Query psy3228
Match_columns 410
No_of_seqs 136 out of 721
Neff 3.3
Searched_HMMs 29240
Date Fri Aug 16 19:39:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3228.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3228hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dk8_A Axin; alpha-helix, PI-h 99.9 2E-27 6.9E-32 201.8 12.0 109 44-157 7-123 (147)
2 2dlr_A RGS10, regulator of G-p 99.9 1.8E-27 6E-32 203.9 11.1 111 39-157 5-118 (149)
3 2dlv_A RGS18, regulator of G-p 99.9 5.4E-27 1.8E-31 197.8 11.8 113 38-157 4-119 (140)
4 1cmz_A Protein (GAIP (G-alpha 99.9 7.8E-27 2.7E-31 200.1 9.3 116 35-157 6-124 (152)
5 3c7l_A Regulator of G-protein 99.9 5.6E-26 1.9E-30 192.5 13.3 111 40-157 9-122 (137)
6 2oj4_A RGS3, regulator of G-pr 99.9 5E-26 1.7E-30 188.2 11.1 107 44-157 2-111 (127)
7 1zv4_X RGS17, regulator of G-p 99.9 7.8E-26 2.7E-30 197.2 12.2 110 41-157 25-137 (158)
8 2crp_A RGS5, regulator of G-pr 99.9 1.1E-25 3.7E-30 193.0 12.8 111 40-157 16-129 (150)
9 2jm5_A RGS18, regulator of G-p 99.9 1.2E-25 4.1E-30 193.3 11.6 111 40-157 2-115 (151)
10 2af0_A Regulator of G-protein 99.9 1.7E-25 5.8E-30 190.6 11.9 111 40-157 14-127 (146)
11 2ihd_A RGS8, regulator of G-pr 99.9 1.7E-25 6E-30 194.0 11.7 112 39-157 25-139 (155)
12 2a72_A Regulator of G-protein 99.9 5.1E-25 1.7E-29 188.1 12.3 111 39-157 3-116 (146)
13 2bv1_A Regulator of G-protein 99.9 3.7E-25 1.3E-29 188.7 9.6 110 40-157 13-125 (145)
14 1fqi_A RGS9, regulator of G-pr 99.9 6.2E-25 2.1E-29 188.1 10.9 110 40-157 12-124 (147)
15 2ebz_A RGS12, regulator of G-p 99.9 9.7E-25 3.3E-29 188.3 11.6 110 40-157 6-120 (155)
16 2jnu_A RGS14, regulator of G-p 99.9 1.7E-25 5.8E-30 192.9 6.8 108 42-157 4-116 (154)
17 2ihb_B Regulator of G-protein 99.9 7.7E-25 2.6E-29 188.6 10.0 111 39-157 21-134 (153)
18 1agr_E RGS4; GI-alpha-1, hydro 99.9 3.5E-24 1.2E-28 195.9 10.4 111 40-157 50-163 (205)
19 2pbi_A Regulator of G-protein 99.9 1.1E-22 3.6E-27 204.7 8.3 128 11-157 271-401 (424)
20 3cx8_B RHO guanine nucleotide 98.2 9.4E-06 3.2E-10 75.7 11.4 102 50-157 23-127 (203)
21 3v5w_A G-protein coupled recep 97.6 0.00012 4E-09 78.1 9.3 101 52-157 54-160 (689)
22 1iap_A Guanine nucleotide exch 97.5 0.00014 4.9E-09 68.2 7.0 95 52-149 7-104 (211)
23 3ab3_B RHO guanine nucleotide 97.5 4.5E-05 1.6E-09 72.8 3.6 101 52-155 61-164 (246)
24 4gou_A EHRGS-rhogef; RGS domai 97.5 0.00055 1.9E-08 67.7 10.4 102 52-157 15-123 (518)
25 3utm_C Axin-1; tankyrase, TNKS 97.0 0.00022 7.4E-09 58.6 2.1 25 5-30 58-82 (83)
26 2acx_A G protein-coupled recep 96.9 0.003 1E-07 65.4 9.6 97 52-155 52-154 (576)
27 3c4z_A Rhodopsin kinase; Ser/T 79.3 3.9 0.00013 41.8 7.3 55 57-112 63-118 (543)
28 2pih_A Protein YMCA; regulate 44.9 1.2E+02 0.0042 26.1 9.1 62 43-110 23-84 (151)
No 1
>1dk8_A Axin; alpha-helix, PI-helix, signaling protein; HET: SO4; 1.57A {Homo sapiens} SCOP: a.91.1.1 PDB: 1emu_A
Probab=99.95 E-value=2e-27 Score=201.84 Aligned_cols=109 Identities=33% Similarity=0.678 Sum_probs=101.1
Q ss_pred hhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcC----CCHHHHHHHHHHHHHhhh-cCC---CCC
Q psy3228 44 PNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQ----TNQDQINLIVKCIYRRYF-KDS---RLG 115 (410)
Q Consensus 44 P~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~----~D~ek~lKlAK~IYdKYI-sss---EVN 115 (410)
+++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++|++||+. .+.+++.+.|+.||++|| .++ +||
T Consensus 7 ~~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~~~enl~Fw~~ve~~k~~~~~~~~~~~~~~~a~~Iy~~yi~~~~s~~~vn 86 (147)
T 1dk8_A 7 PPYLKWAESLHSLLDDQDGISLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNEEKRLKLARAIYRKYILDNNGIVSRQ 86 (147)
T ss_dssp CHHHHHHHCHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHCCCCTTSHHHHHHHHHHHHHHHTSCTTSHHHHH
T ss_pred hhHHHHHhCHHHHHCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHhCCccCCCCCC
Confidence 789999999999999999999999999999999999999999999998 456789999999999999 765 799
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 116 LSEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 116 IPeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
|+..+|..|.+.+... .+++++||+||.+|+.+|+.|
T Consensus 87 i~~~~r~~i~~~l~~~-----~~~~~~Fd~aq~~V~~~m~~d 123 (147)
T 1dk8_A 87 TKPATKSFIKGCIMKQ-----LIDPAMFDQAQTEIQATMEEN 123 (147)
T ss_dssp SCHHHHHHHHHHHHHT-----CCCTTTTHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHhhc
Confidence 9999999998888753 578899999999999999988
No 2
>2dlr_A RGS10, regulator of G-protein signaling 10; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=1.8e-27 Score=203.88 Aligned_cols=111 Identities=27% Similarity=0.460 Sum_probs=101.4
Q ss_pred CCCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCC
Q psy3228 39 LSTSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLG 115 (410)
Q Consensus 39 es~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVN 115 (410)
..++++++.+|+.+|+.||.||.|+.+|++||++++|.|||.||++|++||+..+.+++.+.|+.||++||.++ +||
T Consensus 5 ~~~~~~~~~~w~~sl~~iL~~~~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evN 84 (149)
T 2dlr_A 5 SSGSLKSTAKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVN 84 (149)
T ss_dssp CCCSSCCHHHHHHCHHHHHHSHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTTSSTTCSSCCC
T ss_pred CCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCCCcccc
Confidence 45677899999999999999999999999999999999999999999999999888899999999999999885 899
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 116 LSEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 116 IPeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
|+..+|. +.+.+. .+++++||+||.+|+.+|+.|
T Consensus 85 i~~~~r~-~~~~~~-------~p~~~~Fd~aq~~V~~~m~~d 118 (149)
T 2dlr_A 85 VEGQSRL-NEKILE-------EPHPLMFQKLQDQIFNLMKYD 118 (149)
T ss_dssp CSCGGGC-CHHHHH-------SCCTTHHHHHHHHHHHHHHHT
T ss_pred CCHHHHH-HHHHHc-------CCCHHHHHHHHHHHHHHHHHC
Confidence 9999987 654432 468899999999999999987
No 3
