct:   146 YMEEMLGNITGCRQVFERWLKWEPDENCWMSYIRMERRYHENERARGIYERFVVVHPEVT 205

Query:   738 YGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSK---KSIWLRAAYFEKNHG 794
               +        W    E C N       R +Y  A+     +   +  ++  A FE    
Sbjct:   206 NWLR-------WARFEEECGNAAN---VRQVYLAAIDALGQEFLNERFFIAFAKFEIRQK 255

Query:   795 TRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLE-TLL---- 849
               E   T+ + A+   P+S+ +           ++    +FEK  G    +E T+L    
Sbjct:   256 EYERARTIFKYAIDFMPRSKSM----------ELYKEYTHFEKQFGDHLGVESTVLDKRR 305

Query:   850 ---QKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEE--IWLAAVKLE 904
                +K +   P     WL   K +  AGD+   R     A    P   E   W   V + 
Sbjct:   306 LQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYVYIW 365

Query:   905 SENNEYEXXXXXXXXXXXXXXXXXXN--PNSE----EIWLAAVKLESENNEYEXXXXXXX 958
                  +E                     P+ +    ++WL     E    + +       
Sbjct:   366 LNYCLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLG 425

Query:   959 XXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLD 1018
                   P P++     + E  +   +R   L ++ I   P+    W+    +E +    D
Sbjct:   426 RALGMCPKPKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSD 485

Query:  1019 KAHDTFSQAIKKCPHSVP--LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAI 1076
             +A   ++ A+ +     P  +W    + E       KARS+ ++  LR     ++W++  
Sbjct:   486 RARALYNLAVNQPILETPELVWKAYIDFEFEEMEYGKARSIYQQ-LLRTAPHVKVWISFA 544

Query:  1077 RVEIRAGLKD 1086
               EI A L+D
Sbjct:   545 NFEI-AHLED 553

 Score = 129 (50.5 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
 Identities = 42/166 (25%), Positives = 72/166 (43%)

Query:   982 NLERALQLLDEAIKVFPD----FAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPL 1037
             +++RA ++  EA+K+ P     FAKLW+M    E ++  +D A  T  +A+  CP    L
Sbjct:   378 DVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKP-KL 436

Query:  1038 WIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQ 1097
             +      E+  K   + R + EK  L +P     WL    +E + G  D A  +   A+ 
Sbjct:   437 FRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARALYNLAVN 496

Query:  1098 E--CPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHD-PHVLLAVS 1140
             +       ++W   I  E       K+    ++     PHV + +S
Sbjct:   497 QPILETPELVWKAYIDFEFEEMEYGKARSIYQQLLRTAPHVKVWIS 542

 Score = 71 (30.1 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
 Identities = 35/197 (17%), Positives = 76/197 (38%)

Query:   493 DINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLW 552
             D  +  +AR + +   + +  + P W+     E     +  ARNL  +   +    + LW
Sbjct:    82 DQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVTQLPRVDKLW 141

Query:   553 LEAARLQP----VDTARAVIAQAVRHIPTSVRIWIKAADLET---ETKAKRRVYRK-ALE 604
              +   ++     +   R V  + ++  P     W+    +E    E +  R +Y +  + 
Sbjct:   142 YKYVYMEEMLGNITGCRQVFERWLKWEPDE-NCWMSYIRMERRYHENERARGIYERFVVV 200

Query:   605 H--IPNSVRLWKAAVELEDPEDARILLSRAVECCPTSV---ELWLALARLET----YENA 655
             H  + N +R  +   E  +  + R +   A++           ++A A+ E     YE A
Sbjct:   201 HPEVTNWLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKEYERA 260

Query:   656 RKVLNKARENIPTDRQI 672
             R +   A + +P  + +
Sbjct:   261 RTIFKYAIDFMPRSKSM 277

 Score = 57 (25.1 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
 Identities = 24/94 (25%), Positives = 39/94 (41%)

Query:   497 IKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGC-------EENQTSE 549
             + K RL  + + + +P     W+   +LEE  G +   R    K         E+N    
Sbjct:   301 LDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRR 360

Query:   550 D--LWL-----EAARLQPVDTARAVIAQAVRHIP 576
                +WL     E   ++ VD AR V  +A++ IP
Sbjct:   361 YVYIWLNYCLFEEIDVKDVDRARKVYQEALKLIP 394

 Score = 43 (20.2 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query:  1213 DAWAYFYKFEIINGTEETQAEV 1234
             +AW    +FE ++GTE+T+  V
Sbjct:   597 EAWK---QFEAMHGTEDTRKHV 615


>UNIPROTKB|F1MZT2 [details] [associations]
            symbol:CRNKL1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000245 "spliceosomal
            complex assembly" evidence=IEA] InterPro:IPR003107
            InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293
            SMART:SM00386 GO:GO:0003723 Gene3D:1.25.40.10 GO:GO:0071013
            GO:GO:0000245 OMA:KFTFAKI GeneTree:ENSGT00550000074931
            EMBL:DAAA02035750 IPI:IPI01017666 Ensembl:ENSBTAT00000011148
            Uniprot:F1MZT2
        Length = 781

 Score = 153 (58.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
 Identities = 94/512 (18%), Positives = 197/512 (38%)

Query:   600 RKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             RK    I N ++  +    L++ + AR +  RA++    ++ LWL  A +E       +A
Sbjct:   159 RKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHA 218

Query:   656 RKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALS---SLSANGVEINREHW 712
             R + ++A   +P   Q W     +EE  GN A   ++ +R +       A    IN E  
Sbjct:   219 RNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWRPEEQAWHSYINFELR 278

Query:   713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQA 772
             +KE    ++A +++  +  I +++   +   D K+ W++ A      G +  AR +Y +A
Sbjct:   279 YKEV---DRARTIY--ERYIHSLV---LVHPDVKN-WIKYARFEEKHGYFAHARKVYERA 329

Query:   773 LATFPSK---KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIW 829
             +  F  +   + +++  A FE+N    E +  + + A+    K E           + ++
Sbjct:   330 VEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEA----------QELF 379

Query:   830 LRAAYFEKNHGTRESLETLL--------QKAVAHCPKSEVLWLMGAKSKWLAGDVPAARG 881
                  FEK  G R  +E ++        ++ V   P +   W    +      +    R 
Sbjct:   380 KNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVRE 439

Query:   882 ILSLAFQANPNSEEI--WLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN--PNSE--- 934
             +   A    P  +E   W   + L      YE                     P+ +   
Sbjct:   440 VYERAIANVPPVQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTF 499

Query:   935 -EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEA 993
              ++WL   + E                    P  ++     +LE  L   +R  +L ++ 
Sbjct:   500 AKMWLLYAQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKF 559

Query:   994 IKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKML 1051
             ++  P+    W+   ++E     +++A   +  AI +    +P  LW    + E  ++  
Sbjct:   560 LEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEET 619

Query:  1052 IKARSVLEKGRLRNPNCAELWLAAIRVEIRAG 1083
              + R++  +  L+     ++W++  + E+ +G
Sbjct:   620 ERTRNLYRR-LLQRTQHVKVWISFAQFELSSG 650

