Query         psy323
Match_columns 255
No_of_seqs    136 out of 2499
Neff          9.9 
Searched_HMMs 29240
Date          Fri Aug 16 19:41:49 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy323.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/323hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4fih_A Serine/threonine-protei 100.0   9E-44 3.1E-48  299.4   4.6  197    7-255   118-329 (346)
  2 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.8E-43   2E-47  290.4   3.4  194    7-255    79-296 (311)
  3 3hyh_A Carbon catabolite-derep 100.0 2.4E-43 8.3E-48  288.6   0.8  193    7-254    60-267 (275)
  4 4fie_A Serine/threonine-protei 100.0 1.7E-42 5.9E-47  298.4   4.8  197    7-255   195-406 (423)
  5 3fpq_A Serine/threonine-protei 100.0 3.5E-42 1.2E-46  284.0   3.9  197    7-255    72-288 (290)
  6 3ubd_A Ribosomal protein S6 ki 100.0 2.6E-42 8.9E-47  286.2   3.0  195    6-255    72-287 (304)
  7 4b99_A Mitogen-activated prote 100.0 5.5E-42 1.9E-46  295.0   4.6  225    8-255   101-350 (398)
  8 4b9d_A Serine/threonine-protei 100.0 1.3E-42 4.6E-47  292.6   0.7  195    7-255    70-282 (350)
  9 4f9c_A Cell division cycle 7-r 100.0 1.1E-40 3.8E-45  283.8   7.4  237    8-255    67-358 (361)
 10 4g3f_A NF-kappa-beta-inducing  100.0 3.6E-40 1.2E-44  276.6   4.5  197    7-255    97-328 (336)
 11 3uto_A Twitchin; kinase, muscl 100.0 2.5E-39 8.7E-44  290.6   4.2  199    7-255   201-416 (573)
 12 4g31_A Eukaryotic translation  100.0   8E-38 2.7E-42  259.7   4.5  194    7-255    50-285 (299)
 13 3omv_A RAF proto-oncogene seri 100.0 8.4E-38 2.9E-42  259.7   3.7  197    7-253    79-303 (307)
 14 3v5w_A G-protein coupled recep 100.0 2.2E-37 7.5E-42  278.4   6.2  193   10-255   242-455 (689)
 15 4asz_A BDNF/NT-3 growth factor 100.0 1.2E-37   4E-42  258.5   0.9  188    7-248    62-281 (299)
 16 3ttj_A Mitogen-activated prote 100.0 1.5E-36   5E-41  266.9   7.0  229    8-254   109-360 (464)
 17 4aoj_A High affinity nerve gro 100.0 3.3E-37 1.1E-41  259.1   2.5  190    7-250    90-313 (329)
 18 4gt4_A Tyrosine-protein kinase 100.0 2.9E-37 9.9E-42  257.1   2.0  190    7-250    76-300 (308)
 19 1wak_A Serine/threonine-protei 100.0 1.3E-35 4.3E-40  255.5  11.5  238    8-255    81-397 (397)
 20 4e7w_A Glycogen synthase kinas 100.0 4.8E-36 1.6E-40  258.7   6.9  225    7-255    79-327 (394)
 21 3oz6_A Mitogen-activated prote 100.0 5.5E-36 1.9E-40  257.7   6.8  236    9-255    57-334 (388)
 22 1cm8_A Phosphorylated MAP kina 100.0 6.3E-36 2.2E-40  255.6   6.1  219    8-255    72-313 (367)
 23 4ase_A Vascular endothelial gr 100.0 3.5E-36 1.2E-40  254.8   3.4  192    7-250   114-341 (353)
 24 3eb0_A Putative uncharacterize 100.0 1.2E-35 4.2E-40  255.1   5.5  225    6-254    46-326 (383)
 25 3niz_A Rhodanese family protei 100.0 9.8E-36 3.4E-40  248.9   4.8  223    8-255    67-306 (311)
 26 1q8y_A SR protein kinase; tran 100.0 6.2E-35 2.1E-39  249.4   9.3  239    8-255    63-339 (373)
 27 1j1b_A Glycogen synthase kinas 100.0 1.9E-35 6.6E-40  256.9   6.0  224    7-254    94-341 (420)
 28 3g33_A Cell division protein k 100.0 3.4E-35 1.2E-39  245.0   6.4  220    9-255    60-302 (308)
 29 3rp9_A Mitogen-activated prote 100.0 3.2E-35 1.1E-39  258.2   6.5  227    8-255   100-402 (458)
 30 3o0g_A Cell division protein k 100.0   4E-35 1.4E-39  242.8   6.5  220    9-255    50-288 (292)
 31 2yab_A Death-associated protei 100.0 3.6E-35 1.2E-39  250.3   6.1  198    7-254    62-277 (361)
 32 2fst_X Mitogen-activated prote 100.0 2.6E-35 8.8E-40  251.8   4.7  222    9-255    77-317 (367)
 33 3fe3_A MAP/microtubule affinit 100.0 6.2E-35 2.1E-39  245.8   6.9  193    8-255    62-270 (328)
 34 2pmi_A Negative RE, cyclin-dep 100.0 4.3E-35 1.5E-39  245.6   4.6  227    8-255    51-299 (317)
 35 1ob3_A PFPK5, cell division co 100.0 4.2E-35 1.4E-39  242.3   4.4  220    9-255    49-286 (288)
 36 3kvw_A DYRK2, dual specificity 100.0 3.5E-34 1.2E-38  249.6   9.2  225    9-255   142-414 (429)
 37 3n9x_A Phosphotransferase; mal 100.0 7.8E-35 2.7E-39  254.0   3.9  231    8-255    73-367 (432)
 38 3mtl_A Cell division protein k 100.0 1.1E-34 3.9E-39  243.8   4.0  225    6-255    46-287 (324)
 39 1tki_A Titin; serine kinase, m 100.0   1E-34 3.4E-39  243.9   3.2  198    8-255    49-263 (321)
 40 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.2E-35 2.5E-39  245.5   2.0  225    7-255    80-324 (329)
 41 3rgf_A Cyclin-dependent kinase 100.0 1.4E-34 4.7E-39  250.4   3.8  239    8-255    66-339 (405)
 42 2y0a_A Death-associated protei 100.0 3.6E-34 1.2E-38  240.9   6.0  198    7-255    61-277 (326)
 43 3qyz_A Mitogen-activated prote 100.0 1.8E-34 6.2E-39  246.2   3.9  225    8-255    73-319 (364)
 44 3e3p_A Protein kinase, putativ 100.0 1.2E-33   4E-38  240.5   8.5  225   10-255    69-320 (360)
 45 3llt_A Serine/threonine kinase 100.0   4E-33 1.4E-37  237.3  11.8  234    8-254    79-360 (360)
 46 1ua2_A CAK, cell division prot 100.0 2.2E-34 7.4E-39  244.1   3.7  220    9-255    61-297 (346)
 47 3soa_A Calcium/calmodulin-depe 100.0 6.6E-34 2.2E-38  248.6   6.1  198    7-254    57-272 (444)
 48 2bdw_A Hypothetical protein K1 100.0 4.8E-34 1.6E-38  243.5   4.9  198    7-254    75-289 (362)
 49 2xrw_A Mitogen-activated prote 100.0 2.9E-34 9.8E-39  245.7   3.0  229    8-254    72-323 (371)
 50 3mi9_A Cell division protein k 100.0 9.4E-34 3.2E-38  240.5   5.8  225    9-255    65-317 (351)
 51 3fxz_A Serine/threonine-protei 100.0 1.1E-33 3.8E-38  235.0   5.8  195    8-254    65-274 (297)
 52 3zgw_A Maternal embryonic leuc 100.0 5.4E-34 1.8E-38  241.7   3.0  193    8-255    56-266 (347)
 53 4exu_A Mitogen-activated prote 100.0 9.5E-34 3.3E-38  242.4   4.5  222    8-255    89-329 (371)
 54 2x4f_A Myosin light chain kina 100.0 3.8E-34 1.3E-38  245.1   1.9  199    7-255   133-348 (373)
 55 2vx3_A Dual specificity tyrosi 100.0 2.7E-33 9.3E-38  240.4   7.1  188   57-255   152-378 (382)
 56 1kob_A Twitchin; kinase, intra 100.0 9.9E-34 3.4E-38  243.5   4.1  199    7-255    95-310 (387)
 57 3coi_A Mitogen-activated prote 100.0 4.7E-33 1.6E-37  236.4   8.0  221    8-255    71-311 (353)
 58 1o6l_A RAC-beta serine/threoni 100.0 2.5E-33 8.5E-38  236.8   6.1  193    8-255    53-266 (337)
 59 1fot_A TPK1 delta, CAMP-depend 100.0 2.7E-33 9.2E-38  234.9   6.0  191    8-255    54-264 (318)
 60 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.5E-34 2.2E-38  240.3   1.9  193    7-254    56-263 (336)
 61 4dc2_A Protein kinase C IOTA t 100.0 3.1E-33 1.1E-37  240.8   5.7  199    9-255   101-324 (396)
 62 4agu_A Cyclin-dependent kinase 100.0 3.3E-33 1.1E-37  233.1   5.5  223    9-255    51-290 (311)
 63 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.5E-33 5.3E-38  239.5   3.5  192    9-255    72-286 (353)
 64 2r3i_A Cell division protein k 100.0 2.6E-33 8.8E-38  232.4   3.8  222    8-255    50-289 (299)
 65 4fr4_A YANK1, serine/threonine 100.0 7.1E-33 2.4E-37  237.7   6.6  196    8-255    63-277 (384)
 66 2w4o_A Calcium/calmodulin-depe 100.0 3.5E-33 1.2E-37  237.1   4.5  200    6-255    94-311 (349)
 67 3dls_A PAS domain-containing s 100.0 2.5E-33 8.5E-38  236.7   2.6  188    7-255    76-280 (335)
 68 2a2a_A Death-associated protei 100.0 8.6E-33 2.9E-37  231.9   5.8  198    7-255    62-278 (321)
 69 1blx_A Cyclin-dependent kinase 100.0 1.6E-32 5.4E-37  230.3   7.4  218    9-255    60-302 (326)
 70 3pg1_A Mitogen-activated prote 100.0 4.4E-33 1.5E-37  237.3   3.8  227    7-255    76-322 (362)
 71 2y94_A 5'-AMP-activated protei 100.0 3.9E-33 1.3E-37  245.4   3.4  194    7-255    63-272 (476)
 72 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.5E-33 2.6E-37  235.1   5.0  191    8-255    89-299 (350)
 73 3a62_A Ribosomal protein S6 ki 100.0 6.4E-33 2.2E-37  233.4   4.5  194    7-255    68-282 (327)
 74 1xjd_A Protein kinase C, theta 100.0 7.2E-33 2.5E-37  234.7   4.8  192    9-255    66-275 (345)
 75 3mwu_A Calmodulin-domain prote 100.0 3.8E-33 1.3E-37  246.7   3.1  196    8-254    69-281 (486)
 76 2eue_A Carbon catabolite derep 100.0 2.4E-33 8.2E-38  230.1   1.3  194    7-255    60-268 (275)
 77 3nyv_A Calmodulin-domain prote 100.0 2.6E-33 8.7E-38  247.7   1.6  196    8-254    74-286 (484)
 78 3c0i_A Peripheral plasma membr 100.0 5.6E-33 1.9E-37  236.0   3.6  198    7-255    73-292 (351)
 79 3tki_A Serine/threonine-protei 100.0 1.1E-32 3.9E-37  231.5   4.9  198    6-255    51-267 (323)
 80 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-32 4.6E-37  228.2   5.3  197    7-255    83-298 (298)
 81 2acx_A G protein-coupled recep 100.0 1.3E-32 4.5E-37  245.9   5.6  197    8-255   232-450 (576)
 82 3nsz_A CK II alpha, casein kin 100.0 2.5E-32 8.7E-37  229.6   6.9  229    7-255    77-325 (330)
 83 3a8x_A Protein kinase C IOTA t 100.0 3.3E-32 1.1E-36  230.7   7.6  200    8-255    57-281 (345)
 84 4ejn_A RAC-alpha serine/threon 100.0 1.1E-32 3.7E-37  241.3   4.7  194    7-255   195-410 (446)
 85 4aaa_A Cyclin-dependent kinase 100.0   5E-33 1.7E-37  234.3   2.2  223    8-254    72-311 (331)
 86 1z57_A Dual specificity protei 100.0 5.1E-32 1.8E-36  227.9   7.9  229    8-255    59-334 (339)
 87 3v8s_A RHO-associated protein  100.0 4.2E-33 1.4E-37  241.1   1.2  198    7-255   116-335 (410)
 88 2c30_A Serine/threonine-protei 100.0 2.8E-32 9.7E-37  228.9   6.2  196    8-255    90-300 (321)
 89 2b9h_A MAP kinase FUS3, mitoge 100.0   2E-32 6.9E-37  232.2   5.1  225    9-255    58-311 (353)
 90 4aw2_A Serine/threonine-protei 100.0 1.3E-32 4.4E-37  239.8   3.8  199    7-255   121-344 (437)
 91 3uc3_A Serine/threonine-protei 100.0 5.1E-33 1.8E-37  237.1   1.2  198    8-254    64-279 (361)
 92 2eu9_A Dual specificity protei 100.0 5.9E-32   2E-36  229.1   7.7  228    9-255    65-339 (355)
 93 3kk8_A Calcium/calmodulin depe 100.0 1.4E-32 4.9E-37  226.3   3.8  198    8-255    53-267 (284)
 94 3lij_A Calcium/calmodulin depe 100.0 8.1E-33 2.8E-37  245.1   2.4  196    8-254    84-296 (494)
 95 2y7j_A Phosphorylase B kinase  100.0   5E-32 1.7E-36  231.3   7.2  197    8-255   147-365 (365)
 96 2qr7_A Ribosomal protein S6 ki 100.0 5.3E-33 1.8E-37  235.3   1.2  201    7-254    62-282 (342)
 97 3i6u_A CDS1, serine/threonine- 100.0 1.9E-32 6.4E-37  238.0   4.2  199    7-255   187-405 (419)
 98 3lm5_A Serine/threonine-protei 100.0 4.1E-32 1.4E-36  228.4   6.0  198    8-255    76-293 (327)
 99 3q5i_A Protein kinase; CDPK, m 100.0 1.2E-32   4E-37  244.6   2.8  196    8-254    94-306 (504)
100 2i0e_A Protein kinase C-beta I 100.0 3.7E-32 1.3E-36  231.0   5.6  192    9-255    69-282 (353)
101 3f3z_A Calcium/calmodulin-depe 100.0 2.2E-32 7.5E-37  224.5   3.9  196    8-254    54-266 (277)
102 3is5_A Calcium-dependent prote 100.0 4.4E-32 1.5E-36  223.9   4.9  196    8-255    68-284 (285)
103 1nxk_A MAP kinase-activated pr 100.0 2.1E-32 7.2E-37  236.3   1.7  200    9-254   103-326 (400)
104 3gni_B Strad alpha; kinase fol 100.0 3.3E-32 1.1E-36  234.2   2.8  229    8-255    74-339 (389)
105 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.5E-31   5E-36  238.3   6.9  196    8-255   233-454 (543)
106 3kn6_A Ribosomal protein S6 ki 100.0   4E-32 1.4E-36  228.4   3.0  204    8-255    53-276 (325)
107 2r5t_A Serine/threonine-protei 100.0 6.1E-32 2.1E-36  231.2   3.1  192    9-255    87-299 (373)
108 3hko_A Calcium/calmodulin-depe 100.0 4.4E-32 1.5E-36  229.4   1.8  198    7-255    75-336 (345)
109 2i6l_A Mitogen-activated prote 100.0 9.9E-32 3.4E-36  224.6   3.9  225    8-255    56-311 (320)
110 2vd5_A DMPK protein; serine/th 100.0 5.5E-32 1.9E-36  234.2   2.4  198    7-255   108-333 (412)
111 3fdn_A Serine/threonine-protei 100.0 6.1E-32 2.1E-36  222.2   2.2  192    7-254    56-262 (279)
112 3p1a_A MYT1 kinase, membrane-a 100.0 1.7E-31 5.9E-36  223.1   4.8  182   17-255   114-310 (311)
113 3bhy_A Death-associated protei 100.0 7.9E-32 2.7E-36  221.8   2.7  197    7-254    55-270 (283)
114 1u5q_A Serine/threonine protei 100.0 1.1E-31 3.7E-36  227.8   2.7  192    7-254   101-310 (348)
115 3hmm_A TGF-beta receptor type- 100.0 2.6E-32 9.1E-37  227.2  -1.1  203   10-249    47-290 (303)
116 1phk_A Phosphorylase kinase; g 100.0 4.9E-31 1.7E-35  218.6   6.3  197    8-255    71-289 (298)
117 3pfq_A PKC-B, PKC-beta, protei 100.0 3.2E-31 1.1E-35  242.5   5.4  192    9-255   390-603 (674)
118 1t4h_A Serine/threonine-protei 100.0 4.2E-31 1.4E-35  218.4   5.0  196    8-255    73-288 (290)
119 3cok_A Serine/threonine-protei 100.0 7.1E-32 2.4E-36  221.6   0.3  194    7-255    58-268 (278)
120 2ycf_A Serine/threonine-protei 100.0 2.5E-31 8.4E-36  223.0   3.5  198    7-255    62-280 (322)
121 2vgo_A Serine/threonine-protei 100.0 1.9E-31 6.6E-36  219.7   2.7  192    7-254    61-267 (284)
122 2jam_A Calcium/calmodulin-depe 100.0 1.9E-31 6.4E-36  222.0   2.3  197    7-254    53-266 (304)
123 2owb_A Serine/threonine-protei 100.0 4.9E-31 1.7E-35  222.6   3.9  193    8-255    89-297 (335)
124 2yex_A Serine/threonine-protei 100.0 1.1E-30 3.6E-35  214.2   5.8  196    8-255    53-267 (276)
125 2h6d_A 5'-AMP-activated protei 100.0 2.5E-31 8.5E-36  218.0   1.9  194    7-255    58-267 (276)
126 2ac3_A MAP kinase-interacting  100.0 7.3E-31 2.5E-35  219.4   4.6  203    8-255    58-301 (316)
127 4euu_A Serine/threonine-protei 100.0 4.9E-31 1.7E-35  220.9   3.3  219    9-251    56-304 (319)
128 3eqc_A Dual specificity mitoge 100.0 4.2E-32 1.4E-36  231.1  -3.4  228    7-254    78-329 (360)
129 3qd2_B Eukaryotic translation  100.0   1E-30 3.5E-35  219.5   4.6  145   58-255   160-331 (332)
130 3dbq_A Dual specificity protei 100.0 3.2E-31 1.1E-35  224.3   1.6  194    8-254    55-278 (343)
131 3byv_A Rhoptry kinase; malaria 100.0 1.2E-31   4E-36  229.9  -1.3  138   60-254   204-364 (377)
132 2rku_A Serine/threonine-protei 100.0 5.8E-31   2E-35  217.9   2.9  193    8-255    63-271 (294)
133 2vwi_A Serine/threonine-protei 100.0 2.2E-31 7.5E-36  220.9   0.0  205    6-255    59-293 (303)
134 1vzo_A Ribosomal protein S6 ki 100.0 3.6E-30 1.2E-34  219.0   7.4  199    6-255   104-327 (355)
135 3com_A Serine/threonine-protei 100.0 7.9E-31 2.7E-35  219.0   3.0  196    8-255    72-284 (314)
136 2zmd_A Dual specificity protei 100.0 7.3E-31 2.5E-35  226.0   2.2  194    8-254   102-325 (390)
137 3fme_A Dual specificity mitoge 100.0   4E-31 1.4E-35  218.2   0.5  193   10-254    56-271 (290)
138 2wei_A Calmodulin-domain prote 100.0 6.1E-31 2.1E-35  217.1   1.3  196    8-254    69-281 (287)
139 2pml_X PFPK7, Ser/Thr protein  100.0 2.7E-30 9.1E-35  218.8   4.6  214    6-255    89-328 (348)
140 2clq_A Mitogen-activated prote 100.0 1.9E-30 6.4E-35  214.7   3.6  197    8-255    67-284 (295)
141 3q60_A ROP5B; pseudokinase, tr 100.0 1.2E-30   4E-35  223.2   1.9  146   65-254   197-357 (371)
142 3a7i_A MST3 kinase, serine/thr 100.0 2.6E-30 8.8E-35  214.9   3.5  193    8-254    68-275 (303)
143 2j7t_A Serine/threonine-protei 100.0 6.6E-31 2.3E-35  218.2  -0.2  195    9-255    65-281 (302)
144 2wtk_C Serine/threonine-protei 100.0 1.2E-30   4E-35  217.0   1.3  194    7-255    53-269 (305)
145 3a99_A Proto-oncogene serine/t 100.0 8.4E-31 2.9E-35  219.8  -0.0  188    7-255    93-299 (320)
146 1x8b_A WEE1HU, WEE1-like prote 100.0 3.5E-30 1.2E-34  211.9   3.5  188    9-255    59-285 (289)
147 3an0_A Dual specificity mitoge 100.0 1.8E-30 6.1E-35  219.3   1.2  190   13-254   103-315 (340)
148 2iwi_A Serine/threonine-protei 100.0 5.3E-30 1.8E-34  213.8   4.0  189    6-255    80-289 (312)
149 2x7f_A TRAF2 and NCK-interacti 100.0 4.4E-30 1.5E-34  215.5   2.2  196    8-255    68-292 (326)
150 3qup_A Tyrosine-protein kinase 100.0 7.9E-30 2.7E-34  213.8   3.5  194    8-254    73-303 (323)
151 3p86_A Serine/threonine-protei 100.0 1.4E-29 4.8E-34  211.4   4.9  189    8-249    82-291 (309)
152 3lb7_A RAF proto-oncogene seri 100.0 1.4E-29 4.8E-34  211.2   4.7  194    8-251    80-295 (307)
153 2w5a_A Serine/threonine-protei 100.0 3.4E-30 1.1E-34  211.6   0.9  195    8-255    53-273 (279)
154 2dyl_A Dual specificity mitoge 100.0 4.8E-30 1.6E-34  214.4   1.4  194   10-254    74-288 (318)
155 3p23_A Serine/threonine-protei 100.0 5.6E-30 1.9E-34  223.1   1.5  198    7-255    64-289 (432)
156 2psq_A Fibroblast growth facto 100.0 1.5E-29   5E-34  216.4   4.0  190    7-250   133-358 (370)
157 3poz_A Epidermal growth factor 100.0 4.7E-30 1.6E-34  215.9   0.6  190    8-250    65-272 (327)
158 3kex_A Receptor tyrosine-prote 100.0 8.1E-30 2.8E-34  214.2   1.9  192    6-250    61-270 (325)
159 3ork_A Serine/threonine protei 100.0 8.4E-31 2.9E-35  218.8  -4.5  197    8-254    60-278 (311)
160 4hcu_A Tyrosine-protein kinase  99.9 1.1E-29 3.8E-34  207.6   1.4  190    7-250    52-260 (269)
161 3vhe_A Vascular endothelial gr  99.9 2.1E-29 7.1E-34  214.1   3.1  144   58-250   189-349 (359)
162 3kul_A Ephrin type-A receptor   99.9 1.8E-29 6.1E-34  212.2   2.3  189    7-249    97-306 (325)
163 3aln_A Dual specificity mitoge  99.9 6.6E-30 2.3E-34  214.7  -0.3  193   13-254    74-290 (327)
164 1mp8_A Focal adhesion kinase 1  99.9 9.5E-30 3.3E-34  209.3   0.1  188    8-250    64-270 (281)
165 3cbl_A C-FES, proto-oncogene t  99.9 1.4E-29 4.8E-34  217.0   1.1  191    5-249   157-367 (377)
166 3lzb_A Epidermal growth factor  99.9   2E-29   7E-34  212.0   1.9  189    8-249    65-271 (327)
167 3gen_A Tyrosine-protein kinase  99.9 4.2E-29 1.4E-33  205.5   3.7  189    8-250    67-274 (283)
168 2rio_A Serine/threonine-protei  99.9   3E-29   1E-33  218.8   2.8  198    8-254    56-300 (434)
169 2qkw_B Protein kinase; three-h  99.9 2.1E-28 7.3E-33  205.0   7.6  205    8-250    83-309 (321)
170 3sxs_A Cytoplasmic tyrosine-pr  99.9 2.2E-29 7.5E-34  205.6   1.2  189    8-250    51-258 (268)
171 3tt0_A Basic fibroblast growth  99.9 6.6E-29 2.3E-33  213.2   4.0  189    8-250   122-346 (382)
172 3cc6_A Protein tyrosine kinase  99.9 3.6E-29 1.2E-33  205.8   2.2  188    8-250    61-267 (281)
173 1zy4_A Serine/threonine-protei  99.9   3E-29   1E-33  207.8   1.1  197    7-255    49-289 (303)
174 3cek_A Dual specificity protei  99.9 5.4E-29 1.8E-33  207.9   2.4  195    8-255    74-298 (313)
175 4f0f_A Serine/threonine-protei  99.9 8.3E-29 2.8E-33  204.2   3.4  191    7-249    70-282 (287)
176 2jii_A Serine/threonine-protei  99.9 3.5E-28 1.2E-32  206.4   7.1  199    6-249    88-329 (352)
177 3dtc_A Mitogen-activated prote  99.9 7.2E-29 2.5E-33  202.8   2.7  190    8-250    54-267 (271)
178 2ivs_A Proto-oncogene tyrosine  99.9 4.6E-29 1.6E-33  208.1   1.4  189    8-250    74-305 (314)
179 3l9p_A Anaplastic lymphoma kin  99.9 1.8E-29 6.1E-34  215.6  -1.1  191    8-252   122-341 (367)
180 1qcf_A Haematopoetic cell kina  99.9 1.5E-28   5E-33  215.6   4.6  188    7-249   230-437 (454)
181 3s95_A LIMK-1, LIM domain kina  99.9   1E-28 3.4E-33  206.0   3.3  191    7-249    54-275 (310)
182 1rjb_A FL cytokine receptor; k  99.9 1.2E-28 4.2E-33  208.3   3.6  190    8-250    96-328 (344)
183 1k9a_A Carboxyl-terminal SRC k  99.9 8.6E-29 2.9E-33  216.8   2.5  188    7-249   233-438 (450)
184 3qa8_A MGC80376 protein; kinas  99.9 4.8E-29 1.6E-33  225.5   0.8  217    8-254    60-302 (676)
185 3fhr_A MAP kinase-activated pr  99.9 1.3E-29 4.5E-34  213.9  -2.8  198   12-255    74-293 (336)
186 1t46_A HOMO sapiens V-KIT hard  99.9 1.8E-28 6.3E-33  204.3   3.6  191    7-250    73-301 (313)
187 4eut_A Serine/threonine-protei  99.9 6.2E-29 2.1E-33  214.3   0.5  217    9-249    56-302 (396)
188 4hgt_A Casein kinase I isoform  99.9 2.7E-28 9.3E-33  201.6   4.2  198    7-249    51-273 (296)
189 1u59_A Tyrosine-protein kinase  99.9 8.3E-29 2.9E-33  204.3   1.0  189    8-251    58-267 (287)
190 2ozo_A Tyrosine-protein kinase  99.9 1.8E-28 6.2E-33  222.2   3.2  188    7-249   383-591 (613)
191 1luf_A Muscle-specific tyrosin  99.9 1.3E-28 4.3E-33  208.0   1.9  190    7-250    97-329 (343)
192 1fvr_A Tyrosine-protein kinase  99.9 8.6E-29 2.9E-33  208.0   0.9  189    8-250    73-294 (327)
193 3uzp_A CKI-delta, CKID, casein  99.9 4.3E-28 1.5E-32  200.5   4.9  198    7-249    51-273 (296)
194 4eqm_A Protein kinase; transfe  99.9 1.6E-28 5.4E-33  203.6   2.3  193    8-251    59-269 (294)
195 2izr_A Casein kinase I isoform  99.9 3.9E-28 1.3E-32  204.3   4.7  195    7-249    51-274 (330)
196 3og7_A AKAP9-BRAF fusion prote  99.9 1.6E-28 5.3E-33  202.9   2.2  193    7-249    67-281 (289)
197 3soc_A Activin receptor type-2  99.9 5.6E-29 1.9E-33  208.8  -0.6  210    9-249    67-311 (322)
198 1opk_A P150, C-ABL, proto-onco  99.9 2.1E-28 7.3E-33  216.7   2.9  189    7-249   263-471 (495)
199 2xir_A Vascular endothelial gr  99.9   2E-28 6.9E-33  204.3   2.5  191    8-250    78-304 (316)
200 1fmk_A C-SRC, P60-SRC, tyrosin  99.9 3.3E-28 1.1E-32  213.2   3.9  188    7-249   226-433 (452)
201 2v62_A Serine/threonine-protei  99.9 1.9E-28 6.5E-33  207.5   2.3  195   10-249    98-321 (345)
202 2qol_A Ephrin receptor; recept  99.9 2.5E-28 8.4E-33  209.0   2.8  189    7-249    93-302 (373)
203 3t9t_A Tyrosine-protein kinase  99.9 2.7E-28 9.1E-33  198.9   2.9  190    7-250    50-258 (267)
204 3pls_A Macrophage-stimulating   99.9 8.3E-28 2.8E-32  199.0   5.8  189    8-249    70-280 (298)
205 2pvf_A Fibroblast growth facto  99.9 4.4E-28 1.5E-32  204.3   3.7  189    8-250    88-312 (334)
206 3f66_A Hepatocyte growth facto  99.9 7.5E-28 2.6E-32  199.5   4.6  189    8-249    74-284 (298)
207 1csn_A Casein kinase-1; phosph  99.9 7.2E-28 2.5E-32  199.4   4.5  196    7-249    52-276 (298)
208 3brb_A Proto-oncogene tyrosine  99.9 7.1E-28 2.4E-32  201.0   4.3  190    8-250    84-302 (313)
209 1p4o_A Insulin-like growth fac  99.9 4.3E-28 1.5E-32  203.0   2.9  189    8-250    76-293 (322)
210 2eva_A TAK1 kinase - TAB1 chim  99.9 5.4E-28 1.9E-32  201.5   3.5  186    7-249    48-256 (307)
211 3kfa_A Tyrosine-protein kinase  99.9 5.4E-28 1.8E-32  199.3   3.3  188    8-249    57-264 (288)
212 3uim_A Brassinosteroid insensi  99.9 9.9E-28 3.4E-32  201.3   4.9  207    8-250    75-305 (326)
213 4fl3_A Tyrosine-protein kinase  99.9 2.9E-28   1E-32  221.5   1.4  188    7-249   417-624 (635)
214 2i1m_A Macrophage colony-stimu  99.9 4.4E-28 1.5E-32  204.0   2.4  191    7-250    96-320 (333)
215 1mqb_A Ephrin type-A receptor   99.9 4.2E-28 1.4E-32  204.5   1.9  189    8-250    94-303 (333)
216 3ugc_A Tyrosine-protein kinase  99.9 4.9E-28 1.7E-32  200.4   2.2  204    7-249    58-284 (295)
217 1qpc_A LCK kinase; alpha beta   99.9 1.1E-27 3.9E-32  196.6   4.2  187    8-249    56-262 (279)
218 2a19_B Interferon-induced, dou  99.9 5.5E-28 1.9E-32  198.6   2.2  189    6-252    50-270 (284)
219 1byg_A CSK, protein (C-termina  99.9 4.1E-28 1.4E-32  199.2   1.3  187    8-249    62-266 (278)
220 3op5_A Serine/threonine-protei  99.9 3.3E-28 1.1E-32  207.4   0.8  154   57-249   147-322 (364)
221 3c1x_A Hepatocyte growth facto  99.9 3.3E-28 1.1E-32  208.2   0.4  190    8-250   138-349 (373)
222 2nru_A Interleukin-1 receptor-  99.9 2.1E-27 7.2E-32  197.6   5.2  202    8-250    78-300 (307)
223 2h8h_A Proto-oncogene tyrosine  99.9 8.4E-28 2.9E-32  214.8   2.8  188    7-249   309-516 (535)
224 1u46_A ACK-1, activated CDC42   99.9 2.4E-28 8.2E-33  201.6  -0.7  189    8-250    69-278 (291)
225 2yfx_A Tyrosine-protein kinase  99.9 2.5E-28 8.5E-33  205.2  -1.2  193    8-253    81-301 (327)
226 2wqm_A Serine/threonine-protei  99.9 1.4E-27 4.7E-32  199.0   3.3  192    8-250    80-291 (310)
227 2j0j_A Focal adhesion kinase 1  99.9 1.1E-27 3.8E-32  218.5   2.9  187    8-249   439-644 (656)
228 4e5w_A Tyrosine-protein kinase  99.9 1.5E-27   5E-32  198.0   2.5  202    8-249    71-295 (302)
229 4fvq_A Tyrosine-protein kinase  99.9 5.4E-28 1.8E-32  199.4  -0.5  185    7-250    59-269 (289)
230 1xbb_A Tyrosine-protein kinase  99.9   1E-27 3.5E-32  198.2   0.9  188    7-249    65-272 (291)
231 3kmu_A ILK, integrin-linked ki  99.9 3.5E-27 1.2E-31  192.5   3.7  187    7-249    54-263 (271)
232 3lxp_A Non-receptor tyrosine-p  99.9 3.2E-27 1.1E-31  197.8   3.3  203    7-249    80-303 (318)
233 3q4u_A Activin receptor type-1  99.9   3E-27   1E-31  195.9   2.9  198   10-249    50-295 (301)
234 2vuw_A Serine/threonine-protei  99.9 2.7E-26 9.4E-31  193.4   8.4  190    7-254    70-336 (336)
235 3sv0_A Casein kinase I-like; t  99.9 9.6E-27 3.3E-31  205.1   4.7  198    7-249    49-271 (483)
236 3dzo_A Rhoptry kinase domain;   99.9 8.3E-27 2.9E-31  202.1   4.2  141   57-254   206-368 (413)
237 2h34_A Serine/threonine-protei  99.9 3.3E-27 1.1E-31  196.9   1.3  191    7-249    81-289 (309)
238 2y4i_B KSR2, HKSR2, kinase sup  99.9 7.8E-27 2.7E-31  195.0   3.2  191    5-249    74-295 (319)
239 3mdy_A Bone morphogenetic prot  99.9 1.4E-26 4.8E-31  194.8   3.8  199   10-250    79-325 (337)
240 3lxl_A Tyrosine-protein kinase  99.9 2.8E-27 9.5E-32  198.7  -0.7  201    7-250    71-297 (327)
241 3ll6_A Cyclin G-associated kin  99.9 2.8E-27 9.5E-32  198.9  -1.1  187    8-250    73-302 (337)
242 2w1i_A JAK2; chromosomal rearr  99.9 1.1E-26 3.7E-31  195.1   0.8  204    7-249    89-315 (326)
243 1b6c_B TGF-B superfamily recep  99.9 1.3E-26 4.4E-31  195.6   0.7  200    9-250    83-330 (342)
244 3m2w_A MAP kinase-activated pr  99.9 5.4E-27 1.9E-31  194.7  -3.0  181    9-255    59-262 (299)
245 3g2f_A Bone morphogenetic prot  99.9   3E-27   1E-31  199.0  -4.7  207   14-249    61-311 (336)
246 2buj_A Serine/threonine-protei  99.9   3E-26   1E-30  191.4   0.8  192    8-250    74-300 (317)
247 3gxj_A TGF-beta receptor type-  99.9 1.2E-27 4.3E-32  198.3  -9.5  199    9-249    44-290 (303)
248 3e7e_A HBUB1, BUB1A, mitotic c  99.9   2E-25 6.9E-30  190.2   3.5  138    9-151   113-287 (365)
249 2pzi_A Probable serine/threoni  99.9 1.3E-25 4.5E-30  206.0  -0.0  181    8-253   127-324 (681)
250 3uqc_A Probable conserved tran  99.8 8.4E-22 2.9E-26  162.5  -2.2  169    7-249    78-258 (286)
251 4azs_A Methyltransferase WBDD;  99.7 1.7E-20 5.9E-25  168.3 -12.2  132    7-147   288-436 (569)
252 3en9_A Glycoprotease, O-sialog  99.2 1.4E-13 4.9E-18  122.7  -5.6  130    7-149   386-538 (540)
253 1zar_A RIO2 kinase; serine kin  98.3 2.2E-08 7.6E-13   81.9  -2.9   90    8-123   152-253 (282)
254 1zth_A RIO1 serine protein kin  96.5 0.00082 2.8E-08   53.7   1.6   40   60-102   168-220 (258)
255 2yle_A Protein spire homolog 1  95.7   0.051 1.7E-06   42.1   8.0   74   57-144    44-131 (229)
256 4gyi_A RIO2 kinase; protein ki  89.1   0.088   3E-06   44.7   0.5   39   62-101   205-265 (397)
257 3sg8_A APH(2'')-ID; antibiotic  82.4    0.68 2.3E-05   37.3   2.5   70   79-150   201-288 (304)
258 1nd4_A Aminoglycoside 3'-phosp  34.4      12  0.0004   28.7   0.8   20   79-99    194-213 (264)
259 2x6h_A GH13170P, VPS34, phosph  32.8      29 0.00099   31.6   3.2   41   78-124   554-596 (696)
260 3ls8_A Phosphatidylinositol 3-  31.3      33  0.0011   30.7   3.2   41   78-124   480-522 (614)
261 2y3a_A Phosphatidylinositol-4,  23.0      49  0.0017   31.8   3.0   21   78-99    943-964 (1092)
262 2wxf_A Phosphatidylinositol-4,  22.3      43  0.0015   31.7   2.4   21   78-99    791-812 (940)
263 3oja_A Leucine-rich immune mol  21.3      31  0.0011   29.7   1.2   30    5-37    324-353 (487)

No 1  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=9e-44  Score=299.35  Aligned_cols=197  Identities=18%  Similarity=0.245  Sum_probs=159.3

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC-cccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH-KNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      +.+|+.+|+.+.|||||+   +++++...+.+ +.+|+++.+... ..+..+.+++.+++.|+.||+.|| |||      
T Consensus       118 ~~~Ei~il~~l~HpnIV~---l~~~~~~~~~~-~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiH  193 (346)
T 4fih_A          118 LFNEVVIMRDYQHENVVE---MYNSYLVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH  193 (346)
T ss_dssp             GHHHHHHHHHCCCTTBCC---EEEEEEETTEE-EEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHhCCCCCCCc---EEEEEEECCEE-EEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            456999999999999999   99999888775 777777766432 233457899999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.+|.+||+|||+|+.+... ...+..+| +.|||||++.+.+|+.++||||+||++|+|++|++||.+
T Consensus       194 RDlKp~NILl-~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~  272 (346)
T 4fih_A          194 RDIKSDSILL-THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN  272 (346)
T ss_dssp             CCCSGGGEEE-CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccCCHHHEEE-CCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence                 79999 58899999999999987653 34456677 999999999999999999999999999999999999986


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      ..+.+..+....  ++ ..                                      ..+...++++.+||.
T Consensus       273 ~~------~~~~~~~i~~~~--~~-~~--------------------------------------~~~~~~s~~~~dli~  305 (346)
T 4fih_A          273 EP------PLKAMKMIRDNL--PP-RL--------------------------------------KNLHKVSPSLKGFLD  305 (346)
T ss_dssp             SC------HHHHHHHHHHSS--CC-CC--------------------------------------SCGGGSCHHHHHHHH
T ss_pred             cC------HHHHHHHHHcCC--CC-CC--------------------------------------CccccCCHHHHHHHH
Confidence            54      334444333211  10 00                                      011346788999999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||+.||++|||++|+++||||++
T Consensus       306 ~~L~~dP~~R~ta~e~l~Hp~~~~  329 (346)
T 4fih_A          306 RLLVRDPAQRATAAELLKHPFLAK  329 (346)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             HHcCCChhHCcCHHHHhcCHhhcC
Confidence            999999999999999999999974


No 2  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=5.8e-43  Score=290.39  Aligned_cols=194  Identities=21%  Similarity=0.284  Sum_probs=157.9

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+++|+.+.|||||+   +++++++.+.+ +.+|++..+.....  ...+.+++..++.|+.||+.|| |||     
T Consensus        79 ~~~E~~il~~l~HpnIv~---l~~~~~~~~~~-yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~Ii  154 (311)
T 4aw0_A           79 VTRERDVMSRLDHPFFVK---LYFTFQDDEKL-YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII  154 (311)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEECSSEE-EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhCCCCCCCe---EEEEEEeCCEE-EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            456999999999999999   99999887775 77888877643332  2346899999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCC---cccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDE---TICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~---~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                            +|||+ +.++.+||+|||+|+.+...   ....+.+| +.|||||++.+..|+.++||||+||++|+|++|++|
T Consensus       155 HRDlKPeNILl-~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P  233 (311)
T 4aw0_A          155 HRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP  233 (311)
T ss_dssp             CSCCSGGGEEE-CTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCCCHHHeEE-cCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                  89999 58899999999999987542   23445677 999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+.+      ..+.+.+|...                                            .+.+|...++++++
T Consensus       234 F~~~~------~~~~~~~i~~~--------------------------------------------~~~~p~~~s~~~~d  263 (311)
T 4aw0_A          234 FRAGN------EGLIFAKIIKL--------------------------------------------EYDFPEKFFPKARD  263 (311)
T ss_dssp             SCCSS------HHHHHHHHHHT--------------------------------------------CCCCCTTCCHHHHH
T ss_pred             CCCCC------HHHHHHHHHcC--------------------------------------------CCCCCcccCHHHHH
Confidence            98654      33333333221                                            11133456788999


Q ss_pred             HHHhccccCCCCCCCHHH------HhcCcCCCC
Q psy323          229 FLIPMLRLNPNKRETAEQ------CLQNEWLIK  255 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e------~l~hp~~~~  255 (255)
                      ||.+||+.||++|+|++|      +++||||++
T Consensus       264 li~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~  296 (311)
T 4aw0_A          264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES  296 (311)
T ss_dssp             HHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred             HHHHHccCCHhHCcChHHHcCCHHHHCCCCcCC
Confidence            999999999999999988      589999974


No 3  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.4e-43  Score=288.64  Aligned_cols=193  Identities=19%  Similarity=0.317  Sum_probs=145.3

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCC-CCcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPH-QHKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      +.+|+++|+.+.||||++   +++++...+.+ +.+|++..+. .......+.+++.+++.+++|++.|| |||      
T Consensus        60 ~~~Ei~il~~l~HpnIv~---~~~~~~~~~~~-~ivmEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiH  135 (275)
T 3hyh_A           60 IEREISYLRLLRHPHIIK---LYDVIKSKDEI-IMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH  135 (275)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEEECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHCCCCCCCe---EEEEEEECCEE-EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            456999999999999999   99999887774 5666665332 22233457899999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCC-CCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEF-DMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~-~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.++.+||+|||+|+........+..+| +.|+|||++.+..| +.++||||+||++|+|++|++||.+
T Consensus       136 RDiKP~NILl-~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~  214 (275)
T 3hyh_A          136 RDLKPENLLL-DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD  214 (275)
T ss_dssp             CCCCTTTEEE-CTTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCChHHeEE-CCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence                 89999 5889999999999988776555666778 99999999999876 5899999999999999999999985


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      .......+..  +.                                          +..+...++++.+||.
T Consensus       215 ~~------~~~~~~~i~~--~~------------------------------------------~~~p~~~s~~~~~li~  244 (275)
T 3hyh_A          215 ES------IPVLFKNISN--GV------------------------------------------YTLPKFLSPGAAGLIK  244 (275)
T ss_dssp             SS------HHHHHHHHHH--TC------------------------------------------CCCCTTSCHHHHHHHH
T ss_pred             CC------HHHHHHHHHc--CC------------------------------------------CCCCCCCCHHHHHHHH
Confidence            43      2222222211  00                                          1133456788999999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      +||+.||++|||++|+++||||+
T Consensus       245 ~~L~~dP~~R~s~~eil~hpw~k  267 (275)
T 3hyh_A          245 RMLIVNPLNRISIHEIMQDDWFK  267 (275)
T ss_dssp             HHSCSSGGGSCCHHHHHHCHHHH
T ss_pred             HHccCChhHCcCHHHHHcCcccc
Confidence            99999999999999999999996


No 4  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=1.7e-42  Score=298.36  Aligned_cols=197  Identities=17%  Similarity=0.238  Sum_probs=158.5

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC-cccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH-KNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      +.+|+.+|+.+.|||||+   +++++...+.+ +.+|+++.+... ..+..+.+++.+++.|+.||+.|| |||      
T Consensus       195 ~~~Ei~il~~l~HpnIV~---l~~~~~~~~~~-~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiH  270 (423)
T 4fie_A          195 LFNEVVIMRDYQHENVVE---MYNSYLVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH  270 (423)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEEETTEE-EEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHhCCCCCCCc---eEEEEEECCEE-EEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            446999999999999999   99999887774 667777665432 233457799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.+|.+||+|||+|+.+... ...+..+| +.|||||++.+..|+.++||||+||++|+|++|++||.+
T Consensus       271 RDiKp~NILl-~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~  349 (423)
T 4fie_A          271 RDIKSDSILL-THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN  349 (423)
T ss_dssp             CCCSTTTEEE-CTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccCCHHHEEE-cCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence                 89999 58899999999999987653 33455677 999999999999999999999999999999999999986


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      ..+.+..+....  ++ .                                      ...+...++++.+||.
T Consensus       350 ~~------~~~~~~~i~~~~--~~-~--------------------------------------~~~~~~~s~~~~dli~  382 (423)
T 4fie_A          350 EP------PLKAMKMIRDNL--PP-R--------------------------------------LKNLHKVSPSLKGFLD  382 (423)
T ss_dssp             SC------HHHHHHHHHHSC--CC-C--------------------------------------CSCTTSSCHHHHHHHH
T ss_pred             cC------HHHHHHHHHcCC--CC-C--------------------------------------CcccccCCHHHHHHHH
Confidence            54      333443332211  10 0                                      0012346788999999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||+.||++|+|++|+|+||||++
T Consensus       383 ~~L~~dP~~R~ta~ell~Hp~~~~  406 (423)
T 4fie_A          383 RLLVRDPAQRATAAELLKHPFLAK  406 (423)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             HHcCCChhHCcCHHHHhcCHHhcC
Confidence            999999999999999999999974


No 5  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=3.5e-42  Score=284.04  Aligned_cols=197  Identities=12%  Similarity=0.251  Sum_probs=148.9

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhh---hhhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKK---KLLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~---~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      +.+|+++|+.+.|||||+   +++++...   ...++.+|+++........  ..+.+++..++.|+.|++.|| |||  
T Consensus        72 ~~~E~~il~~l~HpnIV~---~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~  148 (290)
T 3fpq_A           72 FKEEAEMLKGLQHPNIVR---FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR  148 (290)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHhCCCCCCCc---EEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            456999999999999999   88887642   2223566666655433322  346799999999999999999 998  


Q ss_pred             -----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCC
Q psy323           79 -----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 -----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~  146 (255)
                                 +|||+.+.+|.+||+|||+|+..... ..+..+| +.|||||++.+ +|+.++||||+||++|+|++|+
T Consensus       149 ~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~  226 (290)
T 3fpq_A          149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE  226 (290)
T ss_dssp             SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC-ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCC
Confidence                       68899545789999999999865442 3445677 99999999865 6999999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      +||.+..      +...+...+.. +..|..                                        .+...++++
T Consensus       227 ~Pf~~~~------~~~~~~~~i~~-~~~~~~----------------------------------------~~~~~~~~~  259 (290)
T 3fpq_A          227 YPYSECQ------NAAQIYRRVTS-GVKPAS----------------------------------------FDKVAIPEV  259 (290)
T ss_dssp             CTTTTCS------SHHHHHHHHTT-TCCCGG----------------------------------------GGGCCCHHH
T ss_pred             CCCCCCC------cHHHHHHHHHc-CCCCCC----------------------------------------CCccCCHHH
Confidence            9997543      23333221110 111111                                        112345788


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+||.+||+.||++|||++|+++||||++
T Consensus       260 ~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          260 KEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            99999999999999999999999999985


No 6  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=2.6e-42  Score=286.22  Aligned_cols=195  Identities=16%  Similarity=0.233  Sum_probs=152.3

Q ss_pred             CCCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            6 PVNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         6 ~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+.+|+.+|+.+.|||||+   +++++...+.+ +.+|++..+.....  ...+.+++.+++.|+.|++.|| |||    
T Consensus        72 ~~~~E~~il~~l~HpnIv~---l~~~~~~~~~~-~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~I  147 (304)
T 3ubd_A           72 RTKMERDILVEVNHPFIVK---LHYAFQTEGKL-YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI  147 (304)
T ss_dssp             ------CCCCCCCCTTEEC---EEEEEEETTEE-EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHCCCCCCCe---EEEEEEECCEE-EEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            3567999999999999999   99999887774 77777776544332  2346899999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                             +|||+ +.+|.+||+|||+|+..... ...+..+| +.|||||++.+..|+.++||||+||++|+|++|++||
T Consensus       148 iHRDlKp~NILl-~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF  226 (304)
T 3ubd_A          148 IYRDLKPENILL-DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF  226 (304)
T ss_dssp             CCSSCCGGGEEE-CTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cCCCCCHHHeEE-cCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCC
Confidence                   79999 58899999999999876542 33455677 9999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+.+      ..+.+..+.+.  .                                          ...|...++++.+|
T Consensus       227 ~~~~------~~~~~~~i~~~--~------------------------------------------~~~p~~~s~~~~~l  256 (304)
T 3ubd_A          227 QGKD------RKETMTMILKA--K------------------------------------------LGMPQFLSPEAQSL  256 (304)
T ss_dssp             CCSS------HHHHHHHHHHC--C------------------------------------------CCCCTTSCHHHHHH
T ss_pred             CCcC------HHHHHHHHHcC--C------------------------------------------CCCCCcCCHHHHHH
Confidence            8654      33333333321  1                                          11334567889999


Q ss_pred             HHhccccCCCCCCC-----HHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRET-----AEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t-----~~e~l~hp~~~~  255 (255)
                      |.+||+.||++|||     ++|+++||||++
T Consensus       257 i~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~  287 (304)
T 3ubd_A          257 LRMLFKRNPANRLGAGPDGVEEIKRHSFFST  287 (304)
T ss_dssp             HHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence            99999999999998     489999999974


No 7  
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=5.5e-42  Score=294.96  Aligned_cols=225  Identities=21%  Similarity=0.355  Sum_probs=165.1

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhh-----hhhhhhcCCCCCCC-CcccccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKK-----LLLKEILPIQPPHQ-HKNLTRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~-----~~~~~~~~~~~~l~-~~~~~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      .+|+++|+.+.|||||+   +++++....     ..++.+|+++.+.. ......+.+++..++.|++||+.|| |||  
T Consensus       101 ~~Ei~il~~l~HpnIv~---l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~  177 (398)
T 4b99_A          101 LRELKILKHFKHDNIIA---IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA  177 (398)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCcce---EeeeeecccccccCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            35999999999999999   888765431     12345555544322 2223356899999999999999999 998  


Q ss_pred             ---------CCceeeCCCCcEEEeecCccccCCCC-----cccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHH
Q psy323           79 ---------EELLYPTQNIEIVITDLEYVRPENDE-----TICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFEL  142 (255)
Q Consensus        79 ---------~niLl~~~~~~~kl~DfG~a~~~~~~-----~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l  142 (255)
                               +|||+ +.+|.+||+|||+|+.+...     ...+..+| +.|+|||++.+. .|+.++||||+||++|+|
T Consensus       178 ~iiHRDlKP~NIl~-~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~el  256 (398)
T 4b99_A          178 QVIHRDLKPSNLLV-NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM  256 (398)
T ss_dssp             TCBCCCCCGGGEEE-CTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred             cCcCCCcCcccccc-CCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHH
Confidence                     79999 58899999999999876432     23445677 999999999987 569999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhh
Q psy323          143 VTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKED  222 (255)
Q Consensus       143 ~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (255)
                      ++|++||.|.+      ..+++..|....|.|+...+...... .+..+..    ..+...+ .++...       ....
T Consensus       257 l~G~~pF~g~~------~~~~l~~I~~~~g~p~~~~~~~~~~~-~~~~~~~----~~~~~~~-~~~~~~-------~~~~  317 (398)
T 4b99_A          257 LARRQLFPGKN------YVHQLQLIMMVLGTPSPAVIQAVGAE-RVRAYIQ----SLPPRQP-VPWETV-------YPGA  317 (398)
T ss_dssp             HHTSCSSCCSS------HHHHHHHHHHHHCCCCGGGTC------CHHHHHH----SSCCCCC-CCHHHH-------STTC
T ss_pred             HHCCCCCCCCC------HHHHHHHHHHhcCCCChHHhhhhhhh-hhhhhhh----cCCCcCC-CCHHHh-------CCCC
Confidence            99999999776      78899999999999987765332211 0000110    0000111 111111       1235


Q ss_pred             HHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          223 AKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       223 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.++.|||.+||++||++|+|++|+|+||||++
T Consensus       318 s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  350 (398)
T 4b99_A          318 DRQALSLLGRMLRFEPSARISAAAALRHPFLAK  350 (398)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTT
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCc
Confidence            688999999999999999999999999999974


No 8  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1.3e-42  Score=292.65  Aligned_cols=195  Identities=19%  Similarity=0.287  Sum_probs=156.8

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc----ccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL----TRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +.+|+++|+.+.|||||+   +++++.+.+.+ +.+|+++.+......    ....+++.+++.|+.||+.|| |||   
T Consensus        70 ~~~E~~il~~l~HpnIV~---~~~~~~~~~~~-yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~  145 (350)
T 4b9d_A           70 SRREVAVLANMKHPNIVQ---YRESFEENGSL-YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK  145 (350)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEEETTEE-EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCCCCCc---EEEEEEECCEE-EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456999999999999999   99999887764 677777665443322    234589999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCcc-cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETI-CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~-~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                              +|||+ +.+|.+||+|||+|+....... .+..+| +.|||||++.+..|+.++||||+||++|+|++|++|
T Consensus       146 IiHRDlKp~NILl-~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~P  224 (350)
T 4b9d_A          146 ILHRDIKSQNIFL-TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA  224 (350)
T ss_dssp             CEETTCCGGGEEE-CTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             eeeccCCHHHEEE-CCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                    79999 5889999999999998765322 334567 999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+.+      ..+.+.++...  ..+                                         ..+...+.++.+
T Consensus       225 F~~~~------~~~~~~~i~~~--~~~-----------------------------------------~~~~~~s~~~~~  255 (350)
T 4b9d_A          225 FEAGS------MKNLVLKIISG--SFP-----------------------------------------PVSLHYSYDLRS  255 (350)
T ss_dssp             CCCSS------HHHHHHHHHHT--CCC-----------------------------------------CCCTTSCHHHHH
T ss_pred             CCCcC------HHHHHHHHHcC--CCC-----------------------------------------CCCccCCHHHHH
Confidence            98654      33333433321  110                                         022345688999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ||.+||+.||++|||++|+++||||++
T Consensus       256 li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          256 LVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             HHHHHccCChhHCcCHHHHhcCHHhhc
Confidence            999999999999999999999999863


No 9  
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.1e-40  Score=283.77  Aligned_cols=237  Identities=16%  Similarity=0.228  Sum_probs=161.2

Q ss_pred             CchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            8 NPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         8 ~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      .+|+++|+.+ .||||++   +.+++...+.+ +.++++.......... +.+++.+++.|++|++.|| |||       
T Consensus        67 ~~E~~~l~~~~~h~nIv~---l~~~~~~~~~~-~lvmE~~~g~~L~~~~-~~l~~~~~~~~~~qll~al~ylH~~gIiHR  141 (361)
T 4f9c_A           67 AAELQCLTVAGGQDNVMG---VKYCFRKNDHV-VIAMPYLEHESFLDIL-NSLSFQEVREYMLNLFKALKRIHQFGIVHR  141 (361)
T ss_dssp             HHHHHHHHHTCSBTTBCC---CSEEEEETTEE-EEEEECCCCCCHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHHHHHHhcCCCCCce---EEEEEEECCEE-EEEEeCCCcccHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence            3589999988 6999999   99998887774 5666665543333333 4599999999999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCC-----------------------------cccccccc-ccccchhhhhcC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDE-----------------------------TICREDIH-RQYKAVELIYTK  124 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~-----------------------------~~~~~~~~-~~y~aPE~l~~~  124 (255)
                          +|||+....+.+||+|||+|+.....                             ...+..+| +.|+|||++.+.
T Consensus       142 DiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~  221 (361)
T 4f9c_A          142 DVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC  221 (361)
T ss_dssp             CCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC
T ss_pred             cCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC
Confidence                89999655589999999999865431                             12234567 999999999887


Q ss_pred             -CCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhcccccccccccc------
Q psy323          125 -EFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQH------  197 (255)
Q Consensus       125 -~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  197 (255)
                       .|+.++||||+||++|+|++|+.||.+..     .+.+++..|..++|.++...+...... ...........      
T Consensus       222 ~~y~~~~DiWSlG~il~ell~G~~Pf~~~~-----~~~~~l~~I~~~~G~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~  295 (361)
T 4f9c_A          222 PNQTTAIDMWSAGVIFLSLLSGRYPFYKAS-----DDLTALAQIMTIRGSRETIQAAKTFGK-SILCSKEVPAQDLRKLC  295 (361)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHTCSSSSCCS-----SHHHHHHHHHHHHCHHHHHHHHHHTTE-EEEESSCCCCCCHHHHH
T ss_pred             CCCCCccchhhhHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHHhcCCccchhhhhhccc-cccccccCcchhhhHHH
Confidence             68999999999999999999999996433     267899999999987544332211110 00000000000      


Q ss_pred             -ccccCCCCcc----HHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          198 -NITSMNAKDN----FYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       198 -~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                       .+.......+    ...............+.+++|||++||++||++|+|++|+|+||||++
T Consensus       296 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          296 ERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             HHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence             0000000000    000000001112345788999999999999999999999999999985


No 10 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=3.6e-40  Score=276.64  Aligned_cols=197  Identities=17%  Similarity=0.245  Sum_probs=151.8

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      ..+|+.+|+.+.|||||+   +++++.+.+.+ +.+|++..+......  ..+.+++.+++.|+.|++.|| |||     
T Consensus        97 ~~~E~~il~~l~HpnIV~---l~~~~~~~~~~-~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~Ii  172 (336)
T 4g3f_A           97 RVEELVACAGLSSPRIVP---LYGAVREGPWV-NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL  172 (336)
T ss_dssp             CTHHHHTTTTCCCTTBCC---EEEEEEETTEE-EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHHHhCCCCCCCc---EEEEEEECCEE-EEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            356999999999999999   99998877764 677777766443332  346799999999999999999 998     


Q ss_pred             ------CCceeeCCCC-cEEEeecCccccCCCCcc------cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh
Q psy323           79 ------EELLYPTQNI-EIVITDLEYVRPENDETI------CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT  144 (255)
Q Consensus        79 ------~niLl~~~~~-~~kl~DfG~a~~~~~~~~------~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~  144 (255)
                            +|||+. .+| ++||+|||+|+.+.....      ....+| +.|||||++.+..|+.++||||+||++|+|++
T Consensus       173 HRDlKp~NILl~-~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt  251 (336)
T 4g3f_A          173 HGDVKADNVLLS-SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN  251 (336)
T ss_dssp             CSCCCGGGEEEC-TTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             ecccCHHHEEEe-CCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH
Confidence                  799994 665 799999999998754211      122357 99999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHH
Q psy323          145 GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAK  224 (255)
Q Consensus       145 g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      |++||.+.+..      ..+..+..   .++..                      .                .++..+++
T Consensus       252 G~~Pf~~~~~~------~~~~~i~~---~~~~~----------------------~----------------~~~~~~s~  284 (336)
T 4g3f_A          252 GCHPWTQYFRG------PLCLKIAS---EPPPI----------------------R----------------EIPPSCAP  284 (336)
T ss_dssp             SSCSSTTTCCS------CCHHHHHH---SCCGG----------------------G----------------GSCTTSCH
T ss_pred             CcCCCCCCCHH------HHHHHHHc---CCCCc----------------------h----------------hcCccCCH
Confidence            99999865422      22222221   11100                      0                12345678


Q ss_pred             HHHHHHHhccccCCCCCCCHHHH-------------hcCcCCCC
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQC-------------LQNEWLIK  255 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~-------------l~hp~~~~  255 (255)
                      ++.+||.+||+.||++|||+.|+             ++|||+++
T Consensus       285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~  328 (336)
T 4g3f_A          285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE  328 (336)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCC
Confidence            99999999999999999999997             67999864


No 11 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=2.5e-39  Score=290.58  Aligned_cols=199  Identities=16%  Similarity=0.270  Sum_probs=160.2

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc-c--ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN-L--TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-~--~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+|+.+.||||++   +++++...+.+ +.+|+++.+..... +  ..+.+++.+++.|++||+.|| |||    
T Consensus       201 ~~~Ei~il~~l~hpnIv~---l~~~~~~~~~~-~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~i  276 (573)
T 3uto_A          201 VRKEIQTMSVLRHPTLVN---LHDAFEDDNEM-VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY  276 (573)
T ss_dssp             HHHHHHHHHHTCCTTBCC---EEEEEECSSEE-EEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHhCCCCCCCe---EEEEEEECCEE-EEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            346999999999999999   99999887774 66666665543222 1  235799999999999999999 998    


Q ss_pred             -------CCceeeCC-CCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 -------EELLYPTQ-NIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 -------~niLl~~~-~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                             +|||+... .+.+||+|||+|+.+......+..+| +.|+|||++.+.+|+.++||||+||++|+|++|.+||
T Consensus       277 iHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf  356 (573)
T 3uto_A          277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF  356 (573)
T ss_dssp             ECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred             eeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence                   79999543 48999999999999887666667788 9999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+.+      ..+.+..+...-..++...                                        ....+.++++|
T Consensus       357 ~~~~------~~~~~~~i~~~~~~~~~~~----------------------------------------~~~~s~~~~dl  390 (573)
T 3uto_A          357 GGEN------DDETLRNVKSCDWNMDDSA----------------------------------------FSGISEDGKDF  390 (573)
T ss_dssp             CCSS------HHHHHHHHHTTCCCCCSGG----------------------------------------GTTSCHHHHHH
T ss_pred             CCcC------HHHHHHHHHhCCCCCCccc----------------------------------------ccCCCHHHHHH
Confidence            8664      4445544433222221111                                        12456889999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      |.+||+.||++|||++|+|+||||++
T Consensus       391 i~~~L~~dp~~R~t~~e~l~Hpw~~~  416 (573)
T 3uto_A          391 IRKLLLADPNTRMTIHQALEHPWLTP  416 (573)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             HHHHccCChhHCcCHHHHhcCcCcCC
Confidence            99999999999999999999999974


No 12 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=8e-38  Score=259.68  Aligned_cols=194  Identities=16%  Similarity=0.215  Sum_probs=136.7

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhh-----------hhhhhcCCCCCCCCcccc-----cCCCCHHHHHHHHHH
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKL-----------LLKEILPIQPPHQHKNLT-----RSSFSLTTFSKYVKQ   70 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-----------~~~~~~~~~~~l~~~~~~-----~~~l~~~~~~~~~~q   70 (255)
                      +.+|+++|+.+.|||||+   +++++...+.           .++.+|+++.........     ....++..++.|+.|
T Consensus        50 ~~~E~~il~~l~HpnIV~---~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~q  126 (299)
T 4g31_A           50 VMREVKALAKLEHPGIVR---YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ  126 (299)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCe---EEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHH
Confidence            456999999999999999   8887765432           235666666554332222     123566779999999


Q ss_pred             HHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCc-------------ccccccc-ccccchhhhhcC
Q psy323           71 ISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDET-------------ICREDIH-RQYKAVELIYTK  124 (255)
Q Consensus        71 ll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~-------------~~~~~~~-~~y~aPE~l~~~  124 (255)
                      ++.|| |||           +|||+ +.++.+||+|||+|+......             ..+..+| +.|||||++.+.
T Consensus       127 i~~al~ylH~~~IiHRDlKp~NILl-~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~  205 (299)
T 4g31_A          127 IAEAVEFLHSKGLMHRDLKPSNIFF-TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN  205 (299)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEE-CTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTC
T ss_pred             HHHHHHHHHHCcCccccCcHHHeEE-CCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCC
Confidence            99999 998           79999 588999999999998875421             1233467 999999999999


Q ss_pred             CCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCC
Q psy323          125 EFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNA  204 (255)
Q Consensus       125 ~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (255)
                      .|+.++||||+||++|||++   ||.+        ..+....+........+..+                         
T Consensus       206 ~y~~~~DiwSlGvilyell~---Pf~~--------~~~~~~~~~~~~~~~~p~~~-------------------------  249 (299)
T 4g31_A          206 SYSHKVDIFSLGLILFELLY---PFST--------QMERVRTLTDVRNLKFPPLF-------------------------  249 (299)
T ss_dssp             CCCTHHHHHHHHHHHHHHHS---CCSS--------HHHHHHHHHHHHTTCCCHHH-------------------------
T ss_pred             CCCCHHHHHHHHHHHHHHcc---CCCC--------ccHHHHHHHHHhcCCCCCCC-------------------------
Confidence            99999999999999999996   6752        22333333332221110000                         


Q ss_pred             CccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          205 KDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                                     ...++.+.+||.+||+.||++|||+.|+++||||++
T Consensus       250 ---------------~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~  285 (299)
T 4g31_A          250 ---------------TQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED  285 (299)
T ss_dssp             ---------------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred             ---------------cccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence                           123456779999999999999999999999999974


No 13 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=8.4e-38  Score=259.69  Aligned_cols=197  Identities=16%  Similarity=0.246  Sum_probs=142.6

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+|+.++|||||+   +++++.....  +.+++++........   ..+.+++.++..|+.|++.|| |||    
T Consensus        79 f~~E~~il~~l~HpNIV~---l~g~~~~~~~--~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~I  153 (307)
T 3omv_A           79 FRNEVAVLRKTRHVNILL---FMGYMTKDNL--AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNI  153 (307)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEECSSSC--EEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCCCEee---EEEEEECCeE--EEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            456999999999999999   8887654432  455555555433222   235799999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCC---cccccccc-ccccchhhhhcC---CCCCchhHHHHHHHHHHHhh
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDE---TICREDIH-RQYKAVELIYTK---EFDMKIDIWSTACLTFELVT  144 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~---~~~~~~~~-~~y~aPE~l~~~---~~~~~~DiwSlG~il~~l~~  144 (255)
                             +|||+ +.++.+||+|||+|+.....   ...+..+| +.|||||++.+.   .|+.++||||+||++|||+|
T Consensus       154 iHRDlKp~NILl-~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ellt  232 (307)
T 3omv_A          154 IHRDMKSNNIFL-HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT  232 (307)
T ss_dssp             BCSCCCSSSEEE-ETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cCCccCHHHEEE-CCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHH
Confidence                   79999 58899999999999876542   22344567 999999999754   58999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHH
Q psy323          145 GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAK  224 (255)
Q Consensus       145 g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      |+.||.+.+      ....+..+...-..+|.                         ..             ..+..++.
T Consensus       233 g~~Pf~~~~------~~~~~~~~~~~~~~~p~-------------------------~~-------------~~~~~~~~  268 (307)
T 3omv_A          233 GELPYSHIN------NRDQIIFMVGRGYASPD-------------------------LS-------------KLYKNCPK  268 (307)
T ss_dssp             SSCTTTTCC------CHHHHHHHHHTTCCCCC-------------------------ST-------------TSCTTSCH
T ss_pred             CCCCCCCCC------hHHHHHHHHhcCCCCCC-------------------------cc-------------cccccchH
Confidence            999998654      33333333221111110                         00             02245678


Q ss_pred             HHHHHHHhccccCCCCCCCHHHH------hcCcCC
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQC------LQNEWL  253 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~------l~hp~~  253 (255)
                      ++.+|+.+||+.||++|||+.++      ++|++-
T Consensus       269 ~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          269 AMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             HHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            89999999999999999999876      566654


No 14 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=2.2e-37  Score=278.43  Aligned_cols=193  Identities=18%  Similarity=0.263  Sum_probs=152.5

Q ss_pred             hhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC--------
Q psy323           10 DVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN--------   78 (255)
Q Consensus        10 e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH--------   78 (255)
                      +..+++.+.|||||+   ++.++...+.+ +.+|++..+.....  ...+.+++..++.|++||+.|| |||        
T Consensus       242 ~l~ll~~~~HP~IV~---l~~~f~~~~~l-ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRD  317 (689)
T 3v5w_A          242 MLSLVSTGDCPFIVC---MSYAFHTPDKL-SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRD  317 (689)
T ss_dssp             HHHHHSSSCCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             HHHHHhhCCCCCEeE---EEEEEEECCEE-EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            356777789999999   99999888775 77888877654332  2346899999999999999999 998        


Q ss_pred             ---CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhc-CCCCCchhHHHHHHHHHHHhhCCCCCCCCC
Q psy323           79 ---EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYMFNPFE  153 (255)
Q Consensus        79 ---~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~  153 (255)
                         +|||+ +.+|++||+|||+|+.+... .....+| +.|||||++.+ ..|+.++|+||+||++|+|++|++||.+.+
T Consensus       318 LKPeNILl-d~~G~vKL~DFGlA~~~~~~-~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~  395 (689)
T 3v5w_A          318 LKPANILL-DEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK  395 (689)
T ss_dssp             CSGGGEEE-CTTSCEEECCCTTCEECSSC-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGG
T ss_pred             CchHHeEE-eCCCCEEecccceeeecCCC-CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence               79999 68999999999999987664 2345577 99999999975 489999999999999999999999998543


Q ss_pred             CCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhc
Q psy323          154 SKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPM  233 (255)
Q Consensus       154 ~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  233 (255)
                      ..    +...+..  ....                                         .....|...++++++||.+|
T Consensus       396 ~~----~~~~i~~--~i~~-----------------------------------------~~~~~p~~~S~~a~dLI~~l  428 (689)
T 3v5w_A          396 TK----DKHEIDR--MTLT-----------------------------------------MAVELPDSFSPELRSLLEGL  428 (689)
T ss_dssp             CC----CHHHHHH--HHHH-----------------------------------------CCCCCCTTSCHHHHHHHHHH
T ss_pred             hH----HHHHHHH--hhcC-----------------------------------------CCCCCCccCCHHHHHHHHHH
Confidence            22    1111111  1111                                         11123456778999999999


Q ss_pred             cccCCCCCCC-----HHHHhcCcCCCC
Q psy323          234 LRLNPNKRET-----AEQCLQNEWLIK  255 (255)
Q Consensus       234 L~~dP~~R~t-----~~e~l~hp~~~~  255 (255)
                      |+.||.+|++     ++|+++||||++
T Consensus       429 L~~dP~~Rl~~~~~ga~ei~~HpfF~~  455 (689)
T 3v5w_A          429 LQRDVNRRLGCLGRGAQEVKESPFFRS  455 (689)
T ss_dssp             TCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred             ccCCHhHCCCCCCCCHHHHhcCccccC
Confidence            9999999998     799999999974


No 15 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.2e-37  Score=258.50  Aligned_cols=188  Identities=15%  Similarity=0.275  Sum_probs=145.6

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---------------ccCCCCHHHHHHHHHHH
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---------------TRSSFSLTTFSKYVKQI   71 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~l~~~~~~~~~~ql   71 (255)
                      +.+|+++|+.++|||||+   +++++.+.+.+ +.+++++........               ....+++.++..++.|+
T Consensus        62 f~~E~~il~~l~HpnIV~---l~g~~~~~~~~-~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi  137 (299)
T 4asz_A           62 FHREAELLTNLQHEHIVK---FYGVCVEGDPL-IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI  137 (299)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEECSSSSE-EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcc---EEEEEeeCCEE-EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHH
Confidence            457999999999999999   99998877663 555666555432222               12469999999999999


Q ss_pred             HHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCcccc---cccc-ccccchhhhhcCCCCCchhHHHH
Q psy323           72 SQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETICR---EDIH-RQYKAVELIYTKEFDMKIDIWST  135 (255)
Q Consensus        72 l~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~---~~~~-~~y~aPE~l~~~~~~~~~DiwSl  135 (255)
                      +.|| |||           +|||+ +.++.+||+|||+|+.........   ...+ +.|||||++.+..|+.++||||+
T Consensus       138 a~gl~yLH~~~iiHRDlKp~NILl-~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~  216 (299)
T 4asz_A          138 AAGMVYLASQHFVHRDLATRNCLV-GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL  216 (299)
T ss_dssp             HHHHHHHHHTTCCCSCCSGGGEEE-CGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHHHHHhCCcccCccCHhhEEE-CCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHH
Confidence            9999 998           79999 588999999999998765532221   2234 88999999999999999999999