>2dlv_A RGS18, regulator of G-protein signaling 18; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=5.4e-27 Score=197.81 Aligned_cols=113 Identities=28% Similarity=0.559 Sum_probs=103.6
Q ss_pred CCCCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CC
Q psy3228 38 ALSTSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RL 114 (410)
Q Consensus 38 ~es~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EV 114 (410)
...++++++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++|++||+..+.+++.+.|+.||++||.++ +|
T Consensus 4 ~~~~~~~~~~~w~~sl~~iL~~~~~~~~F~~Fl~~e~s~enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~ev 83 (140)
T 2dlv_A 4 GSSGSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEV 83 (140)
T ss_dssp CCCCCHHHHHHHTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSTTCC
T ss_pred CCCCCHHHHHHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCcccc
Confidence 346788999999999999999999999999999999999999999999999999767789999999999999885 89
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 115 GLSEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 115 NIPeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
|||..+|+.|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 84 ni~~~~r~~i~~~l~-------~p~~~~F~~aq~~V~~~m~~d 119 (140)
T 2dlv_A 84 NLDFHTKEVITNSIT-------QPTLHSFDAAQSRVYQLMEQD 119 (140)
T ss_dssp CCCHHHHHHHHHGGG-------SCCTTTTHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHhhC
Confidence 999999988766553 468899999999999999988
No 4
>1cmz_A Protein (GAIP (G-alpha interacting) protein); RGS, regulator of G protein, signaling protein regulation; NMR {Homo sapiens} SCOP: a.91.1.1
Probab=99.94 E-value=7.8e-27 Score=200.05 Aligned_cols=116 Identities=28% Similarity=0.561 Sum_probs=101.6
Q ss_pred CCCCCCCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC--
Q psy3228 35 GGEALSTSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS-- 112 (410)
Q Consensus 35 gG~~es~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss-- 112 (410)
||.-..+++.++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++|++||+..+.+++.+.|+.||++||.++
T Consensus 6 ~~~~~~p~~~~~~~~~~sl~~iL~~p~~~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~ 85 (152)
T 1cmz_A 6 GGGGGIPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSP 85 (152)
T ss_dssp ------CCHHHHHHHTTCSHHHHSSHHHHHHHHHHHHHHTCCHHHHHHHHHHHGGGTCCSHHHHHHHHHHHHHTTTCSSS
T ss_pred CCCCCCCCHHHHHHHHhhHHHHHCChHHHHHHHHHHHHhcChhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCC
Confidence 455557777889999999999999999999999999999999999999999999998777789999999999999885
Q ss_pred -CCCCCHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 113 -RLGLSEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 113 -EVNIPeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
+|||+..+|+.|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 86 ~evni~~~~r~~i~~~l~-------~p~~~~Fd~aq~~V~~~m~~d 124 (152)
T 1cmz_A 86 KEVSLDSRVREGINKKMQ-------EPSAHTFDDAQLQIYTLMHRD 124 (152)
T ss_dssp CCCSCCSHHHHHHHHHSS-------SCCTTSTHHHHHHHHHHHHHH
T ss_pred ceeeCCHHHHHHHHHHhc-------CCchHHHHHHHHHHHHHHHHC
Confidence 89999999988776542 468899999999999999887
No 5
>3c7l_A Regulator of G-protein signaling 16; RGS, RGS16, GAP, GTPase activating protein, heterotrimeric G-protein, lipoprotein, palmitate, phosphoprotein; 1.89A {Mus musculus} PDB: 3c7k_B* 2ik8_B*
Probab=99.93 E-value=5.6e-26 Score=192.55 Aligned_cols=111 Identities=23% Similarity=0.468 Sum_probs=100.1
Q ss_pred CCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCC
Q psy3228 40 STSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGL 116 (410)
Q Consensus 40 s~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNI 116 (410)
++.++++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++|++||+..+.+++.+.|+.||++||.++ +|||
T Consensus 9 ~~~~~~~~~w~~sl~~iL~~p~g~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi 88 (137)
T 3c7l_A 9 GSFSEDVLGWRESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHHIFDEYIRSEAPKEVNI 88 (137)
T ss_dssp -----CHHHHHHCHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCC
T ss_pred CCChHHHHHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCCccCCC
Confidence 4556889999999999999999999999999999999999999999999999887899999999999999886 8999
Q ss_pred CHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 117 SEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 117 PeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
|..+|..|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 89 ~~~~r~~i~~~l~-------~~~~~~Fd~aq~~V~~~m~~d 122 (137)
T 3c7l_A 89 DHETRELTKTNLQ-------AATTSCFDVAQGKTRTLMEKD 122 (137)
T ss_dssp CHHHHHHHHHHHH-------TTCTTTTHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHH-------cCCHHHHHHHHHHHHHHHHHC
Confidence 9999998887775 367899999999999999887
No 6
>2oj4_A RGS3, regulator of G-protein signaling 3, RGP3; RGS domain, signaling protein inhibitor; 2.30A {Homo sapiens}
Probab=99.93 E-value=5e-26 Score=188.23 Aligned_cols=107 Identities=24% Similarity=0.464 Sum_probs=98.7
Q ss_pred hhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCCCHHH
Q psy3228 44 PNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGLSEEC 120 (410)
Q Consensus 44 P~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNIPeqV 120 (410)
.++.+|+.+|+.||.||.|+.+|++||++++|.|||.||++|++||+..+.+++.+.|+.||++||.++ +||||..+
T Consensus 2 ~~~~~w~~sl~~iL~~~~g~~~F~~Fl~~e~~~enl~Fw~~ve~~k~~~~~~~~~~~a~~I~~~yi~~~s~~evni~~~~ 81 (127)
T 2oj4_A 2 EEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYT 81 (127)
T ss_dssp THHHHHTTCHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCHHH
T ss_pred HHHHHHHhHHHHHHCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHccCCCCcCccCCHHH
Confidence 578999999999999999999999999999999999999999999998788899999999999999985 89999999
Q ss_pred HHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 121 LSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 121 RkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