 Score = 42 (19.8 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
 Identities = 9/46 (19%), Positives = 24/46 (52%)

Query:  1191 ENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKK 1236
             + + ++ R  + R ++    +   W  F +FE+ +G E + A+ ++
Sbjct:   616 QEETERTRNLYRRLLQRTQHV-KVWISFAQFELSSGKEGSLAKCRQ 660


>DICTYBASE|DDB_G0278819 [details] [associations]
            symbol:DDB_G0278819 "HAT repeat-containing protein"
            species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
            processing" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0003674 "molecular_function" evidence=ND] [GO:0005681
            "spliceosomal complex" evidence=IEA;ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0000245 "spliceosomal complex assembly"
            evidence=ISS] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IEA] [GO:0044351 "macropinocytosis"
            evidence=RCA] InterPro:IPR003107 InterPro:IPR011990
            InterPro:IPR013026 Pfam:PF02184 SMART:SM00386
            dictyBase:DDB_G0278819 GO:GO:0005737 GenomeReviews:CM000152_GR
            GO:GO:0016607 GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.10
            EMBL:AAFI02000024 GO:GO:0000245 eggNOG:NOG327505 KO:K12869
            OMA:KFTFAKI RefSeq:XP_641986.1 ProteinModelPortal:Q54XP4
            STRING:Q54XP4 PRIDE:Q54XP4 EnsemblProtists:DDB0233480
            GeneID:8621718 KEGG:ddi:DDB_G0278819 ProtClustDB:CLSZ2729102
            Uniprot:Q54XP4
        Length = 705

 Score = 142 (55.0 bits), Expect = 9.8e-06, P = 9.8e-06
 Identities = 101/521 (19%), Positives = 187/521 (35%)

Query:   587 DLETETKAKRRVYRKALEHIPNSVRLW-KAAVELEDPED---ARILLSRAVECCPTSVEL 642
             +LE     KR+ Y   L     +  ++ K A   E  +D   AR +  R ++       +
Sbjct:    52 ELEDYRLRKRQQYESLLGRNRKTAAIYIKYAAWEESQKDLTRARSVFERFLDIDHRIPTV 111

Query:   643 WLALARLETYEN----ARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALS 698
             W+  A +E        AR + ++A   +P   Q+W     +E+  GN      I +R + 
Sbjct:   112 WIKYAEMEMKNKNINLARNIWDRAVCLLPRVSQLWFKYTFMEDMLGNYPAARAIFERWMQ 171

Query:   699 SLSANGVEINREHWFKEAIEA-EKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCA 757
                      N    F++ ++  E    +     L+   I           TW++  +   
Sbjct:   172 -WKPEPQAWNSYLKFEQRLKLFENTRLIFEKYILVHPYI----------KTWIKYTKFEE 220

Query:   758 NQGAYECARAIYAQA---LATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSE 814
               G  E AR I+ +A   L    + + +++  A FE+ +   E    + + A+ H PKS 
Sbjct:   221 RLGNIENARTIFQRAIEFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYAIDHVPKSR 280

Query:   815 VLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLL--------QKAVAHCPKSEVLWLMG 866
                L    +N          FEK HG R  +E ++        ++ +    K+  +W   
Sbjct:   281 AKDLFDTFTN----------FEKQHGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDY 330

Query:   867 AKSKWLAGDVPAARGILSLAFQANP--NSEEIWLAAVKLESENNEYEXXXXXXXXXXXXX 924
              K + + G++   R I   +    P  N ++ W   + L      +E             
Sbjct:   331 LKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYALFEELISKDMERARSV 390

Query:   925 XXXXXN--PNSE----EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEW 978
                     P+ E    +IW+     E      +             P  ++  Q   LE 
Sbjct:   391 YSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKARLIYGQAIGRNPKSKIFDQYIHLEI 450

Query:   979 CLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP-- 1036
              L N +R   L ++ +++ PD    W    Q+E +     +A   F  AI++     P  
Sbjct:   451 ELGNFDRVRTLYEKYLEIMPDNCDAWCKFAQLETELGETVRARAIFELAIQQPNLDRPEV 510

Query:  1037 LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIR 1077
             +W    + E + K     + +  K  L   N  ++W+  I+
Sbjct:   511 VWKDFIDSEIQLKQFDFVKQLYRK-LLEKTNHVKVWIGFIK 550


>UNIPROTKB|F1PYE9 [details] [associations]
            symbol:CRNKL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003107
            InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293
            SMART:SM00386 GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10
            OMA:KFTFAKI GeneTree:ENSGT00550000074931 EMBL:AAEX03013754
            Ensembl:ENSCAFT00000008599 Uniprot:F1PYE9
        Length = 797

 Score = 137 (53.3 bits), Expect = 4.0e-05, P = 4.0e-05
 Identities = 92/509 (18%), Positives = 192/509 (37%)

Query:   600 RKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLET----YENA 655
             RK    I N ++  +    L++ + AR +  RA++    ++ LWL  A +E       +A
Sbjct:   180 RKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHA 239

Query:   656 RKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALS---SLSANGVEINREHW 712
             R + ++A   +P   Q W     +EE  GN A   ++ +R +       A    IN E  
Sbjct:   240 RNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWQPEEQAWHSYINFELR 299

Query:   713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQA 772
             +KE    ++A +++        ++ +     D K+ W++ A      G +  AR +Y +A
Sbjct:   300 YKEV---DRARTIYYFLNSPELVLVH----PDVKN-WIKYARFEEKHGYFAHARKVYERA 351

Query:   773 LATFPSK---KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIW 829
             +  F  +   + +++  A FE+N    E +  + + A+    K E           + ++
Sbjct:   352 VEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEA----------QELF 401

Query:   830 LRAAYFEKNHGTRESLETLL--------QKAVAHCPKSEVLWLMGAKSKWLAGDVPAARG 881
                  FEK  G R  +E ++        ++ V   P +   W    +      +    R 
Sbjct:   402 KNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVRE 461

Query:   882 ILSLAFQANPNSEEI--WLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXN--PNSE--- 934
             +   A    P  +E   W   + L      YE                     P+ +   
Sbjct:   462 VYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTF 521

Query:   935 -EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNLERALQLLDEA 993
              ++WL   + E                    P  ++     +LE  L   +R  +L ++ 
Sbjct:   522 AKMWLLYAQFEIRQKNLPVSVSLLGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKF 581

Query:   994 IKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIMLANLEERRKML 1051
             ++  P+    W+   ++E     +++A   +  AI +    +P  LW    + E  ++  
Sbjct:   582 LEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEET 641

Query:  1052 IKARSVLEKGRLRNPNCAELWLAAIRVEI 1080
              + R++  +  L+     ++W++  + E+
Sbjct:   642 ERTRNLYRR-LLQRTQHVKVWISFAQFEL 669

 Score = 125 (49.1 bits), Expect = 0.00078, P = 0.00078
 Identities = 78/374 (20%), Positives = 134/374 (35%)

Query:   640 VELWLALARLET----YENARKVLNKARE---NIPTDRQIWTTAAKLEEAHGNNAMVDKI 692
             V+ W+  AR E     + +ARKV  +A E   +   D  ++   AK EE       V  I
Sbjct:   325 VKNWIKYARFEEKHGYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVI 384