Q ss_pred             HHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHH
Q psy323          136 ACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAK  214 (255)
Q Consensus       136 G~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
                      ||++|||+| |+.||.+.+      ..+.+..+.+  |..                                        
T Consensus       217 Gvvl~Ellt~G~~Pf~~~~------~~~~~~~i~~--~~~----------------------------------------  248 (299)
T 4asz_A          217 GVVLWEIFTYGKQPWYQLS------NNEVIECITQ--GRV----------------------------------------  248 (299)
T ss_dssp             HHHHHHHHTTTCCTTTTSC------HHHHHHHHHH--TCC----------------------------------------
T ss_pred             HHHHHHHHcCCCCCCCCCC------HHHHHHHHHc--CCC----------------------------------------
Confidence            999999998 899998653      2233333322  110                                        


Q ss_pred             hcCCChhhHHHHHHHHHhccccCCCCCCCHHHHh
Q psy323          215 SYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCL  248 (255)
Q Consensus       215 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  248 (255)
                       ...|..++.++.+|+.+||+.||++|||++++.
T Consensus       249 -~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~  281 (299)
T 4asz_A          249 -LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIH  281 (299)
T ss_dssp             -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -CCCCccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence             013345678899999999999999999999985


No 16 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=1.5e-36  Score=266.93  Aligned_cols=229  Identities=18%  Similarity=0.277  Sum_probs=162.7

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhh-----hhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKL-----LLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+.+|+.+.|+||++   +++++...+.     -++.++++....... .....+++..++.++.|++.|| |||   
T Consensus       109 ~~E~~~l~~l~hpnIv~---l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~-~~~~~l~~~~~~~~~~qil~aL~~lH~~~  184 (464)
T 3ttj_A          109 YRELVLMKCVNHKNIIS---LLNVFTPQKTLEEFQDVYLVMELMDANLCQ-VIQMELDHERMSYLLYQMLCGIKHLHSAG  184 (464)
T ss_dssp             HHHHHHHHHCCCTTBCC---CSEEECSCCSTTTCCEEEEEEECCSEEHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCCCCCc---EEEEEccCCccccCCeEEEEEeCCCCCHHH-HHhhcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            36899999999999999   8888865432     124444444332222 2234599999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                              +|||+ +.++.+||+|||+|+........+..++ +.|+|||++.+..|+.++||||+||++++|++|++||
T Consensus       185 iiHrDlkp~NIll-~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF  263 (464)
T 3ttj_A          185 IIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF  263 (464)
T ss_dssp             CCCCCCCGGGEEE-CTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccCCCChHhEEE-eCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCC
Confidence                    79999 5889999999999998776545566677 9999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcC-----CChhhHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYK-----IPKEDAK  224 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  224 (255)
                      .+.+      ..+++..+++.+|.|+.+.+......  +..+......    ... ......+.....     .....+.
T Consensus       264 ~g~~------~~~~~~~i~~~lg~p~~~~~~~~~~~--~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~s~  330 (464)
T 3ttj_A          264 PGRD------YIDQWNKVIEQLGTPCPEFMKKLQPT--VRNYVENRPK----YAG-LTFPKLFPDSLFPADSEHNKLKAS  330 (464)
T ss_dssp             CCSS------HHHHHHHHHHHHCSCCHHHHTTSCHH--HHHHHTTSCC----CCC-CCHHHHSCGGGSCCSSHHHHHHHH
T ss_pred             CCCC------HHHHHHHHHHhcCCCCHHHHHHcchh--hhhHhhcccc----cCC-CChHHhCcccccccccccccccCH
Confidence            9765      77899999999999988876443211  1222221100    000 111111111000     0012367


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      ++.+||.+||++||++|||++|+|+||||+
T Consensus       331 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~  360 (464)
T 3ttj_A          331 QARDLLSKMLVIDPAKRISVDDALQHPYIN  360 (464)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhcChhhh
Confidence            899999999999999999999999999996


No 17 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=3.3e-37  Score=259.06  Aligned_cols=190  Identities=14%  Similarity=0.212  Sum_probs=139.6

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc-----------------cccCCCCHHHHHHHHH
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN-----------------LTRSSFSLTTFSKYVK   69 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~~~~~l~~~~~~~~~~   69 (255)
                      +.+|+++|+.++|||||+   +++++.+.+.+ +.+++++.......                 ...+.+++.++..|+.
T Consensus        90 f~~E~~il~~l~HpnIV~---l~g~~~~~~~~-~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  165 (329)
T 4aoj_A           90 FQREAELLTMLQHQHIVR---FFGVCTEGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS  165 (329)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEECSSSSE-EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCc---EEEEEEECCEE-EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHH
Confidence            457999999999999999   99998877663 45555544432211                 2235799999999999


Q ss_pred             HHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCcc---cccccc-ccccchhhhhcCCCCCchhHH
Q psy323           70 QISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETI---CREDIH-RQYKAVELIYTKEFDMKIDIW  133 (255)
Q Consensus        70 qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~---~~~~~~-~~y~aPE~l~~~~~~~~~Diw  133 (255)
                      |++.|| |||           +|||+ +.++.+||+|||+|+.......   .+..++ +.|||||++.+..|+.++|||
T Consensus       166 qia~gl~yLH~~~iiHRDLKp~NILl-~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvw  244 (329)
T 4aoj_A          166 QVAAGMVYLAGLHFVHRDLATRNCLV-GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVW  244 (329)
T ss_dssp             HHHHHHHHHHHTTCCCSCCCGGGEEE-ETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHH
T ss_pred             HHHHHHHHHhcCCeecccccHhhEEE-CCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCcccccc
Confidence            999999 998           79999 5889999999999987654322   223445 899999999999999999999


Q ss_pred             HHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHH
Q psy323          134 STACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRIL  212 (255)
Q Consensus       134 SlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (255)
                      |+||++|||+| |+.||.+.+      ..+.+..+.+.  ..                                      
T Consensus       245 S~Gvvl~Ellt~G~~Pf~~~~------~~~~~~~i~~g--~~--------------------------------------  278 (329)
T 4aoj_A          245 SFGVVLWEIFTYGKQPWYQLS------NTEAIDCITQG--RE--------------------------------------  278 (329)
T ss_dssp             HHHHHHHHHHTTSCCTTCSSC------HHHHHHHHHHT--CC--------------------------------------
T ss_pred             chHHHHHHHHcCCCCCCCCCC------HHHHHHHHHcC--CC--------------------------------------
Confidence            99999999998 899998653      33333333221  10                                      


Q ss_pred             HHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          213 AKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       213 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                         ...|..+++++.+|+.+||+.||++|||++|++++
T Consensus       279 ---~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          279 ---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             ---CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             ---CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence               01334567889999999999999999999998764


No 18 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=2.9e-37  Score=257.11  Aligned_cols=190  Identities=16%  Similarity=0.265  Sum_probs=145.6

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc------------------cccCCCCHHHHHHHH
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN------------------LTRSSFSLTTFSKYV   68 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~------------------~~~~~l~~~~~~~~~   68 (255)
                      +.+|+.+|+.++|||||+   +++++...+.+ +.+++++.......                  .....+++.++..++
T Consensus        76 f~~E~~il~~l~HpNIV~---l~g~~~~~~~~-~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  151 (308)
T 4gt4_A           76 FRHEAMLRARLQHPNVVC---LLGVVTKDQPL-SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV  151 (308)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEECSSSSC-EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCC---cceEEEECCEE-EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHH
Confidence            456999999999999999   99998876653 44444444432211                  123579999999999


Q ss_pred             HHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCc---ccccccc-ccccchhhhhcCCCCCchhH
Q psy323           69 KQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDET---ICREDIH-RQYKAVELIYTKEFDMKIDI  132 (255)
Q Consensus        69 ~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~---~~~~~~~-~~y~aPE~l~~~~~~~~~Di  132 (255)
                      .|++.|| |||           +|||+ +.++.+||+|||+|+......   ..+..++ +.|||||++.+..|+.++||
T Consensus       152 ~qia~gl~yLH~~~iiHRDLK~~NILl-~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDV  230 (308)
T 4gt4_A          152 AQIAAGMEYLSSHHVVHKDLATRNVLV-YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDI  230 (308)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEE-CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCccccceEE-CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchh
Confidence            9999999 998           79999 588999999999998765422   2233455 89999999999999999999


Q ss_pred             HHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHH
Q psy323          133 WSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRI  211 (255)
Q Consensus       133 wSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (255)
                      ||+||++|||+| |..||.+.+      ..+.+..+... ..+                                     
T Consensus       231 wSfGvvl~El~t~g~~Pf~~~~------~~~~~~~i~~~-~~~-------------------------------------  266 (308)
T 4gt4_A          231 WSYGVVLWEVFSYGLQPYCGYS------NQDVVEMIRNR-QVL-------------------------------------  266 (308)
T ss_dssp             HHHHHHHHHHHTTTCCTTTTCC------HHHHHHHHHTT-CCC-------------------------------------
T ss_pred             hhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC-CCC-------------------------------------
Confidence            999999999998 899998654      22322222110 000                                     


Q ss_pred             HHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          212 LAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       212 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                           ..|..++.++.+|+.+||+.||++|||+.|++++
T Consensus       267 -----~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          267 -----PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                 1334567889999999999999999999999875


No 19 
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=1.3e-35  Score=255.46  Aligned_cols=238  Identities=29%  Similarity=0.553  Sum_probs=187.8

Q ss_pred             CchhHHHhhhh--------hhHHHHHHHHHHHHhhh---hhhhhhhcCCCCCCCCcccc---cCCCCHHHHHHHHHHHHH
Q psy323            8 NPDVKVMENMF--------VDAIIARIWIKAVMKKK---KLLLKEILPIQPPHQHKNLT---RSSFSLTTFSKYVKQISQ   73 (255)
Q Consensus         8 ~~e~~~l~~~~--------h~~iv~~~~l~~~~~~~---~~~~~~~~~~~~~l~~~~~~---~~~l~~~~~~~~~~qll~   73 (255)
                      .+|+.+++.+.        |+||++   +++.+...   +..++.++++........+.   .+.+++..++.++.|++.
T Consensus        81 ~~E~~~l~~l~~~~~~~~~~~~iv~---~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~  157 (397)
T 1wak_A           81 LDEIRLLKSVRNSDPNDPNREMVVQ---LLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ  157 (397)
T ss_dssp             HHHHHHHHHHHHSCTTCGGGGGBCC---EEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCCCCcceeee---eecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence            35888898886        777888   77776622   12234455554332222221   246999999999999999


Q ss_pred             hh-ccC------------CCceeeCCCC-------------------------------------------------cEE
Q psy323           74 FV-YMN------------EELLYPTQNI-------------------------------------------------EIV   91 (255)
Q Consensus        74 ~l-ylH------------~niLl~~~~~-------------------------------------------------~~k   91 (255)
                      || |||            +|||+. .++                                                 .+|
T Consensus       158 aL~~lH~~~givHrDikp~NIll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  236 (397)
T 1wak_A          158 GLDYLHTKCRIIHTDIKPENILLS-VNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVK  236 (397)
T ss_dssp             HHHHHHHTTCEECCCCSGGGEEEC-CCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEE
T ss_pred             HHHHHHHhCCEecCCCCHHHeeEe-ccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceE
Confidence            99 998            578884 443                                                 799


Q ss_pred             EeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHH
Q psy323           92 ITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQL  170 (255)
Q Consensus        92 l~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~  170 (255)
                      |+|||+++....  ..+..++ +.|+|||++.+..++.++||||+||++|+|++|+.||.+........+.+++..+.+.
T Consensus       237 l~DfG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~  314 (397)
T 1wak_A          237 IADLGNACWVHK--HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIEL  314 (397)
T ss_dssp             ECCGGGCEETTB--CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHH
T ss_pred             eccccccccccc--cCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHh
Confidence            999999987765  3455567 9999999999999999999999999999999999999987766555567888999999


Q ss_pred             hcCCChhhhhhhhhhccccccccccc--cccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHh
Q psy323          171 MAEIPPNLMDNERCIRNIKVLLERDQ--HNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCL  248 (255)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  248 (255)
                      .|.+|...+..+...   ..++...+  ..+....+ |...+.+...+..+...+..+.+||.+||+.||++|||++|++
T Consensus       315 ~~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  390 (397)
T 1wak_A          315 LGKVPRKLIVAGKYS---KEFFTKKGDLKHITKLKP-WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECL  390 (397)
T ss_dssp             HCSCCHHHHHHCTTG---GGTBCTTSSBSSCCCCCC-CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHH
T ss_pred             cCCCChHHhhccccc---ccccCCccccccccccCC-cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHh
Confidence            999999988777766   55665554  33334444 7788888888888899999999999999999999999999999


Q ss_pred             cCcCCCC
Q psy323          249 QNEWLIK  255 (255)
Q Consensus       249 ~hp~~~~  255 (255)
                      +||||++
T Consensus       391 ~hp~~~~  397 (397)
T 1wak_A          391 RHPWLNS  397 (397)
T ss_dssp             TSGGGGC
T ss_pred             hCccccC
Confidence            9999975


No 20 
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=4.8e-36  Score=258.69  Aligned_cols=225  Identities=19%  Similarity=0.329  Sum_probs=170.0

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhh-----hhhhhcCCCCCCCCc-----ccccCCCCHHHHHHHHHHHHHhh-
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKL-----LLKEILPIQPPHQHK-----NLTRSSFSLTTFSKYVKQISQFV-   75 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-----~~~~~~~~~~~l~~~-----~~~~~~l~~~~~~~~~~qll~~l-   75 (255)
                      ..+|+++++.+.|+||++   +.+++...+.     .++.++++.......     ......+++..++.++.|++.|| 
T Consensus        79 ~~~E~~il~~l~h~niv~---l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~  155 (394)
T 4e7w_A           79 KNRELQIMRIVKHPNVVD---LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA  155 (394)
T ss_dssp             CCHHHHHHHTCCCTTBCC---EEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCcce---EEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence            456999999999999999   8887754332     124445554432111     11246799999999999999999 


Q ss_pred             ccC-----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHH
Q psy323           76 YMN-----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFEL  142 (255)
Q Consensus        76 ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l  142 (255)
                      |||           +|||+...++.+||+|||+|+...........++ +.|+|||++.+. .|+.++||||+||++|+|
T Consensus       156 ~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el  235 (394)
T 4e7w_A          156 YIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAEL  235 (394)
T ss_dssp             HHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             HHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHH
Confidence            998           7999954788999999999988766545555667 999999999876 689999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhh
Q psy323          143 VTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKED  222 (255)
Q Consensus       143 ~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (255)
                      ++|++||.+.+      ..+++..+.+.+|.|+.+.+......     +..   ..++...+ .+....      .+...
T Consensus       236 l~g~~pf~~~~------~~~~l~~i~~~~g~p~~~~~~~~~~~-----~~~---~~~~~~~~-~~~~~~------~~~~~  294 (394)
T 4e7w_A          236 MQGQPLFPGES------GIDQLVEIIKVLGTPSREQIKTMNPN-----YME---HKFPQIRP-HPFSKV------FRPRT  294 (394)
T ss_dssp             HHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHHHCGG-----GSS---SCCCCCCC-CCHHHH------SCTTC
T ss_pred             HhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhChh-----hhh---hccccccC-CcHHHh------ccccC
Confidence            99999999765      67889999999999988766433222     111   11111111 111111      22346


Q ss_pred             HHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          223 AKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       223 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ++++.+||.+||++||++|||+.++++||||++
T Consensus       295 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (394)
T 4e7w_A          295 PPDAIDLISRLLEYTPSARLTAIEALCHPFFDE  327 (394)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGST
T ss_pred             CHHHHHHHHHHhCCChhhCCCHHHHhcChhhhh
Confidence            789999999999999999999999999999974


No 21 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=5.5e-36  Score=257.71  Aligned_cols=236  Identities=15%  Similarity=0.271  Sum_probs=165.9

Q ss_pred             chhHHHhhhh-hhHHHHHHHHHHHHhhhhh-hhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            9 PDVKVMENMF-VDAIIARIWIKAVMKKKKL-LLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         9 ~e~~~l~~~~-h~~iv~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      +|+.+++.+. |+||++   +.+++...+. .++.++++.....+..+..+.+++..+..++.|++.|| |||       
T Consensus        57 ~E~~~l~~l~~h~niv~---l~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHr  133 (388)
T 3oz6_A           57 REIMILTELSGHENIVN---LLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHR  133 (388)
T ss_dssp             HHHHHHHHTTTCTTBCC---EEEEEECTTSSCEEEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHHHhccCCCCCCe---eeeEEecCCCCEEEEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeC
Confidence            5889999997 999999   8888864432 23445555444344444456899999999999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCC----------------------Ccccccccc-ccccchhhhhcC-CCCCch
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPEND----------------------ETICREDIH-RQYKAVELIYTK-EFDMKI  130 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~----------------------~~~~~~~~~-~~y~aPE~l~~~-~~~~~~  130 (255)
                          +|||+ +.++.+||+|||+|+....                      ....+..++ +.|+|||++.+. .|+.++
T Consensus       134 Dlkp~NIll-~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  212 (388)
T 3oz6_A          134 DMKPSNILL-NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGI  212 (388)
T ss_dssp             CCCGGGEEE-CTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHH
T ss_pred             CCCHHHeEE-cCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChh
Confidence                79999 5889999999999986532                      112334456 999999999874 789999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccc----cccCCCCc
Q psy323          131 DIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHN----ITSMNAKD  206 (255)
Q Consensus       131 DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  206 (255)
                      ||||+||++++|++|++||.+.+      ..+++..+...++.|+.+.+...... ....++......    .......+
T Consensus       213 DiwSlG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  285 (388)
T 3oz6_A          213 DMWSLGCILGEILCGKPIFPGSS------TMNQLERIIGVIDFPSNEDVESIQSP-FAKTMIESLKEKVEIRQSNKRDIF  285 (388)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCHHHHHTSCCS-SHHHHHHHHHHHCC-----CCCCH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHhccCH-HHHHHHHhCcccccccCCCHHHhC
Confidence            99999999999999999999765      77899999999999987765322111 000000000000    00000001


Q ss_pred             cHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          207 NFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +...............+.++.+|+.+||++||++|||++|+++||||++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~  334 (388)
T 3oz6_A          286 TKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI  334 (388)
T ss_dssp             HHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred             cchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence            1111112222223356788999999999999999999999999999863


No 22 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.3e-36  Score=255.62  Aligned_cols=219  Identities=19%  Similarity=0.348  Sum_probs=166.6

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhh-----hhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLL-----LKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+.+|+.+.|+||++   +.+++...+..     ++.++++...........+.+++..++.++.|++.|| |||   
T Consensus        72 ~~E~~~l~~l~hpnIv~---l~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~  148 (367)
T 1cm8_A           72 YRELRLLKHMRHENVIG---LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG  148 (367)
T ss_dssp             HHHHHHHHHCCBTTBCC---CSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCcCCCC---ceeeEecCCccccCceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            35999999999999999   88887765321     2334444432223333346799999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhc-CCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~-~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                              +|||+ +.++.+||+|||+++....  ..+..++ +.|+|||++.+ ..++.++||||+||++++|++|++|
T Consensus       149 ivH~Dlkp~NIll-~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p  225 (367)
T 1cm8_A          149 IIHRDLKPGNLAV-NEDCELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL  225 (367)
T ss_dssp             EECCCCCGGGEEE-CTTCCEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             ccccCcCHHHEEE-cCCCCEEEEeeeccccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCC
Confidence                    78888 5789999999999988765  3455666 99999999998 4889999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhcccccccccc----ccccccCCCCccHHHHHHHhcCCChhhHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERD----QHNITSMNAKDNFYRILAKSYKIPKEDAK  224 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      |.+.+      ..+++..+.+..|.|+.+.+...... ....+....    ...+..                .....+.
T Consensus       226 f~~~~------~~~~l~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------------~~~~~~~  282 (367)
T 1cm8_A          226 FKGSD------HLDQLKEIMKVTGTPPAEFVQRLQSD-EAKNYMKGLPELEKKDFAS----------------ILTNASP  282 (367)
T ss_dssp             SCCSS------HHHHHHHHHHHHCCCCHHHHHTCSCH-HHHHHHHHSCCCCCCCGGG----------------TCTTCCH
T ss_pred             CCCCC------HHHHHHHHHHhcCCCCHHHHHHhhhH-HHHHHHHhCCCCCCCCHHH----------------HCCCCCH
Confidence            98765      67889999999999998876432211 001111100    001111                1234568


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ++.+|+.+||+.||++|||++++++||||++
T Consensus       283 ~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~  313 (367)
T 1cm8_A          283 LAVNLLEKMLVLDAEQRVTAGEALAHPYFES  313 (367)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             HHHHHHHHHccCChhHCCCHHHHhcChHHHh
Confidence            8999999999999999999999999999974


No 23 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=3.5e-36  Score=254.83  Aligned_cols=192  Identities=13%  Similarity=0.237  Sum_probs=143.8

Q ss_pred             CCchhHHHhhhhh-hHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc------------------cccCCCCHHHHHHH
Q psy323            7 VNPDVKVMENMFV-DAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN------------------LTRSSFSLTTFSKY   67 (255)
Q Consensus         7 ~~~e~~~l~~~~h-~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~------------------~~~~~l~~~~~~~~   67 (255)
                      +.+|+++|+.+.| +|||+   +++++...+.-++.+++++.......                  ..+..+++.++..|
T Consensus       114 ~~~E~~il~~l~hhpnIV~---l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  190 (353)
T 4ase_A          114 LMSELKILIHIGHHLNVVN---LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY  190 (353)
T ss_dssp             HHHHHHHHHHHCCCTTBCC---EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCcEEE---EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHH
Confidence            3459999999976 89999   88887654432345555555432211                  12356999999999


Q ss_pred             HHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccc---ccccc-ccccchhhhhcCCCCCchh
Q psy323           68 VKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETIC---REDIH-RQYKAVELIYTKEFDMKID  131 (255)
Q Consensus        68 ~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~-~~y~aPE~l~~~~~~~~~D  131 (255)
                      +.|++.|| |||           +|||+ +.++.+||+|||+|+.+..+...   +..++ +.|||||++.+..|+.++|
T Consensus       191 ~~qia~gl~yLH~~~iiHRDLK~~NILl-~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksD  269 (353)
T 4ase_A          191 SFQVAKGMEFLASRKCIHRDLAARNILL-SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  269 (353)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEE-CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHhHhhCCeecCccCccceee-CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCccc
Confidence            99999999 998           79999 57889999999999977553222   22334 8899999999999999999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHH
Q psy323          132 IWSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYR  210 (255)
Q Consensus       132 iwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (255)
                      |||+||++|||+| |+.||.+..      ....+...+.--..+                                    
T Consensus       270 VwS~Gv~l~El~t~G~~Pf~~~~------~~~~~~~~i~~g~~~------------------------------------  307 (353)
T 4ase_A          270 VWSFGVLLWEIFSLGASPYPGVK------IDEEFCRRLKEGTRM------------------------------------  307 (353)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCC------CSHHHHHHHHHTCCC------------------------------------
T ss_pred             EeehHHHHHHHHhCCCCCCCCCC------HHHHHHHHHHcCCCC------------------------------------
Confidence            9999999999998 999998654      122222222110010                                    


Q ss_pred             HHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          211 ILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                            ..|..+++++.+++.+||+.||++|||+.++++|
T Consensus       308 ------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          308 ------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence                  1334567889999999999999999999999986


No 24 
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.2e-35  Score=255.12  Aligned_cols=225  Identities=20%  Similarity=0.317  Sum_probs=167.5

Q ss_pred             CCCchhHHHhhhhhhHHHHHHHHHHHHhhhh-------------------------------------hhhhhhcCCCCC
Q psy323            6 PVNPDVKVMENMFVDAIIARIWIKAVMKKKK-------------------------------------LLLKEILPIQPP   48 (255)
Q Consensus         6 ~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~-------------------------------------~~~~~~~~~~~~   48 (255)
                      ...+|+++|+.+.|+||++   +.+++...+                                     ..++.++++...
T Consensus        46 ~~~~E~~il~~l~hpnIv~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~  122 (383)
T 3eb0_A           46 YKNRELDIMKVLDHVNIIK---LVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD  122 (383)
T ss_dssp             SCCHHHHHHTTCCCTTBCC---EEEEEEEC-------------------------------------CCEEEEEECCCSE
T ss_pred             hHHHHHHHHHHcCCCCccc---hhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc
Confidence            3457999999999999998   766653221                                     113445555443


Q ss_pred             CCCc-----ccccCCCCHHHHHHHHHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccccccc
Q psy323           49 HQHK-----NLTRSSFSLTTFSKYVKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETICREDI  111 (255)
Q Consensus        49 l~~~-----~~~~~~l~~~~~~~~~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~  111 (255)
                      ....     ......+++..++.++.|++.|| |||           +|||+...++.+||+|||+|+............
T Consensus       123 ~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  202 (383)
T 3eb0_A          123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYI  202 (383)
T ss_dssp             EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCC
T ss_pred             cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcc
Confidence            2111     12236799999999999999999 998           689995467899999999999876654555566


Q ss_pred             c-ccccchhhhhcC-CCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhcccc
Q psy323          112 H-RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIK  189 (255)
Q Consensus       112 ~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~  189 (255)
                      + +.|+|||++.+. .++.++||||+||++++|++|++||.+.+      ..+++..+++.+|.|+.+.+......    
T Consensus       203 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~g~p~~~~~~~~~~~----  272 (383)
T 3eb0_A          203 CSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGET------SIDQLVRIIQIMGTPTKEQMIRMNPH----  272 (383)
T ss_dssp             CCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHHHCTT----
T ss_pred             cCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhCcc----
Confidence            6 999999999886 58999999999999999999999998765      77899999999999988766443322    


Q ss_pred             ccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          190 VLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                       +..   ..++.... .....      ..+...+.++.+||.+||++||++|||+.|+++||||+
T Consensus       273 -~~~---~~~~~~~~-~~~~~------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  326 (383)
T 3eb0_A          273 -YTE---VRFPTLKA-KDWRK------ILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFD  326 (383)
T ss_dssp             -C-----CCCCCCCC-CCHHH------HSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGH
T ss_pred             -ccc---ccCCccCc-ccHHh------hCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHH
Confidence             000   01111111 01111      13345678899999999999999999999999999996


No 25 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=9.8e-36  Score=248.92  Aligned_cols=223  Identities=17%  Similarity=0.330  Sum_probs=162.4

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+++++.+.|+||++   +.+++...+.+ +.++++.........  ....+++..++.++.|++.|| |||      
T Consensus        67 ~~E~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH  142 (311)
T 3niz_A           67 IREISLLKELHHPNIVS---LIDVIHSERCL-TLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILH  142 (311)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECCSSCE-EEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHcCCCCEee---eeeEEccCCEE-EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            35999999999999999   88888776653 344444333211111  234599999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                           +|||+ +.++.+||+|||+++..... ...+...+ +.|+|||++.+. .++.++||||+||++++|++|+.||.
T Consensus       143 ~Dikp~NIl~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  221 (311)
T 3niz_A          143 RDLKPQNLLI-NSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP  221 (311)
T ss_dssp             CCCCGGGEEE-CTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CCCchHhEEE-CCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCC
Confidence                 78999 58889999999999877542 23334455 999999999875 68999999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +..      +.+.+..+...++.++...+......   ..+...   ....... .+...       .....++++.+||
T Consensus       222 ~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~-~~~~~-------~~~~~~~~~~~li  281 (311)
T 3niz_A          222 GVT------DDDQLPKIFSILGTPNPREWPQVQEL---PLWKQR---TFQVFEK-KPWSS-------IIPGFCQEGIDLL  281 (311)
T ss_dssp             CSS------TTTHHHHHHHHHCCCCTTTSGGGTTS---HHHHSC---CCCCCCC-CCHHH-------HSTTCCHHHHHHH
T ss_pred             CCC------hHHHHHHHHHHHCCCChHHhhhhhcc---chhhhc---ccccccC-CcHHH-------hCcccCHHHHHHH
Confidence            765      56788889999988776654432221   111110   0000000 01111       1124567889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+||++||++|||++|+++||||++
T Consensus       282 ~~~L~~dP~~Rpt~~ell~hp~f~~  306 (311)
T 3niz_A          282 SNMLCFDPNKRISARDAMNHPYFKD  306 (311)
T ss_dssp             HHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHcCCChhHCCCHHHHhcCccccc
Confidence            9999999999999999999999985


No 26 
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=6.2e-35  Score=249.38  Aligned_cols=239  Identities=28%  Similarity=0.512  Sum_probs=177.4

Q ss_pred             CchhHHHhhhh-----------hhHHHHHHHHHHHHhhhhh---hhhhhcCCCCCCCCcc---cccCCCCHHHHHHHHHH
Q psy323            8 NPDVKVMENMF-----------VDAIIARIWIKAVMKKKKL---LLKEILPIQPPHQHKN---LTRSSFSLTTFSKYVKQ   70 (255)
Q Consensus         8 ~~e~~~l~~~~-----------h~~iv~~~~l~~~~~~~~~---~~~~~~~~~~~l~~~~---~~~~~l~~~~~~~~~~q   70 (255)
                      .+|+++++.+.           |+||++   +.+++...+.   .++.++++........   .....+++..++.++.|
T Consensus        63 ~~e~~~l~~l~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~q  139 (373)
T 1q8y_A           63 EDEIKLLQRVNDADNTKEDSMGANHILK---LLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ  139 (373)
T ss_dssp             HHHHHHHHHHHHTCCSHHHHHHHTTBCC---CCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHH
T ss_pred             hHHHHHHHHhhcccccchhccccchHHH---HHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHH
Confidence            35788888876           677777   6666665431   2234444432211111   12345999999999999


Q ss_pred             HHHhh-ccC------------CCceee-----CCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchh
Q psy323           71 ISQFV-YMN------------EELLYP-----TQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKID  131 (255)
Q Consensus        71 ll~~l-ylH------------~niLl~-----~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~D  131 (255)
                      ++.|| |||            +|||+.     +..+.+||+|||+++....  ..+...+ +.|+|||++.+..++.++|
T Consensus       140 i~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~D  217 (373)
T 1q8y_A          140 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGAD  217 (373)
T ss_dssp             HHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHH
T ss_pred             HHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCC--CCCCCCCCccccCcHHHhCCCCCchHh
Confidence            99999 998            577874     2234799999999987765  3444566 9999999999999999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccc--cccccCCCCccHH
Q psy323          132 IWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQ--HNITSMNAKDNFY  209 (255)
Q Consensus       132 iwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  209 (255)
                      |||+||++|+|++|..||.+..+.....+.+.+..+...+|.+|..++......   ..+++..+  ..+..... |+..
T Consensus       218 i~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~  293 (373)
T 1q8y_A          218 IWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYT---RTFFNSRGLLRNISKLKF-WPLE  293 (373)
T ss_dssp             HHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTH---HHHBCC--CBSSCCCCCB-CCHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchh---hhhcCCcchhcccccccc-cchh
Confidence            999999999999999999877655555567788999999999999887776666   55555544  33333333 7788


Q ss_pred             HHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          210 RILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ..+......+...+.++.+||.+||+.||++|||++++++||||++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  339 (373)
T 1q8y_A          294 DVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD  339 (373)
T ss_dssp             HHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTT
T ss_pred             hhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhc
Confidence            8888888888999999999999999999999999999999999975


No 27 
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.9e-35  Score=256.89  Aligned_cols=224  Identities=16%  Similarity=0.296  Sum_probs=165.5

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhh-----hhhhhcCCCCCCCCc-----ccccCCCCHHHHHHHHHHHHHhh-
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKL-----LLKEILPIQPPHQHK-----NLTRSSFSLTTFSKYVKQISQFV-   75 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-----~~~~~~~~~~~l~~~-----~~~~~~l~~~~~~~~~~qll~~l-   75 (255)
                      ..+|+++|+.+.|+||++   +.+++...+.     .++.++++.......     ......+++..++.++.|++.|| 
T Consensus        94 ~~~E~~il~~l~hpniv~---l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~  170 (420)
T 1j1b_A           94 KNRELQIMRKLDHCNIVR---LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA  170 (420)
T ss_dssp             CCHHHHHHHTCCCTTBCC---EEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCccc---eeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence            456999999999999999   7777643211     123344444332111     12246799999999999999999 


Q ss_pred             ccC-----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHH
Q psy323           76 YMN-----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFEL  142 (255)
Q Consensus        76 ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l  142 (255)
                      |||           +|||+....+.+||+|||+++...........++ +.|+|||++.+. .|+.++||||+||++|+|
T Consensus       171 ~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el  250 (420)
T 1j1b_A          171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL  250 (420)
T ss_dssp             HHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             HHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHH
Confidence            998           7899964557899999999998765444555667 999999999876 789999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhh
Q psy323          143 VTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKED  222 (255)
Q Consensus       143 ~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (255)
                      ++|++||.+.+      ..+++..+++.+|.|+.+.+......     +-.   ..++.... .++...      ++...
T Consensus       251 l~G~~pf~~~~------~~~~l~~i~~~lg~p~~~~~~~~~~~-----~~~---~~~p~~~~-~~~~~~------~~~~~  309 (420)
T 1j1b_A          251 LLGQPIFPGDS------GVDQLVEIIKVLGTPTREQIREMNPN-----YTE---FKFPQIKA-HPWTKV------FRPRT  309 (420)
T ss_dssp             HHSSCSSCCSS------HHHHHHHHHHHHCSCCHHHHHHHCSC-----CCC---CCCCCCCC-CCHHHH------SCTTS
T ss_pred             HhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhChh-----hhh---hccCccCC-CCHHHh------cCCCC
Confidence            99999998765      67889999999999987766432211     100   01111111 111111      22345


Q ss_pred             HHHHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          223 AKQLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       223 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      +.++.+||.+||++||.+|||+.|+++||||+
T Consensus       310 ~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~  341 (420)
T 1j1b_A          310 PPEAIALCSRLLEYTPTARLTPLEACAHSFFD  341 (420)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             CHHHHHHHHHhccCChhHCCCHHHHhCCHhhc
Confidence            68899999999999999999999999999996


No 28 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=3.4e-35  Score=245.01  Aligned_cols=220  Identities=16%  Similarity=0.274  Sum_probs=160.8

Q ss_pred             chhHHHhhhh---hhHHHHHHHHHHHHhhhhh----hhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-cc
Q psy323            9 PDVKVMENMF---VDAIIARIWIKAVMKKKKL----LLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YM   77 (255)
Q Consensus         9 ~e~~~l~~~~---h~~iv~~~~l~~~~~~~~~----~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-yl   77 (255)
                      +|+.+++.+.   |+||++   +++++.....    .++.++++........+   ....+++..++.++.|++.|| ||
T Consensus        60 ~e~~~l~~l~~~~h~niv~---~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~l  136 (308)
T 3g33_A           60 REVALLRRLEAFEHPNVVR---LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL  136 (308)
T ss_dssp             HHHHHHHHHHHHCCTTBCC---EEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCCeEE---eeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            5778887776   999999   8887765432    12334444333211111   123499999999999999999 99


Q ss_pred             C-----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhC
Q psy323           78 N-----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        78 H-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g  145 (255)
                      |           +|||+ +.++.+||+|||+++........+...+ +.|+|||++.+..++.++||||+||++++|++|
T Consensus       137 H~~~ivH~Dlkp~Nil~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g  215 (308)
T 3g33_A          137 HANCIVHRDLKPENILV-TSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR  215 (308)
T ss_dssp             HHTTCCCSCCCTTTEEE-CTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTS
T ss_pred             HHCCcccCCCCHHHEEE-cCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhC
Confidence            8           79999 5888999999999988766545555566 999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      ++||.+.+      +.+.+..+.+..+.++...|.......  ...+.       ...+ .+...       .....+.+
T Consensus       216 ~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~-~~~~~-------~~~~~~~~  272 (308)
T 3g33_A          216 KPLFCGNS------EADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFP-------PRGP-RPVQS-------VVPEMEES  272 (308)
T ss_dssp             SCSCCCSS------HHHHHHHHHHHHCCCCTTTSCSSCSSC--GGGSC-------CCCC-CCHHH-------HSCSCCHH
T ss_pred             CCCCCCCC------HHHHHHHHHHHhCCCChhhccchhhcc--ccccC-------CCCC-CcHHH-------hCccccHH
Confidence            99998765      677888899999988766553222110  00000       0000 00000       11245688


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+||.+||++||++|||+.|+++||||++
T Consensus       273 ~~~li~~~L~~dP~~R~t~~e~l~h~~~~~  302 (308)
T 3g33_A          273 GAQLLLEMLTFNPHKRISAFRALQHSYLHK  302 (308)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSTTC--
T ss_pred             HHHHHHHHhcCCCccCCCHHHHhcCccccC
Confidence            899999999999999999999999999974


No 29 
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=3.2e-35  Score=258.16  Aligned_cols=227  Identities=18%  Similarity=0.271  Sum_probs=157.9

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhh----hhhhhhcCCCCCCCCccc-ccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKK----LLLKEILPIQPPHQHKNL-TRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~----~~~~~~~~~~~~l~~~~~-~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+++|+.+.|+||++   +++++....    ..++.++++........+ ....+++..++.++.||+.|| |||   
T Consensus       100 ~~E~~~l~~l~h~niv~---l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  176 (458)
T 3rp9_A          100 LREIAILNRLNHDHVVK---VLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG  176 (458)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCCCCCc---eEEEEecCCcccCceEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            35999999999999999   888874332    123555555443222222 235699999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCC----------------------------cccccccc-ccccchhhh
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDE----------------------------TICREDIH-RQYKAVELI  121 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~----------------------------~~~~~~~~-~~y~aPE~l  121 (255)
                              +|||+ +.++.+||+|||+|+.....                            ...+..++ +.|+|||++
T Consensus       177 iiHrDlKp~NILl-~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~  255 (458)
T 3rp9_A          177 ILHRDLKPANCLV-NQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELI  255 (458)
T ss_dssp             CBCCCCCGGGEEE-CTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHH
T ss_pred             cCCCCCChhhEEE-CCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHh
Confidence                    79999 58899999999999876531                            12344456 889999987


Q ss_pred             hc-CCCCCchhHHHHHHHHHHHhh-----------CCCCCCCCCCCC--------------CCccHHHHHHHHHHhcCCC
Q psy323          122 YT-KEFDMKIDIWSTACLTFELVT-----------GDYMFNPFESKY--------------YTIDEHHILKIIQLMAEIP  175 (255)
Q Consensus       122 ~~-~~~~~~~DiwSlG~il~~l~~-----------g~~pf~~~~~~~--------------~~~~~~~l~~i~~~~~~~~  175 (255)
                      .+ ..|+.++||||+||++|+|++           |+++|.|.+...              .....+++..+++.+|.|+
T Consensus       256 ~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~  335 (458)
T 3rp9_A          256 LLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPS  335 (458)
T ss_dssp             TTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCC
T ss_pred             hCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCC
Confidence            54 479999999999999999998           778887643100              0013578899999999998


Q ss_pred             hhhhhhhhhhccccccccc----cccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCc
Q psy323          176 PNLMDNERCIRNIKVLLER----DQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNE  251 (255)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  251 (255)
                      .+.+...... .+..+...    .......                .....+.++.+||.+||++||++|||++|+|+||
T Consensus       336 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------------~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp  398 (458)
T 3rp9_A          336 EEDIEALEKE-DAKRYIRIFPKREGTDLAE----------------RFPASSADAIHLLKRMLVFNPNKRITINECLAHP  398 (458)
T ss_dssp             HHHHHTSSCH-HHHHHHTTSCCCCCCCGGG----------------GSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             HHHHhhcCCH-HHHHHHHhcCCCCCCCHHH----------------HCCCCCHHHHHHHHHHhccCccccCCHHHHhcCH
Confidence            8765432221 01111110    0001110                1123468899999999999999999999999999


Q ss_pred             CCCC
Q psy323          252 WLIK  255 (255)
Q Consensus       252 ~~~~  255 (255)
                      ||++
T Consensus       399 ~f~~  402 (458)
T 3rp9_A          399 FFKE  402 (458)
T ss_dssp             GGTT
T ss_pred             hhhh
Confidence            9974


No 30 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=4e-35  Score=242.81  Aligned_cols=220  Identities=15%  Similarity=0.257  Sum_probs=162.2

Q ss_pred             chhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            9 PDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      +|+.+++.+.|+||++   +.+++...+.. +.++++.........  ..+.+++..++.++.|++.|| |||       
T Consensus        50 ~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~  125 (292)
T 3o0g_A           50 REICLLKELKHKNIVR---LHDVLHSDKKL-TLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHR  125 (292)
T ss_dssp             HHHHHHTTCCCTTBCC---EEEEEEETTEE-EEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHHhcCCCCCEee---EEeEEEeCCEE-EEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            5999999999999999   88888776653 444444433221111  236799999999999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCC-CCCchhHHHHHHHHHHHhhCCCCC-C
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKE-FDMKIDIWSTACLTFELVTGDYMF-N  150 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~-~~~~~DiwSlG~il~~l~~g~~pf-~  150 (255)
                          +||++ +.++.+||+|||+++...... ......+ +.|+|||++.+.. ++.++||||+||++++|++|..|| .
T Consensus       126 dikp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~  204 (292)
T 3o0g_A          126 DLKPQNLLI-NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP  204 (292)
T ss_dssp             CCSGGGEEE-CTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred             CCCHHHEEE-cCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC
Confidence                78999 588999999999998775422 2334455 8999999998874 899999999999999999877665 4


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccc-cccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHN-ITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      +.+      ..+.+..+....+.++...|......   ..+....... .....             ......+.++.+|
T Consensus       205 ~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l  262 (292)
T 3o0g_A          205 GND------VDDQLKRIFRLLGTPTEEQWPSMTKL---PDYKPYPMYPATTSLV-------------NVVPKLNATGRDL  262 (292)
T ss_dssp             CSS------HHHHHHHHHHHHCCCCTTTCTTGGGS---TTCCCCCCCCTTCCCT-------------TTSTTCCHHHHHH
T ss_pred             CCC------HHHHHHHHHHHhCCCChhhhhhhccc---ccccccccccCCcchh-------------hcccccChHHHHH
Confidence            332      56788889999998877766543332   1111100000 00000             1223467889999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+||+.||++|||++|+++||||++
T Consensus       263 i~~~L~~dP~~R~t~~e~l~hp~f~~  288 (292)
T 3o0g_A          263 LQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHhccChhhCCCHHHHhcCccccc
Confidence            99999999999999999999999985


No 31 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=3.6e-35  Score=250.29  Aligned_cols=198  Identities=18%  Similarity=0.336  Sum_probs=153.7

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC--cccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH--KNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+|+.+.||||++   +.+++...+.+ +.++++..+...  .....+.+++..++.++.|++.|| |||     
T Consensus        62 ~~~E~~il~~l~hpnIv~---l~~~~~~~~~~-~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv  137 (361)
T 2yab_A           62 IEREVSILRQVLHPNIIT---LHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA  137 (361)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhCCCcCCCc---EEEEEEeCCEE-EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            346999999999999999   88888776653 455555543322  222346799999999999999999 998     


Q ss_pred             ------CCceeeCCCC---cEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 ------EELLYPTQNI---EIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 ------~niLl~~~~~---~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                            +|||+.+.++   .+||+|||+++...........++ +.|+|||++.+..|+.++||||+||++|+|++|.+|
T Consensus       138 HrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~P  217 (361)
T 2yab_A          138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP  217 (361)
T ss_dssp             CCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred             cCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence                  7889853332   799999999998776545556667 999999999998999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+.+      ..+.+..+.......+...+                                        ...+.++.+
T Consensus       218 f~~~~------~~~~~~~i~~~~~~~~~~~~----------------------------------------~~~s~~~~~  251 (361)
T 2yab_A          218 FLGDT------KQETLANITAVSYDFDEEFF----------------------------------------SQTSELAKD  251 (361)
T ss_dssp             SCCSS------HHHHHHHHHTTCCCCCHHHH----------------------------------------TTSCHHHHH
T ss_pred             CCCCC------HHHHHHHHHhcCCCCCchhc----------------------------------------cCCCHHHHH
Confidence            98654      33444444332222221111                                        234678899


Q ss_pred             HHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      ||.+||+.||++|||++++++||||+
T Consensus       252 li~~~L~~dP~~R~t~~e~l~hp~~~  277 (361)
T 2yab_A          252 FIRKLLVKETRKRLTIQEALRHPWIT  277 (361)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred             HHHHHCCCChhHCcCHHHHhcCcCcC
Confidence            99999999999999999999999997


No 32 
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2.6e-35  Score=251.83  Aligned_cols=222  Identities=20%  Similarity=0.326  Sum_probs=152.4

Q ss_pred             chhHHHhhhhhhHHHHHHHHHHHHhhhhh-----hhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            9 PDVKVMENMFVDAIIARIWIKAVMKKKKL-----LLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +|+.+++.+.|+||++   +.+++.....     .++.++++........+..+.+++..++.++.|++.|| |||    
T Consensus        77 ~E~~~l~~l~hpnIv~---~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  153 (367)
T 2fst_X           77 RELRLLKHMKHENVIG---LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI  153 (367)
T ss_dssp             HHHHHHHHCCCTTBCC---CSEEECSCSSGGGCCCCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhCCCCCCCc---EEEEEecCCccccCCeEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            5999999999999999   8887764311     12333333333333333446799999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhc-CCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~-~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                             +|||+ +.++.+||+|||+++....  ..+..++ +.|+|||++.+ ..++.++||||+||++++|++|++||
T Consensus       154 vH~Dlkp~NIll-~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf  230 (367)
T 2fst_X          154 IHRDLKPSNLAV-NEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF  230 (367)
T ss_dssp             CCCCCCGGGEEE-CTTCCEEECC-----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred             eeCCCCHhhEEE-CCCCCEEEeeccccccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                   78998 5888999999999987655  3445566 99999999988 47899999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+.+      ..+++..+.+.+|.|+.+.+...... .+..+..    .+...+. .+....       ....+.++.+|
T Consensus       231 ~~~~------~~~~l~~i~~~~g~p~~~~~~~~~~~-~~~~~~~----~~~~~~~-~~~~~~-------~~~~~~~~~dL  291 (367)
T 2fst_X          231 PGTD------HIDQLKLILRLVGTPGAELLKKISSE-SARNYIQ----SLTQMPK-MNFANV-------FIGANPLAVDL  291 (367)
T ss_dssp             CCSS------HHHHHHHHHHHHCSCCHHHHTTCCCH-HHHHHHH----TSCCCCC-CCHHHH-------TTTCCHHHHHH
T ss_pred             CCCC------HHHHHHHHHHHhCCCCHHHHHHhhhH-HHHHHHh----ccCCCCC-CCHHHH-------CCCCCHHHHHH
Confidence            8765      67889999999999988765432211 0011111    0111111 111111       12346788999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      |.+||+.||++|||++++++||||++
T Consensus       292 l~~mL~~dP~~R~t~~e~L~hp~~~~  317 (367)
T 2fst_X          292 LEKMLVLDSDKRITAAQALAHAYFAQ  317 (367)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHhCCCCcccCcCHHHHhcChhhhh
Confidence            99999999999999999999999974


No 33 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=6.2e-35  Score=245.82  Aligned_cols=193  Identities=23%  Similarity=0.338  Sum_probs=153.2

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC--cccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH--KNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+++|+.+.|+||++   +.+++...+.+ +.++++......  .....+.+++..++.++.|++.|| |||      
T Consensus        62 ~~E~~~l~~l~hpnIv~---l~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivH  137 (328)
T 3fe3_A           62 FREVRIMKILNHPNIVK---LFEVIETEKTL-YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVH  137 (328)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHhCCCCCEee---EEEEEEECCEE-EEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence            46999999999999999   88888776664 566666544332  222346799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCC-CchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFD-MKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~-~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.++.+||+|||+++...........++ +.|+|||++.+..+. +++||||+||++++|++|+.||.+
T Consensus       138 rDlkp~NIll-~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  216 (328)
T 3fe3_A          138 RDLKAENLLL-DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG  216 (328)
T ss_dssp             SCCCGGGEEE-CTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCCHHHEEE-cCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence                 78999 5889999999999988766555666677 999999999998765 799999999999999999999986


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      .......+..                                            ..+..|...+.++.+|+.
T Consensus       217 ~~------~~~~~~~i~~--------------------------------------------~~~~~p~~~s~~~~~li~  246 (328)
T 3fe3_A          217 QN------LKELRERVLR--------------------------------------------GKYRIPFYMSTDCENLLK  246 (328)
T ss_dssp             SS------HHHHHHHHHH--------------------------------------------CCCCCCTTSCHHHHHHHH
T ss_pred             CC------HHHHHHHHHh--------------------------------------------CCCCCCCCCCHHHHHHHH
Confidence            53      2222222211                                            111133456688999999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||+.||.+|||++++++||||+.
T Consensus       247 ~~L~~dP~~R~t~~eil~h~~~~~  270 (328)
T 3fe3_A          247 RFLVLNPIKRGTLEQIMKDRWINA  270 (328)
T ss_dssp             HHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred             HHCCCChhHCcCHHHHhcCHhhcC
Confidence            999999999999999999999963


No 34 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=4.3e-35  Score=245.63  Aligned_cols=227  Identities=20%  Similarity=0.349  Sum_probs=166.6

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc-------ccCCCCHHHHHHHHHHHHHhh-ccC-
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL-------TRSSFSLTTFSKYVKQISQFV-YMN-   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~l~~~~~~~~~~qll~~l-ylH-   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++........+       ....+++..++.++.|++.|| ||| 
T Consensus        51 ~~E~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~  126 (317)
T 2pmi_A           51 IREISLMKELKHENIVR---LYDVIHTENKL-TLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE  126 (317)
T ss_dssp             HHHHHHHTTCCBTTBCC---EEEEECCTTEE-EEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCcce---EEEEEEECCeE-EEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35999999999999999   88888876653 344444333111111       124599999999999999999 998 


Q ss_pred             ----------CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHHhhC
Q psy323           79 ----------EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 ----------~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l~~g  145 (255)
                                +|||+ +.++.+||+|||+++..... .......+ +.|+|||++.+. .++.++||||+||++++|++|
T Consensus       127 ~~ivH~Dlkp~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  205 (317)
T 2pmi_A          127 NKILHRDLKPQNLLI-NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG  205 (317)
T ss_dssp             TTEECCCCCGGGEEE-CTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCeeeCCCChHHeEE-cCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence                      78999 58889999999999877542 22334455 999999999875 689999999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      +.||.+.+      +.+.+..+.+.+|.++...|......   ..+..    .+....+ ....+.+...  .+...+.+
T Consensus       206 ~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~-~~~~~~~~~~--~~~~~~~~  269 (317)
T 2pmi_A          206 KPLFPGTN------DEEQLKLIFDIMGTPNESLWPSVTKL---PKYNP----NIQQRPP-RDLRQVLQPH--TKEPLDGN  269 (317)
T ss_dssp             SCSCCCSS------HHHHHHHHHHHHCSCCTTTCGGGGGC---TTCCT----TCCCCCC-CCSHHHHGGG--CSSCCCHH
T ss_pred             CCCCCCCC------hHHHHHHHHHHhCCCChhHhhhhhhh---hhccc----ccccccc-hhHHHhhccc--ccccCCHH
Confidence            99998765      66788889999999887766543322   11110    1111111 1112222111  22345688


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+||.+||+.||++|||++|+++||||++
T Consensus       270 l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  299 (317)
T 2pmi_A          270 LMDFLHGLLQLNPDMRLSAKQALHHPWFAE  299 (317)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             HHHHHHHHCCCCcccCCCHHHHhCChhhhc
Confidence            999999999999999999999999999974


No 35 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=4.2e-35  Score=242.30  Aligned_cols=220  Identities=20%  Similarity=0.330  Sum_probs=158.6

Q ss_pred             chhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            9 PDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      +|+.+++.+.|+||++   +.+++...+.. +.++++........  ...+.+++..++.++.|++.|| |||       
T Consensus        49 ~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~  124 (288)
T 1ob3_A           49 REISILKELKHSNIVK---LYDVIHTKKRL-VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR  124 (288)
T ss_dssp             HHHHGGGGCCCTTBCC---EEEEEECSSCE-EEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             HHHHHHHhcCCCCEee---eeeEEccCCeE-EEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence            5999999999999999   88888776653 34444433211111  1235799999999999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                          +||++ +.++.+||+|||+++..... ...+...+ +.|+|||++.+. .++.++||||+||++++|++|.+||.+
T Consensus       125 dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  203 (288)
T 1ob3_A          125 DLKPQNLLI-NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG  203 (288)
T ss_dssp             CCCGGGEEE-CTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCHHHEEE-cCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                78898 58899999999999876542 22334455 899999999875 689999999999999999999999986


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCC-CccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNA-KDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      .+      +.+.+..+....+.++...|......   ..+-.    ......+ .|.         ......+.++.+|+
T Consensus       204 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~---------~~~~~~~~~~~~li  261 (288)
T 1ob3_A          204 VS------EADQLMRIFRILGTPNSKNWPNVTEL---PKYDP----NFTVYEPLPWE---------SFLKGLDESGIDLL  261 (288)
T ss_dssp             SS------HHHHHHHHHHHHCCCCTTTSTTGGGS---TTCCT----TCCCCCCCCGG---------GTCCSCCHHHHHHH
T ss_pred             CC------HHHHHHHHHHHHCCCChhhchhhhcc---ccccc----ccccccCccHH---------HHhhhcCHHHHHHH
Confidence            54      66788888888888766554332221   00000    0000000 000         01234678889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+||+.||++|||++++++||||++
T Consensus       262 ~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          262 SKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             HHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             HHHcCCCcccCCCHHHHhcCcchhh
Confidence            9999999999999999999999975


No 36 
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=3.5e-34  Score=249.59  Aligned_cols=225  Identities=20%  Similarity=0.319  Sum_probs=162.2

Q ss_pred             chhHHHhhhhh------hHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC
Q psy323            9 PDVKVMENMFV------DAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN   78 (255)
Q Consensus         9 ~e~~~l~~~~h------~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH   78 (255)
                      +|+.+++.+.|      +||+.   +.+.+...+.+ +.++++........+   ....+++..++.++.|++.|| |||
T Consensus       142 ~E~~~l~~l~~~~~~~~~~iv~---~~~~~~~~~~~-~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH  217 (429)
T 3kvw_A          142 EEIRILEHLRKQDKDNTMNVIH---MLENFTFRNHI-CMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH  217 (429)
T ss_dssp             HHHHHHHHHHTTCTTSCSCBCC---EEEEEEETTEE-EEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhccccCCcCEEE---EEeecccCCeE-EEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            46777777743      47777   66666555442 334444333211111   123599999999999999999 998


Q ss_pred             -----------CCceeeCCCCc--EEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh
Q psy323           79 -----------EELLYPTQNIE--IVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT  144 (255)
Q Consensus        79 -----------~niLl~~~~~~--~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~  144 (255)
                                 +|||+. .++.  +||+|||+|+....  .....++ +.|+|||++.+..++.++||||+||++|+|++
T Consensus       218 ~~~ivHrDlKp~NILl~-~~~~~~vkL~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  294 (429)
T 3kvw_A          218 KNRIIHCDLKPENILLK-QQGRSGIKVIDFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT  294 (429)
T ss_dssp             HHTEECSCCSGGGEEES-STTSCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHH
T ss_pred             HCCeecCCCCHHHeEEc-cCCCcceEEeecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHh
Confidence                       799994 6555  99999999987655  3445566 99999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhcccccccccccccc------------------------c
Q psy323          145 GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNI------------------------T  200 (255)
Q Consensus       145 g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~  200 (255)
                      |.+||.+.+      +.+++..+.+.+|.|+..++......   ..++...+.+.                        .
T Consensus       295 G~~pf~~~~------~~~~l~~i~~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (429)
T 3kvw_A          295 GYPLLPGED------EGDQLACMIELLGMPSQKLLDASKRA---KNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLR  365 (429)
T ss_dssp             SSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHTBTTH---HHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEE
T ss_pred             CCCCCCCCC------HHHHHHHHHHHcCCCCHHHHHhhhhh---hhccCCCCCcccccccccccccccccccccchhhcc
Confidence            999998765      77889999999999999887655444   33443322100                        0


Q ss_pred             cCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          201 SMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ..+........      .+...++++.+||.+||++||++|||++|+|+||||++
T Consensus       366 ~~~~~~~~~~~------l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~  414 (429)
T 3kvw_A          366 GPPESREWGNA------LKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR  414 (429)
T ss_dssp             CSTTCSCHHHH------TTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-
T ss_pred             CCccchhhHhh------ccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhcc
Confidence            00000111111      22334688999999999999999999999999999985


No 37 
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=7.8e-35  Score=253.96  Aligned_cols=231  Identities=19%  Similarity=0.257  Sum_probs=158.0

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhh----hhhhhhcCCCCCCCCccc-ccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKK----LLLKEILPIQPPHQHKNL-TRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~----~~~~~~~~~~~~l~~~~~-~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+++|+.+.|+||++   +++++....    ..++.++++........+ ....+++..++.++.|++.|| |||   
T Consensus        73 ~~E~~~l~~l~h~nIv~---l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g  149 (432)
T 3n9x_A           73 LREITILNRLKSDYIIR---LYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG  149 (432)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEECCCSCTTTCCCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHcCCCCcce---EEEEEecCCCCcCCeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            36999999999999999   888776553    112444444333222222 235699999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCc-----------------------ccccccc-ccccchhhhhcC-C
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDET-----------------------ICREDIH-RQYKAVELIYTK-E  125 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~-----------------------~~~~~~~-~~y~aPE~l~~~-~  125 (255)
                              +|||+ +.++.+||+|||+|+......                       ..+..++ +.|+|||++.+. .
T Consensus       150 ivHrDlkp~NILl-~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~  228 (432)
T 3n9x_A          150 IIHRDLKPANCLL-NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQEN  228 (432)
T ss_dssp             EECCCCCGGGEEE-CTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSC
T ss_pred             CCCCCCCHHHeEE-CCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCC
Confidence                    79999 588999999999998775421                       2355566 999999997544 7


Q ss_pred             CCCchhHHHHHHHHHHHhh-----------CCCCCCCCCCCC-----------CCccHHHHHHHHHHhcCCChhhhhhhh
Q psy323          126 FDMKIDIWSTACLTFELVT-----------GDYMFNPFESKY-----------YTIDEHHILKIIQLMAEIPPNLMDNER  183 (255)
Q Consensus       126 ~~~~~DiwSlG~il~~l~~-----------g~~pf~~~~~~~-----------~~~~~~~l~~i~~~~~~~~~~~~~~~~  183 (255)
                      |+.++||||+||++++|++           |.++|.|.+.-.           .....+++..+++.+|.|+.+.+....
T Consensus       229 ~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~  308 (432)
T 3n9x_A          229 YTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNIN  308 (432)
T ss_dssp             CCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCC
T ss_pred             CCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhcc
Confidence            9999999999999999998           455554432100           001367899999999999887654322


Q ss_pred             hhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          184 CIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .. .+..+...    .....+ .+....       ....+.++.+||.+||++||++|||++|+++||||++
T Consensus       309 ~~-~~~~~~~~----~~~~~~-~~~~~~-------~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  367 (432)
T 3n9x_A          309 KP-EVIKYIKL----FPHRKP-INLKQK-------YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD  367 (432)
T ss_dssp             CH-HHHHHHHT----SCCCCC-CCHHHH-------STTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTT
T ss_pred             CH-HHHHHHHh----CCCCCC-CCHHHH-------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhh
Confidence            21 01111110    000000 111110       1235788999999999999999999999999999974


No 38 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.1e-34  Score=243.77  Aligned_cols=225  Identities=14%  Similarity=0.293  Sum_probs=160.1

Q ss_pred             CCCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            6 PVNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         6 ~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+.+|+.+++.+.|+||++   +.+++...+.. +.++++.........  ....+++..++.++.|++.|| |||    
T Consensus        46 ~~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  121 (324)
T 3mtl_A           46 TAIREVSLLKDLKHANIVT---LHDIIHTEKSL-TLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV  121 (324)
T ss_dssp             CCCCCHHHHSCCCCTTBCC---EEEEEECSSCE-EEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hHHHHHHHHHhcCCCCCCe---eeeEEeeCCEE-EEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            4557999999999999999   88888776653 344444332111111  134699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                             +||++ +.++.+||+|||+++...... ......+ +.|+|||++.+. .++.++||||+||++++|++|+.|
T Consensus       122 vH~Dikp~NIl~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  200 (324)
T 3mtl_A          122 LHRDLKPQNLLI-NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPL  200 (324)
T ss_dssp             EESSCCGGGEEE-CTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCCcCHHHEEE-CCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                   78999 578899999999998765422 2333455 899999999875 789999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+.+      ..+++..+...++.|+...|........   +..   ........ .....       .....+.++.+
T Consensus       201 f~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~-~~~~~-------~~~~~~~~~~~  260 (324)
T 3mtl_A          201 FPGST------VEEQLHFIFRILGTPTEETWPGILSNEE---FKT---YNYPKYRA-EALLS-------HAPRLDSDGAD  260 (324)
T ss_dssp             CCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGCHH---HHH---TCCCCCCC-CCHHH-------HCTTSCHHHHH
T ss_pred             CCCCC------HHHHHHHHHHHhCCCChHhchhhhcchh---hcc---cccccccc-hhhhh-------hcCCCCHHHHH
Confidence            98765      6788889999999988776543322200   000   00000000 00000       11245678899


Q ss_pred             HHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ||.+||++||++|||++|+++||||++
T Consensus       261 li~~~L~~dP~~R~t~~e~l~hp~f~~  287 (324)
T 3mtl_A          261 LLTKLLQFEGRNRISAEDAMKHPFFLS  287 (324)
T ss_dssp             HHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             HHHHHcCcCcccCCCHHHHhcChhhhh
Confidence            999999999999999999999999963


No 39 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1e-34  Score=243.88  Aligned_cols=198  Identities=18%  Similarity=0.262  Sum_probs=153.4

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.........   ....+++..++.++.|++.|| |||     
T Consensus        49 ~~E~~~l~~l~hpnIv~---~~~~~~~~~~~-~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~giv  124 (321)
T 1tki_A           49 KKEISILNIARHRNILH---LHESFESMEEL-VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG  124 (321)
T ss_dssp             HHHHHHHHHSCCTTBCC---EEEEEEETTEE-EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhCCCCCCCe---EeEEEecCCEE-EEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            46999999999999999   88888776663 556666554332221   124699999999999999999 998     


Q ss_pred             ------CCceeeCC-CCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 ------EELLYPTQ-NIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 ------~niLl~~~-~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                            +|||+... ++.+||+|||+++............+ +.|+|||++.+..++.++||||+||++|+|++|..||.
T Consensus       125 H~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  204 (321)
T 1tki_A          125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL  204 (321)
T ss_dssp             CCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence                  78999532 78999999999998766545555566 99999999998888999999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +.+      ....+..+......++...+                                        ...+.++.+|+
T Consensus       205 ~~~------~~~~~~~i~~~~~~~~~~~~----------------------------------------~~~s~~~~~li  238 (321)
T 1tki_A          205 AET------NQQIIENIMNAEYTFDEEAF----------------------------------------KEISIEAMDFV  238 (321)
T ss_dssp             CSS------HHHHHHHHHHTCCCCCHHHH----------------------------------------TTSCHHHHHHH
T ss_pred             CCC------HHHHHHHHHcCCCCCChhhh----------------------------------------ccCCHHHHHHH
Confidence            654      33334444332222221111                                        13467889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+||+.||.+|||+.|+++||||++
T Consensus       239 ~~~L~~dp~~Rpt~~e~l~hp~~~~  263 (321)
T 1tki_A          239 DRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             HTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             HHHcCCChhHCcCHHHHhcChhhcc
Confidence            9999999999999999999999863


No 40 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=7.2e-35  Score=245.47  Aligned_cols=225  Identities=17%  Similarity=0.288  Sum_probs=160.5

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCC-CCcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPH-QHKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.... .........+++..++.++.|++.|| |||      
T Consensus        80 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH  155 (329)
T 3gbz_A           80 AIREVSLLKELQHRNIIE---LKSVIHHNHRL-HLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLH  155 (329)
T ss_dssp             CHHHHHHGGGCCCTTBCC---EEEEEEETTEE-EEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHcCCCCcce---EEEEEecCCEE-EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEC
Confidence            446999999999999999   88888776653 4444443331 12222235699999999999999999 998      


Q ss_pred             -----CCceee----CCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHHhhCC
Q psy323           79 -----EELLYP----TQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 -----~niLl~----~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l~~g~  146 (255)
                           +|||+.    +..+.+||+|||+++..... ......++ +.|+|||++.+. .++.++||||+||++++|++|.
T Consensus       156 ~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  235 (329)
T 3gbz_A          156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT  235 (329)
T ss_dssp             SCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence                 789995    23456999999999876542 23334455 899999999886 5899999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+..      +.+.+..+....+.++...+......   ..+.    ........ ......+      +...+.++
T Consensus       236 ~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~-~~~~~~~------~~~~~~~~  295 (329)
T 3gbz_A          236 PLFPGDS------EIDQLFKIFEVLGLPDDTTWPGVTAL---PDWK----QSFPKFRG-KTLKRVL------GALLDDEG  295 (329)
T ss_dssp             CSSCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGS---TTCC----TTCCCCCC-CCHHHHH------GGGSCHHH
T ss_pred             CCcCCCC------HHHHHHHHHHHhCCCchhhhhhhhhh---hhhh----hhhhhhcc-ccHhhhc------ccccCHHH
Confidence            9998665      67788889999998877665433322   1111    11111111 1111111      12356888


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+||.+||++||++|||++|+++||||++
T Consensus       296 ~~li~~~L~~dP~~R~t~~e~l~hp~f~~  324 (329)
T 3gbz_A          296 LDLLTAMLEMDPVKRISAKNALEHPYFSH  324 (329)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             HHHHHHHccCChhhCCCHHHHhCCcccCC
Confidence            99999999999999999999999999985


No 41 
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.4e-34  Score=250.37  Aligned_cols=239  Identities=15%  Similarity=0.227  Sum_probs=155.7

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhh-hhhhhhhcCCCCCCCCccc----------ccCCCCHHHHHHHHHHHHHhh-
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKK-KLLLKEILPIQPPHQHKNL----------TRSSFSLTTFSKYVKQISQFV-   75 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~-~~~~~~~~~~~~~l~~~~~----------~~~~l~~~~~~~~~~qll~~l-   75 (255)
                      .+|+.+|+.+.|+||++   +.+++... +..++.++++........+          ....+++..++.++.|++.|| 
T Consensus        66 ~~E~~~l~~l~hpniv~---~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~  142 (405)
T 3rgf_A           66 CREIALLRELKHPNVIS---LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH  142 (405)
T ss_dssp             HHHHHHHHHCCCTTBCC---CCEEEEETTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCeee---EeeEEecCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHH
Confidence            35999999999999999   88887432 2222444444332111111          112499999999999999999 


Q ss_pred             ccC-----------CCceee---CCCCcEEEeecCccccCCCC----cccccccc-ccccchhhhhcC-CCCCchhHHHH
Q psy323           76 YMN-----------EELLYP---TQNIEIVITDLEYVRPENDE----TICREDIH-RQYKAVELIYTK-EFDMKIDIWST  135 (255)
Q Consensus        76 ylH-----------~niLl~---~~~~~~kl~DfG~a~~~~~~----~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSl  135 (255)
                      |||           +|||+.   +.++.+||+|||+|+.....    ......++ +.|+|||++.+. .++.++||||+
T Consensus       143 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSl  222 (405)
T 3rgf_A          143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAI  222 (405)
T ss_dssp             HHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHH
T ss_pred             HHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHH
Confidence            998           789984   34689999999999877542    12233455 899999999986 58999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCCC---CCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHH
Q psy323          136 ACLTFELVTGDYMFNPFESK---YYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRIL  212 (255)
Q Consensus       136 G~il~~l~~g~~pf~~~~~~---~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (255)
                      ||++|+|++|.+||.+....   ......+++..++..+|.|+...|......   ..+....................+
T Consensus       223 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  299 (405)
T 3rgf_A          223 GCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKM---PEHSTLMKDFRRNTYTNCSLIKYM  299 (405)
T ss_dssp             HHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGS---TTHHHHHHHCCGGGGTTCCHHHHH
T ss_pred             HHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcC---cchhhhhhhccccCCCcchhhhhH
Confidence            99999999999999865432   112246889999999999987766443222   100000000000000001111111


Q ss_pred             HHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          213 AKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       213 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ..   .....+.++.+||.+||++||++|||++|+|+||||++
T Consensus       300 ~~---~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~  339 (405)
T 3rgf_A          300 EK---HKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE  339 (405)
T ss_dssp             HT---TTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTS
T ss_pred             hh---cCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhcc
Confidence            11   11223567889999999999999999999999999974


No 42 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.6e-34  Score=240.95  Aligned_cols=198  Identities=18%  Similarity=0.302  Sum_probs=152.0

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+|+.+.|+||++   +.+++...+.. +.++++.......  ....+.+++..++.++.|++.|| |||     
T Consensus        61 ~~~E~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iv  136 (326)
T 2y0a_A           61 IEREVSILKEIQHPNVIT---LHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA  136 (326)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhCCCCCCCc---EEEEEEeCCEE-EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            346999999999999999   88888776653 4455554432221  22345799999999999999999 998     


Q ss_pred             ------CCceeeCCCC----cEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCC
Q psy323           79 ------EELLYPTQNI----EIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY  147 (255)
Q Consensus        79 ------~niLl~~~~~----~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~  147 (255)
                            +|||+. .++    .+||+|||+++...........++ +.|+|||++.+..++.++||||+||++++|++|..
T Consensus       137 H~Dlkp~NIll~-~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  215 (326)
T 2y0a_A          137 HFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS  215 (326)
T ss_dssp             CCCCCGGGEEES-CSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCHHHEEEe-cCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcC
Confidence                  788884 544    799999999988765445555667 99999999998899999999999999999999999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+..      ..+.+..+.......+...+                                        ...+..+.
T Consensus       216 pf~~~~------~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~  249 (326)
T 2y0a_A          216 PFLGDT------KQETLANVSAVNYEFEDEYF----------------------------------------SNTSALAK  249 (326)
T ss_dssp             SSCCSS------HHHHHHHHHHTCCCCCHHHH----------------------------------------TTSCHHHH
T ss_pred             CCCCCC------HHHHHHHHHhcCCCcCcccc----------------------------------------ccCCHHHH
Confidence            998653      33344433332222111110                                        23457889


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||.+||+.||++|||++++++||||++
T Consensus       250 ~li~~~L~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          250 DFIRRLLVKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             HHHHHHccCChhhCCCHHHHhcCCCccC
Confidence            9999999999999999999999999974


No 43 
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=1.8e-34  Score=246.22  Aligned_cols=225  Identities=19%  Similarity=0.306  Sum_probs=163.1

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhh----hhhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKK----LLLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+|+++++.+.|+||++   +.+++....    ..++.++++...........+.+++..++.++.|++.|| |||    
T Consensus        73 ~~E~~~l~~l~h~niv~---~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  149 (364)
T 3qyz_A           73 LREIKILLRFRHENIIG---INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV  149 (364)
T ss_dssp             HHHHHHHHHCCCTTBCC---CCEEECCSSTTTCCCEEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHhcCCCCCcc---ceeEEecCCccccceEEEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            46999999999999999   877776543    112344444433223333446799999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcc----cccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHHhhC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETI----CREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~----~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l~~g  145 (255)
                             +|||+ +.++.+||+|||+++.......    ....++ +.|+|||++.+. .++.++||||+||++++|++|
T Consensus       150 vH~Dikp~NIl~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  228 (364)
T 3qyz_A          150 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN  228 (364)
T ss_dssp             ECCCCCGGGEEE-CTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHS
T ss_pred             ecCCCChHhEEE-CCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHC
Confidence                   78999 5888999999999987765322    233456 999999998765 689999999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      ++||.+.+      ..+.+..+...++.++.+.+......+ ...+...    ...... .+...       .....+.+
T Consensus       229 ~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~-~~~~~-------~~~~~~~~  289 (364)
T 3qyz_A          229 RPIFPGKH------YLDQLNHILGILGSPSQEDLNCIINLK-ARNYLLS----LPHKNK-VPWNR-------LFPNADSK  289 (364)
T ss_dssp             SCSSCCSS------GGGHHHHHHHHHCSCCHHHHHTCCCHH-HHHHHHT----SCCCCC-CCHHH-------HCTTSCHH
T ss_pred             CCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhhhhh-HHHHHHh----cCCccC-CCHHH-------hCCCCCHH
Confidence            99998765      677888999999998877653221110 0000000    000000 00000       11245678


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+||.+||++||++|||++++++||||++
T Consensus       290 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  319 (364)
T 3qyz_A          290 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  319 (364)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcCcchhh
Confidence            999999999999999999999999999974


No 44 
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=1.2e-33  Score=240.47  Aligned_cols=225  Identities=14%  Similarity=0.241  Sum_probs=164.3