|..|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 82 r~~i~~~l~-------~~~~~~F~~aq~~v~~~m~~d 111 (127)
T 2oj4_A 82 REHTKDNLQ-------SVTRGCFDLAQKRIFGLMEKD 111 (127)
T ss_dssp HHHHHHTTS-------SCCTTTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHhc-------CCCHHHHHHHHHHHHHHHhhC
Confidence 887765542 478899999999999999887
No 7
>1zv4_X RGS17, regulator of G-protein signaling 17; human RGSZ2, human RGS17(Z2), regulator of G-protein signali opioid receptor interacting protein; 2.40A {Homo sapiens}
Probab=99.93 E-value=7.8e-26 Score=197.15 Aligned_cols=110 Identities=25% Similarity=0.576 Sum_probs=101.0
Q ss_pred CChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCCC
Q psy3228 41 TSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGLS 117 (410)
Q Consensus 41 ~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNIP 117 (410)
++++++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++|++||+..+.+++.+.|+.||++||.++ +|||+
T Consensus 25 ~~~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~ 104 (158)
T 1zv4_X 25 PTAEEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDYISILSPKEVSLD 104 (158)
T ss_dssp CCHHHHHHHTTCHHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTCCC-CCCCCCC
T ss_pred CCHHHHHHHHhhHHHHhCCHHHHHHHHHHHHHccCHhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHCCCCCCceeecC
Confidence 456789999999999999999999999999999999999999999999999888889999999999999885 89999
Q ss_pred HHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 118 EECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 118 eqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
..+|..|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 105 ~~~r~~i~~~l~-------~p~~~~Fd~aq~~V~~lm~~d 137 (158)
T 1zv4_X 105 SRVREVINRNLL-------DPNPHMYEDAQLQIYTLMHRD 137 (158)
T ss_dssp HHHHHHHHHTTS-------SCCTTTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh-------CCCHHHHHHHHHHHHHHHHHC
Confidence 999888765542 468899999999999999887
No 8
>2crp_A RGS5, regulator of G-protein signaling 5; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.93 E-value=1.1e-25 Score=193.00 Aligned_cols=111 Identities=25% Similarity=0.452 Sum_probs=102.2
Q ss_pred CCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCC
Q psy3228 40 STSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGL 116 (410)
Q Consensus 40 s~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNI 116 (410)
.++++++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++|++||+..+.+++.+.|+.||++||.++ +|||
T Consensus 16 ~~s~~~~~~w~~sl~~iL~~~~g~~~F~~Fl~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi 95 (150)
T 2crp_A 16 KTSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAPKEVNI 95 (150)
T ss_dssp CCCHHHHTHHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCCTTHHHHHHHHHHHHTSSTTCSSCCSC
T ss_pred CCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHccCCCCccCCC
Confidence 5677899999999999999999999999999999999999999999999999776789999999999999886 8999
Q ss_pred CHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 117 SEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 117 PeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
+..+|..|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 96 ~~~~r~~i~~~l~-------~p~~~~Fd~aq~~V~~~m~~d 129 (150)
T 2crp_A 96 DHFTKDITMKNLV-------EPSLSSFDMAQKRIHALMEKD 129 (150)
T ss_dssp CHHHHHHHHHTTS-------SCSSGGGHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHh-------CCCHHHHHHHHHHHHHHHHHH
Confidence 9999988765542 568999999999999999888
No 9
>2jm5_A RGS18, regulator of G-protein signaling 18; signaling protein, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} SCOP: a.91.1.1 PDB: 2owi_A
Probab=99.93 E-value=1.2e-25 Score=193.26 Aligned_cols=111 Identities=28% Similarity=0.567 Sum_probs=102.7
Q ss_pred CCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCC
Q psy3228 40 STSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGL 116 (410)
Q Consensus 40 s~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNI 116 (410)
.++++++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++|++||+..+.+++.+.|+.||++||.++ +|||
T Consensus 2 ~~~~~~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi 81 (151)
T 2jm5_A 2 MVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNL 81 (151)
T ss_dssp CCCHHHHHHHTTCHHHHHHSHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTTCSSSSSCCCC
T ss_pred CCCHHHHHHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHccCcchhhcCC
Confidence 4567899999999999999999999999999999999999999999999999888899999999999999986 8999
Q ss_pred CHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 117 SEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 117 PeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
|..+|..|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 82 ~~~~r~~i~~~l~-------~p~~~~Fd~aq~~V~~~m~~d 115 (151)
T 2jm5_A 82 DFHTKEVITNSIT-------QPTLHSFDAAQSRVYQLMEQD 115 (151)
T ss_dssp CHHHHHHHHHHTT-------SCCTTTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh-------CCCHHHHHHHHHHHHHHHhhC
Confidence 9999988776553 468999999999999999888
No 10
>2af0_A Regulator of G-protein signaling 2; helix, structural genomics, structural genomics consortium, SGC, signaling protein; 2.30A {Homo sapiens} PDB: 2v4z_B*
Probab=99.93 E-value=1.7e-25 Score=190.60 Aligned_cols=111 Identities=25% Similarity=0.508 Sum_probs=102.7
Q ss_pred CCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCC
Q psy3228 40 STSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGL 116 (410)
Q Consensus 40 s~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNI 116 (410)
.+++.++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++|++||+..+.+++.+.|+.||++||.++ +|||
T Consensus 14 ~~s~~~~~~w~~sl~~iL~~p~g~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi 93 (146)
T 2af0_A 14 KPSPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINI 93 (146)