Query:   693 IDRALSSLSANGVEINREHWFKE-AIEAEKAGSVHTCQALIRAIIGYGVEQEDRKH---- 747
                AL  +S        +  FK   I  +K G     + +I +   +  E+E + +    
Sbjct:   385 YKYALDRISKQ----EAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNY 440

Query:   748 -TWMEDAESCANQGAYECARAIYAQALATFP--SKKSIWLRAAYFEKNHGTRESLETLLQ 804
               W +      +    E  R +Y +A+A  P   +K  W R  Y   N+   E LE    
Sbjct:   441 DAWFDYLRLVESDAEAETVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDP 500

Query:   805 KAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWL 864
             +      ++ +  +   K     +WL  A FE          +LL  ++  CPK++ L+ 
Sbjct:   501 ERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLPVSVSLLGTSIGKCPKNK-LFK 559

Query:   865 MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXX 924
                + +    +    R +     +  P +   W+   +LE+   + E             
Sbjct:   560 GYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQP 619

Query:   925 XXXXXNPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCL---D 981
                   P  E +W + +  E E  E E                +V I  A+ E       
Sbjct:   620 RLDM--P--EVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHVKVWISFAQFELSSRKEG 675

Query:   982 NLERALQLLDEAIK 995
             +L +  Q+ +EA K
Sbjct:   676 SLAKCRQIYEEANK 689


>TAIR|locus:2080853 [details] [associations]
            symbol:AT3G51110 species:3702 "Arabidopsis thaliana"
            [GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA;ISS]
            InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
            Pfam:PF02184 PROSITE:PS50293 SMART:SM00386 EMBL:CP002686
            GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10 IPI:IPI00546615
            RefSeq:NP_566944.1 UniGene:At.857 ProteinModelPortal:F4J390
            SMR:F4J390 EnsemblPlants:AT3G51110.1 GeneID:824275
            KEGG:ath:AT3G51110 OMA:ERSHTIF Uniprot:F4J390
        Length = 413

 Score = 132 (51.5 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 68/312 (21%), Positives = 123/312 (39%)

Query:   818 LMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVA-HCPKSEVLWLMGAKSKWLAGDV 876
             + GAK+N + +W+R A +E++    +   ++ ++A+     ++  LWL  A+ +     V
Sbjct:    64 IRGAKTNSQ-VWVRYADWEESQKDHDRARSVWERALEDESYRNHTLWLKYAEFEMRNKSV 122

Query:   877 PAARGILSLAFQANPNSEEIWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEI 936
               AR +   A +  P  ++ W   + +E      E                  +P+ ++ 
Sbjct:   123 NHARNVWDRAVKILPRVDQFWYKYIHME------EILGNIDGARKIFERWMDWSPD-QQA 175

Query:   937 WLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEW-----CLDNL--ERALQL 989
             WL  +K E   NE E             P     I+ AK E       L  +  ERA+++
Sbjct:   176 WLCFIKFELRYNEIERSRSIYERFVLCHPKASSFIRYAKFEMKNSQVSLARIVYERAIEM 235

Query:   990 L----DEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHS--VPLWIMLAN 1043
             L    +EA  +F  FA+   +  ++E  + L   A D   +   +  +   V       N
Sbjct:   236 LKDVEEEAEMIFVAFAEFEELCKEVERARFLYKYALDHIPKGRAEDLYKKFVAFEKQYGN 295

Query:  1044 LEERRKMLIKARSVLEKGRLR-NPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNA 1102
              E     ++  R +  +G +R NP   + W   I +E   G KD    +  +A+   P A
Sbjct:   296 KEGIDDAIVGRRKLQYEGEVRKNPLNYDSWFDYISLEETLGDKDRIREVYERAIANVPLA 355

Query:  1103 GI--LWAEAIFL 1112
                  W   I+L
Sbjct:   356 EEKRYWQRYIYL 367

 Score = 121 (47.7 bits), Expect = 0.00082, P = 0.00082
 Identities = 67/304 (22%), Positives = 118/304 (38%)

Query:   572 VRHIPTSVRIWIKAADLETETK---AKRRVYRKALEHIP-NSVRLWKAAVELE----DPE 623
             +R   T+ ++W++ AD E   K     R V+ +ALE     +  LW    E E       
Sbjct:    64 IRGAKTNSQVWVRYADWEESQKDHDRARSVWERALEDESYRNHTLWLKYAEFEMRNKSVN 123

Query:   624 DARILLSRAVECCPTSVELWLALARLE----TYENARKVLNKARENIPTDRQIWTTAAKL 679
              AR +  RAV+  P   + W     +E      + ARK+  +  +  P D+Q W    K 
Sbjct:   124 HARNVWDRAVKILPRVDQFWYKYIHMEEILGNIDGARKIFERWMDWSP-DQQAWLCFIKF 182

Query:   680 EEAHGNNAMVDKIIDR-ALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGY 738
             E  +        I +R  L    A+      +   K + +   A  V+  +  I  +   
Sbjct:   183 ELRYNEIERSRSIYERFVLCHPKASSFIRYAKFEMKNS-QVSLARIVY--ERAIEMLKDV 239

Query:   739 GVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKS--IWLRAAYFEKNHGTR 796
               E E     + E  E C      E AR +Y  AL   P  ++  ++ +   FEK +G +
Sbjct:   240 EEEAEMIFVAFAEFEELCKE---VERARFLYKYALDHIPKGRAEDLYKKFVAFEKQYGNK 296

Query:   797 ESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHC 856
             E ++     A+    K +    +         W      E+  G ++ +  + ++A+A+ 
Sbjct:   297 EGIDD----AIVGRRKLQYEGEVRKNPLNYDSWFDYISLEETLGDKDRIREVYERAIANV 352

Query:   857 PKSE 860
             P +E
Sbjct:   353 PLAE 356


>TAIR|locus:2161363 [details] [associations]
            symbol:AT5G45990 species:3702 "Arabidopsis thaliana"
            [GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IEA] [GO:0006396 "RNA processing" evidence=IEA;ISS]
            [GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR003107
            InterPro:IPR008847 InterPro:IPR011990 InterPro:IPR013026
            Pfam:PF02184 Pfam:PF05843 PROSITE:PS50293 SMART:SM00386
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006397
            Gene3D:1.25.40.10 EMBL:AB006698 eggNOG:NOG327505
            HOGENOM:HOG000207972 IPI:IPI00521045 RefSeq:NP_199411.1
            UniGene:At.55396 ProteinModelPortal:Q9FNM3 SMR:Q9FNM3 PaxDb:Q9FNM3
            PRIDE:Q9FNM3 EnsemblPlants:AT5G45990.1 GeneID:834639
            KEGG:ath:AT5G45990 TAIR:At5g45990 InParanoid:Q9FNM3 OMA:SAFIRYA
            PhylomeDB:Q9FNM3 ProtClustDB:CLSN2684756 Genevestigator:Q9FNM3
            Uniprot:Q9FNM3
        Length = 673

 Score = 129 (50.5 bits), Expect = 0.00023, P = 0.00023
 Identities = 100/521 (19%), Positives = 192/521 (36%)

