RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3224
(1278 letters)
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa
subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 308
Score = 84.6 bits (208), Expect = 4e-18
Identities = 38/289 (13%), Positives = 82/289 (28%), Gaps = 40/289 (13%)
Query: 828 IWLRAAYFEKNHGTRESLETLLQ--------KAVAHCPKSEVLWLMGAKSKWLAGDVPAA 879
+W + +EK++ R +TL+ + + +W A+ + + A
Sbjct: 10 MWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAE 69
Query: 880 RGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLA 939
+G + A + + N YERA L + ++ A
Sbjct: 70 KGDM-------------NNAKLFSDEAANIYERAISTL------------LKKNMLLYFA 104
Query: 940 AVKLESENNEYERARRLLAKARA--SAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVF 997
E +YE+ + + A V IQ K + ++ + +A +
Sbjct: 105 YADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA 164
Query: 998 PDFAKLWMMKGQIEEQKNL-LDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARS 1056
+++ +E + A F +KK + + R
Sbjct: 165 RTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRV 224
Query: 1057 VLEKGRLRNP----NCAELWLAAIRVEIRAGLKDIANTMMAKALQECPN 1101
+ E+ E+W + E G + +
Sbjct: 225 LFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFRE 273
Score = 80.8 bits (198), Expect = 6e-17
Identities = 33/274 (12%), Positives = 73/274 (26%), Gaps = 46/274 (16%)
Query: 578 SVRIWIKAADLETETKAK-----------RRVYRKALEHIPNSVRLWKAAVELED----- 621
V +W K E + Y + L + + +W A + +
Sbjct: 7 QVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKL 66
Query: 622 -------------PEDARILLSRAVE-CCPTSVELWLALARLE----TYENARKVLNKAR 663
++A + RA+ ++ L+ A A E YE + N+
Sbjct: 67 LAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLL 126
Query: 664 E-NIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKA 722
++ K I +A + +K+
Sbjct: 127 AIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKS 186
Query: 723 GSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSK--- 779
+ + ++ D + + ++ R ++ + L +
Sbjct: 187 VAFKIFELGLKKYG-------DIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK 239
Query: 780 -KSIWLRAAYFEKNHGTRESLETLLQKAVAHCPK 812
IW R FE N G S+ + ++ +
Sbjct: 240 SGEIWARFLAFESNIGDLASILKVEKRRFTAFRE 273
Score = 75.0 bits (183), Expect = 6e-15
Identities = 30/256 (11%), Positives = 75/256 (29%), Gaps = 26/256 (10%)
Query: 895 EIWLAAVKLESENNEYERARRLLAKARAQA---GAFQANPNSEEIWLAAVKLESENNEYE 951
++W ++ E N + L+ R + +IW A + ++++
Sbjct: 9 DMWKKYIQWEKSNPLRTEDQTLI-TKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLL 67
Query: 952 RARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVF-PDFAKLWMMKGQI 1010
+ + A+ + A + + AI L+
Sbjct: 68 AEKGDMNNAKL-------------------FSDEAANIYERAISTLLKKNMLLYFAYADY 108
Query: 1011 EEQKNLLDKAHDTFSQAIKK-CPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCA 1069
EE + +K H +++ + ++I R + + R + +K R
Sbjct: 109 EESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRH 168
Query: 1070 ELWLAAIRVEIRAGL-KDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALKK 1128
+++ A +E K +A + L++ + I + ++
Sbjct: 169 HVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFER 228
Query: 1129 CEHDPHVLLAVSKLFW 1144
+ S W
Sbjct: 229 VLTSGSLPPEKSGEIW 244
Score = 73.9 bits (180), Expect = 2e-14
Identities = 41/263 (15%), Positives = 84/263 (31%), Gaps = 34/263 (12%)
Query: 1009 QIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEER--------------RKMLIKA 1054
+ E+Q + + + Q + H +W A E+ + +A
Sbjct: 24 RTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEA 83
Query: 1055 RSVLEKG-RLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQ-ECPNAGILWAEAIFL 1112
++ E+ L+ A E + +++ + L E + +++ + +
Sbjct: 84 ANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKF 143
Query: 1113 EPRPQRKTKSV----DALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSV 1168
R + A + HV + + + + +K++
Sbjct: 144 ARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELG-------- 195
Query: 1169 DALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDP----DLGDAWAYFYKFEII 1224
LKK P +LA N++ R F R + G+ WA F FE
Sbjct: 196 --LKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESN 253
Query: 1225 NGTEETQAEVKKRCLAAEPKHGE 1247
G + +V+KR A + E
Sbjct: 254 IGDLASILKVEKRRFTAFREEYE 276
Score = 63.5 bits (153), Expect = 4e-11
Identities = 34/240 (14%), Positives = 69/240 (28%), Gaps = 41/240 (17%)
Query: 765 ARAIYAQALATFPSKKSIWLRAAYFEKNHGTR--------------ESLETLLQKAV-AH 809
Y Q L IW AA + + + + ++A+
Sbjct: 35 VMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL 94
Query: 810 CPKSEVLWLMGAK-----------------------SNKKSIWLRAAYFEKNHGTRESLE 846
K+ +L+ A + ++++ F + +S
Sbjct: 95 LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGR 154
Query: 847 TLLQKAVAHCPKSEVLWLMGAKSKW-LAGDVPAARGILSLAFQANPNSEEIWLAAVKLES 905
+ +KA +++ A ++ + D A I L + + E LA + S
Sbjct: 155 MIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214
Query: 906 ENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAP 965
NE R L + S EIW + ES + ++ + +
Sbjct: 215 HLNEDNNTRVLFERVLTSGSL--PPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFR 272
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human
(Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 80.1 bits (196), Expect = 3e-16
Identities = 57/369 (15%), Positives = 108/369 (29%), Gaps = 17/369 (4%)
Query: 750 MEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAH 809
ME A G +E A Q P + L + + A+
Sbjct: 3 MELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQ 62
Query: 810 CPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKS 869
P + K+ L+ A H R + + + GA
Sbjct: 63 NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQ 122
Query: 870 KWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESE-----NNEYERARRLLAKARAQA 924
+++ + N L K + A L
Sbjct: 123 AYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQ 182
Query: 925 G-----------AFQANPNSEEIWLAAVKLESENNEYERARRLLAKARA-SAPTPRVMIQ 972
G A +PN + ++ + E ++RA +A + S V
Sbjct: 183 GEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGN 242
Query: 973 SAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCP 1032
A + + ++ A+ AI++ P F + ++K + +A D ++ A++ CP