T ss_dssp SCCHHHHHHTTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSTTCTTCCCC
T ss_pred CCCHHHHHHHHhHHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCcCCCCcccCc
Confidence 4567899999999999999999999999999999999999999999999999878899999999999999985 8999
Q ss_pred CHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 117 SEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 117 PeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
+..+|+.|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 94 ~~~~r~~i~~~l~-------~~~~~~Fd~aq~~V~~~m~~d 127 (146)
T 2af0_A 94 DFQTKTLIAQNIQ-------EATSGCFTTAQKRVYSLMENN 127 (146)
T ss_dssp CHHHHHHHHHHGG-------GCCTTTTHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHhhC
Confidence 9999988876663 368899999999999999887
No 11
>2ihd_A RGS8, regulator of G-protein signaling 8; signaling protein, structural genomics, structura genomics consortium, SGC, signaling protein; 1.70A {Homo sapiens} PDB: 2ode_B* 2bt2_A
Probab=99.92 E-value=1.7e-25 Score=194.05 Aligned_cols=112 Identities=23% Similarity=0.424 Sum_probs=101.8
Q ss_pred CCCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCC
Q psy3228 39 LSTSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLG 115 (410)
Q Consensus 39 es~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVN 115 (410)
+.++++++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++|++||+..+.+++.+.|+.||++||.++ +||
T Consensus 25 ~~~s~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evN 104 (155)
T 2ihd_A 25 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVN 104 (155)
T ss_dssp ---CHHHHHHTTSCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCC
T ss_pred CCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCcCCCccccC
Confidence 36778899999999999999999999999999999999999999999999999878899999999999999886 899
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 116 LSEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 116 IPeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
||..+|..|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 105 I~~~~r~~i~~~l~-------~p~~~~Fd~aq~~V~~~m~~d 139 (155)
T 2ihd_A 105 IDFQTREATRKNLQ-------EPSLTCFDQAQGKVHSLMEKD 139 (155)
T ss_dssp CCHHHHHHHHHHTT-------SCCTTTTHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHhhC
Confidence 99999988776652 468999999999999999887
No 12
>2a72_A Regulator of G-protein signalling 7; human RGS7, regulator of G-protein signaling 7, GTPase-activ proteins (GAP), structural genomics; 2.00A {Homo sapiens} PDB: 2d9j_A 2es0_A
Probab=99.92 E-value=5.1e-25 Score=188.06 Aligned_cols=111 Identities=23% Similarity=0.434 Sum_probs=101.2
Q ss_pred CCCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCC
Q psy3228 39 LSTSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLG 115 (410)
Q Consensus 39 es~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVN 115 (410)
..+++.++.+|+.+|+.||.||.|+.+|++||++++|.|||.||++|++||+.. .+++.+.|+.||++||.++ +||
T Consensus 3 ~~~~~~~~~~w~~sl~~iL~~p~g~~~F~~Fl~~e~~~Enl~Fw~~ve~~k~~~-~~~~~~~a~~Iy~~yi~~~s~~evN 81 (146)
T 2a72_A 3 KEPSQQRVKRWGFGMDEALKDPVGREQFLKFLESEFSSENLRFWLAVEDLKKRP-IKEVPSRVQEIWQEFLAPGAPSAIN 81 (146)
T ss_dssp CCCCHHHHHHGGGCHHHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTSC-GGGHHHHHHHHHHHHTSTTCTTCCC
T ss_pred CCCCHHHHHHHHhHHHHHhCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHcCCCCcccCC
Confidence 356778999999999999999999999999999999999999999999999984 4578899999999999885 899
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 116 LSEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 116 IPeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
||..+|..|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 82 i~~~~r~~i~~~l~-------~p~~~~Fd~aq~~V~~~m~~d 116 (146)
T 2a72_A 82 LDSKSYDKTTHNVK-------EPGRYTFEDAQEHIYKLMKSD 116 (146)
T ss_dssp CCHHHHHHHHHHHH-------STTTTTTHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHhC
Confidence 99999998877665 357899999999999999988
No 13
>2bv1_A Regulator of G-protein signalling 1; RGS1, RGS, structural genomics, struct genomics consortium, B-cell activation, phosphorylation; 2.0A {Homo sapiens} PDB: 2gtp_C*
Probab=99.92 E-value=3.7e-25 Score=188.73 Aligned_cols=110 Identities=24% Similarity=0.483 Sum_probs=100.0
Q ss_pred CCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCC
Q psy3228 40 STSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGL 116 (410)
Q Consensus 40 s~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNI 116 (410)
.+++.++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++|++||+..+ .++.+.|+.||++||.++ +|||
T Consensus 13 ~~~~~~~~~~~~sl~~iL~~p~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~-~~~~~~a~~Iy~~yi~~~s~~evni 91 (145)
T 2bv1_A 13 VLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSEFSEENIEFWLACEDYKKTES-DLLPCKAEEIYKAFVHSDAAKQINI 91 (145)
T ss_dssp EEEHHHHHHTTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTSCG-GGHHHHHHHHHHHHTSTTCTTCCCC
T ss_pred CCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCc-HHHHHHHHHHHHHHCCCCCCcccCc
Confidence 345678999999999999999999999999999999999999999999999864 359999999999999885 8999
Q ss_pred CHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 117 SEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 117 PeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
+..+|..|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 92 ~~~~r~~i~~~l~-------~p~~~~Fd~aq~~V~~~m~~d 125 (145)
T 2bv1_A 92 DFRTRESTAKKIK-------APTPTCFDEAQKVIYTLMEKD 125 (145)
T ss_dssp CHHHHHHHHHHHT-------SCCTTTTHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHhhC
Confidence 9999998877664 368999999999999999887
No 14
>1fqi_A RGS9, regulator of G-protein signaling 9; phototransduction, ROD, GAP, signaling protein; 1.94A {Bos taurus} SCOP: a.91.1.1 PDB: 1fqj_B* 1fqk_B*
Probab=99.92 E-value=6.2e-25 Score=188.09 Aligned_cols=110 Identities=20% Similarity=0.432 Sum_probs=99.6
Q ss_pred CCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCC
Q psy3228 40 STSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGL 116 (410)
Q Consensus 40 s~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNI 116 (410)
.++..++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++|++||+. +.+++.+.|+.||++||.++ +|||
T Consensus 12 ~p~~~~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~~~enl~Fw~~ve~~k~~-~~~~~~~~a~~Iy~~yi~~~s~~evni 90 (147)
T 1fqi_A 12 IPTKMRVERWAFNFSELIRDPKGRQSFQHFLRKEFSGENLGFWEACEDLKYG-DQSKVKEKAEEIYKLFLAPGARRWINI 90 (147)
T ss_dssp CCCHHHHHHTTTCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTS-CGGGHHHHHHHHHHHHTSTTCTTCCCC
T ss_pred CCCHHHHHHHHhHHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHcCCCCCcccCC
Confidence 4566789999999999999999999999999999999999999999999998 45688999999999999886 8999
Q ss_pred CHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 117 SEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 117 PeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
+..+|..|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 91 ~~~~r~~i~~~l~-------~p~~~~Fd~aq~~V~~~m~~d 124 (147)
T 1fqi_A 91 DGKTMDITVKGLK-------HPHRYVLDAAQTHIYMLMKKD 124 (147)
T ss_dssp CHHHHHHHHHHTT-------SCCTTTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHhhC
Confidence 9999987765542 468899999999999999887
No 15
>2ebz_A RGS12, regulator of G-protein signaling 12; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=9.7e-25 Score=188.32 Aligned_cols=110 Identities=23% Similarity=0.492 Sum_probs=96.3
Q ss_pred CCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCC--CHHHHHHHHHHHHHhhhcCC---CC
Q psy3228 40 STSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQT--NQDQINLIVKCIYRRYFKDS---RL 114 (410)
Q Consensus 40 s~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~--D~ek~lKlAK~IYdKYIsss---EV 114 (410)
.+...++.+|+.+|+.||.||.|+.+|++||++++|.|||.||++|++||+.. +.+++.+.|+.||++||.++ +|
T Consensus 6 ~~~~~~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~~~a~~Iy~~yi~~~s~~ev 85 (155)
T 2ebz_A 6 SGRERRVASWAVSFERLLQDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATTPV 85 (155)
T ss_dssp CSSCCCTTHHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHSSSSCSSCC
T ss_pred CCcHhHHHHHHHhHHHHHCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHcCCCCCCcc
Confidence 34446899999999999999999999999999999999999999999999974 45688999999999999975 89
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 115 GLSEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 115 NIPeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
||+..+| +..++.+ .+++++||+||.+|+.+|+.|
T Consensus 86 ni~~~~r--~~~~~~~------~p~~~~Fd~aq~~V~~lm~~d 120 (155)
T 2ebz_A 86 NIDSQAQ--LADDVLR------APHPDMFKEQQLQIFNLMKFD 120 (155)
T ss_dssp SSCGGGC--HHHHHHH------SCCTTHHHHHHHHHHHHHHHT
T ss_pred CCCHHHH--HHHHHhc------CCCHHHHHHHHHHHHHHHHHC
Confidence 9999986 3333322 468999999999999999988
No 16
>2jnu_A RGS14, regulator of G-protein signaling 14; regulator of G-protein signalling domain, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.91 E-value=1.7e-25 Score=192.89 Aligned_cols=108 Identities=24% Similarity=0.476 Sum_probs=95.0
Q ss_pred ChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCC--HHHHHHHHHHHHHhhhcCC---CCCC
Q psy3228 42 SPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTN--QDQINLIVKCIYRRYFKDS---RLGL 116 (410)
Q Consensus 42 SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D--~ek~lKlAK~IYdKYIsss---EVNI 116 (410)
..+++.+|+.+|+.||.||.|+.+|++||++++|.|||.||++|++||+..+ .+++.+.|+.||++||.++ +|||
T Consensus 4 ~~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~~~Enl~Fw~~ve~~k~~~~~~~~~~~~~a~~Iy~~yi~~~s~~evni 83 (154)
T 2jnu_A 4 EEQPVASWALSFERLLQDPLGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEFLSSQALSPVNI 83 (154)
T ss_dssp SCCSGGGGGTCHHHHHHSHHHHHHHHHHTTTSSCTHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHTSTTCSSCCCS
T ss_pred chHhHHHHHHhHHHHHCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHcCCCCCcccCC
Confidence 4478999999999999999999999999999999999999999999999853 5688999999999999885 8999
Q ss_pred CHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 117 SEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 117 PeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
+..+|. +.+.+ ..+++++||+||.+|+.+|+.|
T Consensus 84 ~~~~r~-~~~~~-------~~p~~~~Fd~aq~~V~~lm~~d 116 (154)
T 2jnu_A 84 DRQAWL-GEEVL-------AEPRPDMFRAQQLQIFNLMKFD 116 (154)
T ss_dssp CCTTCC-CHHHH-------HSCCTTTTHHHHHHHHHHHHTT
T ss_pred cHHHHH-HHHHh-------cCCCHHHHHHHHHHHHHHHHhC
Confidence 999862 11222 1578999999999999999988
No 17
>2ihb_B Regulator of G-protein signalling 10, guanine nucleotide-binding protein G(K) subunit A; RGS, heterotrimeric G protein, signall complex; HET: GDP; 2.71A {Homo sapiens} PDB: 2i59_A
Probab=99.91 E-value=7.7e-25 Score=188.60 Aligned_cols=111 Identities=26% Similarity=0.454 Sum_probs=92.3
Q ss_pred CCCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCC
Q psy3228 39 LSTSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLG 115 (410)
Q Consensus 39 es~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVN 115 (410)
..++++++.+|+.+|+.||.||.|+.+|++||++++|.|||.||++|++||+..+.+++.+.|+.||++||.++ +||
T Consensus 21 ~~~~~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evN 100 (153)
T 2ihb_B 21 SHQSLKSTAKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVN 100 (153)
T ss_dssp ----CHHHHHHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSTTCTTCCC
T ss_pred CCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCCCCccCC
Confidence 45677899999999999999999999999999999999999999999999999888899999999999999985 899
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 116 LSEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 116 IPeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
|+..+|. +.+.+ ..+++++||+||.+|+.+|+.|
T Consensus 101 i~~~~r~-~~~~~-------~~p~~~~Fd~aq~~V~~~m~~d 134 (153)