Query:   595 KRRVYRKALEHIPNSVRLWKAAVELEDPE-D---ARILLSRAVECCPTSVELWLALARLE 650
             +R+ +   +     ++++W    + E+ + D   AR +  RA+E    +  LW+  A  E
Sbjct:    63 RRKEFEDQIRRARWNIQVWVKYAKWEESQMDYARARSVWERALEGEYRNHTLWVKYAEFE 122

Query:   651 T----YENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVE 706
                    NAR V +++   +P   Q+W     +EE  GN     +I +R ++        
Sbjct:   123 MKNKFVNNARNVWDRSVTLLPRVDQLWEKYIYMEEKLGNVTGARQIFERWMNWSPDQKAW 182

Query:   707 INREHWFKEAIEAEKAGSVHT----CQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAY 762
             +    +     E E+A S++     C   + A I Y   +  R              G  
Sbjct:   183 LCFIKFELRYNEIERARSIYERFVLCHPKVSAFIRYAKFEMKRG-------------GQV 229

Query:   763 ECARAIYAQA---LATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLM 819
             + AR +Y +A   LA     + +++  A FE+     E    + + A+ H  K       
Sbjct:   230 KLAREVYERAVDKLANDEEAEILFVSFAEFEERCKEVERARFIYKFALDHIRKGRA---- 285

Query:   820 GAKSNKKSIWLRAAYFEKNHGTRESLETLL--------QKAVAHCPKSEVLWLMGAKSKW 871
                   + ++ +   FEK +G +E +E  +        +  V+  P +   W    + + 
Sbjct:   286 ------EELYKKFVAFEKQYGDKEGIEDAIVGKKRFEYEDEVSKNPLNYDSWFDYVRLEE 339

Query:   872 LAGDVPAARGILSLAFQANPNSEE--IWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXX 929
               G+    R I   A    P ++E   W   + L      YE                  
Sbjct:   340 SVGNKDRIREIYERAIANVPPAQEKRFWQRYIYLWINYALYEEIETKDVERTRDVYRECL 399

Query:   930 N--PNSE----EIWLAAVKLESENNEYEXXXXXXXXXXXSAPTPRVMIQSAKLEWCLDNL 983
                P+++    +IWL A + E                   AP  ++  +  ++E  L N+
Sbjct:   400 KLIPHTKFSFAKIWLLAAEYEIRQLNLTGARQILGNAIGKAPKVKIFKKYIEMELKLVNI 459

Query:   984 ERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVP--LWIML 1041
             +R  +L +  ++  P+    W    + E      ++A   F  AI +    +P  LW   
Sbjct:   460 DRCRKLYERFLEWSPENCYAWRNYAEFEISLAETERARAIFELAISQPALDMPELLWKTY 519

Query:  1042 ANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRA 1082
              + E       K R++ E+   R  +C ++W++  + E  A
Sbjct:   520 IDFEISEGEFEKTRALYERLLDRTKHC-KVWISFAKFEASA 559


>ZFIN|ZDB-GENE-030616-420 [details] [associations]
            symbol:prpf39 "PRP39 pre-mRNA processing factor 39
            homolog (yeast)" species:7955 "Danio rerio" [GO:0006396 "RNA
            processing" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            InterPro:IPR003107 InterPro:IPR011990 SMART:SM00386
            ZFIN:ZDB-GENE-030616-420 GO:GO:0005634 GO:GO:0008380 GO:GO:0006397
            Gene3D:1.25.40.10 eggNOG:COG5107 EMBL:AL591492 EMBL:BC116540
            IPI:IPI00481955 RefSeq:NP_001004520.1 UniGene:Dr.340
            ProteinModelPortal:Q1JPZ7 STRING:Q1JPZ7 PRIDE:Q1JPZ7
            Ensembl:ENSDART00000061672 GeneID:368864 KEGG:dre:368864 CTD:55015
            GeneTree:ENSGT00390000005033 HOGENOM:HOG000010277
            HOVERGEN:HBG082194 InParanoid:Q1JPZ7 KO:K13217 OMA:GWVYLLQ
            OrthoDB:EOG49GKG9 NextBio:20813235 ArrayExpress:Q1JPZ7 Bgee:Q1JPZ7
            Uniprot:Q1JPZ7
        Length = 752

 Score = 126 (49.4 bits), Expect = 0.00056, P = 0.00056
 Identities = 89/369 (24%), Positives = 142/369 (38%)

Query:   574 HIPTSVRIWIKAADLETE---TKAKRRVYRKALEHIPNSVRLWKAAV----ELEDPED-- 624
             H P     W K AD+E +    +    VYR+ L+ IP SV LW   +    E +D  D  
Sbjct:   195 HYPYCYGYWKKYADIERKHGYIQMADEVYRRGLQAIPLSVDLWLHYITFLRENQDTSDGE 254

Query:   625 --ARILLS--RAVECCPT---SVELWLALARLETYENARKVLNKAREN---IPTDRQIWT 674
               +RI  S   AV  C T   S  LW A    ET +     +    +    IPT  Q+++
Sbjct:   255 AESRIRASYEHAVLACGTDFRSDRLWEAYIAWETEQGKLANVTAIYDRLLCIPT--QLYS 312

Query:   675 TA-AKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGS-VHTCQALI 732
                 K ++   +N     + +    SL       N+    ++A E E  G  +      +
Sbjct:   313 QHFQKFKDHVQSNNPKHFLSEEEFVSLRVELANANKPSGDEDA-ETEAPGEELPPGTEDL 371

Query:   733 RAIIGYGVEQEDRKHTWMEDAESCANQGAYECAR--AI-------YAQALATFPSKKSIW 783
                     E E+ +H  +E  +   N   +E ++  A        Y    A   ++ + W
Sbjct:   372 PDPAKRVTEIENMRHKVIETRQEMFNHNEHEVSKRWAFEEGIKRPYFHVKALEKTQLNNW 431

Query:   784 LRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRE 843
                  FE  +GT E +  L ++ +  C   E  W+  AK           Y E ++ T E
Sbjct:   432 REYLDFELENGTPERVVVLFERCLIACALYEEFWIKYAK-----------YLE-SYST-E 478

Query:   844 SLETLLQKA-VAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVK 902
             ++  + +KA   H PK   + L+ A  +   G +  AR IL     + P    + L  V 
Sbjct:   479 AVRHIYKKACTVHLPKKPNVHLLWAAFEEQQGSIDEARSILKAVEVSVPGLAMVRLRRVS 538