Q ss_pred             hhHHHhhhhhhHHHHHHHHHHHHhhhhh------hhhhhcCCCCCCCCc-----ccccCCCCHHHHHHHHHHHHHhh-cc
Q psy323           10 DVKVMENMFVDAIIARIWIKAVMKKKKL------LLKEILPIQPPHQHK-----NLTRSSFSLTTFSKYVKQISQFV-YM   77 (255)
Q Consensus        10 e~~~l~~~~h~~iv~~~~l~~~~~~~~~------~~~~~~~~~~~l~~~-----~~~~~~l~~~~~~~~~~qll~~l-yl   77 (255)
                      +.+.++.+.|+||++   +.+++...+.      .++.++++.......     ......+++..++.++.|++.|| ||
T Consensus        69 ~~~~l~~l~h~niv~---~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l  145 (360)
T 3e3p_A           69 IMQDLAVLHHPNIVQ---LQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCL  145 (360)
T ss_dssp             HHHHHHHHCCTTBCC---EEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCccc---HHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            555667789999999   8777754221      124444554432211     12345799999999999999999 88


Q ss_pred             C-------------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHH
Q psy323           78 N-------------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFEL  142 (255)
Q Consensus        78 H-------------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l  142 (255)
                      |             +|||+...++.+||+|||+++............+ +.|+|||++.+. .++.++||||+||++|+|
T Consensus       146 H~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el  225 (360)
T 3e3p_A          146 HLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEM  225 (360)
T ss_dssp             TSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             hCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHH
Confidence            8             5899964588999999999998776545555566 999999999876 589999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhh
Q psy323          143 VTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKED  222 (255)
Q Consensus       143 ~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (255)
                      ++|+.||.+.+      ....+..+....+.++.+.+........-..++...+         .+....+.   ..+...
T Consensus       226 l~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~  287 (360)
T 3e3p_A          226 MLGEPIFRGDN------SAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKG---------IPWSNVFS---DHSLKD  287 (360)
T ss_dssp             HHSSCSSCCSS------HHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCC---------CCHHHHTT---TCCCTT
T ss_pred             HhCCCCcCCCC------hHHHHHHHHHHcCCCCHHHHHhcccchhhcccccccc---------CCcccccc---hhhccc
Confidence            99999998765      6678888999999998887654433211111111111         11111111   122346


Q ss_pred             HHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          223 AKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       223 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.++.+|+.+||++||.+|||+.|+++||||++
T Consensus       288 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  320 (360)
T 3e3p_A          288 AKEAYDLLSALLQYLPEERMKPYEALCHPYFDE  320 (360)
T ss_dssp             HHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGG
T ss_pred             cHHHHHHHHHHhccCccccCCHHHHhcCccccc
Confidence            789999999999999999999999999999974


No 45 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=4e-33  Score=237.31  Aligned_cols=234  Identities=20%  Similarity=0.337  Sum_probs=163.6

Q ss_pred             CchhHHHhhhh-----hhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc---cCCCCHHHHHHHHHHHHHhh-ccC
Q psy323            8 NPDVKVMENMF-----VDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT---RSSFSLTTFSKYVKQISQFV-YMN   78 (255)
Q Consensus         8 ~~e~~~l~~~~-----h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~l~~~~~~~~~~qll~~l-ylH   78 (255)
                      ..|+.+++.+.     |+||++   +.+++...+.. +.++++........+.   ...+++..++.++.|++.|| |||
T Consensus        79 ~~e~~~l~~l~~~~~~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH  154 (360)
T 3llt_A           79 KIEADILKKIQNDDINNNNIVK---YHGKFMYYDHM-CLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR  154 (360)
T ss_dssp             HHHHHHHHHTCCCSTTGGGBCC---EEEEEEETTEE-EEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccCCCCCCeec---ccceeeECCee-EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34888899886     999999   88877766553 4444444222211111   23599999999999999999 998


Q ss_pred             -----------CCceeeC------------------------CCCcEEEeecCccccCCCCcccccccc-ccccchhhhh
Q psy323           79 -----------EELLYPT------------------------QNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIY  122 (255)
Q Consensus        79 -----------~niLl~~------------------------~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~  122 (255)
                                 +|||+.+                        .++.+||+|||+|+....  ......+ +.|+|||++.
T Consensus       155 ~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~  232 (360)
T 3llt_A          155 KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVIL  232 (360)
T ss_dssp             HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHT
T ss_pred             HCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHc
Confidence                       7999952                        378899999999987655  3344556 9999999999


Q ss_pred             cCCCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccc--cc
Q psy323          123 TKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHN--IT  200 (255)
Q Consensus       123 ~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  200 (255)
                      +..++.++||||+||++|+|++|+.||.+.+      ..+.+..+....+.+|.......... +...++......  .+
T Consensus       233 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~p  305 (360)
T 3llt_A          233 NLGWDVSSDMWSFGCVLAELYTGSLLFRTHE------HMEHLAMMESIIQPIPKNMLYEATKT-NGSKYVNKDELKLAWP  305 (360)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHTCCCCHHHHHHHTTS-GGGGGEETTTTEECTT
T ss_pred             CCCCCCccchHHHHHHHHHHHHCCCCCCCCc------HHHHHHHHHHhcCCCCHHHHhhhhhc-cCccccCcccceecCc
Confidence            9999999999999999999999999998654      66788888888888887765443322 112222221111  11


Q ss_pred             cCCCCccHHHHHHHhcC-CChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          201 SMNAKDNFYRILAKSYK-IPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       201 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      ................. .+...+..+.+||.+||++||++|||++|+++||||+
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          306 ENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             TTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             ccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            10000001111110000 0112247888999999999999999999999999996


No 46 
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.2e-34  Score=244.15  Aligned_cols=220  Identities=15%  Similarity=0.264  Sum_probs=162.3

Q ss_pred             chhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            9 PDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      +|+++++.+.|+||++   +++++...+.. +.++++.........  ....+++..++.++.|++.|| |||       
T Consensus        61 ~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~  136 (346)
T 1ua2_A           61 REIKLLQELSHPNIIG---LLDAFGHKSNI-SLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR  136 (346)
T ss_dssp             HHHHHHHHCCCTTBCC---EEEEECCTTCC-EEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHhhCCCCCCCe---EEEEEeeCCce-EEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECC
Confidence            5999999999999999   88888766553 334444332111111  124589999999999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                          +||++ +.++.+||+|||+++..... ...+..++ +.|+|||++.+. .++.++||||+||++++|++|.+||.+
T Consensus       137 Dlkp~Nil~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~  215 (346)
T 1ua2_A          137 DLKPNNLLL-DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG  215 (346)
T ss_dssp             CCCGGGEEE-CTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCHHHEEE-cCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence                78898 58889999999999877542 23334455 999999999876 689999999999999999999999987


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      +.+.+..+....+.++...|......   ..+....     ..+. .+...       .....+.++.+||.
T Consensus       216 ~~------~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~-~~~~~-------~~~~~~~~~~~li~  273 (346)
T 1ua2_A          216 DS------DLDQLTRIFETLGTPTEEQWPDMCSL---PDYVTFK-----SFPG-IPLHH-------IFSAAGDDLLDLIQ  273 (346)
T ss_dssp             SS------HHHHHHHHHHHHCCCCTTTSSSTTSS---TTCCCCC-----CCCC-CCHHH-------HCTTCCHHHHHHHH
T ss_pred             CC------HHHHHHHHHHHcCCCChhhhhhhccC---ccccccc-----ccCC-CChHH-------hhccCCHHHHHHHH
Confidence            65      66788888888888876655432221   1111110     0100 11111       11345688999999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||+.||++|||++|+++||||++
T Consensus       274 ~~L~~dP~~Rpt~~ell~h~~f~~  297 (346)
T 1ua2_A          274 GLFLFNPCARITATQALKMKYFSN  297 (346)
T ss_dssp             HHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred             HHhccChhhCCCHHHHhcChhhhc
Confidence            999999999999999999999974


No 47 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=6.6e-34  Score=248.58  Aligned_cols=198  Identities=16%  Similarity=0.244  Sum_probs=152.9

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.||||++   +.+++...+.. +.++++..+..  ......+.+++..+..++.|++.|| |||     
T Consensus        57 ~~~E~~il~~l~hpnIv~---l~~~~~~~~~~-~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~giv  132 (444)
T 3soa_A           57 LEREARICRLLKHPNIVR---LHDSISEEGHH-YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV  132 (444)
T ss_dssp             HHHHHHHHHHCCBTTBCC---EEEEEECSSEE-EEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred             HHHHHHHHHhCCCcCCCe---EEEEEEECCEE-EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            346999999999999999   88888877664 55666654432  2333456799999999999999999 998     


Q ss_pred             ------CCceeeC--CCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 ------EELLYPT--QNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 ------~niLl~~--~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                            +|||+..  .++.+||+|||+++...... .....++ +.|+|||++.+..|+.++||||+||++|+|++|.+|
T Consensus       133 HrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~P  212 (444)
T 3soa_A          133 HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP  212 (444)
T ss_dssp             CCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCC
Confidence                  7999954  35789999999998776532 2344566 999999999998999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+.+      .......+.......+...                                        ....++++.+
T Consensus       213 f~~~~------~~~~~~~i~~~~~~~~~~~----------------------------------------~~~~s~~~~~  246 (444)
T 3soa_A          213 FWDED------QHRLYQQIKAGAYDFPSPE----------------------------------------WDTVTPEAKD  246 (444)
T ss_dssp             CCCSS------HHHHHHHHHHTCCCCCTTT----------------------------------------TTTSCHHHHH
T ss_pred             CCCcc------HHHHHHHHHhCCCCCCccc----------------------------------------cccCCHHHHH
Confidence            98543      3333333332211111100                                        0235678899


Q ss_pred             HHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      ||.+||+.||++|||+.|+++||||+
T Consensus       247 li~~~L~~dP~~Rpta~e~L~hp~~~  272 (444)
T 3soa_A          247 LINKMLTINPSKRITAAEALKHPWIS  272 (444)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHHSCTTH
T ss_pred             HHHHHcCCChhHCCCHHHHhcCcccc
Confidence            99999999999999999999999995


No 48 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=4.8e-34  Score=243.54  Aligned_cols=198  Identities=17%  Similarity=0.295  Sum_probs=151.4

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +++++...+.. +.++++.....  ......+.+++..+..++.|++.|| |||     
T Consensus        75 ~~~E~~il~~l~hpnIv~---~~~~~~~~~~~-~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv  150 (362)
T 2bdw_A           75 LEREARICRKLQHPNIVR---LHDSIQEESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV  150 (362)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred             HHHHHHHHHhCCCCCCCe---EEEEEEeCCEE-EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            346999999999999999   88888776663 55556554432  2223346799999999999999999 998     


Q ss_pred             ------CCceeeCC--CCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 ------EELLYPTQ--NIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 ------~niLl~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                            +|||+...  ++.+||+|||++............++ +.|+|||++.+..|+.++||||+||++|+|++|.+||
T Consensus       151 H~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf  230 (362)
T 2bdw_A          151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF  230 (362)
T ss_dssp             CCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             eccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence                  78999532  34699999999988776544555667 9999999999989999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+.+      .......+.......+...+                                        ...+.++.+|
T Consensus       231 ~~~~------~~~~~~~i~~~~~~~~~~~~----------------------------------------~~~~~~~~~l  264 (362)
T 2bdw_A          231 WDED------QHRLYAQIKAGAYDYPSPEW----------------------------------------DTVTPEAKSL  264 (362)
T ss_dssp             CCSS------HHHHHHHHHHTCCCCCTTGG----------------------------------------GGSCHHHHHH
T ss_pred             CCCC------HHHHHHHHHhCCCCCCcccc----------------------------------------cCCCHHHHHH
Confidence            8543      22233333221111111000                                        2346788999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      |.+||+.||++|||+.++++||||+
T Consensus       265 i~~~L~~dP~~R~t~~e~l~hp~~~  289 (362)
T 2bdw_A          265 IDSMLTVNPKKRITADQALKVPWIC  289 (362)
T ss_dssp             HHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred             HHHHcCCChhhCcCHHHHhcCcccC
Confidence            9999999999999999999999985


No 49 
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.98  E-value=2.9e-34  Score=245.65  Aligned_cols=229  Identities=17%  Similarity=0.281  Sum_probs=153.6

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhh-----hhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKL-----LLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.     .++.++++.... ........+++..+..++.|++.|| |||   
T Consensus        72 ~~E~~~l~~l~hpniv~---~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  147 (371)
T 2xrw_A           72 YRELVLMKCVNHKNIIG---LLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG  147 (371)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECSCCSTTTCCEEEEEEECCSEE-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCCCccc---eEEeeccccccccccceEEEEEcCCCC-HHHHHhhccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            35899999999999999   8887765541     123444443332 1222235699999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                              +|||+ +.++.+||+|||+++...........++ +.|+|||++.+..++.++||||+||++++|++|+.||
T Consensus       148 ivH~Dlkp~NIl~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf  226 (371)
T 2xrw_A          148 IIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF  226 (371)
T ss_dssp             CCCSCCCGGGEEE-CTTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             eecccCCHHHEEE-cCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence                    78999 5788999999999987765434445566 9999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcC-----CChhhHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYK-----IPKEDAK  224 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  224 (255)
                      .+.+      ..+++..+.+.++.++.+.+......  ...+.....    .... ....+.+.....     .+...+.
T Consensus       227 ~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  293 (371)
T 2xrw_A          227 PGTD------HIDQWNKVIEQLGTPCPEFMKKLQPT--VRTYVENRP----KYAG-YSFEKLFPDVLFPADSEHNKLKAS  293 (371)
T ss_dssp             CCSS------HHHHHHHHHC-CCCCCHHHHTTSCHH--HHHHHHSSC----CCCC-CCHHHHSCGGGSCCSSHHHHHHHH
T ss_pred             CCCC------HHHHHHHHHHHhCCCCHHHHHHhhhH--HHHHHhhCc----cccc-cchhhhcccccCcccccccccccH
Confidence            8765      66778888888888877665332211  011111000    0000 011110000000     0123467


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      ++.+||.+||+.||++|||++++++||||+
T Consensus       294 ~~~~li~~mL~~dP~~R~t~~e~l~hp~~~  323 (371)
T 2xrw_A          294 QARDLLSKMLVIDASKRISVDEALQHPYIN  323 (371)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHHHHHHHHCcCChhhCCCHHHHhCCcchh
Confidence            899999999999999999999999999986


No 50 
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.98  E-value=9.4e-34  Score=240.49  Aligned_cols=225  Identities=14%  Similarity=0.274  Sum_probs=160.5

Q ss_pred             chhHHHhhhhhhHHHHHHHHHHHHhhhhh-------hhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC
Q psy323            9 PDVKVMENMFVDAIIARIWIKAVMKKKKL-------LLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-------~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH   78 (255)
                      +|+.+++.+.|+||++   +.+++.....       .++.++++........  .....+++..++.++.|++.|| |||
T Consensus        65 ~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH  141 (351)
T 3mi9_A           65 REIKILQLLKHENVVN---LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH  141 (351)
T ss_dssp             HHHHHHHHCCCTTBCC---EEEEEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCccc---HhheeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            5999999999999999   8777665321       1233444433211111  1124699999999999999999 998


Q ss_pred             -----------CCceeeCCCCcEEEeecCccccCCCC-----cccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHH
Q psy323           79 -----------EELLYPTQNIEIVITDLEYVRPENDE-----TICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTF  140 (255)
Q Consensus        79 -----------~niLl~~~~~~~kl~DfG~a~~~~~~-----~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~  140 (255)
                                 +|||+ +.++.+||+|||+|+.....     .......+ +.|+|||++.+. .++.++||||+||+++
T Consensus       142 ~~~ivH~Dlkp~NIl~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~  220 (351)
T 3mi9_A          142 RNKILHRDMKAANVLI-TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA  220 (351)
T ss_dssp             HTTEECCCCSGGGEEE-CTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHH
T ss_pred             HCCeeCCCCCHHHEEE-cCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHH
Confidence                       78999 58889999999999876531     12334455 899999999875 6899999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCCh
Q psy323          141 ELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPK  220 (255)
Q Consensus       141 ~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (255)
                      +|++|.+||.+..      ..+.+..+....+.++...+......   .. +..  ........ ......+..     .
T Consensus       221 ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~---~~-~~~--~~~~~~~~-~~~~~~~~~-----~  282 (351)
T 3mi9_A          221 EMWTRSPIMQGNT------EQHQLALISQLCGSITPEVWPNVDNY---EL-YEK--LELVKGQK-RKVKDRLKA-----Y  282 (351)
T ss_dssp             HHHHSSCSCCCSS------HHHHHHHHHHHHCCCCTTTSTTGGGC---GG-GTS--SCCCSSCC-CCHHHHHHH-----H
T ss_pred             HHHhCCCCCCCCC------hHHHHHHHHHHhCCCChhhccccccc---hh-hcc--cccccccc-cCHHHHhhh-----c
Confidence            9999999998765      67788889999998887766543332   10 000  00000000 111121111     1


Q ss_pred             hhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          221 EDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       221 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ..++++.+||.+||+.||++|||++|+++||||++
T Consensus       283 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  317 (351)
T 3mi9_A          283 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  317 (351)
T ss_dssp             HCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGS
T ss_pred             cCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCC
Confidence            23577899999999999999999999999999964


No 51 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.98  E-value=1.1e-33  Score=234.96  Aligned_cols=195  Identities=16%  Similarity=0.216  Sum_probs=149.8

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC-cccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH-KNLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++...... .......+++..++.++.|++.|| |||       
T Consensus        65 ~~E~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~  140 (297)
T 3fxz_A           65 INEILVMRENKNPNIVN---YLDSYLVGDEL-WVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR  140 (297)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEEETTEE-EEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHHHhcCCCCCCCe---EeEEEEECCEE-EEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeC
Confidence            35899999999999999   88887766653 455555443322 223345799999999999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCCC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF  152 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~  152 (255)
                          +|||+ +.++.+||+|||++....... .....++ +.|+|||++.+..++.++||||+||++|+|++|..||.+.
T Consensus       141 Dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  219 (297)
T 3fxz_A          141 DIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE  219 (297)
T ss_dssp             CCSGGGEEE-CTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CCCHHHEEE-CCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                78999 588899999999998776532 2333456 9999999999999999999999999999999999999754


Q ss_pred             CCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHh
Q psy323          153 ESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIP  232 (255)
Q Consensus       153 ~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  232 (255)
                      +      ....+..+... +.+.                                        ...+...+..+.+|+.+
T Consensus       220 ~------~~~~~~~~~~~-~~~~----------------------------------------~~~~~~~~~~~~~li~~  252 (297)
T 3fxz_A          220 N------PLRALYLIATN-GTPE----------------------------------------LQNPEKLSAIFRDFLNR  252 (297)
T ss_dssp             C------HHHHHHHHHHH-CSCC----------------------------------------CSCGGGSCHHHHHHHHH
T ss_pred             C------HHHHHHHHHhC-CCCC----------------------------------------CCCccccCHHHHHHHHH
Confidence            3      22222222211 1110                                        00123456889999999


Q ss_pred             ccccCCCCCCCHHHHhcCcCCC
Q psy323          233 MLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       233 ~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      ||+.||++|||++++++||||+
T Consensus       253 ~l~~dp~~Rps~~ell~h~~~~  274 (297)
T 3fxz_A          253 CLEMDVEKRGSAKELLQHQFLK  274 (297)
T ss_dssp             HSCSSTTTSCCHHHHTTCGGGG
T ss_pred             HccCChhHCcCHHHHhhChhhc
Confidence            9999999999999999999996


No 52 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.98  E-value=5.4e-34  Score=241.73  Aligned_cols=193  Identities=21%  Similarity=0.334  Sum_probs=143.2

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC--cccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH--KNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+++|+.+.|+||++   +.+++...+.. +.++++......  .....+.+++..++.++.|++.|| |||      
T Consensus        56 ~~Ei~~l~~l~hpnIv~---l~~~~~~~~~~-~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH  131 (347)
T 3zgw_A           56 KTEIEALKNLRHQHICQ---LYHVLETANKI-FMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAH  131 (347)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEECSSEE-EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHHHhCCCCCEee---EEEEEEeCCEE-EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            45999999999999999   88888776663 455555544322  222346799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCc--ccccccc-ccccchhhhhcCCC-CCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDET--ICREDIH-RQYKAVELIYTKEF-DMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~--~~~~~~~-~~y~aPE~l~~~~~-~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                           +|||+ +.++.+||+|||+|.......  .....++ +.|+|||++.+..+ +.++||||+||++|+|++|..||
T Consensus       132 rDlkp~NIll-~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf  210 (347)
T 3zgw_A          132 RDLKPENLLF-DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF  210 (347)
T ss_dssp             CCCCGGGEEE-CTTSCEEECCCTTCBC--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCccHHHEEE-cCCCCEEEEeccCcccccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence                 78999 578999999999998765432  2334456 99999999998865 89999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+.+      .......+...                                            .+..+...++++.+|
T Consensus       211 ~~~~------~~~~~~~i~~~--------------------------------------------~~~~p~~~s~~~~~l  240 (347)
T 3zgw_A          211 DDDN------VMALYKKIMRG--------------------------------------------KYDVPKWLSPSSILL  240 (347)
T ss_dssp             CCSS------HHHHHHHHHHT--------------------------------------------CCCCCTTCCHHHHHH
T ss_pred             CCCC------HHHHHHHHHcC--------------------------------------------CCCCCCCCCHHHHHH
Confidence            8543      22222222211                                            111334456888999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+||+.||++|||++|+++||||++
T Consensus       241 i~~~L~~dP~~Rps~~eil~hp~~~~  266 (347)
T 3zgw_A          241 LQQMLQVDPKKRISMKNLLNHPWIMQ  266 (347)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTCHHHHT
T ss_pred             HHHHcccCHhHCcCHHHHhcCcchhc
Confidence            99999999999999999999999853


No 53 
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.98  E-value=9.5e-34  Score=242.43  Aligned_cols=222  Identities=19%  Similarity=0.334  Sum_probs=158.5

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhh-----hhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLL-----LKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+..     .+.++++... .........+++..++.++.|++.|| |||   
T Consensus        89 ~~E~~~l~~l~h~niv~---~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  164 (371)
T 4exu_A           89 YRELLLLKHMQHENVIG---LLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG  164 (371)
T ss_dssp             HHHHHHHHHCCCTTBCC---CSEEECSCSSSTTCCCCEEEEECCCE-EHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCCCchh---hhhheeccCCcccceeEEEEEccccc-cHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            35899999999999999   88888765532     1333333332 22223345699999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhc-CCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~-~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                              +|||+ +.++.+||+|||+++....  .....++ +.|+|||++.+ ..++.++||||+||++++|++|+.|
T Consensus       165 ivH~Dikp~NIll-~~~~~~kL~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p  241 (371)
T 4exu_A          165 VVHRDLKPGNLAV-NEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL  241 (371)
T ss_dssp             CCCSCCCGGGEEE-CTTCCEEECSTTCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CcCCCcCHHHeEE-CCCCCEEEEecCccccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCC
Confidence                    78999 5888999999999987655  3445566 99999999988 5889999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+.+      ..+.+..+....+.++.+++...... ....+...    +..... .....       .....+.++.+
T Consensus       242 f~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~-~~~~~-------~~~~~~~~~~~  302 (371)
T 4exu_A          242 FKGKD------YLDQLTQILKVTGVPGTEFVQKLNDK-AAKSYIQS----LPQTPR-KDFTQ-------LFPRASPQAAD  302 (371)
T ss_dssp             CCCSS------HHHHHHHHHHHHCCCCHHHHTTCSCH-HHHHHHHH----SCCCCC-CCHHH-------HSTTSCHHHHH
T ss_pred             CCCCC------hHHHHHHHHHHhCCCcHHHHHHhhhh-hhhhhhhc----cCCCcc-hhHHH-------hccccChHHHH
Confidence            98665      67788889999999887765332111 00000000    000000 00000       11245788999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ||.+||++||++|||++++++||||++
T Consensus       303 li~~~L~~dP~~Rpt~~ell~hp~f~~  329 (371)
T 4exu_A          303 LLEKMLELDVDKRLTAAQALTHPFFEP  329 (371)
T ss_dssp             HHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHCCCChhhcCCHHHHhcCccccc
Confidence            999999999999999999999999973


No 54 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.98  E-value=3.8e-34  Score=245.08  Aligned_cols=199  Identities=16%  Similarity=0.241  Sum_probs=153.3

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc-c--ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN-L--TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-~--~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+|+.+.|+||++   +++++...+.. +.++++........ +  ....+++..+..++.|++.|| |||    
T Consensus       133 ~~~E~~~l~~l~hpnIv~---~~~~~~~~~~~-~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  208 (373)
T 2x4f_A          133 VKNEISVMNQLDHANLIQ---LYDAFESKNDI-VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI  208 (373)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEECSSEE-EEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHhCCCCCCCe---EEEEEEECCEE-EEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            346999999999999999   88888776653 44455444322111 1  224599999999999999999 998    


Q ss_pred             -------CCceee-CCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 -------EELLYP-TQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 -------~niLl~-~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                             +|||+. +.++.+||+|||+++...........++ +.|+|||++.+..++.++||||+||++++|++|..||
T Consensus       209 vH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  288 (373)
T 2x4f_A          209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF  288 (373)
T ss_dssp             ECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCC
Confidence                   788885 3467899999999998776545555567 9999999999888999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+.+      +.+.+..+......++...                                        ....+.++.+|
T Consensus       289 ~~~~------~~~~~~~i~~~~~~~~~~~----------------------------------------~~~~~~~~~~l  322 (373)
T 2x4f_A          289 LGDN------DAETLNNILACRWDLEDEE----------------------------------------FQDISEEAKEF  322 (373)
T ss_dssp             CCSS------HHHHHHHHHHTCCCSCSGG----------------------------------------GTTSCHHHHHH
T ss_pred             CCCC------HHHHHHHHHhccCCCChhh----------------------------------------hccCCHHHHHH
Confidence            8654      4445555543322211110                                        02346788999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      |.+||+.||++|||++++++||||++
T Consensus       323 i~~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          323 ISKLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             HHHHcCCChhhCCCHHHHhcCcCcCC
Confidence            99999999999999999999999964


No 55 
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.98  E-value=2.7e-33  Score=240.45  Aligned_cols=188  Identities=20%  Similarity=0.361  Sum_probs=138.4

Q ss_pred             CCCCHHHHHHHHHHHHHhh-ccC-------------CCceeeC-CCCcEEEeecCccccCCCCcccccccc-ccccchhh
Q psy323           57 SSFSLTTFSKYVKQISQFV-YMN-------------EELLYPT-QNIEIVITDLEYVRPENDETICREDIH-RQYKAVEL  120 (255)
Q Consensus        57 ~~l~~~~~~~~~~qll~~l-ylH-------------~niLl~~-~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~  120 (255)
                      +.+++..++.++.|++.|| |||             +|||+.+ .++.+||+|||+|+....  .....++ +.|+|||+
T Consensus       152 ~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~  229 (382)
T 2vx3_A          152 RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQYIQSRFYRSPEV  229 (382)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc--ccccccCCccccChHH
Confidence            4599999999999999999 997             5888853 367899999999988765  3445566 99999999


Q ss_pred             hhcCCCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccc----
Q psy323          121 IYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQ----  196 (255)
Q Consensus       121 l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  196 (255)
                      +.+..++.++||||+||++++|++|++||.+.+      ..+.+..+.+..+.++...+......   ..++....    
T Consensus       230 ~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  300 (382)
T 2vx3_A          230 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN------EVDQMNKIVEVLGIPPAHILDQAPKA---RKFFEKLPDGTW  300 (382)
T ss_dssp             HTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHHCSCCHHHHTTCTTH---HHHEEECTTSCE
T ss_pred             HcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCHHHHHhhHHH---HHHHHhcccccc
Confidence            999999999999999999999999999998765      67888899999999988776443222   22222110    


Q ss_pred             ------ccccc-CCC-CccHHHHHHHhc-----------CCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          197 ------HNITS-MNA-KDNFYRILAKSY-----------KIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       197 ------~~~~~-~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                            ..... ..+ ...+...+....           ........++.+||.+||++||++|||++|+|+||||++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~  378 (382)
T 2vx3_A          301 NLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK  378 (382)
T ss_dssp             EECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC
T ss_pred             ccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCccccc
Confidence                  00000 000 011112111100           011234468999999999999999999999999999975


No 56 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.98  E-value=9.9e-34  Score=243.47  Aligned_cols=199  Identities=18%  Similarity=0.282  Sum_probs=151.0

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+|+.+.|+||++   +.+++...+.. +.++++.........   ....+++..++.++.|++.|| |||    
T Consensus        95 ~~~E~~il~~l~hpnIv~---~~~~~~~~~~~-~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  170 (387)
T 1kob_A           95 VKNEISIMNQLHHPKLIN---LHDAFEDKYEM-VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI  170 (387)
T ss_dssp             HHHHHHHHTTCCSTTBCC---EEEEEECSSEE-EEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHhCCCcCCCe---EEEEEEeCCEE-EEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            346999999999999999   88888776653 445555443322111   123699999999999999999 998    


Q ss_pred             -------CCceeeC-CCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 -------EELLYPT-QNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 -------~niLl~~-~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                             +|||+.. ..+.+||+|||+++...........++ +.|+|||++.+..++.++||||+||++|+|++|..||
T Consensus       171 vHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf  250 (387)
T 1kob_A          171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF  250 (387)
T ss_dssp             ECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred             eecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCC
Confidence                   7999953 357899999999998766444444566 9999999999989999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+.+      ..+.+..+.......+.                                        ......+.++.+|
T Consensus       251 ~~~~------~~~~~~~i~~~~~~~~~----------------------------------------~~~~~~s~~~~~l  284 (387)
T 1kob_A          251 AGED------DLETLQNVKRCDWEFDE----------------------------------------DAFSSVSPEAKDF  284 (387)
T ss_dssp             CCSS------HHHHHHHHHHCCCCCCS----------------------------------------STTTTSCHHHHHH
T ss_pred             CCCC------HHHHHHHHHhCCCCCCc----------------------------------------cccccCCHHHHHH
Confidence            8653      33333333221111000                                        0112456889999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      |.+||+.||++|||++++++||||++
T Consensus       285 i~~~L~~dP~~Rpt~~ell~hp~~~~  310 (387)
T 1kob_A          285 IKNLLQKEPRKRLTVHDALEHPWLKG  310 (387)
T ss_dssp             HHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             HHHHcCCChhHCcCHHHHhhCccccC
Confidence            99999999999999999999999973


No 57 
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.98  E-value=4.7e-33  Score=236.41  Aligned_cols=221  Identities=19%  Similarity=0.314  Sum_probs=158.2

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhh-----hhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLL-----LKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+..     .+.++++... .........+++..+..++.|++.|| |||   
T Consensus        71 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~  146 (353)
T 3coi_A           71 YRELLLLKHMQHENVIG---LLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG  146 (353)
T ss_dssp             HHHHHHHHHCCCTTBCC---CSEEECSCSSGGGCCCCEEEEECCSE-EGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCCCccc---HhheEecccccccceeEEEEeccccC-CHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            35899999999999999   88887765431     1333333332 22223345699999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhc-CCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~-~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                              +||++ +.++.+||+|||+++....  ..+...+ +.|+|||++.+ ..++.++||||+||++++|++|+.|
T Consensus       147 ivH~dlkp~NIl~-~~~~~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p  223 (353)
T 3coi_A          147 VVHRDLKPGNLAV-NEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL  223 (353)
T ss_dssp             CCCSSCCGGGEEE-CTTCCEEECSTTCTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             cccCCCCHHHEeE-CCCCcEEEeecccccCCCC--CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                    78888 5788999999999987654  3344556 99999999988 4789999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccc-cccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQ-HNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      |.+.+      ..+.+..+....|.++.+++...... ....++.... .....+.             ......+.++.
T Consensus       224 f~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~  283 (353)
T 3coi_A          224 FKGKD------YLDQLTQILKVTGVPGTEFVQKLNDK-AAKSYIQSLPQTPRKDFT-------------QLFPRASPQAA  283 (353)
T ss_dssp             SBSSC------HHHHHHHHHHHHCBCCHHHHTTCSCH-HHHHHHHTSCBCSSCCTT-------------TTCTTSCHHHH
T ss_pred             CCCCC------HHHHHHHHHHHhCCCCHHHHHHHhhH-HHHHHHHhCcCCCCccHH-------------HhcCCcCHHHH
Confidence            98665      56788889999998887765322111 0000110000 0000000             02235678999


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||.+||+.||++|||++++++||||+.
T Consensus       284 ~li~~~L~~dp~~Rpt~~e~l~hp~f~~  311 (353)
T 3coi_A          284 DLLEKMLELDVDKRLTAAQALTHPFFEP  311 (353)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            9999999999999999999999999973


No 58 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.98  E-value=2.5e-33  Score=236.85  Aligned_cols=193  Identities=16%  Similarity=0.282  Sum_probs=149.7

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|..+|+.+.|+||++   +..++...+.+ +.++++.......  ....+.+++..++.++.|++.|| |||      
T Consensus        53 ~~E~~~l~~l~hp~iv~---l~~~~~~~~~~-~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH  128 (337)
T 1o6l_A           53 VTESRVLQNTRHPFLTA---LKYAFQTHDRL-CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY  128 (337)
T ss_dssp             HHHHHHHHSCCCTTBCC---EEEEEECSSEE-EEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHHHhCCCCcCcc---eEEEEEeCCEE-EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            35889999999999999   88888776663 5556665443322  22346799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCC-Ccccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPEND-ETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~-~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.+|.+||+|||+|+.... .......++ +.|+|||++.+..++.++|+||+||++|+|++|..||.+
T Consensus       129 rDlkp~NIll-~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  207 (337)
T 1o6l_A          129 RDIKLENLML-DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  207 (337)
T ss_dssp             CCCCGGGEEE-CTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CcCCHHHEEE-CCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC
Confidence                 78999 5889999999999986433 223444556 999999999998999999999999999999999999975


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      .......+..  +                                          ....+...+.++.+||.
T Consensus       208 ~~------~~~~~~~i~~--~------------------------------------------~~~~p~~~s~~~~~li~  237 (337)
T 1o6l_A          208 QD------HERLFELILM--E------------------------------------------EIRFPRTLSPEAKSLLA  237 (337)
T ss_dssp             SS------HHHHHHHHHH--C------------------------------------------CCCCCTTSCHHHHHHHH
T ss_pred             CC------HHHHHHHHHc--C------------------------------------------CCCCCCCCCHHHHHHHH
Confidence            43      2222222211  0                                          01133456788999999


Q ss_pred             hccccCCCCCC-----CHHHHhcCcCCCC
Q psy323          232 PMLRLNPNKRE-----TAEQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~-----t~~e~l~hp~~~~  255 (255)
                      +||+.||++|+     +++++++||||++
T Consensus       238 ~lL~~dP~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          238 GLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             HHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence            99999999999     8999999999974


No 59 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.97  E-value=2.7e-33  Score=234.87  Aligned_cols=191  Identities=18%  Similarity=0.267  Sum_probs=150.6

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|..+++.+.|+||++   +.+++...+.+ +.++++........  ...+.+++..++.++.|++.|| |||      
T Consensus        54 ~~E~~~l~~l~hp~Iv~---~~~~~~~~~~~-~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH  129 (318)
T 1fot_A           54 NDERLMLSIVTHPFIIR---MWGTFQDAQQI-FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIY  129 (318)
T ss_dssp             HHHHHHHHSCCBTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred             HHHHHHHhhCCCCCCce---EeEEEEeCCEE-EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            35889999999999999   88888776653 56666655433222  2245799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF  152 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~  152 (255)
                           +|||+ +.+|.+||+|||+++....  .....++ +.|+|||++.+..++.++|+||+||++|+|++|..||.+.
T Consensus       130 rDlkp~NIll-~~~g~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  206 (318)
T 1fot_A          130 RDLKPENILL-DKNGHIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS  206 (318)
T ss_dssp             CCCCGGGEEE-CTTSCEEECCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             cCCChheEEE-cCCCCEEEeecCcceecCC--ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence                 68888 5889999999999987655  3334566 9999999999989999999999999999999999999754


Q ss_pred             CCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHh
Q psy323          153 ESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIP  232 (255)
Q Consensus       153 ~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  232 (255)
                      +      .......+...                                            ....+...+.++.+++.+
T Consensus       207 ~------~~~~~~~i~~~--------------------------------------------~~~~p~~~~~~~~~li~~  236 (318)
T 1fot_A          207 N------TMKTYEKILNA--------------------------------------------ELRFPPFFNEDVKDLLSR  236 (318)
T ss_dssp             S------HHHHHHHHHHC--------------------------------------------CCCCCTTSCHHHHHHHHH
T ss_pred             C------HHHHHHHHHhC--------------------------------------------CCCCCCCCCHHHHHHHHH
Confidence            3      22233333221                                            011234556889999999


Q ss_pred             ccccCCCCCC-----CHHHHhcCcCCCC
Q psy323          233 MLRLNPNKRE-----TAEQCLQNEWLIK  255 (255)
Q Consensus       233 ~L~~dP~~R~-----t~~e~l~hp~~~~  255 (255)
                      ||+.||++|+     +++++++||||++
T Consensus       237 lL~~dp~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          237 LITRDLSQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             HTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             HhccCHHHcCCCcCCCHHHHhcCccccC
Confidence            9999999999     8999999999974


No 60 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.97  E-value=6.5e-34  Score=240.30  Aligned_cols=193  Identities=17%  Similarity=0.290  Sum_probs=150.6

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCC-CCCcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPP-HQHKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++... +.......+.+++..++.++.|++.|| |||      
T Consensus        56 ~~~E~~~l~~l~hpnIv~---l~~~~~~~~~~-~lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH  131 (336)
T 3h4j_B           56 VEREISYLKLLRHPHIIK---LYDVITTPTDI-VMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVH  131 (336)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEECSSEE-EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHhCCCCCCCe---EEEEEEeCCEE-EEEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            456999999999999999   88888877663 445555432 222223346799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCC-CCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEF-DMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~-~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.++.+||+|||++............++ +.|+|||++.+..+ ++++||||+||++|+|++|+.||.+
T Consensus       132 ~Dlkp~NIll-~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~  210 (336)
T 3h4j_B          132 RDLKPENLLL-DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD  210 (336)
T ss_dssp             CCCSTTTEEE-CTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred             cCCchhhEEE-cCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC
Confidence                 79999 5888999999999988776555566677 99999999998866 6899999999999999999999985


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .....                                  .+..    +...            .+..+...++++.+|+.
T Consensus       211 ~~~~~----------------------------------~~~~----i~~~------------~~~~p~~~s~~~~~li~  240 (336)
T 3h4j_B          211 EFIPN----------------------------------LFKK----VNSC------------VYVMPDFLSPGAQSLIR  240 (336)
T ss_dssp             SSSTT----------------------------------CBCC----CCSS------------CCCCCTTSCHHHHHHHH
T ss_pred             ccHHH----------------------------------HHHH----HHcC------------CCCCcccCCHHHHHHHH
Confidence            43111                                  0000    0000            00133456788999999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      +||+.||.+|||++|+++||||+
T Consensus       241 ~~L~~dP~~Rpt~~eil~hp~~~  263 (336)
T 3h4j_B          241 RMIVADPMQRITIQEIRRDPWFN  263 (336)
T ss_dssp             TTSCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHcCCChhHCcCHHHHHhChhhc
Confidence            99999999999999999999986


No 61 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.97  E-value=3.1e-33  Score=240.79  Aligned_cols=199  Identities=16%  Similarity=0.251  Sum_probs=149.1

Q ss_pred             chhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC--cccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            9 PDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH--KNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         9 ~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .|..+++.+ .|+||++   +..++...+.+ +.++++......  .....+.+++..++.++.|++.|| |||      
T Consensus       101 ~E~~il~~~~~hp~Iv~---l~~~~~~~~~~-~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH  176 (396)
T 4dc2_A          101 TEKHVFEQASNHPFLVG---LHSCFQTESRL-FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY  176 (396)
T ss_dssp             HHHHHHHHHTTCTTBCC---EEEEEECSSEE-EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHHhcCCCCCcCe---eEEEEEECCEE-EEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence            488888877 8999999   88888776653 555555544322  222346799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCC-CCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPEN-DETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~-~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.+|.+||+|||+|+... ........++ +.|+|||++.+..|+.++|+||+||++|+|++|++||.+
T Consensus       177 rDLKp~NILl-~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~  255 (396)
T 4dc2_A          177 RDLKLDNVLL-DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  255 (396)
T ss_dssp             CCCCGGGEEE-CTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred             ccCCHHHEEE-CCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence                 79999 588999999999998633 3334445566 999999999999999999999999999999999999975


Q ss_pred             CCCCCCC--ccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          152 FESKYYT--IDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       152 ~~~~~~~--~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .......  .....+..                                           .+.......|...+.++.+|
T Consensus       256 ~~~~~~~~~~~~~~~~~-------------------------------------------~i~~~~~~~p~~~s~~~~~l  292 (396)
T 4dc2_A          256 VGSSDNPDQNTEDYLFQ-------------------------------------------VILEKQIRIPRSLSVKAASV  292 (396)
T ss_dssp             TTC------CCHHHHHH-------------------------------------------HHHHCCCCCCTTSCHHHHHH
T ss_pred             cccccccchhhHHHHHH-------------------------------------------HHhccccCCCCcCCHHHHHH
Confidence            4321100  00111111                                           11111222445677899999


Q ss_pred             HHhccccCCCCCCCH------HHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRETA------EQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t~------~e~l~hp~~~~  255 (255)
                      |.+||+.||++|+++      +++++||||++
T Consensus       293 i~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~  324 (396)
T 4dc2_A          293 LKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  324 (396)
T ss_dssp             HHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred             HHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence            999999999999985      79999999974


No 62 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.97  E-value=3.3e-33  Score=233.10  Aligned_cols=223  Identities=15%  Similarity=0.262  Sum_probs=156.7

Q ss_pred             chhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            9 PDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      +|+.+++.+.|+||++   +.+++...+.. +.++++.......  ....+.+++..+..++.|++.|| |||       
T Consensus        51 ~E~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~  126 (311)
T 4agu_A           51 REIRMLKQLKHPNLVN---LLEVFRRKRRL-HLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHR  126 (311)
T ss_dssp             HHHHHHHHCCCTTBCC---EEEEEEETTEE-EEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHHHhCCCCCccc---hhheeecCCeE-EEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCC
Confidence            5899999999999999   88888776653 3444444332111  12245699999999999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                          +||++ +.++.+||+|||++....... ......+ +.|+|||++.+. .++.++||||+||++++|++|..||.+
T Consensus       127 dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  205 (311)
T 4agu_A          127 DVKPENILI-TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG  205 (311)
T ss_dssp             CCSGGGEEE-CTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCChhhEEE-cCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence                78898 578899999999998776432 2334455 899999999874 789999999999999999999999986


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      ..      ..+.+..+....+.............    .++....  ........+....       ....+.++.+|+.
T Consensus       206 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~-------~~~~~~~~~~li~  266 (311)
T 4agu_A          206 KS------DVDQLYLIRKTLGDLIPRHQQVFSTN----QYFSGVK--IPDPEDMEPLELK-------FPNISYPALGLLK  266 (311)
T ss_dssp             SS------HHHHHHHHHHHHCSCCHHHHHHHHTC----GGGTTCC--CCCCSSCCCHHHH-------CTTCCHHHHHHHH
T ss_pred             CC------HHHHHHHHHHHhcccccccccccccc----cccccCc--CCCccccchhhhh-------cccccHHHHHHHH
Confidence            65      66777778888877665443211111    1111111  1000000000000       0245678899999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||++||++|||++++++||||++
T Consensus       267 ~~L~~dP~~Rpt~~ell~hp~f~~  290 (311)
T 4agu_A          267 GCLHMDPTERLTCEQLLHHPYFEN  290 (311)
T ss_dssp             HHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHccCChhhcCCHHHHhcChHHHh
Confidence            999999999999999999999975


No 63 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.97  E-value=1.5e-33  Score=239.54  Aligned_cols=192  Identities=11%  Similarity=0.170  Sum_probs=146.2

Q ss_pred             chhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            9 PDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         9 ~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .|..+++.+ .|+||++   +..++...+.+ +.++++.......  ....+.+++..++.++.|++.|| |||      
T Consensus        72 ~E~~il~~~~~hp~Iv~---l~~~~~~~~~~-~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH  147 (353)
T 3txo_A           72 TEKRILSLARNHPFLTQ---LFCCFQTPDRL-FFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIY  147 (353)
T ss_dssp             HHHHHHHHTTTCTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHHhccCCCceee---EEEEEEeCCEE-EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            478888887 7999999   88888776663 5556655443322  22346799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.++.+||+|||+|+..... ......++ +.|+|||++.+..|+.++||||+||++|+|++|+.||.+
T Consensus       148 rDlkp~NILl-~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~  226 (353)
T 3txo_A          148 RDLKLDNVLL-DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA  226 (353)
T ss_dssp             CCCCGGGEEE-CTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCCHHHEEE-CCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC
Confidence                 79999 58899999999999864432 23334456 999999999998999999999999999999999999986


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      ..+....+...                                            ....+...+.++.+||.
T Consensus       227 ~~------~~~~~~~i~~~--------------------------------------------~~~~p~~~~~~~~~li~  256 (353)
T 3txo_A          227 EN------EDDLFEAILND--------------------------------------------EVVYPTWLHEDATGILK  256 (353)
T ss_dssp             SS------HHHHHHHHHHC--------------------------------------------CCCCCTTSCHHHHHHHH
T ss_pred             CC------HHHHHHHHHcC--------------------------------------------CCCCCCCCCHHHHHHHH
Confidence            54      33333333221                                            01123345678899999


Q ss_pred             hccccCCCCCCCH------HHHhcCcCCCC
Q psy323          232 PMLRLNPNKRETA------EQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~------~e~l~hp~~~~  255 (255)
                      +||+.||++|+++      +++++||||++
T Consensus       257 ~lL~~dP~~R~~~~~~~~~~~il~hp~f~~  286 (353)
T 3txo_A          257 SFMTKNPTMRLGSLTQGGEHAILRHPFFKE  286 (353)
T ss_dssp             HHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred             HHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence            9999999999998      89999999974


No 64 
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.97  E-value=2.6e-33  Score=232.42  Aligned_cols=222  Identities=16%  Similarity=0.278  Sum_probs=160.5

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc---ccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK---NLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.......   ......+++..++.++.|++.|| |||     
T Consensus        50 ~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  125 (299)
T 2r3i_A           50 IREISLLKELNHPNIVK---LLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL  125 (299)
T ss_dssp             HHHHHHHTTCCCTTBCC---EEEEEEETTEE-EEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHcCCCCeee---EEEEEecCCce-EEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            35899999999999999   88888766553 3344433221111   11124689999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCC-CCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKE-FDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~-~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                            +||++ +.++.+||+|||++....... ......+ +.|+|||++.+.. ++.++||||+||++++|++|+.||
T Consensus       126 H~dlkp~Nili-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf  204 (299)
T 2r3i_A          126 HRDLKPQNLLI-NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALF  204 (299)
T ss_dssp             CCCCCGGGEEE-CTTSCEEECSTTHHHHHCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCCCCHHHeEE-cCCCCEEECcchhhhhccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCC
Confidence                  68888 588899999999998765422 2333445 8999999998874 789999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+.+      ..+.+..+.+..+.++...+......   ..+..    .+..... .....       .....+.++.+|
T Consensus       205 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~-~~~~~-------~~~~~~~~~~~l  263 (299)
T 2r3i_A          205 PGDS------EIDQLFRIFRTLGTPDEVVWPGVTSM---PDYKP----SFPKWAR-QDFSK-------VVPPLDEDGRSL  263 (299)
T ss_dssp             CCSS------HHHHHHHHHHHHCCCCTTTSTTGGGS---TTCCT----TSCCCCC-CCHHH-------HSTTCCHHHHHH
T ss_pred             CCcc------HHHHHHHHHHHhCCCchhhhhHhhcC---cccch----hhhcccc-hhhHh-------hCCCCCHHHHHH
Confidence            8654      66778888888888776655432222   11100    0000000 00000       112356788999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+||+.||++|||++++++||||++
T Consensus       264 i~~~L~~dP~~Rpt~~~~l~hp~~~~  289 (299)
T 2r3i_A          264 LSQMLHYDPNKRISAKAALAHPFFQD  289 (299)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHhcCcCcccCCCHHHHhcChhhhc
Confidence            99999999999999999999999974


No 65 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.97  E-value=7.1e-33  Score=237.70  Aligned_cols=196  Identities=14%  Similarity=0.257  Sum_probs=151.6

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+.+|+.+.|+||++   +..++...+.+ +.++++..+....  ....+.+++..++.++.|++.|| |||      
T Consensus        63 ~~E~~il~~l~hp~Iv~---l~~~~~~~~~~-~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH  138 (384)
T 4fr4_A           63 FKELQIMQGLEHPFLVN---LWYSFQDEEDM-FMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIH  138 (384)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEECSSEE-EEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHhCCCCCCCc---EEEEEEeCCEE-EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence            35999999999999999   88888776664 5566665443222  22235799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhc---CCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT---KEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~---~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                           +|||+ +.+|.+||+|||+|+...........++ +.|+|||++.+   ..|+.++||||+||++|+|++|+.||
T Consensus       139 rDlkp~NIll-~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf  217 (384)
T 4fr4_A          139 RDMKPDNILL-DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY  217 (384)
T ss_dssp             CCCSGGGEEE-CTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccCcHHHeEE-CCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCC
Confidence                 78999 5889999999999998776555666677 99999999974   35889999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+....    ....+.....  ..                                         ....+...+.++.+|
T Consensus       218 ~~~~~~----~~~~~~~~~~--~~-----------------------------------------~~~~p~~~s~~~~~l  250 (384)
T 4fr4_A          218 HIRSST----SSKEIVHTFE--TT-----------------------------------------VVTYPSAWSQEMVSL  250 (384)
T ss_dssp             CCCTTS----CHHHHHHHHH--HC-----------------------------------------CCCCCTTSCHHHHHH
T ss_pred             CCCCCc----cHHHHHHHHh--hc-----------------------------------------ccCCCCcCCHHHHHH
Confidence            754422    1111111111  00                                         011334567889999


Q ss_pred             HHhccccCCCCCCC-HHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRET-AEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t-~~e~l~hp~~~~  255 (255)
                      |.+||+.||.+||+ ++++++||||++
T Consensus       251 i~~lL~~dP~~R~s~~~~l~~hp~f~~  277 (384)
T 4fr4_A          251 LKKLLEPNPDQRFSQLSDVQNFPYMND  277 (384)
T ss_dssp             HHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred             HHHHhcCCHhHhcccHHHHHcChhhhc
Confidence            99999999999998 899999999974


No 66 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.97  E-value=3.5e-33  Score=237.08  Aligned_cols=200  Identities=21%  Similarity=0.306  Sum_probs=138.0

Q ss_pred             CCCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC--cccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            6 PVNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH--KNLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         6 ~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+.+|+.+++.+.|+||++   +.+++...+.. +.++++......  .....+.+++.+++.++.|++.|| |||    
T Consensus        94 ~~~~E~~~l~~l~h~niv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  169 (349)
T 2w4o_A           94 IVRTEIGVLLRLSHPNIIK---LKEIFETPTEI-SLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI  169 (349)
T ss_dssp             -----CHHHHHCCCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCCCCCcc---eeeeEecCCeE-EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            4567999999999999999   88888776653 455555443222  222345699999999999999999 998    


Q ss_pred             -------CCceeeC--CCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 -------EELLYPT--QNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 -------~niLl~~--~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                             +|||+..  .++.+||+|||+++...........++ +.|+|||++.+..++.++||||+||++|+|++|..|
T Consensus       170 vH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  249 (349)
T 2w4o_A          170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP  249 (349)
T ss_dssp             CCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             EecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCC
Confidence                   7899952  378999999999987765434444556 999999999998999999999999999999999999


Q ss_pred             CCCCCCCCCCccHH-HHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          149 FNPFESKYYTIDEH-HILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       149 f~~~~~~~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      |.+..      ... ....+.......+.                           +             .....+.++.
T Consensus       250 f~~~~------~~~~~~~~i~~~~~~~~~---------------------------~-------------~~~~~~~~~~  283 (349)
T 2w4o_A          250 FYDER------GDQFMFRRILNCEYYFIS---------------------------P-------------WWDEVSLNAK  283 (349)
T ss_dssp             TCCTT------CHHHHHHHHHTTCCCCCT---------------------------T-------------TTTTSCHHHH
T ss_pred             CCCCc------ccHHHHHHHHhCCCccCC---------------------------c-------------hhhhCCHHHH
Confidence            97543      222 22222211100000                           0             1124567889


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||.+||+.||++|||+.++++||||++
T Consensus       284 ~li~~~L~~dP~~Rpt~~e~l~hp~~~~  311 (349)
T 2w4o_A          284 DLVRKLIVLDPKKRLTTFQALQHPWVTG  311 (349)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             HHHHHHccCChhhCcCHHHHhcCcccCC
Confidence            9999999999999999999999999974


No 67 
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97  E-value=2.5e-33  Score=236.73  Aligned_cols=188  Identities=15%  Similarity=0.268  Sum_probs=146.9

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCC---CCCcccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPP---HQHKNLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++...   +.........+++..++.++.|++.|| |||    
T Consensus        76 ~~~E~~~l~~l~h~~Iv~---~~~~~~~~~~~-~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  151 (335)
T 3dls_A           76 VTLEIAILSRVEHANIIK---VLDIFENQGFF-QLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDI  151 (335)
T ss_dssp             EEHHHHHHTTCCCTTBCC---EEEEEECSSEE-EEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHhCCCCCEee---EEEEEeeCCEE-EEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            445999999999999999   88888776663 344443322   222222335799999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCC-CCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEF-DMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~-~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                             +|||+ +.++.+||+|||+++...........++ +.|+|||++.+..+ +.++||||+||++|+|++|..||
T Consensus       152 vH~Dlkp~NIll-~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf  230 (335)
T 3dls_A          152 IHRDIKDENIVI-AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF  230 (335)
T ss_dssp             ECSCCSGGGEEE-CTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             EEeccCHHHEEE-cCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCch
Confidence                   78999 5789999999999988776545555567 99999999998876 78999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+...               ....                                         ....+...+.++.+|
T Consensus       231 ~~~~~---------------~~~~-----------------------------------------~~~~~~~~~~~l~~l  254 (335)
T 3dls_A          231 CELEE---------------TVEA-----------------------------------------AIHPPYLVSKELMSL  254 (335)
T ss_dssp             SSGGG---------------GTTT-----------------------------------------CCCCSSCCCHHHHHH
T ss_pred             hhHHH---------------HHhh-----------------------------------------ccCCCcccCHHHHHH
Confidence            73210               0000                                         000123356789999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+||+.||++|||++++++||||++
T Consensus       255 i~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          255 VSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             HHHHccCChhhCcCHHHHhcCccccC
Confidence            99999999999999999999999974


No 68 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.97  E-value=8.6e-33  Score=231.89  Aligned_cols=198  Identities=17%  Similarity=0.307  Sum_probs=151.4

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.......  ....+.+++..++.++.|++.|| |||     
T Consensus        62 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iv  137 (321)
T 2a2a_A           62 IEREVSILRQVLHHNVIT---LHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA  137 (321)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhCCCCCcce---EEEEEecCCEE-EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            446999999999999999   88888776653 4555555432222  22245689999999999999999 998     


Q ss_pred             ------CCceeeCCCC----cEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCC
Q psy323           79 ------EELLYPTQNI----EIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY  147 (255)
Q Consensus        79 ------~niLl~~~~~----~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~  147 (255)
                            +||++. .++    .+||+|||++.............+ +.|+|||++.+..++.++||||+||++++|++|..
T Consensus       138 H~dikp~NIl~~-~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  216 (321)
T 2a2a_A          138 HFDLKPENIMLL-DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS  216 (321)
T ss_dssp             CCCCSGGGEEES-CTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCChHHEEEe-cCCCCcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCC
Confidence                  688884 554    799999999988776544555566 99999999998899999999999999999999999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+..      ..+.+..+.......+...                                        ....+..+.
T Consensus       217 pf~~~~------~~~~~~~i~~~~~~~~~~~----------------------------------------~~~~~~~~~  250 (321)
T 2a2a_A          217 PFLGDT------KQETLANITSVSYDFDEEF----------------------------------------FSHTSELAK  250 (321)
T ss_dssp             SSCCSS------HHHHHHHHHTTCCCCCHHH----------------------------------------HTTCCHHHH
T ss_pred             CCCCCC------HHHHHHHHHhcccccChhh----------------------------------------hcccCHHHH
Confidence            998653      3333333322211111111                                        023457889


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +|+.+||+.||++|||++++++||||+.
T Consensus       251 ~li~~~l~~dp~~Rps~~e~l~hp~~~~  278 (321)
T 2a2a_A          251 DFIRKLLVKETRKRLTIQEALRHPWITP  278 (321)
T ss_dssp             HHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred             HHHHHHcCCChhhCcCHHHHhcCccccC
Confidence            9999999999999999999999999973


No 69 
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.97  E-value=1.6e-32  Score=230.33  Aligned_cols=218  Identities=15%  Similarity=0.243  Sum_probs=159.2

Q ss_pred             chhHHHhhh---hhhHHHHHHHHHHHHh-----hhhhhhhhhcCCCCCCCCcc---cccCCCCHHHHHHHHHHHHHhh-c
Q psy323            9 PDVKVMENM---FVDAIIARIWIKAVMK-----KKKLLLKEILPIQPPHQHKN---LTRSSFSLTTFSKYVKQISQFV-Y   76 (255)
Q Consensus         9 ~e~~~l~~~---~h~~iv~~~~l~~~~~-----~~~~~~~~~~~~~~~l~~~~---~~~~~l~~~~~~~~~~qll~~l-y   76 (255)
                      +|+.+++.+   .|+||++   +.+++.     .... ++.++++........   .....+++..++.++.|++.|| |
T Consensus        60 ~e~~~l~~l~~~~h~~i~~---~~~~~~~~~~~~~~~-~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~  135 (326)
T 1blx_A           60 REVAVLRHLETFEHPNVVR---LFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF  135 (326)
T ss_dssp             HHHHHHHHHHHTCCTTBCC---EEEEEEEEECSSEEE-EEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhccCCCCeEe---eeeeeeecccCCCce-EEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence            578888777   7999999   877765     2222 233444433211111   1224599999999999999999 9


Q ss_pred             cC-----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh
Q psy323           77 MN-----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT  144 (255)
Q Consensus        77 lH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~  144 (255)
                      ||           +||++ +.++.+||+|||+++............+ +.|+|||++.+..++.++||||+||++++|++
T Consensus       136 lH~~gi~H~dlkp~Nili-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  214 (326)
T 1blx_A          136 LHSHRVVHRDLKPQNILV-TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR  214 (326)
T ss_dssp             HHHTTCCCCCCCGGGEEE-CTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             HHHCCceeccCCHHHeEE-cCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHc
Confidence            98           68888 5788999999999987765444444556 89999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccc-cccccccCCCCccHHHHHHHhcCCChhhH
Q psy323          145 GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLER-DQHNITSMNAKDNFYRILAKSYKIPKEDA  223 (255)
Q Consensus       145 g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (255)
                      |+.||.+..      +.+.+..+....+.++...|.......  ...+.. .......                .....+
T Consensus       215 g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----------------~~~~~~  270 (326)
T 1blx_A          215 RKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEK----------------FVTDID  270 (326)
T ss_dssp             SSCSCCCSS------HHHHHHHHHHHHCCCCGGGSCTTCSSC--GGGSCCCCCCCGGG----------------TCCSCC
T ss_pred             CCCCCCCCC------HHHHHHHHHHHcCCCCcccCccccccc--hhhhcccCcchhhh----------------ccccCC
Confidence            999998654      667788888888887766543222110  000100 0011111                223456


Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          224 KQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       224 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ..+.+|+.+||+.||++|||+.++++||||++
T Consensus       271 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  302 (326)
T 1blx_A          271 ELGKDLLLKCLTFNPAKRISAYSALSHPYFQD  302 (326)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHhcCccccc
Confidence            88899999999999999999999999999974


No 70 
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97  E-value=4.4e-33  Score=237.25  Aligned_cols=227  Identities=16%  Similarity=0.289  Sum_probs=153.3

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhh----hhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC-
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKK----LLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN-   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~----~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH-   78 (255)
                      +.+|+.+++.+.|+||++   +.+++....    ..++.++++.........  ....+++..+..++.|++.|| ||| 
T Consensus        76 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  152 (362)
T 3pg1_A           76 VLREIRLLNHFHHPNILG---LRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE  152 (362)
T ss_dssp             HHHHHHHHHHCCCTTBCC---CSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCcCccc---eeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            346999999999999999   888774321    112344444333211111  224699999999999999999 998 


Q ss_pred             ----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhc-CCCCCchhHHHHHHHHHHHhhCC
Q psy323           79 ----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 ----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~-~~~~~~~DiwSlG~il~~l~~g~  146 (255)
                                +||++ +.++.+||+|||+++............+ +.|+|||++.+ ..++.++||||+||++++|++|+
T Consensus       153 ~~ivH~Dlkp~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~  231 (362)
T 3pg1_A          153 AGVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK  231 (362)
T ss_dssp             TTCCCCCCCGGGEEE-CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CcCEecCCChHHEEE-cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCC
Confidence                      78999 5788999999999987655444444556 89999999988 47899999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+..      ..+.+..+....+.++...+...... ....++..   ....... .....       .....++.+
T Consensus       232 ~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~-~~~~~-------~~~~~~~~~  293 (362)
T 3pg1_A          232 ALFRGST------FYNQLNKIVEVVGTPKIEDVVMFSSP-SARDYLRN---SLSNVPA-RAWTA-------VVPTADPVA  293 (362)
T ss_dssp             CSCCCSS------HHHHHHHHHHHHCCCCHHHHHHTSCH-HHHHHTTT---CCCCCCC-CCHHH-------HSTTSCHHH
T ss_pred             CCCCCCC------HHHHHHHHHHHcCCCChHHhhhccch-hhhHHHHh---hcccCCh-hhHHh-------hCCCCCHHH
Confidence            9998655      66788889999998876643221111 00111111   0111110 00000       113456789


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+||.+||+.||++|||++++++||||++
T Consensus       294 ~~li~~~L~~dP~~Rpt~~ell~hp~f~~  322 (362)
T 3pg1_A          294 LDLIAKMLEFNPQRRISTEQALRHPYFES  322 (362)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHhcCChhhCCCHHHHHcCchhhh
Confidence            99999999999999999999999999974


No 71 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.97  E-value=3.9e-33  Score=245.38  Aligned_cols=194  Identities=19%  Similarity=0.298  Sum_probs=151.1

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +++++...+.+ +.++++.....  ......+.+++..++.++.|++.|| |||     
T Consensus        63 ~~~Ei~~l~~l~HpnIv~---l~~~~~~~~~~-~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv  138 (476)
T 2y94_A           63 IRREIQNLKLFRHPHIIK---LYQVISTPSDI-FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVV  138 (476)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEECSSEE-EEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHHHhCCCCCCCc---EEEEEEECCEE-EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            456999999999999999   88888776653 45555544322  2222345799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCC-CCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEF-DMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~-~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                            +|||+ +.++.+||+|||+++...........++ +.|+|||++.+..+ +.++||||+||++|+|++|..||.
T Consensus       139 HrDLkp~NIll-~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~  217 (476)
T 2y94_A          139 HRDLKPENVLL-DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD  217 (476)
T ss_dssp             CSCCSGGGEEE-CTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccccHHHEEE-ecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCC
Confidence                  68888 5888999999999998776545556667 99999999998865 689999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +.+      .......+....                                            +..+...+.++.+||
T Consensus       218 ~~~------~~~~~~~i~~~~--------------------------------------------~~~p~~~s~~~~~Li  247 (476)
T 2y94_A          218 DDH------VPTLFKKICDGI--------------------------------------------FYTPQYLNPSVISLL  247 (476)
T ss_dssp             CSS------SHHHHHHHHTTC--------------------------------------------CCCCTTCCHHHHHHH
T ss_pred             CCC------HHHHHHHHhcCC--------------------------------------------cCCCccCCHHHHHHH
Confidence            543      222222222110                                            012234567889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+||+.||++|||++++++||||++
T Consensus       248 ~~~L~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          248 KHMLQVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             HHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred             HHHcCCCchhCcCHHHHHhCHHhhh
Confidence            9999999999999999999999863


No 72 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.97  E-value=7.5e-33  Score=235.08  Aligned_cols=191  Identities=18%  Similarity=0.240  Sum_probs=149.8

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|..+|+.+.|+||++   +..++...+.+ +.++++.......  ....+.+++..++.++.|++.|| |||      
T Consensus        89 ~~E~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH  164 (350)
T 1rdq_E           89 LNEKRILQAVNFPFLVK---LEFSFKDNSNL-YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY  164 (350)
T ss_dssp             HHHHHHHTTCCCTTBCC---EEEEEECSSEE-EEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHhCCCCCCCe---EEEEEEcCCEE-EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            34899999999999999   88877766653 5556655443222  22236799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF  152 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~  152 (255)
                           +|||+ +.+|.+||+|||+++....  .....++ +.|+|||++.+..++.++|+||+||++|+|++|..||.+.
T Consensus       165 rDlkp~NIll-~~~g~~kL~DFg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  241 (350)
T 1rdq_E          165 RDLKPENLLI-DQQGYIQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD  241 (350)
T ss_dssp             CCCSGGGEEE-CTTSCEEECCCTTCEECSS--CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccCccceEEE-CCCCCEEEcccccceeccC--CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC
Confidence                 78999 5889999999999987765  2334556 9999999999999999999999999999999999999854


Q ss_pred             CCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHh
Q psy323          153 ESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIP  232 (255)
Q Consensus       153 ~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  232 (255)
                      +      .......+...  .                                          ...+...+.++.++|.+
T Consensus       242 ~------~~~~~~~i~~~--~------------------------------------------~~~p~~~~~~~~~li~~  271 (350)
T 1rdq_E          242 Q------PIQIYEKIVSG--K------------------------------------------VRFPSHFSSDLKDLLRN  271 (350)
T ss_dssp             S------HHHHHHHHHHC--C------------------------------------------CCCCTTCCHHHHHHHHH
T ss_pred             C------HHHHHHHHHcC--C------------------------------------------CCCCCCCCHHHHHHHHH
Confidence            3      22222222221  1                                          11234566889999999


Q ss_pred             ccccCCCCCCC-----HHHHhcCcCCCC
Q psy323          233 MLRLNPNKRET-----AEQCLQNEWLIK  255 (255)
Q Consensus       233 ~L~~dP~~R~t-----~~e~l~hp~~~~  255 (255)
                      ||+.||.+||+     ++++++||||++
T Consensus       272 lL~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          272 LLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             HSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             HhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence            99999999998     999999999974


No 73 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.97  E-value=6.4e-33  Score=233.41  Aligned_cols=194  Identities=17%  Similarity=0.245  Sum_probs=144.2

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+|+.+.|+||++   +.+++...+.+ +.++++.....  ......+.+++..+..++.|++.|| |||     
T Consensus        68 ~~~E~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv  143 (327)
T 3a62_A           68 TKAERNILEEVKHPFIVD---LIYAFQTGGKL-YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII  143 (327)
T ss_dssp             ---HHHHHHHCCCTTBCC---EEEEEECSSCE-EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhCCCCCccc---eeEEEEcCCEE-EEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            456999999999999999   88888776653 45555544322  1122246799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                            +|||+ +.++.+||+|||+++..... ......++ +.|+|||++.+..++.++||||+||++|+|++|+.||.
T Consensus       144 H~Dlkp~Nill-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~  222 (327)
T 3a62_A          144 YRDLKPENIML-NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT  222 (327)
T ss_dssp             CCCCCTTTEEE-CTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccCCHHHeEE-CCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCC
Confidence                  79999 58899999999999865432 22334456 99999999999899999999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +.+      ....+..+....                                            ...+...+.++.+||
T Consensus       223 ~~~------~~~~~~~i~~~~--------------------------------------------~~~p~~~~~~~~~li  252 (327)
T 3a62_A          223 GEN------RKKTIDKILKCK--------------------------------------------LNLPPYLTQEARDLL  252 (327)
T ss_dssp             CSS------HHHHHHHHHHTC--------------------------------------------CCCCTTSCHHHHHHH
T ss_pred             CCC------HHHHHHHHHhCC--------------------------------------------CCCCCCCCHHHHHHH
Confidence            543      223333332210                                            112334568899999


Q ss_pred             HhccccCCCCCC-----CHHHHhcCcCCCC
Q psy323          231 IPMLRLNPNKRE-----TAEQCLQNEWLIK  255 (255)
Q Consensus       231 ~~~L~~dP~~R~-----t~~e~l~hp~~~~  255 (255)
                      .+||+.||++||     +++++++||||++
T Consensus       253 ~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          253 KKLLKRNAASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             HHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred             HHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence            999999999999     8899999999974


No 74 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.97  E-value=7.2e-33  Score=234.68  Aligned_cols=192  Identities=16%  Similarity=0.211  Sum_probs=148.1

Q ss_pred             chhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            9 PDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         9 ~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .|..+++.+ .|+||++   +..++...+.+ +.++++..+......  ..+.+++..++.++.|++.|| |||      
T Consensus        66 ~E~~il~~~~~hp~iv~---l~~~~~~~~~~-~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH  141 (345)
T 1xjd_A           66 VEKRVLSLAWEHPFLTH---MFCTFQTKENL-FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVY  141 (345)
T ss_dssp             HHHHHHHHHTTCTTBCC---EEEEEECSSEE-EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHHhcCCCCCCCc---EEEEEEeCCEE-EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            477888876 8999999   88888776653 556666554332222  236799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.+|.+||+|||+|+..... ......++ +.|+|||++.+..++.++|+||+||++|+|++|..||.+
T Consensus       142 rDlkp~NIll-~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  220 (345)
T 1xjd_A          142 RDLKLDNILL-DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG  220 (345)
T ss_dssp             CCCCGGGEEE-CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCChhhEEE-CCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC
Confidence                 78999 58899999999999865432 23344556 999999999999999999999999999999999999986


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      ..+....+..  +.+                                          ..+...+.++.+||.
T Consensus       221 ~~------~~~~~~~i~~--~~~------------------------------------------~~p~~~s~~~~~li~  250 (345)
T 1xjd_A          221 QD------EEELFHSIRM--DNP------------------------------------------FYPRWLEKEAKDLLV  250 (345)
T ss_dssp             SS------HHHHHHHHHH--CCC------------------------------------------CCCTTSCHHHHHHHH
T ss_pred             CC------HHHHHHHHHh--CCC------------------------------------------CCCcccCHHHHHHHH
Confidence            53      2222222221  100                                          122345688999999


Q ss_pred             hccccCCCCCCCHH-HHhcCcCCCC
Q psy323          232 PMLRLNPNKRETAE-QCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~~-e~l~hp~~~~  255 (255)
                      +||+.||++||++. ++++||||++
T Consensus       251 ~lL~~dp~~R~~~~~~i~~hp~f~~  275 (345)
T 1xjd_A          251 KLFVREPEKRLGVRGDIRQHPLFRE  275 (345)
T ss_dssp             HHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             HHhcCCHhHcCCChHHHHcCccccC
Confidence            99999999999998 9999999974


No 75 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.97  E-value=3.8e-33  Score=246.71  Aligned_cols=196  Identities=19%  Similarity=0.306  Sum_probs=149.4

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+++|+.+.||||++   +.+++...+.. +.++++.....  ......+.+++..++.++.|++.|| |||      
T Consensus        69 ~~E~~~l~~l~hpniv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH  144 (486)
T 3mwu_A           69 LREVELLKKLDHPNIMK---LFEILEDSSSF-YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH  144 (486)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHhCCCCCcCe---EEEEEEcCCEE-EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            45999999999999999   88888776664 55666654432  2223346799999999999999999 998      


Q ss_pred             -----CCceeeC--CCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -----EELLYPT--QNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -----~niLl~~--~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                           +|||+..  .++.+||+|||+++...........++ +.|+|||++.+ .|+.++||||+||++|+|++|.+||.
T Consensus       145 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  223 (486)
T 3mwu_A          145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFY  223 (486)
T ss_dssp             SCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence                 7999953  246799999999988776555566677 99999999976 48999999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +.+      ..+.+..+......++..                                        .....+.++.+||
T Consensus       224 ~~~------~~~~~~~i~~~~~~~~~~----------------------------------------~~~~~s~~~~~li  257 (486)
T 3mwu_A          224 GKN------EYDILKRVETGKYAFDLP----------------------------------------QWRTISDDAKDLI  257 (486)
T ss_dssp             CSS------HHHHHHHHHHTCCCSCSG----------------------------------------GGGGSCHHHHHHH
T ss_pred             CCC------HHHHHHHHHhCCCCCCCc----------------------------------------ccCCCCHHHHHHH
Confidence            654      333443333211111100                                        0024567889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+||+.||++|||+.++++||||+
T Consensus       258 ~~~L~~dp~~R~t~~~~l~hp~~~  281 (486)
T 3mwu_A          258 RKMLTFHPSLRITATQCLEHPWIQ  281 (486)
T ss_dssp             HHHTCSSTTTSCCHHHHHHCHHHH
T ss_pred             HHHcCCChhhCcCHHHHhcCHhhc
Confidence            999999999999999999999985