T 2ihb_B 101 VEGQSRL-NEKIL-------EEPHPLMFQKLQDQIFNLMKYD 134 (153)
T ss_dssp CCC-------------------CCTTTTHHHHHHHHHHHHHT
T ss_pred CCHHHHH-HHHHh-------cCCCHHHHHHHHHHHHHHHHHC
Confidence 9999887 43222 2578899999999999999988
No 18
>1agr_E RGS4; GI-alpha-1, hydrolase, signal transduction, complex (signal transduction/regulator), GTP-binding, GTPase activating protein; HET: GDP CIT; 2.80A {Rattus norvegicus} SCOP: a.91.1.1 PDB: 1ezt_A 1ezy_A
Probab=99.90 E-value=3.5e-24 Score=195.89 Aligned_cols=111 Identities=23% Similarity=0.439 Sum_probs=101.8
Q ss_pred CCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCC
Q psy3228 40 STSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGL 116 (410)
Q Consensus 40 s~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNI 116 (410)
.++++++.+|+.+|+.||.||.|+.+|++||++|+|.|||.||++||+||+..+.+++.+.|+.||++||.++ +|||
T Consensus 50 ~~s~~~~~~w~~sle~IL~dp~g~~~F~~FL~~e~s~EnL~Fw~ave~yk~~~~~~~~~~~A~~Iy~~YI~~~Sp~evNI 129 (205)
T 1agr_E 50 RVSQEEVKKWAESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNL 129 (205)
T ss_dssp -CCHHHHHHHTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHCCCTTTHHHHHHHHHHHHTSTTCTTCCCC
T ss_pred CCCHHHHHHHHhhHHHHhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCchhhhc
Confidence 5677899999999999999999999999999999999999999999999998766789999999999999886 8999
Q ss_pred CHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 117 SEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 117 PeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
+..+|..|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 130 ~~~~r~~i~~~l~-------~p~~~lFd~aq~~V~~lM~~d 163 (205)
T 1agr_E 130 DSCTREETSRNML-------EPTITCFDEAQKKIFNLMEKD 163 (205)
T ss_dssp CHHHHHHHHHHTT-------SCCTTTTHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHh
Confidence 9999988776652 478999999999999999988
No 19
>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.87 E-value=1.1e-22 Score=204.67 Aligned_cols=128 Identities=19% Similarity=0.326 Sum_probs=111.5
Q ss_pred CCCCCCCCCCccCCCCCCCCCCCCCCCCCCCChhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhc
Q psy3228 11 PPDGFAPLGFEPEGGSDSSPSPSGGGEALSTSPPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKK 90 (410)
Q Consensus 11 ~~d~~adLGfEPEGsa~S~t~pgggG~~es~SpP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk 90 (410)
|...+.++|+++++..+ +.++++++.+|+.+|+.||.||.|+.+|++||++|+|.|||+||++||+||+
T Consensus 271 Pw~~~d~~~w~~~~~~~-----------~~pt~~~v~~w~~sle~LL~dp~g~~~F~~FL~~e~s~EnL~Fwlave~fk~ 339 (424)
T 2pbi_A 271 PWITDDTQFWDLNAKLV-----------EIPTKMRVERWAFNFSELIRDPKGRQSFQYFLKKEFSGENLGFWEACEDLKY 339 (424)
T ss_dssp HHHHCCTHHHHHTCTTC-----------SSCBHHHHHHTTTCHHHHHHSHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHH
T ss_pred CCCCCCccceeccCCCC-----------CCCCHHHHhhhhcCHHHHHCCHHHHHHHHHHHHHhCChHHHHHHHHHHHHhc
Confidence 33466778899988542 2345678999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhhcCC---CCCCCHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 91 QTNQDQINLIVKCIYRRYFKDS---RLGLSEECLSSVLEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 91 ~~D~ek~lKlAK~IYdKYIsss---EVNIPeqVRkeIkeRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
. +.+++.+.|+.||++||.++ +|||+..+|..|.+.+. .+++++||+||.+|+.+|+.|
T Consensus 340 ~-~~~~~~~~A~~Iy~~YI~~~Sp~eVNId~~~r~~i~~~l~-------~P~~~lFd~AQ~~V~~lM~~D 401 (424)
T 2pbi_A 340 G-DQSKVKEKAEEIYKLFLAPGARRWINIDGKTMDITVKGLR-------HPHRYVLDAAQTHIYMLMKKD 401 (424)
T ss_dssp S-CSSSHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHHHHTT-------SCCTTTTHHHHHHHHHHHHHT
T ss_pred C-CHHHHHHHHHHHHHHHcCCCCccccCCCHHHHHHHHHHHh-------CCCHHHHHHHHHHHHHHHhhC
Confidence 7 44678999999999999886 89999999988766553 468899999999999999988
No 20
>3cx8_B RHO guanine nucleotide exchange factor 11; signal transduction, protein complex, GTP-binding, lipoprotein, membrane, nucleotide-binding; HET: GSP; 2.00A {Rattus norvegicus} PDB: 3cx6_B* 3cx7_B* 1htj_F
Probab=98.20 E-value=9.4e-06 Score=75.74 Aligned_cols=102 Identities=19% Similarity=0.275 Sum_probs=89.3
Q ss_pred HHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCCCHHHHHHHHH
Q psy3228 50 AKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGLSEECLSSVLE 126 (410)
Q Consensus 50 A~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNIPeqVRkeIke 126 (410)
=.+|+.|...|..+..|..|+-..+--+.|.||+-.+-||.. +.+++++.|..||..||.++ .|+||..+..+|++
T Consensus 23 F~sle~Lk~rPAHLavFL~yvlsq~dP~~LlfyL~~d~yk~~-~~Ke~rk~a~ei~stFL~~~ApL~v~vp~~~~~eid~ 101 (203)
T 3cx8_B 23 FQDLEKLKSHPAYLVVFLRYILSQADPGPLLFYLCSEVYQQT-NPKDSRSLGKDIWNIFLEKNAPLRVKIPEMLQAEIDL 101 (203)
T ss_dssp HHCHHHHHTCHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHTS-CTTTCHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHHH
T ss_pred ccCHHHHhcCcHHHHHHHHHHHhcCCchHHHHHHHHHHHhcc-ChHHHHHHHHHHHHHHhcCCCCccccCCHHHHHHHHH
Confidence 457999999999999999999999999999999999999998 56799999999999999997 68999999999998
Q ss_pred HHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 127 DIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 127 RIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
++... +.-+.+|.++|..+...+.+.
T Consensus 102 ~L~~e-----e~~R~~f~~~q~~~~~~I~~q 127 (203)
T 3cx8_B 102 RLRNN-----EDPRNVLCEAQEAVMLEIQEQ 127 (203)
T ss_dssp HHHTT-----CCCHHHHHHHHHHHHHHHHHH
T ss_pred Hhcch-----HHHHHHHHHHHHHHHHHHHHH
Confidence 87642 557899999887776666544
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=97.64 E-value=0.00012 Score=78.05 Aligned_cols=101 Identities=15% Similarity=0.259 Sum_probs=78.8
Q ss_pred hHHHHhCChHHHHHHHHHHHhc--CChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC----CCCCCHHHHHHHH
Q psy3228 52 SFNNLLNDPEGLHLFRKYLASE--NQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS----RLGLSEECLSSVL 125 (410)
Q Consensus 52 SLesLL~DP~GrqLFReFLeqE--fSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss----EVNIPeqVRkeIk 125 (410)
.++.|..-|.|+.+|++|+.+. .....+.||.+|++|....+.+++...++.||++||.+. .-.++..+...+.