Query:   903 LESENNEYE 911
             LE  +   E
Sbjct:   539 LERRHGNME 547


>WB|WBGene00016837 [details] [associations]
            symbol:C50F2.3 species:6239 "Caenorhabditis elegans"
            [GO:0005622 "intracellular" evidence=IEA] [GO:0006396 "RNA
            processing" evidence=IEA] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0009792 "embryo development ending
            in birth or egg hatching" evidence=IMP] [GO:0009790 "embryo
            development" evidence=IMP] [GO:0001703 "gastrulation with mouth
            forming first" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
            "cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR019734
            Pfam:PF13181 SMART:SM00386 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 GO:GO:0005622
            GO:GO:0006396 GO:GO:0000910 Gene3D:1.25.40.10 InterPro:IPR013105
            Pfam:PF07719 GO:GO:0001703 eggNOG:NOG289100 KO:K12867 OMA:PRSYKLW
            HOGENOM:HOG000176133 GeneTree:ENSGT00550000075140 EMBL:FO080915
            PIR:T29775 RefSeq:NP_491250.1 ProteinModelPortal:P91175 SMR:P91175
            IntAct:P91175 STRING:P91175 PaxDb:P91175 EnsemblMetazoa:C50F2.3.1
            EnsemblMetazoa:C50F2.3.2 GeneID:171970 KEGG:cel:CELE_C50F2.3
            UCSC:C50F2.3 CTD:171970 WormBase:C50F2.3 InParanoid:P91175
            NextBio:873471 Uniprot:P91175
        Length = 855

 Score = 96 (38.9 bits), Expect = 0.00058, Sum P(3) = 0.00058
 Identities = 41/162 (25%), Positives = 69/162 (42%)

Query:   543 EENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAAD--LETETKAKRR--V 598
             +EN T  +    +  ++ + +      + +   PTSV  W +  D  L+ ++ AK+   +
Sbjct:     4 KENATKIEKMPNSETMKGISSEDVPFEEDIIRNPTSVNCWQRYIDHKLQNKSPAKQMFLI 63

Query:   599 YRKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKV 658
             Y +AL     S +LW   ++  +        S  V  CPT    W AL   +TYE     
Sbjct:    64 YERALAVFERSYKLWYHYLKYRE--------STIVNKCPTD-NSWRALC--DTYERCLMR 112

Query:   659 LNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSL 700
             L+K    +P   +IW    ++    G      ++ DRAL SL
Sbjct:   113 LHK----MP---RIWICYCEVMIKRGLITETRRVFDRALRSL 147

 Score = 74 (31.1 bits), Expect = 0.00058, Sum P(3) = 0.00058
 Identities = 22/84 (26%), Positives = 40/84 (47%)

Query:   984 ERALQLLDEAIKVF--PDFAKLW---MMKGQIEEQKNLLDKAHDTFSQAIKKCP--HSVP 1036
             E A Q  ++ I +F  P    +W   ++K         L++A D F Q ++ CP  H+  
Sbjct:   539 ELAFQAYEKGIALFKWPGVFDIWNTYLVKFIKRYGGKKLERARDLFEQCLENCPPTHAKY 598

Query:  1037 LWIMLANLEERRKMLIKARSVLEK 1060
             ++++ A LEE   +   A S+  +
Sbjct:   599 IFLLYAKLEEEHGLARHALSIYNR 622

 Score = 54 (24.1 bits), Expect = 0.00058, Sum P(3) = 0.00058
 Identities = 29/146 (19%), Positives = 56/146 (38%)

Query:   780 KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNH 839
             + +W+  A   +++G  ++     + AV     S+     G  S   ++W   A  E  H
Sbjct:   401 RDLWIGLAKLYEDNGDLDAARKTFETAVI----SQ----FGGVSELANVWCAYAEMEMKH 452

Query:   840 GTRESLETLLQKAV---------------AHCPKSEVLWLMGAKSKWLAGDVPAARGILS 884
                ++  T++Q+A                A   +S +LW M A  +   G V + R +  
Sbjct:   453 KRAKAALTVMQRACVVPKPGDYENMQSVQARVHRSPILWAMYADYEECCGTVESCRKVYD 512

Query:   885 LAFQANPNSEEIWLAAVKLESENNEY 910
                +    S ++ +    +  E NEY
Sbjct:   513 KMIELRVASPQM-IMNYAMFLEENEY 537


>UNIPROTKB|P91175 [details] [associations]
            symbol:C50F2.3 "Protein C50F2.3" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR003107 InterPro:IPR011990
            InterPro:IPR019734 Pfam:PF13181 SMART:SM00386 GO:GO:0009792
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0000003
            GO:GO:0005622 GO:GO:0006396 GO:GO:0000910 Gene3D:1.25.40.10
            InterPro:IPR013105 Pfam:PF07719 GO:GO:0001703 eggNOG:NOG289100
            KO:K12867 OMA:PRSYKLW HOGENOM:HOG000176133
            GeneTree:ENSGT00550000075140 EMBL:FO080915 PIR:T29775
            RefSeq:NP_491250.1 ProteinModelPortal:P91175 SMR:P91175
            IntAct:P91175 STRING:P91175 PaxDb:P91175 EnsemblMetazoa:C50F2.3.1
            EnsemblMetazoa:C50F2.3.2 GeneID:171970 KEGG:cel:CELE_C50F2.3
            UCSC:C50F2.3 CTD:171970 WormBase:C50F2.3 InParanoid:P91175
            NextBio:873471 Uniprot:P91175
        Length = 855

 Score = 96 (38.9 bits), Expect = 0.00058, Sum P(3) = 0.00058
 Identities = 41/162 (25%), Positives = 69/162 (42%)

Query:   543 EENQTSEDLWLEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAAD--LETETKAKRR--V 598
             +EN T  +    +  ++ + +      + +   PTSV  W +  D  L+ ++ AK+   +
Sbjct:     4 KENATKIEKMPNSETMKGISSEDVPFEEDIIRNPTSVNCWQRYIDHKLQNKSPAKQMFLI 63

Query:   599 YRKALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKV 658
             Y +AL     S +LW   ++  +        S  V  CPT    W AL   +TYE     
Sbjct:    64 YERALAVFERSYKLWYHYLKYRE--------STIVNKCPTD-NSWRALC--DTYERCLMR 112

Query:   659 LNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSL 700
             L+K    +P   +IW    ++    G      ++ DRAL SL
Sbjct:   113 LHK----MP---RIWICYCEVMIKRGLITETRRVFDRALRSL 147

 Score = 74 (31.1 bits), Expect = 0.00058, Sum P(3) = 0.00058
 Identities = 22/84 (26%), Positives = 40/84 (47%)

Query:   984 ERALQLLDEAIKVF--PDFAKLW---MMKGQIEEQKNLLDKAHDTFSQAIKKCP--HSVP 1036
             E A Q  ++ I +F  P    +W   ++K         L++A D F Q ++ CP  H+  
Sbjct:   539 ELAFQAYEKGIALFKWPGVFDIWNTYLVKFIKRYGGKKLERARDLFEQCLENCPPTHAKY 598

Query:  1037 LWIMLANLEERRKMLIKARSVLEK 1060
             ++++ A LEE   +   A S+  +
Sbjct:   599 IFLLYAKLEEEHGLARHALSIYNR 622

 Score = 54 (24.1 bits), Expect = 0.00058, Sum P(3) = 0.00058
 Identities = 29/146 (19%), Positives = 56/146 (38%)

Query:   780 KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNH 839
             + +W+  A   +++G  ++     + AV     S+     G  S   ++W   A  E  H
Sbjct:   401 RDLWIGLAKLYEDNGDLDAARKTFETAVI----SQ----FGGVSELANVWCAYAEMEMKH 452