Sbjct: 243 LACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCP 302
Query: 1033 HSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMM 1092
LAN++ + + +A + K P A V + G A
Sbjct: 303 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHY 362
Query: 1093 AKALQECPN 1101
+A++ P
Sbjct: 363 KEAIRISPT 371
Score = 77.4 bits (189), Expect = 2e-15
Identities = 50/400 (12%), Positives = 112/400 (28%), Gaps = 29/400 (7%)
Query: 652 YENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREH 711
+E A + + P + + + + +DR+ H
Sbjct: 15 FEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRR-------LDRSA-------------H 54
Query: 712 WFKEAIEAE-KAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYA 770
+ AI+ ++ + G E + + + A + A
Sbjct: 55 FSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAA 114
Query: 771 QALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWL 830
+ L+ + + + + + +
Sbjct: 115 GDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSN 174
Query: 831 RAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQAN 890
F ++ +KAV P ++ A A A +
Sbjct: 175 LGCVFNAQGEIWLAIH-HFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 233
Query: 891 PNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEY 950
PN + + E + A +A + P+ + + E
Sbjct: 234 PNHAVVHGNLACVYYEQGLIDLAIDTYRRA------IELQPHFPDAYCNLANALKEKGSV 287
Query: 951 ERARRLLAKARASAPTPRVMIQS-AKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQ 1009
A A PT + + A ++ N+E A++L +A++VFP+FA
Sbjct: 288 AEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLAS 347
Query: 1010 IEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRK 1049
+ +Q+ L +A + +AI+ P + + N + +
Sbjct: 348 VLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 387
Score = 68.9 bits (167), Expect = 1e-12
Identities = 56/374 (14%), Positives = 120/374 (32%), Gaps = 20/374 (5%)
Query: 846 ETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLES 905
E + P + + L+ + + + + +LA + NP E + +
Sbjct: 19 ERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYK 78
Query: 906 ENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAP 965
E + + A A F + L A + + + +
Sbjct: 79 ERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSAL-----QYNPD 133
Query: 966 TPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFS 1025
V L L LE A +AI+ P+FA W G + + + A F
Sbjct: 134 LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFE 193
Query: 1026 QAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLK 1085
+A+ P+ + +I L N+ + ++ +A + + +PN A + V GL
Sbjct: 194 KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLI 253
Query: 1086 DIANTMMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWC 1145
D+A +A++ P+ + ++ D
Sbjct: 254 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALR-----------LCP 302
Query: 1146 ENKNQKCHRSGSRRCMGVKTKSVDALKKC----EHDPHVLLAVSKLFWCENKNQKCREWF 1201
+ + + + +R G ++V +K ++ + + K Q+ +
Sbjct: 303 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHY 362
Query: 1202 NRTVKIDPDLGDAW 1215
++I P DA+
Sbjct: 363 KEAIRISPTFADAY 376
Score = 68.2 bits (165), Expect = 2e-12
Identities = 47/383 (12%), Positives = 109/383 (28%), Gaps = 32/383 (8%)
Query: 713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQA 772
+ A +AG + + ++ D + + + + A
Sbjct: 3 MELAHREYQAGDFEAAERHCMQLWR---QEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLA 59
Query: 773 LATFPSKKSIWLRAA----------------------YFEKNHGTRESLETLLQKAVAHC 810
+ P + + G L+
Sbjct: 60 IKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG 119
Query: 811 PKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSK 870
+ + + + K G E + KA+ P V W
Sbjct: 120 AVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVF 179
Query: 871 WLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQAN 930
G++ A A +PN + ++ + E ++RA +A +
Sbjct: 180 NAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRA------LSLS 233
Query: 931 PNSEEIWLAAVKLESENNEYERARRLLAKARASAPT-PRVMIQSAKLEWCLDNLERALQL 989
PN + + E + A +A P P A ++ A
Sbjct: 234 PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDC 293
Query: 990 LDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRK 1049
+ A+++ P A I+ ++ +++A + +A++ P LA++ +++
Sbjct: 294 YNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 353
Query: 1050 MLIKARSVLEKGRLRNPNCAELW 1072
L +A ++ +P A+ +
Sbjct: 354 KLQEALMHYKEAIRISPTFADAY 376
Score = 67.4 bits (163), Expect = 4e-12
Identities = 45/374 (12%), Positives = 104/374 (27%), Gaps = 26/374 (6%)
Query: 597 RVYRKALEHIPNSVRLW----KAAVELEDPEDARILLSRAVECCPTSVELWLALARLETY 652
R + P++ + + + + + A++ P E + L +
Sbjct: 20 RHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKE 79
Query: 653 ENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHW 712
+ + + + + A A + +A + ++ N + +
Sbjct: 80 RGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQA----YVSALQYNPDLY 135
Query: 713 FKEAIEAEKAGSVHTCQALIRAIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQA 772
+ ++ + + Q + W QG A + +A
Sbjct: 136 CVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKA 195
Query: 773 LATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKSIWLRA 832
+ P+ ++ K + +AVA ++ L A +
Sbjct: 196 VTLDPNFLDAYINLGNVLKEAR-------IFDRAVAAYLRALSLSPNHAV-----VHGNL 243
Query: 833 AYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPN 892
A G + ++A+ P + A + G V A + A + P
Sbjct: 244 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 303
Query: 893 SEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYER 952
+ ++ E E A RL K A + P + + + +
Sbjct: 304 HADSLNNLANIKREQGNIEEAVRLYRK------ALEVFPEFAAAHSNLASVLQQQGKLQE 357
Query: 953 ARRLLAKARASAPT 966
A +A +PT
Sbjct: 358 ALMHYKEAIRISPT 371
Score = 53.1 bits (126), Expect = 1e-07
Identities = 46/326 (14%), Positives = 102/326 (31%), Gaps = 16/326 (4%)
Query: 946 ENNEYERARRLLAKARASAPT-PRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLW 1004
+ ++E A R + P V++ + + + L+R+ AIK P A+ +
Sbjct: 11 QAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAY 70
Query: 1005 MMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLR 1064
G + +++ L +A + + A++ P + +I LA + A
Sbjct: 71 SNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQY 130