No 76 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.97  E-value=2.4e-33  Score=230.11  Aligned_cols=194  Identities=19%  Similarity=0.302  Sum_probs=137.3

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCC-CCCcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPP-HQHKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++... +.......+.+++..++.++.|++.|| |||      
T Consensus        60 ~~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H  135 (275)
T 2eue_A           60 IEREISYLRLLRHPHIIK---LYDVIKSKDEI-IMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH  135 (275)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEECSSCE-EEEEECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHhCCCCCeEE---EEEEEecCCeE-EEEehhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Confidence            346899999999999999   88888766653 344444322 222223346799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCC-CCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEF-DMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~-~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +||++ +.++.+||+|||++.............+ +.|+|||++.+..+ +.++||||+||++++|++|+.||.+
T Consensus       136 ~dikp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  214 (275)
T 2eue_A          136 RDLKPENLLL-DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD  214 (275)
T ss_dssp             CCCSGGGEEE-CTTSCEEECCSSCC---------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCChHhEEE-CCCCCEEEeecccceeccCcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence                 68999 5888999999999987766444445556 99999999998865 6899999999999999999999975


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      ..      .......+...                                            ....+...+.++.+|+.
T Consensus       215 ~~------~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~li~  244 (275)
T 2eue_A          215 ES------IPVLFKNISNG--------------------------------------------VYTLPKFLSPGAAGLIK  244 (275)
T ss_dssp             SS------HHHHHHHHHHT--------------------------------------------CCCCCTTSCHHHHHHHH
T ss_pred             CC------HHHHHHHHHhC--------------------------------------------CCCCCccCCHHHHHHHH
Confidence            43      11222211110                                            01133445688899999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||+.||++|||++|+++||||+.
T Consensus       245 ~~l~~dP~~Rps~~e~l~h~~f~~  268 (275)
T 2eue_A          245 RMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             HHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             HHhhcCHhHCCCHHHHhhCCeecc
Confidence            999999999999999999999973


No 77 
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.97  E-value=2.6e-33  Score=247.66  Aligned_cols=196  Identities=20%  Similarity=0.299  Sum_probs=152.0

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+.+++.+.||||++   +++++...+.. +.++++.....  ......+.+++..++.++.|++.|| |||      
T Consensus        74 ~~E~~~l~~l~hpniv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH  149 (484)
T 3nyv_A           74 LREVQLLKQLDHPNIMK---LYEFFEDKGYF-YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH  149 (484)
T ss_dssp             HHHHHHHTTCCCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHhCCCCCCCc---EEEEEEeCCEE-EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            35999999999999999   88888876664 55555554432  2233456799999999999999999 998      


Q ss_pred             -----CCceeeC--CCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -----EELLYPT--QNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -----~niLl~~--~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                           +|||+..  .++.+||+|||+++...........++ +.|+|||++.+ .|+.++||||+||++|+|++|.+||.
T Consensus       150 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  228 (484)
T 3nyv_A          150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN  228 (484)
T ss_dssp             SCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCC
Confidence                 7899952  467899999999988776545555667 99999999977 58999999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +.+      ..+.+..+......++..                                        .....+.++.+||
T Consensus       229 ~~~------~~~~~~~i~~~~~~~~~~----------------------------------------~~~~~s~~~~~li  262 (484)
T 3nyv_A          229 GAN------EYDILKKVEKGKYTFELP----------------------------------------QWKKVSESAKDLI  262 (484)
T ss_dssp             CSS------HHHHHHHHHHCCCCCCSG----------------------------------------GGGGSCHHHHHHH
T ss_pred             CCC------HHHHHHHHHcCCCCCCCc----------------------------------------ccccCCHHHHHHH
Confidence            654      333343333211111100                                        0024568889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+||+.||++|||++++++||||+
T Consensus       263 ~~~L~~dp~~R~s~~e~l~h~~~~  286 (484)
T 3nyv_A          263 RKMLTYVPSMRISARDALDHEWIQ  286 (484)
T ss_dssp             HHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred             HHHCCCChhHCcCHHHHhhChhhc
Confidence            999999999999999999999985


No 78 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.97  E-value=5.6e-33  Score=235.96  Aligned_cols=198  Identities=15%  Similarity=0.252  Sum_probs=147.3

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc------cccCCCCHHHHHHHHHHHHHhh-ccC-
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN------LTRSSFSLTTFSKYVKQISQFV-YMN-   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~l~~~~~~~~~~qll~~l-ylH-   78 (255)
                      +.+|+.+++.+.|+||++   +++++...+.+ +.++++........      .....+++..++.++.|++.|| ||| 
T Consensus        73 ~~~E~~~l~~l~hpnIv~---~~~~~~~~~~~-~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~  148 (351)
T 3c0i_A           73 LKREASICHMLKHPHIVE---LLETYSSDGML-YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD  148 (351)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEEETTEE-EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCc---EEEEEEeCCEE-EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            456999999999999999   88888776653 55555554332211      1123589999999999999999 998 


Q ss_pred             ----------CCceeeCC--CCcEEEeecCccccCCCCcc-cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh
Q psy323           79 ----------EELLYPTQ--NIEIVITDLEYVRPENDETI-CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT  144 (255)
Q Consensus        79 ----------~niLl~~~--~~~~kl~DfG~a~~~~~~~~-~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~  144 (255)
                                +|||+...  .+.+||+|||+++....... ....++ +.|+|||++.+..++.++||||+||++|+|++
T Consensus       149 ~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  228 (351)
T 3c0i_A          149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS  228 (351)
T ss_dssp             TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             CCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHH
Confidence                      78999532  23599999999988765332 334456 99999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHH
Q psy323          145 GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAK  224 (255)
Q Consensus       145 g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      |..||.+..       ......+.......+...+                                        ...+.
T Consensus       229 g~~pf~~~~-------~~~~~~i~~~~~~~~~~~~----------------------------------------~~~s~  261 (351)
T 3c0i_A          229 GCLPFYGTK-------ERLFEGIIKGKYKMNPRQW----------------------------------------SHISE  261 (351)
T ss_dssp             SSCSSCSSH-------HHHHHHHHHTCCCCCHHHH----------------------------------------TTSCH
T ss_pred             CCCCCCCcH-------HHHHHHHHcCCCCCCcccc----------------------------------------ccCCH
Confidence            999997531       2222222221111111000                                        13457


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ++.+||.+||+.||++|||+.++++||||++
T Consensus       262 ~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          262 SAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            8899999999999999999999999999863


No 79 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.97  E-value=1.1e-32  Score=231.54  Aligned_cols=198  Identities=14%  Similarity=0.193  Sum_probs=146.4

Q ss_pred             CCCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCC--CCcccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            6 PVNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPH--QHKNLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         6 ~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+.+|+.+++.+.|+||++   +++++...+.. +.++++....  .........+++..++.++.|++.|| |||    
T Consensus        51 ~~~~E~~~l~~l~hpnIv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~gi  126 (323)
T 3tki_A           51 NIKKEICINKMLNHENVVK---FYGHRREGNIQ-YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI  126 (323)
T ss_dssp             CHHHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHhCCCCCCCe---EEEEEecCCeE-EEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3456999999999999999   88887776653 4455554432  22222345699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCC---cccccccc-ccccchhhhhcCCC-CCchhHHHHHHHHHHHhhCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDE---TICREDIH-RQYKAVELIYTKEF-DMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~---~~~~~~~~-~~y~aPE~l~~~~~-~~~~DiwSlG~il~~l~~g~  146 (255)
                             +|||+ +.++.+||+|||+++.....   ......++ +.|+|||++.+..+ +.++||||+||++++|++|+
T Consensus       127 vH~Dlkp~NIll-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~  205 (323)
T 3tki_A          127 THRDIKPENLLL-DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE  205 (323)
T ss_dssp             ECSCCSGGGEEE-CTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             cccccchHHEEE-eCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCC
Confidence                   78999 58889999999999866432   12234456 99999999998865 67999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+.....     ........ .....                            +             .....+.++
T Consensus       206 ~pf~~~~~~~-----~~~~~~~~-~~~~~----------------------------~-------------~~~~~~~~~  238 (323)
T 3tki_A          206 LPWDQPSDSC-----QEYSDWKE-KKTYL----------------------------N-------------PWKKIDSAP  238 (323)
T ss_dssp             CSCSSSCTTS-----HHHHHHHT-TCTTS----------------------------T-------------TGGGSCHHH
T ss_pred             CCCCCCchHH-----HHHHHHhc-ccccC----------------------------C-------------ccccCCHHH
Confidence            9997544210     11111100 00000                            0             012456788


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+|+.+||+.||++|||++|+++||||++
T Consensus       239 ~~li~~~L~~dP~~R~t~~eil~h~~~~~  267 (323)
T 3tki_A          239 LALLHKILVENPSARITIPDIKKDRWYNK  267 (323)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             HHHHHHHccCChhhCcCHHHHhhChhhcc
Confidence            89999999999999999999999999974


No 80 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.97  E-value=1.4e-32  Score=228.25  Aligned_cols=197  Identities=16%  Similarity=0.222  Sum_probs=144.6

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhh-hhhhhhcCCCCCCC-CcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKK-LLLKEILPIQPPHQ-HKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~-~~~~~~~~~~~~l~-~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+++++.+.|+||++   +.+++.... ..++.++++..... ......+.+++..++.++.|++.|| |||     
T Consensus        83 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  159 (298)
T 2zv2_A           83 VYQEIAILKKLDHPNVVK---LVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKII  159 (298)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhCCCCCCCe---EEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            345999999999999999   888877532 22244444433322 2223446799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCC---CCCchhHHHHHHHHHHHhhCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKE---FDMKIDIWSTACLTFELVTGDY  147 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~---~~~~~DiwSlG~il~~l~~g~~  147 (255)
                            +|||+ +.++.+||+|||+++...... ......+ +.|+|||++.+..   ++.++||||+||++|+|++|+.
T Consensus       160 H~Dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~  238 (298)
T 2zv2_A          160 HRDIKPSNLLV-GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC  238 (298)
T ss_dssp             CCCCCGGGEEE-CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCCCHHHEEE-CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence                  68898 588899999999998776532 2334456 9999999998764   3678999999999999999999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+..      .......+.......+                                          .....+.++.
T Consensus       239 pf~~~~------~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~l~  270 (298)
T 2zv2_A          239 PFMDER------IMCLHSKIKSQALEFP------------------------------------------DQPDIAEDLK  270 (298)
T ss_dssp             SSCCSS------HHHHHHHHHHCCCCCC------------------------------------------SSSCCCHHHH
T ss_pred             CCCCcc------HHHHHHHHhcccCCCC------------------------------------------CccccCHHHH
Confidence            997542      1111111111000000                                          1123567889


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||.+||+.||++|||+.++++||||++
T Consensus       271 ~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          271 DLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             HHHHHHhhcChhhCCCHHHHhcCccccC
Confidence            9999999999999999999999999975


No 81 
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.97  E-value=1.3e-32  Score=245.87  Aligned_cols=197  Identities=16%  Similarity=0.246  Sum_probs=152.8

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc----ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL----TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+|+.+|+.+.|+||++   +..++...+.+ +.++++..+......    ....+++..++.|+.|++.|| |||    
T Consensus       232 ~~E~~iL~~l~hp~Iv~---l~~~~~~~~~l-~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI  307 (576)
T 2acx_A          232 LNEKQILEKVNSRFVVS---LAYAYETKDAL-CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI  307 (576)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHcCCCCEee---EEEEEeeCCEE-EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            35899999999999999   88888776654 566666554332211    123499999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                             +|||+ +.+|.+||+|||+|+...........++ +.|+|||++.+..|+.++||||+||++|+|++|++||.
T Consensus       308 vHrDLKPeNILl-d~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~  386 (576)
T 2acx_A          308 VYRDLKPENILL-DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ  386 (576)
T ss_dssp             ECCCCCGGGEEE-CTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSS
T ss_pred             eccCCchheEEE-eCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCc
Confidence                   79999 5889999999999988766545555677 99999999999889999999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +.....   ....+......  .+                                         ...+...+.++.+||
T Consensus       387 ~~~~~~---~~~~i~~~i~~--~~-----------------------------------------~~~p~~~s~~~~dLI  420 (576)
T 2acx_A          387 QRKKKI---KREEVERLVKE--VP-----------------------------------------EEYSERFSPQARSLC  420 (576)
T ss_dssp             CSSSCC---CHHHHHHHHHH--CC-----------------------------------------CCCCTTSCHHHHHHH
T ss_pred             ccccch---hHHHHHHHhhc--cc-----------------------------------------ccCCccCCHHHHHHH
Confidence            654211   12222221110  00                                         012245678899999


Q ss_pred             HhccccCCCCCC-----CHHHHhcCcCCCC
Q psy323          231 IPMLRLNPNKRE-----TAEQCLQNEWLIK  255 (255)
Q Consensus       231 ~~~L~~dP~~R~-----t~~e~l~hp~~~~  255 (255)
                      .+||+.||.+|+     +++|+++||||++
T Consensus       421 ~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          421 SQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             HHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             HHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            999999999999     7999999999974


No 82 
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.97  E-value=2.5e-32  Score=229.55  Aligned_cols=229  Identities=14%  Similarity=0.238  Sum_probs=155.3

Q ss_pred             CCchhHHHhhhh-hhHHHHHHHHHHHHhhhhh-hhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMF-VDAIIARIWIKAVMKKKKL-LLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~-h~~iv~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+. |+||++   +.+++..... ..+.++++.......... ..+++..++.++.|++.|| |||     
T Consensus        77 ~~~E~~~l~~l~~~~~i~~---~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iv  152 (330)
T 3nsz_A           77 IKREIKILENLRGGPNIIT---LADIVKDPVSRTPALVFEHVNNTDFKQLY-QTLTDYDIRFYMYEILKALDYCHSMGIM  152 (330)
T ss_dssp             HHHHHHHHHHHTTSTTBCC---EEEEEECTTTCCEEEEEECCCCCCHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHcCCCCCEEE---eeeeeccCCCCceEEEEeccCchhHHHHH-HhCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            346999999997 999999   8887776322 223444444433222222 3499999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhc-CCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT-KEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~-~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                            +|||+......+||+|||+++............+ +.|+|||++.+ ..++.++||||+||++++|++|..||.
T Consensus       153 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~  232 (330)
T 3nsz_A          153 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF  232 (330)
T ss_dssp             CCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred             eCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence                  7999954445899999999988766545555566 99999999988 478999999999999999999999995


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhh-hhhhhhh--cccccccccc-ccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNL-MDNERCI--RNIKVLLERD-QHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      ...     ...+++..+...++.+.... +......  .......... .........           ...+...+.++
T Consensus       233 ~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~  296 (330)
T 3nsz_A          233 HGH-----DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH-----------SENQHLVSPEA  296 (330)
T ss_dssp             CCS-----SHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCC-----------TTTGGGCCHHH
T ss_pred             cCC-----chHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhcc-----------ccccccCCHHH
Confidence            432     15566777766666432111 1100000  0000000000 000000000           00123367899


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+||.+||++||++|||++|+++||||++
T Consensus       297 ~~li~~~L~~dP~~Rpta~e~l~hp~f~~  325 (330)
T 3nsz_A          297 LDFLDKLLRYDHQSRLTAREAMEHPYFYT  325 (330)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHhcCCcccCCCHHHHhcCccHhh
Confidence            99999999999999999999999999975


No 83 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.97  E-value=3.3e-32  Score=230.75  Aligned_cols=200  Identities=16%  Similarity=0.257  Sum_probs=148.6

Q ss_pred             CchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|..+++.+ .|+||++   +.+++...+.+ +.++++.......  ....+.+++..++.++.|++.|| |||     
T Consensus        57 ~~E~~~l~~~~~hp~iv~---l~~~~~~~~~~-~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iv  132 (345)
T 3a8x_A           57 QTEKHVFEQASNHPFLVG---LHSCFQTESRL-FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGII  132 (345)
T ss_dssp             HHHHHHHHHTTTCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred             HHHHHHHHhcCCCCccCe---EEEEEEeCCEE-EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            3588888887 8999999   88888776654 5666665543322  22236799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCC-Ccccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPEND-ETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~-~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                            +|||+ +.++.+||+|||+|+.... .......++ +.|+|||++.+..++.++|+||+||++|+|++|+.||.
T Consensus       133 HrDlkp~NIll-~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~  211 (345)
T 3a8x_A          133 YRDLKLDNVLL-DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  211 (345)
T ss_dssp             CCCCCGGGEEE-CTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ecCCCHHHEEE-CCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcC
Confidence                  78999 5889999999999986433 223444566 99999999999999999999999999999999999997


Q ss_pred             CCCCCCCC--ccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          151 PFESKYYT--IDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       151 ~~~~~~~~--~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      +.......  .....+...                                           +.......+...+.++.+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~-------------------------------------------i~~~~~~~p~~~s~~~~~  248 (345)
T 3a8x_A          212 IVGSSDNPDQNTEDYLFQV-------------------------------------------ILEKQIRIPRSLSVKAAS  248 (345)
T ss_dssp             TTTC-------CHHHHHHH-------------------------------------------HHHCCCCCCTTSCHHHHH
T ss_pred             CcccccccccccHHHHHHH-------------------------------------------HHcCCCCCCCCCCHHHHH
Confidence            53211100  001111110                                           111111234556788999


Q ss_pred             HHHhccccCCCCCCCH------HHHhcCcCCCC
Q psy323          229 FLIPMLRLNPNKRETA------EQCLQNEWLIK  255 (255)
Q Consensus       229 li~~~L~~dP~~R~t~------~e~l~hp~~~~  255 (255)
                      ||.+||+.||.+||++      +++++||||++
T Consensus       249 li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~  281 (345)
T 3a8x_A          249 VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  281 (345)
T ss_dssp             HHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred             HHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence            9999999999999995      89999999974


No 84 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.97  E-value=1.1e-32  Score=241.33  Aligned_cols=194  Identities=17%  Similarity=0.266  Sum_probs=145.2

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC--cccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH--KNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||+.   +.+++...+.+ +.++++......  .....+.+++..++.++.|++.|| |||     
T Consensus       195 ~~~e~~~l~~l~h~~iv~---l~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~gi  270 (446)
T 4ejn_A          195 TLTENRVLQNSRHPFLTA---LKYSFQTHDRL-CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV  270 (446)
T ss_dssp             ------CCCCCSCTTSCC---EEEEEEETTEE-EEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHhCCCCeEee---EEEEEeeCCEE-EEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCE
Confidence            456899999999999999   88888777663 555665544322  222346799999999999999999 998     


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCC-Ccccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPEND-ETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~-~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                             +|||+ +.++.+||+|||+|+.... .......++ +.|+|||++.+..|+.++||||+||++++|++|+.||
T Consensus       271 iHrDlkp~NIll-~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  349 (446)
T 4ejn_A          271 VYRDLKLENLML-DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  349 (446)
T ss_dssp             CCCCCCGGGEEE-CSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             EECCCCHHHEEE-CCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCC
Confidence                   58888 5788999999999986443 223445566 9999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+.+      .......+...                                            ....+...++++.+|
T Consensus       350 ~~~~------~~~~~~~i~~~--------------------------------------------~~~~p~~~~~~~~~l  379 (446)
T 4ejn_A          350 YNQD------HEKLFELILME--------------------------------------------EIRFPRTLGPEAKSL  379 (446)
T ss_dssp             CCSS------HHHHHHHHHHC--------------------------------------------CCCCCTTSCHHHHHH
T ss_pred             CCCC------HHHHHHHHHhC--------------------------------------------CCCCCccCCHHHHHH
Confidence            7543      22222222110                                            011334566889999


Q ss_pred             HHhccccCCCCCC-----CHHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRE-----TAEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~-----t~~e~l~hp~~~~  255 (255)
                      |.+||+.||.+||     |++++++||||++
T Consensus       380 i~~~L~~dP~~R~~~~~~t~~ell~hp~f~~  410 (446)
T 4ejn_A          380 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG  410 (446)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence            9999999999999     9999999999974


No 85 
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.97  E-value=5e-33  Score=234.30  Aligned_cols=223  Identities=17%  Similarity=0.334  Sum_probs=156.4

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.......  ....+.+++..+..++.|++.|| |||      
T Consensus        72 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH  147 (331)
T 4aaa_A           72 MREIKLLKQLRHENLVN---LLEVCKKKKRW-YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIH  147 (331)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEEETTEE-EEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHhhCCCCCEee---EEEEeecCCEE-EEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence            35899999999999999   88888766653 4444444332211  12245699999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcC-CCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTK-EFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                           +||++ +.++.+||+|||+++..... .......+ +.|+|||++.+. .++.++||||+||++++|++|+.||.
T Consensus       148 ~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  226 (331)
T 4aaa_A          148 RDIKPENILV-SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFP  226 (331)
T ss_dssp             CCCCGGGEEE-CTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cCcChheEEE-cCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCC
Confidence                 78898 58889999999999876542 22334455 899999999886 78999999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +..      +.+.+..+....+.+++.........   . .+.  +...+......+...       .....+.++.+|+
T Consensus       227 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~--~~~~~~~~~~~~~~~-------~~~~~~~~l~~li  287 (331)
T 4aaa_A          227 GDS------DIDQLYHIMMCLGNLIPRHQELFNKN---P-VFA--GVRLPEIKEREPLER-------RYPKLSEVVIDLA  287 (331)
T ss_dssp             CSS------HHHHHHHHHHHHCSCCHHHHHHHHHC---G-GGT--TCCCCCCSSCCCHHH-------HSTTSCHHHHHHH
T ss_pred             CCC------cHHHHHHHHHHhCCCChhhhhHhhhc---c-ccc--cccCccccccchhhh-------cccchhHHHHHHH
Confidence            665      66777888888887665543221111   0 000  011111111111111       1124578899999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+||+.||++|||+.|+++||||+
T Consensus       288 ~~~L~~dP~~Rpt~~ell~hp~f~  311 (331)
T 4aaa_A          288 KKCLHIDPDKRPFCAELLHHDFFQ  311 (331)
T ss_dssp             HHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             HHHhccCcccCCCHHHHhcCchhc
Confidence            999999999999999999999996


No 86 
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.97  E-value=5.1e-32  Score=227.93  Aligned_cols=229  Identities=17%  Similarity=0.323  Sum_probs=158.5

Q ss_pred             CchhHHHhhhhhhH------HHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc---cCCCCHHHHHHHHHHHHHhh-cc
Q psy323            8 NPDVKVMENMFVDA------IIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT---RSSFSLTTFSKYVKQISQFV-YM   77 (255)
Q Consensus         8 ~~e~~~l~~~~h~~------iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~l~~~~~~~~~~qll~~l-yl   77 (255)
                      .+|+.+++.+.|++      ++.   +.+++...+.. +.++++........+.   ...+++..++.++.|++.|| ||
T Consensus        59 ~~e~~~l~~l~~~~~~~~~~i~~---~~~~~~~~~~~-~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l  134 (339)
T 1z57_A           59 RSEIQVLEHLNTTDPNSTFRCVQ---MLEWFEHHGHI-CIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL  134 (339)
T ss_dssp             HHHHHHHHHHHHHCTTCTTCBCC---EEEEEEETTEE-EEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCCCCceeeEe---eecccccCCcE-EEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHH
Confidence            35788888888876      555   55555554442 3344443221111111   13689999999999999999 99


Q ss_pred             C-----------CCceeeCC------------------CCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCC
Q psy323           78 N-----------EELLYPTQ------------------NIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFD  127 (255)
Q Consensus        78 H-----------~niLl~~~------------------~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~  127 (255)
                      |           +|||+...                  ++.+||+|||+++....  ......+ +.|+|||++.+..++
T Consensus       135 H~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~  212 (339)
T 1z57_A          135 HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWS  212 (339)
T ss_dssp             HHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCC
T ss_pred             HHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCC
Confidence            8           78998532                  56799999999987655  3344556 999999999998999


Q ss_pred             CchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCcc
Q psy323          128 MKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDN  207 (255)
Q Consensus       128 ~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (255)
                      .++||||+||++++|++|..||.+.+      ..+.+..+....+.+|..++......    .++..........   ..
T Consensus       213 ~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~---~~  279 (339)
T 1z57_A          213 QPCDVWSIGCILIEYYLGFTVFPTHD------SKEHLAMMERILGPLPKHMIQKTRKR----KYFHHDRLDWDEH---SS  279 (339)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSC------HHHHHHHHHHHHCSCCHHHHHHCSCG----GGEETTEECCCTT---SH
T ss_pred             cchhhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHhhccch----hHHhhcccccccc---cc
Confidence            99999999999999999999998654      56677788888898887766543322    1111100000000   00


Q ss_pred             HHHHHH-------HhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          208 FYRILA-------KSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       208 ~~~~~~-------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ..+...       .....+...+.++.+|+.+||+.||.+|||++|+++||||++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          280 AGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL  334 (339)
T ss_dssp             HHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             ccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence            000000       111123456789999999999999999999999999999974


No 87 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97  E-value=4.2e-33  Score=241.09  Aligned_cols=198  Identities=12%  Similarity=0.208  Sum_probs=151.9

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC-cccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH-KNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      +.+|+.+++.+.|+||++   +..++...+.+ +.++++..+... ..+....+++..++.++.|++.|| |||      
T Consensus       116 ~~~E~~il~~l~hp~Iv~---l~~~~~~~~~~-~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givH  191 (410)
T 3v8s_A          116 FWEERDIMAFANSPWVVQ---LFYAFQDDRYL-YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH  191 (410)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHhCCCCCCCe---EEEEEEECCEE-EEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            346999999999999999   88888876664 566666554322 223345799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCcc--cccccc-ccccchhhhhcCC----CCCchhHHHHHHHHHHHhhCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDETI--CREDIH-RQYKAVELIYTKE----FDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~~--~~~~~~-~~y~aPE~l~~~~----~~~~~DiwSlG~il~~l~~g~  146 (255)
                           +|||+ +.+|.+||+|||+|+.......  ....++ +.|+|||++.+.+    |+.++||||+||++|+|++|+
T Consensus       192 rDLKp~NILl-~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~  270 (410)
T 3v8s_A          192 RDVKPDNMLL-DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD  270 (410)
T ss_dssp             CCCSGGGEEE-CTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCHHHeeE-CCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCC
Confidence                 79999 5889999999999987765322  234556 9999999998775    789999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      +||.+.+      .......+.......          .                              +......+.++
T Consensus       271 ~Pf~~~~------~~~~~~~i~~~~~~~----------~------------------------------~p~~~~~s~~~  304 (410)
T 3v8s_A          271 TPFYADS------LVGTYSKIMNHKNSL----------T------------------------------FPDDNDISKEA  304 (410)
T ss_dssp             CTTCCSS------HHHHHHHHHTHHHHC----------C------------------------------CCTTCCCCHHH
T ss_pred             CCCCCCC------hhhHHHHHHhccccc----------c------------------------------CCCcccccHHH
Confidence            9998654      333334333211000          0                              00112456889


Q ss_pred             HHHHHhccccCCCC--CCCHHHHhcCcCCCC
Q psy323          227 VRFLIPMLRLNPNK--RETAEQCLQNEWLIK  255 (255)
Q Consensus       227 ~~li~~~L~~dP~~--R~t~~e~l~hp~~~~  255 (255)
                      .+||.+||+.+|.+  |++++|+++||||++
T Consensus       305 ~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~  335 (410)
T 3v8s_A          305 KNLICAFLTDREVRLGRNGVEEIKRHLFFKN  335 (410)
T ss_dssp             HHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred             HHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence            99999999999999  999999999999974


No 88 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.97  E-value=2.8e-32  Score=228.92  Aligned_cols=196  Identities=17%  Similarity=0.278  Sum_probs=148.3

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC-cccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH-KNLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++...... .......+++..+..++.|++.|| |||       
T Consensus        90 ~~E~~~l~~l~h~niv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~  165 (321)
T 2c30_A           90 FNEVVIMRDYQHFNVVE---MYKSYLVGEEL-WVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHR  165 (321)
T ss_dssp             HHHHHHHTTCCCTTBCC---EEEEEEETTEE-EEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHHHHhCCCCCcce---EEEEEEECCEE-EEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence            35899999999999999   88777766553 455555444322 223345799999999999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCCC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF  152 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~  152 (255)
                          +||++ +.++.+||+|||++....... ......+ +.|+|||++.+..++.++||||+||++++|++|+.||.+.
T Consensus       166 Dlkp~NIll-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~  244 (321)
T 2c30_A          166 DIKSDSILL-TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD  244 (321)
T ss_dssp             CCSGGGEEE-CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CCCHHHEEE-CCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                78898 578899999999998776532 2234456 9999999999888999999999999999999999999754


Q ss_pred             CCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHh
Q psy323          153 ESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIP  232 (255)
Q Consensus       153 ~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  232 (255)
                      .      ....+..+..   .++...                                      ......+.++.+++.+
T Consensus       245 ~------~~~~~~~~~~---~~~~~~--------------------------------------~~~~~~~~~l~~li~~  277 (321)
T 2c30_A          245 S------PVQAMKRLRD---SPPPKL--------------------------------------KNSHKVSPVLRDFLER  277 (321)
T ss_dssp             C------HHHHHHHHHH---SSCCCC--------------------------------------TTGGGSCHHHHHHHHH
T ss_pred             C------HHHHHHHHhc---CCCCCc--------------------------------------CccccCCHHHHHHHHH
Confidence            3      2222222211   111000                                      0112356788999999


Q ss_pred             ccccCCCCCCCHHHHhcCcCCCC
Q psy323          233 MLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       233 ~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ||+.||++|||++++++||||++
T Consensus       278 ~l~~dp~~Rps~~ell~hp~~~~  300 (321)
T 2c30_A          278 MLVRDPQERATAQELLDHPFLLQ  300 (321)
T ss_dssp             HSCSSTTTSCCHHHHHTSGGGGG
T ss_pred             HccCChhhCcCHHHHhcChhhcc
Confidence            99999999999999999999963


No 89 
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.97  E-value=2e-32  Score=232.24  Aligned_cols=225  Identities=18%  Similarity=0.279  Sum_probs=155.8

Q ss_pred             chhHHHhhhhhhHHHHHHHHHHHHhhhh----hhhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            9 PDVKVMENMFVDAIIARIWIKAVMKKKK----LLLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~iv~~~~l~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +|+.+++.+.|+||++   +.+++....    ..++.++++...........+.+++..+..++.|++.|| |||     
T Consensus        58 ~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iv  134 (353)
T 2b9h_A           58 REIKILKHFKHENIIT---IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVI  134 (353)
T ss_dssp             HHHHHHHHCCCTTBCC---EEEECCCSCSTTCCCEEEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHhCcCCCcCC---eeeeecccccCccceEEEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            5899999999999998   776655431    122444444443333333446799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCc-----------ccccccc-ccccchhhhhc-CCCCCchhHHHHHHHH
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDET-----------ICREDIH-RQYKAVELIYT-KEFDMKIDIWSTACLT  139 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~-----------~~~~~~~-~~y~aPE~l~~-~~~~~~~DiwSlG~il  139 (255)
                            +||++ +.++.+||+|||+++......           .....++ +.|+|||++.+ ..++.++||||+||++
T Consensus       135 H~Dlkp~Nil~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il  213 (353)
T 2b9h_A          135 HRDLKPSNLLI-NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL  213 (353)
T ss_dssp             CSCCCGGGEEE-CTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHH
T ss_pred             cCCCCHHHeEE-cCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHH
Confidence                  78898 578899999999998765321           1122345 88999999876 4789999999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCC
Q psy323          140 FELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIP  219 (255)
Q Consensus       140 ~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
                      ++|++|++||.+.+      ..+++..+....|.++...............+..    ....... .....       ..
T Consensus       214 ~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~-------~~  275 (353)
T 2b9h_A          214 AELFLRRPIFPGRD------YRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIK----SLPMYPA-APLEK-------MF  275 (353)
T ss_dssp             HHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHH----TSCCCCC-CCHHH-------HS
T ss_pred             HHHHhCCCCCCCCC------cHHHHHHHHHHhCCCchhccccccccchhhHHhh----cccCCCC-cchhh-------hc
Confidence            99999999998765      5677788888888775322111100000000000    0000000 00000       11


Q ss_pred             hhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          220 KEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       220 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ...+.++.+|+.+||+.||++|||++++++||||++
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (353)
T 2b9h_A          276 PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT  311 (353)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             ccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence            245688999999999999999999999999999974


No 90 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.97  E-value=1.3e-32  Score=239.78  Aligned_cols=199  Identities=11%  Similarity=0.132  Sum_probs=151.2

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc---cCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT---RSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|..+++.+.|+||++   +..++...+.+ +.++++..........   .+.+++..++.++.|++.|| |||    
T Consensus       121 ~~~E~~il~~~~hp~Iv~---l~~~~~~~~~~-~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gi  196 (437)
T 4aw2_A          121 FREERDVLVNGDSKWITT---LHYAFQDDNNL-YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY  196 (437)
T ss_dssp             HHHHHHHHHHSCTTTBCC---EEEEEECSSEE-EEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHhCCCCCEEE---EEEEEeeCCEE-EEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            456999999999999999   88888777664 5666665543322221   35799999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcc--cccccc-ccccchhhhh-----cCCCCCchhHHHHHHHHHHHh
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETI--CREDIH-RQYKAVELIY-----TKEFDMKIDIWSTACLTFELV  143 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~--~~~~~~-~~y~aPE~l~-----~~~~~~~~DiwSlG~il~~l~  143 (255)
                             +|||+ +.++.+||+|||+|+.......  .+..++ +.|+|||++.     +..|+.++||||+||++|+|+
T Consensus       197 iHrDLKp~NILl-~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ell  275 (437)
T 4aw2_A          197 VHRDIKPDNILM-DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML  275 (437)
T ss_dssp             ECCCCSGGGEEE-CTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHH
T ss_pred             EecccCHHHeeE-cCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHH
Confidence                   79999 5889999999999987654322  233456 9999999998     346899999999999999999


Q ss_pred             hCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhH
Q psy323          144 TGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDA  223 (255)
Q Consensus       144 ~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (255)
                      +|++||.+.+      ..+....+.......          .             ++   .             .....+
T Consensus       276 tG~~Pf~~~~------~~~~~~~i~~~~~~~----------~-------------~p---~-------------~~~~~s  310 (437)
T 4aw2_A          276 YGETPFYAES------LVETYGKIMNHKERF----------Q-------------FP---T-------------QVTDVS  310 (437)
T ss_dssp             HSSCTTCCSS------HHHHHHHHHTHHHHC----------C-------------CC---S-------------SCCCSC
T ss_pred             hCCCCCCCCC------hhHHHHhhhhccccc----------c-------------CC---c-------------ccccCC
Confidence            9999998654      334444443211100          0             00   0             012356


Q ss_pred             HHHHHHHHhccccCCCC--CCCHHHHhcCcCCCC
Q psy323          224 KQLVRFLIPMLRLNPNK--RETAEQCLQNEWLIK  255 (255)
Q Consensus       224 ~~~~~li~~~L~~dP~~--R~t~~e~l~hp~~~~  255 (255)
                      .++.+||.+||..+|++  |++++|+++||||++
T Consensus       311 ~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~  344 (437)
T 4aw2_A          311 ENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG  344 (437)
T ss_dssp             HHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence            88999999999999988  999999999999974


No 91 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.97  E-value=5.1e-33  Score=237.09  Aligned_cols=198  Identities=17%  Similarity=0.248  Sum_probs=136.2

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.+ +.++++.......  ....+.+++..++.++.|++.|| |||      
T Consensus        64 ~~E~~~l~~l~hpniv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH  139 (361)
T 3uc3_A           64 QREIINHRSLRHPNIVR---FKEVILTPTHL-AIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH  139 (361)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHhCCCCCCCc---EEEEEeeCCEE-EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            36899999999999999   88888776653 4555554443222  22346799999999999999999 998      


Q ss_pred             -----CCceeeCCCC--cEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCc-hhHHHHHHHHHHHhhCCCCC
Q psy323           79 -----EELLYPTQNI--EIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMK-IDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 -----~niLl~~~~~--~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~-~DiwSlG~il~~l~~g~~pf  149 (255)
                           +|||+. .++  .+||+|||+++...........++ +.|+|||++.+..++.+ +||||+||++|+|++|+.||
T Consensus       140 ~Dlkp~Nill~-~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf  218 (361)
T 3uc3_A          140 RDLKLENTLLD-GSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF  218 (361)
T ss_dssp             CCCCGGGEEEC-SSSSCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCCCHHHEEEc-CCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCC
Confidence                 789994 443  599999999986544334445566 99999999998877654 89999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+.....   .  ....+........         .             .    +             .....+.++.+|
T Consensus       219 ~~~~~~~---~--~~~~~~~~~~~~~---------~-------------~----~-------------~~~~~s~~~~~l  254 (361)
T 3uc3_A          219 EDPEEPR---D--YRKTIQRILSVKY---------S-------------I----P-------------DDIRISPECCHL  254 (361)
T ss_dssp             C----CC---C--HHHHHHHHHTTCC---------C-------------C----C-------------TTSCCCHHHHHH
T ss_pred             CCCccHH---H--HHHHHHHHhcCCC---------C-------------C----C-------------CcCCCCHHHHHH
Confidence            8543211   1  1111111111100         0             0    0             011346788999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      |.+||+.||++|||++++++||||+
T Consensus       255 i~~~L~~dP~~Rps~~ell~hp~f~  279 (361)
T 3uc3_A          255 ISRIFVADPATRISIPEIKTHSWFL  279 (361)
T ss_dssp             HHHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred             HHHHccCChhHCcCHHHHHhCcchh
Confidence            9999999999999999999999984


No 92 
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97  E-value=5.9e-32  Score=229.08  Aligned_cols=228  Identities=16%  Similarity=0.300  Sum_probs=156.6

Q ss_pred             chhHHHhhhhhhH------HHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc---cCCCCHHHHHHHHHHHHHhh-ccC
Q psy323            9 PDVKVMENMFVDA------IIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT---RSSFSLTTFSKYVKQISQFV-YMN   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~------iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~l~~~~~~~~~~qll~~l-ylH   78 (255)
                      +|+.+++.+.|++      ++.   +..++...+.. +.++++........+.   ...+++..++.++.|++.|| |||
T Consensus        65 ~E~~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~-~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH  140 (355)
T 2eu9_A           65 LEINVLKKIKEKDKENKFLCVL---MSDWFNFHGHM-CIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH  140 (355)
T ss_dssp             HHHHHHHHHHHHCTTSCSCBCC---EEEEEEETTEE-EEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCCceeEEE---eeeeeeeCCeE-EEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4777888887766      444   33333333332 3344443322211111   24699999999999999999 998


Q ss_pred             -----------CCceee------------------CCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCC
Q psy323           79 -----------EELLYP------------------TQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDM  128 (255)
Q Consensus        79 -----------~niLl~------------------~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~  128 (255)
                                 +|||+.                  +.++.+||+|||+++....  ......+ +.|+|||++.+..++.
T Consensus       141 ~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~  218 (355)
T 2eu9_A          141 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE--HHTTIVATRHYRPPEVILELGWAQ  218 (355)
T ss_dssp             TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS--CCCSSCSCGGGCCHHHHTTCCCCT
T ss_pred             HCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc--cccCCcCCCcccCCeeeecCCCCC
Confidence                       688883                  2467899999999987655  3344566 9999999999989999


Q ss_pred             chhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccH
Q psy323          129 KIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNF  208 (255)
Q Consensus       129 ~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (255)
                      ++||||+||++|+|++|..||.+.+      ..+.+..+....+.+|..++......   ..++. .+......   ...
T Consensus       219 ~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~p~~~~~~~~~~---~~~~~-~~~~~~~~---~~~  285 (355)
T 2eu9_A          219 PCDVWSIGCILFEYYRGFTLFQTHE------NREHLVMMEKILGPIPSHMIHRTRKQ---KYFYK-GGLVWDEN---SSD  285 (355)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCHHHHHHCSCG---GGEET-TEECCCTT---SHH
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCcHHHhhhccch---hhhcc-cccccccc---cch
Confidence            9999999999999999999998654      56777888888999888776543322   11111 00000000   000


Q ss_pred             HHHHHH-------hcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          209 YRILAK-------SYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       209 ~~~~~~-------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ......       ........+.++.+||.+||+.||++|||++++++||||++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  339 (355)
T 2eu9_A          286 GRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAG  339 (355)
T ss_dssp             HHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             hccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcC
Confidence            011110       11122345789999999999999999999999999999974


No 93 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.97  E-value=1.4e-32  Score=226.29  Aligned_cols=198  Identities=17%  Similarity=0.286  Sum_probs=148.9

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.....  ........+++..+..++.|++.|| |||      
T Consensus        53 ~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H  128 (284)
T 3kk8_A           53 EREARICRKLQHPNIVR---LHDSIQEESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH  128 (284)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHcCCCCcCe---EEEEEEcCCEE-EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCc
Confidence            46899999999999999   88887766653 44455544322  2223346799999999999999999 998      


Q ss_pred             -----CCceeeCC--CCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -----EELLYPTQ--NIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -----~niLl~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                           +||++...  .+.+||+|||++.............+ +.|+|||++.+..++.++||||+|+++++|++|..||.
T Consensus       129 ~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~  208 (284)
T 3kk8_A          129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW  208 (284)
T ss_dssp             SCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCC
Confidence                 78888422  23499999999988776544455566 99999999999899999999999999999999999997


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +.+      .......+.......+..                                        .....+.++.+|+
T Consensus       209 ~~~------~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~li  242 (284)
T 3kk8_A          209 DED------QHRLYAQIKAGAYDYPSP----------------------------------------EWDTVTPEAKSLI  242 (284)
T ss_dssp             CSS------HHHHHHHHHHTCCCCCTT----------------------------------------TTTTSCHHHHHHH
T ss_pred             CCc------hhHHHHHHHhccccCCch----------------------------------------hhcccCHHHHHHH
Confidence            543      222222222211111100                                        0123567889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+||+.||++|||++++++||||++
T Consensus       243 ~~~l~~dp~~Rps~~~~l~h~~~~~  267 (284)
T 3kk8_A          243 DSMLTVNPKKRITADQALKVPWICN  267 (284)
T ss_dssp             HHHSCSSTTTSCCHHHHTTSHHHHS
T ss_pred             HHHcccChhhCCCHHHHhcCccccC
Confidence            9999999999999999999999864


No 94 
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.97  E-value=8.1e-33  Score=245.09  Aligned_cols=196  Identities=20%  Similarity=0.297  Sum_probs=150.6

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+.+++.+.||||++   +++++...+.. +.++++.....  ........+++..++.++.|++.|| |||      
T Consensus        84 ~~E~~~l~~l~hpniv~---~~~~~~~~~~~-~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH  159 (494)
T 3lij_A           84 LEEVAVLKLLDHPNIMK---LYDFFEDKRNY-YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVH  159 (494)
T ss_dssp             HHHHHHHTTCCCTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHhCCCCCCCe---EEEEEEeCCEE-EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence            35999999999999999   88888876663 45555544432  2233346799999999999999999 998      


Q ss_pred             -----CCceeeCC--CCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -----EELLYPTQ--NIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -----~niLl~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                           +|||+...  ++.+||+|||+++...........++ +.|+|||++.+ .|+.++||||+||++|+|++|.+||.
T Consensus       160 ~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~  238 (494)
T 3lij_A          160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFG  238 (494)
T ss_dssp             SCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCC
Confidence                 78999532  45699999999988776555566667 99999999864 68999999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +..      ..+.+..+......++...|                                        ...+.++.+||
T Consensus       239 ~~~------~~~~~~~i~~~~~~~~~~~~----------------------------------------~~~s~~~~~li  272 (494)
T 3lij_A          239 GQT------DQEILRKVEKGKYTFDSPEW----------------------------------------KNVSEGAKDLI  272 (494)
T ss_dssp             CSS------HHHHHHHHHHTCCCCCSGGG----------------------------------------TTSCHHHHHHH
T ss_pred             CCC------HHHHHHHHHhCCCCCCchhc----------------------------------------ccCCHHHHHHH
Confidence            654      33334433332211111100                                        23467889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+||+.||.+|||++++++||||+
T Consensus       273 ~~~L~~dp~~R~s~~e~l~hp~~~  296 (494)
T 3lij_A          273 KQMLQFDSQRRISAQQALEHPWIK  296 (494)
T ss_dssp             HHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred             HHHCCCChhhCccHHHHhcCcccc
Confidence            999999999999999999999986


No 95 
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.97  E-value=5e-32  Score=231.28  Aligned_cols=197  Identities=15%  Similarity=0.274  Sum_probs=147.8

Q ss_pred             CchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|..+++.+ .|+||+.   +.+++...+.. +.++++........  .....+++..+..++.|++.|| |||     
T Consensus       147 ~~E~~~l~~l~~hp~iv~---~~~~~~~~~~~-~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~  222 (365)
T 2y7j_A          147 RRETHILRQVAGHPHIIT---LIDSYESSSFM-FLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIV  222 (365)
T ss_dssp             HHHHHHHHHHTTCTTBCC---EEEEEEBSSEE-EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhcCCCCEeE---EEEEEeeCCEE-EEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            4588899998 7999999   77777665553 45555544432221  2235799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcC------CCCCchhHHHHHHHHHHHhhC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTK------EFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~------~~~~~~DiwSlG~il~~l~~g  145 (255)
                            +||++ +.++.+||+|||++..+.........++ +.|+|||++.+.      .++.++||||+||++|+|++|
T Consensus       223 H~Dlkp~NIl~-~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g  301 (365)
T 2y7j_A          223 HRDLKPENILL-DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG  301 (365)
T ss_dssp             CSCCSGGGEEE-CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHS
T ss_pred             cCCCCHHHEEE-CCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHC
Confidence                  78888 5889999999999988776545555667 999999999743      578899999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      ..||.+..      ....+..+......++...+                                        ...+.+
T Consensus       302 ~~pf~~~~------~~~~~~~i~~~~~~~~~~~~----------------------------------------~~~~~~  335 (365)
T 2y7j_A          302 SPPFWHRR------QILMLRMIMEGQYQFSSPEW----------------------------------------DDRSST  335 (365)
T ss_dssp             SCSSCCSS------HHHHHHHHHHTCCCCCHHHH----------------------------------------SSSCHH
T ss_pred             CCCCCCCC------HHHHHHHHHhCCCCCCCccc----------------------------------------ccCCHH
Confidence            99997543      22333333221111111000                                        134577


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+|+.+||+.||++|||++++++||||++
T Consensus       336 ~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          336 VKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            899999999999999999999999999985


No 96 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.97  E-value=5.3e-33  Score=235.31  Aligned_cols=201  Identities=20%  Similarity=0.295  Sum_probs=147.8

Q ss_pred             CCchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      ..+|++++..+ .|+||++   +.+++...+.+ +.++++.....  ......+.+++..+..++.|++.|| |||    
T Consensus        62 ~~~E~~~l~~~~~hp~iv~---~~~~~~~~~~~-~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~gi  137 (342)
T 2qr7_A           62 PTEEIEILLRYGQHPNIIT---LKDVYDDGKYV-YVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV  137 (342)
T ss_dssp             CHHHHHHHHHHTTSTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hHHHHHHHHHhcCCCCcCe---EEEEEEcCCEE-EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            34588888888 7999999   88888776653 56666654432  2223346799999999999999999 998    


Q ss_pred             -------CCceeeCCCC---cEEEeecCccccCCCC-cccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCC
Q psy323           79 -------EELLYPTQNI---EIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 -------~niLl~~~~~---~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~  146 (255)
                             +|||+.+.++   .+||+|||+++..... ......++ +.|+|||++.+..|+.++||||+||++|+|++|.
T Consensus       138 vHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  217 (342)
T 2qr7_A          138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGY  217 (342)
T ss_dssp             ECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             EeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCC
Confidence                   7899854433   5999999999876543 22334456 9999999999888899999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+.....   ..+.+..+...--..+..                                        .....+.++
T Consensus       218 ~Pf~~~~~~~---~~~~~~~i~~~~~~~~~~----------------------------------------~~~~~s~~~  254 (342)
T 2qr7_A          218 TPFANGPDDT---PEEILARIGSGKFSLSGG----------------------------------------YWNSVSDTA  254 (342)
T ss_dssp             CSSCSSTTSC---HHHHHHHHHHCCCCCCST----------------------------------------TTTTSCHHH
T ss_pred             CCCCCCCcCC---HHHHHHHHccCCcccCcc----------------------------------------ccccCCHHH
Confidence            9997543211   112222221100000000                                        112456889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+||.+||+.||++|||+.++++||||.
T Consensus       255 ~~li~~~L~~dP~~R~t~~~il~hp~~~  282 (342)
T 2qr7_A          255 KDLVSKMLHVDPHQRLTAALVLRHPWIV  282 (342)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred             HHHHHHHCCCChhHCcCHHHHhcCCeec
Confidence            9999999999999999999999999985


No 97 
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.97  E-value=1.9e-32  Score=238.02  Aligned_cols=199  Identities=20%  Similarity=0.311  Sum_probs=139.8

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCC--CCCcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPP--HQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+|+.+.|+||++   +.+++.....  +.++++...  +.......+.+++..++.++.|++.|| |||     
T Consensus       187 ~~~E~~~l~~l~hpniv~---l~~~~~~~~~--~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv  261 (419)
T 3i6u_A          187 VETEIEILKKLNHPCIIK---IKNFFDAEDY--YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII  261 (419)
T ss_dssp             HHHHHHHHHHCCCTTBCC---CCEEEESSEE--EEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhCCCCCEee---EEEEEecCce--EEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            446999999999999999   8887765543  334444333  222233446799999999999999999 998     


Q ss_pred             ------CCceeeCC--CCcEEEeecCccccCCCCcccccccc-ccccchhhhhc---CCCCCchhHHHHHHHHHHHhhCC
Q psy323           79 ------EELLYPTQ--NIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT---KEFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 ------~niLl~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~---~~~~~~~DiwSlG~il~~l~~g~  146 (255)
                            +|||+...  ++.+||+|||+|+...........++ +.|+|||++.+   ..|+.++||||+||++++|++|.
T Consensus       262 HrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~  341 (419)
T 3i6u_A          262 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY  341 (419)
T ss_dssp             CSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCC
Confidence                  79999532  34699999999998776544555667 99999999864   46788999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+.....     .....+.......+...                                        ....+.++
T Consensus       342 ~pf~~~~~~~-----~~~~~i~~~~~~~~~~~----------------------------------------~~~~~~~~  376 (419)
T 3i6u_A          342 PPFSEHRTQV-----SLKDQITSGKYNFIPEV----------------------------------------WAEVSEKA  376 (419)
T ss_dssp             CSSCCCSSSC-----CHHHHHHTTCCCCCHHH----------------------------------------HTTSCHHH
T ss_pred             CCCCCCcchH-----HHHHHHhcCCCCCCchh----------------------------------------hcccCHHH
Confidence            9997543211     11111111000000000                                        02346788


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+|+.+||+.||++|||++++++||||++
T Consensus       377 ~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          377 LDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence            99999999999999999999999999975


No 98 
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.97  E-value=4.1e-32  Score=228.40  Aligned_cols=198  Identities=22%  Similarity=0.300  Sum_probs=144.2

Q ss_pred             CchhHHHhhhh-hhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc----cccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMF-VDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN----LTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~-h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+.+++.+. |+||++   +.+++...+.. +.++++........    .....+++..++.++.|++.|| |||   
T Consensus        76 ~~e~~~l~~l~~~~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g  151 (327)
T 3lm5_A           76 LHEIAVLELAKSCPRVIN---LHEVYENTSEI-ILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN  151 (327)
T ss_dssp             HHHHHHHHHTTTCTTBCC---EEEEEECSSEE-EEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhccCCCCEEE---EEEEEEeCCeE-EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            35888888884 599999   88888766653 44444444322111    2235799999999999999999 998   


Q ss_pred             --------CCceeeC--CCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCC
Q psy323           79 --------EELLYPT--QNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY  147 (255)
Q Consensus        79 --------~niLl~~--~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~  147 (255)
                              +||++..  .++.+||+|||+++............+ +.|+|||++.+..++.++||||+||++++|++|+.
T Consensus       152 ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  231 (327)
T 3lm5_A          152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTS  231 (327)
T ss_dssp             EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             eecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                    7899853  168999999999998766444445566 99999999998899999999999999999999999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+.+      ..+....+.......+..                                        .....+..+.
T Consensus       232 pf~~~~------~~~~~~~i~~~~~~~~~~----------------------------------------~~~~~~~~~~  265 (327)
T 3lm5_A          232 PFVGED------NQETYLNISQVNVDYSEE----------------------------------------TFSSVSQLAT  265 (327)
T ss_dssp             SSCCSS------HHHHHHHHHHTCCCCCTT----------------------------------------TTTTSCHHHH
T ss_pred             CCCCCC------chHHHHHHHhcccccCch----------------------------------------hhcccCHHHH
Confidence            998654      333333333322221111                                        1124567889


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||.+||+.||++|||++++++||||++
T Consensus       266 ~li~~~L~~dP~~Rpt~~~ll~h~~~~~  293 (327)
T 3lm5_A          266 DFIQSLLVKNPEKRPTAEICLSHSWLQQ  293 (327)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTTCGGGCC
T ss_pred             HHHHHHcCCChhhCcCHHHHhCCHhhcc
Confidence            9999999999999999999999999974


No 99 
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.97  E-value=1.2e-32  Score=244.59  Aligned_cols=196  Identities=22%  Similarity=0.311  Sum_probs=150.6

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+.+|+.+.||||++   +.+++...+.. +.++++.....  ......+.+++..++.++.|++.|| |||      
T Consensus        94 ~~E~~~l~~l~hpniv~---~~~~~~~~~~~-~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH  169 (504)
T 3q5i_A           94 YNEISLLKSLDHPNIIK---LFDVFEDKKYF-YLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVH  169 (504)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEECSSEE-EEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHhCCCCCCCe---EEEEEEcCCEE-EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            35999999999999999   88888877663 45555554432  2223346799999999999999999 998      


Q ss_pred             -----CCceeeCCC--CcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -----EELLYPTQN--IEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -----~niLl~~~~--~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                           +|||+...+  ..+||+|||+++...........++ +.|+|||++.+ .|+.++||||+||++|+|++|.+||.
T Consensus       170 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  248 (504)
T 3q5i_A          170 RDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFG  248 (504)
T ss_dssp             SCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCC
Confidence                 789995332  2799999999998876555566677 99999999875 58999999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +.+      ..+.+..+.......+...|                                        ...+.++.+||
T Consensus       249 ~~~------~~~~~~~i~~~~~~~~~~~~----------------------------------------~~~s~~~~~li  282 (504)
T 3q5i_A          249 GQN------DQDIIKKVEKGKYYFDFNDW----------------------------------------KNISDEAKELI  282 (504)
T ss_dssp             CSS------HHHHHHHHHHCCCCCCHHHH----------------------------------------TTSCHHHHHHH
T ss_pred             CCC------HHHHHHHHHcCCCCCCcccc----------------------------------------CCCCHHHHHHH
Confidence            654      33333333321111111110                                        23567899999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+||++||.+|||++++++||||+
T Consensus       283 ~~~L~~dp~~R~t~~e~l~h~~~~  306 (504)
T 3q5i_A          283 KLMLTYDYNKRCTAEEALNSRWIK  306 (504)
T ss_dssp             HHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHcCCChhHCCCHHHHhcCHhhh
Confidence            999999999999999999999985


No 100
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.97  E-value=3.7e-32  Score=231.01  Aligned_cols=192  Identities=14%  Similarity=0.198  Sum_probs=147.5

Q ss_pred             chhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            9 PDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         9 ~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .|..++..+ .|++|+.   +..++...+.+ +.++++..+.....  ...+.+++..++.++.|++.|| |||      
T Consensus        69 ~E~~~l~~~~~hp~iv~---l~~~~~~~~~~-~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH  144 (353)
T 2i0e_A           69 VEKRVLALPGKPPFLTQ---LHSCFQTMDRL-YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY  144 (353)
T ss_dssp             HHHHHHTCTTCCTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHHhcCCCCEEee---EEEEEEcCCEE-EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence            477888777 7999998   88877766653 55566654433222  2236799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCC-Ccccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPEND-ETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~-~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.+|.+||+|||+|+.... .......++ +.|+|||++.+..++.++|+||+||++|+|++|+.||.+
T Consensus       145 rDlkp~NIll-~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~  223 (353)
T 2i0e_A          145 RDLKLDNVML-DSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG  223 (353)
T ss_dssp             CCCCGGGEEE-CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCHHHEEE-cCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence                 78999 5889999999999986433 223344556 999999999999999999999999999999999999986


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      ..+....+...                                            ....+...+.++.+||.
T Consensus       224 ~~------~~~~~~~i~~~--------------------------------------------~~~~p~~~s~~~~~li~  253 (353)
T 2i0e_A          224 ED------EDELFQSIMEH--------------------------------------------NVAYPKSMSKEAVAICK  253 (353)
T ss_dssp             SS------HHHHHHHHHHC--------------------------------------------CCCCCTTSCHHHHHHHH
T ss_pred             CC------HHHHHHHHHhC--------------------------------------------CCCCCCCCCHHHHHHHH
Confidence            43      22233333221                                            01133456788999999


Q ss_pred             hccccCCCCCCC-----HHHHhcCcCCCC
Q psy323          232 PMLRLNPNKRET-----AEQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t-----~~e~l~hp~~~~  255 (255)
                      +||+.||.+|++     ++++++||||++
T Consensus       254 ~lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          254 GLMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             HHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             HHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence            999999999994     699999999974


No 101
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.97  E-value=2.2e-32  Score=224.53  Aligned_cols=196  Identities=16%  Similarity=0.291  Sum_probs=148.8

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+++++.+.|+||++   +.+++...+.. +.++++.....  ......+.+++..++.++.|++.|| |||      
T Consensus        54 ~~E~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H  129 (277)
T 3f3z_A           54 KQEIEIMKSLDHPNIIR---LYETFEDNTDI-YLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH  129 (277)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHhCCCCCEee---EEEEEecCCeE-EEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence            35999999999999999   88888776653 44444443322  2222346799999999999999999 998      


Q ss_pred             -----CCceee--CCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -----EELLYP--TQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -----~niLl~--~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                           +||++.  +.++.+||+|||++.............+ +.|+|||++.+. ++.++||||+||++++|++|..||.
T Consensus       130 ~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~  208 (277)
T 3f3z_A          130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFS  208 (277)
T ss_dssp             CCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCC
Confidence                 688883  3567899999999988766545555566 999999998765 8899999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +..      ..+....+......++...+                                        ...++++.+++
T Consensus       209 ~~~------~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~li  242 (277)
T 3f3z_A          209 APT------DSEVMLKIREGTFTFPEKDW----------------------------------------LNVSPQAESLI  242 (277)
T ss_dssp             CSS------HHHHHHHHHHCCCCCCHHHH----------------------------------------TTSCHHHHHHH
T ss_pred             CCC------HHHHHHHHHhCCCCCCchhh----------------------------------------hcCCHHHHHHH
Confidence            543      33333333332222221110                                        13457889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+||+.||++|||+.++++||||+
T Consensus       243 ~~~l~~dp~~R~s~~~~l~h~~~~  266 (277)
T 3f3z_A          243 RRLLTKSPKQRITSLQALEHEWFE  266 (277)
T ss_dssp             HHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred             HHHccCChhhCcCHHHHhcCHHHh
Confidence            999999999999999999999986


No 102
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.97  E-value=4.4e-32  Score=223.90  Aligned_cols=196  Identities=20%  Similarity=0.292  Sum_probs=140.0

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc------cccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN------LTRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      .+|+++++.+.|+||++   +.+++...+.. +.++++........      .....+++..++.++.|++.|| |||  
T Consensus        68 ~~E~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~  143 (285)
T 3is5_A           68 EAEIEVLKSLDHPNIIK---IFEVFEDYHNM-YIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ  143 (285)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEECSSEE-EEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCchHHh---HHHheecCCeE-EEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            46999999999999999   88888766553 45555554422211      1236799999999999999999 998  


Q ss_pred             ---------CCceeeC--CCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCC
Q psy323           79 ---------EELLYPT--QNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 ---------~niLl~~--~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~  146 (255)
                               +||++.+  .++.+||+|||+++............+ +.|+|||++. ..++.++||||+||++++|++|+
T Consensus       144 ~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~  222 (285)
T 3is5_A          144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC  222 (285)
T ss_dssp             TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCC
Confidence                     7899853  357899999999987765444445556 9999999986 46889999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+..       ...+...... ..+.                       .   ..             .....++++
T Consensus       223 ~pf~~~~-------~~~~~~~~~~-~~~~-----------------------~---~~-------------~~~~~~~~~  255 (285)
T 3is5_A          223 LPFTGTS-------LEEVQQKATY-KEPN-----------------------Y---AV-------------ECRPLTPQA  255 (285)
T ss_dssp             CSSCCSS-------HHHHHHHHHH-CCCC-----------------------C---CC---------------CCCCHHH
T ss_pred             CCCCCCC-------HHHHHhhhcc-CCcc-----------------------c---cc-------------ccCcCCHHH
Confidence            9998543       1111111110 0000                       0   00             001245788


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+|+.+||+.||++|||+.|+++||||++
T Consensus       256 ~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          256 VDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            89999999999999999999999999985


No 103
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.97  E-value=2.1e-32  Score=236.30  Aligned_cols=200  Identities=19%  Similarity=0.293  Sum_probs=137.8

Q ss_pred             chhHHH-hhhhhhHHHHHHHHHHHHhh----hhhhhhhhcCCCCCCCCccc----ccCCCCHHHHHHHHHHHHHhh-ccC
Q psy323            9 PDVKVM-ENMFVDAIIARIWIKAVMKK----KKLLLKEILPIQPPHQHKNL----TRSSFSLTTFSKYVKQISQFV-YMN   78 (255)
Q Consensus         9 ~e~~~l-~~~~h~~iv~~~~l~~~~~~----~~~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~~~~qll~~l-ylH   78 (255)
                      +|+.++ +...|+||++   +.+++..    .+. ++.++++.........    ....+++..++.++.|++.|| |||
T Consensus       103 ~E~~~~~~~~~hp~iv~---l~~~~~~~~~~~~~-~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH  178 (400)
T 1nxk_A          103 REVELHWRASQCPHIVR---IVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  178 (400)
T ss_dssp             HHHHHHHHHTTSTTBCC---EEEEEEEEETTEEE-EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCcce---EeEEEeecccCCcE-EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            477776 4558999999   8887764    222 3455555443221111    123599999999999999999 998


Q ss_pred             -----------CCceeeCC--CCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh
Q psy323           79 -----------EELLYPTQ--NIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT  144 (255)
Q Consensus        79 -----------~niLl~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~  144 (255)
                                 +|||+...  ++.+||+|||+++........+..++ +.|+|||++.+..|+.++||||+||++|+|++
T Consensus       179 ~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  258 (400)
T 1nxk_A          179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC  258 (400)
T ss_dssp             HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHH
T ss_pred             HCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHh
Confidence                       79999532  68899999999998766445556666 99999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHH
Q psy323          145 GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAK  224 (255)
Q Consensus       145 g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      |..||.+.......  ......+.......+.                           +             .....+.
T Consensus       259 g~~pf~~~~~~~~~--~~~~~~i~~~~~~~~~---------------------------~-------------~~~~~s~  296 (400)
T 1nxk_A          259 GYPPFYSNHGLAIS--PGMKTRIRMGQYEFPN---------------------------P-------------EWSEVSE  296 (400)
T ss_dssp             SSCSCCCCTTCSSC--CSHHHHHHHTCCCCCT---------------------------T-------------TTTTSCH
T ss_pred             CCCCCCCCcccccc--HHHHHHHHcCcccCCC---------------------------c-------------ccccCCH
Confidence            99999865432211  0111111110000000                           0             0024568


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      ++.+||.+||+.||++|||++++++||||+
T Consensus       297 ~~~~li~~~L~~dP~~Rpt~~eil~hp~~~  326 (400)
T 1nxk_A          297 EVKMLIRNLLKTEPTQRMTITEFMNHPWIM  326 (400)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            899999999999999999999999999985


No 104
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.97  E-value=3.3e-32  Score=234.19  Aligned_cols=229  Identities=13%  Similarity=0.171  Sum_probs=144.0

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc----ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL----TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+|+.+++.+.|+||++   +++++...+.+ +.++++..+......    ....+++..++.++.|++.|| |||    
T Consensus        74 ~~E~~~l~~l~h~niv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  149 (389)
T 3gni_B           74 QGELHVSKLFNHPNIVP---YRATFIADNEL-WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGY  149 (389)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEEETTEE-EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHhCCCCCCCc---EeEEEEECCEE-EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            35999999999999999   88888877663 455555443322211    125699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCC--------cccccccc-ccccchhhhhc--CCCCCchhHHHHHHHHH
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDE--------TICREDIH-RQYKAVELIYT--KEFDMKIDIWSTACLTF  140 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~--------~~~~~~~~-~~y~aPE~l~~--~~~~~~~DiwSlG~il~  140 (255)
                             +|||+ +.++.+||+|||.+......        ......++ +.|+|||++.+  ..++.++||||+||+++
T Consensus       150 vHrDlkp~NIll-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~  228 (389)
T 3gni_B          150 VHRSVKASHILI-SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC  228 (389)
T ss_dssp             ECCCCSGGGEEE-CTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEE-cCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHH
Confidence                   79999 58889999999988654321        11122345 88999999998  47899999999999999


Q ss_pred             HHhhCCCCCCCCCCCCCCccHHHHHHHHHH--------hcCCChhhhhhhhhhccccccccccc--cccccCCCCccHHH
Q psy323          141 ELVTGDYMFNPFESKYYTIDEHHILKIIQL--------MAEIPPNLMDNERCIRNIKVLLERDQ--HNITSMNAKDNFYR  210 (255)
Q Consensus       141 ~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  210 (255)
                      +|++|+.||.+.+.      ...+..+...        ...+..........      .....+  .......+ .+ ..
T Consensus       229 el~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~-~~  294 (389)
T 3gni_B          229 ELANGHVPFKDMPA------TQMLLEKLNGTVPCLLDTSTIPAEELTMSPSR------SVANSGLSDSLTTSTP-RP-SN  294 (389)
T ss_dssp             HHHHSSCTTTTCCS------TTHHHHC-----------------------------------------------------
T ss_pred             HHHHCCCCCCCCCH------HHHHHHHhcCCCCccccccccccccccccccc------cccccccccccccCcc-cc-cc
Confidence            99999999986542      2222211110        00000000000000      000000  00000000 00 00


Q ss_pred             HHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          211 ILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ........+...+.++.+||.+||++||++|||++|+++||||++
T Consensus       295 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~  339 (389)
T 3gni_B          295 GDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  339 (389)
T ss_dssp             -----------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred             CCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence            000011133456788999999999999999999999999999973


No 105
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.97  E-value=1.5e-31  Score=238.29  Aligned_cols=196  Identities=15%  Similarity=0.219  Sum_probs=150.0

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc------ccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL------TRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      ..|..+|+.+.|+||+.   +..++...+.+ +.++++..+......      ....+++..++.|+.|++.|| |||  
T Consensus       233 ~~E~~iL~~l~hp~Iv~---l~~~~~~~~~l-~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~  308 (543)
T 3c4z_A          233 MVEKKILAKVHSRFIVS---LAYAFETKTDL-CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR  308 (543)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCEee---EEEEEeeCCEE-EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc
Confidence            35899999999999999   88887776653 566666554332111      134699999999999999999 998  


Q ss_pred             ---------CCceeeCCCCcEEEeecCccccCCCCcccc-cccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCC
Q psy323           79 ---------EELLYPTQNIEIVITDLEYVRPENDETICR-EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY  147 (255)
Q Consensus        79 ---------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~-~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~  147 (255)
                               +|||+ +.+|.+||+|||+++........+ ..++ +.|+|||++.+..|+.++|+||+||++|+|++|++
T Consensus       309 gIvHrDLKP~NILl-~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~  387 (543)
T 3c4z_A          309 NIIYRDLKPENVLL-DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG  387 (543)
T ss_dssp             TEECCCCCGGGEEE-CTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCcccCCChHHEEE-eCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCC
Confidence                     79999 588999999999998876543333 3466 99999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCccHHHHH-HHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          148 MFNPFESKYYTIDEHHIL-KIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      ||.+.+...   ....+. .+..                                            .....+...+.++
T Consensus       388 PF~~~~~~~---~~~~~~~~i~~--------------------------------------------~~~~~p~~~s~~~  420 (543)
T 3c4z_A          388 PFRARGEKV---ENKELKQRVLE--------------------------------------------QAVTYPDKFSPAS  420 (543)
T ss_dssp             SSCCTTCCC---CHHHHHHHHHH--------------------------------------------CCCCCCTTSCHHH
T ss_pred             CCCCCccch---hHHHHHHHHhh--------------------------------------------cccCCCcccCHHH
Confidence            998653211   112211 1111                                            0111334567889


Q ss_pred             HHHHHhccccCCCCCCC-----HHHHhcCcCCCC
Q psy323          227 VRFLIPMLRLNPNKRET-----AEQCLQNEWLIK  255 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~  255 (255)
                      .+||.+||+.||++||+     ++++++||||++
T Consensus       421 ~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             HHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             HHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence            99999999999999996     589999999974


No 106
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.97  E-value=4e-32  Score=228.38  Aligned_cols=204  Identities=19%  Similarity=0.300  Sum_probs=130.6

Q ss_pred             CchhHHHhhhh-hhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC--cccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMF-VDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH--KNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~-h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+. |+||++   +.+++...+.. +.++++......  .....+.+++..++.++.|++.|| |||     
T Consensus        53 ~~e~~~l~~l~~h~niv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv  128 (325)
T 3kn6_A           53 QKEITALKLCEGHPNIVK---LHEVFHDQLHT-FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVV  128 (325)
T ss_dssp             HHHHHHHHHTTTCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhcCCCCeeE---EEEEEEcCCEE-EEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            45889999997 999999   88888876663 455555544322  222346799999999999999999 998     


Q ss_pred             ------CCceeeCCC--CcEEEeecCccccCCCC-cccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 ------EELLYPTQN--IEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 ------~niLl~~~~--~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                            +|||+...+  ..+||+|||+++..... ......++ +.|+|||++.+..++.++||||+||++++|++|..|
T Consensus       129 H~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  208 (325)
T 3kn6_A          129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP  208 (325)
T ss_dssp             CCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             ecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCC
Confidence                  789995332  28999999999876542 23344455 999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccH-HHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          149 FNPFESKYYTIDE-HHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       149 f~~~~~~~~~~~~-~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      |.+.+........ +.+..+......++...                                        ....+.++.
T Consensus       209 f~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------------------------------------~~~~s~~~~  248 (325)
T 3kn6_A          209 FQSHDRSLTCTSAVEIMKKIKKGDFSFEGEA----------------------------------------WKNVSQEAK  248 (325)
T ss_dssp             TC-------CCCHHHHHHHHTTTCCCCCSHH----------------------------------------HHTSCHHHH
T ss_pred             CCCCccccccccHHHHHHHHHcCCCCCCccc----------------------------------------ccCCCHHHH
Confidence            9865422111111 11111111000000000                                        023568899


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||.+||+.||++|||++++++||||++
T Consensus       249 ~li~~~L~~dP~~Rpt~~ell~h~w~~~  276 (325)
T 3kn6_A          249 DLIQGLLTVDPNKRLKMSGLRYNEWLQD  276 (325)
T ss_dssp             HHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred             HHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence            9999999999999999999999999974


No 107
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.97  E-value=6.1e-32  Score=231.23  Aligned_cols=192  Identities=15%  Similarity=0.208  Sum_probs=144.5

Q ss_pred             chhHH-HhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            9 PDVKV-MENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         9 ~e~~~-l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .|..+ ++.+.|+||++   +..++...+.+ +.++++.......  ....+.+++..++.++.|++.|| |||      
T Consensus        87 ~e~~~ll~~~~hp~Iv~---l~~~~~~~~~~-~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH  162 (373)
T 2r5t_A           87 SERNVLLKNVKHPFLVG---LHFSFQTADKL-YFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVY  162 (373)
T ss_dssp             ----CCBCCCCCTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHhCCCCCCCC---EEEEEEeCCEE-EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence            34444 57789999999   88888776654 5556665543322  22246799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCC-Ccccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPEND-ETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~-~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.+|.+||+|||+++.... .......++ +.|+|||++.+..|+.++|+||+||++|+|++|..||.+
T Consensus       163 rDlkp~NIll-~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~  241 (373)
T 2r5t_A          163 RDLKPENILL-DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS  241 (373)
T ss_dssp             CCCCGGGEEE-CTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCCHHHEEE-CCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence                 78999 5889999999999986433 223444566 999999999999999999999999999999999999985