Query:   840 GTRESLETLLQKAV---------------AHCPKSEVLWLMGAKSKWLAGDVPAARGILS 884
                ++  T++Q+A                A   +S +LW M A  +   G V + R +  
Sbjct:   453 KRAKAALTVMQRACVVPKPGDYENMQSVQARVHRSPILWAMYADYEECCGTVESCRKVYD 512

Query:   885 LAFQANPNSEEIWLAAVKLESENNEY 910
                +    S ++ +    +  E NEY
Sbjct:   513 KMIELRVASPQM-IMNYAMFLEENEY 537


>POMBASE|SPBC211.02c [details] [associations]
            symbol:cwf3 "complexed with Cdc5 protein Cwf3"
            species:4896 "Schizosaccharomyces pombe" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0044732 "mitotic spindle
            pole body" evidence=IDA] [GO:0045292 "mRNA cis splicing, via
            spliceosome" evidence=IC] InterPro:IPR003107 InterPro:IPR008847
            InterPro:IPR011990 Pfam:PF05843 SMART:SM00386 PomBase:SPBC211.02c
            GO:GO:0005829 GO:GO:0044732 EMBL:CU329671 GenomeReviews:CU329671_GR
            GO:GO:0005681 GO:GO:0007049 Gene3D:1.25.40.10 GO:GO:0045292
            eggNOG:NOG289100 KO:K12867 OMA:PRSYKLW HOGENOM:HOG000176133
            OrthoDB:EOG4DBXP7 EMBL:AF251149 PIR:T50337 RefSeq:NP_596612.1
            ProteinModelPortal:Q9P7R9 IntAct:Q9P7R9 STRING:Q9P7R9
            EnsemblFungi:SPBC211.02c.1 GeneID:2540753 KEGG:spo:SPBC211.02c
            NextBio:20801873 Uniprot:Q9P7R9
        Length = 790

 Score = 93 (37.8 bits), Expect = 0.00072, Sum P(3) = 0.00072
 Identities = 37/183 (20%), Positives = 82/183 (44%)

Query:   933 SEEIWLAAVKLESENNEYEXXXXXXXXXXX-SAPTPRVMIQSAKLEWCLDNLERALQLLD 991
             S +IW+  + LE      E               TP+V++  A L       E + ++ +
Sbjct:   479 SSKIWMYYLDLEESVGTIETTRKLYDRVFELKIATPQVVVNYANLLEENAYFEDSFKIYE 538

Query:   992 EAIKVF--PDFAKLW---MMKGQIEEQKNLLDKAHDTFSQAIKKCP--HSVPLWIMLANL 1044
               + +F  P   +LW   + K     Q   +++  D F QA++ CP   S  ++++ A+ 
Sbjct:   539 RGVALFSYPVAFELWNLYLTKFVKRYQGTHMERTRDLFEQALEGCPPEFSKSIYLLYADF 598

Query:  1045 EERRKMLIKARSVLEKG--RLRNPNCAELW-LAAIRVEIRAGLKDIANTMMAKALQECPN 1101
             EE+     ++ S+LEK   +++  +   ++ +  ++V +  G+     T+  KA++   +
Sbjct:   599 EEKFGKAKRSISILEKAADKVKTADRLAIYNVLLVKVALNYGVL-ATRTVYEKAIESLSD 657

Query:  1102 AGI 1104
             + +
Sbjct:   658 SEV 660

 Score = 66 (28.3 bits), Expect = 0.00072, Sum P(3) = 0.00072
 Identities = 12/46 (26%), Positives = 26/46 (56%)

Query:   576 PTSVRIWIKAADLETETKAKRRV--YRKALEHIPNSVRLWKAAVEL 619
             P S++ W++       +  ++RV  + +A   +P S ++WK+ +EL
Sbjct:    29 PYSLKSWLRYIKTHEGSTLEKRVLLFERACSELPGSYKIWKSYLEL 74

 Score = 63 (27.2 bits), Expect = 0.00072, Sum P(3) = 0.00072
 Identities = 51/228 (22%), Positives = 89/228 (39%)

Query:   641 ELWLALA----RLETYENARKVLNKARENIPTDRQ---IWTTAAKLEEAHGNNAMVDKII 693
             +LW  LA    R+  YE AR    +   NI T R    I+    + EE    +A V+   
Sbjct:   255 KLWTYLAQYYIRIGDYEKARSTFYEGMNNIMTVRNFTIIFDAFVEFEE-QWLSARVEASS 313

Query:   694 DRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDA 753
               A   LS   ++ +   W ++ ++      ++    L+R  I   V++  R+  ++ED 
Sbjct:   314 GNANDELS---IDFHMA-WLEKILDKRP---LYINDVLLRQNIN-NVDEWLRRVKFLEDD 365

Query:   754 ESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKS 813
                  Q   +  + +  + LA   S   ++   A F +N    E    + +KA  H P  
Sbjct:   366 SEKVVQVYTDAIKNVNPK-LA-HGSLGKLFSEFARFYENFDDLEQSRIIFEKAT-HVPYK 422

Query:   814 EVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEV 861
              V       +    +W+  A  E  H   ++   L+  AV    KS +
Sbjct:   423 TV-------NELAQVWIDWAEMELRHQNFDAARKLIGDAVHAPRKSHI 463


>UNIPROTKB|E1C8G8 [details] [associations]
            symbol:PRPF39 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0006396 "RNA processing" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003107
            InterPro:IPR011990 SMART:SM00386 GO:GO:0005634 GO:GO:0006396
            Gene3D:1.25.40.10 GeneTree:ENSGT00390000005033 OMA:GWVYLLQ
            EMBL:AADN02004089 IPI:IPI00598251 Ensembl:ENSGALT00000020376
            Uniprot:E1C8G8
        Length = 628

 Score = 124 (48.7 bits), Expect = 0.00073, P = 0.00073
 Identities = 102/462 (22%), Positives = 164/462 (35%)

Query:   564 ARAVIAQAVRHIPTSVRIWIKAADLETE---TKAKRRVYRKALEHIPNSVRLW------- 613
             AR    +   H P     W K ADLE      K    VYR+ L+ IP SV LW       
Sbjct:    74 ARKAFDKFFTHYPYCYGYWKKYADLERRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFL 133

Query:   614 KAAVELEDPE---DARILLSRAVECCPT---SVELWLALARLETYE-NARKVLNKARENI 666
             K  ++ +DPE     R     AV    T   S  LW      E  + N R+V +     +
Sbjct:   134 KDTLDPDDPEANSTIRGAYEHAVLAAGTDFRSDRLWEMYINWEDEQGNLREVTSIYDRIL 193

Query:   667 PTDRQIWTTAAKLEEAH-GNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSV 725
                 Q+++   +  + H  NN   D +       L      +N  H   +A   +   S 
Sbjct:   194 GIPTQLYSHHFQRFKDHVQNNLPRDLLTSEQFIQLRRELASVNG-HAGGDASAGDDLPSG 252

Query:   726 HTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECA-RAIYAQALAT--F---PSK 779
                      +I    E E+ +H  +E  +   N   +E + R  + + +    F   P +
Sbjct:   253 TEDITDPAKLI---TEIENMRHRIIEIHQEMFNHNEHEVSKRWTFEEGIKRPYFHVKPLE 309