Query: 1065 NPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILW----AEAIFLEPRPQRKT 1120
NP+ + + G + A KA++ PN + W
Sbjct: 131 NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIH 190
Query: 1121 KSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHV 1180
A+ + + + + + + R +L H
Sbjct: 191 HFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRAL---------SLSPNHAVVHG 241
Query: 1181 LLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLA 1240
LA +++ + + + R +++ P DA+ G+ + L
Sbjct: 242 NLAC--VYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALR 299
Query: 1241 AEPKHGENWCRVAKNVSNWKLPRETI 1266
P H ++ +A E +
Sbjct: 300 LCPTHADSLNNLANIKREQGNIEEAV 325
Score = 51.6 bits (122), Expect = 3e-07
Identities = 34/265 (12%), Positives = 75/265 (28%), Gaps = 13/265 (4%)
Query: 1008 GQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPN 1067
E Q + A Q ++ P + + ++L+++ + + L ++ +NP
Sbjct: 6 AHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPL 65
Query: 1068 CAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALK 1127
AE + + + + ++ A
Sbjct: 66 LAEAYS----------NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAG 115
Query: 1128 KCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKL 1187
E ++ + + + + ++ LK E P+ +A S L
Sbjct: 116 DMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNL 175
Query: 1188 ---FWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCLAAEPK 1244
F + + F + V +DP+ DA+ + R L+ P
Sbjct: 176 GCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPN 235
Query: 1245 HGENWCRVAKNVSNWKLPRETILSL 1269
H +A L I +
Sbjct: 236 HAVVHGNLACVYYEQGLIDLAIDTY 260
Score = 49.7 bits (117), Expect = 2e-06
Identities = 32/208 (15%), Positives = 59/208 (28%), Gaps = 15/208 (7%)
Query: 493 DINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLW 552
+I A + +PN A+I + + A ++ + +
Sbjct: 181 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 240
Query: 553 LEAA----RLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKR---RVYRKALEH 605
A +D A +A+ P + A+ E + Y AL
Sbjct: 241 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 300
Query: 606 IPNSV----RLWKAAVELEDPEDARILLSRAVECCPTSVELWLALA----RLETYENARK 657
P L E + E+A L +A+E P LA + + A
Sbjct: 301 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 360
Query: 658 VLNKARENIPTDRQIWTTAAKLEEAHGN 685
+A PT ++ + +
Sbjct: 361 HYKEAIRISPTFADAYSNMGNTLKEMQD 388
Score = 41.6 bits (96), Expect = 5e-04
Identities = 37/203 (18%), Positives = 63/203 (31%), Gaps = 15/203 (7%)
Query: 511 NPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAARLQPV----DTARA 566
PN AW + G++ A + K + D ++ + D A A
Sbjct: 165 QPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVA 224
Query: 567 VIAQAVRHIPTSVRIWIKAADLETETK---AKRRVYRKALEHIPNSVRLW----KAAVEL 619
+A+ P + A + E YR+A+E P+ + A E
Sbjct: 225 AYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEK 284
Query: 620 EDPEDARILLSRAVECCPTSVE----LWLALARLETYENARKVLNKARENIPTDRQIWTT 675
+A + A+ CPT + L E A ++ KA E P +
Sbjct: 285 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSN 344
Query: 676 AAKLEEAHGNNAMVDKIIDRALS 698
A + + G A+
Sbjct: 345 LASVLQQQGKLQEALMHYKEAIR 367
Score = 41.6 bits (96), Expect = 5e-04
Identities = 26/227 (11%), Positives = 64/227 (28%), Gaps = 9/227 (3%)
Query: 1041 LANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECP 1100
LA+ E + A + + P+ + L + + D + A+++ P
Sbjct: 5 LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNP 64
Query: 1101 N-AGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRR 1159
A + R Q + P F N +
Sbjct: 65 LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPD--------FIDGYINLAAALVAAGD 116
Query: 1160 CMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFY 1219
G V AL+ V + L + ++ + + + ++ P+ AW+
Sbjct: 117 MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLG 176
Query: 1220 KFEIINGTEETQAEVKKRCLAAEPKHGENWCRVAKNVSNWKLPRETI 1266
G ++ + +P + + + + ++ +
Sbjct: 177 CVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 223
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 61.6 bits (149), Expect = 1e-10
Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 1/131 (0%)
Query: 982 NLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIML 1041
L++AL+LL EAIK P A L ++ ++A + Q+IK P +P L
Sbjct: 11 QLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQL 70
Query: 1042 ANLEERRKMLIKARSVL-EKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECP 1100
+L + + L L + + + + + + + + +
Sbjct: 71 RHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQ 130
Query: 1101 NAGILWAEAIF 1111
G L + F
Sbjct: 131 EKGFLANDTSF 141
Score = 45.0 bits (106), Expect = 3e-05
Identities = 20/147 (13%), Positives = 42/147 (28%), Gaps = 4/147 (2%)
Query: 613 WKAAVELEDPEDARILLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPT 668
WK A+ + A LL A++ P L + L +E A + L ++ + P
Sbjct: 3 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPE 62
Query: 669 DRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTC 728
+ L +A + A + + + + +
Sbjct: 63 YLPGASQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELA 122
Query: 729 QALIRAIIGYGVEQEDRKHTWMEDAES 755
+ G D + + D +
Sbjct: 123 LQIEELRQEKGFLANDTSFSDVRDIDD 149
Score = 44.3 bits (104), Expect = 5e-05
Identities = 12/145 (8%), Positives = 37/145 (25%), Gaps = 11/145 (7%)
Query: 753 AESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPK 812
++ ++G + A + +A+ P S+ G E + L +++ P+
Sbjct: 3 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPE 62
Query: 813 SEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSKWL 872
+ ++ + V + L+ +
Sbjct: 63 YLPGA-----------SQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMV 111
Query: 873 AGDVPAARGILSLAFQANPNSEEIW 897
+ D + + +
Sbjct: 112 SQDYEQVSELALQIEELRQEKGFLA 136
Score = 41.6 bits (97), Expect = 4e-04
Identities = 20/138 (14%), Positives = 46/138 (33%), Gaps = 8/138 (5%)
Query: 873 AGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPN 932
G + A +L A +A+P + + ++L + ++ERA L ++ + P
Sbjct: 9 EGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSI------KLFPE 62