T Consensus 54 ~~~~i~~q~ig~~~f~~f~~~~~~~~~~~~~~~~~v~~~~~~~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (689)
T 3v5w_A 54 TFEKIFSQKLGYLLFRDFCLNHLEEARPLVEFYEEIKKYEKLETEEERVARSREIFDSYIMKELLACSHPFSKSATEHVQ 133 (689)
T ss_dssp SHHHHHTSHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTSHHHHHHHSSSSCCCHHHHHHHH
T ss_pred ccceecCccHHHHHHHHHhcCcchhhhHHHHHHHHHHhhhccCchhhHHHHHHHHHHHhcchhhhhccCccchHHHHHHH
Confidence 5777888999999999997654 455689999999999998888899999999999999764 1246777666555
Q ss_pred HHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 126 EDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 126 eRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
+.+.+ ..+..++|..+.++|...|...
T Consensus 134 ~~~~~-----~~~~~~lf~~~~~~~~~~l~~~ 160 (689)
T 3v5w_A 134 GHLGK-----KQVPPDLFQPYIEEICQNLRGD 160 (689)
T ss_dssp HHHHT-----TCCCTTTTHHHHHHHHHHHTTH
T ss_pred Hhhhh-----ccCChHHHHHHHHHHHHHhccC
Confidence 44432 2466789999998888766555
No 22
>1iap_A Guanine nucleotide exchange factor P115rhogef; RGS, RGRGS, signaling protein; 1.90A {Homo sapiens} SCOP: a.91.1.1
Probab=97.52 E-value=0.00014 Score=68.19 Aligned_cols=95 Identities=12% Similarity=0.127 Sum_probs=77.2
Q ss_pred hHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCCCHHHHHHHHHHH
Q psy3228 52 SFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGLSEECLSSVLEDI 128 (410)
Q Consensus 52 SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNIPeqVRkeIkeRI 128 (410)
+|+.|...|..+..|..|+-..+--..|.||+-.+-||.. +.+++++.|..||..||.++ .++||+.+..+|+++.
T Consensus 7 sl~~Lk~rPAHLaVFL~yV~sq~DPspLLfYL~tdlYk~~-~~Ke~rk~~~Ei~stFL~~~ApL~v~v~e~i~~eiD~~r 85 (211)
T 1iap_A 7 SLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSL-GPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTR 85 (211)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHTTCC
T ss_pred CHHHHhhccHHHHHHHHHHHHcCCchhhHHHHHHHHHhcc-ChHHHHHHHHHHHHHHhCCCCCccccCCHHHHHHHHHHH
Confidence 6889999999999999999999999999999999999998 68899999999999999997 5789999988887652
Q ss_pred HHhhccCCCCChhHHHHHHHH
Q psy3228 129 RAASRTSPNLSSRMFAESQLE 149 (410)
Q Consensus 129 KE~i~nk~~pdpdmFDeAQ~E 149 (410)
.+.+ ..+....+|.+||..
T Consensus 86 ~~l~--~ee~~R~~~~~~r~~ 104 (211)
T 1iap_A 86 ADLI--SEDVQRRFVQEVVQS 104 (211)
T ss_dssp TTTC--CHHHHHHHHHHHHHT
T ss_pred hhhc--cHHHHHHHHHHHHHH
Confidence 2211 112345566666533
No 23
>3ab3_B RHO guanine nucleotide exchange factor 1; signal transduction, protein complex, GTP-binding, membrane, transducer, lipoprotein, nucleotide-binding; HET: GDP; 2.40A {Homo sapiens} PDB: 1shz_C*
Probab=97.52 E-value=4.5e-05 Score=72.84 Aligned_cols=101 Identities=11% Similarity=0.123 Sum_probs=72.1
Q ss_pred hHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC---CCCCCHHHHHHHHHHH
Q psy3228 52 SFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS---RLGLSEECLSSVLEDI 128 (410)
Q Consensus 52 SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss---EVNIPeqVRkeIkeRI 128 (410)
+|+.|...|..+..|..|+-..+--..|.||+-.+-||.. +.+++++.|..||..||.++ .++||+.+..+|+++.
T Consensus 61 sle~Lk~rPAHLaVFL~yV~sq~DPspLLfYL~tdlYk~~-~~Ke~Rk~a~Ei~stFL~~~ApL~v~v~e~ia~eID~~r 139 (246)
T 3ab3_B 61 SLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSL-GPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTR 139 (246)
T ss_dssp SGGGTTTCHHHHHHHHHHHHHHSCSHHHHHHHHHHHHC--------CCTTHHHHHHTTSTTCTTCCCCCTTGGGC-----
T ss_pred CHHHHhccchHHHHHHHHHHhcCCchhhHHHHHHHHHhcc-ChHHHHHHHHHHHHHHcCCCCCccccCCHHHHHHHHHHH
Confidence 6888899999999999999999999999999999999998 57899999999999999987 6889999999998887
Q ss_pred HHhhccCCCCChhHHHHHHHHHHHHHh
Q psy3228 129 RAASRTSPNLSSRMFAESQLEVERIIN 155 (410)
Q Consensus 129 KE~i~nk~~pdpdmFDeAQ~EIynLME 155 (410)
.+.+ ..++.+..|.+||..+...+.
T Consensus 140 ~~~~--~ee~~R~~~~~~r~~~~~eI~ 164 (246)
T 3ab3_B 140 ADLI--SEDVQRRFVQEVVQSQQVAVG 164 (246)
T ss_dssp ---------CHHHHHHHHHHTTHHHHH
T ss_pred HhhC--hHHHHHHHHHHHHHHHHHHHH
Confidence 6643 335667788877765554443
No 24
>4gou_A EHRGS-rhogef; RGS domain, DH domain, PH domain, RHO guanine nucleotide EXC factor, signaling protein, GTPase accelerating protein; 2.30A {Entamoeba histolytica}
Probab=97.45 E-value=0.00055 Score=67.73 Aligned_cols=102 Identities=19% Similarity=0.286 Sum_probs=84.6
Q ss_pred hHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHh----hhcCCCHHHHHHHHHHHHHhhhcCC---CCCCCHHHHHHH
Q psy3228 52 SFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEG----LKKQTNQDQINLIVKCIYRRYFKDS---RLGLSEECLSSV 124 (410)
Q Consensus 52 SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEg----FKk~~D~ek~lKlAK~IYdKYIsss---EVNIPeqVRkeI 124 (410)
.|.++|+|..-..+.|-||..|-++|||+|...|-- |.++ .++-+++...-|-++|+..+ ++|++-++...|
T Consensus 15 tlqevledsfmkrllrcylsderseenldflesvglyesqfdkl-tpkvrlealnfikdqfldrnserqvnlsyqiqqsi 93 (518)
T 4gou_A 15 TLQEVLEDSFMKRLLRCYLSDERSEENLDFLESVGLYESQFDKL-TPKVRLEALNFIKDQFLDRNSERQVNLSYQIQQSI 93 (518)
T ss_dssp CHHHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHGGGS-CHHHHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcccccchhhhhHHHhccchHhhhhhc-CchhhHHHHHhHHHHhhcccchhhcchhHHHHHHH
Confidence 389999999999999999999999999999988764 4555 35566666777999999765 799999999999
Q ss_pred HHHHHHhhccCCCCChhHHHHHHHHHHHHHhhc
Q psy3228 125 LEDIRAASRTSPNLSSRMFAESQLEVERIINVV 157 (410)
Q Consensus 125 keRIKE~i~nk~~pdpdmFDeAQ~EIynLMEdD 157 (410)
.+++.+.+ .....++|.+|.+.-..|+-..