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      ..+....+...                                            ....+...+.++.+||.
T Consensus       242 ~~------~~~~~~~i~~~--------------------------------------------~~~~~~~~~~~~~~li~  271 (373)
T 2r5t_A          242 RN------TAEMYDNILNK--------------------------------------------PLQLKPNITNSARHLLE  271 (373)
T ss_dssp             SB------HHHHHHHHHHS--------------------------------------------CCCCCSSSCHHHHHHHH
T ss_pred             CC------HHHHHHHHHhc--------------------------------------------ccCCCCCCCHHHHHHHH
Confidence            43      22333333221                                            00122345688899999


Q ss_pred             hccccCCCCCCCH----HHHhcCcCCCC
Q psy323          232 PMLRLNPNKRETA----EQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~----~e~l~hp~~~~  255 (255)
                      +||+.||.+|+++    +++++||||++
T Consensus       272 ~lL~~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          272 GLLQKDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             HHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             HHcccCHHhCCCCCCCHHHHhCCccccC
Confidence            9999999999986    69999999974


No 108
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.97  E-value=4.4e-32  Score=229.44  Aligned_cols=198  Identities=18%  Similarity=0.238  Sum_probs=141.6

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc-------------------------------
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT-------------------------------   55 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------------   55 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++..........                               
T Consensus        75 ~~~E~~~l~~l~hpniv~---~~~~~~~~~~~-~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (345)
T 3hko_A           75 IKTEVRLMKKLHHPNIAR---LYEVYEDEQYI-CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI  150 (345)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCcce---eehhhccCCeE-EEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccc
Confidence            345999999999999999   88888776653 3444443332111110                               


Q ss_pred             -----------cCCCCHHHHHHHHHHHHHhh-ccC-----------CCceeeCCCC--cEEEeecCccccCCCCc-----
Q psy323           56 -----------RSSFSLTTFSKYVKQISQFV-YMN-----------EELLYPTQNI--EIVITDLEYVRPENDET-----  105 (255)
Q Consensus        56 -----------~~~l~~~~~~~~~~qll~~l-ylH-----------~niLl~~~~~--~~kl~DfG~a~~~~~~~-----  105 (255)
                                 ...+++..++.++.|++.|| |||           +||++. .++  .+||+|||+++.+....     
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~-~~~~~~~kl~Dfg~a~~~~~~~~~~~~  229 (345)
T 3hko_A          151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFS-TNKSFEIKLVDFGLSKEFYKLNNGEYY  229 (345)
T ss_dssp             HSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES-CSSSCCEEECCCTTCEEGGGTTCC---
T ss_pred             ccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe-cCCCceEEEeeccccccccccCccccc
Confidence                       12357888999999999999 998           789984 444  89999999998653311     


Q ss_pred             ccccccc-ccccchhhhhc--CCCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhh
Q psy323          106 ICREDIH-RQYKAVELIYT--KEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNE  182 (255)
Q Consensus       106 ~~~~~~~-~~y~aPE~l~~--~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~  182 (255)
                      ......+ +.|+|||++.+  ..++.++||||+||++++|++|+.||.+..      ..+.+..+.......+..     
T Consensus       230 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~-----  298 (345)
T 3hko_A          230 GMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN------DADTISQVLNKKLCFENP-----  298 (345)
T ss_dssp             -----CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCTTSG-----
T ss_pred             cccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------hHHHHHHHHhcccccCCc-----
Confidence            1233445 89999999986  478899999999999999999999998654      333333333211111000     


Q ss_pred             hhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          183 RCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                                                         .....+.++.+||.+||+.||.+|||+.++++||||++
T Consensus       299 -----------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~  336 (345)
T 3hko_A          299 -----------------------------------NYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ  336 (345)
T ss_dssp             -----------------------------------GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred             -----------------------------------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhcc
Confidence                                               00234678899999999999999999999999999964


No 109
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97  E-value=9.9e-32  Score=224.59  Aligned_cols=225  Identities=16%  Similarity=0.300  Sum_probs=151.7

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhh-------------hhhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHh
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKK-------------LLLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQF   74 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~-------------~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~   74 (255)
                      .+|+++++.+.|+||++   +.+++...+             ..++.++++...........+.+++..++.++.|++.|
T Consensus        56 ~~e~~~l~~l~h~~iv~---~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~  132 (320)
T 2i6l_A           56 LREIKIIRRLDHDNIVK---VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRG  132 (320)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCeeE---EEEeccccccccccccccccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHH
Confidence            45899999999999999   766653321             11233334333322233344679999999999999999


Q ss_pred             h-ccC-----------CCceeeCCCCcEEEeecCccccCCCCc----ccccccc-ccccchhhhhc-CCCCCchhHHHHH
Q psy323           75 V-YMN-----------EELLYPTQNIEIVITDLEYVRPENDET----ICREDIH-RQYKAVELIYT-KEFDMKIDIWSTA  136 (255)
Q Consensus        75 l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~----~~~~~~~-~~y~aPE~l~~-~~~~~~~DiwSlG  136 (255)
                      | |||           +||++...++.+||+|||+++......    ......+ +.|+|||.+.+ ..++.++||||+|
T Consensus       133 l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  212 (320)
T 2i6l_A          133 LKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAG  212 (320)
T ss_dssp             HHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHH
T ss_pred             HHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHH
Confidence            9 998           799996567899999999998765421    1222334 88999999987 4789999999999


Q ss_pred             HHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhc
Q psy323          137 CLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSY  216 (255)
Q Consensus       137 ~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (255)
                      |++++|++|+.||.+..      ..+.+..+......+...........  +..+.....   .  .+..+...      
T Consensus       213 ~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~--~~~~~~~~------  273 (320)
T 2i6l_A          213 CIFAEMLTGKTLFAGAH------ELEQMQLILESIPVVHEEDRQELLSV--IPVYIRNDM---T--EPHKPLTQ------  273 (320)
T ss_dssp             HHHHHHHHSSCSSCCSS------HHHHHHHHHHHSCCCCHHHHHHHHTT--SCHHHHHHT---T--SCCCCHHH------
T ss_pred             HHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCchhhhhhhhhc--Ccccccccc---c--CCCCChhH------
Confidence            99999999999998654      45566666665555444332211100  000100000   0  00000000      


Q ss_pred             CCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          217 KIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       217 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                       .....+.++.+|+.+||+.||++|||++++++||||++
T Consensus       274 -~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (320)
T 2i6l_A          274 -LLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI  311 (320)
T ss_dssp             -HSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHT
T ss_pred             -hcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccc
Confidence             11245788999999999999999999999999999964


No 110
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97  E-value=5.5e-32  Score=234.21  Aligned_cols=198  Identities=12%  Similarity=0.173  Sum_probs=148.7

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc---cCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT---RSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|..++..+.|++|++   +..++...+.+ +.++++..........   ...+++..++.++.|++.|| |||    
T Consensus       108 ~~~E~~il~~~~hp~Iv~---l~~~~~~~~~~-~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi  183 (412)
T 2vd5_A          108 FREERDVLVNGDRRWITQ---LHFAFQDENYL-YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY  183 (412)
T ss_dssp             HHHHHHHHHHSCTTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHhcCCCCeee---EEEEEeeCCEE-EEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            446899999999999999   88888776664 6666666544332222   24799999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCccc--ccccc-ccccchhhhhc-------CCCCCchhHHHHHHHHHH
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETIC--REDIH-RQYKAVELIYT-------KEFDMKIDIWSTACLTFE  141 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~--~~~~~-~~y~aPE~l~~-------~~~~~~~DiwSlG~il~~  141 (255)
                             +|||+ +.++++||+|||+|+........  ...++ +.|+|||++.+       ..|+.++|+||+||++|+
T Consensus       184 iHrDLKp~NILl-d~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilye  262 (412)
T 2vd5_A          184 VHRDIKPDNILL-DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYE  262 (412)
T ss_dssp             ECCCCSGGGEEE-CTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHH
T ss_pred             eecccCHHHeee-cCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHH
Confidence                   79999 58899999999999877653222  23456 99999999983       468899999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChh
Q psy323          142 LVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKE  221 (255)
Q Consensus       142 l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
                      |++|+.||.+.+      ..+....+...-...          .             .   +             ..+..
T Consensus       263 lltG~~Pf~~~~------~~~~~~~i~~~~~~~----------~-------------~---p-------------~~~~~  297 (412)
T 2vd5_A          263 MFYGQTPFYADS------TAETYGKIVHYKEHL----------S-------------L---P-------------LVDEG  297 (412)
T ss_dssp             HHHSSCTTCCSS------HHHHHHHHHTHHHHC----------C-------------C---C-----------------C
T ss_pred             HHhCCCCCCCCC------HHHHHHHHHhcccCc----------C-------------C---C-------------ccccC
Confidence            999999998654      333333433211000          0             0   0             01134


Q ss_pred             hHHHHHHHHHhccccCCCCC---CCHHHHhcCcCCCC
Q psy323          222 DAKQLVRFLIPMLRLNPNKR---ETAEQCLQNEWLIK  255 (255)
Q Consensus       222 ~~~~~~~li~~~L~~dP~~R---~t~~e~l~hp~~~~  255 (255)
                      .+.++.+||.+||. +|.+|   ++++++++||||++
T Consensus       298 ~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~  333 (412)
T 2vd5_A          298 VPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG  333 (412)
T ss_dssp             CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred             CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence            56889999999999 99998   58999999999974


No 111
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.97  E-value=6.1e-32  Score=222.19  Aligned_cols=192  Identities=18%  Similarity=0.309  Sum_probs=144.1

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.....  ........+++..+..++.|++.|| |||     
T Consensus        56 ~~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~  131 (279)
T 3fdn_A           56 LRREVEIQSHLRHPNILR---LYGYFHDATRV-YLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI  131 (279)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEECSSEE-EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             HHHHHHHHHcCCCCCCcc---hhheEecCCEE-EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence            345899999999999999   88888776653 45555544322  1222236799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                            +||++ +.++.+||+|||++...... ......+ +.|+|||++.+..++.++||||+|+++++|++|..||.+
T Consensus       132 H~dlkp~Nili-~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  209 (279)
T 3fdn_A          132 HRDIKPENLLL-GSAGELKIADFGWSVHAPSS-RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA  209 (279)
T ss_dssp             ECCCCGGGEEE-CTTSCEEECSCCEESCC---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cccCChHhEEE-cCCCCEEEEeccccccCCcc-cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC
Confidence                  68888 58889999999998765442 2233455 999999999998889999999999999999999999985


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      ..+....+.....                                            ..+...+..+.+|+.
T Consensus       210 ~~------~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~li~  239 (279)
T 3fdn_A          210 NT------YQETYKRISRVEF--------------------------------------------TFPDFVTEGARDLIS  239 (279)
T ss_dssp             SS------HHHHHHHHHHTCC--------------------------------------------CCCTTSCHHHHHHHH
T ss_pred             Cc------HHHHHHHHHhCCC--------------------------------------------CCCCcCCHHHHHHHH
Confidence            43      2222222211100                                            122345678899999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      +||+.||++|||++++++||||+
T Consensus       240 ~~l~~~p~~Rps~~e~l~h~~~~  262 (279)
T 3fdn_A          240 RLLKHNPSQRPMLREVLEHPWIT  262 (279)
T ss_dssp             HHCCSSGGGSCCHHHHHHCHHHH
T ss_pred             HHhccChhhCCCHHHHhhCcccc
Confidence            99999999999999999999986


No 112
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.97  E-value=1.7e-31  Score=223.13  Aligned_cols=182  Identities=14%  Similarity=0.143  Sum_probs=131.6

Q ss_pred             hhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC-----------CCce
Q psy323           17 MFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN-----------EELL   82 (255)
Q Consensus        17 ~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH-----------~niL   82 (255)
                      ..|+||++   +.+++...+.+ +.++++.......  ......+++..++.++.|++.|| |||           +|||
T Consensus       114 ~~h~~iv~---l~~~~~~~~~~-~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl  189 (311)
T 3p1a_A          114 GQHPCCVR---LEQAWEEGGIL-YLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIF  189 (311)
T ss_dssp             CCCTTBCC---EEEEEEETTEE-EEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             cCCCcEEE---EEEEEEeCCEE-EEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEE
Confidence            38999998   78777766553 3444443322111  11235699999999999999999 998           7899


Q ss_pred             eeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccH
Q psy323           83 YPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDE  161 (255)
Q Consensus        83 l~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~  161 (255)
                      + +.++.+||+|||++.............+ +.|+|||++.+ .++.++||||+||++++|++|..++.+         .
T Consensus       190 l-~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~---------~  258 (311)
T 3p1a_A          190 L-GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG---------G  258 (311)
T ss_dssp             E-CGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS---------H
T ss_pred             E-CCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC---------c
Confidence            9 5788999999999988766444444556 99999999886 689999999999999999999776652         1


Q ss_pred             HHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCC
Q psy323          162 HHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKR  241 (255)
Q Consensus       162 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  241 (255)
                      .....+..  +..+..                                        .+...+.++.+|+.+||++||++|
T Consensus       259 ~~~~~~~~--~~~~~~----------------------------------------~~~~~~~~l~~li~~~L~~dP~~R  296 (311)
T 3p1a_A          259 EGWQQLRQ--GYLPPE----------------------------------------FTAGLSSELRSVLVMMLEPDPKLR  296 (311)
T ss_dssp             HHHHHHTT--TCCCHH----------------------------------------HHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             cHHHHHhc--cCCCcc----------------------------------------cccCCCHHHHHHHHHHcCCChhhC
Confidence            22211111  111110                                        012356889999999999999999


Q ss_pred             CCHHHHhcCcCCCC
Q psy323          242 ETAEQCLQNEWLIK  255 (255)
Q Consensus       242 ~t~~e~l~hp~~~~  255 (255)
                      ||++++++||||++
T Consensus       297 pt~~ell~hp~~~~  310 (311)
T 3p1a_A          297 ATAEALLALPVLRQ  310 (311)
T ss_dssp             CCHHHHHTSGGGSC
T ss_pred             cCHHHHHhCccccC
Confidence            99999999999985


No 113
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.97  E-value=7.9e-32  Score=221.75  Aligned_cols=197  Identities=17%  Similarity=0.304  Sum_probs=143.9

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.......  ......+++..+..++.|++.|| |||     
T Consensus        55 ~~~E~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  130 (283)
T 3bhy_A           55 IEREVNILREIRHPNIIT---LHDIFENKTDV-VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIA  130 (283)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhCCCCCeee---hhheecCCCeE-EEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            346899999999999999   88887766553 4444444332221  22245799999999999999999 998     


Q ss_pred             ------CCceeeCCCC----cEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCC
Q psy323           79 ------EELLYPTQNI----EIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY  147 (255)
Q Consensus        79 ------~niLl~~~~~----~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~  147 (255)
                            +||++. .++    .+||+|||++.............+ +.|+|||++.+..++.++||||+|+++++|++|..
T Consensus       131 H~dl~p~Nil~~-~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  209 (283)
T 3bhy_A          131 HFDLKPENIMLL-DKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS  209 (283)
T ss_dssp             CSCCSGGGEEES-CSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCChHHEEEe-cCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCC
Confidence                  688884 444    899999999988766444445556 99999999998899999999999999999999999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+..      ..+.+..+.......+...                                        ....+..+.
T Consensus       210 p~~~~~------~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~  243 (283)
T 3bhy_A          210 PFLGET------KQETLTNISAVNYDFDEEY----------------------------------------FSNTSELAK  243 (283)
T ss_dssp             TTCCSS------HHHHHHHHHTTCCCCCHHH----------------------------------------HTTCCHHHH
T ss_pred             CCCCcc------hHHHHHHhHhcccCCcchh----------------------------------------cccCCHHHH
Confidence            998643      2233322221111111100                                        023457889


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      +++.+||..||++|||+.++++||||+
T Consensus       244 ~li~~~l~~dp~~Rps~~~~l~h~~~~  270 (283)
T 3bhy_A          244 DFIRRLLVKDPKRRMTIAQSLEHSWIK  270 (283)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHCHHHH
T ss_pred             HHHHHHccCCHhHCcCHHHHHhCHHHH
Confidence            999999999999999999999999986


No 114
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.96  E-value=1.1e-31  Score=227.83  Aligned_cols=192  Identities=14%  Similarity=0.197  Sum_probs=143.9

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+++++.+.|+||++   +.+++...+.. +.++++..+.....  .....+++..++.++.|++.|| |||     
T Consensus       101 ~~~E~~~l~~l~hpniv~---~~~~~~~~~~~-~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv  176 (348)
T 1u5q_A          101 IIKEVRFLQKLRHPNTIQ---YRGCYLREHTA-WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI  176 (348)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEEETTEE-EEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred             HHHHHHHHHhCCCCCEee---EEEEEEECCeE-EEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            346999999999999999   88887766552 33444433211111  1246799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhh---cCCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIY---TKEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~---~~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                            +|||+ +.++.+||+|||+++.....   ...++ +.|+|||++.   +..++.++||||+||++++|++|..|
T Consensus       177 H~Dlkp~NIll-~~~~~~kL~DfG~a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  252 (348)
T 1u5q_A          177 HRDVKAGNILL-SEPGLVKLGDFGSASIMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP  252 (348)
T ss_dssp             CCCCSGGGEEE-ETTTEEEECCCTTCBSSSSB---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             eCCCCHHHEEE-CCCCCEEEeeccCceecCCC---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                  78999 48889999999999876542   23456 9999999996   34788999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+.+      ....+..+...  ..+                         ..               .+...+..+.+
T Consensus       253 ~~~~~------~~~~~~~~~~~--~~~-------------------------~~---------------~~~~~~~~l~~  284 (348)
T 1u5q_A          253 LFNMN------AMSALYHIAQN--ESP-------------------------AL---------------QSGHWSEYFRN  284 (348)
T ss_dssp             TTTSC------HHHHHHHHHHS--CCC-------------------------CC---------------CCTTSCHHHHH
T ss_pred             CCCCC------hHHHHHHHHhc--CCC-------------------------CC---------------CCCCCCHHHHH
Confidence            97543      22333222211  000                         00               11234578899


Q ss_pred             HHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      ||.+||+.||++|||++++++||||.
T Consensus       285 li~~~l~~dP~~Rps~~~ll~h~~~~  310 (348)
T 1u5q_A          285 FVDSCLQKIPQDRPTSEVLLKHRFVL  310 (348)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHHcccChhhCcCHHHHhhChhhh
Confidence            99999999999999999999999985


No 115
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.96  E-value=2.6e-32  Score=227.17  Aligned_cols=203  Identities=13%  Similarity=0.108  Sum_probs=133.0

Q ss_pred             hhHHHhhhhhhHHHHHHHHHHHHhhhhh---hhhhhcCCCCCCCC-cccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323           10 DVKVMENMFVDAIIARIWIKAVMKKKKL---LLKEILPIQPPHQH-KNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus        10 e~~~l~~~~h~~iv~~~~l~~~~~~~~~---~~~~~~~~~~~l~~-~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      |+..+..++||||++   +++++...+.   -++.+++++..... ..+....++++.+..++.|++.|| |||      
T Consensus        47 Ei~~~~~l~HpNIv~---l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~  123 (303)
T 3hmm_A           47 EIYQTVMLRHENILG---FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT  123 (303)
T ss_dssp             HHHTSTTCCCTTBCC---EEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCST
T ss_pred             HHHHHhcCCCCCCCc---EEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            555556789999999   8888876542   13455555554332 233456799999999999999999 987      


Q ss_pred             -------------CCceeeCCCCcEEEeecCccccCCCCcc-----cccccc-ccccchhhhhcC------CCCCchhHH
Q psy323           79 -------------EELLYPTQNIEIVITDLEYVRPENDETI-----CREDIH-RQYKAVELIYTK------EFDMKIDIW  133 (255)
Q Consensus        79 -------------~niLl~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~-~~y~aPE~l~~~------~~~~~~Diw  133 (255)
                                   +|||+ +.++.+||+|||+|+.......     ....++ +.|||||++.+.      .|+.++|||
T Consensus       124 ~~~~~IiHRDlKp~NILl-~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVw  202 (303)
T 3hmm_A          124 QGKPAIAHRDLKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  202 (303)
T ss_dssp             TCBCCEECSCCCGGGEEE-CTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHH
T ss_pred             cCCCCEeeccCCcccEEE-CCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhh
Confidence                         57888 5889999999999987654221     123456 999999999865      356799999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCcc-----HHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccH
Q psy323          134 STACLTFELVTGDYMFNPFESKYYTID-----EHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNF  208 (255)
Q Consensus       134 SlG~il~~l~~g~~pf~~~~~~~~~~~-----~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (255)
                      |+||++|||++|.+||...........     ......+......        ....              +.++..+  
T Consensus       203 S~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~~r--------------p~~p~~~--  258 (303)
T 3hmm_A          203 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE--------QKLR--------------PNIPNRW--  258 (303)
T ss_dssp             HHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT--------SCCC--------------CCCCGGG--
T ss_pred             hHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhc--------ccCC--------------CCCCccc--
Confidence            999999999999887753321110000     0001111111100        0000              0000000  


Q ss_pred             HHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          209 YRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                               ........+.+|+.+||+.||++|||+.|+++
T Consensus       259 ---------~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          259 ---------QSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             ---------GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             ---------cchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence                     01235678899999999999999999999875


No 116
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.96  E-value=4.9e-31  Score=218.59  Aligned_cols=197  Identities=17%  Similarity=0.260  Sum_probs=146.8

Q ss_pred             CchhHHHhhhh-hhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMF-VDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~-h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+. |+||++   +.+++...+.. +.++++.......  ......+++..++.++.|++.|| |||     
T Consensus        71 ~~e~~~l~~l~~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  146 (298)
T 1phk_A           71 LKEVDILRKVSGHPNIIQ---LKDTYETNTFF-FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIV  146 (298)
T ss_dssp             HHHHHHHHHHTTCTTBCC---EEEEEECSSEE-EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhcCCCCEee---eeeeeccCCeE-EEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            35888999995 999999   88887766553 4444444332221  12235799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhh------cCCCCCchhHHHHHHHHHHHhhC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIY------TKEFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~------~~~~~~~~DiwSlG~il~~l~~g  145 (255)
                            +||++ +.++.+||+|||++.............+ +.|+|||++.      ...++.++||||+|+++++|++|
T Consensus       147 H~dl~p~Nil~-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g  225 (298)
T 1phk_A          147 HRDLKPENILL-DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG  225 (298)
T ss_dssp             CSCCSGGGEEE-CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             cCCCCcceEEE-cCCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHC
Confidence                  68888 5888999999999988766544555566 9999999986      33678899999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      ..||.+.+      .......+.......+.                           +             .....+.+
T Consensus       226 ~~p~~~~~------~~~~~~~~~~~~~~~~~---------------------------~-------------~~~~~~~~  259 (298)
T 1phk_A          226 SPPFWHRK------QMLMLRMIMSGNYQFGS---------------------------P-------------EWDDYSDT  259 (298)
T ss_dssp             SCSSCCSS------HHHHHHHHHHTCCCCCT---------------------------T-------------TGGGSCHH
T ss_pred             CCCCcCcc------HHHHHHHHhcCCcccCc---------------------------c-------------cccccCHH
Confidence            99997543      22222222221111100                           0             01245678


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+++.+||+.||++|||+.++++||||++
T Consensus       260 l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (298)
T 1phk_A          260 VKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  289 (298)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             HHHHHHHHccCCcccCCCHHHHHhChHhhh
Confidence            899999999999999999999999999975


No 117
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.96  E-value=3.2e-31  Score=242.51  Aligned_cols=192  Identities=14%  Similarity=0.197  Sum_probs=148.0

Q ss_pred             chhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            9 PDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         9 ~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .|..++..+ .|++|+.   +...+...+.+ +.++++.......  ....+.+++..++.|+.|++.|| |||      
T Consensus       390 ~E~~~l~~~~~~~~i~~---l~~~~~~~~~~-~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiH  465 (674)
T 3pfq_A          390 VEKRVLALPGKPPFLTQ---LHSCFQTMDRL-YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY  465 (674)
T ss_dssp             HHHHHHTCTTCCTTBCC---EEEECBCSSEE-EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEEC
T ss_pred             HHHHHHHhccCCCeEEE---EEEEEEeCCEE-EEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence            367777776 6888888   77777766653 5555555443222  22236799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCC-Ccccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPEND-ETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~-~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +|||+ +.++.+||+|||+|+.... .......++ +.|+|||++.+..|+.++||||+||++|+|++|++||.+
T Consensus       466 rDLKp~NILl-~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~  544 (674)
T 3pfq_A          466 RDLKLDNVML-DSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG  544 (674)
T ss_dssp             CCCCSTTEEE-CSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCChhhEEE-cCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC
Confidence                 89999 5889999999999986433 223444566 999999999999999999999999999999999999986


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      .+      ..+....|...                                            ....|...+.++.+||.
T Consensus       545 ~~------~~~~~~~i~~~--------------------------------------------~~~~p~~~s~~~~~li~  574 (674)
T 3pfq_A          545 ED------EDELFQSIMEH--------------------------------------------NVAYPKSMSKEAVAICK  574 (674)
T ss_dssp             SS------HHHHHHHHHSS--------------------------------------------CCCCCTTSCHHHHHHHH
T ss_pred             CC------HHHHHHHHHhC--------------------------------------------CCCCCccCCHHHHHHHH
Confidence            54      33333333210                                            11133456789999999


Q ss_pred             hccccCCCCCCCH-----HHHhcCcCCCC
Q psy323          232 PMLRLNPNKRETA-----EQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~-----~e~l~hp~~~~  255 (255)
                      +||+.||++|+++     +++++||||++
T Consensus       575 ~lL~~dP~~R~~~~~~~~~ei~~h~ff~~  603 (674)
T 3pfq_A          575 GLMTKHPGKRLGCGPEGERDIKEHAFFRY  603 (674)
T ss_dssp             HHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred             HHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence            9999999999997     99999999974


No 118
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.96  E-value=4.2e-31  Score=218.36  Aligned_cols=196  Identities=12%  Similarity=0.249  Sum_probs=141.3

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhh---hhhhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKK---KLLLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~---~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+.+++.+.|+||++   +++++...   +..++.++++........  ...+.+++..++.++.|++.|| |||   
T Consensus        73 ~~e~~~l~~l~h~~iv~---~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  149 (290)
T 1t4h_A           73 KEEAEMLKGLQHPNIVR---FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT  149 (290)
T ss_dssp             HHHHHHHTTCCCTTBCC---EEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHhCCCCCeee---eeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            45899999999999999   77766542   122244455544322222  2236799999999999999999 998   


Q ss_pred             ----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCC
Q psy323           79 ----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY  147 (255)
Q Consensus        79 ----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~  147 (255)
                                +||++...++.+||+|||++...... ......+ +.|+|||++.+ .++.++||||+||++++|++|+.
T Consensus       150 ~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~  227 (290)
T 1t4h_A          150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEY  227 (290)
T ss_dssp             SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc-ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCC
Confidence                      47788546889999999999765542 2233445 99999998875 58999999999999999999999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+..      ....+...... +..+..                                        .+...++++.
T Consensus       228 pf~~~~------~~~~~~~~~~~-~~~~~~----------------------------------------~~~~~~~~l~  260 (290)
T 1t4h_A          228 PYSECQ------NAAQIYRRVTS-GVKPAS----------------------------------------FDKVAIPEVK  260 (290)
T ss_dssp             TTTTCS------SHHHHHHHHTT-TCCCGG----------------------------------------GGGCCCHHHH
T ss_pred             CCCCcC------cHHHHHHHHhc-cCCccc----------------------------------------cCCCCCHHHH
Confidence            997543      22222211110 000000                                        1123347889


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +++.+||+.||++|||++++++||||++
T Consensus       261 ~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          261 EIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHccCChhhCCCHHHHhhCccccc
Confidence            9999999999999999999999999985


No 119
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.96  E-value=7.1e-32  Score=221.58  Aligned_cols=194  Identities=19%  Similarity=0.310  Sum_probs=126.1

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.........   ....+++..++.++.|++.|| |||    
T Consensus        58 ~~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  133 (278)
T 3cok_A           58 VQNEVKIHCQLKHPSILE---LYNYFEDSNYV-YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI  133 (278)
T ss_dssp             HHHHHHHHTTBCCTTBCC---EEEEEECSSEE-EEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHhCCCCCeEe---EEEEEccCCeE-EEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345899999999999999   88887776553 444444433221111   125699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                             +||++ +.++.+||+|||++....... ......+ +.|+|||++.+..++.++||||+||++++|++|+.||
T Consensus       134 ~H~dl~p~Nili-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  212 (278)
T 3cok_A          134 LHRDLTLSNLLL-TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF  212 (278)
T ss_dssp             ECSSCCGGGEEE-CTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSS
T ss_pred             ecCCCCHHHEEE-cCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                   68888 578899999999998765421 2223345 8999999999888899999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+....      ..+..+   ..                                         ..+..+...+.++.++
T Consensus       213 ~~~~~~------~~~~~~---~~-----------------------------------------~~~~~~~~~~~~~~~l  242 (278)
T 3cok_A          213 DTDTVK------NTLNKV---VL-----------------------------------------ADYEMPSFLSIEAKDL  242 (278)
T ss_dssp             CCCSCC-----------C---CS-----------------------------------------SCCCCCTTSCHHHHHH
T ss_pred             CChhHH------HHHHHH---hh-----------------------------------------cccCCccccCHHHHHH
Confidence            754311      111000   00                                         0001223456788999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+||+.||++|||++++++||||++
T Consensus       243 i~~~l~~dp~~Rps~~~~l~h~~~~~  268 (278)
T 3cok_A          243 IHQLLRRNPADRLSLSSVLDHPFMSR  268 (278)
T ss_dssp             HHHHSCSSGGGSCCHHHHTTSTTTC-
T ss_pred             HHHHcccCHhhCCCHHHHhcCccccC
Confidence            99999999999999999999999974


No 120
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.96  E-value=2.5e-31  Score=223.05  Aligned_cols=198  Identities=20%  Similarity=0.302  Sum_probs=143.5

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCC--CCCcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPP--HQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++.....  +.++++...  +.........+++..++.++.|++.|| |||     
T Consensus        62 ~~~E~~~l~~l~h~~i~~---~~~~~~~~~~--~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  136 (322)
T 2ycf_A           62 VETEIEILKKLNHPCIIK---IKNFFDAEDY--YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII  136 (322)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEESSSE--EEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhCCCCCCce---EeeEEcCCce--EEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            456999999999999999   8877765543  344444433  222222345799999999999999999 998     


Q ss_pred             ------CCceeeCCCC---cEEEeecCccccCCCCcccccccc-ccccchhhhh---cCCCCCchhHHHHHHHHHHHhhC
Q psy323           79 ------EELLYPTQNI---EIVITDLEYVRPENDETICREDIH-RQYKAVELIY---TKEFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 ------~niLl~~~~~---~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~---~~~~~~~~DiwSlG~il~~l~~g  145 (255)
                            +||++. .++   .+||+|||+++............+ +.|+|||++.   +..++.++||||+||++++|++|
T Consensus       137 H~dlkp~NIl~~-~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g  215 (322)
T 2ycf_A          137 HRDLKPENVLLS-SQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG  215 (322)
T ss_dssp             CCCCSGGGEEES-SSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHS
T ss_pred             ccCCCHHHEEEe-cCCCCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhC
Confidence                  789985 433   599999999988766433344456 8999999985   34688999999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      ..||.+.....     .....+...........                                        ....+.+
T Consensus       216 ~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~  250 (322)
T 2ycf_A          216 YPPFSEHRTQV-----SLKDQITSGKYNFIPEV----------------------------------------WAEVSEK  250 (322)
T ss_dssp             SCSSCSTTCSS-----CHHHHHHHTCCCCCHHH----------------------------------------HTTSCHH
T ss_pred             CCCCcccchHH-----HHHHHHHhCccccCchh----------------------------------------hhhcCHH
Confidence            99997543211     11111111100000000                                        0234678


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+|+.+||+.||++|||++++++||||++
T Consensus       251 ~~~li~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          251 ALDLVKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             HHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence            899999999999999999999999999974


No 121
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.96  E-value=1.9e-31  Score=219.72  Aligned_cols=192  Identities=17%  Similarity=0.320  Sum_probs=146.3

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.....  ......+.+++..+..++.|++.|| |||     
T Consensus        61 ~~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  136 (284)
T 2vgo_A           61 LRREIEIQSHLRHPNILR---MYNYFHDRKRI-YLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVI  136 (284)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEEECSSEE-EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHHhcCCCCCEee---EEEEEEcCCEE-EEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            345899999999999999   88887766553 45555554322  1122235699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                            +||++ +.++.+||+|||++...... ......+ +.|+|||++.+..++.++||||+|+++++|++|..||.+
T Consensus       137 H~dl~p~Nil~-~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  214 (284)
T 2vgo_A          137 HRDIKPENLLM-GYKGELKIADFGWSVHAPSL-RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS  214 (284)
T ss_dssp             CCCCSGGGEEE-CTTCCEEECCCTTCEECSSS-CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ecCCCHHHEEE-cCCCCEEEecccccccCccc-ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence                  68888 57889999999998766542 2233445 999999999998899999999999999999999999975


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      ..      ..+....+...                                            ....+...+.++.+++.
T Consensus       215 ~~------~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~li~  244 (284)
T 2vgo_A          215 PS------HTETHRRIVNV--------------------------------------------DLKFPPFLSDGSKDLIS  244 (284)
T ss_dssp             SS------HHHHHHHHHTT--------------------------------------------CCCCCTTSCHHHHHHHH
T ss_pred             CC------HhHHHHHHhcc--------------------------------------------ccCCCCcCCHHHHHHHH
Confidence            43      22222222110                                            00122345678899999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      +||+.||.+|||++++++||||+
T Consensus       245 ~~l~~~p~~Rps~~~ll~h~~~~  267 (284)
T 2vgo_A          245 KLLRYHPPQRLPLKGVMEHPWVK  267 (284)
T ss_dssp             HHSCSSGGGSCCHHHHHTCHHHH
T ss_pred             HHhhcCHhhCCCHHHHhhCHHHH
Confidence            99999999999999999999985


No 122
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.96  E-value=1.9e-31  Score=221.95  Aligned_cols=197  Identities=21%  Similarity=0.359  Sum_probs=147.6

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC--cccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH--KNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++......  .....+.+++..+..++.|++.|| |||     
T Consensus        53 ~~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  128 (304)
T 2jam_A           53 LENEIAVLKKIKHENIVT---LEDIYESTTHY-YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIV  128 (304)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhCCCCCeee---hhhhcccCCEE-EEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            446999999999999999   88877766553 455555443222  222346799999999999999999 998     


Q ss_pred             ------CCceee--CCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 ------EELLYP--TQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 ------~niLl~--~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                            +||++.  +.++.+||+|||++...... ......+ +.|+|||++.+..++.++||||+||++++|++|..||
T Consensus       129 H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  207 (304)
T 2jam_A          129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF  207 (304)
T ss_dssp             CCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence                  688883  35678999999999765542 2233345 8999999999889999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+..      .......+.+.....+.                                        ......+.++.+|
T Consensus       208 ~~~~------~~~~~~~i~~~~~~~~~----------------------------------------~~~~~~~~~~~~l  241 (304)
T 2jam_A          208 YEET------ESKLFEKIKEGYYEFES----------------------------------------PFWDDISESAKDF  241 (304)
T ss_dssp             TTSC------HHHHHHHHHHCCCCCCT----------------------------------------TTTTTSCHHHHHH
T ss_pred             CCCC------HHHHHHHHHcCCCCCCc----------------------------------------cccccCCHHHHHH
Confidence            7543      22333333221111100                                        0113456789999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      +.+||+.||++|||++++++||||+
T Consensus       242 i~~~l~~dp~~Rps~~~~l~h~~~~  266 (304)
T 2jam_A          242 ICHLLEKDPNERYTCEKALSHPWID  266 (304)
T ss_dssp             HHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHHcCCChhHCcCHHHHhcCcccc
Confidence            9999999999999999999999985


No 123
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.96  E-value=4.9e-31  Score=222.58  Aligned_cols=193  Identities=18%  Similarity=0.336  Sum_probs=147.5

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+.+++.+.|+||++   +++++...+.. +.++++........  .....+++..+..++.|++.|| |||      
T Consensus        89 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  164 (335)
T 2owb_A           89 SMEISIHRSLAHQHVVG---FHGFFEDNDFV-FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH  164 (335)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEECSSEE-EEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHhCCCCCCCe---EEEEEecCCeE-EEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Confidence            45899999999999999   88888776653 55555554322221  2236799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +||++ +.++.+||+|||++....... ......+ +.|+|||++.+..++.++||||+||++++|++|+.||.+
T Consensus       165 ~dlkp~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  243 (335)
T 2owb_A          165 RDLKLGNLFL-NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  243 (335)
T ss_dssp             SCCCGGGEEE-CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCCchhEEE-cCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence                 78888 578899999999998765422 2233445 899999999998899999999999999999999999975


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      ..      ..+....+...                                            ....+...+.++.+|+.
T Consensus       244 ~~------~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~li~  273 (335)
T 2owb_A          244 SC------LKETYLRIKKN--------------------------------------------EYSIPKHINPVAASLIQ  273 (335)
T ss_dssp             SS------HHHHHHHHHHT--------------------------------------------CCCCCTTSCHHHHHHHH
T ss_pred             CC------HHHHHHHHhcC--------------------------------------------CCCCCccCCHHHHHHHH
Confidence            43      12222211110                                            00123345678899999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||+.||++|||++++++||||++
T Consensus       274 ~~l~~dp~~Rps~~ell~~~~~~~  297 (335)
T 2owb_A          274 KMLQTDPTARPTINELLNDEFFTS  297 (335)
T ss_dssp             HHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred             HHccCChhHCcCHHHHhcCccccC
Confidence            999999999999999999999863


No 124
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.96  E-value=1.1e-30  Score=214.16  Aligned_cols=196  Identities=14%  Similarity=0.199  Sum_probs=143.4

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCC--CCCcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPP--HQHKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++...  +.........+++..+..++.|++.|| |||      
T Consensus        53 ~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H  128 (276)
T 2yex_A           53 KKEICINKMLNHENVVK---FYGHRREGNIQ-YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH  128 (276)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEEETTEE-EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHhcCCCCcee---eeeEEEcCCEE-EEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            45899999999999999   88877765553 344444433  222222235699999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCc---ccccccc-ccccchhhhhcCCC-CCchhHHHHHHHHHHHhhCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDET---ICREDIH-RQYKAVELIYTKEF-DMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~---~~~~~~~-~~y~aPE~l~~~~~-~~~~DiwSlG~il~~l~~g~~p  148 (255)
                           +||++ +.++.+||+|||.+.......   ......+ +.|+|||++.+..+ +.++||||+||++++|++|..|
T Consensus       129 ~dl~p~Nil~-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p  207 (276)
T 2yex_A          129 RDIKPENLLL-DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP  207 (276)
T ss_dssp             SCCSGGGEEE-CTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCC
T ss_pred             cCCChHHEEE-ccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCC
Confidence                 68888 578899999999998664321   2233445 89999999988765 6799999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+....     ......+..   ...               .          . +             .....+..+.+
T Consensus       208 ~~~~~~~-----~~~~~~~~~---~~~---------------~----------~-~-------------~~~~~~~~~~~  240 (276)
T 2yex_A          208 WDQPSDS-----CQEYSDWKE---KKT---------------Y----------L-N-------------PWKKIDSAPLA  240 (276)
T ss_dssp             CSCSCTT-----SHHHHHHHT---TCT---------------T----------S-T-------------TGGGSCHHHHH
T ss_pred             CCCCchH-----HHHHHHhhh---ccc---------------c----------c-C-------------chhhcCHHHHH
Confidence            9864421     111111110   000               0          0 0             01235678889


Q ss_pred             HHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ++.+||+.||++|||++++++||||++
T Consensus       241 li~~~l~~~p~~Rps~~~il~~~~~~~  267 (276)
T 2yex_A          241 LLHKILVENPSARITIPDIKKDRWYNK  267 (276)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             HHHHHCCCCchhCCCHHHHhcCccccC
Confidence            999999999999999999999999975


No 125
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.96  E-value=2.5e-31  Score=218.01  Aligned_cols=194  Identities=19%  Similarity=0.292  Sum_probs=139.3

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.......  ....+.+++..+..++.|++.|| |||     
T Consensus        58 ~~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  133 (276)
T 2h6d_A           58 IKREIQNLKLFRHPHIIK---LYQVISTPTDF-FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVV  133 (276)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             HHHHHHHHhcCCCCCEeE---EEEEEecCCeE-EEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            346899999999999999   88877766553 4444544332221  11235699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCC-CCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEF-DMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~-~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                            +||++ +.++.+||+|||++.............+ +.|+|||.+.+..+ +.++|+||+|+++++|++|..||.
T Consensus       134 H~dl~p~Nil~-~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  212 (276)
T 2h6d_A          134 HRDLKPENVLL-DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD  212 (276)
T ss_dssp             CCCCCGGGEEE-CTTSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cCCCChhhEEE-CCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence                  68888 5888999999999988766433344455 89999999998865 589999999999999999999997


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +..      .......+...  .                                          ...+...+..+.+++
T Consensus       213 ~~~------~~~~~~~~~~~--~------------------------------------------~~~~~~~~~~l~~li  242 (276)
T 2h6d_A          213 DEH------VPTLFKKIRGG--V------------------------------------------FYIPEYLNRSVATLL  242 (276)
T ss_dssp             CSS------HHHHHHHHHHC--C------------------------------------------CCCCTTSCHHHHHHH
T ss_pred             CCc------HHHHHHHhhcC--c------------------------------------------ccCchhcCHHHHHHH
Confidence            532      11111111110  0                                          012234567889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+||+.||++|||++++++||||++
T Consensus       243 ~~~l~~~p~~Rps~~~~l~h~~~~~  267 (276)
T 2h6d_A          243 MHMLQVDPLKRATIKDIREHEWFKQ  267 (276)
T ss_dssp             HHHTCSSGGGSCCHHHHHHSHHHHT
T ss_pred             HHHccCChhhCCCHHHHHhChhhcc
Confidence            9999999999999999999999964


No 126
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.96  E-value=7.3e-31  Score=219.38  Aligned_cols=203  Identities=14%  Similarity=0.194  Sum_probs=137.7

Q ss_pred             CchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC--cccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH--KNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+ .|+||++   +.+++...+.. +.++++......  .....+.+++..++.++.|++.|| |||     
T Consensus        58 ~~E~~~l~~~~~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  133 (316)
T 2ac3_A           58 FREVEMLYQCQGHRNVLE---LIEFFEEEDRF-YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA  133 (316)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEEEETTEE-EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhcCCCCeee---EEEEEeeCCEE-EEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence            3588888885 7999999   88888776653 455555443222  122235799999999999999999 998     


Q ss_pred             ------CCceeeCCCCc---EEEeecCccccCCCCc--------ccccccc-ccccchhhhhc-----CCCCCchhHHHH
Q psy323           79 ------EELLYPTQNIE---IVITDLEYVRPENDET--------ICREDIH-RQYKAVELIYT-----KEFDMKIDIWST  135 (255)
Q Consensus        79 ------~niLl~~~~~~---~kl~DfG~a~~~~~~~--------~~~~~~~-~~y~aPE~l~~-----~~~~~~~DiwSl  135 (255)
                            +||++. .++.   +||+|||++.......        .....++ +.|+|||++.+     ..++.++||||+
T Consensus       134 H~dlkp~Nil~~-~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diwsl  212 (316)
T 2ac3_A          134 HRDLKPENILCE-HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL  212 (316)
T ss_dssp             CCCCCGGGEEES-CSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHH
T ss_pred             eCCCCHHHEEEc-cCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhH
Confidence                  789985 4443   9999999987664311        1223345 89999999986     457899999999


Q ss_pred             HHHHHHHhhCCCCCCCCCCCCCCccH-----HHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHH
Q psy323          136 ACLTFELVTGDYMFNPFESKYYTIDE-----HHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYR  210 (255)
Q Consensus       136 G~il~~l~~g~~pf~~~~~~~~~~~~-----~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (255)
                      ||++++|++|+.||.+..........     .....+.....                                      
T Consensus       213 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~--------------------------------------  254 (316)
T 2ac3_A          213 GVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQ--------------------------------------  254 (316)
T ss_dssp             HHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHH--------------------------------------
T ss_pred             HHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHh--------------------------------------
Confidence            99999999999999865432110000     00000111000                                      


Q ss_pred             HHHHhcCCC----hhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          211 ILAKSYKIP----KEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       211 ~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                        ......+    ...+.++.+|+.+||+.||++|||++++++||||++
T Consensus       255 --~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  301 (316)
T 2ac3_A          255 --EGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG  301 (316)
T ss_dssp             --HCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-
T ss_pred             --ccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcC
Confidence              0000011    134678899999999999999999999999999974


No 127
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.96  E-value=4.9e-31  Score=220.95  Aligned_cols=219  Identities=13%  Similarity=0.190  Sum_probs=148.7

Q ss_pred             chhHHHhhhhhhHHHHHHHHHHHHhhhhh-hhhhhcCCCCCCCCcc-----cccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            9 PDVKVMENMFVDAIIARIWIKAVMKKKKL-LLKEILPIQPPHQHKN-----LTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~-----~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +|+++++.+.|+||++   +.+++...+. .++.++++........     .....+++..++.++.|++.|| |||   
T Consensus        56 ~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  132 (319)
T 4euu_A           56 REFEVLKKLNHKNIVK---LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG  132 (319)
T ss_dssp             HHHHHHHHCCCTTBCC---EEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCCcce---EEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5899999999999999   8877765442 2234444443322111     1223499999999999999999 998   


Q ss_pred             --------CCceee---CCCCcEEEeecCccccCCCCcccccccc-ccccchhhhh--------cCCCCCchhHHHHHHH
Q psy323           79 --------EELLYP---TQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIY--------TKEFDMKIDIWSTACL  138 (255)
Q Consensus        79 --------~niLl~---~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~--------~~~~~~~~DiwSlG~i  138 (255)
                              +|||+.   +.++.+||+|||+++............+ +.|+|||++.        +..++.++||||+||+
T Consensus       133 ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~i  212 (319)
T 4euu_A          133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT  212 (319)
T ss_dssp             EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHH
T ss_pred             EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHH
Confidence                    788872   3456799999999998776555555667 9999999997        4578899999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCC
Q psy323          139 TFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKI  218 (255)
Q Consensus       139 l~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (255)
                      +|+|++|+.||.+....     ......+....+..|...+.......  ...+...+    ..+          .....
T Consensus       213 l~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~----~~~----------~~~~~  271 (319)
T 4euu_A          213 FYHAATGSLPFRPFEGP-----RRNKEVMYKIITGKPSGAISGVQKAE--NGPIDWSG----DMP----------VSCSL  271 (319)
T ss_dssp             HHHHHHSSCSEECTTCG-----GGCHHHHHHHHHHCCTTCCEEEECST--TCCEEEES----SCC----------TTCSS
T ss_pred             HHHHHhCCCCCCCCCcc-----chhHHHHHHHhcCCCcccchhhhccc--CCccccCc----cCC----------ccccc
Confidence            99999999999765422     11222233333333222211111000  00011000    000          11123


Q ss_pred             ChhhHHHHHHHHHhccccCCCCCCCHHHHhcCc
Q psy323          219 PKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNE  251 (255)
Q Consensus       219 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  251 (255)
                      +...+..+.+++.+||++||++|||++|+++||
T Consensus       272 ~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          272 SRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             CHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             chhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            457788999999999999999999999999987


No 128
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.96  E-value=4.2e-32  Score=231.09  Aligned_cols=228  Identities=12%  Similarity=0.154  Sum_probs=146.4

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc--cccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN--LTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++........  ...+.+++..+..++.|++.|| |||     
T Consensus        78 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i  153 (360)
T 3eqc_A           78 IIRELQVLHECNSPYIVG---FYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI  153 (360)
T ss_dssp             HHHHHGGGGGCCCTTBCC---EEEEEEETTEE-EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHCCCCCEEE---EeEEEEECCEE-EEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCE
Confidence            346899999999999999   88887776653 55555554432222  2235799999999999999999 997     


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                             +||++ +.++.+||+|||++...... ......+ +.|+|||++.+..++.++||||+||++++|++|+.||.
T Consensus       154 ~H~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  231 (360)
T 3eqc_A          154 MHRDVKPSNILV-NSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP  231 (360)
T ss_dssp             CCSCCSGGGEEE-CTTCCEEECCCCCCHHHHHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred             EcCCccHHHEEE-CCCCCEEEEECCCCcccccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence                   68888 57889999999998765332 2233455 99999999999999999999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHH--HhcCCChhhhhhhhhhccccccccccccccccCCCCccHHH---HHHHhc---CCChhh
Q psy323          151 PFESKYYTIDEHHILKIIQ--LMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYR---ILAKSY---KIPKED  222 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~  222 (255)
                      +.+       ...+..+..  ..+..+..........    ..+...  .... .+.....+   ......   ......
T Consensus       232 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (360)
T 3eqc_A          232 PPD-------AKELELMFGCQVEGDAAETPPRPRTPG----RPLNKF--GMDS-RPPMAIFELLDYIVNEPPPKLPSGVF  297 (360)
T ss_dssp             CCC-------HHHHHHHHC-------------------------------------CCCHHHHHHHHHHSCCCCCCTTTS
T ss_pred             CCC-------HHHHHHHhcccccccCCCCCCCcccCC----Cccccc--ccCC-CCcccchhhhhHHhccCCCCCCcccc
Confidence            543       222222221  1111111100000000    000000  0000 00001111   111100   011235


Q ss_pred             HHHHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          223 AKQLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       223 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      +.++.+||.+||++||++|||++++++||||+
T Consensus       298 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  329 (360)
T 3eqc_A          298 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  329 (360)
T ss_dssp             CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             cHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence            78899999999999999999999999999986


No 129
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.96  E-value=1e-30  Score=219.54  Aligned_cols=145  Identities=17%  Similarity=0.234  Sum_probs=110.6

Q ss_pred             CCCHHHHHHHHHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCc-------------ccccccc
Q psy323           58 SFSLTTFSKYVKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDET-------------ICREDIH  112 (255)
Q Consensus        58 ~l~~~~~~~~~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~-------------~~~~~~~  112 (255)
                      ..++..++.++.|++.|| |||           +|||+ +.++.+||+|||+++......             .....++
T Consensus       160 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll-~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (332)
T 3qd2_B          160 DREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF-TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG  238 (332)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE-CTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE-eCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence            456778999999999999 998           78999 578899999999998876531             1223345


Q ss_pred             -ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcC-CChhhhhhhhhhccccc
Q psy323          113 -RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAE-IPPNLMDNERCIRNIKV  190 (255)
Q Consensus       113 -~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~-~~~~~~~~~~~~~~~~~  190 (255)
                       +.|+|||++.+..++.++||||+||++++|++|..|+.         +.  ...+...... .+..             
T Consensus       239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~---------~~--~~~~~~~~~~~~~~~-------------  294 (332)
T 3qd2_B          239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM---------ER--VRIITDVRNLKFPLL-------------  294 (332)
T ss_dssp             CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH---------HH--HHHHHHHHTTCCCHH-------------
T ss_pred             CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh---------HH--HHHHHHhhccCCCcc-------------
Confidence             99999999999999999999999999999999876653         11  1111111111 1100             


Q ss_pred             cccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          191 LLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                                                  ....++++.+|+.+||+.||++|||++++++||||++
T Consensus       295 ----------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          295 ----------------------------FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             ----------------------------HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             ----------------------------cccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence                                        0233467789999999999999999999999999985


No 130
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.96  E-value=3.2e-31  Score=224.35  Aligned_cols=194  Identities=15%  Similarity=0.227  Sum_probs=138.1

Q ss_pred             CchhHHHhhhhh--hHHHHHHHHHHHHhhhhhhhhhhcCCCCC-CCCcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFV--DAIIARIWIKAVMKKKKLLLKEILPIQPP-HQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h--~~iv~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+|+.+.|  +||++   +.+++...+.. +.++++... +.......+.+++.++..++.|++.|| |||     
T Consensus        55 ~~E~~~l~~l~~~~~~iv~---~~~~~~~~~~~-~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ii  130 (343)
T 3dbq_A           55 RNEIAYLNKLQQHSDKIIR---LYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV  130 (343)
T ss_dssp             HHHHHHHHHHTTTCTTBCC---EEEEEECSSEE-EEEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhhhhcCCceEE---EeeeEeeCCEE-EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            458999999987  89998   77777766553 455553222 122222346799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcc---cccccc-ccccchhhhhc-----------CCCCCchhHHHHHH
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETI---CREDIH-RQYKAVELIYT-----------KEFDMKIDIWSTAC  137 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~---~~~~~~-~~y~aPE~l~~-----------~~~~~~~DiwSlG~  137 (255)
                            +|||+.  ++.+||+|||+++.......   ....++ +.|+|||++.+           ..++.++||||+||
T Consensus       131 HrDikp~NIll~--~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~  208 (343)
T 3dbq_A          131 HSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC  208 (343)
T ss_dssp             CCCCCGGGEEEE--TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHH
T ss_pred             cCCCCcceEEEE--CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHH
Confidence                  789994  57899999999987754321   223456 99999999976           56889999999999


Q ss_pred             HHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcC
Q psy323          138 LTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYK  217 (255)
Q Consensus       138 il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
                      ++++|++|+.||.+..        .....+.........                                       ..
T Consensus       209 il~ell~g~~pf~~~~--------~~~~~~~~~~~~~~~---------------------------------------~~  241 (343)
T 3dbq_A          209 ILYYMTYGKTPFQQII--------NQISKLHAIIDPNHE---------------------------------------IE  241 (343)
T ss_dssp             HHHHHHHSSCTTTTCC--------SHHHHHHHHHCTTSC---------------------------------------CC
T ss_pred             HHHHHHhCCCcchhhh--------hHHHHHHHHhcCCcc---------------------------------------cC
Confidence            9999999999997432        122222222211100                                       00


Q ss_pred             CChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          218 IPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       218 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+...+.++.+|+.+||+.||.+|||+.++++||||+
T Consensus       242 ~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~  278 (343)
T 3dbq_A          242 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  278 (343)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence            2233457889999999999999999999999999985


No 131
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.96  E-value=1.2e-31  Score=229.92  Aligned_cols=138  Identities=12%  Similarity=0.124  Sum_probs=107.5

Q ss_pred             CHHHHHHHHHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccccccccccccchhhhhcC---
Q psy323           60 SLTTFSKYVKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETICREDIHRQYKAVELIYTK---  124 (255)
Q Consensus        60 ~~~~~~~~~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~y~aPE~l~~~---  124 (255)
                      ++..+..++.|++.|| |||           +|||+ +.++.+||+|||+|+....  ..+..+++.|+|||++.+.   
T Consensus       204 ~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll-~~~~~~kL~DFG~a~~~~~--~~~~~~g~~y~aPE~~~~~~~~  280 (377)
T 3byv_A          204 VHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL-DQRGGVFLTGFEHLVRDGA--RVVSSVSRGFEPPELEARRATI  280 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE-CTTCCEEECCGGGCEETTC--EEECCCCTTCCCHHHHHHHTST
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE-cCCCCEEEEechhheecCC--cccCCCCcCccChhhhcccccc
Confidence            3488889999999999 998           79999 5788999999999987554  2223333899999999988   


Q ss_pred             --------CCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccc
Q psy323          125 --------EFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQ  196 (255)
Q Consensus       125 --------~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (255)
                              .++.++||||+||++|+|++|+.||.+......      ...+                        +    
T Consensus       281 ~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~------~~~~------------------------~----  326 (377)
T 3byv_A          281 SYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG------SEWI------------------------F----  326 (377)
T ss_dssp             HHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC------SGGG------------------------G----
T ss_pred             cccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc------hhhh------------------------h----
Confidence                    899999999999999999999999975431100      0000                        0    


Q ss_pred             cccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          197 HNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                                          ......+.++.+||.+||+.||++|||+.++++||||+
T Consensus       327 --------------------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~  364 (377)
T 3byv_A          327 --------------------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE  364 (377)
T ss_dssp             --------------------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred             --------------------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence                                01123457889999999999999999999999999986


No 132
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.96  E-value=5.8e-31  Score=217.90  Aligned_cols=193  Identities=18%  Similarity=0.343  Sum_probs=146.0

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.......  ....+.+++..+..++.|++.|| |||      
T Consensus        63 ~~e~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H  138 (294)
T 2rku_A           63 SMEISIHRSLAHQHVVG---FHGFFEDNDFV-FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH  138 (294)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEECSSEE-EEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHhCCCCCEee---eeeeeccCCEE-EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            45899999999999999   88888766553 4444444432211  12235799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  151 (255)
                           +||++ +.++.+||+|||++....... ......+ +.|+|||++.+..++.++|+||+|+++++|++|+.||.+
T Consensus       139 ~dl~p~Nil~-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  217 (294)
T 2rku_A          139 RDLKLGNLFL-NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  217 (294)
T ss_dssp             CCCCGGGEEE-CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCChHhEEE-cCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                 68888 578899999999998765422 2233345 899999999988899999999999999999999999975


Q ss_pred             CCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHH
Q psy323          152 FESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLI  231 (255)
Q Consensus       152 ~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (255)
                      ..      ..+....+..   .                                         ....+...+..+.+++.
T Consensus       218 ~~------~~~~~~~~~~---~-----------------------------------------~~~~~~~~~~~~~~li~  247 (294)
T 2rku_A          218 SC------LKETYLRIKK---N-----------------------------------------EYSIPKHINPVAASLIQ  247 (294)
T ss_dssp             SS------HHHHHHHHHT---T-----------------------------------------CCCCCTTSCHHHHHHHH
T ss_pred             CC------HHHHHHHHhh---c-----------------------------------------cCCCccccCHHHHHHHH
Confidence            43      1121111110   0                                         00123345678899999


Q ss_pred             hccccCCCCCCCHHHHhcCcCCCC
Q psy323          232 PMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       232 ~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +||+.||++|||++++++||||++
T Consensus       248 ~~l~~~p~~Rps~~~ll~~~~~~~  271 (294)
T 2rku_A          248 KMLQTDPTARPTINELLNDEFFTS  271 (294)
T ss_dssp             HHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred             HHcccChhhCcCHHHHhhChheec
Confidence            999999999999999999999863


No 133
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.96  E-value=2.2e-31  Score=220.95  Aligned_cols=205  Identities=17%  Similarity=0.264  Sum_probs=136.9

Q ss_pred             CCCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc----------ccCCCCHHHHHHHHHHHHHhh
Q psy323            6 PVNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL----------TRSSFSLTTFSKYVKQISQFV   75 (255)
Q Consensus         6 ~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~----------~~~~l~~~~~~~~~~qll~~l   75 (255)
                      .+.+|+.+++.+.|+||++   +++++...+.. +.++++.........          ..+.+++..+..++.|++.||
T Consensus        59 ~~~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  134 (303)
T 2vwi_A           59 ELLKEIQAMSQCHHPNIVS---YYTSFVVKDEL-WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL  134 (303)
T ss_dssp             -------CCCCCCCTTBCC---EEEEEESSSCE-EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCCEee---EEEEEeecCCc-EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHH
Confidence            3556899999999999999   88777766553 444444433221111          235699999999999999999


Q ss_pred             -ccC-----------CCceeeCCCCcEEEeecCccccCCCCcc------cccccc-ccccchhhhhcC-CCCCchhHHHH
Q psy323           76 -YMN-----------EELLYPTQNIEIVITDLEYVRPENDETI------CREDIH-RQYKAVELIYTK-EFDMKIDIWST  135 (255)
Q Consensus        76 -ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~------~~~~~~-~~y~aPE~l~~~-~~~~~~DiwSl  135 (255)
                       |||           +||++ +.++.+||+|||++........      .....+ +.|+|||++.+. .++.++||||+
T Consensus       135 ~~lH~~~i~H~dl~p~Nil~-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl  213 (303)
T 2vwi_A          135 EYLHKNGQIHRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF  213 (303)
T ss_dssp             HHHHHTTCCCCCCSGGGEEE-CTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHH
T ss_pred             HHHHhCCCCCCCCChhhEEE-cCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHH
Confidence             998           68888 5788999999999987654211      122345 889999999874 78999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHh
Q psy323          136 ACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKS  215 (255)
Q Consensus       136 G~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (255)
                      ||++++|++|+.||.+..      ........  ..+.++. ...                 ..              ..
T Consensus       214 G~il~~l~~g~~pf~~~~------~~~~~~~~--~~~~~~~-~~~-----------------~~--------------~~  253 (303)
T 2vwi_A          214 GITAIELATGAAPYHKYP------PMKVLMLT--LQNDPPS-LET-----------------GV--------------QD  253 (303)
T ss_dssp             HHHHHHHHHSSCTTTTSC------GGGHHHHH--HTSSCCC-TTC-----------------------------------
T ss_pred             HHHHHHHHhCCCCCccCc------hhhHHHHH--hccCCCc-ccc-----------------cc--------------cc
Confidence            999999999999998543      22221111  1111110 000                 00              00


Q ss_pred             cCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          216 YKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       216 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .......+.++.+++.+||+.||.+|||++++++||||++
T Consensus       254 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  293 (303)
T 2vwi_A          254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK  293 (303)
T ss_dssp             -CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC--
T ss_pred             chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhc
Confidence            0112345678899999999999999999999999999974


No 134
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96  E-value=3.6e-30  Score=218.96  Aligned_cols=199  Identities=19%  Similarity=0.268  Sum_probs=146.0

Q ss_pred             CCCchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            6 PVNPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         6 ~~~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+.+|+.+++.+ .|+||+.   +..++...+.. +.++++.......  ....+.+++..++.++.|++.|| |||   
T Consensus       104 ~~~~E~~~l~~l~~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  179 (355)
T 1vzo_A          104 HTRTERQVLEHIRQSPFLVT---LHYAFQTETKL-HLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG  179 (355)
T ss_dssp             GCCCHHHHHHHHHTCTTBCC---EEEEEEETTEE-EEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHccCCCceeE---EEEEEeeCceE-EEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456799999999 5999999   77777666553 4555555442222  22235799999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCc--ccccccc-ccccchhhhhcC--CCCCchhHHHHHHHHHHHhhC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDET--ICREDIH-RQYKAVELIYTK--EFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~--~~~~~~~-~~y~aPE~l~~~--~~~~~~DiwSlG~il~~l~~g  145 (255)
                              +|||+ +.++.+||+|||+++......  .....++ +.|+|||++.+.  .++.++||||+||++|+|++|
T Consensus       180 ivH~Dlkp~NIll-~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g  258 (355)
T 1vzo_A          180 IIYRDIKLENILL-DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG  258 (355)
T ss_dssp             CCCCCCCGGGEEE-CTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHS
T ss_pred             cccCCCCHHHEEE-CCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHC
Confidence                    78999 588999999999998765421  2223456 999999999864  578999999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      +.||.+.....   ....+..  .....                                         ....+...+..
T Consensus       259 ~~pf~~~~~~~---~~~~~~~--~~~~~-----------------------------------------~~~~~~~~~~~  292 (355)
T 1vzo_A          259 ASPFTVDGEKN---SQAEISR--RILKS-----------------------------------------EPPYPQEMSAL  292 (355)
T ss_dssp             SCTTSCTTSCC---CHHHHHH--HHHHC-----------------------------------------CCCCCTTSCHH
T ss_pred             CCCCccCCccc---hHHHHHH--HHhcc-----------------------------------------CCCCCcccCHH
Confidence            99997543211   1111111  11100                                         00123455678


Q ss_pred             HHHHHHhccccCCCCCC-----CHHHHhcCcCCCC
Q psy323          226 LVRFLIPMLRLNPNKRE-----TAEQCLQNEWLIK  255 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~-----t~~e~l~hp~~~~  255 (255)
                      +.+||.+||+.||++||     |++++++||||++
T Consensus       293 ~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          293 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             HHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence            89999999999999999     9999999999974


No 135
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.96  E-value=7.9e-31  Score=218.98  Aligned_cols=196  Identities=15%  Similarity=0.225  Sum_probs=145.4

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.........   ....+++..+..++.|++.|| |||     
T Consensus        72 ~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~  147 (314)
T 3com_A           72 IKEISIMQQCDSPHVVK---YYGSYFKNTDL-WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKI  147 (314)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEEETTEE-EEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhCCCCCCcc---EEEEEEeCCEE-EEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            35899999999999999   88777765543 444454443222211   245799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                            +||++ +.++.+||+|||++....... ......+ +.|+|||++.+..++.++||||+||++++|++|..||.
T Consensus       148 H~dl~p~Nil~-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  226 (314)
T 3com_A          148 HRDIKAGNILL-NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYA  226 (314)
T ss_dssp             CCCCSGGGEEE-CTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTT
T ss_pred             CCCcCHHHEEE-CCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence                  68888 578899999999998765432 2223345 89999999998889999999999999999999999997


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +..      ....   +......++...                                      ..+...+..+.+|+
T Consensus       227 ~~~------~~~~---~~~~~~~~~~~~--------------------------------------~~~~~~~~~l~~li  259 (314)
T 3com_A          227 DIH------PMRA---IFMIPTNPPPTF--------------------------------------RKPELWSDNFTDFV  259 (314)
T ss_dssp             TSC------HHHH---HHHHHHSCCCCC--------------------------------------SSGGGSCHHHHHHH
T ss_pred             CCC------hHHH---HHHHhcCCCccc--------------------------------------CCcccCCHHHHHHH
Confidence            443      1111   111111110000                                      01133467889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+||..||.+|||+.++++||||++
T Consensus       260 ~~~l~~dp~~Rpt~~~ll~~~~~~~  284 (314)
T 3com_A          260 KQCLVKSPEQRATATQLLQHPFVRS  284 (314)
T ss_dssp             HHHTCSCTTTSCCHHHHTTSHHHHT
T ss_pred             HHHccCChhhCcCHHHHHhCHHHhc
Confidence            9999999999999999999999863


No 136
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.96  E-value=7.3e-31  Score=225.98  Aligned_cols=194  Identities=15%  Similarity=0.234  Sum_probs=137.3

Q ss_pred             CchhHHHhhhhh--hHHHHHHHHHHHHhhhhhhhhhhcCCCCC-CCCcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFV--DAIIARIWIKAVMKKKKLLLKEILPIQPP-HQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h--~~iv~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+|+.+.|  +||++   +++++...+.+ +.++++... +.........+++..++.++.|++.|| |||     
T Consensus       102 ~~Ei~~l~~l~~~~~~iv~---~~~~~~~~~~~-~lv~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iv  177 (390)
T 2zmd_A          102 RNEIAYLNKLQQHSDKIIR---LYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV  177 (390)
T ss_dssp             HHHHHHHHHHTTTCTTBCC---EEEEEECSSEE-EEEEECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHcccCCCeEEE---EEEEEecCCEE-EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            458899999964  99998   77766665553 444543221 212222335789999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCc---ccccccc-ccccchhhhhc-----------CCCCCchhHHHHHH
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDET---ICREDIH-RQYKAVELIYT-----------KEFDMKIDIWSTAC  137 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~---~~~~~~~-~~y~aPE~l~~-----------~~~~~~~DiwSlG~  137 (255)
                            +|||+  .++.+||+|||+++......   .....++ +.|+|||++.+           ..++.++||||+||
T Consensus       178 HrDlkp~NIll--~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGv  255 (390)
T 2zmd_A          178 HSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC  255 (390)
T ss_dssp             CCCCCGGGEEE--SSSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHH
T ss_pred             ecCCCHHHEEE--ECCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHH
Confidence                  68998  35789999999998775432   1234456 99999999976           36889999999999


Q ss_pred             HHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcC
Q psy323          138 LTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYK  217 (255)
Q Consensus       138 il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
                      ++|+|++|+.||.+..        .....+.........                                       ..
T Consensus       256 il~ell~G~~Pf~~~~--------~~~~~~~~~~~~~~~---------------------------------------~~  288 (390)
T 2zmd_A          256 ILYYMTYGKTPFQQII--------NQISKLHAIIDPNHE---------------------------------------IE  288 (390)
T ss_dssp             HHHHHHHSSCTTTTCC--------CHHHHHHHHHCTTSC---------------------------------------CC
T ss_pred             HHHHHHHCCCcchhhh--------HHHHHHHHHhCcccc---------------------------------------CC
Confidence            9999999999997532        112222222211000                                       00


Q ss_pred             CChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          218 IPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       218 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+...+.++.+||.+||+.||++|||+.++++||||+
T Consensus       289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  325 (390)
T 2zmd_A          289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  325 (390)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             CCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence            1123357889999999999999999999999999985


No 137
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.96  E-value=4e-31  Score=218.18  Aligned_cols=193  Identities=14%  Similarity=0.167  Sum_probs=129.7

Q ss_pred             hhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc-----ccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323           10 DVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK-----NLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus        10 e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +...++.+.|+||++   +.+++...+.. +.++++.......     ......+++..++.++.|++.|| |||     
T Consensus        56 ~~~~~~~~~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i  131 (290)
T 3fme_A           56 LDISMRTVDCPFTVT---FYGALFREGDV-WICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV  131 (290)
T ss_dssp             HHHHHTTCCCTTBCC---EEEEEECSSSE-EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHhCCCCeEEE---EeeeeeccCCE-EEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence            444577889999999   88877766553 3444443321111     11235799999999999999999 998     


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhh----hcCCCCCchhHHHHHHHHHHHhhCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELI----YTKEFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l----~~~~~~~~~DiwSlG~il~~l~~g~  146 (255)
                             +||++ +.++.+||+|||+++............+ +.|+|||++    .+..++.++||||+||++++|++|+
T Consensus       132 ~H~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~  210 (290)
T 3fme_A          132 IHRDVKPSNVLI-NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR  210 (290)
T ss_dssp             CCCCCSGGGCEE-CTTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTS
T ss_pred             ecCCCCHHHEEE-CCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCC
Confidence                   57888 5788999999999987766433344456 999999997    3447889999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+...     ....+.........                           ..               .+...+.++
T Consensus       211 ~p~~~~~~-----~~~~~~~~~~~~~~---------------------------~~---------------~~~~~~~~~  243 (290)
T 3fme_A          211 FPYDSWGT-----PFQQLKQVVEEPSP---------------------------QL---------------PADKFSAEF  243 (290)
T ss_dssp             CSSCCCSC-----HHHHHHHHHHSCCC---------------------------CC---------------CTTTSCHHH
T ss_pred             CCccccCc-----hHHHHHHHhccCCC---------------------------Cc---------------ccccCCHHH
Confidence            99975431     22222222111000                           00               112356789


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+++.+||+.||++|||++++++||||+
T Consensus       244 ~~li~~~l~~~p~~Rpt~~e~l~hp~f~  271 (290)
T 3fme_A          244 VDFTSQCLKKNSKERPTYPELMQHPFFT  271 (290)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             HHHHHHHhhcChhhCcCHHHHHhCcccc
Confidence            9999999999999999999999999986


No 138
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.96  E-value=6.1e-31  Score=217.12  Aligned_cols=196  Identities=19%  Similarity=0.308  Sum_probs=145.0

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+++++.+.|+||++   +.+++...+.. +.++++.....  ........+++..++.++.|++.|| |||      
T Consensus        69 ~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H  144 (287)
T 2wei_A           69 LREVELLKKLDHPNIMK---LFEILEDSSSF-YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH  144 (287)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEECSSEE-EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHhccCCCccE---EEEEEeCCCeE-EEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            35899999999999999   88877766553 45555544322  2222345799999999999999999 998      


Q ss_pred             -----CCceeeCC--CCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -----EELLYPTQ--NIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -----~niLl~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                           +||++...  ++.+||+|||++.............+ +.|+|||++.+. ++.++||||+|+++++|++|..||.
T Consensus       145 ~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~  223 (287)
T 2wei_A          145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY  223 (287)
T ss_dssp             SCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCC
Confidence                 68888532  34799999999987766444444455 899999998765 8899999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +.+      ..+.+..+.......+.                           +             .....+.++.+++
T Consensus       224 ~~~------~~~~~~~~~~~~~~~~~---------------------------~-------------~~~~~~~~~~~li  257 (287)
T 2wei_A          224 GKN------EYDILKRVETGKYAFDL---------------------------P-------------QWRTISDDAKDLI  257 (287)
T ss_dssp             CSS------HHHHHHHHHHCCCCCCS---------------------------G-------------GGTTSCHHHHHHH
T ss_pred             CCC------HHHHHHHHHcCCCCCCc---------------------------h-------------hhhhcCHHHHHHH
Confidence            643      22222222211000000                           0             0023467889999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+||+.||++|||++++++||||+
T Consensus       258 ~~~l~~dp~~Rps~~ell~hp~~~  281 (287)
T 2wei_A          258 RKMLTFHPSLRITATQCLEHPWIQ  281 (287)
T ss_dssp             HHHTCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHHcccChhhCcCHHHHhcCHHHh
Confidence            999999999999999999999986