Query: 933 SEEIW--LAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLL 990
L + ++ + AK + S L + E+ +L
Sbjct: 63 YLPGASQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELA 122
Query: 991 DEAIKVFPDFAKLWMMKG 1008
+ ++ + L
Sbjct: 123 LQIEELRQEKGFLANDTS 140
Score = 40.4 bits (94), Expect = 8e-04
Identities = 20/140 (14%), Positives = 34/140 (24%), Gaps = 5/140 (3%)
Query: 846 ETLLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLES 905
LL +A+ PK L + + GD A L + + P L
Sbjct: 16 LELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVK 75
Query: 906 ENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAP 965
+ A L + L + +YE+ L +
Sbjct: 76 AAQARKDFA-----QGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQ 130
Query: 966 TPRVMIQSAKLEWCLDNLER 985
+ D +R
Sbjct: 131 EKGFLANDTSFSDVRDIDDR 150
Score = 35.8 bits (82), Expect = 0.024
Identities = 14/118 (11%), Positives = 32/118 (27%), Gaps = 9/118 (7%)
Query: 596 RRVYRKALEHIPNSVRLW----KAAVELEDPEDARILLSRAVECCPTSVELWLALARL-- 649
+ +A++ P L + D E A L ++++ P + L L
Sbjct: 16 LELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVK 75
Query: 650 ---ETYENARKVLNKARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSANG 704
+ A+ + + L + V ++ + G
Sbjct: 76 AAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKG 133
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 57.1 bits (137), Expect = 8e-09
Identities = 27/263 (10%), Positives = 59/263 (22%), Gaps = 18/263 (6%)
Query: 886 AFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLES 945
A + + L ++ + + + + L +
Sbjct: 12 AEVLKADMTDSKLGPAEVWTSRQALQDLYQK---------MLVTDLEYALDKKVEQDLWN 62
Query: 946 E--NNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKL 1003
N+ + + S LE + LQ L V
Sbjct: 63 HAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVK 122
Query: 1004 WMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRL 1063
G I ++ S + + L ++ R +A S
Sbjct: 123 SSQLGIISNKQTHTSAIVKPQSSSCSYICQHC--LVHLGDIARYRNQTSQAESYYRHAAQ 180
Query: 1064 RNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQ-ECPNAGILWAEAIFLEPRPQRKTKS 1122
P+ + + + G +++ + P L + +S
Sbjct: 181 LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS----KALES 236
Query: 1123 VDALKKCEHDPHVLLAVSKLFWC 1145
D +K + A K
Sbjct: 237 RDEVKTKWGVSDFIKAFIKFHGH 259
Score = 42.1 bits (98), Expect = 4e-04
Identities = 22/272 (8%), Positives = 58/272 (21%), Gaps = 51/272 (18%)
Query: 986 ALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLE 1045
+ Q L +A + D + ++ + L + + + + +L
Sbjct: 5 SAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDL---YQKMLVTDLEYALDKKVEQDLW 61
Query: 1046 ERRKMLIKARSVLEKGRLRNPNCAELWLAAI---RVEIRAGLKDIANTMMAKALQECPNA 1102
+ L+ N + A +E +G +
Sbjct: 62 --NHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPC 119
Query: 1103 GILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMG 1162
+ ++ + + + V
Sbjct: 120 RVKSSQLGIISNKQTHTSAIVKPQSS---------------------------------- 145
Query: 1163 VKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFE 1222
+ V L + N+ + ++ ++ P G +
Sbjct: 146 -------SCSYICQHCLVHLGD--IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILA 196
Query: 1223 IINGTEETQAEVKKRCLAAEPKHGENWCRVAK 1254
G T R +A + + K
Sbjct: 197 SSKGDHLTTIFYYCRSIAVKFPFPAASTNLQK 228
Score = 29.0 bits (64), Expect = 4.2
Identities = 21/220 (9%), Positives = 56/220 (25%), Gaps = 12/220 (5%)
Query: 495 NDIKKARLLLKSVRETNPNHPPAWIASA---RLEEVTGKVQAARNLIMKGCEENQTSEDL 551
+ K L+ + N + + + LE +G + +
Sbjct: 63 HAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVK 122
Query: 552 W--LEAARLQPVDTARAVIAQAVRHIPTSVRIWIKAADL---ETETKAKRRVYRKALEHI 606
L + T+ V Q+ + D+ +T YR A + +
Sbjct: 123 SSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLV 182
Query: 607 PNSVRLWK----AAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLNKA 662
P++ + + A D R++ L + + + K
Sbjct: 183 PSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKT 242
Query: 663 RENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSSLSA 702
+ + + + + + + ++
Sbjct: 243 KWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKE 282
Score = 28.6 bits (63), Expect = 6.1
Identities = 22/218 (10%), Positives = 63/218 (28%), Gaps = 23/218 (10%)
Query: 499 KARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAA-RNLIM---KGCEENQTSEDLWLE 554
++ L+ + + + A + +Q + +++ + + + +DLW
Sbjct: 4 QSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNH 63
Query: 555 AARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLW- 613
A + + ++ R ++A A Y + L+ + +
Sbjct: 64 AFK-----NQITTLQGQAKNRANPNRSEVQANLSLFLEAASGF-YTQLLQELCTVFNVDL 117
Query: 614 ----------KAAVELEDPEDARILLSRAVECCPTSVELWL--ALARLETYENARKVLNK 661
+ + S + + L A
Sbjct: 118 PCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRH 177
Query: 662 ARENIPTDRQIWTTAAKLEEAHGNNAMVDKIIDRALSS 699
A + +P++ Q + A L + G++ R+++
Sbjct: 178 AAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 47.9 bits (112), Expect = 3e-06
Identities = 36/237 (15%), Positives = 64/237 (27%), Gaps = 7/237 (2%)
Query: 983 LERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLA 1042
L R Q+L + A+L +G + + L A + FSQA+ P ++ L
Sbjct: 19 LARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLG 78
Query: 1043 NLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNA 1102
+ A + +P L G +A + Q+ PN
Sbjct: 79 IYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPND 138
Query: 1103 GILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMG 1162
E + K + E + W + + S
Sbjct: 139 PFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDK-----EQWGWNIVEFYLGNISEQTLMER 193
Query: 1163 VKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFY 1219
+K + D EH + K + F V + + + Y
Sbjct: 194 LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVH--NFVEHRY 248
Score = 34.8 bits (78), Expect = 0.049
Identities = 29/244 (11%), Positives = 64/244 (26%), Gaps = 4/244 (1%)
Query: 791 KNHGTRESLETLLQKAVAHCPKSEVLWLMGAKSNKKS-IWLRAAYFEKNHGTRESLETLL 849
K+ L+ LQ+ V ++L ++++ + + G R
Sbjct: 1 KSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDF 60
Query: 850 QKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNE 909
+A+A P ++ AG+ AA + +P L