T Consensus 94 lkklsevt---snapkdvfneakkateyllyte 123 (518)
T 4gou_A 94 LKKLSEVT---SNAPKDVFNEAKKATEYLLYTE 123 (518)
T ss_dssp HHHHHTCC---SSCCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHh---cCCChHHHHHHHhhhHHhhhHH
Confidence 99888864 3567899999998877777544
No 25
>3utm_C Axin-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=97.03 E-value=0.00022 Score=58.56 Aligned_cols=25 Identities=40% Similarity=0.622 Sum_probs=17.9
Q ss_pred EeccCCCCCCCCCCCCccCCCCCCCC
Q psy3228 5 EITTYPPPDGFAPLGFEPEGGSDSSP 30 (410)
Q Consensus 5 ~~~t~t~~d~~adLGfEPEGsa~S~t 30 (410)
|-+++|+++.+.|||||||||| |+|
T Consensus 58 ~~~~~tpRR~~~dLGyEPEGSA-SPt 82 (83)
T 3utm_C 58 ETSTATPRRSDLDLGYEPEGSA-SPT 82 (83)
T ss_dssp -----CBSCSSSCCCBCCSCCS-CC-
T ss_pred CCCcCCcCcccCCcccCCCccC-CCC
Confidence 4578999999999999999999 455
No 26
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=96.90 E-value=0.003 Score=65.36 Aligned_cols=97 Identities=12% Similarity=0.256 Sum_probs=73.4
Q ss_pred hHHHHh-CChHHHHHHHHHHHhc-CChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCCC----CCCCHHHHHHHH
Q psy3228 52 SFNNLL-NDPEGLHLFRKYLASE-NQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDSR----LGLSEECLSSVL 125 (410)
Q Consensus 52 SLesLL-~DP~GrqLFReFLeqE-fSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsssE----VNIPeqVRkeIk 125 (410)
.++.|- ..|.|+.+|++||... .....+.||-+|+.|+... .+++.+.|+.|+++|+.+.. -.||.++.....
T Consensus 52 ~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 130 (576)
T 2acx_A 52 DYHSLCERNPIGRLLFREFCATRPELSRCVAFLDGVAEYEVTP-DDKRKACGRNLTQNFLSHTGPDLIPEVPRQLVTNCT 130 (576)
T ss_dssp CHHHHHTTSHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHTSC-TTTHHHHHHHHHHHHSCSSSCCSSTTCCHHHHHHHH
T ss_pred CHHHhhccCchhHHHHHHHHhcCcchhHHHHHHHHHHhhhccc-chhHHHHHHHHHHHhcCcccccccccCCHHHHHHHH
Confidence 677786 5799999999999955 4667889999999999974 46889999999999998851 137888766645
Q ss_pred HHHHHhhccCCCCChhHHHHHHHHHHHHHh
Q psy3228 126 EDIRAASRTSPNLSSRMFAESQLEVERIIN 155 (410)
Q Consensus 126 eRIKE~i~nk~~pdpdmFDeAQ~EIynLME 155 (410)
.++.+ .+..++|.+....++..+.
T Consensus 131 ~~l~~------~~~~~~~~~l~~~~~~~l~ 154 (576)
T 2acx_A 131 QRLEQ------GPCKDLFQELTRLTHEYLS 154 (576)
T ss_dssp HHHHH------CCCTTTTHHHHHHHHHHHT
T ss_pred HHHhc------CchHHHHHHHHHHHHHhhc
Confidence 55544 2355677777666666553
No 27
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=79.26 E-value=3.9 Score=41.76 Aligned_cols=55 Identities=18% Similarity=0.404 Sum_probs=45.4
Q ss_pred hCChHHHHHHHHHHHhcC-ChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhcCC
Q psy3228 57 LNDPEGLHLFRKYLASEN-QSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFKDS 112 (410)
Q Consensus 57 L~DP~GrqLFReFLeqEf-SeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIsss 112 (410)
|..|.|..+|++||.... ......||-.++.|.... .+.+.+.|+.|+++|+..+
T Consensus 63 ~~~~ig~~~~~~f~~t~~~~~~~~~~~~~i~e~~~~~-~~~~~~~~~~l~~~~~~~~ 118 (543)
T 3c4z_A 63 LEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTAD-DALRPQKAQALRAAYLEPQ 118 (543)
T ss_dssp TSSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTSC-TTTHHHHHHHHHHHHTSTT
T ss_pred ccCcccHHHHHHHHhcCCchhHHHHHHhhhhhhccCc-hhhHHHHHHHHHHHhhCch
Confidence 457889999999999663 346678999999999863 3578889999999999885
No 28
>2pih_A Protein YMCA; regulate community development, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.281.1.1
Probab=44.88 E-value=1.2e+02 Score=26.10 Aligned_cols=62 Identities=8% Similarity=0.056 Sum_probs=41.0
Q ss_pred hhhHHHHHHhHHHHhCChHHHHHHHHHHHhcCChhhHHHHHHHHhhhcCCCHHHHHHHHHHHHHhhhc
Q psy3228 43 PPNYLEWAKSFNNLLNDPEGLHLFRKYLASENQSDLLEFWFACEGLKKQTNQDQINLIVKCIYRRYFK 110 (410)
Q Consensus 43 pP~~lrWA~SLesLL~DP~GrqLFReFLeqEfSeENLdFWLAcEgFKk~~D~ek~lKlAK~IYdKYIs 110 (410)
.+.|..+......|-.|+....+|.+|.+.....++. ..|.+..+.++..+.++.++++.-.
T Consensus 23 seeyk~yk~A~~~i~~D~eaq~li~eF~~~Q~~~~~~------q~~Gk~~~~~e~~~el~~l~~~l~~ 84 (151)
T 2pih_A 23 TEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNL------KHYEKHEALKQVEAKIDALQEELEE 84 (151)
T ss_dssp BHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH------HHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH------HHcCCccchHHHHHHHHHHHHHHHc
Confidence 3678888888899999999999999998864332222 2233221234566666777776654
Done!