No 139
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.96  E-value=2.7e-30  Score=218.76  Aligned_cols=214  Identities=16%  Similarity=0.219  Sum_probs=147.7

Q ss_pred             CCCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc-------c---ccCCCCHHHHHHHHHHHHHhh
Q psy323            6 PVNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN-------L---TRSSFSLTTFSKYVKQISQFV   75 (255)
Q Consensus         6 ~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-------~---~~~~l~~~~~~~~~~qll~~l   75 (255)
                      .+.+|+.+++.+.|+||++   +.+++...+.. +.++++........       .   ....+++..++.++.|++.||
T Consensus        89 ~~~~E~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l  164 (348)
T 2pml_X           89 DFKNELQIITDIKNEYCLT---CEGIITNYDEV-YIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSF  164 (348)
T ss_dssp             HHHHHHHHHTTCCCTTBCC---CSEEEESSSEE-EEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCcce---EEEEEeeCCeE-EEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHH
Confidence            3456999999999999999   88888776653 44444443322111       1   146799999999999999999


Q ss_pred             -ccC------------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcC-CCCC-chhHHHHHHHH
Q psy323           76 -YMN------------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTK-EFDM-KIDIWSTACLT  139 (255)
Q Consensus        76 -ylH------------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~-~~~~-~~DiwSlG~il  139 (255)
                       |||            +||++ +.++.+||+|||.+...... ......+ +.|+|||++.+. .++. ++||||+||++
T Consensus       165 ~~lH~~~~i~H~dl~p~Nil~-~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il  242 (348)
T 2pml_X          165 SYIHNEKNICHRDVKPSNILM-DKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL  242 (348)
T ss_dssp             HHHHHTSCEECCCCCGGGEEE-CTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHH
T ss_pred             HHHhccCCEeecCCChHhEEE-cCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHH
Confidence             998            47888 58889999999999876543 3334455 999999999987 6665 99999999999


Q ss_pred             HHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCC
Q psy323          140 FELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIP  219 (255)
Q Consensus       140 ~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
                      ++|++|..||.+...     ..+....+.......+...                 ......... ..       .....
T Consensus       243 ~~l~~g~~pf~~~~~-----~~~~~~~i~~~~~~~~~~~-----------------~~~~~~~~~-~~-------~~~~~  292 (348)
T 2pml_X          243 YVMFYNVVPFSLKIS-----LVELFNNIRTKNIEYPLDR-----------------NHFLYPLTN-KK-------STCSN  292 (348)
T ss_dssp             HHHHHSSCSSCCSSC-----SHHHHHHHTSCCCCCCCSS-----------------SSSTTTTCC---------------
T ss_pred             HHHHhCCCCCCCCCc-----HHHHHHHHhccCcCCccch-----------------hhhhccccc-cc-------cccch
Confidence            999999999986541     1222222211100000000                 000000000 00       00011


Q ss_pred             hhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          220 KEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       220 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ...+.++.+|+.+||+.||.+|||++++++||||++
T Consensus       293 ~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~  328 (348)
T 2pml_X          293 NFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD  328 (348)
T ss_dssp             -CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTT
T ss_pred             hhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccC
Confidence            345688999999999999999999999999999974


No 140
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.96  E-value=1.9e-30  Score=214.66  Aligned_cols=197  Identities=19%  Similarity=0.276  Sum_probs=142.3

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc-----ccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL-----TRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.........     ....+++..++.++.|++.|| |||   
T Consensus        67 ~~e~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  142 (295)
T 2clq_A           67 HEEIALHKHLKHKNIVQ---YLGSFSENGFI-KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ  142 (295)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEEETTEE-EEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCCCEee---EeeEEEeCCcE-EEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence            35899999999999999   88888766553 344444432211111     123577999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCcc-cccccc-ccccchhhhhcC--CCCCchhHHHHHHHHHHHhhCC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETI-CREDIH-RQYKAVELIYTK--EFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~-~~~~~~-~~y~aPE~l~~~--~~~~~~DiwSlG~il~~l~~g~  146 (255)
                              +||++...++.+||+|||++........ .....+ +.|+|||++.+.  .++.++||||+||++++|++|+
T Consensus       143 i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~  222 (295)
T 2clq_A          143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK  222 (295)
T ss_dssp             EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTS
T ss_pred             EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence                    7899964488999999999987654222 223345 899999999875  3789999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+..      ...............                                         ...+...+.++
T Consensus       223 ~pf~~~~------~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~  255 (295)
T 2clq_A          223 PPFYELG------EPQAAMFKVGMFKVH-----------------------------------------PEIPESMSAEA  255 (295)
T ss_dssp             CTTGGGS------SHHHHHHHHHHHCCC-----------------------------------------CCCCTTSCHHH
T ss_pred             CCccCCC------chhHHHHhhcccccc-----------------------------------------ccccccCCHHH
Confidence            9997432      111110000000100                                         01234566889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+++.+||+.||++|||++++++||||+.
T Consensus       256 ~~li~~~l~~dp~~Rps~~~ll~~~~~~~  284 (295)
T 2clq_A          256 KAFILKCFEPDPDKRACANDLLVDEFLKV  284 (295)
T ss_dssp             HHHHHHTTCSSTTTSCCHHHHHTSGGGCC
T ss_pred             HHHHHHHccCChhhCCCHHHHhcChhhhh
Confidence            99999999999999999999999999973


No 141
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.96  E-value=1.2e-30  Score=223.19  Aligned_cols=146  Identities=8%  Similarity=0.071  Sum_probs=107.4

Q ss_pred             HHHHHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhc--CCCCCc
Q psy323           65 SKYVKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT--KEFDMK  129 (255)
Q Consensus        65 ~~~~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~--~~~~~~  129 (255)
                      ..++.|++.|| |||           +|||+ +.++.+||+|||+|+.....  .....+ +.|+|||++.+  ..++.+
T Consensus       197 ~~i~~qi~~aL~~LH~~~ivHrDikp~NIll-~~~~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~  273 (371)
T 3q60_A          197 HILTAQLIRLAANLQSKGLVHGHFTPDNLFI-MPDGRLMLGDVSALWKVGTR--GPASSVPVTYAPREFLNASTATFTHA  273 (371)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEETTCSGGGEEE-CTTSCEEECCGGGEEETTCE--EEGGGSCGGGCCHHHHTCSEEECCHH
T ss_pred             HHHHHHHHHHHHHHHHCCCccCcCCHHHEEE-CCCCCEEEEecceeeecCCC--ccCccCCcCCcChhhccCCCCCcCcc
Confidence            67779999999 998           79999 58899999999999977652  223344 99999999987  578999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHH
Q psy323          130 IDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFY  209 (255)
Q Consensus       130 ~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (255)
                      +||||+||++|+|++|+.||.+.......           .....                ..... .......+     
T Consensus       274 ~DiwSlG~il~elltg~~Pf~~~~~~~~~-----------~~~~~----------------~~~~~-~~~~~~~~-----  320 (371)
T 3q60_A          274 LNAWQLGLSIYRVWCLFLPFGLVTPGIKG-----------SWKRP----------------SLRVP-GTDSLAFG-----  320 (371)
T ss_dssp             HHHHHHHHHHHHHHHSSCSTTBCCTTCTT-----------CCCBC----------------CTTSC-CCCSCCCT-----
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCcCccccc-----------chhhh----------------hhhhc-cccccchh-----
Confidence            99999999999999999999855311000           00000                00000 00000000     


Q ss_pred             HHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          210 RILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                              .....+.++.+||.+||+.||++|||+.++++||||+
T Consensus       321 --------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  357 (371)
T 3q60_A          321 --------SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL  357 (371)
T ss_dssp             --------TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHH
T ss_pred             --------hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHH
Confidence                    1124578899999999999999999999999999996


No 142
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.96  E-value=2.6e-30  Score=214.91  Aligned_cols=193  Identities=18%  Similarity=0.252  Sum_probs=145.1

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC-CcccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ-HKNLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++..... ......+.+++..+..++.|++.|| |||       
T Consensus        68 ~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~  143 (303)
T 3a7i_A           68 QQEITVLSQCDSPYVTK---YYGSYLKDTKL-WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR  143 (303)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEEETTEE-EEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHHHHhCCCCCEeE---EEEEEecCCeE-EEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence            45889999999999999   88777665553 44445444321 2223346799999999999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCCC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPF  152 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~  152 (255)
                          +||++ +.++.+||+|||++....... ......+ +.|+|||++.+..++.++||||+||++++|++|..||.+.
T Consensus       144 dl~p~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  222 (303)
T 3a7i_A          144 DIKAANVLL-SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL  222 (303)
T ss_dssp             CCSGGGEEE-CTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CCChheEEE-CCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc
Confidence                68888 578899999999998765532 2223345 8999999999888999999999999999999999999744


Q ss_pred             CCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHh
Q psy323          153 ESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIP  232 (255)
Q Consensus       153 ~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  232 (255)
                      .      .......+..  +.++                                         ..+...+..+.+++.+
T Consensus       223 ~------~~~~~~~~~~--~~~~-----------------------------------------~~~~~~~~~l~~li~~  253 (303)
T 3a7i_A          223 H------PMKVLFLIPK--NNPP-----------------------------------------TLEGNYSKPLKEFVEA  253 (303)
T ss_dssp             C------HHHHHHHHHH--SCCC-----------------------------------------CCCSSCCHHHHHHHHH
T ss_pred             C------HHHHHHHhhc--CCCC-----------------------------------------CCccccCHHHHHHHHH
Confidence            3      1111111111  0000                                         0123456788999999


Q ss_pred             ccccCCCCCCCHHHHhcCcCCC
Q psy323          233 MLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       233 ~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      ||+.||++|||++++++||||.
T Consensus       254 ~l~~dp~~Rps~~~ll~~~~~~  275 (303)
T 3a7i_A          254 CLNKEPSFRPTAKELLKHKFIL  275 (303)
T ss_dssp             HCCSSGGGSCCHHHHTTCHHHH
T ss_pred             HcCCChhhCcCHHHHhhChhhh
Confidence            9999999999999999999984


No 143
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.96  E-value=6.6e-31  Score=218.18  Aligned_cols=195  Identities=17%  Similarity=0.242  Sum_probs=140.0

Q ss_pred             chhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            9 PDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      +|+.+++.+.|+||++   +.+++...+.. +.++++.........   ....+++..+..++.|++.|| |||      
T Consensus        65 ~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H  140 (302)
T 2j7t_A           65 VEIEILATCDHPYIVK---LLGAYYHDGKL-WIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH  140 (302)
T ss_dssp             HHHHHHHHCCCTTBCC---EEEEEECC-CE-EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHhcCCCCCEee---eeeeeeeCCeE-EEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCccc
Confidence            4899999999999999   88877766553 444454443222111   235699999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhh-----cCCCCCchhHHHHHHHHHHHhhCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIY-----TKEFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~-----~~~~~~~~DiwSlG~il~~l~~g~  146 (255)
                           +||++ +.++.+||+|||++...... .......+ +.|+|||++.     +..++.++||||+||++++|++|.
T Consensus       141 ~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~  219 (302)
T 2j7t_A          141 RDLKAGNVLM-TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE  219 (302)
T ss_dssp             CCCSGGGEEE-CTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSS
T ss_pred             CCCCHHHEEE-CCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCC
Confidence                 68888 57889999999987643221 11223345 8999999995     457889999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+.+      ....+..+..  +.++. .                                      ..+...+.++
T Consensus       220 ~p~~~~~------~~~~~~~~~~--~~~~~-~--------------------------------------~~~~~~~~~l  252 (302)
T 2j7t_A          220 PPHHELN------PMRVLLKIAK--SDPPT-L--------------------------------------LTPSKWSVEF  252 (302)
T ss_dssp             CTTTTSC------HHHHHHHHHH--SCCCC-C--------------------------------------SSGGGSCHHH
T ss_pred             CCCccCC------HHHHHHHHhc--cCCcc-c--------------------------------------CCccccCHHH
Confidence            9997543      2222222211  11100 0                                      0123456788


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+++.+||+.||++|||++++++||||++
T Consensus       253 ~~li~~~l~~dp~~Rps~~~ll~h~~~~~  281 (302)
T 2j7t_A          253 RDFLKIALDKNPETRPSAAQLLEHPFVSS  281 (302)
T ss_dssp             HHHHHHHSCSCTTTSCCHHHHTTSTTTTT
T ss_pred             HHHHHHHcccChhhCCCHHHHhcChHHhh
Confidence            99999999999999999999999999974


No 144
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.96  E-value=1.2e-30  Score=217.01  Aligned_cols=194  Identities=21%  Similarity=0.317  Sum_probs=140.7

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHh--hhhhhhhhhcCCCCCCC---CcccccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMK--KKKLLLKEILPIQPPHQ---HKNLTRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~--~~~~~~~~~~~~~~~l~---~~~~~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      +.+|+++++.+.|+||++   +.+++.  ..+. ++.++++.....   ........+++..+..++.|++.|| |||  
T Consensus        53 ~~~E~~~l~~l~h~~i~~---~~~~~~~~~~~~-~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~  128 (305)
T 2wtk_C           53 VKKEIQLLRRLRHKNVIQ---LVDVLYNEEKQK-MYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ  128 (305)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEECC---C-EEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCCCeeE---EEEEEEcCCCCe-EEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            346899999999999999   888763  2222 233444433221   1112245699999999999999999 998  


Q ss_pred             ---------CCceeeCCCCcEEEeecCccccCCCC---cccccccc-ccccchhhhhcCC--CCCchhHHHHHHHHHHHh
Q psy323           79 ---------EELLYPTQNIEIVITDLEYVRPENDE---TICREDIH-RQYKAVELIYTKE--FDMKIDIWSTACLTFELV  143 (255)
Q Consensus        79 ---------~niLl~~~~~~~kl~DfG~a~~~~~~---~~~~~~~~-~~y~aPE~l~~~~--~~~~~DiwSlG~il~~l~  143 (255)
                               +||++ +.++.+||+|||++......   .......+ +.|+|||++.+..  ++.++||||+||++++|+
T Consensus       129 ~i~H~dlkp~NIl~-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~  207 (305)
T 2wtk_C          129 GIVHKDIKPGNLLL-TTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNIT  207 (305)
T ss_dssp             TEECSCCSGGGEEE-CTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHH
T ss_pred             CeeecCCCcccEEE-cCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHH
Confidence                     68888 57889999999999876531   12223345 8999999998753  367999999999999999


Q ss_pred             hCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhH
Q psy323          144 TGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDA  223 (255)
Q Consensus       144 ~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (255)
                      +|..||.+.+      .......+...                                            ....+...+
T Consensus       208 ~g~~p~~~~~------~~~~~~~i~~~--------------------------------------------~~~~~~~~~  237 (305)
T 2wtk_C          208 TGLYPFEGDN------IYKLFENIGKG--------------------------------------------SYAIPGDCG  237 (305)
T ss_dssp             HSSCSCCCSS------HHHHHHHHHHC--------------------------------------------CCCCCSSSC
T ss_pred             hCCCCCCCch------HHHHHHHHhcC--------------------------------------------CCCCCCccC
Confidence            9999998543      11222211110                                            001223456


Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          224 KQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       224 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ..+.+|+.+||+.||++|||++++++||||++
T Consensus       238 ~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  269 (305)
T 2wtk_C          238 PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK  269 (305)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHS
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcCccccc
Confidence            78899999999999999999999999999863


No 145
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.96  E-value=8.4e-31  Score=219.79  Aligned_cols=188  Identities=18%  Similarity=0.252  Sum_probs=142.2

Q ss_pred             CCchhHHHhhhhh--hHHHHHHHHHHHHhhhhhhhhhhcCCCCC---CCCcccccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            7 VNPDVKVMENMFV--DAIIARIWIKAVMKKKKLLLKEILPIQPP---HQHKNLTRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h--~~iv~~~~l~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      +.+|+.+++.+.|  +|+++   +.+++...+.. +.++++...   +.......+.+++..++.++.|++.|| |||  
T Consensus        93 ~~~E~~~l~~l~~~~~~i~~---~~~~~~~~~~~-~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~  168 (320)
T 3a99_A           93 VPMEVVLLKKVSSGFSGVIR---LLDWFERPDSF-VLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC  168 (320)
T ss_dssp             EEHHHHHHHHHCSSSCSBCC---EEEEEECSSEE-EEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhccCCCCceE---EEEEEecCCcE-EEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4459999999964  99999   88888776553 333333221   222222346799999999999999999 998  


Q ss_pred             ---------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCC-CCchhHHHHHHHHHHHhhCCC
Q psy323           79 ---------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEF-DMKIDIWSTACLTFELVTGDY  147 (255)
Q Consensus        79 ---------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~-~~~~DiwSlG~il~~l~~g~~  147 (255)
                               +|||+...++.+||+|||+++..... ......+ +.|+|||++.+..+ +.++||||+||++++|++|+.
T Consensus       169 ~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~  247 (320)
T 3a99_A          169 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI  247 (320)
T ss_dssp             TEECCCCSGGGEEEETTTTEEEECCCTTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             CcEeCCCCHHHEEEeCCCCCEEEeeCccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCC
Confidence                     79999546789999999999877653 2334456 99999999988865 688999999999999999999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+.         ..   +..  +..                                          ..+...+.++.
T Consensus       248 pf~~~---------~~---~~~--~~~------------------------------------------~~~~~~~~~~~  271 (320)
T 3a99_A          248 PFEHD---------EE---IIR--GQV------------------------------------------FFRQRVSSECQ  271 (320)
T ss_dssp             SCCSH---------HH---HHH--CCC------------------------------------------CCSSCCCHHHH
T ss_pred             CCCCh---------hh---hhc--ccc------------------------------------------cccccCCHHHH
Confidence            99631         11   100  000                                          01234567889


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +|+.+||+.||++|||++++++||||++
T Consensus       272 ~li~~~l~~dp~~Rps~~~ll~hp~~~~  299 (320)
T 3a99_A          272 HLIRWCLALRPSDRPTFEEIQNHPWMQD  299 (320)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             HHHHHHccCChhhCcCHHHHhcCHhhcC
Confidence            9999999999999999999999999974


No 146
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.96  E-value=3.5e-30  Score=211.92  Aligned_cols=188  Identities=13%  Similarity=0.150  Sum_probs=137.0

Q ss_pred             chhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc------cCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            9 PDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT------RSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         9 ~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      +|+..+..+ .|+||++   +.+++...+.. +.++++..........      .+.+++..++.++.|++.|| |||  
T Consensus        59 ~e~~~~~~l~~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~  134 (289)
T 1x8b_A           59 REVYAHAVLGQHSHVVR---YFSAWAEDDHM-LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM  134 (289)
T ss_dssp             HHHHHHHHSCSCTTBCC---EEEEEEETTEE-EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCeee---eeeeeecCCeE-EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            366777777 8999999   88887766653 4455554442222211      25699999999999999999 998  


Q ss_pred             ---------CCceeeC------------------CCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcC-CCCCc
Q psy323           79 ---------EELLYPT------------------QNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTK-EFDMK  129 (255)
Q Consensus        79 ---------~niLl~~------------------~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~-~~~~~  129 (255)
                               +||++..                  ....+||+|||.+.......   ...+ +.|+|||++.+. .++++
T Consensus       135 ~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~  211 (289)
T 1x8b_A          135 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPK  211 (289)
T ss_dssp             TEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHH
T ss_pred             CEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCch
Confidence                     7888842                  33479999999998776522   2345 999999999877 56689


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHH
Q psy323          130 IDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFY  209 (255)
Q Consensus       130 ~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (255)
                      +||||+||++++|++|.+++...         .....+..  +..                         .         
T Consensus       212 ~Di~slG~il~~l~~~~~~~~~~---------~~~~~~~~--~~~-------------------------~---------  246 (289)
T 1x8b_A          212 ADIFALALTVVCAAGAEPLPRNG---------DQWHEIRQ--GRL-------------------------P---------  246 (289)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCSSS---------HHHHHHHT--TCC-------------------------C---------
T ss_pred             hhHHHHHHHHHHHhcCCCCCcch---------hHHHHHHc--CCC-------------------------C---------
Confidence            99999999999999998877521         22222111  000                         0         


Q ss_pred             HHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          210 RILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                             ..+...+.++.+++.+||+.||++|||+.++++||||++
T Consensus       247 -------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  285 (289)
T 1x8b_A          247 -------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS  285 (289)
T ss_dssp             -------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred             -------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhh
Confidence                   022345688999999999999999999999999999974


No 147
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.96  E-value=1.8e-30  Score=219.33  Aligned_cols=190  Identities=15%  Similarity=0.204  Sum_probs=139.3

Q ss_pred             HHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc-----cccCCCCHHHHHHHHHHHHHhh-ccC--------
Q psy323           13 VMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN-----LTRSSFSLTTFSKYVKQISQFV-YMN--------   78 (255)
Q Consensus        13 ~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~l~~~~~~~~~~qll~~l-ylH--------   78 (255)
                      .++.+.|+||++   +.+++...+.. +.++++........     .....+++..++.++.|++.|| |||        
T Consensus       103 ~~~~~~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~  178 (340)
T 3an0_A          103 SMRTVDCPFTVT---FYGALFREGDV-WICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR  178 (340)
T ss_dssp             HHTTCCCTTTCC---EEEEEECSSCE-EEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             HHhhcCCCcEEE---EeeEEEeCCcE-EEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence            377789999999   88887766553 44555543311111     1246799999999999999999 998        


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhc----CCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT----KEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~----~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                          +|||+ +.++.+||+|||+++............+ +.|+|||++.+    ..++.++||||+||++|+|++|+.||
T Consensus       179 Dlkp~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~  257 (340)
T 3an0_A          179 DVKPSNVLI-NALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY  257 (340)
T ss_dssp             SCCSTTEEE-CSTTCEEECCCSHHHHHSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSS
T ss_pred             CCCHHHEEE-CCCCCEEEeeCCCceecccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence                68888 5788999999999987765333333456 99999999754    36889999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+...     ....+..+..   ....                        ..               .+...+.++.+|
T Consensus       258 ~~~~~-----~~~~~~~~~~---~~~~------------------------~~---------------~~~~~~~~~~~l  290 (340)
T 3an0_A          258 DSWGT-----PFQQLKQVVE---EPSP------------------------QL---------------PADKFSAEFVDF  290 (340)
T ss_dssp             CCCSC-----HHHHHHHHHH---SCCC------------------------CC---------------CGGGSCHHHHHH
T ss_pred             ccccc-----hHHHHHHHhc---CCCC------------------------CC---------------CcccCCHHHHHH
Confidence            75431     1222222211   1000                        00               012346789999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      +.+||+.||++|||+.++++||||+
T Consensus       291 i~~~l~~dp~~Rps~~ell~hp~f~  315 (340)
T 3an0_A          291 TSQCLKKNSKERPTYPELMQHPFFT  315 (340)
T ss_dssp             HHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             HHHHccCCcccCcCHHHHhcCcCcc
Confidence            9999999999999999999999985


No 148
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.96  E-value=5.3e-30  Score=213.85  Aligned_cols=189  Identities=15%  Similarity=0.220  Sum_probs=140.1

Q ss_pred             CCCchhHHHhhh----hhhHHHHHHHHHHHHhhhhhhhhhhcCC-CCC--CCCcccccCCCCHHHHHHHHHHHHHhh-cc
Q psy323            6 PVNPDVKVMENM----FVDAIIARIWIKAVMKKKKLLLKEILPI-QPP--HQHKNLTRSSFSLTTFSKYVKQISQFV-YM   77 (255)
Q Consensus         6 ~~~~e~~~l~~~----~h~~iv~~~~l~~~~~~~~~~~~~~~~~-~~~--l~~~~~~~~~l~~~~~~~~~~qll~~l-yl   77 (255)
                      .+.+|+.+++.+    .|+||++   +.+++...+.. +.++++ ...  +.......+.+++..++.++.|++.|| ||
T Consensus        80 ~~~~e~~~l~~l~~~~~h~~i~~---~~~~~~~~~~~-~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l  155 (312)
T 2iwi_A           80 TCPLEVALLWKVGAGGGHPGVIR---LLDWFETQEGF-MLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHC  155 (312)
T ss_dssp             CCCHHHHHHHHHHSSCCCSSBCC---EEEEC-----C-EEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcccCCCCCeee---EEEEEecCCeE-EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            455699999999    8999999   88877766553 333333 121  212222245699999999999999999 99


Q ss_pred             C-----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCC-CchhHHHHHHHHHHHhh
Q psy323           78 N-----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFD-MKIDIWSTACLTFELVT  144 (255)
Q Consensus        78 H-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~-~~~DiwSlG~il~~l~~  144 (255)
                      |           +||++...++.+||+|||+++..... ......+ +.|+|||++.+..+. .++||||+||++++|++
T Consensus       156 H~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  234 (312)
T 2iwi_A          156 HSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVC  234 (312)
T ss_dssp             HHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHH
Confidence            8           78999547889999999999877653 2334455 899999999888664 58999999999999999


Q ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHH
Q psy323          145 GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAK  224 (255)
Q Consensus       145 g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      |+.||.+.         ..   +...                                            ....+...+.
T Consensus       235 g~~pf~~~---------~~---~~~~--------------------------------------------~~~~~~~~~~  258 (312)
T 2iwi_A          235 GDIPFERD---------QE---ILEA--------------------------------------------ELHFPAHVSP  258 (312)
T ss_dssp             SSCSCCSH---------HH---HHHT--------------------------------------------CCCCCTTSCH
T ss_pred             CCCCCCCh---------HH---Hhhh--------------------------------------------ccCCcccCCH
Confidence            99999631         11   1110                                            0012234567


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ++.+++.+||+.||++|||++++++||||++
T Consensus       259 ~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~  289 (312)
T 2iwi_A          259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQT  289 (312)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcChhhcC
Confidence            8899999999999999999999999999974


No 149
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.95  E-value=4.4e-30  Score=215.54  Aligned_cols=196  Identities=16%  Similarity=0.221  Sum_probs=135.0

Q ss_pred             CchhHHHhhh-hhhHHHHHHHHHHHHhhhh-----hhhhhhcCCCCCCCCcc----cccCCCCHHHHHHHHHHHHHhh-c
Q psy323            8 NPDVKVMENM-FVDAIIARIWIKAVMKKKK-----LLLKEILPIQPPHQHKN----LTRSSFSLTTFSKYVKQISQFV-Y   76 (255)
Q Consensus         8 ~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~-----~~~~~~~~~~~~l~~~~----~~~~~l~~~~~~~~~~qll~~l-y   76 (255)
                      .+|+.+++.+ .|+||++   +.+++....     ..++.++++........    .....+++..++.++.|++.|| |
T Consensus        68 ~~e~~~l~~l~~h~~i~~---~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~  144 (326)
T 2x7f_A           68 KQEINMLKKYSHHRNIAT---YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH  144 (326)
T ss_dssp             HHHHHHHHHHCCSTTBCC---EEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCeee---eeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence            3588889998 7999999   777776531     12244444443321111    1235699999999999999999 9


Q ss_pred             cC-----------CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhh-----cCCCCCchhHHHHHHH
Q psy323           77 MN-----------EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIY-----TKEFDMKIDIWSTACL  138 (255)
Q Consensus        77 lH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~-----~~~~~~~~DiwSlG~i  138 (255)
                      ||           +||++ +.++.+||+|||++....... ......+ +.|+|||++.     +..++.++||||+||+
T Consensus       145 lH~~~ivH~dlkp~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i  223 (326)
T 2x7f_A          145 LHQHKVIHRDIKGQNVLL-TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGIT  223 (326)
T ss_dssp             HHHTTCCCCCCSGGGEEE-CTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHH
T ss_pred             HHHCCccccCCcHHHEEE-cCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHH
Confidence            98           68888 578899999999998765421 2223345 8999999997     4468899999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCC
Q psy323          139 TFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKI  218 (255)
Q Consensus       139 l~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (255)
                      +++|++|..||.+..      ....+..+   ...+..                        ..               .
T Consensus       224 l~~l~~g~~p~~~~~------~~~~~~~~---~~~~~~------------------------~~---------------~  255 (326)
T 2x7f_A          224 AIEMAEGAPPLCDMH------PMRALFLI---PRNPAP------------------------RL---------------K  255 (326)
T ss_dssp             HHHHHHSSCTTTTSC------HHHHHHHH---HHSCCC------------------------CC---------------S
T ss_pred             HHHHHhCCCCCCCCc------HHHHHHHh---hcCccc------------------------cC---------------C
Confidence            999999999997543      22222211   111100                        00               1


Q ss_pred             ChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          219 PKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       219 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +...+..+.+||.+||..||.+|||++++++||||++
T Consensus       256 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~  292 (326)
T 2x7f_A          256 SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD  292 (326)
T ss_dssp             CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHC
T ss_pred             ccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhh
Confidence            1234678899999999999999999999999999864


No 150
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.95  E-value=7.9e-30  Score=213.80  Aligned_cols=194  Identities=14%  Similarity=0.248  Sum_probs=131.9

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhh-----hhhhcCCCCCCCCcccc--------cCCCCHHHHHHHHHHHHHh
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLL-----LKEILPIQPPHQHKNLT--------RSSFSLTTFSKYVKQISQF   74 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~-----~~~~~~~~~~l~~~~~~--------~~~l~~~~~~~~~~qll~~   74 (255)
                      .+|+.+++.+.|+||++   +.+++......     ++.++++..........        ...+++..++.++.|++.|
T Consensus        73 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a  149 (323)
T 3qup_A           73 LREAACMKEFDHPHVAK---LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG  149 (323)
T ss_dssp             HHHHHHHTTCCCTTBCC---CCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCceeh---hhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHH
Confidence            46899999999999999   88777654321     13444444332211111        1259999999999999999


Q ss_pred             h-ccC-----------CCceeeCCCCcEEEeecCccccCCCCcccccc---cc-ccccchhhhhcCCCCCchhHHHHHHH
Q psy323           75 V-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETICRED---IH-RQYKAVELIYTKEFDMKIDIWSTACL  138 (255)
Q Consensus        75 l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~---~~-~~y~aPE~l~~~~~~~~~DiwSlG~i  138 (255)
                      | |||           +|||+ +.++.+||+|||+++...........   .+ +.|+|||.+.+..++.++||||+||+
T Consensus       150 l~~LH~~~ivH~Dikp~NIli-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  228 (323)
T 3qup_A          150 MEYLSSRNFIHRDLAARNCML-AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVT  228 (323)
T ss_dssp             HHHHHHTTCCCSCCSGGGEEE-CTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHHHHcCCcccCCCCcceEEE-cCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHH
Confidence            9 998           78999 57899999999999876553222222   22 67999999999999999999999999


Q ss_pred             HHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcC
Q psy323          139 TFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYK  217 (255)
Q Consensus       139 l~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
                      +++|++ |..||.+..      ..+....+.....                                           ..
T Consensus       229 l~ell~~g~~p~~~~~------~~~~~~~~~~~~~-------------------------------------------~~  259 (323)
T 3qup_A          229 MWEIMTRGQTPYAGIE------NAEIYNYLIGGNR-------------------------------------------LK  259 (323)
T ss_dssp             HHHHHTTSCCTTTTCC------GGGHHHHHHTTCC-------------------------------------------CC
T ss_pred             HHHHHhCCCCCccccC------hHHHHHHHhcCCC-------------------------------------------CC
Confidence            999999 999998654      2222222211000                                           01


Q ss_pred             CChhhHHHHHHHHHhccccCCCCCCC-------HHHHhcCcCCC
Q psy323          218 IPKEDAKQLVRFLIPMLRLNPNKRET-------AEQCLQNEWLI  254 (255)
Q Consensus       218 ~~~~~~~~~~~li~~~L~~dP~~R~t-------~~e~l~hp~~~  254 (255)
                      .+...+.++.+++.+||+.||++|||       .+++++|||+.
T Consensus       260 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~  303 (323)
T 3qup_A          260 QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL  303 (323)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred             CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence            22345678999999999999999999       78888999985


No 151
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.95  E-value=1.4e-29  Score=211.44  Aligned_cols=189  Identities=13%  Similarity=0.163  Sum_probs=132.8

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc-c----CCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT-R----SSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~-~----~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+++++.+.|+||++   +.+++...+.. +.++++.......... .    ..+++..+..++.|++.|| |||   
T Consensus        82 ~~E~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  157 (309)
T 3p86_A           82 LREVAIMKRLRHPNIVL---FMGAVTQPPNL-SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN  157 (309)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECSTTCC-EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHhCCCCCEee---EEEEEEECCce-EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            45999999999999999   88888776653 4455554432222211 1    2399999999999999999 998   


Q ss_pred             ----------CCceeeCCCCcEEEeecCccccCCCCc-ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCC
Q psy323           79 ----------EELLYPTQNIEIVITDLEYVRPENDET-ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 ----------~niLl~~~~~~~kl~DfG~a~~~~~~~-~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~  146 (255)
                                +||++ +.++.+||+|||+++...... ......+ +.|+|||++.+..++.++||||+||++|+|++|+
T Consensus       158 ~~ivH~Dikp~NIll-~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  236 (309)
T 3p86_A          158 PPIVHRNLKSPNLLV-DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ  236 (309)
T ss_dssp             SCCCCTTCCGGGEEE-CTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCC
T ss_pred             CCEECCCCChhhEEE-eCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence                      57788 578899999999998655421 1223345 9999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+.+      .......+......                                          ...+...+.++
T Consensus       237 ~Pf~~~~------~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~l  268 (309)
T 3p86_A          237 QPWGNLN------PAQVVAAVGFKCKR------------------------------------------LEIPRNLNPQV  268 (309)
T ss_dssp             CTTTTSC------HHHHHHHHHHSCCC------------------------------------------CCCCTTSCHHH
T ss_pred             CCCCCCC------HHHHHHHHHhcCCC------------------------------------------CCCCccCCHHH
Confidence            9997543      22222211110000                                          01334567889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhc
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .+|+.+||+.||.+|||++++++
T Consensus       269 ~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          269 AAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999999999999986


No 152
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.95  E-value=1.4e-29  Score=211.21  Aligned_cols=194  Identities=15%  Similarity=0.256  Sum_probs=137.0

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc---ccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK---NLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+++++.+.|+||+.   +.+++.....  +.++++.......   ......+++.++..++.|++.|| |||     
T Consensus        80 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv  154 (307)
T 3lb7_A           80 RNEVAVLRKTRHVNILL---FMGYMTKDNL--AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNII  154 (307)
T ss_dssp             HHHHHHHTTCCCTTBCC---EEEEECSSSC--EEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhCCCCCEEE---EEEEEccCcE--EEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence            45899999999999998   7776554433  3333333332211   11346799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCC---Ccccccccc-ccccchhhhh---cCCCCCchhHHHHHHHHHHHhhC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPEND---ETICREDIH-RQYKAVELIY---TKEFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~---~~~~~~~~~-~~y~aPE~l~---~~~~~~~~DiwSlG~il~~l~~g  145 (255)
                            +|||+ +.++.+||+|||+++....   ........+ +.|+|||++.   +..++.++||||+||++++|++|
T Consensus       155 H~Dlkp~NIll-~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg  233 (307)
T 3lb7_A          155 HRDMKSNNIFL-HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG  233 (307)
T ss_dssp             CSCCCSSSEEE-CTTSCEEECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             eCCCChhhEEE-cCCCCEEEccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhC
Confidence                  79999 5888999999999986543   112233455 8999999997   44688899999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      +.||.+.+      ..+.+..+......++.                      ...                ....+++.
T Consensus       234 ~~Pf~~~~------~~~~~~~~~~~~~~~~~----------------------~~~----------------~~~~~~~~  269 (307)
T 3lb7_A          234 ELPYSHIN------NRDQIIFMVGRGYASPD----------------------LSK----------------LYKNCPKA  269 (307)
T ss_dssp             SCTTTTCC------CHHHHHHHHHHTCCCCC----------------------STT----------------SCSSSCHH
T ss_pred             CCCCccCC------cHHHHHHHHhcCCCCcc----------------------hhh----------------hhcCCcHH
Confidence            99998654      33333332221111110                      000                12345688


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCc
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQNE  251 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~hp  251 (255)
                      +.+++.+||+.||++|||+.+++++.
T Consensus       270 l~~li~~~l~~~p~~RPs~~~il~~l  295 (307)
T 3lb7_A          270 MKRLVADCVKKVKEERPLFPQILSSI  295 (307)
T ss_dssp             HHHHHHHHSCSSSTTSCCHHHHHHHH
T ss_pred             HHHHHHHHhhCChhhCcCHHHHHHHH
Confidence            99999999999999999999999764


No 153
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.95  E-value=3.4e-30  Score=211.59  Aligned_cols=195  Identities=17%  Similarity=0.262  Sum_probs=140.4

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhh-hhhhhhhhcCCCCCCCCccc------ccCCCCHHHHHHHHHHHHHhh-ccC-
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKK-KKLLLKEILPIQPPHQHKNL------TRSSFSLTTFSKYVKQISQFV-YMN-   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~~~------~~~~l~~~~~~~~~~qll~~l-ylH-   78 (255)
                      .+|+.+++.+.|+||++   +.+++.. .+..++.++++.........      ....+++..++.++.|++.|| ||| 
T Consensus        53 ~~e~~~l~~l~h~~i~~---~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  129 (279)
T 2w5a_A           53 VSEVNLLRELKHPNIVR---YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR  129 (279)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCe---EEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            45899999999999999   7776532 22223445555443211111      123599999999999999999 987 


Q ss_pred             ---------------CCceeeCCCCcEEEeecCccccCCCCccc-ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHH
Q psy323           79 ---------------EELLYPTQNIEIVITDLEYVRPENDETIC-REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFE  141 (255)
Q Consensus        79 ---------------~niLl~~~~~~~kl~DfG~a~~~~~~~~~-~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~  141 (255)
                                     +||++ +.++.+||+|||+++........ ....+ +.|+|||++.+..++.++||||+||++++
T Consensus       130 ~~~~~~~ivH~dl~p~NIl~-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  208 (279)
T 2w5a_A          130 RSDGGHTVLHRDLKPANVFL-DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE  208 (279)
T ss_dssp             HC------CCCCCSGGGEEE-CSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             ccCCCCeeEEeccchhhEEE-cCCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHH
Confidence                           47788 57889999999999877653222 22345 88999999999889999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChh
Q psy323          142 LVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKE  221 (255)
Q Consensus       142 l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
                      |++|..||.+.+      .......+..  +..          .                               ..+..
T Consensus       209 l~~g~~p~~~~~------~~~~~~~i~~--~~~----------~-------------------------------~~~~~  239 (279)
T 2w5a_A          209 LCALMPPFTAFS------QKELAGKIRE--GKF----------R-------------------------------RIPYR  239 (279)
T ss_dssp             HHHSSCSSCCSS------HHHHHHHHHH--TCC----------C-------------------------------CCCTT
T ss_pred             HHHCCCCCcccC------HHHHHHHHhh--ccc----------c-------------------------------cCCcc
Confidence            999999998543      2222222211  000          0                               02234


Q ss_pred             hHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          222 DAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       222 ~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+.++.+++.+||+.||++|||++++++|+|+++
T Consensus       240 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          240 YSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             cCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence            5688999999999999999999999999999873


No 154
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.95  E-value=4.8e-30  Score=214.40  Aligned_cols=194  Identities=16%  Similarity=0.212  Sum_probs=132.1

Q ss_pred             hhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC--------
Q psy323           10 DVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN--------   78 (255)
Q Consensus        10 e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH--------   78 (255)
                      +..+++.+.|+||++   +.+++...+.. +.++++...+.....  ..+.+++..+..++.|++.|| |||        
T Consensus        74 ~~~~~~~~~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~  149 (318)
T 2dyl_A           74 LDVVLKSHDCPYIVQ---CFGTFITNTDV-FIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR  149 (318)
T ss_dssp             HHHHHHTTTCTTBCC---EEEEEECSSEE-EEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred             HHHHHHhcCCCceee---EEEEEecCCcE-EEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeC
Confidence            445678889999999   88877766553 445555432222111  246799999999999999999 998        


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhh-----cCCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIY-----TKEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~-----~~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                          +||++ +.++.+||+|||++.............+ +.|+|||++.     +..++.++||||+||++++|++|+.|
T Consensus       150 dlkp~Nil~-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p  228 (318)
T 2dyl_A          150 DVKPSNILL-DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP  228 (318)
T ss_dssp             CCCGGGEEE-CTTSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCCHHHEEE-CCCCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCC
Confidence                57888 5788999999999987665433444455 9999999995     44688999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+...     ..+.+..+..  +.++ .                        . +             .....+.++.+
T Consensus       229 f~~~~~-----~~~~~~~~~~--~~~~-~------------------------~-~-------------~~~~~~~~l~~  262 (318)
T 2dyl_A          229 YKNCKT-----DFEVLTKVLQ--EEPP-L------------------------L-P-------------GHMGFSGDFQS  262 (318)
T ss_dssp             TTTCCS-----HHHHHHHHHH--SCCC-C------------------------C-C-------------SSSCCCHHHHH
T ss_pred             CCCCCc-----cHHHHHHHhc--cCCC-C------------------------C-C-------------ccCCCCHHHHH
Confidence            975320     2222222221  1100 0                        0 0             01234678899


Q ss_pred             HHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      ++.+||+.||.+|||++++++||||+
T Consensus       263 li~~~l~~dp~~Rps~~~ll~h~~~~  288 (318)
T 2dyl_A          263 FVKDCLTKDHRKRPKYNKLLEHSFIK  288 (318)
T ss_dssp             HHHHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred             HHHHHccCChhHCcCHHHHhhCHHHH
Confidence            99999999999999999999999985


No 155
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.95  E-value=5.6e-30  Score=223.12  Aligned_cols=198  Identities=12%  Similarity=0.189  Sum_probs=135.1

Q ss_pred             CCchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc--cCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT--RSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      ..+|+.+|+.+ .|+||++   ++.++...+.. +.++++........+.  ...+++..+..++.|++.|| |||    
T Consensus        64 ~~~E~~~l~~l~~HpnIv~---l~~~~~~~~~~-~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  139 (432)
T 3p23_A           64 ADREVQLLRESDEHPNVIR---YFCTEKDRQFQ-YIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI  139 (432)
T ss_dssp             CHHHHHHHHHSCCCTTBCC---EEEEEEETTEE-EEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhccCCCCcCe---EEEEEecCCEE-EEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcC
Confidence            45699999999 7999999   87777665553 4444444332111111  12355667789999999999 998    


Q ss_pred             -------CCceeeC----CCCcEEEeecCccccCCCCc----ccccccc-ccccchhhhhc---CCCCCchhHHHHHHHH
Q psy323           79 -------EELLYPT----QNIEIVITDLEYVRPENDET----ICREDIH-RQYKAVELIYT---KEFDMKIDIWSTACLT  139 (255)
Q Consensus        79 -------~niLl~~----~~~~~kl~DfG~a~~~~~~~----~~~~~~~-~~y~aPE~l~~---~~~~~~~DiwSlG~il  139 (255)
                             +|||+..    ....+||+|||+|+......    ..+..++ +.|+|||++.+   ..++.++||||+||++
T Consensus       140 vHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il  219 (432)
T 3p23_A          140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF  219 (432)
T ss_dssp             CCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHH
T ss_pred             EeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHH
Confidence                   7999942    22368899999998776421    2233456 99999999984   4667899999999999


Q ss_pred             HHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCC
Q psy323          140 FELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKI  218 (255)
Q Consensus       140 ~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (255)
                      ++|++ |..||.+..       ..+...   ..+.....                       ...              .
T Consensus       220 ~ellt~g~~pf~~~~-------~~~~~~---~~~~~~~~-----------------------~~~--------------~  252 (432)
T 3p23_A          220 YYVISEGSHPFGKSL-------QRQANI---LLGACSLD-----------------------CLH--------------P  252 (432)
T ss_dssp             HHHHTTSCBTTBSTT-------THHHHH---HTTCCCCT-----------------------TSC--------------T
T ss_pred             HHHHcCCCCCcchhh-------HHHHHH---HhccCCcc-----------------------ccC--------------c
Confidence            99999 999996432       111111   11111000                       000              1


Q ss_pred             ChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          219 PKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       219 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      ....+..+.+||.+||+.||++|||++++++||||..
T Consensus       253 ~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          253 EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             cccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence            1234677889999999999999999999999999963


No 156
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.95  E-value=1.5e-29  Score=216.40  Aligned_cols=190  Identities=16%  Similarity=0.249  Sum_probs=140.7

Q ss_pred             CCchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc------------------ccCCCCHHHHHHH
Q psy323            7 VNPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL------------------TRSSFSLTTFSKY   67 (255)
Q Consensus         7 ~~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~------------------~~~~l~~~~~~~~   67 (255)
                      +.+|+.+++.+ .|+||++   +++++...+.+ +.++++.........                  ....+++..+..+
T Consensus       133 ~~~E~~~l~~l~~hpnIv~---~~~~~~~~~~~-~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  208 (370)
T 2psq_A          133 LVSEMEMMKMIGKHKNIIN---LLGACTQDGPL-YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC  208 (370)
T ss_dssp             HHHHHHHHHHSCCCTTBCC---EEEEECSSSSC-EEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCEee---EEEEEccCCCE-EEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHH
Confidence            34589999999 8999999   88888776653 445555443221111                  1245899999999


Q ss_pred             HHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccc---ccccc-ccccchhhhhcCCCCCchh
Q psy323           68 VKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETIC---REDIH-RQYKAVELIYTKEFDMKID  131 (255)
Q Consensus        68 ~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~-~~y~aPE~l~~~~~~~~~D  131 (255)
                      +.|++.|| |||           +|||+ +.++.+||+|||+++........   ....+ +.|+|||++.+..++.++|
T Consensus       209 ~~qi~~aL~~LH~~~ivHrDlkp~NIll-~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  287 (370)
T 2psq_A          209 TYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  287 (370)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCCGGGEEE-CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHH
T ss_pred             HHHHHHHHHHHHhCCeeccccchhhEEE-CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHH
Confidence            99999999 998           78999 58899999999999876543221   12223 7899999999999999999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHH
Q psy323          132 IWSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYR  210 (255)
Q Consensus       132 iwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (255)
                      |||+||++|+|++ |..||.+..      ..+....+.... .                                     
T Consensus       288 vwslG~il~ellt~g~~p~~~~~------~~~~~~~~~~~~-~-------------------------------------  323 (370)
T 2psq_A          288 VWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLKEGH-R-------------------------------------  323 (370)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCC------GGGHHHHHHTTC-C-------------------------------------
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHhcCC-C-------------------------------------
Confidence            9999999999999 999998643      112111111100 0                                     


Q ss_pred             HHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          211 ILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                           ...+..++.++.+++.+||+.||++|||+.+++++
T Consensus       324 -----~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          324 -----MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 01234566889999999999999999999999864


No 157
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.95  E-value=4.7e-30  Score=215.86  Aligned_cols=190  Identities=14%  Similarity=0.217  Sum_probs=138.2

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhh-hhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKL-LLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      .+|+.+++.+.|+||++   +++++..... ++++++........-....+.+++..+..++.|++.|| |||       
T Consensus        65 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~  141 (327)
T 3poz_A           65 LDEAYVMASVDNPHVCR---LLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR  141 (327)
T ss_dssp             HHHHHHHHHCCBTTBCC---EEEEEESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             HHHHHHHHhCCCCCEeE---EEEEEecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCC
Confidence            45899999999999999   8887776554 33333333221111111235699999999999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCCccccc---ccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCCCC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDETICRE---DIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDYMF  149 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~---~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~pf  149 (255)
                          +|||+ +.++.+||+|||+|+..........   ..+ +.|+|||++.+..++.++||||+||++++|++ |+.||
T Consensus       142 Dikp~NIll-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~  220 (327)
T 3poz_A          142 DLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY  220 (327)
T ss_dssp             CCCGGGEEE-EETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCChheEEE-CCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCc
Confidence                78999 4788999999999987755322211   222 68999999999999999999999999999999 99999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+..      . ..+.........+                                          ..+...+.++.++
T Consensus       221 ~~~~------~-~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~l  251 (327)
T 3poz_A          221 DGIP------A-SEISSILEKGERL------------------------------------------PQPPICTIDVYMI  251 (327)
T ss_dssp             TTCC------G-GGHHHHHHTTCCC------------------------------------------CCCTTBCHHHHHH
T ss_pred             cCCC------H-HHHHHHHHcCCCC------------------------------------------CCCccCCHHHHHH
Confidence            8654      1 1222221111100                                          0223456788999


Q ss_pred             HHhccccCCCCCCCHHHHhcC
Q psy323          230 LIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~h  250 (255)
                      +.+||+.||++|||+.+++++
T Consensus       252 i~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          252 MVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHcCCChhhCCCHHHHHHH
Confidence            999999999999999999864


No 158
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.95  E-value=8.1e-30  Score=214.17  Aligned_cols=192  Identities=15%  Similarity=0.213  Sum_probs=137.5

Q ss_pred             CCCchhHHHhhhhhhHHHHHHHHHHHHhhhhh-hhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            6 PVNPDVKVMENMFVDAIIARIWIKAVMKKKKL-LLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         6 ~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+.+|+.+++.+.|+||++   +++++..... ++++++........-....+.+++..+..++.|++.|| |||     
T Consensus        61 ~~~~e~~~l~~l~h~~iv~---~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  137 (325)
T 3kex_A           61 AVTDHMLAIGSLDHAHIVR---LLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV  137 (325)
T ss_dssp             SCCHHHHHHHTCCCTTBCC---EEEEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhcCCCCCcCe---EEEEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            4566999999999999999   8887764433 33444332221111111235799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcc---cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETI---CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDY  147 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~---~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~  147 (255)
                            +|||+ +.++.+||+|||+++.......   .....+ +.|+|||++.+..++.++||||+||++|+|++ |..
T Consensus       138 H~Dikp~Nil~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~  216 (325)
T 3kex_A          138 HRNLAARNVLL-KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAE  216 (325)
T ss_dssp             CSCCSSTTEEE-SSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCccchheEEE-CCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCC
Confidence                  79999 5888999999999998755321   122233 68999999999999999999999999999999 999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+...      ......+.. ...+                                          ..+...+.++.
T Consensus       217 p~~~~~~------~~~~~~~~~-~~~~------------------------------------------~~~~~~~~~~~  247 (325)
T 3kex_A          217 PYAGLRL------AEVPDLLEK-GERL------------------------------------------AQPQICTIDVY  247 (325)
T ss_dssp             TTTTSCT------THHHHHHHT-TCBC------------------------------------------CCCTTBCTTTT
T ss_pred             CccccCH------HHHHHHHHc-CCCC------------------------------------------CCCCcCcHHHH
Confidence            9986531      111111111 0000                                          01233456778


Q ss_pred             HHHHhccccCCCCCCCHHHHhcC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      +++.+||+.||++|||+.+++++
T Consensus       248 ~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          248 MVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999875


No 159
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.95  E-value=8.4e-31  Score=218.84  Aligned_cols=197  Identities=15%  Similarity=0.194  Sum_probs=137.5

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhh---hhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKL---LLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~---~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+.+++.+.|+||++   +++++.....   ..+.++++.......  ....+.+++..++.++.|++.|| |||   
T Consensus        60 ~~E~~~l~~l~hp~iv~---~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (311)
T 3ork_A           60 RREAQNAAALNHPAIVA---VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG  136 (311)
T ss_dssp             HHHHTTCCCCCCTTBCC---EEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHcCCCCCcce---EEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45888889999999999   7777665432   123444444332211  12245799999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCc----ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDET----ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~----~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g  145 (255)
                              +||++ +.++.+||+|||+++......    ......+ +.|+|||++.+..++.++||||+||++|+|++|
T Consensus       137 ivH~dlkp~Nil~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g  215 (311)
T 3ork_A          137 IIHRDVKPANIMI-SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG  215 (311)
T ss_dssp             CCCCCCCGGGEEE-ETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             CCcCCCCHHHEEE-cCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhC
Confidence                    78999 578899999999998765421    1222345 899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      +.||.+..      ........... ...+...                                       .....+.+
T Consensus       216 ~~pf~~~~------~~~~~~~~~~~-~~~~~~~---------------------------------------~~~~~~~~  249 (311)
T 3ork_A          216 EPPFTGDS------PVSVAYQHVRE-DPIPPSA---------------------------------------RHEGLSAD  249 (311)
T ss_dssp             SCSCCCSS------HHHHHHHHHHC-CCCCHHH---------------------------------------HSTTCCHH
T ss_pred             CCCCCCCC------hHHHHHHHhcC-CCCCccc---------------------------------------ccCCCCHH
Confidence            99998643      22222222111 1111000                                       01235678


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      +.+++.+||+.||++||++.+++.|+|++
T Consensus       250 l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          250 LDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            89999999999999999999999999864


No 160
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.95  E-value=1.1e-29  Score=207.59  Aligned_cols=190  Identities=14%  Similarity=0.216  Sum_probs=141.1

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc---cccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN---LTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+++++.+.|+||++   +.+++...+.. +.++++........   ...+.+++..++.++.|++.|| |||    
T Consensus        52 ~~~E~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  127 (269)
T 4hcu_A           52 FIEEAEVMMKLSHPKLVQ---LYGVCLEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV  127 (269)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEECSSSSE-EEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCCCEee---EEEEEecCCce-EEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            346999999999999999   88888776653 44445444322221   1234699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcc--cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETI--CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDY  147 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~--~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~  147 (255)
                             +||++ +.++.+||+|||+++.......  .....+ +.|+|||++.+..++.++||||+||++++|++ |..
T Consensus       128 ~H~dikp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~  206 (269)
T 4hcu_A          128 IHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI  206 (269)
T ss_dssp             CCSCCCGGGEEE-CGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ecCCcchheEEE-cCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCC
Confidence                   68888 5778999999999987655221  112223 67999999999999999999999999999999 999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+..      ..+....+......                                           ..+...+.++.
T Consensus       207 p~~~~~------~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~  237 (269)
T 4hcu_A          207 PYENRS------NSEVVEDISTGFRL-------------------------------------------YKPRLASTHVY  237 (269)
T ss_dssp             TTTTCC------HHHHHHHHHTTCCC-------------------------------------------CCCTTSCHHHH
T ss_pred             CCCCCC------HHHHHHHHhcCccC-------------------------------------------CCCCcCCHHHH
Confidence            998543      22222222111000                                           02234567889


Q ss_pred             HHHHhccccCCCCCCCHHHHhcC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      +++.+||+.||++|||+.++++|
T Consensus       238 ~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          238 QIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHccCCcccCcCHHHHHHH
Confidence            99999999999999999999875


No 161
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.95  E-value=2.1e-29  Score=214.12  Aligned_cols=144  Identities=14%  Similarity=0.297  Sum_probs=111.3

Q ss_pred             CCCHHHHHHHHHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccc---ccccc-ccccchhhh
Q psy323           58 SFSLTTFSKYVKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETIC---REDIH-RQYKAVELI  121 (255)
Q Consensus        58 ~l~~~~~~~~~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~-~~y~aPE~l  121 (255)
                      .+++..++.++.|++.|| |||           +|||+ +.++.+||+|||+++........   ....+ +.|+|||++
T Consensus       189 ~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~  267 (359)
T 3vhe_A          189 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL-SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI  267 (359)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-CGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE-cCCCcEEEEeccceeeecccccchhccccCCCceeEChhhh
Confidence            399999999999999999 998           78999 57889999999999876543221   12233 789999999


Q ss_pred             hcCCCCCchhHHHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccc
Q psy323          122 YTKEFDMKIDIWSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNIT  200 (255)
Q Consensus       122 ~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (255)
                      .+..++.++||||+||++++|++ |..||.+..      ....+.........+                          
T Consensus       268 ~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~~~~~~~~~~--------------------------  315 (359)
T 3vhe_A          268 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK------IDEEFCRRLKEGTRM--------------------------  315 (359)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC------CSHHHHHHHHHTCCC--------------------------
T ss_pred             cCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc------hhHHHHHHHHcCCCC--------------------------
Confidence            99999999999999999999998 999998654      122222221111100                          


Q ss_pred             cCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          201 SMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                                      ..+...+.++.+++.+||+.||++|||+.++++|
T Consensus       316 ----------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          316 ----------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             ----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence                            1223456789999999999999999999999876


No 162
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.95  E-value=1.8e-29  Score=212.22  Aligned_cols=189  Identities=14%  Similarity=0.233  Sum_probs=139.8

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.........   ..+.+++..+..++.|++.|| |||    
T Consensus        97 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  172 (325)
T 3kul_A           97 FLSEASIMGQFDHPNIIR---LEGVVTRGRLA-MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY  172 (325)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEECGGGCC-EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHhCCCCCCCc---EEEEEEeCCcc-EEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345999999999999999   88888776653 445555444322222   235799999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCccc----ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-C
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETIC----REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-G  145 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g  145 (255)
                             +|||+ +.++.+||+|||+++........    ....+ +.|+|||++.+..++.++||||+||++++|++ |
T Consensus       173 vH~Dlkp~NIll-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g  251 (325)
T 3kul_A          173 VHRDLAARNVLV-DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG  251 (325)
T ss_dssp             ECSCCSGGGEEE-CTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             eCCCCCcceEEE-CCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence                   78999 58899999999999887653211    11122 57999999998889999999999999999999 9


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      ..||.+..      ..+....+......                                           ..+..++.+
T Consensus       252 ~~p~~~~~------~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~  282 (325)
T 3kul_A          252 ERPYWNMT------NRDVISSVEEGYRL-------------------------------------------PAPMGCPHA  282 (325)
T ss_dssp             CCTTTTSC------HHHHHHHHHTTCCC-------------------------------------------CCCTTCCHH
T ss_pred             CCCcccCC------HHHHHHHHHcCCCC-------------------------------------------CCCCCcCHH
Confidence            99997543      22222222111000                                           122356688


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhc
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      +.+++.+||..||++|||+.++++
T Consensus       283 l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          283 LHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999999875


No 163
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.95  E-value=6.6e-30  Score=214.70  Aligned_cols=193  Identities=16%  Similarity=0.224  Sum_probs=121.2

Q ss_pred             HHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc------cccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323           13 VMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN------LTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus        13 ~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      +++.+.|+||++   +.+++...+.. +.++++........      .....+++..+..++.|++.|| |||       
T Consensus        74 ~~~~~~h~niv~---~~~~~~~~~~~-~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH  149 (327)
T 3aln_A           74 VMRSSDCPYIVQ---FYGALFREGDC-WICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIH  149 (327)
T ss_dssp             HHSSCCCTTBCC---EEEEEECSSEE-EEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred             HHHcCCCCcEee---eeeEEEeCCce-EEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeE
Confidence            677789999999   88877766553 44455444321111      1246799999999999999999 997       


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhh----hcCCCCCchhHHHHHHHHHHHhhCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELI----YTKEFDMKIDIWSTACLTFELVTGDYM  148 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l----~~~~~~~~~DiwSlG~il~~l~~g~~p  148 (255)
                           +||++ +.++.+||+|||+++............+ +.|+|||++    .+..++.++||||+||++++|++|+.|
T Consensus       150 ~dlkp~NIll-~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p  228 (327)
T 3aln_A          150 RDIKPSNILL-DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP  228 (327)
T ss_dssp             SCCCGGGEEE-ETTTEEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCHHHEEE-cCCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCC
Confidence                 68888 5888999999999987765433344456 899999999    455789999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+....     .+.   +.......                        ...+..            ......+.++.+
T Consensus       229 f~~~~~~-----~~~---~~~~~~~~------------------------~~~~~~------------~~~~~~~~~l~~  264 (327)
T 3aln_A          229 YPKWNSV-----FDQ---LTQVVKGD------------------------PPQLSN------------SEEREFSPSFIN  264 (327)
T ss_dssp             SSCC---------------CCCCCSC------------------------CCCCCC------------CSSCCCCHHHHH
T ss_pred             CCCcchH-----HHH---HHHHhcCC------------------------CCCCCC------------cccccCCHHHHH
Confidence            9854310     000   00000000                        000000            011235678999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      |+.+||+.||++|||+.++++||||+
T Consensus       265 li~~~l~~dp~~Rps~~ell~hp~~~  290 (327)
T 3aln_A          265 FVNLCLTKDESKRPKYKELLKHPFIL  290 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             HHHHHhhCChhhCcCHHHHHhChHHH
Confidence            99999999999999999999999985


No 164
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.95  E-value=9.5e-30  Score=209.35  Aligned_cols=188  Identities=16%  Similarity=0.238  Sum_probs=128.1

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|+||++   +.+++.....  +.++++.........   ....+++..+..++.|++.|| |||     
T Consensus        64 ~~e~~~l~~l~h~~iv~---~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  138 (281)
T 1mp8_A           64 LQEALTMRQFDHPHIVK---LIGVITENPV--WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV  138 (281)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEECSSSC--EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhCCCCccce---EEEEEccCcc--EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            45899999999999999   7777654332  334444333221111   124699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCccccc--ccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICRE--DIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDYM  148 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~--~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~p  148 (255)
                            +|||+ +.++.+||+|||+++..........  ..+ +.|+|||++.+..++.++||||+||++++|++ |..|
T Consensus       139 H~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p  217 (281)
T 1mp8_A          139 HRDIAARNVLV-SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  217 (281)
T ss_dssp             CSCCSGGGEEE-EETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cccccHHHEEE-CCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCC
Confidence                  78999 4788999999999987755322222  223 68999999999899999999999999999996 9999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+..      ..+....+......                                           ..+...+.++.+
T Consensus       218 f~~~~------~~~~~~~i~~~~~~-------------------------------------------~~~~~~~~~l~~  248 (281)
T 1mp8_A          218 FQGVK------NNDVIGRIENGERL-------------------------------------------PMPPNCPPTLYS  248 (281)
T ss_dssp             TTTCC------GGGHHHHHHTTCCC-------------------------------------------CCCTTCCHHHHH
T ss_pred             CCcCC------HHHHHHHHHcCCCC-------------------------------------------CCCCCCCHHHHH
Confidence            98654      22222222110000                                           122355688999


Q ss_pred             HHHhccccCCCCCCCHHHHhcC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      ++.+||+.||++|||+.+++++
T Consensus       249 li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          249 LMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHH
Confidence            9999999999999999998863


No 165
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.95  E-value=1.4e-29  Score=217.00  Aligned_cols=191  Identities=14%  Similarity=0.248  Sum_probs=141.1

Q ss_pred             CCCCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            5 APVNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         5 ~~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      +.+.+|+++|+.+.|+||++   +++++...+.. +.++++.........   ....+++..+..++.|++.|| |||  
T Consensus       157 ~~~~~E~~~l~~l~hpniv~---~~~~~~~~~~~-~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  232 (377)
T 3cbl_A          157 AKFLQEARILKQYSHPNIVR---LIGVCTQKQPI-YIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK  232 (377)
T ss_dssp             TTTTHHHHHHTTCCCTTBCC---EEEEECSSSSC-EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCCCEEE---EEEEEecCCCc-EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            35677999999999999999   88888766553 445555443222111   124599999999999999999 998  


Q ss_pred             ---------CCceeeCCCCcEEEeecCccccCCCCccccc---ccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-
Q psy323           79 ---------EELLYPTQNIEIVITDLEYVRPENDETICRE---DIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-  144 (255)
Q Consensus        79 ---------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~---~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-  144 (255)
                               +|||+ +.++.+||+|||+++..........   ..+ +.|+|||++.+..++.++||||+||++|+|++ 
T Consensus       233 ~ivHrDlkp~Nil~-~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~  311 (377)
T 3cbl_A          233 CCIHRDLAARNCLV-TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSL  311 (377)
T ss_dssp             TEECSCCSGGGEEE-CTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             CcCCcccCHHHEEE-cCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhC
Confidence                     78999 5788999999999987654211111   112 67999999998889999999999999999998 


Q ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHH
Q psy323          145 GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAK  224 (255)
Q Consensus       145 g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      |..||.+..      . ............+                                          ..+..++.
T Consensus       312 g~~p~~~~~------~-~~~~~~~~~~~~~------------------------------------------~~~~~~~~  342 (377)
T 3cbl_A          312 GASPYPNLS------N-QQTREFVEKGGRL------------------------------------------PCPELCPD  342 (377)
T ss_dssp             SCCSSTTSC------H-HHHHHHHHTTCCC------------------------------------------CCCTTCCH
T ss_pred             CCCCCCCCC------H-HHHHHHHHcCCCC------------------------------------------CCCCCCCH
Confidence            999998543      1 2221111110100                                          12234567


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhc
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ++.+++.+||+.||++|||++++++
T Consensus       343 ~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          343 AVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHH
Confidence            8899999999999999999999875


No 166
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.95  E-value=2e-29  Score=212.02  Aligned_cols=189  Identities=14%  Similarity=0.206  Sum_probs=131.5

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhh-hhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKL-LLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      .+|+.+++.+.|+||++   +++++..... ++++++........-....+.+++..+..++.|++.|| |||       
T Consensus        65 ~~E~~~l~~l~hp~iv~---~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~  141 (327)
T 3lzb_A           65 LDEAYVMASVDNPHVCR---LLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR  141 (327)
T ss_dssp             HHHHHHHTTCCBTTBCC---CCEEEESSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             HHHHHHHHhCCCCCeeE---EEEEEecCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCC
Confidence            34899999999999999   8887776553 23333222111111111235699999999999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCCcccc---cccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCCCC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDETICR---EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDYMF  149 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~---~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~pf  149 (255)
                          +|||+ +.++.+||+|||+++.........   ...+ +.|+|||++.+..++.++||||+||++|+|++ |..||
T Consensus       142 Dikp~NIl~-~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~  220 (327)
T 3lzb_A          142 DLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY  220 (327)
T ss_dssp             CCCGGGEEE-EETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCCHHHEEE-cCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCC
Confidence                78999 478899999999998775432221   1222 67999999999999999999999999999999 99999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+..      ... +.........+                                          ..+...+.++.++
T Consensus       221 ~~~~------~~~-~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~l  251 (327)
T 3lzb_A          221 DGIP------ASE-ISSILEKGERL------------------------------------------PQPPICTIDVYMI  251 (327)
T ss_dssp             TTCC------GGG-HHHHHHTTCCC------------------------------------------CCCTTBCHHHHHH
T ss_pred             CCCC------HHH-HHHHHHcCCCC------------------------------------------CCCccCCHHHHHH
Confidence            8654      111 21111111000                                          1223456789999


Q ss_pred             HHhccccCCCCCCCHHHHhc
Q psy323          230 LIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~  249 (255)
                      +.+||..||.+|||+.++++
T Consensus       252 i~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          252 MRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999986


No 167
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.95  E-value=4.2e-29  Score=205.55  Aligned_cols=189  Identities=17%  Similarity=0.261  Sum_probs=141.3

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+++++.+.|+||++   +.+++...+.. +.++++.........   ....+++..++.++.|++.|| |||     
T Consensus        67 ~~E~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~  142 (283)
T 3gen_A           67 IEEAKVMMNLSHEKLVQ---LYGVCTKQRPI-FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL  142 (283)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEECSSSSE-EEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHhcCCCCCEee---EEEEEecCCCe-EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            46999999999999999   88888766653 455555443322211   135699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCccc--ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETIC--REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDYM  148 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~--~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~p  148 (255)
                            +||++ +.++.+||+|||+++........  ....+ +.|+|||++.+..++.++||||+|+++++|++ |+.|
T Consensus       143 H~dikp~Nili-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p  221 (283)
T 3gen_A          143 HRDLAARNCLV-NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP  221 (283)
T ss_dssp             CSSCSGGGEEE-CTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             CCCCccceEEE-cCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                  68888 58889999999999876552211  11222 67999999999999999999999999999998 9999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+.+      .......+.+....                                           ..+...+..+.+
T Consensus       222 ~~~~~------~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~l~~  252 (283)
T 3gen_A          222 YERFT------NSETAEHIAQGLRL-------------------------------------------YRPHLASEKVYT  252 (283)
T ss_dssp             TTTSC------HHHHHHHHHTTCCC-------------------------------------------CCCTTCCHHHHH
T ss_pred             ccccC------hhHHHHHHhcccCC-------------------------------------------CCCCcCCHHHHH
Confidence            98553      22222222211100                                           012344578899


Q ss_pred             HHHhccccCCCCCCCHHHHhcC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      ++.+||+.||++|||++++++|
T Consensus       253 li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          253 IMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHccCChhHCcCHHHHHHH
Confidence            9999999999999999999875


No 168
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.95  E-value=3e-29  Score=218.79  Aligned_cols=198  Identities=16%  Similarity=0.230  Sum_probs=132.3

Q ss_pred             CchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccccC--------CCCHHHHHHHHHHHHHhh-cc
Q psy323            8 NPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLTRS--------SFSLTTFSKYVKQISQFV-YM   77 (255)
Q Consensus         8 ~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~l~~~~~~~~~~qll~~l-yl   77 (255)
                      .+|+.+|+.+ .||||++   +++++...+.+ +.++++........+...        ..++..+..++.|++.|| ||
T Consensus        56 ~~E~~~l~~l~~HpnIv~---~~~~~~~~~~~-~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  131 (434)
T 2rio_A           56 LMEIKLLTESDDHPNVIR---YYCSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL  131 (434)
T ss_dssp             HHHHHHHHHHTTSTTBCC---EEEEEECSSEE-EEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCcCe---EEEEEecCCeE-EEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH
Confidence            3588999886 8999999   77776665543 445554432111111111        123445678999999999 99


Q ss_pred             C-----------CCceeeC------------CCCcEEEeecCccccCCCCcc-----cccccc-ccccchhhhhc-----
Q psy323           78 N-----------EELLYPT------------QNIEIVITDLEYVRPENDETI-----CREDIH-RQYKAVELIYT-----  123 (255)
Q Consensus        78 H-----------~niLl~~------------~~~~~kl~DfG~a~~~~~~~~-----~~~~~~-~~y~aPE~l~~-----  123 (255)
                      |           +|||+..            .++.+||+|||+|+.......     ....++ +.|+|||++.+     
T Consensus       132 H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  211 (434)
T 2rio_A          132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQ  211 (434)
T ss_dssp             HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTS
T ss_pred             HHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccc
Confidence            8           7899953            235899999999988765321     223355 99999999976     


Q ss_pred             --CCCCCchhHHHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccc
Q psy323          124 --KEFDMKIDIWSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNIT  200 (255)
Q Consensus       124 --~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (255)
                        ..++.++||||+||++++|++ |..||.+..      .. . ..+.......+                      ...
T Consensus       212 ~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~------~~-~-~~i~~~~~~~~----------------------~~~  261 (434)
T 2rio_A          212 TKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY------SR-E-SNIIRGIFSLD----------------------EMK  261 (434)
T ss_dssp             CCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT------TH-H-HHHHHTCCCCC----------------------CCT
T ss_pred             cccCcchhhhhHhHHHHHHHHHhCCCCCCCCch------hh-H-HHHhcCCCCcc----------------------ccc
Confidence              468899999999999999998 999996432      11 1 11211110000                      000


Q ss_pred             cCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          201 SMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      ..               .+...+.++.+|+.+||+.||++|||+.++++||||.
T Consensus       262 ~~---------------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          262 CL---------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             TC---------------CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             cc---------------ccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence            00               1235678899999999999999999999999999996


No 169
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.95  E-value=2.1e-28  Score=205.05  Aligned_cols=205  Identities=12%  Similarity=0.137  Sum_probs=141.9

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc------cccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN------LTRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++........      .....+++..+..++.|++.|| |||  
T Consensus        83 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  158 (321)
T 2qkw_B           83 ETEIETLSFCRHPHLVS---LIGFCDERNEM-ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR  158 (321)
T ss_dssp             HHHHHGGGSCCCTTBCC---EEEECCCTTCC-EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCEee---EEEEEcCCCeE-EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC
Confidence            45899999999999999   88888766653 34444433322111      1223599999999999999999 998  


Q ss_pred             ---------CCceeeCCCCcEEEeecCccccCCCCc---ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhC
Q psy323           79 ---------EELLYPTQNIEIVITDLEYVRPENDET---ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 ---------~niLl~~~~~~~kl~DfG~a~~~~~~~---~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g  145 (255)
                               +||++ +.++.+||+|||+++......   ......+ +.|+|||++.+..++.++||||+||++++|++|
T Consensus       159 ~ivH~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g  237 (321)
T 2qkw_B          159 AIIHRDVKSINILL-DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA  237 (321)
T ss_dssp             TEECSCCCSTTEEE-CTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHC
T ss_pred             CeecCCCCHHHEEE-CCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhC
Confidence                     78999 588999999999998654321   1222335 899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      +.||.+.......   ............        ...    ....+      .....            ..+...+..
T Consensus       238 ~~p~~~~~~~~~~---~~~~~~~~~~~~--------~~~----~~~~~------~~~~~------------~~~~~~~~~  284 (321)
T 2qkw_B          238 RSAIVQSLPREMV---NLAEWAVESHNN--------GQL----EQIVD------PNLAD------------KIRPESLRK  284 (321)
T ss_dssp             CTTCSCSSSSSCC---CHHHHTHHHHTT--------TCC----CSSSS------SSCTT------------CSCHHHHHH
T ss_pred             CCcccccCcHHHH---HHHHHhhhcccc--------ccH----HHhcC------hhhcc------------ccCHHHHHH
Confidence            9999865422111   111000000000        000    00000      00000            133567889