Sbjct: 61 SQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGR 120
Query: 910 YERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRV 969
+ A+ L + + + ++ K + +
Sbjct: 121 DKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQ---WGWNI 177
Query: 970 MIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIK 1029
+ +ER + + ++ G+ LD A F A+
Sbjct: 178 VEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVA 237
Query: 1030 KCPH 1033
H
Sbjct: 238 NNVH 241
Score = 29.0 bits (63), Expect = 3.3
Identities = 26/220 (11%), Positives = 56/220 (25%), Gaps = 9/220 (4%)
Query: 1037 LWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKAL 1096
L + L ++ +L + +L L + A+L + GL+ +A ++AL
Sbjct: 5 LAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQAL 64
Query: 1097 QECPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSG 1156
P+ E + + DA + L +
Sbjct: 65 AIRPD----MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGR 120
Query: 1157 SRRCMGVKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWA 1216
+ + +DP L + ++ Q K D +
Sbjct: 121 DKLAQDDLLA---FYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNI 177
Query: 1217 YFYKFEIINGTEETQAEVK--KRCLAAEPKHGENWCRVAK 1254
+ I+ + + E + K
Sbjct: 178 VEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGK 217
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 47.9 bits (112), Expect = 4e-06
Identities = 26/244 (10%), Positives = 64/244 (26%), Gaps = 10/244 (4%)
Query: 982 NLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIML 1041
+L A+ L + A++ P + W G + + A + ++ P + + L
Sbjct: 34 DLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMAL 93
Query: 1042 ANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVE-------IRAGLKDIANTMMAK 1094
A + +A +L P A L A + L + + +
Sbjct: 94 AVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFL 153
Query: 1095 ALQECPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHR 1154
++E A + + + + A + +
Sbjct: 154 EVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLG 213
Query: 1155 SGSRRCMGVKTKSVDALKKCEHDPHVLLAVSKLFWC---ENKNQKCREWFNRTVKIDPDL 1211
+ + + E P + + L +++ E F + +
Sbjct: 214 ATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 273
Query: 1212 GDAW 1215
Sbjct: 274 RGPR 277
Score = 43.3 bits (100), Expect = 1e-04
Identities = 32/265 (12%), Positives = 62/265 (23%), Gaps = 10/265 (3%)
Query: 1004 WMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRL 1063
+G Q+ L A F A+++ P + W L + + + A S L +
Sbjct: 22 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLE 81
Query: 1064 RNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKTKSV 1123
P+ +A L+ A ++ L+ P L A
Sbjct: 82 LKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKR 141
Query: 1124 DALKKCEHDPH-----VLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDALKKCEHDP 1178
+ LA +L G + +
Sbjct: 142 ILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSV 201
Query: 1179 HVLLAVSKLFWCENK-----NQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEETQAE 1233
+ +++ + R +++ P + I G E
Sbjct: 202 RPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVE 261
Query: 1234 VKKRCLAAEPKHGENWCRVAKNVSN 1258
L + K N
Sbjct: 262 HFLEALNMQRKSRGPRGEGGAMSEN 286
Score = 35.2 bits (79), Expect = 0.046
Identities = 32/270 (11%), Positives = 69/270 (25%), Gaps = 10/270 (3%)
Query: 749 WMEDAESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVA 808
E+ +G A ++ A+ P W + + + L++ +
Sbjct: 22 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLE 81
Query: 809 HCPKSEVLWLMGAKSNKKSIWLRAAYFE-----KNHGTRESLETLLQKAVAHCPKSEVLW 863
P ++ + A S R A + L T ++
Sbjct: 82 LKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKR 141
Query: 864 LMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQ 923
++G+ + ++ ++ L + + EY++A A +
Sbjct: 142 ILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSV 201
Query: 924 AGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNL 983
N LA E R L + + L
Sbjct: 202 RPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC-----INLGAH 256
Query: 984 ERALQLLDEAIKVFPDFAKLWMMKGQIEEQ 1013
A++ EA+ + G + E
Sbjct: 257 REAVEHFLEALNMQRKSRGPRGEGGAMSEN 286
Score = 29.8 bits (65), Expect = 2.2
Identities = 25/218 (11%), Positives = 49/218 (22%), Gaps = 12/218 (5%)
Query: 1034 SVPLWIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMA 1093
P + L A + E ++P E W + + +A + +
Sbjct: 18 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALR 77
Query: 1094 KALQ----ECPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKN 1149
+ L+ L + Q D L+ H++ +
Sbjct: 78 RCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLG 137
Query: 1150 QKCHRSGSRRCMGVKTKSVDALKK--------CEHDPHVLLAVSKLFWCENKNQKCREWF 1201
GS + + + + D L V E
Sbjct: 138 PSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTA 197
Query: 1202 NRTVKIDPDLGDAWAYFYKFEIINGTEETQAEVKKRCL 1239
+V+ + L E A + L
Sbjct: 198 ALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALEL 235
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 47.6 bits (112), Expect = 4e-06
Identities = 25/249 (10%), Positives = 71/249 (28%), Gaps = 5/249 (2%)
Query: 993 AIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLAN-LEERRKML 1051
I F ++ + ++ ++A AI+ + +W L+ +K L
Sbjct: 35 QIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDL 94
Query: 1052 IKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECP-NAGILWAEAI 1110
+ + + P ++W + +A L + N
Sbjct: 95 HEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQW 154
Query: 1111 FLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRRCMGVKTKSVDA 1170
++ + + + D ++ ++ + + +++
Sbjct: 155 VIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRA--VLEREVQYTLEM 212
Query: 1171 LKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEET 1230
+K H+ + + K N+ + + P + + +I E
Sbjct: 213 IKLVPHNESAWNYLKG-ILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLEN 271
Query: 1231 QAEVKKRCL 1239
Q + K+ L
Sbjct: 272 QCDNKEDIL 280
Score = 47.3 bits (111), Expect = 6e-06
Identities = 29/238 (12%), Positives = 79/238 (33%), Gaps = 3/238 (1%)
Query: 981 DNLERALQLLDEAIKVFPDFAKLWMMKGQI-EEQKNLLDKAHDTFSQAIKKCPHSVPLWI 1039