Query:   780 KSI---WLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFE 836
             K+    W     FE  +GT E +  L ++ V  C   E  W+  AK           Y E
Sbjct:   310 KAQLKNWKEYLEFEIENGTHERVVVLFERCVISCALYEDFWIKYAK-----------YME 358

Query:   837 KNHGTRESLETLLQKAVA-HCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEE 895
              NH   E +  +  +A   H PK  ++ ++ A  +   G++  AR IL    +       
Sbjct:   359 -NHSI-EGVRHVYSRACTIHLPKKPMVHMLWAAFEEQQGNIDEARRILKTFEECILGLAM 416

Query:   896 IWLAAVKLESENNEYEXXXXXXXXXXXXXXXXXXNPNSEEIWLAAVKLESENNEYEXXXX 955
             + L  V LE  +   E                  + +   I LA    + + N  +    
Sbjct:   417 VRLRRVSLERRHGNMEEAERLLEEAVRNAKSVSES-SFYAIKLARHLFKVQKNLPKARKV 475

Query:   956 XXXXXXXSAPTPRVMIQSAKLEWCLD---NLERALQLLDEAI 994
                         ++ +   ++E+C D   N E  L   D+A+
Sbjct:   476 LSDAIEIDKENTKLYLNLLEMEYCGDLTQNEENILSCFDKAV 517


>CGD|CAL0004743 [details] [associations]
            symbol:orf19.332 species:5476 "Candida albicans" [GO:0071007
            "U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071004
            "U2-type prespliceosome" evidence=IEA] [GO:0071006 "U2-type
            catalytic step 1 spliceosome" evidence=IEA] [GO:0071008 "U2-type
            post-mRNA release spliceosomal complex" evidence=IEA] [GO:0000785
            "chromatin" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
            [GO:0000354 "cis assembly of pre-catalytic spliceosome"
            evidence=IEA] [GO:0006270 "DNA replication initiation"
            evidence=IEA] [GO:0003688 "DNA replication origin binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            InterPro:IPR003107 InterPro:IPR008847 InterPro:IPR011990
            Pfam:PF05843 SMART:SM00386 GO:GO:0008380 GO:GO:0006397
            GO:GO:0005681 GO:GO:0007049 Gene3D:1.25.40.10 EMBL:AACQ01000027
            EMBL:AACQ01000026 RefSeq:XP_720027.1 RefSeq:XP_720159.1
            ProteinModelPortal:Q5AED6 STRING:Q5AED6 GeneID:3638214
            GeneID:3638364 KEGG:cal:CaO19.332 KEGG:cal:CaO19.7964
            eggNOG:NOG327505 KO:K12869 Uniprot:Q5AED6
        Length = 758

 Score = 128 (50.1 bits), Expect = 0.00075, Sum P(2) = 0.00075
 Identities = 40/145 (27%), Positives = 63/145 (43%)

Query:   977 EWCLDN---LERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPH 1033
             +W ++N     RA  +L+ A+ V       W+   Q+E     ++ A +   +AI   P 
Sbjct:   128 KWEIENNHDFPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLPR 187

Query:  1034 SVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMA 1093
                LW +    EE  K     R+V E+    +P+ + +W A I  E R   K+   T+  
Sbjct:   188 VNKLWFLYVQTEEMLKNYPMVRAVFERWLDWHPDTS-VWDAYINFEARYEEKENVRTIFK 246

Query:  1094 KALQECPNAGILWAEAIFLEPRPQR 1118
             K + E PNAG  W + I  E    R
Sbjct:   247 KYVHEFPNAGT-WYKWIKYEMENNR 270

 Score = 47 (21.6 bits), Expect = 0.00075, Sum P(2) = 0.00075
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query:  1213 DAWAYFYKFEIINGTEETQAEVKKR 1237
             +AW     FE +NG++E+ ++V KR
Sbjct:   688 EAWR---DFEEVNGSDESLSKVTKR 709


>FB|FBgn0039600 [details] [associations]
            symbol:CG1646 species:7227 "Drosophila melanogaster"
            [GO:0005685 "U1 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
            via spliceosome" evidence=ISS] [GO:0005634 "nucleus" evidence=IC]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IMP] InterPro:IPR003107 InterPro:IPR011990
            SMART:SM00386 InterPro:IPR001623 EMBL:AE014297 Gene3D:1.25.40.10
            SMART:SM00271 GO:GO:0000398 GO:GO:0000381 eggNOG:COG5107
            GO:GO:0005685 GeneTree:ENSGT00390000005033 KO:K13217 EMBL:AY051737
            RefSeq:NP_001097957.1 RefSeq:NP_001097958.1 RefSeq:NP_651634.1
            RefSeq:NP_733256.2 RefSeq:NP_788753.1 RefSeq:NP_788754.2
            UniGene:Dm.31288 ProteinModelPortal:Q7KRW8 SMR:Q7KRW8 IntAct:Q7KRW8
            MINT:MINT-820225 STRING:Q7KRW8 PaxDb:Q7KRW8 PRIDE:Q7KRW8
            EnsemblMetazoa:FBtr0085322 GeneID:43399 KEGG:dme:Dmel_CG1646
            UCSC:CG1646-RB FlyBase:FBgn0039600 InParanoid:Q7KRW8 OMA:IRWENES
            OrthoDB:EOG4ZKH2F PhylomeDB:Q7KRW8 GenomeRNAi:43399 NextBio:833726
            Bgee:Q7KRW8 Uniprot:Q7KRW8
        Length = 1066

 Score = 99 (39.9 bits), Expect = 0.00077, Sum P(2) = 0.00077
 Identities = 53/226 (23%), Positives = 92/226 (40%)

Query:   984 ERALQLLDEAIKVFPDFAKLW--MMK--GQIEEQKNLLDKAHDTFSQAIK-KCPHSVPLW 1038
             ER L L +  +     + + W  M++    +E+Q  ++D   D + +A +   P    L 
Sbjct:   722 ERVLVLFERCLIACALYDEFWLKMLRYLESLEDQSGVVDLVRDVYRRACRIHHPDKPSLH 781

Query:  1039 IMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQE 1098
             +M A  EE +     A  +L++   R PN  +L    I VE R G  D    +    ++ 
Sbjct:   782 LMWAAFEECQMNFDDAAEILQRIDQRCPNLLQLSYRRINVERRRGALDKCRELYKHYIES 841

Query:  1099 CPNAGILWAEAI----FLEPRPQRKTKSVDALKKC-EHDP-HVLLAVSKLFWCENKNQKC 1152
               N GI  + AI    FL          + AL++  E DP +  +A+  +  C  +    
Sbjct:   842 TKNKGIAGSLAIKYARFLNKICHDLDAGLAALQQALERDPANTRVALQMIDLCLQRP--- 898

Query:  1153 HRSGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCR 1198
              +   +  + +  K + A    E D  VL A  K+ + E+     R
Sbjct:   899 -KVDEQEVVEIMDKFM-ARADIEPDQKVLFAQRKVEFLEDFGSTAR 942

 Score = 80 (33.2 bits), Expect = 0.00077, Sum P(2) = 0.00077
 Identities = 21/82 (25%), Positives = 36/82 (43%)