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcC
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      +.+++.+||+.||++|||+.+++++
T Consensus       285 l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          285 FGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHHH
Confidence            9999999999999999999999875


No 170
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.95  E-value=2.2e-29  Score=205.65  Aligned_cols=189  Identities=14%  Similarity=0.214  Sum_probs=139.5

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+++++.+.|+||++   +.+++...+.. +.++++.........   ....+++..++.++.|++.|| |||     
T Consensus        51 ~~E~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~  126 (268)
T 3sxs_A           51 FQEAQTMMKLSHPKLVK---FYGVCSKEYPI-YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFI  126 (268)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECSSSSE-EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhCCCCCEee---EEEEEccCCce-EEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            45899999999999999   88887766553 444444433222211   124599999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcccc--cccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICR--EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDYM  148 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~--~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~p  148 (255)
                            +||++ +.++.+||+|||++..........  ...+ +.|+|||++.+..++.++||||+|+++++|++ |..|
T Consensus       127 H~dikp~Nil~-~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p  205 (268)
T 3sxs_A          127 HRDLAARNCLV-DRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP  205 (268)
T ss_dssp             ESSCSGGGEEE-CTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCT
T ss_pred             cCCcCcceEEE-CCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCC
Confidence                  78898 588899999999998765532221  1122 67999999999889999999999999999998 9999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+..      .......+......                                           ..+...+.++.+
T Consensus       206 ~~~~~------~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~l~~  236 (268)
T 3sxs_A          206 YDLYT------NSEVVLKVSQGHRL-------------------------------------------YRPHLASDTIYQ  236 (268)
T ss_dssp             TTTSC------HHHHHHHHHTTCCC-------------------------------------------CCCTTSCHHHHH
T ss_pred             ccccC------hHHHHHHHHcCCCC-------------------------------------------CCCCcChHHHHH
Confidence            97543      22222221110000                                           012344678899


Q ss_pred             HHHhccccCCCCCCCHHHHhcC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      ++.+||+.||++|||+.+++++
T Consensus       237 li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          237 IMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999875


No 171
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.95  E-value=6.6e-29  Score=213.16  Aligned_cols=189  Identities=15%  Similarity=0.258  Sum_probs=139.9

Q ss_pred             CchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc------------------ccCCCCHHHHHHHH
Q psy323            8 NPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL------------------TRSSFSLTTFSKYV   68 (255)
Q Consensus         8 ~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~------------------~~~~l~~~~~~~~~   68 (255)
                      .+|+++++.+ .|+||++   +.+++...+.. +.++++.........                  ....+++..++.++
T Consensus       122 ~~E~~~l~~l~~hpnIv~---~~~~~~~~~~~-~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  197 (382)
T 3tt0_A          122 ISEMEMMKMIGKHKNIIN---LLGACTQDGPL-YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA  197 (382)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEECSSSSC-EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHhcCCchhhh---heeeeccCCce-EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHH
Confidence            3589999999 9999999   88888776653 444444433211111                  12459999999999


Q ss_pred             HHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCcc---cccccc-ccccchhhhhcCCCCCchhH
Q psy323           69 KQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETI---CREDIH-RQYKAVELIYTKEFDMKIDI  132 (255)
Q Consensus        69 ~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~---~~~~~~-~~y~aPE~l~~~~~~~~~Di  132 (255)
                      .|++.|| |||           +|||+ +.++.+||+|||+|+.......   .....+ +.|+|||++.+..++.++||
T Consensus       198 ~qi~~aL~~LH~~~ivH~Dlkp~NIll-~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di  276 (382)
T 3tt0_A          198 YQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV  276 (382)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEE-CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHH
T ss_pred             HHHHHHHHHHHhCCEecCCCCcceEEE-cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHH
Confidence            9999999 998           79999 5788999999999987754321   222233 78999999999999999999


Q ss_pred             HHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHH
Q psy323          133 WSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRI  211 (255)
Q Consensus       133 wSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (255)
                      ||+||++++|++ |..||.+..       ...+...+.....+                                     
T Consensus       277 wslG~il~ellt~g~~p~~~~~-------~~~~~~~~~~~~~~-------------------------------------  312 (382)
T 3tt0_A          277 WSFGVLLWEIFTLGGSPYPGVP-------VEELFKLLKEGHRM-------------------------------------  312 (382)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCC-------HHHHHHHHHTTCCC-------------------------------------
T ss_pred             HHHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHHcCCCC-------------------------------------
Confidence            999999999999 999998543       22221111100000                                     


Q ss_pred             HHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          212 LAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       212 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                           ..+..++.++.+|+.+||+.||++|||+++++++
T Consensus       313 -----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          313 -----DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             -----CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 0223456889999999999999999999999874


No 172
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.95  E-value=3.6e-29  Score=205.81  Aligned_cols=188  Identities=16%  Similarity=0.245  Sum_probs=135.2

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|+||++   +.+++.....  +.++++.........   ....+++..+..++.|++.|| |||     
T Consensus        61 ~~E~~~l~~l~h~~i~~---~~~~~~~~~~--~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  135 (281)
T 3cc6_A           61 MSEAVIMKNLDHPHIVK---LIGIIEEEPT--WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV  135 (281)
T ss_dssp             HHHHHHHHHHCCTTBCC---EEEEECSSSC--EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhCCCCCcce---EEEEEcCCCC--EEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            45899999999999999   8877765443  233333333221111   234699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcccc--cccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICR--EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDYM  148 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~--~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~p  148 (255)
                            +||++ +.++.+||+|||++..........  ...+ +.|+|||++.+..++.++||||+||++++|++ |+.|
T Consensus       136 H~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p  214 (281)
T 3cc6_A          136 HRDIAVRNILV-ASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP  214 (281)
T ss_dssp             CCCCSGGGEEE-EETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             cCCCccceEEE-CCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCC
Confidence                  68898 478899999999998776532211  2223 68999999998899999999999999999998 9999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+..      ..+....+... ..+                                          ..+...+..+.+
T Consensus       215 ~~~~~------~~~~~~~~~~~-~~~------------------------------------------~~~~~~~~~l~~  245 (281)
T 3cc6_A          215 FFWLE------NKDVIGVLEKG-DRL------------------------------------------PKPDLCPPVLYT  245 (281)
T ss_dssp             TTTSC------GGGHHHHHHHT-CCC------------------------------------------CCCTTCCHHHHH
T ss_pred             cccCC------hHHHHHHHhcC-CCC------------------------------------------CCCCCCCHHHHH
Confidence            97543      22222222111 000                                          022345678899


Q ss_pred             HHHhccccCCCCCCCHHHHhcC
Q psy323          229 FLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      ++.+||..||++|||+.+++++
T Consensus       246 li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          246 LMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHccCCchhCcCHHHHHHH
Confidence            9999999999999999999864


No 173
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.95  E-value=3e-29  Score=207.80  Aligned_cols=197  Identities=17%  Similarity=0.246  Sum_probs=132.4

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhh------------hhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHH
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKK------------KLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQI   71 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~------------~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~ql   71 (255)
                      +.+|+.+++.+.|+|+++   +.+++...            ...++.++++.........   ....+++..++.++.|+
T Consensus        49 ~~~E~~~l~~l~h~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi  125 (303)
T 1zy4_A           49 ILSEVMLLASLNHQYVVR---YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI  125 (303)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCchHHHH---HHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHH
Confidence            345899999999999998   66544321            1122444455443222211   12357899999999999


Q ss_pred             HHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCC---------------cccccccc-ccccchhhhhc
Q psy323           72 SQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDE---------------TICREDIH-RQYKAVELIYT  123 (255)
Q Consensus        72 l~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~---------------~~~~~~~~-~~y~aPE~l~~  123 (255)
                      +.|| |||           +||++ +.++.+||+|||++......               .......+ +.|+|||++.+
T Consensus       126 ~~~l~~LH~~~i~H~dlkp~Nil~-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  204 (303)
T 1zy4_A          126 LEALSYIHSQGIIHRDLKPMNIFI-DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG  204 (303)
T ss_dssp             HHHHHHHHHTTCCCSCCCGGGEEE-CTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTS
T ss_pred             HHHHHHHHhCCeecccCCHHhEEE-cCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccC
Confidence            9999 998           68888 58889999999999876531               11223345 88999999987


Q ss_pred             C-CCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccC
Q psy323          124 K-EFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSM  202 (255)
Q Consensus       124 ~-~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (255)
                      . .++.++||||+||++++|++   ||....     ........+.......|                           
T Consensus       205 ~~~~~~~~Di~slG~il~~l~~---p~~~~~-----~~~~~~~~~~~~~~~~~---------------------------  249 (303)
T 1zy4_A          205 TGHYNEKIDMYSLGIIFFEMIY---PFSTGM-----ERVNILKKLRSVSIEFP---------------------------  249 (303)
T ss_dssp             CSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHHHHHHHHSTTCCCC---------------------------
T ss_pred             CCCCcchhhHHHHHHHHHHHHh---ccCCch-----hHHHHHHhccccccccC---------------------------
Confidence            6 68999999999999999998   443110     01111111111000000                           


Q ss_pred             CCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          203 NAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                       +            ..+...+..+.+++.+||+.||++|||++++++||||+.
T Consensus       250 -~------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          250 -P------------DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             -T------------TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             -c------------cccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence             0            012345577899999999999999999999999999974


No 174
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.95  E-value=5.4e-29  Score=207.91  Aligned_cols=195  Identities=15%  Similarity=0.226  Sum_probs=135.0

Q ss_pred             CchhHHHhhhhh--hHHHHHHHHHHHHhhhhhhhhhhcCCCCC-CCCcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFV--DAIIARIWIKAVMKKKKLLLKEILPIQPP-HQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h--~~iv~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|  +||++   +.+++...+.. +.+++.... +.......+.+++..+..++.|++.|| |||     
T Consensus        74 ~~E~~~l~~l~~~~~~iv~---~~~~~~~~~~~-~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv  149 (313)
T 3cek_A           74 RNEIAYLNKLQQHSDKIIR---LYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV  149 (313)
T ss_dssp             HHHHHHHHHHGGGCTTBCC---EEEEEECSSEE-EEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhccccCCceEE---EEEEeecCCEE-EEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            358889999975  88888   77766665553 444553221 111122345799999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcc---cccccc-ccccchhhhhc-----------CCCCCchhHHHHHH
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETI---CREDIH-RQYKAVELIYT-----------KEFDMKIDIWSTAC  137 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~---~~~~~~-~~y~aPE~l~~-----------~~~~~~~DiwSlG~  137 (255)
                            +||++.  ++.+||+|||+++.......   .....+ +.|+|||++.+           ..++.++||||+||
T Consensus       150 H~dlkp~NIl~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~  227 (313)
T 3cek_A          150 HSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC  227 (313)
T ss_dssp             CCCCCGGGEEEE--TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHH
T ss_pred             ecCCCcccEEEE--CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHH
Confidence                  788884  47999999999987654221   123345 99999999976           36788999999999


Q ss_pred             HHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcC
Q psy323          138 LTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYK  217 (255)
Q Consensus       138 il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
                      ++++|++|..||.+..      +  ....+........                                       ...
T Consensus       228 il~el~~g~~pf~~~~------~--~~~~~~~~~~~~~---------------------------------------~~~  260 (313)
T 3cek_A          228 ILYYMTYGKTPFQQII------N--QISKLHAIIDPNH---------------------------------------EIE  260 (313)
T ss_dssp             HHHHHHHSSCTTTTCC------S--HHHHHHHHHCTTS---------------------------------------CCC
T ss_pred             HHHHHHhCCCchhhHH------H--HHHHHHHHHhccc---------------------------------------ccC
Confidence            9999999999997432      1  1111211111100                                       000


Q ss_pred             CChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          218 IPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       218 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      .+...+.++.+++.+||+.||++|||++++++||||+.
T Consensus       261 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~  298 (313)
T 3cek_A          261 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  298 (313)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHC
T ss_pred             CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccC
Confidence            12234578899999999999999999999999999863


No 175
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.95  E-value=8.3e-29  Score=204.17  Aligned_cols=191  Identities=17%  Similarity=0.205  Sum_probs=138.0

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      +.+|+.+++.+.|+||++   +.+++.....++++++........-......+++..+..++.|++.|| |||       
T Consensus        70 ~~~E~~~l~~l~h~~i~~---~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~iv  146 (287)
T 4f0f_A           70 FQREVFIMSNLNHPNIVK---LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIV  146 (287)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEETTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCB
T ss_pred             HHHHHHHHHhCCCCCchh---hheeecCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence            345999999999999999   888887777666655543211111111235699999999999999999 998       


Q ss_pred             ------CCceeeCCCCc-----EEEeecCccccCCCCcccccccc-ccccchhhhhc--CCCCCchhHHHHHHHHHHHhh
Q psy323           79 ------EELLYPTQNIE-----IVITDLEYVRPENDETICREDIH-RQYKAVELIYT--KEFDMKIDIWSTACLTFELVT  144 (255)
Q Consensus        79 ------~niLl~~~~~~-----~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~--~~~~~~~DiwSlG~il~~l~~  144 (255)
                            +||++. .++.     +||+|||+++....  ......+ +.|+|||++.+  ..++.++||||+||++|+|++
T Consensus       147 H~dikp~Nil~~-~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~  223 (287)
T 4f0f_A          147 HRDLRSPNIFLQ-SLDENAPVCAKVADFGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT  223 (287)
T ss_dssp             CSCCSGGGEEES-CCCTTCSCCEEECCCTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCcceEEEe-ccCCCCceeEEeCCCCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHc
Confidence                  477774 4444     99999999986554  3444556 99999999953  357889999999999999999


Q ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHH
Q psy323          145 GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAK  224 (255)
Q Consensus       145 g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      |+.||.+....    .......+ ...+..+                                         ..+...+.
T Consensus       224 g~~pf~~~~~~----~~~~~~~~-~~~~~~~-----------------------------------------~~~~~~~~  257 (287)
T 4f0f_A          224 GEGPFDEYSYG----KIKFINMI-REEGLRP-----------------------------------------TIPEDCPP  257 (287)
T ss_dssp             SSCTTTTCCCC----HHHHHHHH-HHSCCCC-----------------------------------------CCCTTSCH
T ss_pred             CCCCCcccccc----HHHHHHHH-hccCCCC-----------------------------------------CCCcccCH
Confidence            99999755411    11111111 1111100                                         12245668


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhc
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ++.+++.+||+.||++|||++++++
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          258 RLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHH
Confidence            8999999999999999999999985


No 176
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.94  E-value=3.5e-28  Score=206.37  Aligned_cols=199  Identities=8%  Similarity=0.052  Sum_probs=138.5

Q ss_pred             CCCchhHHHhhhhhhHHHHHHHHHHHHhhh---------------hhhhhhhcCCCCCCCCccc--c--cCCCCHHHHHH
Q psy323            6 PVNPDVKVMENMFVDAIIARIWIKAVMKKK---------------KLLLKEILPIQPPHQHKNL--T--RSSFSLTTFSK   66 (255)
Q Consensus         6 ~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~---------------~~~~~~~~~~~~~l~~~~~--~--~~~l~~~~~~~   66 (255)
                      .+.+|+++++.+.|+||++   ++..+...               +..++.++++. .......  .  ...+++..+..
T Consensus        88 ~~~~E~~~l~~l~h~niv~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~  163 (352)
T 2jii_A           88 RLFNEQNFFQRAAKPLQVN---KWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQ  163 (352)
T ss_dssp             THHHHHHHHHHHCCHHHHH---HHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHH
T ss_pred             hHHHHHHHHHHhcccchhh---hhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHH
Confidence            3456999999999999999   77766542               12223444444 2111111  1  25799999999


Q ss_pred             HHHHHHHhh-ccC-----------CCceeeCCCC--cEEEeecCccccCCCCcc--------cccccc-ccccchhhhhc
Q psy323           67 YVKQISQFV-YMN-----------EELLYPTQNI--EIVITDLEYVRPENDETI--------CREDIH-RQYKAVELIYT  123 (255)
Q Consensus        67 ~~~qll~~l-ylH-----------~niLl~~~~~--~~kl~DfG~a~~~~~~~~--------~~~~~~-~~y~aPE~l~~  123 (255)
                      ++.|++.|| |||           +|||+. .++  .+||+|||+++.......        .....+ +.|+|||++.+
T Consensus       164 i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~-~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  242 (352)
T 2jii_A          164 VACRLLDALEFLHENEYVHGNVTAENIFVD-PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG  242 (352)
T ss_dssp             HHHHHHHHHHHHHHTTCBCSCCCGGGEEEE-TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHhCCccCCCCCHHHEEEc-CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc
Confidence            999999999 998           789994 666  899999999987654211        122345 89999999999


Q ss_pred             CCCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHH-HhcCCChhhhhhhhhhccccccccccccccccC
Q psy323          124 KEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQ-LMAEIPPNLMDNERCIRNIKVLLERDQHNITSM  202 (255)
Q Consensus       124 ~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (255)
                      ..++.++||||+||++|+|++|+.||.+...     ....+..... ....++. .             ..        .
T Consensus       243 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~-~-------------~~--------~  295 (352)
T 2jii_A          243 CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP-----NTEDIMKQKQKFVDKPGP-F-------------VG--------P  295 (352)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT-----CHHHHHHHHHHHHHSCCC-E-------------EC--------T
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCcccCCc-----CHHHHHHHHHhccCChhh-h-------------hh--------h
Confidence            8999999999999999999999999985431     1222222221 1111110 0             00        0


Q ss_pred             CCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          203 NAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ..             .....+.++.+++.+||+.||++|||++++++
T Consensus       296 ~~-------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          296 CG-------------HWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             TS-------------CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             cc-------------ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            00             00134688999999999999999999999875


No 177
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.94  E-value=7.2e-29  Score=202.80  Aligned_cols=190  Identities=19%  Similarity=0.281  Sum_probs=133.3

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC-CcccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ-HKNLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      .+|+++++.+.|+||++   +.+++...+.. +.++++..... ......+.+++..++.++.|++.|| |||       
T Consensus        54 ~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i  129 (271)
T 3dtc_A           54 RQEAKLFAMLKHPNIIA---LRGVCLKEPNL-CLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPI  129 (271)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECCC--C-EEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCC
T ss_pred             HHHHHHHHhcCCCCEee---EEEEEecCCce-EEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence            35899999999999999   88887776653 44444443322 2223356799999999999999999 997       


Q ss_pred             -------CCceeeC-------CCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHh
Q psy323           79 -------EELLYPT-------QNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELV  143 (255)
Q Consensus        79 -------~niLl~~-------~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~  143 (255)
                             +||++..       .++.+||+|||+++....... ....+ +.|+|||++.+..++.++||||+|+++++|+
T Consensus       130 ~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~  208 (271)
T 3dtc_A          130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELL  208 (271)
T ss_dssp             CCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHH
T ss_pred             eecCCchHHEEEecccccccccCcceEEccCCcccccccccc-cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence                   5788853       267899999999987655322 23345 9999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhH
Q psy323          144 TGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDA  223 (255)
Q Consensus       144 ~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (255)
                      +|+.||.+.+      .......+..  +...                                        ...+...+
T Consensus       209 ~g~~p~~~~~------~~~~~~~~~~--~~~~----------------------------------------~~~~~~~~  240 (271)
T 3dtc_A          209 TGEVPFRGID------GLAVAYGVAM--NKLA----------------------------------------LPIPSTCP  240 (271)
T ss_dssp             HCCCTTTTSC------HHHHHHHHHT--SCCC----------------------------------------CCCCTTCC
T ss_pred             hCCCCCCCCC------HHHHHHhhhc--CCCC----------------------------------------CCCCcccC
Confidence            9999998543      1111111100  0000                                        01224556


Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          224 KQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       224 ~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      ..+.+++.+||+.||++|||+.+++++
T Consensus       241 ~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          241 EPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            889999999999999999999999874


No 178
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.94  E-value=4.6e-29  Score=208.06  Aligned_cols=189  Identities=16%  Similarity=0.287  Sum_probs=138.2

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--------------------------ccCCCCH
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--------------------------TRSSFSL   61 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--------------------------~~~~l~~   61 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.........                          ....+++
T Consensus        74 ~~E~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (314)
T 2ivs_A           74 LSEFNVLKQVNHPHVIK---LYGACSQDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM  149 (314)
T ss_dssp             HHHHHHHTTCCCTTBCC---EEEEECSSSSC-EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECH
T ss_pred             HHHHHHHhhCCCCceee---EEEEEecCCce-EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCH
Confidence            35999999999999999   88887766553 444444432211111                          1134899


Q ss_pred             HHHHHHHHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccc---ccccc-ccccchhhhhcCC
Q psy323           62 TTFSKYVKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETIC---REDIH-RQYKAVELIYTKE  125 (255)
Q Consensus        62 ~~~~~~~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~-~~y~aPE~l~~~~  125 (255)
                      ..++.++.|++.|| |||           +||++ +.++.+||+|||+++........   ....+ +.|+|||.+.+..
T Consensus       150 ~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  228 (314)
T 2ivs_A          150 GDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI  228 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE-ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcccccchheEEE-cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCC
Confidence            99999999999999 998           78999 47889999999999876543222   12223 7799999999988


Q ss_pred             CCCchhHHHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCC
Q psy323          126 FDMKIDIWSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNA  204 (255)
Q Consensus       126 ~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (255)
                      ++.++||||+||++++|++ |..||.+..      .......+.. ...+                              
T Consensus       229 ~~~~~Di~slG~il~el~t~g~~p~~~~~------~~~~~~~~~~-~~~~------------------------------  271 (314)
T 2ivs_A          229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIP------PERLFNLLKT-GHRM------------------------------  271 (314)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCSSTTCC------GGGHHHHHHT-TCCC------------------------------
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHhhc-CCcC------------------------------
Confidence            9999999999999999999 999998654      1111111110 0000                              


Q ss_pred             CccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          205 KDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                                  ..+...+.++.+++.+||+.||++|||+.+++++
T Consensus       272 ------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          272 ------------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                        1223456889999999999999999999999864


No 179
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.94  E-value=1.8e-29  Score=215.63  Aligned_cols=191  Identities=14%  Similarity=0.135  Sum_probs=139.1

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc---------cccCCCCHHHHHHHHHHHHHhh-cc
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN---------LTRSSFSLTTFSKYVKQISQFV-YM   77 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~---------~~~~~l~~~~~~~~~~qll~~l-yl   77 (255)
                      .+|+.+++.+.|+||++   +++++...+.. +.++++........         .....+++.++..++.|++.|| ||
T Consensus       122 ~~E~~~l~~l~hpnIv~---~~~~~~~~~~~-~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  197 (367)
T 3l9p_A          122 LMEALIISKFNHQNIVR---CIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL  197 (367)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECSSSSC-EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCe---EEEEEecCCCC-EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHH
Confidence            45899999999999999   88888766553 44444443321111         1124599999999999999999 99


Q ss_pred             C-----------CCceeeCCC---CcEEEeecCccccCCCCc---ccccccc-ccccchhhhhcCCCCCchhHHHHHHHH
Q psy323           78 N-----------EELLYPTQN---IEIVITDLEYVRPENDET---ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLT  139 (255)
Q Consensus        78 H-----------~niLl~~~~---~~~kl~DfG~a~~~~~~~---~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il  139 (255)
                      |           +|||+. .+   ..+||+|||+|+......   ......+ +.|+|||++.+..++.++||||+||++
T Consensus       198 H~~~ivHrDlkp~NIll~-~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il  276 (367)
T 3l9p_A          198 EENHFIHRDIAARNCLLT-CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL  276 (367)
T ss_dssp             HHTTCCCSCCCGGGEEES-CSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HhCCeeCCCCChhhEEEe-cCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHH
Confidence            8           799994 33   359999999997653211   1122334 789999999999999999999999999


Q ss_pred             HHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCC
Q psy323          140 FELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKI  218 (255)
Q Consensus       140 ~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (255)
                      ++|++ |..||.+..      ..+....+... ..+                                          ..
T Consensus       277 ~ellt~g~~pf~~~~------~~~~~~~i~~~-~~~------------------------------------------~~  307 (367)
T 3l9p_A          277 WEIFSLGYMPYPSKS------NQEVLEFVTSG-GRM------------------------------------------DP  307 (367)
T ss_dssp             HHHHTTSCCSSTTCC------HHHHHHHHHTT-CCC------------------------------------------CC
T ss_pred             HHHHhCCCCCCCCCC------HHHHHHHHHcC-CCC------------------------------------------CC
Confidence            99998 999998543      22222222111 000                                          02


Q ss_pred             ChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcC
Q psy323          219 PKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEW  252 (255)
Q Consensus       219 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  252 (255)
                      +..++..+.+|+.+||+.||++|||+.+++++.+
T Consensus       308 ~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~  341 (367)
T 3l9p_A          308 PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE  341 (367)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            2345678899999999999999999999998754


No 180
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.94  E-value=1.5e-28  Score=215.58  Aligned_cols=188  Identities=19%  Similarity=0.282  Sum_probs=139.8

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc----cCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT----RSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +.+|+.+|+.+.|+||++   +.+++....  ++.++++..........    ...+++..+..++.|++.|| |||   
T Consensus       230 ~~~E~~~l~~l~h~~iv~---l~~~~~~~~--~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  304 (454)
T 1qcf_A          230 FLAEANVMKTLQHDKLVK---LHAVVTKEP--IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN  304 (454)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEECSSS--CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhhCCCCCEee---EEEEEeCCc--cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            346999999999999999   877765332  24555555443322222    23689999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCccc--ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETIC--REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GD  146 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~~--~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~  146 (255)
                              +|||+ +.++.+||+|||+++........  ....+ +.|+|||++.+..++.++||||+||++|+|++ |+
T Consensus       305 ivHrDlkp~Nill-~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~  383 (454)
T 1qcf_A          305 YIHRDLRAANILV-SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR  383 (454)
T ss_dssp             CCCSSCSGGGEEE-CTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ccCCCCCHHHEEE-CCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCC
Confidence                    78999 57889999999999877552111  11222 67999999998899999999999999999999 99


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+..      ..+....+......                                           ..+..++.++
T Consensus       384 ~P~~~~~------~~~~~~~i~~~~~~-------------------------------------------~~~~~~~~~l  414 (454)
T 1qcf_A          384 IPYPGMS------NPEVIRALERGYRM-------------------------------------------PRPENCPEEL  414 (454)
T ss_dssp             CSSTTCC------HHHHHHHHHHTCCC-------------------------------------------CCCTTSCHHH
T ss_pred             CCCCCCC------HHHHHHHHHcCCCC-------------------------------------------CCCCCCCHHH
Confidence            9998654      22332222221111                                           0223456889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhc
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .++|.+||..||++|||++++++
T Consensus       415 ~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          415 YNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHHH
Confidence            99999999999999999998875


No 181
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.94  E-value=1e-28  Score=206.00  Aligned_cols=191  Identities=18%  Similarity=0.229  Sum_probs=139.2

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.........   ....+++.++..++.|++.|| |||    
T Consensus        54 ~~~E~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  129 (310)
T 3s95_A           54 FLKEVKVMRCLEHPNVLK---FIGVLYKDKRL-NFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI  129 (310)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEEETTEE-EEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHhCCCcCccc---EEEEEecCCee-EEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            346999999999999999   88888776553 444454443222211   135799999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCccc---------------ccccc-ccccchhhhhcCCCCCchhHHHH
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETIC---------------REDIH-RQYKAVELIYTKEFDMKIDIWST  135 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---------------~~~~~-~~y~aPE~l~~~~~~~~~DiwSl  135 (255)
                             +||++ +.++.+||+|||+++........               ...++ +.|+|||++.+..++.++||||+
T Consensus       130 vH~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  208 (310)
T 3s95_A          130 IHRDLNSHNCLV-RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF  208 (310)
T ss_dssp             ECSCCSTTSEEE-CTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred             cCCCCCcCeEEE-CCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHH
Confidence                   79999 58889999999999876542111               13345 88999999999999999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHh
Q psy323          136 ACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKS  215 (255)
Q Consensus       136 G~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (255)
                      ||++++|++|..|+............                                             .......  
T Consensus       209 G~~l~el~~g~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~--  241 (310)
T 3s95_A          209 GIVLCEIIGRVNADPDYLPRTMDFGL---------------------------------------------NVRGFLD--  241 (310)
T ss_dssp             HHHHHHHHHTCCSSTTTSCBCTTSSB---------------------------------------------CHHHHHH--
T ss_pred             HHHHHHHhcCCCCCcchhhhHHHHhh---------------------------------------------hhhcccc--
Confidence            99999999999998754322110000                                             0000000  


Q ss_pred             cCCChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          216 YKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       216 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ...+..++..+.+++.+||+.||++|||+.++++
T Consensus       242 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          242 RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            0123455678899999999999999999999875


No 182
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94  E-value=1.2e-28  Score=208.28  Aligned_cols=190  Identities=14%  Similarity=0.196  Sum_probs=138.0

Q ss_pred             CchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc-------------------------cCCCCH
Q psy323            8 NPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT-------------------------RSSFSL   61 (255)
Q Consensus         8 ~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------~~~l~~   61 (255)
                      .+|+.+++.+ .|+||++   +.+++...+.. +.++++..........                         ...+++
T Consensus        96 ~~E~~~l~~l~~hp~iv~---~~~~~~~~~~~-~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  171 (344)
T 1rjb_A           96 MSELKMMTQLGSHENIVN---LLGACTLSGPI-YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF  171 (344)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEECSSSSC-EEEEECCTTCBHHHHHHTTTTCC---------------------CCH
T ss_pred             HHHHHHHHhhcCCCCeee---EEEEEeeCCcc-EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCH
Confidence            4589999999 9999999   88887776553 4444444332111111                         134899


Q ss_pred             HHHHHHHHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccc---ccccc-ccccchhhhhcCC
Q psy323           62 TTFSKYVKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETIC---REDIH-RQYKAVELIYTKE  125 (255)
Q Consensus        62 ~~~~~~~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~-~~y~aPE~l~~~~  125 (255)
                      ..+..++.|++.|| |||           +||++ +.++.+||+|||++.........   ....+ +.|+|||++.+..
T Consensus       172 ~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll-~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  250 (344)
T 1rjb_A          172 EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV-THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI  250 (344)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE-ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE-cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCC
Confidence            99999999999999 998           78999 58889999999999876542221   11222 6799999999999


Q ss_pred             CCCchhHHHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCC
Q psy323          126 FDMKIDIWSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNA  204 (255)
Q Consensus       126 ~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (255)
                      ++.++||||+||++++|++ |..||.+..      .......+......+                              
T Consensus       251 ~~~~~Di~slG~il~el~t~g~~p~~~~~------~~~~~~~~~~~~~~~------------------------------  294 (344)
T 1rjb_A          251 YTIKSDVWSYGILLWEIFSLGVNPYPGIP------VDANFYKLIQNGFKM------------------------------  294 (344)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCC------CSHHHHHHHHTTCCC------------------------------
T ss_pred             CChhHhHHHHHHHHHHHHcCCCCCcccCC------cHHHHHHHHhcCCCC------------------------------
Confidence            9999999999999999998 999998654      112222221110000                              


Q ss_pred             CccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          205 KDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                                  ..+...+.++.+++.+||+.||.+|||+.++++|
T Consensus       295 ------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          295 ------------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                        0223456889999999999999999999999876


No 183
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.94  E-value=8.6e-29  Score=216.82  Aligned_cols=188  Identities=14%  Similarity=0.207  Sum_probs=137.6

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc----ccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL----TRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +.+|+.+|+.+.|+||++   +++++......++.++++.........    ....+++..+..++.|++.|| |||   
T Consensus       233 ~~~E~~~l~~l~h~niv~---~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  309 (450)
T 1k9a_A          233 FLAEASVMTQLRHSNLVQ---LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN  309 (450)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhccCCCEEE---EEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            346999999999999999   888765544322445555443222111    123479999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCCC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDYM  148 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~p  148 (255)
                              +|||+ +.++.+||+|||+++.....  .....+ +.|+|||++.+..++.++||||+||++|+|++ |+.|
T Consensus       310 ivHrDlkp~Nill-~~~~~~kl~DfG~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P  386 (450)
T 1k9a_A          310 FVHRDLAARNVLV-SEDNVAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP  386 (450)
T ss_dssp             EECSCCCGGGEEE-CTTSCEEECCCTTCEECC--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             eeCCCCCHhhEEE-CCCCCEEEeeCCCccccccc--ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence                    78999 57889999999999865442  222234 78999999999999999999999999999998 9999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+...      .+....+.....                                           ...+..++.++.+
T Consensus       387 ~~~~~~------~~~~~~i~~~~~-------------------------------------------~~~p~~~~~~l~~  417 (450)
T 1k9a_A          387 YPRIPL------KDVVPRVEKGYK-------------------------------------------MDAPDGCPPAVYD  417 (450)
T ss_dssp             STTSCT------TTHHHHHHTTCC-------------------------------------------CCCCTTCCHHHHH
T ss_pred             CCCCCH------HHHHHHHHcCCC-------------------------------------------CCCCCcCCHHHHH
Confidence            986542      122222211000                                           0133456789999


Q ss_pred             HHHhccccCCCCCCCHHHHhc
Q psy323          229 FLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~  249 (255)
                      +|.+||+.||++|||+.++++
T Consensus       418 li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          418 VMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999998874


No 184
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.94  E-value=4.8e-29  Score=225.50  Aligned_cols=217  Identities=18%  Similarity=0.235  Sum_probs=142.4

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhh-----hhhhhhhcCCCCCCCCccc-----ccCCCCHHHHHHHHHHHHHhh-c
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKK-----KLLLKEILPIQPPHQHKNL-----TRSSFSLTTFSKYVKQISQFV-Y   76 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~-----~~~~~~~~~~~~~l~~~~~-----~~~~l~~~~~~~~~~qll~~l-y   76 (255)
                      .+|+.+++.+.|+||++   +.+++...     +...+.++++..+......     ....+++..++.++.|++.|| |
T Consensus        60 ~~Ei~iL~~L~HpnIV~---l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~y  136 (676)
T 3qa8_A           60 CLEIQIMKKLNHPNVVS---AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY  136 (676)
T ss_dssp             HHHHHHHHHCCBTTBCC---EEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCc---eeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence            35899999999999998   77766541     1222444444433222111     123699999999999999999 9


Q ss_pred             cC-----------CCceeeCCC--CcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHH
Q psy323           77 MN-----------EELLYPTQN--IEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFEL  142 (255)
Q Consensus        77 lH-----------~niLl~~~~--~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l  142 (255)
                      ||           +||++...+  ..+||+|||++.............+ +.|+|||++.+..++.++||||+||++|+|
T Consensus       137 LHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeL  216 (676)
T 3qa8_A          137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC  216 (676)
T ss_dssp             HHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHH
T ss_pred             HHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHH
Confidence            98           799995332  2489999999998776544555566 999999999988999999999999999999


Q ss_pred             hhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccc-cccccCCCCccHHHHHHHhcCCChh
Q psy323          143 VTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQ-HNITSMNAKDNFYRILAKSYKIPKE  221 (255)
Q Consensus       143 ~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
                      ++|..||.+..      ..      ....+............      +-...+ .......+         ........
T Consensus       217 ltG~~Pf~~~~------~~------~~~~~~i~~~~~~~~~~------~~~l~g~~~~~~~lp---------~p~~l~~~  269 (676)
T 3qa8_A          217 ITGFRPFLPNW------QP------VQWHGKVREKSNEHIVV------YDDLTGAVKFSSVLP---------TPNHLSGI  269 (676)
T ss_dssp             HSSCSSCCSSC------HH------HHSSTTCC------CCS------CCCCSSSCCCCSSSC---------CSCCCCGG
T ss_pred             HHCCCCCCccc------ch------hhhhhhhhcccchhhhh------hhhhccccccccccC---------Cchhhchh
Confidence            99999997532      10      01111000000000000      000000 00000000         00113356


Q ss_pred             hHHHHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          222 DAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       222 ~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                      .+..+.+|+.+||.+||++|||++++++||||+
T Consensus       270 ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~  302 (676)
T 3qa8_A          270 LAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ  302 (676)
T ss_dssp             GHHHHHHHHHHHSCSSCC---CCTTCCCCTTHH
T ss_pred             hhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHH
Confidence            789999999999999999999999999999985


No 185
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.94  E-value=1.3e-29  Score=213.95  Aligned_cols=198  Identities=17%  Similarity=0.241  Sum_probs=118.4

Q ss_pred             HHHhhhhhhHHHHHHHHHHHHhhh---hhhhhhhcCCCCCCCCccc----ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323           12 KVMENMFVDAIIARIWIKAVMKKK---KLLLKEILPIQPPHQHKNL----TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus        12 ~~l~~~~h~~iv~~~~l~~~~~~~---~~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      ..++.+.|+|+++   +.+++...   +..++.++++.........    ....+++.+++.++.|++.|| |||     
T Consensus        74 ~~~~~~~h~~i~~---~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~iv  150 (336)
T 3fhr_A           74 HHWQASGGPHIVC---ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIA  150 (336)
T ss_dssp             HHHHHTTSTTBCC---EEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHhcCCCChHH---HHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            4456678899998   77777652   1112444455443221111    123699999999999999999 998     


Q ss_pred             ------CCceeeCC--CCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 ------EELLYPTQ--NIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 ------~niLl~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                            +||++...  ++.+||+|||+++..... ......+ +.|+|||++.+..++.++||||+||++++|++|..||
T Consensus       151 H~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  229 (336)
T 3fhr_A          151 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF  229 (336)
T ss_dssp             CSCCSGGGEEESCSSTTCCEEECCCTTCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cCCCCHHHEEEEecCCCceEEEeccccceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence                  78999532  456999999999876542 2233445 8999999998888899999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+.......  ......+......                         ..  .+             .....+.++.+|
T Consensus       230 ~~~~~~~~~--~~~~~~~~~~~~~-------------------------~~--~~-------------~~~~~~~~~~~l  267 (336)
T 3fhr_A          230 YSNTGQAIS--PGMKRRIRLGQYG-------------------------FP--NP-------------EWSEVSEDAKQL  267 (336)
T ss_dssp             -----------------------C-------------------------CC--TT-------------TSTTCCHHHHHH
T ss_pred             CCccchhhh--hhHHHhhhccccc-------------------------cC--ch-------------hhccCCHHHHHH
Confidence            754321100  0000000000000                         00  00             112456889999


Q ss_pred             HHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          230 LIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+||+.||++|||++++++||||++
T Consensus       268 i~~~L~~dP~~Rpt~~ell~hp~~~~  293 (336)
T 3fhr_A          268 IRLLLKTDPTERLTITQFMNHPWINQ  293 (336)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             HHHHCCCChhHCcCHHHHhcCccccc
Confidence            99999999999999999999999964


No 186
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.94  E-value=1.8e-28  Score=204.32  Aligned_cols=191  Identities=16%  Similarity=0.213  Sum_probs=139.2

Q ss_pred             CCchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--------------------ccCCCCHHHHH
Q psy323            7 VNPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--------------------TRSSFSLTTFS   65 (255)
Q Consensus         7 ~~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--------------------~~~~l~~~~~~   65 (255)
                      +.+|+.+++.+ .|+||++   +.+++...+.. +.++++.........                    ....+++..++
T Consensus        73 ~~~E~~~l~~l~~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (313)
T 1t46_A           73 LMSELKVLSYLGNHMNIVN---LLGACTIGGPT-LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL  148 (313)
T ss_dssp             HHHHHHHHHHHCCCTTBCC---EEEEECSSSSC-EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHH
T ss_pred             HHHHHHHHhhcccCCCeee---EEEEEecCCCc-EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHH
Confidence            34689999999 9999999   88887766553 344444333111111                    11259999999


Q ss_pred             HHHHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccc---ccccc-ccccchhhhhcCCCCCc
Q psy323           66 KYVKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETIC---REDIH-RQYKAVELIYTKEFDMK  129 (255)
Q Consensus        66 ~~~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~-~~y~aPE~l~~~~~~~~  129 (255)
                      .++.|++.|| |||           +||++ +.++.+||+|||+++........   ....+ +.|+|||++.+..++.+
T Consensus       149 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  227 (313)
T 1t46_A          149 SFSYQVAKGMAFLASKNCIHRDLAARNILL-THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE  227 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCccceEEE-cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChH
Confidence            9999999999 998           68999 47889999999999877653221   11223 68999999999999999


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccH
Q psy323          130 IDIWSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNF  208 (255)
Q Consensus       130 ~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (255)
                      +||||+||++++|++ |..||.+..      ..............+                                  
T Consensus       228 ~Di~slG~il~ellt~g~~p~~~~~------~~~~~~~~~~~~~~~----------------------------------  267 (313)
T 1t46_A          228 SDVWSYGIFLWELFSLGSSPYPGMP------VDSKFYKMIKEGFRM----------------------------------  267 (313)
T ss_dssp             HHHHHHHHHHHHHHTTTCCSSTTCC------SSHHHHHHHHHTCCC----------------------------------
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCccc------chhHHHHHhccCCCC----------------------------------
Confidence            999999999999998 999998654      122222221111000                                  


Q ss_pred             HHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          209 YRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                              ..+...+.++.+++.+||+.||.+|||+++++++
T Consensus       268 --------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          268 --------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             --------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                    0123456788999999999999999999999864


No 187
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.94  E-value=6.2e-29  Score=214.32  Aligned_cols=217  Identities=13%  Similarity=0.200  Sum_probs=147.1

Q ss_pred             chhHHHhhhhhhHHHHHHHHHHHHhhhhh-hhhhhcCCCCCCC-----CcccccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            9 PDVKVMENMFVDAIIARIWIKAVMKKKKL-LLKEILPIQPPHQ-----HKNLTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-~~~~~~~~~~~l~-----~~~~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +|+++++.+.|+||++   +.+++...+. .++.++++.....     ........+++..++.++.|++.|| |||   
T Consensus        56 ~E~~~l~~l~hpnIv~---~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  132 (396)
T 4eut_A           56 REFEVLKKLNHKNIVK---LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG  132 (396)
T ss_dssp             HHHHHHHHCCCTTBCC---EEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCCCCe---EEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5899999999999999   8877765542 2244555544321     1111223499999999999999999 998   


Q ss_pred             --------CCceee---CCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhc--------CCCCCchhHHHHHHH
Q psy323           79 --------EELLYP---TQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYT--------KEFDMKIDIWSTACL  138 (255)
Q Consensus        79 --------~niLl~---~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~--------~~~~~~~DiwSlG~i  138 (255)
                              +|||+.   +.++.+||+|||+++...........++ +.|+|||++.+        ..++.++||||+||+
T Consensus       133 ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~i  212 (396)
T 4eut_A          133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT  212 (396)
T ss_dssp             EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHH
T ss_pred             EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHH
Confidence                    788872   3456799999999998776555555667 99999999976        456789999999999


Q ss_pred             HHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCC
Q psy323          139 TFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKI  218 (255)
Q Consensus       139 l~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (255)
                      +|+|++|+.||.+..+..  ...+   .+....+..|...+.......  ...+...    ...+          .....
T Consensus       213 l~el~tg~~Pf~~~~~~~--~~~~---~~~~~~~~~p~~~~~~~~~~~--~~~~~~~----~~~~----------~~~~l  271 (396)
T 4eut_A          213 FYHAATGSLPFRPFEGPR--RNKE---VMYKIITGKPSGAISGVQKAE--NGPIDWS----GDMP----------VSCSL  271 (396)
T ss_dssp             HHHHHHSSCSEECTTCTT--TCHH---HHHHHHHSCCTTCCEEEECST--TCCEEEE----SSCC----------TTCSS
T ss_pred             HHHHHHCCCCCCCCCccc--chHH---HHHHHhcCCCcccchhheecc--CCCcccC----ccCC----------ccccc
Confidence            999999999998654321  1222   233344333332221111110  0000000    0000          01123


Q ss_pred             ChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          219 PKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       219 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ....+..+.+++.+||++||++|+|++++++
T Consensus       272 ~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          272 SRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             CHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             chHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence            4567889999999999999999999999865


No 188
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.94  E-value=2.7e-28  Score=201.63  Aligned_cols=198  Identities=13%  Similarity=0.112  Sum_probs=137.8

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+++++.+.|++++.   ....+...+...+.++++.........  ....+++..+..++.|++.|| |||     
T Consensus        51 ~~~e~~~l~~l~~~~~i~---~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv  127 (296)
T 4hgt_A           51 LHIESKIYKMMQGGVGIP---TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI  127 (296)
T ss_dssp             HHHHHHHHHHHTTSTTCC---CEEEEEEETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHhcCCCCCC---eeeeecCCCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            455899999999888776   444443333323444444422111111  245799999999999999999 998     


Q ss_pred             ------CCceee--CCCCcEEEeecCccccCCCCcc--------cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHH
Q psy323           79 ------EELLYP--TQNIEIVITDLEYVRPENDETI--------CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFE  141 (255)
Q Consensus        79 ------~niLl~--~~~~~~kl~DfG~a~~~~~~~~--------~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~  141 (255)
                            +|||+.  +.++.+||+|||+++.......        .....+ +.|+|||++.+..++.++||||+||++++
T Consensus       128 H~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~  207 (296)
T 4hgt_A          128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY  207 (296)
T ss_dssp             CSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHH
Confidence                  789883  3578899999999987654321        123345 89999999999999999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChh
Q psy323          142 LVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKE  221 (255)
Q Consensus       142 l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
                      |++|+.||.+......   ...+..+.......+...                                       ....
T Consensus       208 l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~---------------------------------------~~~~  245 (296)
T 4hgt_A          208 FNLGSLPWQGLKAATK---RQKYERISEKKMSTPIEV---------------------------------------LCKG  245 (296)
T ss_dssp             HHHSSCTTSSCCCSSS---SSHHHHHHHHHHHSCHHH---------------------------------------HTTT
T ss_pred             HhcCCCCCcccchhhh---hhhhhhhhcccccchhhh---------------------------------------hhcc
Confidence            9999999986543321   122222211111111000                                       0123


Q ss_pred             hHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          222 DAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       222 ~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .+.++.+++.+||+.||++|||++++++
T Consensus       246 ~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          246 YPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             SCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             CCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            4678999999999999999999999875


No 189
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94  E-value=8.3e-29  Score=204.31  Aligned_cols=189  Identities=14%  Similarity=0.210  Sum_probs=138.8

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+++++.+.|+||++   +.+++.....  +.++++.........   ....+++..+..++.|++.|| |||     
T Consensus        58 ~~E~~~l~~l~h~~i~~---~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  132 (287)
T 1u59_A           58 MREAQIMHQLDNPYIVR---LIGVCQAEAL--MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV  132 (287)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEEESSSE--EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhCCCCCEeE---EEEEecCCCc--EEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            45899999999999999   8877743332  344444433221111   235699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCccc----ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETIC----REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GD  146 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~  146 (255)
                            +||++ +.++.+||+|||+++........    ....+ +.|+|||++.+..++.++||||+||++++|++ |+
T Consensus       133 H~dlkp~Nili-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  211 (287)
T 1u59_A          133 HRDLAARNVLL-VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ  211 (287)
T ss_dssp             CCCCSGGGEEE-EETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             eCCCchheEEE-cCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence                  78898 47889999999999877543221    11223 77999999998889999999999999999998 99


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+..      ..+....+..  +..                                         ...+...+.++
T Consensus       212 ~p~~~~~------~~~~~~~i~~--~~~-----------------------------------------~~~~~~~~~~l  242 (287)
T 1u59_A          212 KPYKKMK------GPEVMAFIEQ--GKR-----------------------------------------MECPPECPPEL  242 (287)
T ss_dssp             CTTTTCC------THHHHHHHHT--TCC-----------------------------------------CCCCTTCCHHH
T ss_pred             CCcccCC------HHHHHHHHhc--CCc-----------------------------------------CCCCCCcCHHH
Confidence            9997543      2222222111  000                                         01224566889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCc
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQNE  251 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~hp  251 (255)
                      .+++.+||+.||++|||+.+++++.
T Consensus       243 ~~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          243 YALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHH
Confidence            9999999999999999999999863


No 190
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.94  E-value=1.8e-28  Score=222.19  Aligned_cols=188  Identities=14%  Similarity=0.206  Sum_probs=137.8

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+++|+.+.|+||++   +++++....  ++.++++.........   ....+++..+..++.|++.|| |||    
T Consensus       383 ~~~E~~il~~l~hpniv~---l~~~~~~~~--~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  457 (613)
T 2ozo_A          383 MMREAQIMHQLDNPYIVR---LIGVCQAEA--LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF  457 (613)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEESSS--EEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCCCEee---EEEEeccCC--eEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            345999999999999999   888876543  2444555444322211   245699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCccc-cc---ccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-C
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETIC-RE---DIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-G  145 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~-~~---~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g  145 (255)
                             +|||+ +.++.+||+|||+++........ +.   ..+ +.|+|||++.+..++.++||||+||++|+|++ |
T Consensus       458 iHrDlkp~NILl-~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G  536 (613)
T 2ozo_A          458 VHRNLAARNVLL-VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG  536 (613)
T ss_dssp             CCSCCSGGGEEE-EETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             EcCcCCHHHEEE-cCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence                   78999 47889999999999877542211 11   122 67999999999999999999999999999998 9


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      +.||.+.+      ..+....+.....                                           ...+..++.+
T Consensus       537 ~~Pf~~~~------~~~~~~~i~~~~~-------------------------------------------~~~p~~~~~~  567 (613)
T 2ozo_A          537 QKPYKKMK------GPEVMAFIEQGKR-------------------------------------------MECPPECPPE  567 (613)
T ss_dssp             CCTTTTCC------SHHHHHHHHTTCC-------------------------------------------CCCCTTCCHH
T ss_pred             CCCCCCCC------HHHHHHHHHcCCC-------------------------------------------CCCCCcCCHH
Confidence            99998654      2222222211000                                           0123456789


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhc
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      +.++|.+||+.||++|||++++++
T Consensus       568 l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          568 LYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999998864


No 191
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.94  E-value=1.3e-28  Score=207.97  Aligned_cols=190  Identities=14%  Similarity=0.184  Sum_probs=138.5

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--------------------------ccCCCC
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--------------------------TRSSFS   60 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--------------------------~~~~l~   60 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.........                          ....++
T Consensus        97 ~~~E~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  172 (343)
T 1luf_A           97 FQREAALMAEFDNPNIVK---LLGVCAVGKPM-CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS  172 (343)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEECSSSSC-EEEEECCTTCBHHHHHHHTCC----------------------CCCC
T ss_pred             HHHHHHHHHhCCCCCEEE---EEEEEccCCce-EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCC
Confidence            346999999999999999   88887766553 344444333211111                          125799


Q ss_pred             HHHHHHHHHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCcc---cccccc-ccccchhhhhcC
Q psy323           61 LTTFSKYVKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETI---CREDIH-RQYKAVELIYTK  124 (255)
Q Consensus        61 ~~~~~~~~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~---~~~~~~-~~y~aPE~l~~~  124 (255)
                      +.+++.++.|++.|| |||           +||++ +.++.+||+|||+++.......   .....+ +.|+|||++.+.
T Consensus       173 ~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  251 (343)
T 1luf_A          173 CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV-GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN  251 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE-CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccC
Confidence            999999999999999 998           78999 5788999999999987654221   122233 789999999999


Q ss_pred             CCCCchhHHHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCC
Q psy323          125 EFDMKIDIWSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMN  203 (255)
Q Consensus       125 ~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (255)
                      .++.++||||+||++|+|++ |..||.+..      ..+....+..  +..                             
T Consensus       252 ~~~~~~Di~slG~il~el~t~g~~p~~~~~------~~~~~~~~~~--~~~-----------------------------  294 (343)
T 1luf_A          252 RYTTESDVWAYGVVLWEIFSYGLQPYYGMA------HEEVIYYVRD--GNI-----------------------------  294 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHT--TCC-----------------------------
T ss_pred             CcCcccccHHHHHHHHHHHhcCCCcCCCCC------hHHHHHHHhC--CCc-----------------------------
Confidence            99999999999999999999 999997543      2222221111  000                             


Q ss_pred             CCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          204 AKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                                  ...+...+.++.+++.+||+.||++|||+.+++++
T Consensus       295 ------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          295 ------------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             ------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence                        00223456789999999999999999999998763


No 192
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.94  E-value=8.6e-29  Score=207.97  Aligned_cols=189  Identities=16%  Similarity=0.231  Sum_probs=138.8

Q ss_pred             CchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc------------------ccCCCCHHHHHHHH
Q psy323            8 NPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL------------------TRSSFSLTTFSKYV   68 (255)
Q Consensus         8 ~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~------------------~~~~l~~~~~~~~~   68 (255)
                      .+|+.+++.+ .|+||++   +.+++...+.. +.++++.........                  ....+++..++.++
T Consensus        73 ~~E~~~l~~l~~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  148 (327)
T 1fvr_A           73 AGELEVLCKLGHHPNIIN---LLGACEHRGYL-YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA  148 (327)
T ss_dssp             HHHHHHHTTCCCCTTBCC---EEEEEEETTEE-EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHH
T ss_pred             HHHHHHHHhccCCCchhh---hceeeeeCCce-EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHH
Confidence            3589999999 9999999   88888776653 555565544221111                  12469999999999


Q ss_pred             HHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHH
Q psy323           69 KQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWST  135 (255)
Q Consensus        69 ~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSl  135 (255)
                      .|++.|| |||           +||++ +.++.+||+|||+++............+ +.|+|||++.+..++.++||||+
T Consensus       149 ~qi~~aL~~LH~~~ivH~dlkp~NIl~-~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  227 (327)
T 1fvr_A          149 ADVARGMDYLSQKQFIHRDLAARNILV-GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY  227 (327)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEE-CGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCccCCCCccceEEE-cCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHH
Confidence            9999999 998           78898 5788999999999985544222222333 78999999998888999999999


Q ss_pred             HHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHH
Q psy323          136 ACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAK  214 (255)
Q Consensus       136 G~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
                      ||++++|++ |..||.+..      ..+....+.   ...                                        
T Consensus       228 G~il~ellt~g~~pf~~~~------~~~~~~~~~---~~~----------------------------------------  258 (327)
T 1fvr_A          228 GVLLWEIVSLGGTPYCGMT------CAELYEKLP---QGY----------------------------------------  258 (327)
T ss_dssp             HHHHHHHHTTSCCTTTTCC------HHHHHHHGG---GTC----------------------------------------
T ss_pred             HHHHHHHHcCCCCCCCCCc------HHHHHHHhh---cCC----------------------------------------
Confidence            999999998 999998543      111111110   000                                        


Q ss_pred             hcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          215 SYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       215 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      ....+...+.++.+++.+||+.||.+|||+++++++
T Consensus       259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            001223456889999999999999999999999875


No 193
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.94  E-value=4.3e-28  Score=200.53  Aligned_cols=198  Identities=13%  Similarity=0.116  Sum_probs=137.1

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|++++.   ....+...+...+.++++.........  ....+++..+..++.|++.|| |||     
T Consensus        51 ~~~e~~~l~~l~~~~~i~---~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  127 (296)
T 3uzp_A           51 LHIESKIYKMMQGGVGIP---TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI  127 (296)
T ss_dssp             HHHHHHHHHHHTTSTTCC---CEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHhhcCCCCC---ccccccCCCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            345889999999888776   444443333322444444422111111  245799999999999999999 998     


Q ss_pred             ------CCceee--CCCCcEEEeecCccccCCCCcc--------cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHH
Q psy323           79 ------EELLYP--TQNIEIVITDLEYVRPENDETI--------CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFE  141 (255)
Q Consensus        79 ------~niLl~--~~~~~~kl~DfG~a~~~~~~~~--------~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~  141 (255)
                            +||++.  +.++.+||+|||+++.......        .....+ +.|+|||++.+..++.++||||+||++++
T Consensus       128 H~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~  207 (296)
T 3uzp_A          128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY  207 (296)
T ss_dssp             CSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHH
Confidence                  789984  3678999999999987655321        123345 89999999999999999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChh
Q psy323          142 LVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKE  221 (255)
Q Consensus       142 l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
                      |++|+.||.+.....   ....+..+......++...                                       ....
T Consensus       208 l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~  245 (296)
T 3uzp_A          208 FNLGSLPWQGLKAAT---KRQKYERISEKKMSTPIEV---------------------------------------LCKG  245 (296)
T ss_dssp             HHHSSCTTSSCCCSS---SSSHHHHHHHHHHHSCHHH---------------------------------------HTTT
T ss_pred             HHhCCCCCCCcCchh---hhhhhhhhcccccCCchHH---------------------------------------HHhh
Confidence            999999998654322   1122222222111111000                                       1124


Q ss_pred             hHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          222 DAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       222 ~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .+.++.+++.+||+.||++|||++++++
T Consensus       246 ~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          246 YPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             SCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             CCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            5678999999999999999999998875


No 194
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.94  E-value=1.6e-28  Score=203.56  Aligned_cols=193  Identities=15%  Similarity=0.180  Sum_probs=135.9

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH------   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.......  ....+.+++..+..++.|++.|| |||      
T Consensus        59 ~~e~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H  134 (294)
T 4eqm_A           59 EREVHNSSQLSHQNIVS---MIDVDEEDDCY-YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVH  134 (294)
T ss_dssp             HHHHHHHTTCCBTTBCC---EEEEEECSSEE-EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHhcCCCCCCce---EEEeeeeCCeE-EEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            45899999999999999   88887766653 4455554432222  22235799999999999999999 998      


Q ss_pred             -----CCceeeCCCCcEEEeecCccccCCCCc--ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -----EELLYPTQNIEIVITDLEYVRPENDET--ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -----~niLl~~~~~~~kl~DfG~a~~~~~~~--~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                           +||++ +.++.+||+|||+++......  ......+ +.|+|||++.+..++.++||||+||++|+|++|+.||.
T Consensus       135 ~Dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~  213 (294)
T 4eqm_A          135 RDIKPQNILI-DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN  213 (294)
T ss_dssp             CCCCGGGEEE-CTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCCCHHHEEE-CCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence                 78999 588899999999998775432  1223345 99999999999999999999999999999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHHHhc-CCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMA-EIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      +.+      ....   ...... ..+....                                     ......+..+.++
T Consensus       214 ~~~------~~~~---~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~l~~l  247 (294)
T 4eqm_A          214 GET------AVSI---AIKHIQDSVPNVTT-------------------------------------DVRKDIPQSLSNV  247 (294)
T ss_dssp             SSC------HHHH---HHHHHSSCCCCHHH-------------------------------------HSCTTSCHHHHHH
T ss_pred             CCC------hHHH---HHHHhhccCCCcch-------------------------------------hcccCCCHHHHHH
Confidence            543      1111   111111 1110000                                     0123456789999


Q ss_pred             HHhccccCCCCCCCHHHHhcCc
Q psy323          230 LIPMLRLNPNKRETAEQCLQNE  251 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~hp  251 (255)
                      +.+||..||++||+..+.+.+.
T Consensus       248 i~~~l~~dp~~R~~~~~~l~~~  269 (294)
T 4eqm_A          248 ILRATEKDKANRYKTIQEMKDD  269 (294)
T ss_dssp             HHHHSCSSGGGSCSSHHHHHHH
T ss_pred             HHHHhcCCHhHccccHHHHHHH
Confidence            9999999999999544444443


No 195
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.94  E-value=3.9e-28  Score=204.25  Aligned_cols=195  Identities=14%  Similarity=0.147  Sum_probs=138.7

Q ss_pred             CCchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc--cCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT--RSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +..|+.+++.+ .|+||+.   +.+++...+.. +.++++..........  .+.+++..+..++.|++.|| |||    
T Consensus        51 ~~~E~~~l~~l~~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  126 (330)
T 2izr_A           51 LHLEYRFYKQLGSGDGIPQ---VYYFGPCGKYN-AMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL  126 (330)
T ss_dssp             HHHHHHHHHHHCSCTTSCC---EEEEEEETTEE-EEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHhhCCCCCCE---EEEEEecCCcc-EEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            44699999999 9999999   77777665552 4444444221111111  46799999999999999999 998    


Q ss_pred             -------CCceeeCCCCc-----EEEeecCccccCCCCcc--------cccccc-ccccchhhhhcCCCCCchhHHHHHH
Q psy323           79 -------EELLYPTQNIE-----IVITDLEYVRPENDETI--------CREDIH-RQYKAVELIYTKEFDMKIDIWSTAC  137 (255)
Q Consensus        79 -------~niLl~~~~~~-----~kl~DfG~a~~~~~~~~--------~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~  137 (255)
                             +|||+. .++.     +||+|||+++.......        .....+ +.|+|||++.+..++.++||||+||
T Consensus       127 iHrDlkp~Nill~-~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  205 (330)
T 2izr_A          127 IYRDVKPENFLIG-RPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGH  205 (330)
T ss_dssp             ECCCCCGGGEEEC-CGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             eccCCCHHHeeec-cCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHH
Confidence                   789994 6565     99999999987644211        123455 9999999999999999999999999


Q ss_pred             HHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcC
Q psy323          138 LTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYK  217 (255)
Q Consensus       138 il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
                      ++++|++|..||.+.....   ..+....+...-...+...                                       
T Consensus       206 il~ell~g~~Pf~~~~~~~---~~~~~~~i~~~~~~~~~~~---------------------------------------  243 (330)
T 2izr_A          206 MFMYFLRGSLPWQGLKADT---LKERYQKIGDTKRATPIEV---------------------------------------  243 (330)
T ss_dssp             HHHHHHHSSCTTTTCCCSS---HHHHHHHHHHHHHHSCHHH---------------------------------------
T ss_pred             HHHHHhcCCCCcccccccc---HHHHHHHHHhhhccCCHHH---------------------------------------
Confidence            9999999999998654221   1122222221111111000                                       


Q ss_pred             CChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          218 IPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       218 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .....+ ++.+++.+||+.||.+||+++++.+
T Consensus       244 ~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          244 LCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            001234 8999999999999999999988875


No 196
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.94  E-value=1.6e-28  Score=202.95  Aligned_cols=193  Identities=13%  Similarity=0.245  Sum_probs=127.4

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc---ccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK---NLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+++.+.|+||+.   +.++......  +.++++.......   ......+++..+..++.|++.|| |||    
T Consensus        67 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i  141 (289)
T 3og7_A           67 FKNEVGVLRKTRHVNILL---FMGYSTAPQL--AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI  141 (289)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEECSSSC--EEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCCcEEE---EEeeccCCcc--EEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            346899999999999998   6664333222  3333333321111   11235699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCC---cccccccc-ccccchhhhh---cCCCCCchhHHHHHHHHHHHhh
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDE---TICREDIH-RQYKAVELIY---TKEFDMKIDIWSTACLTFELVT  144 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~---~~~~~~~~-~~y~aPE~l~---~~~~~~~~DiwSlG~il~~l~~  144 (255)
                             +||++ +.++.+||+|||+++.....   .......+ +.|+|||++.   +..++.++||||+||++++|++
T Consensus       142 ~H~Dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~  220 (289)
T 3og7_A          142 IHRDLKSNNIFL-HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT  220 (289)
T ss_dssp             CCSCCCGGGEEE-ETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCccceEEE-CCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHH
Confidence                   78999 47889999999999866531   12233445 8999999997   4477889999999999999999


Q ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHH
Q psy323          145 GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAK  224 (255)
Q Consensus       145 g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      |+.||.+..      +.+.+.........++.                      ..                .....++.
T Consensus       221 g~~p~~~~~------~~~~~~~~~~~~~~~~~----------------------~~----------------~~~~~~~~  256 (289)
T 3og7_A          221 GQLPYSNIN------NRDQIIEMVGRGSLSPD----------------------LS----------------KVRSNCPK  256 (289)
T ss_dssp             SSCTTSSCC------CHHHHHHHHHHTSCCCC----------------------TT----------------SSCTTSCH
T ss_pred             CCCCccccc------hHHHHHHHhcccccCcc----------------------hh----------------hccccCCH
Confidence            999998654      33333333222111100                      00                01234568


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhc
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ++.+|+.+||+.||++|||+.++++
T Consensus       257 ~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          257 RMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHH
Confidence            8999999999999999999999986


No 197
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.94  E-value=5.6e-29  Score=208.84  Aligned_cols=210  Identities=12%  Similarity=0.100  Sum_probs=139.4

Q ss_pred             chhHHHhhhhhhHHHHHHHHHHHHhhhhh---hhhhhcCCCCCCC-CcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            9 PDVKVMENMFVDAIIARIWIKAVMKKKKL---LLKEILPIQPPHQ-HKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         9 ~e~~~l~~~~h~~iv~~~~l~~~~~~~~~---~~~~~~~~~~~l~-~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .|+.+++.+.|+||++   +++++.....   .++.++++..... ...+....+++..++.++.|++.|| |||     
T Consensus        67 ~E~~~l~~l~hpniv~---~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~  143 (322)
T 3soc_A           67 YEVYSLPGMKHENILQ---FIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPG  143 (322)
T ss_dssp             HHHHTSTTCCCTTBCC---EEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHhcCCCCCchh---hcceeccCCCCCceEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccc
Confidence            3778899999999999   8888876542   1244455544422 2223346699999999999999999 998     


Q ss_pred             ----------------CCceeeCCCCcEEEeecCccccCCCCcc---cccccc-ccccchhhhhcC-----CCCCchhHH
Q psy323           79 ----------------EELLYPTQNIEIVITDLEYVRPENDETI---CREDIH-RQYKAVELIYTK-----EFDMKIDIW  133 (255)
Q Consensus        79 ----------------~niLl~~~~~~~kl~DfG~a~~~~~~~~---~~~~~~-~~y~aPE~l~~~-----~~~~~~Diw  133 (255)
                                      +|||+ +.++.+||+|||+++.......   .....+ +.|+|||++.+.     .++.++|||
T Consensus       144 l~~~~~~~ivH~Dlkp~Nill-~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw  222 (322)
T 3soc_A          144 LKDGHKPAISHRDIKSKNVLL-KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMY  222 (322)
T ss_dssp             ETTEEECEEECSCCSGGGEEE-CTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHH
T ss_pred             cccccCCCEEeCCCChHhEEE-CCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhH
Confidence                            36777 5788999999999987654322   223455 999999999874     345688999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHH
Q psy323          134 STACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILA  213 (255)
Q Consensus       134 SlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (255)
                      |+||++|+|++|+.||.+.......      .......+.+....+.......          ...+.....+       
T Consensus       223 slG~il~el~tg~~pf~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-------  279 (322)
T 3soc_A          223 AMGLVLWELASRCTAADGPVDEYML------PFEEEIGQHPSLEDMQEVVVHK----------KKRPVLRDYW-------  279 (322)
T ss_dssp             HHHHHHHHHHTTBTTSSSCCCCCCC------TTHHHHCSSCCHHHHHHHHTTS----------CCCCCCCGGG-------
T ss_pred             HHHHHHHHHHhCCCCCCCCcchhcc------chhhhhccCCchhhhhhhhhcc----------cCCCCccccc-------
Confidence            9999999999999999865432111      0011111222211111110000          0000000000       


Q ss_pred             HhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          214 KSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       214 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                          .....+.++.+|+.+||+.||++|||+.++++
T Consensus       280 ----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          280 ----QKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             ----GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----cccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                11245677999999999999999999999985


No 198
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.94  E-value=2.1e-28  Score=216.70  Aligned_cols=189  Identities=16%  Similarity=0.214  Sum_probs=140.5

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc----ccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL----TRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +.+|+.+|+.+.|+||++   +++++...+.+ +.++++.........    ....+++..+..++.|++.|| |||   
T Consensus       263 ~~~E~~~l~~l~hpniv~---l~~~~~~~~~~-~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  338 (495)
T 1opk_A          263 FLKEAAVMKEIKHPNLVQ---LLGVCTREPPF-YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN  338 (495)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEECSSSSC-EEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCCCCEee---EEEEEecCCcE-EEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            345999999999999999   88888776553 445555443222111    235699999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCccc--ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETIC--REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GD  146 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~~--~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~  146 (255)
                              +|||+ +.++.+||+|||+++........  ....+ ..|+|||++.+..++.++||||+||++|+|++ |.
T Consensus       339 ivHrDlkp~NIll-~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~  417 (495)
T 1opk_A          339 FIHRNLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM  417 (495)
T ss_dssp             EECSCCSGGGEEE-CGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             cccCCCChhhEEE-CCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCC
Confidence                    78999 57889999999999887543211  11122 67999999999889999999999999999999 99


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+.+      .......+.....                                           ...+..++.++
T Consensus       418 ~p~~~~~------~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~l  448 (495)
T 1opk_A          418 SPYPGID------LSQVYELLEKDYR-------------------------------------------MERPEGCPEKV  448 (495)
T ss_dssp             CSSTTCC------GGGHHHHHHTTCC-------------------------------------------CCCCTTCCHHH
T ss_pred             CCCCCCC------HHHHHHHHHcCCC-------------------------------------------CCCCCCCCHHH
Confidence            9998654      1111111111000                                           01234566889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhc
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .+||.+||+.||++|||+.++++
T Consensus       449 ~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          449 YELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCcChhHCcCHHHHHH
Confidence            99999999999999999999875


No 199
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.94  E-value=2e-28  Score=204.34  Aligned_cols=191  Identities=13%  Similarity=0.240  Sum_probs=137.7

Q ss_pred             CchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc------------------ccCCCCHHHHHHHH
Q psy323            8 NPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL------------------TRSSFSLTTFSKYV   68 (255)
Q Consensus         8 ~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~------------------~~~~l~~~~~~~~~   68 (255)
                      .+|+.+++.+ .|+||++   +.+++...+..++.++++.........                  ....+++..+..++
T Consensus        78 ~~E~~~l~~l~~hp~iv~---~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (316)
T 2xir_A           78 MSELKILIHIGHHLNVVN---LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS  154 (316)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHH
T ss_pred             HHHHHHHHhcccCCCeee---EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHH
Confidence            3588999999 7899999   888776654423444444433111111                  12238999999999


Q ss_pred             HHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccc---ccccc-ccccchhhhhcCCCCCchhH
Q psy323           69 KQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETIC---REDIH-RQYKAVELIYTKEFDMKIDI  132 (255)
Q Consensus        69 ~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~-~~y~aPE~l~~~~~~~~~Di  132 (255)
                      .|++.|| |||           +||++ +.++.+||+|||+++........   ....+ +.|+|||++.+..++.++||
T Consensus       155 ~qi~~al~~lH~~~i~H~dikp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di  233 (316)
T 2xir_A          155 FQVAKGMEFLASRKCIHRDLAARNILL-SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV  233 (316)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEE-CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHHHHhCCcccccCccceEEE-CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHH
Confidence            9999999 998           68888 57889999999999876543221   12223 78999999999999999999


Q ss_pred             HHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHH
Q psy323          133 WSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRI  211 (255)
Q Consensus       133 wSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (255)
                      ||+||++++|++ |..||.+...      ...+.........+                                     
T Consensus       234 ~slG~il~~l~t~g~~p~~~~~~------~~~~~~~~~~~~~~-------------------------------------  270 (316)
T 2xir_A          234 WSFGVLLWEIFSLGASPYPGVKI------DEEFCRRLKEGTRM-------------------------------------  270 (316)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCC------SHHHHHHHHHTCCC-------------------------------------
T ss_pred             HHHHHHHHHHHhCCCCCCcccch------hHHHHHHhccCccC-------------------------------------
Confidence            999999999998 9999976531      12221111110000                                     


Q ss_pred             HHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          212 LAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       212 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                           ..+...+.++.+++.+||+.||.+|||+.++++|
T Consensus       271 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          271 -----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 0223456788999999999999999999999876


No 200
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.94  E-value=3.3e-28  Score=213.21  Aligned_cols=188  Identities=18%  Similarity=0.250  Sum_probs=135.8

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc----ccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL----TRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +.+|+.+|+.+.|+||++   +++++....  ++.++++.........    ....+++..+..++.|++.|| |||   
T Consensus       226 ~~~E~~~l~~l~hp~iv~---~~~~~~~~~--~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  300 (452)
T 1fmk_A          226 FLQEAQVMKKLRHEKLVQ---LYAVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN  300 (452)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEECSSS--CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhCCCCCEee---EEEEEcCCc--eEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            346999999999999999   887776532  2455555544322222    124699999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCccc--ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETIC--REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GD  146 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~~--~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~  146 (255)
                              +|||+ +.++.+||+|||+++........  ....+ ..|+|||++.+..++.++||||+||++|+|++ |+
T Consensus       301 ivHrDlkp~Nill-~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~  379 (452)
T 1fmk_A          301 YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR  379 (452)
T ss_dssp             CCCSCCSGGGEEE-CGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             eeCCCCChhhEEE-CCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCC
Confidence                    78999 57889999999999876542111  11122 67999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+..      ..+.+..+......                                           ..+..++..+
T Consensus       380 ~P~~~~~------~~~~~~~i~~~~~~-------------------------------------------~~~~~~~~~l  410 (452)
T 1fmk_A          380 VPYPGMV------NREVLDQVERGYRM-------------------------------------------PCPPECPESL  410 (452)
T ss_dssp             CSSTTCC------HHHHHHHHHTTCCC-------------------------------------------CCCTTSCHHH
T ss_pred             CCCCCCC------HHHHHHHHHcCCCC-------------------------------------------CCCCCCCHHH
Confidence            9998654      22222222111000                                           1234566889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhc
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .++|.+||+.||++|||++++++
T Consensus       411 ~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          411 HDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999999999999876