+ ERA +L +AI++ +W + + + + L + + + I++ P + +W
Sbjct: 57 ERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWH 116
Query: 1040 MLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQEC 1099
L E + + + ++ W V L D + + L+E
Sbjct: 117 HRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKED 176
Query: 1100 PNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQKCHRSGSRR 1159
+W + F+ ++ ++ ++ V N + +
Sbjct: 177 VRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLS 236
Query: 1160 CMGVKTKSVDALKKCEHDPHVLLAVSKLF--WCENKNQKCREWFNRTVKIDPDLGDAW 1215
+ L+ P+++ + ++ EN+ + N+ +++ L
Sbjct: 237 KYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEK 294
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 334
Score = 45.8 bits (107), Expect = 2e-05
Identities = 31/270 (11%), Positives = 69/270 (25%), Gaps = 36/270 (13%)
Query: 984 ERALQLLDEAIKVFPDFAKLWMMKGQI----------EEQKNLLDKAHDTFSQAIKKCPH 1033
E L+L + + PDFA LW + ++ EE L+ ++ P
Sbjct: 46 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK 105
Query: 1034 SVPLWIMLANLEER--RKMLIKARSVLEKGRLRNPNCAELWLAAI-RVEIRAGLKDIANT 1090
S W L R + + + + W A
Sbjct: 106 SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELA 165
Query: 1091 MMAKALQECPNAGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVSKLFWCENKNQ 1150
+ + W L P+ + S + E+ L + + + + N
Sbjct: 166 FTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPND 225
Query: 1151 KCHRSGSRRCMGVKTKSV-----------------------DALKKCEHDPHVLLAVSKL 1187
+ R +G + + + ++ + +
Sbjct: 226 QSAWFYHRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRA 285
Query: 1188 FWCENKNQKCREWFNRTVKIDPDLGDAWAY 1217
++ ++F+ +DP
Sbjct: 286 LDPLLYEKETLQYFSTLKAVDPMRAAYLDD 315
Score = 42.3 bits (98), Expect = 3e-04
Identities = 29/283 (10%), Positives = 59/283 (20%), Gaps = 10/283 (3%)
Query: 762 YECARAIYAQALATFPSKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLWLMGA 821
E + +Q L P ++W ++ T +S E A E +
Sbjct: 45 DESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNP 104
Query: 822 KSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPK-SEVLWLMGAKSKWLAGDVPAAR 880
KS L + + + + A
Sbjct: 105 KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEEL 164
Query: 881 GILSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAA 940
N ++ W L + + + E+ A
Sbjct: 165 AFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLP------ENVLLKELELVQNA 218
Query: 941 VKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFPDF 1000
+ + R A S + L + + + L E
Sbjct: 219 FFTDPNDQSAWFYHR---WLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPENKWC 275
Query: 1001 AKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLAN 1043
++ + + + FS P L +
Sbjct: 276 LLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRS 318
Score = 36.1 bits (82), Expect = 0.022
Identities = 17/168 (10%), Positives = 41/168 (24%), Gaps = 7/168 (4%)
Query: 495 NDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLE 554
+ S+ N ++ +W + L + +L
Sbjct: 158 VAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQN 217
Query: 555 AARLQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWK 614
A P D + + + + + + T +++ ++ E P +
Sbjct: 218 AFFTDPNDQSAWFYHRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPENKWCLL 277
Query: 615 AAV-------ELEDPEDARILLSRAVECCPTSVELWLALARLETYENA 655
+ L ++ S P L EN+
Sbjct: 278 TIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENS 325
Score = 31.5 bits (70), Expect = 0.66
Identities = 29/302 (9%), Positives = 74/302 (24%), Gaps = 28/302 (9%)
Query: 498 KKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEENQTSEDLWLEAAR 557
+ L + NP+ W + + ++ E E R
Sbjct: 46 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLE----SCLR 101
Query: 558 LQPVDTARAVIAQAVRHIPTSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAV 617
+ P H + + R + R + AA
Sbjct: 102 VNPKS------YGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ 155
Query: 618 ELEDPEDARILLSRAVECCPTSVELW----LALARLETYENARKVLNKARENIPTDRQIW 673
P + + ++ W L +L ++ + + ++
Sbjct: 156 AAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELV 215
Query: 674 TTAAKLEEAHGNNAMVDKIIDRALSSLSANGVEINREHWFKEAIEAEKAGSVHTCQALIR 733
A + + + + L + + + + +E+ C+ L
Sbjct: 216 QNAFFTDPNDQSAWFYHRWLLGRAEPLFRCELSVEKSTVLQSELES--------CKELQE 267
Query: 734 AIIGYGVEQEDRKHTWMEDAESCANQGAYECARAIYAQALATFPSKKSIW--LRAAYFEK 791
E + T + + + ++ A P + + LR+ + +
Sbjct: 268 LE----PENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLE 323
Query: 792 NH 793
N
Sbjct: 324 NS 325
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 45.3 bits (105), Expect = 3e-05
Identities = 41/337 (12%), Positives = 86/337 (25%), Gaps = 31/337 (9%)
Query: 753 AESCANQGAYECARAIYAQALATFPSKKSIWLRAAYFE---------KNHGTRESLETLL 803
A+ N G + A + AL P A + + ++
Sbjct: 19 AQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTE 78
Query: 804 QKAVAHCPKSEVLWLMGAKSNKKSIWLRAAYFEKNHGTRESLETLLQKAVAHCPKSEVLW 863
Q A H LW + +S + ++ + + ++ + P E L
Sbjct: 79 QMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQ--EKAFQLINEQHLEQLPMHEFLV 136
Query: 864 LMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLA------AVKLESENNEYERARRLL 917
+ A+ W + A + + + + + +L
Sbjct: 137 RIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLN 196
Query: 918 AKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAPTPRVMIQS---- 973
+ V + A L +Q
Sbjct: 197 RLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRN 256
Query: 974 -AKLEWCLDNLERALQLLDEAIKVF------PDFAKLWMMKGQIEEQKNLLDKAHDTFSQ 1026
A+ + L E A +L+E + D + ++ Q+ Q A
Sbjct: 257 IARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLD 316
Query: 1027 AIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRL 1063
A+K + + E M + R +++ L
Sbjct: 317 ALKLAN---RTGFISHFVIEGEAMAQQLRQLIQLNTL 350
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 43.0 bits (100), Expect = 8e-05
Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 7/198 (3%)
Query: 930 NPNSEEIWLAAVKLESENNEYERARRLLAKARASAPT-PRVMIQSAKLEWCLDNLERALQ 988
+P+++E+ +L +Y A +A P A + E+AL
Sbjct: 1 SPSAQELKEQGNRL-FVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALA 59