Query:   570 QAVRHIPTSVRIW---IKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEDPEDAR 626
             +AV+   T    W   ++  D E++ +A R  Y   L H P     W+   + E  +  +
Sbjct:   370 RAVKEDSTDFTGWTYLLQYVDNESDAEAAREAYDTFLSHYPYCYGYWRKYADYEKRKGIK 429

Query:   627 I----LLSRAVECCPTSVELWL 644
                  +  R +E  P SV+LW+
Sbjct:   430 ANCYKVFERGLEAIPLSVDLWI 451

 Score = 80 (33.2 bits), Expect = 0.00077, Sum P(2) = 0.00077
 Identities = 24/89 (26%), Positives = 39/89 (43%)

Query:   740 VEQEDRKHT-WMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRES 798
             V+++    T W    +   N+   E AR  Y   L+ +P     W + A +EK  G + +
Sbjct:   372 VKEDSTDFTGWTYLLQYVDNESDAEAAREAYDTFLSHYPYCYGYWRKYADYEKRKGIKAN 431

Query:   799 LETLLQKAVAHCPKSEVLW---LMGAKSN 824
                + ++ +   P S  LW   LM  KSN
Sbjct:   432 CYKVFERGLEAIPLSVDLWIHYLMHVKSN 460


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0     1278      1159   0.00093  123 3  11 22  0.43    34
                                                     38  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  45
  No. of states in DFA:  631 (67 KB)
  Total size of DFA:  565 KB (2250 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  97.79u 0.12s 97.91t   Elapsed:  00:01:07
  Total cpu time:  97.86u 0.12s 97.98t   Elapsed:  00:01:09
  Start:  Thu Aug 15 14:39:05 2013   End:  Thu Aug 15 14:40:14 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with CG6841 CG6841 CG6841	protein from Drosophila melanogaster	5.2e-255
BLAST match view associations BLAST with prpf6 prpf6 prpf6 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)	gene_product from Danio rerio	2.0e-221
BLAST match view associations BLAST with PRPF6 PRPF6 PRPF6 Uncharacterized protein	protein from Gallus gallus	8.8e-205
BLAST match view associations BLAST with PRPF6 PRPF6 PRPF6 Pre-mRNA-processing factor 6	protein from Bos taurus	1.8e-204
BLAST match view associations BLAST with PRPF6 PRPF6 PRPF6 Uncharacterized protein	protein from Canis lupus familiaris	1.8e-204
BLAST match view associations BLAST with Prpf6 Prpf6 Prpf6 PRP6 pre-mRNA splicing factor 6 homolog (yeast)	protein from Mus musculus	3.8e-204
BLAST match view associations BLAST with Prpf6 Prpf6 Prpf6 pre-mRNA processing factor 6	gene from Rattus norvegicus	3.8e-204
BLAST match view associations BLAST with PRPF6 PRPF6 PRPF6 Pre-mRNA-processing factor 6	protein from Homo sapiens	4.9e-204
BLAST match view associations BLAST with I3L7Q4 I3L7Q4 I3L7Q4 Uncharacterized protein	protein from Sus scrofa	5.0e-203
BLAST match view associations BLAST with prpf6 prpf6 prpf6 pre-mRNA processing factor 6	gene from Dictyostelium discoideum	2.1e-180
BLAST match view associations BLAST with prp-6 prp-6 prp-6	gene from Caenorhabditis elegans	5.8e-163
BLAST match view associations BLAST with EMB2770 EMB2770 EMB2770 EMBRYO DEFECTIVE 2770	protein from Arabidopsis thaliana	1.6e-159
BLAST match view associations BLAST with orf19.6356 orf19.6356 orf19.6356	gene_product from Candida albicans	7.0e-74
BLAST match view associations BLAST with PRP6 PRP6 PRP6 Putative uncharacterized protein PRP6	protein from Candida albicans SC5314	7.0e-74
BLAST match view associations BLAST with PRP6 PRP6 PRP6 Splicing factor	gene from Saccharomyces cerevisiae	8.7e-70
BLAST match view associations BLAST with M03F8.3 M03F8.3 M03F8.3	gene from Caenorhabditis elegans	2.8e-14
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Crooked neck-like protein 1	protein from Homo sapiens	6.4e-12
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Crooked neck-like protein 1	protein from Homo sapiens	6.7e-12
BLAST match view associations BLAST with crnkl1 crnkl1 crnkl1 crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	gene_product from Danio rerio	2.1e-11
BLAST match view associations BLAST with AT3G13210 AT3G13210 AT3G13210	protein from Arabidopsis thaliana	6.8e-11
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Uncharacterized protein	protein from Canis lupus familiaris	1.0e-10
BLAST match view associations BLAST with Crnkl1 Crnkl1 Crnkl1 Crn, crooked neck-like 1 (Drosophila)	protein from Mus musculus	1.4e-10
BLAST match view associations BLAST with Crnkl1 Crnkl1 Crnkl1 crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	gene from Rattus norvegicus	1.4e-10
BLAST match view associations BLAST with HCF107 HCF107 HCF107 high chlorophyll fluorescent 107	protein from Arabidopsis thaliana	1.6e-10
BLAST match view associations BLAST with AT5G41770 AT5G41770 AT5G41770	protein from Arabidopsis thaliana	3.7e-10
BLAST match view associations BLAST with BGAL14 BGAL14 BGAL14 AT4G38590	protein from Arabidopsis thaliana	4.6e-10
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Uncharacterized protein	protein from Gallus gallus	7.4e-10
BLAST match view associations BLAST with DDB_G0280363 DDB_G0280363 DDB_G0280363	gene from Dictyostelium discoideum	1.2e-08
BLAST match view associations BLAST with crn crn crn crooked neck	protein from Drosophila melanogaster	1.6e-07
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Uncharacterized protein	protein from Bos taurus	6.2e-06
BLAST match view associations BLAST with DDB_G0278819 DDB_G0278819 DDB_G0278819 HAT repeat-containing protein	gene from Dictyostelium discoideum	9.8e-06
BLAST match view associations BLAST with CRNKL1 CRNKL1 CRNKL1 Uncharacterized protein	protein from Canis lupus familiaris	4.0e-05
BLAST match view associations BLAST with AT3G51110 AT3G51110 AT3G51110	protein from Arabidopsis thaliana	5.2e-05
BLAST match view associations BLAST with AT5G45990 AT5G45990 AT5G45990	protein from Arabidopsis thaliana	0.00023
BLAST match view associations BLAST with prpf39 prpf39 prpf39 PRP39 pre-mRNA processing factor 39 homolog (yeast)	gene_product from Danio rerio	0.00056
BLAST match view associations BLAST with C50F2.3 C50F2.3 C50F2.3	gene from Caenorhabditis elegans	0.00058
BLAST match view associations BLAST with C50F2.3 C50F2.3 C50F2.3 Protein C50F2.3	protein from Caenorhabditis elegans	0.00058
BLAST match view associations BLAST with PRPF39 PRPF39 PRPF39 Uncharacterized protein	protein from Gallus gallus	0.00073
BLAST match view associations BLAST with orf19.332 orf19.332 orf19.332	gene_product from Candida albicans	0.00075
BLAST match view associations BLAST with CG1646 CG1646 CG1646	protein from Drosophila melanogaster	0.00077