RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy3226
         (111 letters)



>d1wspa1 d.15.1.8 (A:750-832) Axin 1 {Rat (Rattus norvegicus)
           [TaxId: 10116]}
          Length = 83

 Score =  115 bits (289), Expect = 7e-36
 Identities = 34/81 (41%), Positives = 55/81 (67%)

Query: 24  FTTVVFTFCDEQYPYRTKIPSQSVTLKQFKDYLPKKGNYRFFFKTECDDVDTKVIQEEIV 83
              V + FC E  PYRT +  ++VTL QFK+ L KKG+YR++FK   D+ D  V+ EE+ 
Sbjct: 3   SIVVAYYFCGEPIPYRTLVRGRAVTLGQFKELLTKKGSYRYYFKKVSDEFDCGVVFEEVR 62

Query: 84  DDNEVLPLWEGKVMGQVKPLE 104
           +D  +LP++E K++G+V+ ++
Sbjct: 63  EDEAILPVFEEKIIGKVEKVD 83


>d2fsua1 c.67.2.1 (A:12-194) Phosphonate metabolism protein PhnH
          {Escherichia coli [TaxId: 562]}
          Length = 183

 Score = 24.0 bits (52), Expect = 5.1
 Identities = 7/33 (21%), Positives = 14/33 (42%)

Query: 1  MSNSCTLRSVTSTPRPPEHQSGTFTTVVFTFCD 33
          MS    + ++    R  +  +   T+V+ T  D
Sbjct: 14 MSEPGVIVALHQLKRGWQPLNIATTSVLLTLAD 46


>d1bvp11 a.115.1.1 (1:1-120,1:255-349) BTV vp7 {Bluetongue virus
          [TaxId: 40051]}
          Length = 215

 Score = 24.1 bits (52), Expect = 5.1
 Identities = 8/24 (33%), Positives = 9/24 (37%), Gaps = 1/24 (4%)

Query: 3  NSCTLRSVTSTPR-PPEHQSGTFT 25
          N  TLR VT  P    +     F 
Sbjct: 41 NGLTLRGVTMRPTSLAQRNEMFFM 64


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.134    0.409 

Gapped
Lambda     K      H
   0.267   0.0556    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 429,511
Number of extensions: 18630
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 30
Number of HSP's successfully gapped: 5
Length of query: 111
Length of database: 2,407,596
Length adjustment: 70
Effective length of query: 41
Effective length of database: 1,446,496
Effective search space: 59306336
Effective search space used: 59306336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.3 bits)