Query: 989 LLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERR 1048
A+++ K GQ + + D+A +A L ++
Sbjct: 60 DCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ-----RLNFGDDIP 114
Query: 1049 KMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAE 1108
L A+ E L + + A ++ + + + G + A+
Sbjct: 115 SALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQ 174
Query: 1109 AIFLEPRPQRKTKSVDAL 1126
+E + + +D L
Sbjct: 175 QACIEAKHDKYMADMDEL 192
Score = 35.3 bits (80), Expect = 0.029
Identities = 16/151 (10%), Positives = 46/151 (30%)
Query: 1001 AKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEK 1060
A+ +G +A + +AI + P + A + + +A + +
Sbjct: 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRR 63
Query: 1061 GRLRNPNCAELWLAAIRVEIRAGLKDIANTMMAKALQECPNAGILWAEAIFLEPRPQRKT 1120
+ + + ++ D A + +A + + + I R +K
Sbjct: 64 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKK 123
Query: 1121 KSVDALKKCEHDPHVLLAVSKLFWCENKNQK 1151
+ ++ H L + + ++
Sbjct: 124 RWNSIEERRIHQESELHSYLTRLIAAERERE 154
Score = 28.4 bits (62), Expect = 4.3
Identities = 6/86 (6%), Positives = 27/86 (31%)
Query: 1170 ALKKCEHDPHVLLAVSKLFWCENKNQKCREWFNRTVKIDPDLGDAWAYFYKFEIINGTEE 1229
A+ + + + + ++ R +++D A + + ++ + +
Sbjct: 30 AITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYD 89
Query: 1230 TQAEVKKRCLAAEPKHGENWCRVAKN 1255
+R + + N+ +
Sbjct: 90 EAIANLQRAYSLAKEQRLNFGDDIPS 115
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 122
Score = 37.4 bits (86), Expect = 0.002
Identities = 12/116 (10%), Positives = 33/116 (28%), Gaps = 12/116 (10%)
Query: 906 ENNEYERARRLLAKARAQAGAFQANPNSEEIWLA---AVKLESENNEYERARRLLAKARA 962
+ + + A S+ + N++ + LL +
Sbjct: 11 SVEDLLKFEKKFQSE------KAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLP 64
Query: 963 SAPTPR---VMIQSAKLEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKN 1015
+ A + L E+AL+ + ++ P + ++ I++
Sbjct: 65 KGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK 120
Score = 30.8 bits (69), Expect = 0.36
Identities = 9/110 (8%), Positives = 33/110 (30%), Gaps = 6/110 (5%)
Query: 946 ENNEYERARRLLAKARASAP---TPRVMIQSAKLEWC-LDNLERALQLLDEAIKVF--PD 999
+ + + +A+ + + + D++ + + LL+E + +
Sbjct: 11 SVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEE 70
Query: 1000 FAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRK 1049
+ +KA ++ P + + +++ K
Sbjct: 71 QRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK 120
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 32.7 bits (73), Expect = 0.082
Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 946 ENNEYERARRLLAKARASAPTPRVMI-QSAKLEWCLDNLERALQLLDEAIKVFPDFAKLW 1004
+ A + ++A P V+ + + ++A + + + + PD+ K +
Sbjct: 15 SVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGY 74
Query: 1005 MMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEER 1047
K E N ++A T+ + +K ++ L L N+E R
Sbjct: 75 SRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEAR 117
>d1r0da_ a.216.1.1 (A:) Huntingtin interacting protein 12 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 194
Score = 30.6 bits (69), Expect = 0.79
Identities = 12/88 (13%), Positives = 31/88 (35%), Gaps = 9/88 (10%)
Query: 897 WLAAVKLESENNEYERARRLLAKARAQAGAFQ-----ANPNSEEIWLAAVKLESENNEYE 951
+ + S + E R+L A + + +EI + ++ Y
Sbjct: 32 MMNQARHASSGVKLEVNERILNSCTDLMKAIRLLVTTSTSLQKEIVESGRGAATQQEFYA 91
Query: 952 RARR----LLAKARASAPTPRVMIQSAK 975
+ R L++ ++A ++++A
Sbjct: 92 KNSRWTEGLISASKAVGWGATQLVEAAD 119
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 30.6 bits (68), Expect = 0.95
Identities = 15/138 (10%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 982 NLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIML 1041
+ + AL +++ G + + +A F+++I + H +
Sbjct: 20 DWKGALDAFSAVQ---DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQR 76
Query: 1042 ANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIANTMMA--KALQEC 1099
L + + A L++ ++ + + ++ + ++ + +E
Sbjct: 77 GMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEW 136
Query: 1100 PNAGILWAEAIFLEPRPQ 1117
A A A ++ P+
Sbjct: 137 KKAEEQLALATSMKSEPR 154
Score = 29.0 bits (64), Expect = 3.1
Identities = 20/179 (11%), Positives = 47/179 (26%), Gaps = 27/179 (15%)
Query: 906 ENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARASAP 965
+ +++ A + I + + A + ++
Sbjct: 17 DKKDWKGALDAFSAV---------QDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDK 67
Query: 966 TPRVMIQSAKLEW-CLDNLERALQLLDEAIKVFP----------------DFAKLWMMKG 1008
V + + + + A++ L EA+ ++
Sbjct: 68 HLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIA 127
Query: 1009 QIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKMLIKARSVLEKGRLRNPN 1067
+ +K KA + + A I A ++ L + + GRL PN
Sbjct: 128 FMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVI-PVGRLFRPN 185
>d1qkla_ a.143.1.2 (A:) RPB6 {Human (Homo sapiens) [TaxId: 9606]}
Length = 127
Score = 29.0 bits (65), Expect = 1.4
Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 13/75 (17%)
Query: 115 DEEEDDEEDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYREKR 174
+E+ D +D +D DE D + +EE E + E+ + +++
Sbjct: 4 NEDNFDGDDFDDVEEDE---------GLDDLENAEEEGQENVEILPSG--ERPQANQKRI 52
Query: 175 LREELERYRQERPKI 189
+ +Y ER ++
Sbjct: 53 TTPYMTKY--ERARV 65
Score = 29.0 bits (65), Expect = 1.4
Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 13/75 (17%)
Query: 284 DEEEDDEEDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRKDYREKR 343
+E+ D +D +D DE D + +EE E + E+ + +++
Sbjct: 4 NEDNFDGDDFDDVEEDE---------GLDDLENAEEEGQENVEILPSG--ERPQANQKRI 52
Query: 344 LREELERYRQERPKI 358
+ +Y ER ++
Sbjct: 53 TTPYMTKY--ERARV 65
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 124
Score = 29.0 bits (65), Expect = 1.7
Identities = 11/82 (13%), Positives = 28/82 (34%), Gaps = 11/82 (13%)
Query: 601 KALEHIPNSVRLWKAAVELEDPEDARILLSRAVECCPTSVELWLALARLETYENARKVLN 660
+ V++ + E R L L + +L Y A++ ++
Sbjct: 49 TDVNDERLGVKILTDIYK-EAESRRRECL----------YYLTIGCYKLGEYSMAKRYVD 97
Query: 661 KARENIPTDRQIWTTAAKLEEA 682
E+ ++Q+ + +E+
Sbjct: 98 TLFEHERNNKQVGALKSMVEDK 119
Score = 27.0 bits (60), Expect = 6.6
Identities = 5/36 (13%), Positives = 15/36 (41%)
Query: 980 LDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKN 1015
L A + +D + + ++ +K +E++
Sbjct: 86 LGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQ 121
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 29.2 bits (64), Expect = 3.4
Identities = 16/130 (12%), Positives = 45/130 (34%), Gaps = 8/130 (6%)
Query: 976 LEWCLDNLERALQLLDEAIKVFPDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSV 1035
+D E A + + K ++ ++ +A D +S+ IK +
Sbjct: 134 YAKAIDCYELAGEW-YAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192
Query: 1036 PL-------WIMLANLEERRKMLIKARSVLEKGRLRNPNCAELWLAAIRVEIRAGLKDIA 1088
++ + + A L++G+ +PN A+ + + + +
Sbjct: 193 LSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGD 252
Query: 1089 NTMMAKALQE 1098
+ +++ +E
Sbjct: 253 SEQLSEHCKE 262
>d1emsa1 d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-terminal
domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Length = 160
Score = 28.3 bits (62), Expect = 3.5
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 144 PYDKDDEEADMIYEEI-DKRMDEKRKDYREKRLREELERYRQE 185
P D + IY+++ + +RK +++ EE YR
Sbjct: 117 PRRAGDFGDNEIYQKLASHDKEPERKPRSNEQMAEEAVVYRNL 159
Score = 28.3 bits (62), Expect = 3.5
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 313 PYDKDDEEADMIYEEI-DKRMDEKRKDYREKRLREELERYRQE 354
P D + IY+++ + +RK +++ EE YR
Sbjct: 117 PRRAGDFGDNEIYQKLASHDKEPERKPRSNEQMAEEAVVYRNL 159
>d2e1da1 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 319
Score = 28.5 bits (63), Expect = 4.6
Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 940 AVKLESENNEYERARRLLAKARASAPTPRVMIQSAKLEWCLDNLERALQLLDEAIKVFP- 998
+ E + + A L KA ++ + ++ + W + + A++ L + I+ F
Sbjct: 246 KLLGELLKDNSKLAPALSVKAAQTSDSEKIHLDEKAFRWLHNEDQMAVEKLSDGIRKFAA 305
Query: 999 DFAKL 1003
D KL
Sbjct: 306 DAIKL 310
>d1r9da_ c.7.1.1 (A:) Glycerol dehydratase DhaB1 {Clostridium
butyricum [TaxId: 1492]}
Length = 786
Score = 29.0 bits (65), Expect = 4.7
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 109 VKRKKKDEEEDDEEDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRK 168
V + K + ++ L +++F L N + D +E D + E +
Sbjct: 566 VFDENKITPSELKKTL-NNDFKNSEEIQALLKNAPKFGNDIDEVDNLAREGALVYCREVN 624
Query: 169 DYREKR 174
Y R
Sbjct: 625 KYTNPR 630
Score = 29.0 bits (65), Expect = 4.7
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 278 VKRKKKDEEEDDEEDLNDSNFDEFNGYGGSLFNKDPYDKDDEEADMIYEEIDKRMDEKRK 337
V + K + ++ L +++F L N + D +E D + E +
Sbjct: 566 VFDENKITPSELKKTL-NNDFKNSEEIQALLKNAPKFGNDIDEVDNLAREGALVYCREVN 624
Query: 338 DYREKR 343
Y R
Sbjct: 625 KYTNPR 630
>d2hkua1 a.4.1.9 (A:18-87) Putative transcriptional regulator
RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Length = 70
Score = 26.1 bits (57), Expect = 5.3
Identities = 15/67 (22%), Positives = 25/67 (37%)
Query: 894 EEIWLAAVKLESENNEYERARRLLAKARAQAGAFQANPNSEEIWLAAVKLESENNEYERA 953
+ ++ AA +L E+ E ++ A A A S+E V + +RA
Sbjct: 4 DALFTAATELFLEHGEGVPITQICAAAGAHPNQVTYYYGSKERLFVEVACAAVLRAGKRA 63
Query: 954 RRLLAKA 960
A A
Sbjct: 64 EDDAATA 70
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 28.7 bits (63), Expect = 5.7
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 150 EEADMIYEEIDKRMDEKRKDYREKRLREELERYRQERPKIQQQFSDLKRGLVTVSMDEW 208
++ + I + E + + + +EL R RP + G++ + W
Sbjct: 284 TSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGILG-VYGGMIYTGIFYW 341
Score = 28.7 bits (63), Expect = 5.7
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 319 EEADMIYEEIDKRMDEKRKDYREKRLREELERYRQERPKIQQQFSDLKRGLVTVSMDEW 377
++ + I + E + + + +EL R RP + G++ + W
Sbjct: 284 TSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGILG-VYGGMIYTGIFYW 341
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923
{Corynebacterium glutamicum [TaxId: 1718]}
Length = 269
Score = 27.7 bits (61), Expect = 9.2
Identities = 9/45 (20%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 144 PYDKDDEEADMIYEEIDKRM--DEKRKDY---REKRLREELERYR 183
P + +A+ ++ ++ ++ + + E++ ELERYR
Sbjct: 225 PLLALERDAEKVHRQLMEQTEESSEIQRVVGALEQQYDSELERYR 269
Score = 27.7 bits (61), Expect = 9.2
Identities = 9/45 (20%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 313 PYDKDDEEADMIYEEIDKRM--DEKRKDY---REKRLREELERYR 352
P + +A+ ++ ++ ++ + + E++ ELERYR
Sbjct: 225 PLLALERDAEKVHRQLMEQTEESSEIQRVVGALEQQYDSELERYR 269
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 26.8 bits (58), Expect = 9.8
Identities = 16/114 (14%), Positives = 43/114 (37%), Gaps = 12/114 (10%)
Query: 946 ENNEYERARRLLAKARASAP--------TPRVMIQSAKLEWCLDNLERALQLLDEAIKVF 997
+ +++ A + KA+ P V + C + E+A+++ E + +
Sbjct: 16 KKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75
Query: 998 PDFAKLWMMKGQIEEQKNLLDKAHDTFSQAIKKCPHSVPLWIMLANLEERRKML 1051
AK + G ++ A +++++ + +L ++ K+L
Sbjct: 76 RQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPD----VLKKCQQAEKIL 125
>d1r76a_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase)
{Azospirillum irakense [TaxId: 34011]}
Length = 408
Score = 27.6 bits (61), Expect = 9.8
Identities = 17/160 (10%), Positives = 35/160 (21%), Gaps = 25/160 (15%)
Query: 824 NKKSIWLRAAYFEKNHGTRESLETLLQKAVAH---------CPKSEVLWLMGAKSKWLAG 874
+++ W Y ++ + L +A K + + W
Sbjct: 23 TQRAAWQ--EYLARSEAQLSRDKASLAAELAPGQPLPPPPAEGKGADTMPLDKPAAWYTS 80
Query: 875 DVPAARGILSLAFQ-------------ANPNSEEIWLAAVKLESENNEYERARRLLAKAR 921
+ ++FQ + + +
Sbjct: 81 KAARHVADVIVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDW 140
Query: 922 AQAGAFQANPNSEEI-WLAAVKLESENNEYERARRLLAKA 960
G + EI +LA V + E R K
Sbjct: 141 HYVGTIDNDATVTEIRFLAQVVSQLAPEEAAPYRDAALKG 180
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.132 0.392
Gapped
Lambda K H
0.267 0.0663 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,915,350
Number of extensions: 246057
Number of successful extensions: 1062
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1003
Number of HSP's successfully gapped: 121
Length of query: 1278
Length of database: 2,407,596
Length adjustment: 96
Effective length of query: 1182
Effective length of database: 1,089,516
Effective search space: 1287807912
Effective search space used: 1287807912
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.3 bits)