No 201
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.94  E-value=1.9e-28  Score=207.48  Aligned_cols=195  Identities=9%  Similarity=0.064  Sum_probs=130.1

Q ss_pred             hhHHHhhhhhhHHHHHHHHHHHHhh----hhhhhhhhcCCCC-CCCCcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323           10 DVKVMENMFVDAIIARIWIKAVMKK----KKLLLKEILPIQP-PHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus        10 e~~~l~~~~h~~iv~~~~l~~~~~~----~~~~~~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      |..+++.+.|+||++   +.+++..    ... ++.++++.. .+.......+.+++..++.++.|++.|| |||     
T Consensus        98 e~~~~~~l~h~ni~~---~~~~~~~~~~~~~~-~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv  173 (345)
T 2v62_A           98 KWIERKQLDYLGIPL---FYGSGLTEFKGRSY-RFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYV  173 (345)
T ss_dssp             HHHHHHTCSCCCCCC---EEEEEEEESSSCEE-EEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHhhccccccCcce---eecccccccCCCcE-EEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            445555566666666   5555544    222 233444331 1111112223799999999999999999 998     


Q ss_pred             ------CCceeeCCCC--cEEEeecCccccCCCCcc--------cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHH
Q psy323           79 ------EELLYPTQNI--EIVITDLEYVRPENDETI--------CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFE  141 (255)
Q Consensus        79 ------~niLl~~~~~--~~kl~DfG~a~~~~~~~~--------~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~  141 (255)
                            +|||+. .++  .+||+|||+++.+.....        .....+ +.|+|||++.+..++.++||||+||++|+
T Consensus       174 H~Dlkp~NIll~-~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  252 (345)
T 2v62_A          174 HGDIKAANLLLG-YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLR  252 (345)
T ss_dssp             CSCCSGGGEEEE-SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred             CCCcCHHHEEEc-cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence                  789995 555  999999999987654211        123345 89999999999899999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCccHHHHHH-HHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCCh
Q psy323          142 LVTGDYMFNPFESKYYTIDEHHILK-IIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPK  220 (255)
Q Consensus       142 l~~g~~pf~~~~~~~~~~~~~~l~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (255)
                      |++|+.||.+...     +...... ........+......                                   ....
T Consensus       253 ll~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~  292 (345)
T 2v62_A          253 WLCGKLPWEQNLK-----DPVAVQTAKTNLLDELPQSVLKW-----------------------------------APSG  292 (345)
T ss_dssp             HHHSSCTTGGGTT-----CHHHHHHHHHHHHHTTTHHHHHH-----------------------------------SCTT
T ss_pred             HHhCCCCcccccc-----ccHHHHHHHHhhcccccHHHHhh-----------------------------------cccc
Confidence            9999999964321     1222222 222222222211100                                   0012


Q ss_pred             hhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          221 EDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       221 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ..+.++.+++.+||..||++|||++++++
T Consensus       293 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          293 SSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             SCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            45678999999999999999999999875


No 202
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.94  E-value=2.5e-28  Score=209.02  Aligned_cols=189  Identities=15%  Similarity=0.247  Sum_probs=130.1

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.........   ....+++.++..++.|++.|| |||    
T Consensus        93 ~~~E~~~l~~l~h~niv~---~~~~~~~~~~~-~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  168 (373)
T 2qol_A           93 FLGEASIMGQFDHPNIIR---LEGVVTKSKPV-MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY  168 (373)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEECSSSSC-EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCCCCCe---EEEEEeeCCce-EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345999999999999999   88888766553 444555443222221   124699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcc--cccc--cc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-C
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETI--CRED--IH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-G  145 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~--~~~~--~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g  145 (255)
                             +|||+ +.++.+||+|||+++.......  .+..  .+ +.|+|||++.+..++.++||||+||++|+|++ |
T Consensus       169 vH~Dlkp~NIll-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g  247 (373)
T 2qol_A          169 VHRDLAARNILI-NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG  247 (373)
T ss_dssp             CCSCCCGGGEEE-CTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred             eCCCCCcceEEE-cCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCC
Confidence                   78899 5889999999999987754321  1111  12 57999999999999999999999999999997 9


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      +.||.+..      ..+....+......                                           ..+..++..
T Consensus       248 ~~P~~~~~------~~~~~~~i~~~~~~-------------------------------------------~~~~~~~~~  278 (373)
T 2qol_A          248 ERPYWEMS------NQDVIKAVDEGYRL-------------------------------------------PPPMDCPAA  278 (373)
T ss_dssp             -CTTTTCC------HHHHHHHHHTTEEC-------------------------------------------CCCTTCBHH
T ss_pred             CCCCCCCC------HHHHHHHHHcCCCC-------------------------------------------CCCccccHH
Confidence            99997543      22222222111000                                           012345678


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhc
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      +.+++.+||+.||++||+++++++
T Consensus       279 l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          279 LYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHhCcChhhCcCHHHHHH
Confidence            899999999999999999999875


No 203
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.94  E-value=2.7e-28  Score=198.90  Aligned_cols=190  Identities=14%  Similarity=0.212  Sum_probs=140.0

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.........   ..+.+++..+..++.|++.|| |||    
T Consensus        50 ~~~e~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  125 (267)
T 3t9t_A           50 FIEEAEVMMKLSHPKLVQ---LYGVCLEQAPI-CLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV  125 (267)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEECSSSSC-EEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCCCEee---EEEEEccCCCe-EEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            345899999999999999   88877766553 455555543322211   125699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcc--cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETI--CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDY  147 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~--~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~  147 (255)
                             +||++ +.++.+||+|||++........  .....+ +.|+|||++.+..++.++||||+|+++++|++ |..
T Consensus       126 ~H~dl~p~Nili-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~  204 (267)
T 3t9t_A          126 IHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI  204 (267)
T ss_dssp             CCSSCCGGGEEE-CGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCCCchheEEE-CCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCC
Confidence                   68888 5788999999999987654211  112223 68999999998899999999999999999999 899


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+..      .......+......                                           ..+...+..+.
T Consensus       205 p~~~~~------~~~~~~~i~~~~~~-------------------------------------------~~~~~~~~~l~  235 (267)
T 3t9t_A          205 PYENRS------NSEVVEDISTGFRL-------------------------------------------YKPRLASTHVY  235 (267)
T ss_dssp             TTTTCC------HHHHHHHHHTTCCC-------------------------------------------CCCTTSCHHHH
T ss_pred             CCCCCC------HHHHHHHHhcCCcC-------------------------------------------CCCccCcHHHH
Confidence            997543      22222222110000                                           01234567889


Q ss_pred             HHHHhccccCCCCCCCHHHHhcC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      +++.+||+.||++|||+.+++++
T Consensus       236 ~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          236 QIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999999999999864


No 204
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94  E-value=8.3e-28  Score=199.01  Aligned_cols=189  Identities=16%  Similarity=0.206  Sum_probs=136.8

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+...+.++++.........   ....+++..+..++.|++.|| |||     
T Consensus        70 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~  146 (298)
T 3pls_A           70 LREGLLMRGLNHPNVLA---LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFV  146 (298)
T ss_dssp             HHHHHHHHTCCCTTBCC---CCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhCCCCCeee---EEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            35899999999999999   888887655543445555443322221   135689999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCc-----ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhC-
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDET-----ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTG-  145 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~-----~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g-  145 (255)
                            +||++ +.++.+||+|||+++......     ......+ +.|+|||.+.+..++.++||||+||++++|++| 
T Consensus       147 H~dikp~Nili-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  225 (298)
T 3pls_A          147 HRDLAARNCML-DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG  225 (298)
T ss_dssp             CSCCSGGGEEE-CTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTS
T ss_pred             cCCCCcceEEE-cCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCC
Confidence                  78999 588899999999998665421     1122233 789999999998999999999999999999995 


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      .+||.+.+      ..+....+... ..+                                          ..+...+..
T Consensus       226 ~~~~~~~~------~~~~~~~~~~~-~~~------------------------------------------~~~~~~~~~  256 (298)
T 3pls_A          226 APPYRHID------PFDLTHFLAQG-RRL------------------------------------------PQPEYCPDS  256 (298)
T ss_dssp             CCTTTTSC------GGGHHHHHHTT-CCC------------------------------------------CCCTTCCHH
T ss_pred             CCCCccCC------HHHHHHHhhcC-CCC------------------------------------------CCCccchHH
Confidence            45554332      11111111110 000                                          022345678


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhc
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      +.+++.+||+.||.+|||++++++
T Consensus       257 l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          257 LYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHH
Confidence            899999999999999999999875


No 205
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.94  E-value=4.4e-28  Score=204.26  Aligned_cols=189  Identities=16%  Similarity=0.252  Sum_probs=137.7

Q ss_pred             CchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc------------------ccCCCCHHHHHHHH
Q psy323            8 NPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL------------------TRSSFSLTTFSKYV   68 (255)
Q Consensus         8 ~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~------------------~~~~l~~~~~~~~~   68 (255)
                      .+|+.+++.+ .|+||++   +.+++...+.. +.++++.........                  ....+++..+..++
T Consensus        88 ~~E~~~l~~l~~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  163 (334)
T 2pvf_A           88 VSEMEMMKMIGKHKNIIN---LLGACTQDGPL-YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT  163 (334)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEECSSSCC-EEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCEee---EEEEEccCCce-EEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHH
Confidence            3588999999 8999999   88877766553 444444433211111                  12348999999999


Q ss_pred             HHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccc---ccccc-ccccchhhhhcCCCCCchhH
Q psy323           69 KQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETIC---REDIH-RQYKAVELIYTKEFDMKIDI  132 (255)
Q Consensus        69 ~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~-~~y~aPE~l~~~~~~~~~Di  132 (255)
                      .|++.|| |||           +||++ +.++.+||+|||+++........   ....+ +.|+|||++.+..++.++||
T Consensus       164 ~qi~~aL~~LH~~~ivH~Dlkp~NIll-~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  242 (334)
T 2pvf_A          164 YQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  242 (334)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEE-CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHH
T ss_pred             HHHHHHHHHHHhCCeeCCCCccceEEE-cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHH
Confidence            9999999 998           78899 58889999999999876653221   12223 78999999998889999999


Q ss_pred             HHHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHH
Q psy323          133 WSTACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRI  211 (255)
Q Consensus       133 wSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (255)
                      ||+||++++|++ |..||.+..      ..+....+.... .+                                     
T Consensus       243 ~slG~il~ellt~g~~p~~~~~------~~~~~~~~~~~~-~~-------------------------------------  278 (334)
T 2pvf_A          243 WSFGVLMWEIFTLGGSPYPGIP------VEELFKLLKEGH-RM-------------------------------------  278 (334)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHHTC-CC-------------------------------------
T ss_pred             HHHHHHHHHHHhCCCCCcCcCC------HHHHHHHHhcCC-CC-------------------------------------
Confidence            999999999999 999997543      112111111100 00                                     


Q ss_pred             HHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          212 LAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       212 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                           ..+...+.++.+++.+||+.||.+|||+.+++++
T Consensus       279 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          279 -----DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                 1223456789999999999999999999999864


No 206
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.94  E-value=7.5e-28  Score=199.48  Aligned_cols=189  Identities=14%  Similarity=0.212  Sum_probs=135.7

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|+||++   +.+++.......+.++++.........   ....+++..+..++.|++.|| |||     
T Consensus        74 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~  150 (298)
T 3f66_A           74 LTEGIIMKDFSHPNVLS---LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV  150 (298)
T ss_dssp             HHHHHHHHTCCCTTBCC---CCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhCCCCCEee---eeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            35899999999999999   888754433322444454443222221   235689999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcc-----cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-C
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETI-----CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-G  145 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g  145 (255)
                            +||++ +.++.+||+|||+++.......     .....+ +.|+|||.+.+..++.++||||+||++++|++ |
T Consensus       151 H~dikp~Nil~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~  229 (298)
T 3f66_A          151 HRDLAARNCML-DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG  229 (298)
T ss_dssp             CSCCSGGGEEE-CTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CCCCchheEEE-CCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence                  78999 5888999999999987755321     112223 67999999999999999999999999999999 6


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      .+||.+.+.      .+....+......                                           ..+...+..
T Consensus       230 ~~~~~~~~~------~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~  260 (298)
T 3f66_A          230 APPYPDVNT------FDITVYLLQGRRL-------------------------------------------LQPEYCPDP  260 (298)
T ss_dssp             CCSSTTSCT------TTHHHHHHTTCCC-------------------------------------------CCCTTCCHH
T ss_pred             CCCCccCCH------HHHHHHHhcCCCC-------------------------------------------CCCccCCHH
Confidence            677765431      1222111110000                                           012345678


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhc
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      +.+++.+||+.||++|||++++++
T Consensus       261 l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          261 LYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHH
Confidence            899999999999999999999885


No 207
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.94  E-value=7.2e-28  Score=199.38  Aligned_cols=196  Identities=11%  Similarity=0.099  Sum_probs=137.4

Q ss_pred             CCchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc--cCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT--RSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+++.+ .|++++.   +..++...... +.++++........+.  ...+++..+..++.|++.|| |||    
T Consensus        52 ~~~e~~~~~~l~~~~~i~~---~~~~~~~~~~~-~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  127 (298)
T 1csn_A           52 LRDEYRTYKLLAGCTGIPN---VYYFGQEGLHN-VLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL  127 (298)
T ss_dssp             HHHHHHHHHHTTTCTTCCC---EEEEEEETTEE-EEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             HHHHHHHHHHHhcCCCCCe---EEeecCCCcee-EEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            34588899998 7888888   77666555442 3444444221111111  24699999999999999999 998    


Q ss_pred             -------CCceeeCCCCc-----EEEeecCccccCCCCcc--------cccccc-ccccchhhhhcCCCCCchhHHHHHH
Q psy323           79 -------EELLYPTQNIE-----IVITDLEYVRPENDETI--------CREDIH-RQYKAVELIYTKEFDMKIDIWSTAC  137 (255)
Q Consensus        79 -------~niLl~~~~~~-----~kl~DfG~a~~~~~~~~--------~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~  137 (255)
                             +||++. .++.     +||+|||+++.......        .....+ +.|+|||++.+..++.++||||+||
T Consensus       128 vH~Dlkp~NIl~~-~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  206 (298)
T 1csn_A          128 VYRDIKPDNFLIG-RPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH  206 (298)
T ss_dssp             ECCCCCGGGEEEC-CSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             ecCCCCHHHEEec-cCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHH
Confidence                   688884 5444     99999999987654211        223345 8999999999989999999999999


Q ss_pred             HHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcC
Q psy323          138 LTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYK  217 (255)
Q Consensus       138 il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
                      ++++|++|+.||.+.....   ....+..+......++...                                       
T Consensus       207 il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~---------------------------------------  244 (298)
T 1csn_A          207 VFMYFLRGSLPWQGLKAAT---NKQKYERIGEKKQSTPLRE---------------------------------------  244 (298)
T ss_dssp             HHHHHHHSSCTTSSCCSCC---HHHHHHHHHHHHHHSCHHH---------------------------------------
T ss_pred             HHHHHHcCCCCcchhhccc---cHHHHHHHHhhccCccHHH---------------------------------------
Confidence            9999999999998654221   2222233322211111000                                       


Q ss_pred             CChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          218 IPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       218 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .....+.++.+++.+||+.||++|||++++++
T Consensus       245 ~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          245 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence            01245678999999999999999999998875


No 208
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.94  E-value=7.1e-28  Score=201.03  Aligned_cols=190  Identities=15%  Similarity=0.225  Sum_probs=131.4

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhh----hhhhhcCCCCCCCCcc--------cccCCCCHHHHHHHHHHHHHhh
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKL----LLKEILPIQPPHQHKN--------LTRSSFSLTTFSKYVKQISQFV   75 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~----~~~~~~~~~~~l~~~~--------~~~~~l~~~~~~~~~~qll~~l   75 (255)
                      .+|+.+++.+.|+||++   +.+++...+.    ..+.++++........        .....+++..++.++.|++.||
T Consensus        84 ~~e~~~l~~l~h~~iv~---~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL  160 (313)
T 3brb_A           84 LSEAACMKDFSHPNVIR---LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM  160 (313)
T ss_dssp             HHHHHHHHTCCCTTBCC---CCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCeee---eeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHH
Confidence            45899999999999999   8777665432    1133333333322111        1235699999999999999999


Q ss_pred             -ccC-----------CCceeeCCCCcEEEeecCccccCCCCccc---ccccc-ccccchhhhhcCCCCCchhHHHHHHHH
Q psy323           76 -YMN-----------EELLYPTQNIEIVITDLEYVRPENDETIC---REDIH-RQYKAVELIYTKEFDMKIDIWSTACLT  139 (255)
Q Consensus        76 -ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il  139 (255)
                       |||           +||++ +.++.+||+|||+++........   ....+ +.|+|||.+.+..++.++||||+||++
T Consensus       161 ~~LH~~~ivH~dikp~NIli-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  239 (313)
T 3brb_A          161 EYLSNRNFLHRDLAARNCML-RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM  239 (313)
T ss_dssp             HHHHTTTCCCCCCSGGGEEE-CTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHH
T ss_pred             HHHHhCCcccCCCCcceEEE-cCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHH
Confidence             998           68888 57889999999999876543211   12223 789999999999999999999999999


Q ss_pred             HHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCC
Q psy323          140 FELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKI  218 (255)
Q Consensus       140 ~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (255)
                      ++|++ |..||.+..      .......+..  +..                                         ...
T Consensus       240 ~el~~~g~~p~~~~~------~~~~~~~~~~--~~~-----------------------------------------~~~  270 (313)
T 3brb_A          240 WEIATRGMTPYPGVQ------NHEMYDYLLH--GHR-----------------------------------------LKQ  270 (313)
T ss_dssp             HHHHTTSCCSSTTCC------GGGHHHHHHT--TCC-----------------------------------------CCC
T ss_pred             HHHHhcCCCCCccCC------HHHHHHHHHc--CCC-----------------------------------------CCC
Confidence            99999 999997554      2222221111  000                                         002


Q ss_pred             ChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          219 PKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       219 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      +...+.++.+++.+||..||++|||+.+++++
T Consensus       271 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          271 PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            23456789999999999999999999999864


No 209
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.94  E-value=4.3e-28  Score=203.03  Aligned_cols=189  Identities=14%  Similarity=0.244  Sum_probs=138.9

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc------------cCCCCHHHHHHHHHHHHHhh
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT------------RSSFSLTTFSKYVKQISQFV   75 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~l~~~~~~~~~~qll~~l   75 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++..........            ...+++..+..++.|++.||
T Consensus        76 ~~E~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  151 (322)
T 1p4o_A           76 LNEASVMKEFNCHHVVR---LLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM  151 (322)
T ss_dssp             HHHHHHGGGCCCTTBCC---EEEEECSSSSC-EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCEee---eEEEEccCCcc-EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHH
Confidence            35899999999999999   88887766553 4445544432221111            14579999999999999999


Q ss_pred             -ccC-----------CCceeeCCCCcEEEeecCccccCCCCccc---ccccc-ccccchhhhhcCCCCCchhHHHHHHHH
Q psy323           76 -YMN-----------EELLYPTQNIEIVITDLEYVRPENDETIC---REDIH-RQYKAVELIYTKEFDMKIDIWSTACLT  139 (255)
Q Consensus        76 -ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il  139 (255)
                       |||           +||++ +.++.+||+|||+++........   ....+ +.|+|||++.+..++.++||||+||++
T Consensus       152 ~~lH~~~i~H~dikp~NIli-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  230 (322)
T 1p4o_A          152 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL  230 (322)
T ss_dssp             HHHHHTTCBCSCCSGGGEEE-CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHHHHCCCccCCCccceEEE-cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHH
Confidence             998           68899 57889999999999866542211   12223 789999999999999999999999999


Q ss_pred             HHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCC
Q psy323          140 FELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKI  218 (255)
Q Consensus       140 ~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (255)
                      ++|++ |..||.+..      .......+.. ...+                                          ..
T Consensus       231 ~el~~~g~~p~~~~~------~~~~~~~~~~-~~~~------------------------------------------~~  261 (322)
T 1p4o_A          231 WEIATLAEQPYQGLS------NEQVLRFVME-GGLL------------------------------------------DK  261 (322)
T ss_dssp             HHHHHTSCCTTTTSC------HHHHHHHHHT-TCCC------------------------------------------CC
T ss_pred             HHHHhcCCCccccCC------HHHHHHHHHc-CCcC------------------------------------------CC
Confidence            99999 899997543      1121111111 0000                                          02


Q ss_pred             ChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          219 PKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       219 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      +...+..+.+++.+||+.||++|||+.++++|
T Consensus       262 ~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          262 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            23456788999999999999999999999986


No 210
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.94  E-value=5.4e-28  Score=201.51  Aligned_cols=186  Identities=15%  Similarity=0.187  Sum_probs=128.0

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc-----ccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL-----TRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      +.+|+.+++.+.|+||++   +.+++.....+++++++   .......     ....+++..+..++.|++.|| |||  
T Consensus        48 ~~~E~~~l~~l~hp~iv~---~~~~~~~~~~lv~e~~~---~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  121 (307)
T 2eva_A           48 FIVELRQLSRVNHPNIVK---LYGACLNPVCLVMEYAE---GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM  121 (307)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEBCTTTTEEEEECCT---TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCCCcCe---EEEEEcCCcEEEEEcCC---CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhC
Confidence            345899999999999999   87777654434444443   2221111     112488999999999999999 997  


Q ss_pred             ------------CCceeeCCCC-cEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh
Q psy323           79 ------------EELLYPTQNI-EIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT  144 (255)
Q Consensus        79 ------------~niLl~~~~~-~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~  144 (255)
                                  +||++. .++ .+||+|||++.....  ......+ +.|+|||++.+..++.++||||+||++++|++
T Consensus       122 ~~~~ivH~dlkp~NIll~-~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  198 (307)
T 2eva_A          122 QPKALIHRDLKPPNLLLV-AGGTVLKICDFGTACDIQT--HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT  198 (307)
T ss_dssp             SSSCCCCCCCSGGGEEEE-TTTTEEEECCCCC--------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCCeecCCCChhHEEEe-CCCCEEEEccccccccccc--ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHH
Confidence                        478885 444 589999999986654  2334456 99999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHh-cCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhH
Q psy323          145 GDYMFNPFESKYYTIDEHHILKIIQLM-AEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDA  223 (255)
Q Consensus       145 g~~pf~~~~~~~~~~~~~~l~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (255)
                      |+.||......     ...+  ..... +..+                                         ..+...+
T Consensus       199 g~~p~~~~~~~-----~~~~--~~~~~~~~~~-----------------------------------------~~~~~~~  230 (307)
T 2eva_A          199 RRKPFDEIGGP-----AFRI--MWAVHNGTRP-----------------------------------------PLIKNLP  230 (307)
T ss_dssp             TCCTTTTTCSS-----HHHH--HHHHHTTCCC-----------------------------------------CCBTTCC
T ss_pred             CCCCchhhCcc-----HHHH--HHHHhcCCCC-----------------------------------------CcccccC
Confidence            99999754311     1111  11111 1000                                         0123456


Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          224 KQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       224 ~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ..+.+++.+||+.||++|||++++++
T Consensus       231 ~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          231 KPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            78899999999999999999999986


No 211
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.94  E-value=5.4e-28  Score=199.31  Aligned_cols=188  Identities=16%  Similarity=0.212  Sum_probs=138.6

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc----ccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK----NLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.......    ......+++..+..++.|++.|| |||    
T Consensus        57 ~~E~~~l~~l~h~~i~~---~~~~~~~~~~~-~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  132 (288)
T 3kfa_A           57 LKEAAVMKEIKHPNLVQ---LLGVCTREPPF-YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF  132 (288)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECSSSSE-EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhCCCCCEee---EEEEEccCCCE-EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCc
Confidence            45899999999999999   88887766653 4444444322111    11235699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCccc--ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETIC--REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDY  147 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~--~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~  147 (255)
                             +||++ +.++.+||+|||++.........  ....+ +.|+|||++.+..++.++||||+|+++++|++ |..
T Consensus       133 ~H~dikp~Nil~-~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~  211 (288)
T 3kfa_A          133 IHRDLAARNCLV-GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS  211 (288)
T ss_dssp             CCSCCSGGGEEE-CGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cCCCCCcceEEE-cCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                   78898 57889999999999877653221  11122 67999999999999999999999999999999 999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+.+      .......+.... .                                          ...+...+.++.
T Consensus       212 p~~~~~------~~~~~~~~~~~~-~------------------------------------------~~~~~~~~~~l~  242 (288)
T 3kfa_A          212 PYPGID------LSQVYELLEKDY-R------------------------------------------MERPEGCPEKVY  242 (288)
T ss_dssp             SSTTCC------GGGHHHHHHTTC-C------------------------------------------CCCCTTCCHHHH
T ss_pred             CCCCCC------HHHHHHHHhccC-C------------------------------------------CCCCCCCCHHHH
Confidence            998543      111111111100 0                                          012234568899


Q ss_pred             HHHHhccccCCCCCCCHHHHhc
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      +++.+||..||.+|||++++++
T Consensus       243 ~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          243 ELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhCCChhhCcCHHHHHH
Confidence            9999999999999999999875


No 212
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.94  E-value=9.9e-28  Score=201.27  Aligned_cols=207  Identities=13%  Similarity=0.182  Sum_probs=140.3

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCC------cccccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQH------KNLTRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      .+|+++++.+.|+||++   +.+++...+.. +.++++......      .......+++..+..++.|++.|| |||  
T Consensus        75 ~~e~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  150 (326)
T 3uim_A           75 QTEVEMISMAVHRNLLR---LRGFCMTPTER-LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH  150 (326)
T ss_dssp             HHHHHGGGTCCCTTBCC---CCEEECCSSCC-EEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhccCCCccc---eEEEEecCCce-EEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            45899999999999999   88888766653 344444333221      111234599999999999999999 998  


Q ss_pred             ------------CCceeeCCCCcEEEeecCccccCCCCc--ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHh
Q psy323           79 ------------EELLYPTQNIEIVITDLEYVRPENDET--ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELV  143 (255)
Q Consensus        79 ------------~niLl~~~~~~~kl~DfG~a~~~~~~~--~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~  143 (255)
                                  +|||+ +.++.+||+|||+++......  ......+ +.|+|||++.+..++.++||||+||++++|+
T Consensus       151 ~~~~ivH~Dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  229 (326)
T 3uim_A          151 CDPKIIHRDVKAANILL-DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI  229 (326)
T ss_dssp             SSSCEECCCCSGGGEEE-CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEeCCCchhhEEE-CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHH
Confidence                        57788 578899999999998765421  2233345 9999999999988999999999999999999


Q ss_pred             hCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhH
Q psy323          144 TGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDA  223 (255)
Q Consensus       144 ~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (255)
                      +|+.||........ .+......+.......            .+.....      ....            ...+...+
T Consensus       230 ~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~------------~~~~~~~------~~~~------------~~~~~~~~  278 (326)
T 3uim_A          230 TGQRAFDLARLAND-DDVMLLDWVKGLLKEK------------KLEALVD------VDLQ------------GNYKDEEV  278 (326)
T ss_dssp             HCCCSBCHHHHTTT-SCSBHHHHHTTTTSSC------------CSTTSSC------TTCT------------TSCCHHHH
T ss_pred             hCCCcccccccccc-cchhHHHHHHHHhhch------------hhhhhcC------hhhc------------cccCHHHH
Confidence            99999962100000 0000000000000000            0000000      0000            01335677


Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          224 KQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       224 ~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      .++.+++.+||+.||++|||+.++++|
T Consensus       279 ~~l~~li~~cl~~dP~~Rps~~ell~~  305 (326)
T 3uim_A          279 EQLIQVALLCTQSSPMERPKMSEVVRM  305 (326)
T ss_dssp             HHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCccCCCHHHHHHH
Confidence            899999999999999999999999986


No 213
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.94  E-value=2.9e-28  Score=221.52  Aligned_cols=188  Identities=12%  Similarity=0.153  Sum_probs=138.0

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+++|+.+.|+||++   +++++.....  +.++++.....  ........+++..+..++.|++.|| |||     
T Consensus       417 ~~~E~~il~~l~hpnIv~---l~~~~~~~~~--~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~ii  491 (635)
T 4fl3_A          417 LLAEANVMQQLDNPYIVR---MIGICEAESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFV  491 (635)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEESSSE--EEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhCCCCCEee---EEEEEecCCE--EEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            446999999999999999   8887765443  33444443322  1122345699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCccc----ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETIC----REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GD  146 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~  146 (255)
                            +|||+. .++.+||+|||+|+.+......    +...+ +.|+|||++.+..++.++||||+||++++|++ |+
T Consensus       492 HrDLkp~NILl~-~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~  570 (635)
T 4fl3_A          492 HRDLAARNVLLV-TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ  570 (635)
T ss_dssp             CSCCSGGGEEEE-ETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCCCChHhEEEe-CCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                  799994 7889999999999877543211    11222 67999999999999999999999999999998 99


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+.+      ..+....+... ..+                                          ..+..++.++
T Consensus       571 ~Pf~~~~------~~~~~~~i~~~-~~~------------------------------------------~~p~~~~~~l  601 (635)
T 4fl3_A          571 KPYRGMK------GSEVTAMLEKG-ERM------------------------------------------GCPAGCPREM  601 (635)
T ss_dssp             CSSTTCC------HHHHHHHHHTT-CCC------------------------------------------CCCTTCCHHH
T ss_pred             CCCCCCC------HHHHHHHHHcC-CCC------------------------------------------CCCCCCCHHH
Confidence            9998654      22222222110 000                                          1234567889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhc
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .++|.+||+.||++|||++++++
T Consensus       602 ~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          602 YDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHH
Confidence            99999999999999999999875


No 214
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.94  E-value=4.4e-28  Score=203.97  Aligned_cols=191  Identities=16%  Similarity=0.216  Sum_probs=138.6

Q ss_pred             CCchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc----------------ccCCCCHHHHHHHHH
Q psy323            7 VNPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL----------------TRSSFSLTTFSKYVK   69 (255)
Q Consensus         7 ~~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~----------------~~~~l~~~~~~~~~~   69 (255)
                      +.+|+.+++.+ .|+||++   +.+++...+.. +.++++.........                ....+++..+..++.
T Consensus        96 ~~~E~~~l~~l~~h~~iv~---~~~~~~~~~~~-~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (333)
T 2i1m_A           96 LMSELKIMSHLGQHENIVN---LLGACTHGGPV-LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS  171 (333)
T ss_dssp             HHHHHHHHHHHCCCTTBCC---EEEEECSSSSC-EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCCeee---EEEEEecCCce-EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHH
Confidence            34689999999 8999999   88887766553 444554433211111                134689999999999


Q ss_pred             HHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccc---ccccc-ccccchhhhhcCCCCCchhHH
Q psy323           70 QISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETIC---REDIH-RQYKAVELIYTKEFDMKIDIW  133 (255)
Q Consensus        70 qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~---~~~~~-~~y~aPE~l~~~~~~~~~Diw  133 (255)
                      |++.|| |||           +||++ +.++.+||+|||+++........   ....+ +.|+|||++.+..++.++|||
T Consensus       172 qi~~~l~~lH~~~ivH~Dlkp~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  250 (333)
T 2i1m_A          172 QVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW  250 (333)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGCEE-EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHHHhcCCcccCCcccceEEE-CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHH
Confidence            999999 998           78999 47889999999999866442211   11222 689999999999999999999


Q ss_pred             HHHHHHHHHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHH
Q psy323          134 STACLTFELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRIL  212 (255)
Q Consensus       134 SlG~il~~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (255)
                      |+||++++|++ |..||.+..      .......+......+                                      
T Consensus       251 slG~il~el~t~g~~p~~~~~------~~~~~~~~~~~~~~~--------------------------------------  286 (333)
T 2i1m_A          251 SYGILLWEIFSLGLNPYPGIL------VNSKFYKLVKDGYQM--------------------------------------  286 (333)
T ss_dssp             HHHHHHHHHTTTSCCSSTTCC------SSHHHHHHHHHTCCC--------------------------------------
T ss_pred             HHHHHHHHHHcCCCCCCcccc------hhHHHHHHHhcCCCC--------------------------------------
Confidence            99999999998 999998654      112222222111000                                      


Q ss_pred             HHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          213 AKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       213 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                          ..+...+.++.+++.+||+.||.+|||+.+++++
T Consensus       287 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          287 ----AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence                0123345788999999999999999999999863


No 215
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94  E-value=4.2e-28  Score=204.46  Aligned_cols=189  Identities=15%  Similarity=0.252  Sum_probs=133.1

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.........   ..+.+++..+..++.|++.|| |||     
T Consensus        94 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv  169 (333)
T 1mqb_A           94 LGEAGIMGQFSHHNIIR---LEGVISKYKPM-MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV  169 (333)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEECSSSSE-EEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhCCCCCCCc---EEEEEecCCCc-EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            45899999999999999   88887766553 444554443221111   235699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCccc--c--cccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETIC--R--EDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GD  146 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~--~--~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~  146 (255)
                            +||++ +.++.+||+|||+++........  .  ...+ +.|+|||++.+..++.++||||+||++++|++ |.
T Consensus       170 H~Dikp~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  248 (333)
T 1mqb_A          170 HRDLAARNILV-NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE  248 (333)
T ss_dssp             CSCCCGGGEEE-CTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCCCChheEEE-CCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCC
Confidence                  68898 57889999999999877542211  1  1122 67999999998899999999999999999998 99


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+..      ..+....+.... .+                                          ..+...+.++
T Consensus       249 ~pf~~~~------~~~~~~~~~~~~-~~------------------------------------------~~~~~~~~~l  279 (333)
T 1mqb_A          249 RPYWELS------NHEVMKAINDGF-RL------------------------------------------PTPMDCPSAI  279 (333)
T ss_dssp             CTTTTCC------HHHHHHHHHTTC-CC------------------------------------------CCCTTCBHHH
T ss_pred             CCcccCC------HHHHHHHHHCCC-cC------------------------------------------CCcccCCHHH
Confidence            9997543      222222221100 00                                          0223456788


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      .+++.+||+.||++||++.+++++
T Consensus       280 ~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          280 YQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999998763


No 216
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.94  E-value=4.9e-28  Score=200.40  Aligned_cols=204  Identities=15%  Similarity=0.202  Sum_probs=136.0

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhh-hhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKL-LLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+. .++.++++.........   ....+++..+..++.|++.|| |||   
T Consensus        58 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  134 (295)
T 3ugc_A           58 FEREIEILKSLQHDNIVK---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR  134 (295)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhCCCCCEee---EEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence            346999999999999999   7776644332 22444444433222211   123599999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCccc----ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETIC----REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g  145 (255)
                              +||++ +.++.+||+|||+++........    ....+ ..|+|||++.+..++.++||||+||++++|++|
T Consensus       135 ivH~Dikp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g  213 (295)
T 3ugc_A          135 YIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY  213 (295)
T ss_dssp             CCCSCCSGGGEEE-EETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHT
T ss_pred             cccCCCCHhhEEE-cCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhc
Confidence                    78999 47889999999999877553211    11223 679999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHH--hcCCChhhH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAK--SYKIPKEDA  223 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  223 (255)
                      ..|+....           .......+..+..........                        +.+..  ....+..++
T Consensus       214 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~  258 (295)
T 3ugc_A          214 IEKSKSPP-----------AEFMRMIGNDKQGQMIVFHLI------------------------ELLKNNGRLPRPDGCP  258 (295)
T ss_dssp             TCTTCSHH-----------HHHHHHHCTTCCTHHHHHHHH------------------------HHHHTTCCCCCCTTCC
T ss_pred             ccccCCCh-----------HHHHhhhcCccccchhHHHHH------------------------HHHhccCcCCCCcCcC
Confidence            99886321           112222222211110000000                        00000  111345667


Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          224 KQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       224 ~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .++.+++.+||+.||++|||+.++++
T Consensus       259 ~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          259 DEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            89999999999999999999999875


No 217
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.94  E-value=1.1e-27  Score=196.56  Aligned_cols=187  Identities=16%  Similarity=0.247  Sum_probs=136.3

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccccc----CCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLTR----SSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+|+++++.+.|+||++   +.+++.....  +.++++...........    ..+++..+..++.|++.|| |||    
T Consensus        56 ~~E~~~l~~l~h~~i~~---~~~~~~~~~~--~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  130 (279)
T 1qpc_A           56 LAEANLMKQLQHQRLVR---LYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY  130 (279)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECSSSC--EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHhCCCcCcce---EEEEEcCCCc--EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            45899999999999999   7777654432  33444433322222211    2699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCccc--ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETIC--REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDY  147 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~--~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~  147 (255)
                             +||++ +.++.+||+|||++.........  ....+ +.|+|||++.+..++.++||||+||++++|++ |+.
T Consensus       131 ~H~dikp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  209 (279)
T 1qpc_A          131 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI  209 (279)
T ss_dssp             ECSCCSGGGEEE-CTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eccCCCHhhEEE-cCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCC
Confidence                   68888 58889999999999877653211  11223 67999999998888999999999999999999 999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+..      ..+....+......                                           ..+...+.++.
T Consensus       210 p~~~~~------~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~l~  240 (279)
T 1qpc_A          210 PYPGMT------NPEVIQNLERGYRM-------------------------------------------VRPDNCPEELY  240 (279)
T ss_dssp             SSTTCC------HHHHHHHHHTTCCC-------------------------------------------CCCTTCCHHHH
T ss_pred             CCcccC------HHHHHHHHhcccCC-------------------------------------------CCcccccHHHH
Confidence            998543      22222221110000                                           02234568899


Q ss_pred             HHHHhccccCCCCCCCHHHHhc
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      +++.+||..||++|||++++++
T Consensus       241 ~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          241 QLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999999875


No 218
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.94  E-value=5.5e-28  Score=198.63  Aligned_cols=189  Identities=13%  Similarity=0.136  Sum_probs=140.5

Q ss_pred             CCCchhHHHhhhhhhHHHHHHHHHHHHhhh---------------hhhhhhhcCCCCCCCCccc----ccCCCCHHHHHH
Q psy323            6 PVNPDVKVMENMFVDAIIARIWIKAVMKKK---------------KLLLKEILPIQPPHQHKNL----TRSSFSLTTFSK   66 (255)
Q Consensus         6 ~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~---------------~~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~   66 (255)
                      .+.+|+++++.+.|+||++   +.+++...               ...++.++++.........    ....+++..++.
T Consensus        50 ~~~~e~~~l~~l~h~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  126 (284)
T 2a19_B           50 KAEREVKALAKLDHVNIVH---YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE  126 (284)
T ss_dssp             GGHHHHHHHHHCCCTTBCC---EEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCEEE---EeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHH
Confidence            3456999999999999998   76665431               1123455555544322211    235799999999


Q ss_pred             HHHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHH
Q psy323           67 YVKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIW  133 (255)
Q Consensus        67 ~~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~Diw  133 (255)
                      ++.|++.|| |||           +||++ +.++.+||+|||++.............+ +.|+|||++.+..++.++|||
T Consensus       127 i~~qi~~~l~~lH~~~i~H~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  205 (284)
T 2a19_B          127 LFEQITKGVDYIHSKKLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLY  205 (284)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEE-EETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHH
T ss_pred             HHHHHHHHHHHHHhCCeeeccCCHHHEEE-cCCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhH
Confidence            999999999 998           78888 4788999999999988766444444556 999999999998999999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHH
Q psy323          134 STACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILA  213 (255)
Q Consensus       134 SlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (255)
                      |+||++++|++|..|+.         .....   ......                                        
T Consensus       206 slG~il~~l~~~~~~~~---------~~~~~---~~~~~~----------------------------------------  233 (284)
T 2a19_B          206 ALGLILAELLHVCDTAF---------ETSKF---FTDLRD----------------------------------------  233 (284)
T ss_dssp             HHHHHHHHHHSCCSSHH---------HHHHH---HHHHHT----------------------------------------
T ss_pred             HHHHHHHHHHhcCCcch---------hHHHH---HHHhhc----------------------------------------
Confidence            99999999999988775         11111   110000                                        


Q ss_pred             HhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcC
Q psy323          214 KSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEW  252 (255)
Q Consensus       214 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  252 (255)
                        ...+...+.++.+++.+||+.||++|||+.++++|.+
T Consensus       234 --~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~  270 (284)
T 2a19_B          234 --GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT  270 (284)
T ss_dssp             --TCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             --ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence              0012334577889999999999999999999999864


No 219
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.94  E-value=4.1e-28  Score=199.19  Aligned_cols=187  Identities=14%  Similarity=0.194  Sum_probs=130.2

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccc----cCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLT----RSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+|+.+++.+.|+|+++   +.+++...+..++.++++..........    ...+++..+..++.|++.|| |||    
T Consensus        62 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  138 (278)
T 1byg_A           62 LAEASVMTQLRHSNLVQ---LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF  138 (278)
T ss_dssp             HHTHHHHTTCCCTTBCC---EEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhCCCCCEee---EEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            45999999999999999   7777544433234555554432211111    12389999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCCCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDYMF  149 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~pf  149 (255)
                             +||++ +.++.+||+|||++......  .....+ +.|+|||++.+..++.++||||+|+++++|++ |..||
T Consensus       139 ~H~dlkp~Nil~-~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~  215 (278)
T 1byg_A          139 VHRDLAARNVLV-SEDNVAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY  215 (278)
T ss_dssp             CCSCCSGGGEEE-CTTSCEEECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSC
T ss_pred             cccCCCcceEEE-eCCCcEEEeecccccccccc--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCC
Confidence                   68888 57889999999999866542  222334 88999999999899999999999999999998 99999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+..      ..+....+...  ..                                         ...+...++.+.++
T Consensus       216 ~~~~------~~~~~~~~~~~--~~-----------------------------------------~~~~~~~~~~l~~l  246 (278)
T 1byg_A          216 PRIP------LKDVVPRVEKG--YK-----------------------------------------MDAPDGCPPAVYEV  246 (278)
T ss_dssp             TTSC------GGGHHHHHTTT--CC-----------------------------------------CCCCTTCCHHHHHH
T ss_pred             CCCC------HHHHHHHHhcC--CC-----------------------------------------CCCcccCCHHHHHH
Confidence            7543      11111111100  00                                         01224556889999


Q ss_pred             HHhccccCCCCCCCHHHHhc
Q psy323          230 LIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       230 i~~~L~~dP~~R~t~~e~l~  249 (255)
                      +.+||+.||++|||+.++++
T Consensus       247 i~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          247 MKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhcCChhhCCCHHHHHH
Confidence            99999999999999999875


No 220
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.94  E-value=3.3e-28  Score=207.44  Aligned_cols=154  Identities=12%  Similarity=0.103  Sum_probs=111.6

Q ss_pred             CCCCHHHHHHHHHHHHHhh-ccC-----------CCceeeC-CCCcEEEeecCccccCCCCccc--------ccccc-cc
Q psy323           57 SSFSLTTFSKYVKQISQFV-YMN-----------EELLYPT-QNIEIVITDLEYVRPENDETIC--------REDIH-RQ  114 (255)
Q Consensus        57 ~~l~~~~~~~~~~qll~~l-ylH-----------~niLl~~-~~~~~kl~DfG~a~~~~~~~~~--------~~~~~-~~  114 (255)
                      +.+++..+..++.|++.|| |||           +|||+.. .++.+||+|||+++.+......        ....+ +.
T Consensus       147 ~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~  226 (364)
T 3op5_A          147 KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIE  226 (364)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCC
Confidence            5799999999999999999 998           7999952 5789999999999876542111        22335 89


Q ss_pred             ccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccc
Q psy323          115 YKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLER  194 (255)
Q Consensus       115 y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (255)
                      |+|||++.+..++.++||||+||++|+|++|+.||.+...     +.................                 
T Consensus       227 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~-----~~~~~~~~~~~~~~~~~~-----------------  284 (364)
T 3op5_A          227 FTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK-----DPKYVRDSKIRYRENIAS-----------------  284 (364)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT-----CHHHHHHHHHHHHHCHHH-----------------
T ss_pred             ccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc-----CHHHHHHHHHHhhhhHHH-----------------
Confidence            9999999998999999999999999999999999985331     111111111111110000                 


Q ss_pred             cccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          195 DQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                                      .+... ......+.++.+++.+||..||++||+++++++
T Consensus       285 ----------------~~~~~-~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          285 ----------------LMDKC-FPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             ----------------HHHHH-SCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ----------------HHHHh-cccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                            00000 011245688999999999999999999998874


No 221
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93  E-value=3.3e-28  Score=208.20  Aligned_cols=190  Identities=13%  Similarity=0.224  Sum_probs=128.5

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|+||++   +++++.......+.++++.........   ....+++..+..++.|++.|| |||     
T Consensus       138 ~~E~~il~~l~hpnIv~---~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv  214 (373)
T 3c1x_A          138 LTEGIIMKDFSHPNVLS---LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV  214 (373)
T ss_dssp             HHHHTTSTTCCCTTBCC---CCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhCCCCCcce---EEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            35888999999999999   887754333222344444443222222   224589999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCcc-----cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-C
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETI-----CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-G  145 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g  145 (255)
                            +|||+ +.++.+||+|||+++.......     .....+ +.|+|||++.+..++.++||||+||++|+|++ |
T Consensus       215 HrDlkp~NIll-~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~  293 (373)
T 3c1x_A          215 HRDLAARNCML-DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG  293 (373)
T ss_dssp             CSCCCGGGEEE-CTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             cCccchheEEE-CCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCc
Confidence                  78999 5788999999999987644211     111223 67999999999999999999999999999999 7


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      .+||.+.+..      +....+..  +..                                         ...+..++..
T Consensus       294 ~~p~~~~~~~------~~~~~~~~--~~~-----------------------------------------~~~p~~~~~~  324 (373)
T 3c1x_A          294 APPYPDVNTF------DITVYLLQ--GRR-----------------------------------------LLQPEYCPDP  324 (373)
T ss_dssp             CCSCTTSCSS------CHHHHHHT--TCC-----------------------------------------CCCCTTCCHH
T ss_pred             CCCCCCCCHH------HHHHHHHc--CCC-----------------------------------------CCCCCCCCHH
Confidence            8888754311      11111111  000                                         0022345678


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcC
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      +.+++.+||+.||++|||+.+++++
T Consensus       325 l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          325 LYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            8999999999999999999999864


No 222
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.93  E-value=2.1e-27  Score=197.56  Aligned_cols=202  Identities=15%  Similarity=0.189  Sum_probs=140.0

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc-----ccccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK-----NLTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.......     ......+++..+..++.|++.|| |||   
T Consensus        78 ~~E~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  153 (307)
T 2nru_A           78 DQEIKVMAKCQHENLVE---LLGFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH  153 (307)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECSSSSC-EEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCCCeEE---EEEEEecCCce-EEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            45899999999999999   88877766553 3444443332211     11235699999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCcc---cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETI---CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~---~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~  146 (255)
                              +||++ +.++.+||+|||+++.......   .....+ +.|+|||++.+. ++.++||||+||++++|++|.
T Consensus       154 i~H~dlkp~Nili-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~il~~l~~g~  231 (307)
T 2nru_A          154 HIHRDIKSANILL-DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGL  231 (307)
T ss_dssp             EECSCCCGGGEEE-CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHHHHHHHHHCC
T ss_pred             eecCCCCHHHEEE-cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCC-CCccchhHHHHHHHHHHHHCC
Confidence                    78888 5888999999999987654211   122345 899999998764 789999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+.....      .+..+..........+          ..+...   .   ..             ..+...+..+
T Consensus       232 ~p~~~~~~~~------~~~~~~~~~~~~~~~~----------~~~~~~---~---~~-------------~~~~~~~~~l  276 (307)
T 2nru_A          232 PAVDEHREPQ------LLLDIKEEIEDEEKTI----------EDYIDK---K---MN-------------DADSTSVEAM  276 (307)
T ss_dssp             CSBCTTBSSS------BTTHHHHHHHTTSCCH----------HHHSCS---S---CS-------------CCCHHHHHHH
T ss_pred             CCcccCcchH------HHHHHHHHhhhhhhhh----------hhhccc---c---cc-------------ccchHHHHHH
Confidence            9998654221      1111211111100000          000000   0   00             1234667889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      .+++.+||+.||.+|||+++++++
T Consensus       277 ~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          277 YSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999999999864


No 223
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.93  E-value=8.4e-28  Score=214.77  Aligned_cols=188  Identities=18%  Similarity=0.247  Sum_probs=139.6

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc----ccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL----TRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +.+|+++|+.+.|+||++   +++++....  ++.++++.........    ....+++.++..++.|++.|| |||   
T Consensus       309 ~~~E~~~l~~l~hpniv~---~~~~~~~~~--~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  383 (535)
T 2h8h_A          309 FLQEAQVMKKLRHEKLVQ---LYAVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN  383 (535)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEECSSS--CEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhCCCCCEee---EEEEEeecc--ceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            346999999999999999   887776532  2455555544222211    124599999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCcc--cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETI--CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GD  146 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~--~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~  146 (255)
                              +|||+ +.++.+||+|||+++.......  .....+ ..|+|||++.+..++.++||||+||++|+|++ |+
T Consensus       384 ivHrDlkp~NIll-~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~  462 (535)
T 2h8h_A          384 YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR  462 (535)
T ss_dssp             CCCSCCSGGGEEE-CGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred             eeCCCCCHhhEEE-cCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence                    78999 5788999999999987764211  111223 67999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+..      ..+.+..+......                                           ..+..++.++
T Consensus       463 ~P~~~~~------~~~~~~~i~~~~~~-------------------------------------------~~~~~~~~~l  493 (535)
T 2h8h_A          463 VPYPGMV------NREVLDQVERGYRM-------------------------------------------PCPPECPESL  493 (535)
T ss_dssp             CSSTTCC------HHHHHHHHHTTCCC-------------------------------------------CCCTTCCHHH
T ss_pred             CCCCCCC------HHHHHHHHHcCCCC-------------------------------------------CCCCCCCHHH
Confidence            9998654      22222222111000                                           1223556889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhc
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .+||.+||+.||++|||++++++
T Consensus       494 ~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          494 HDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999999876


No 224
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.93  E-value=2.4e-28  Score=201.61  Aligned_cols=189  Identities=17%  Similarity=0.235  Sum_probs=135.7

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|+||++   +.+++.....  +.++++.........   ..+.+++..+..++.|++.|| |||     
T Consensus        69 ~~e~~~l~~l~h~~i~~---~~~~~~~~~~--~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  143 (291)
T 1u46_A           69 IREVNAMHSLDHRNLIR---LYGVVLTPPM--KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI  143 (291)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECSSSC--EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhCCCCCccc---EEEEEccCCc--eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            35889999999999999   7777766543  233333332211111   125699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCccc----ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETIC----REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GD  146 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~  146 (255)
                            +||++ +.++.+||+|||++.........    ....+ +.|+|||++.+..++.++||||+|+++++|++ |+
T Consensus       144 H~dikp~Nili-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  222 (291)
T 1u46_A          144 HRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ  222 (291)
T ss_dssp             CSCCCGGGEEE-EETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred             cCCCchheEEE-cCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                  78888 47889999999999877553211    11223 67999999998888999999999999999999 99


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+.+      ....+..+......+                                          ..+...+.++
T Consensus       223 ~p~~~~~------~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l  254 (291)
T 1u46_A          223 EPWIGLN------GSQILHKIDKEGERL------------------------------------------PRPEDCPQDI  254 (291)
T ss_dssp             CTTTTCC------HHHHHHHHHTSCCCC------------------------------------------CCCTTCCHHH
T ss_pred             CCcccCC------HHHHHHHHHccCCCC------------------------------------------CCCcCcCHHH
Confidence            9998553      222222221100000                                          0123456889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcC
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      .+++.+||..||++|||+.+++++
T Consensus       255 ~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          255 YNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHccCCcccCcCHHHHHHH
Confidence            999999999999999999999863


No 225
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.93  E-value=2.5e-28  Score=205.15  Aligned_cols=193  Identities=13%  Similarity=0.143  Sum_probs=138.1

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcc---------cccCCCCHHHHHHHHHHHHHhh-cc
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKN---------LTRSSFSLTTFSKYVKQISQFV-YM   77 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~---------~~~~~l~~~~~~~~~~qll~~l-yl   77 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++........         .....+++..++.++.|++.|| ||
T Consensus        81 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L  156 (327)
T 2yfx_A           81 LMEALIISKFNHQNIVR---CIGVSLQSLPR-FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL  156 (327)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECSSSSC-EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhCCCCCCCe---EEEEEcCCCCc-EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHH
Confidence            35889999999999999   88887776553 44444443321111         1124599999999999999999 99


Q ss_pred             C-----------CCceeeC--CCCcEEEeecCccccCCCCcc---cccccc-ccccchhhhhcCCCCCchhHHHHHHHHH
Q psy323           78 N-----------EELLYPT--QNIEIVITDLEYVRPENDETI---CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTF  140 (255)
Q Consensus        78 H-----------~niLl~~--~~~~~kl~DfG~a~~~~~~~~---~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~  140 (255)
                      |           +||++..  .+..+||+|||+++.......   .....+ +.|+|||++.+..++.++||||+||+++
T Consensus       157 H~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  236 (327)
T 2yfx_A          157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW  236 (327)
T ss_dssp             HHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             hhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHH
Confidence            8           6889842  244699999999976533211   112233 7899999999999999999999999999


Q ss_pred             HHhh-CCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCC
Q psy323          141 ELVT-GDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIP  219 (255)
Q Consensus       141 ~l~~-g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
                      +|++ |..||.+..      .......+... ..+                                          ..+
T Consensus       237 ellt~g~~p~~~~~------~~~~~~~~~~~-~~~------------------------------------------~~~  267 (327)
T 2yfx_A          237 EIFSLGYMPYPSKS------NQEVLEFVTSG-GRM------------------------------------------DPP  267 (327)
T ss_dssp             HHHTTSCCSSTTCC------HHHHHHHHHTT-CCC------------------------------------------CCC
T ss_pred             HHHcCCCCCCCCcC------HHHHHHHHhcC-CCC------------------------------------------CCC
Confidence            9998 999997543      22222211110 000                                          022


Q ss_pred             hhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCC
Q psy323          220 KEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWL  253 (255)
Q Consensus       220 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  253 (255)
                      ...+..+.+++.+||+.||.+|||+.++++|.|+
T Consensus       268 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          268 KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            3456788999999999999999999999998653


No 226
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.93  E-value=1.4e-27  Score=199.02  Aligned_cols=192  Identities=17%  Similarity=0.228  Sum_probs=129.6

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc------ccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL------TRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+.. +.++++.........      ....+++..++.++.|++.|| |||  
T Consensus        80 ~~E~~~l~~l~h~~i~~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~  155 (310)
T 2wqm_A           80 IKEIDLLKQLNHPNVIK---YYASFIEDNEL-NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR  155 (310)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEEETTEE-EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCEee---EEEEEEcCCcE-EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            35899999999999999   87777765553 444444443222111      235699999999999999999 998  


Q ss_pred             ---------CCceeeCCCCcEEEeecCccccCCCCcc-cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCC
Q psy323           79 ---------EELLYPTQNIEIVITDLEYVRPENDETI-CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY  147 (255)
Q Consensus        79 ---------~niLl~~~~~~~kl~DfG~a~~~~~~~~-~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~  147 (255)
                               +||++ +.++.+||+|||++........ .....+ +.|+|||++.+..++.++||||+||++++|++|..
T Consensus       156 ~i~H~dl~p~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~  234 (310)
T 2wqm_A          156 RVMHRDIKPANVFI-TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS  234 (310)
T ss_dssp             TCCCCCCCGGGEEE-CTTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CeeCCCCcHHHEEE-cCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                     68888 5888999999999987655322 223345 89999999998899999999999999999999999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLV  227 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (255)
                      ||.+...     +...+.........++                          .               .....+.++.
T Consensus       235 p~~~~~~-----~~~~~~~~~~~~~~~~--------------------------~---------------~~~~~~~~l~  268 (310)
T 2wqm_A          235 PFYGDKM-----NLYSLCKKIEQCDYPP--------------------------L---------------PSDHYSEELR  268 (310)
T ss_dssp             TTC---C-----CHHHHHHHHHTTCSCC--------------------------C---------------CTTTSCHHHH
T ss_pred             CCcccch-----hHHHHHHHhhcccCCC--------------------------C---------------cccccCHHHH
Confidence            9975431     1111111111111100                          0               0123567899


Q ss_pred             HHHHhccccCCCCCCCHHHHhcC
Q psy323          228 RFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       228 ~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      +++.+||..||++|||+++++++
T Consensus       269 ~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          269 QLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCChhhCCCHHHHHHH
Confidence            99999999999999999998863


No 227
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.93  E-value=1.1e-27  Score=218.49  Aligned_cols=187  Identities=17%  Similarity=0.237  Sum_probs=136.8

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      .+|+.+++.+.|+||++   +.+++.....  +.++++.........   ....+++..+..++.|++.|| |||     
T Consensus       439 ~~E~~~l~~l~HpnIv~---l~~~~~~~~~--~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv  513 (656)
T 2j0j_A          439 LQEALTMRQFDHPHIVK---LIGVITENPV--WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV  513 (656)
T ss_dssp             HHHHHHHHHCCCTTBCC---EEEEECSSSC--EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhCCCCCCCe---EEEEEecCce--EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            45899999999999999   8877754332  344444443322221   124699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCccccc--ccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETICRE--DIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GDYM  148 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~--~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~~p  148 (255)
                            +|||+ +.++.+||+|||+++..........  ..+ +.|+|||++.+..++.++||||+||++|+|++ |..|
T Consensus       514 HrDikp~NILl-~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~P  592 (656)
T 2j0j_A          514 HRDIAARNVLV-SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  592 (656)
T ss_dssp             CSCCSGGGEEE-EETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ccccchHhEEE-eCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCC
Confidence                  78999 4788999999999987765322222  223 68999999999899999999999999999997 9999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHH
Q psy323          149 FNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVR  228 (255)
Q Consensus       149 f~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (255)
                      |.+..      ..+.+..+......                                           ..+..++..+.+
T Consensus       593 f~~~~------~~~~~~~i~~~~~~-------------------------------------------~~~~~~~~~l~~  623 (656)
T 2j0j_A          593 FQGVK------NNDVIGRIENGERL-------------------------------------------PMPPNCPPTLYS  623 (656)
T ss_dssp             TTTCC------HHHHHHHHHHTCCC-------------------------------------------CCCTTCCHHHHH
T ss_pred             CCCCC------HHHHHHHHHcCCCC-------------------------------------------CCCccccHHHHH
Confidence            98654      22333322211000                                           122345688999


Q ss_pred             HHHhccccCCCCCCCHHHHhc
Q psy323          229 FLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       229 li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ++.+||..||++|||+.++++
T Consensus       624 li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          624 LMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999875


No 228
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.93  E-value=1.5e-27  Score=197.98  Aligned_cols=202  Identities=15%  Similarity=0.270  Sum_probs=140.5

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhh-hhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKL-LLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+|+.+++.+.|+||++   +.+++...+. .++.++++.........   ....+++..+..++.|++.|| |||    
T Consensus        71 ~~E~~~l~~l~h~~i~~---~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  147 (302)
T 4e5w_A           71 KKEIEILRNLYHENIVK---YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY  147 (302)
T ss_dssp             HHHHHHHHTCCCTTBCC---EEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHhCCCCCeee---eeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCc
Confidence            45999999999999999   8887776532 22444454443222222   235699999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcc----cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETI----CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGD  146 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~----~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~  146 (255)
                             +||++ +.++.+||+|||++........    .....+ ..|+|||++.+..++.++||||+||++++|++|.
T Consensus       148 ~H~dikp~Nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  226 (302)
T 4e5w_A          148 VHRDLAARNVLV-ESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC  226 (302)
T ss_dssp             ECSCCSGGGEEE-EETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             ccCCCchheEEE-cCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHcc
Confidence                   78999 4788999999999987765322    112233 6799999999998899999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHH--hcCCChhhHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAK--SYKIPKEDAK  224 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  224 (255)
                      .|+..           .........+......... ...                        ..+..  ....+...+.
T Consensus       227 ~p~~~-----------~~~~~~~~~~~~~~~~~~~-~~~------------------------~~~~~~~~~~~~~~~~~  270 (302)
T 4e5w_A          227 DSDSS-----------PMALFLKMIGPTHGQMTVT-RLV------------------------NTLKEGKRLPCPPNCPD  270 (302)
T ss_dssp             CGGGS-----------HHHHHHHHHCSCCGGGHHH-HHH------------------------HHHHTTCCCCCCTTCCH
T ss_pred             CCCcc-----------hhhHHhhccCCcccccCHH-HHH------------------------HHHhccCCCCCCCCCCH
Confidence            88752           1222333333322211100 000                        00000  1113345678


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhc
Q psy323          225 QLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       225 ~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ++.+++.+||+.||.+|||+.++++
T Consensus       271 ~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          271 EVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            9999999999999999999999885


No 229
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.93  E-value=5.4e-28  Score=199.40  Aligned_cols=185  Identities=12%  Similarity=0.174  Sum_probs=132.5

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.........   ....+++..+..++.|++.|| |||    
T Consensus        59 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  134 (289)
T 4fvq_A           59 FFEAASMMSKLSHKHLVL---NYGVCVCGDEN-ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTL  134 (289)
T ss_dssp             HHHHHHHHHTSCCTTBCC---EEEEECCTTCC-EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCCCEeE---EEEEEEeCCCC-EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            345899999999999999   88888776553 344455443222111   123499999999999999999 998    


Q ss_pred             -------CCceeeCCCCc--------EEEeecCccccCCCCcccccccc-ccccchhhhhc-CCCCCchhHHHHHHHHHH
Q psy323           79 -------EELLYPTQNIE--------IVITDLEYVRPENDETICREDIH-RQYKAVELIYT-KEFDMKIDIWSTACLTFE  141 (255)
Q Consensus        79 -------~niLl~~~~~~--------~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~-~~~~~~~DiwSlG~il~~  141 (255)
                             +|||+. .++.        +||+|||++......   ....+ +.|+|||++.+ ..++.++||||+||++++
T Consensus       135 vH~Dlkp~NIll~-~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e  210 (289)
T 4fvq_A          135 IHGNVCAKNILLI-REEDRKTGNPPFIKLSDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWE  210 (289)
T ss_dssp             CCCCCCGGGEEEE-ECCBGGGTBCCEEEECCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHH
T ss_pred             ECCCcCcceEEEe-cCCcccccccceeeeccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHH
Confidence                   789995 5444        999999998765442   12234 88999999998 578999999999999999


Q ss_pred             HhhC-CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCCh
Q psy323          142 LVTG-DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPK  220 (255)
Q Consensus       142 l~~g-~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (255)
                      |++| .+|+.+..       ..........  .                                          ...+.
T Consensus       211 l~~g~~~~~~~~~-------~~~~~~~~~~--~------------------------------------------~~~~~  239 (289)
T 4fvq_A          211 ICSGGDKPLSALD-------SQRKLQFYED--R------------------------------------------HQLPA  239 (289)
T ss_dssp             HHTTTCCTTTTSC-------HHHHHHHHHT--T------------------------------------------CCCCC
T ss_pred             HHcCCCCCccccc-------hHHHHHHhhc--c------------------------------------------CCCCC
Confidence            9995 45554322       1111111110  0                                          01222


Q ss_pred             hhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          221 EDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       221 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      ..+.++.+++.+||+.||++|||++++++|
T Consensus       240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          240 PKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             CSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            345677899999999999999999999875


No 230
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.93  E-value=1e-27  Score=198.18  Aligned_cols=188  Identities=12%  Similarity=0.172  Sum_probs=136.1

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCC--CcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQ--HKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++.....  +.++++.....  ......+.+++..+..++.|++.|| |||     
T Consensus        65 ~~~e~~~l~~l~h~~i~~---~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~  139 (291)
T 1xbb_A           65 LLAEANVMQQLDNPYIVR---MIGICEAESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFV  139 (291)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEEESSSE--EEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhCCCCCEEE---EEEEECCCCc--EEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence            345899999999999999   8877743322  33444433221  1112235699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCccc----ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhh-CC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETIC----REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVT-GD  146 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~-g~  146 (255)
                            +||++. .++.+||+|||++.........    ....+ +.|+|||.+.+..++.++||||+|+++++|++ |+
T Consensus       140 H~dikp~Nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  218 (291)
T 1xbb_A          140 HRDLAARNVLLV-TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ  218 (291)
T ss_dssp             CSCCSGGGEEEE-ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCCCcceEEEe-CCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCC
Confidence                  688884 7789999999999877553221    11223 67999999998888999999999999999999 99


Q ss_pred             CCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHH
Q psy323          147 YMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQL  226 (255)
Q Consensus       147 ~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (255)
                      .||.+..      . ..+.........+                                          ..+...+.++
T Consensus       219 ~p~~~~~------~-~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l  249 (291)
T 1xbb_A          219 KPYRGMK------G-SEVTAMLEKGERM------------------------------------------GCPAGCPREM  249 (291)
T ss_dssp             CSSTTCC------H-HHHHHHHHTTCCC------------------------------------------CCCTTCCHHH
T ss_pred             CCCCCCC------H-HHHHHHHHcCCCC------------------------------------------CCCCCCCHHH
Confidence            9998543      1 2221111100000                                          1224566889


Q ss_pred             HHHHHhccccCCCCCCCHHHHhc
Q psy323          227 VRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       227 ~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .+++.+||+.||++|||+.++++
T Consensus       250 ~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          250 YDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999875


No 231
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.93  E-value=3.5e-27  Score=192.47  Aligned_cols=187  Identities=14%  Similarity=0.170  Sum_probs=134.3

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhh-hhhhhhcCCCCCCCCccc----ccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKK-LLLKEILPIQPPHQHKNL----TRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~-~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      +.+|+.+++.+.|+||++   +.+++.... ..++.++++.........    ....+++..+..++.|++.|| |||  
T Consensus        54 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  130 (271)
T 3kmu_A           54 FNEECPRLRIFSHPNVLP---VLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL  130 (271)
T ss_dssp             HHHHGGGGCCCSCTTEEC---EEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHhcCCCchhh---eEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            446899999999999999   888877652 222444444443222111    112599999999999999999 998  


Q ss_pred             -----------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCC---chhHHHHHHHHHHHh
Q psy323           79 -----------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDM---KIDIWSTACLTFELV  143 (255)
Q Consensus        79 -----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~---~~DiwSlG~il~~l~  143 (255)
                                 +||++ +.++.++|+|||++.....    ....+ +.|+|||++.+..++.   ++||||+||++|+|+
T Consensus       131 ~~~i~H~dikp~Nil~-~~~~~~~l~~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~  205 (271)
T 3kmu_A          131 EPLIPRHALNSRSVMI-DEDMTARISMADVKFSFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV  205 (271)
T ss_dssp             SSCCTTCCCSGGGEEE-CTTSCEEEEGGGSCCTTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             CCceecCCCccceEEE-cCCcceeEEeccceeeecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHH
Confidence                       57778 5788999999888755333    23345 8999999999875443   799999999999999


Q ss_pred             hCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhH
Q psy323          144 TGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDA  223 (255)
Q Consensus       144 ~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (255)
                      +|+.||.+..      .......+......+                                          ..+...+
T Consensus       206 ~g~~p~~~~~------~~~~~~~~~~~~~~~------------------------------------------~~~~~~~  237 (271)
T 3kmu_A          206 TREVPFADLS------NMEIGMKVALEGLRP------------------------------------------TIPPGIS  237 (271)
T ss_dssp             HCSCTTTTSC------HHHHHHHHHHSCCCC------------------------------------------CCCTTCC
T ss_pred             hCCCCccccC------hHHHHHHHHhcCCCC------------------------------------------CCCCCCC
Confidence            9999998543      222222221100000                                          1224566


Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          224 KQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       224 ~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .++.+++.+||+.||++|||++++++
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          238 PHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            88999999999999999999999985


No 232
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.93  E-value=3.2e-27  Score=197.77  Aligned_cols=203  Identities=16%  Similarity=0.238  Sum_probs=141.8

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhh-hhhhhcCCCCCCC-CcccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKL-LLKEILPIQPPHQ-HKNLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+++++.+.|+||++   +.+++...+. .++.++++..... ........+++..++.++.|++.|| |||     
T Consensus        80 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~iv  156 (318)
T 3lxp_A           80 WKQEIDILRTLYHEHIIK---YKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYI  156 (318)
T ss_dssp             HHHHHHHHHHCCCTTBCC---EEEEEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhCCCcchhh---EEEEEecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            346999999999999999   8888876532 2345555554432 2233345699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCccc----ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDETIC----REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY  147 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~  147 (255)
                            +||++ +.++.+||+|||++.........    ....+ +.|+|||++.+..++.++||||+||++++|++|..
T Consensus       157 H~Dikp~Nil~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~  235 (318)
T 3lxp_A          157 HRDLAARNVLL-DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD  235 (318)
T ss_dssp             CSCCSGGGEEE-CTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCCCchheEEE-cCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                  78999 57889999999999887653221    12223 67999999999888999999999999999999999


Q ss_pred             CCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHH--hcCCChhhHHH
Q psy323          148 MFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAK--SYKIPKEDAKQ  225 (255)
Q Consensus       148 pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  225 (255)
                      ||....        .   ......+....... .....                        +.+..  ....+..++.+
T Consensus       236 p~~~~~--------~---~~~~~~~~~~~~~~-~~~~~------------------------~~~~~~~~~~~~~~~~~~  279 (318)
T 3lxp_A          236 SSQSPP--------T---KFLELIGIAQGQMT-VLRLT------------------------ELLERGERLPRPDKCPAE  279 (318)
T ss_dssp             GGGSHH--------H---HHHHHHCSCCHHHH-HHHHH------------------------HHHHTTCCCCCCTTCCHH
T ss_pred             cccccc--------h---hhhhhhcccccchh-HHHHH------------------------HHHhcccCCCCCccccHH
Confidence            996321        1   11111111111100 00000                        00000  01133456789


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhc
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      +.+|+.+||+.||++|||++++++
T Consensus       280 l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          280 VYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHH
Confidence            999999999999999999999985


No 233
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.93  E-value=3e-27  Score=195.90  Aligned_cols=198  Identities=15%  Similarity=0.174  Sum_probs=133.3

Q ss_pred             hhHHHhh--hhhhHHHHHHHHHHHHhhh---hhhhhhhcCCCCCCCC-cccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323           10 DVKVMEN--MFVDAIIARIWIKAVMKKK---KLLLKEILPIQPPHQH-KNLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus        10 e~~~l~~--~~h~~iv~~~~l~~~~~~~---~~~~~~~~~~~~~l~~-~~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      |.+++..  +.|+||++   +.+++...   ...++.++++...... ..+....+++..+..++.|++.|| |||    
T Consensus        50 e~~~~~~~~l~h~niv~---~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~  126 (301)
T 3q4u_A           50 ETELYNTVMLRHENILG---FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF  126 (301)
T ss_dssp             HHHHHHHTCCCCTTBCC---EEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBC
T ss_pred             HHHHHHHhhccCcCeee---EEEeeccccCCCceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhh
Confidence            6666666  78999998   76654332   1123455555544322 223346799999999999999999 988    


Q ss_pred             ---------------CCceeeCCCCcEEEeecCccccCCCCcc-----cccccc-ccccchhhhhcC------CCCCchh
Q psy323           79 ---------------EELLYPTQNIEIVITDLEYVRPENDETI-----CREDIH-RQYKAVELIYTK------EFDMKID  131 (255)
Q Consensus        79 ---------------~niLl~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~-~~y~aPE~l~~~------~~~~~~D  131 (255)
                                     +|||+ +.++.+||+|||+|+.......     .....+ +.|+|||++.+.      .++.++|
T Consensus       127 ~~~~~~~ivH~Dlkp~Nill-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (301)
T 3q4u_A          127 GTQGKPAIAHRDLKSKNILV-KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVD  205 (301)
T ss_dssp             STTCBCEEECSCCCGGGEEE-CTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHH
T ss_pred             hccCCCCeecCCCChHhEEE-cCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhh
Confidence                           47888 5788999999999976654221     122356 999999999887      3346899


Q ss_pred             HHHHHHHHHHHhhC----------CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhcccccccccccccccc
Q psy323          132 IWSTACLTFELVTG----------DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITS  201 (255)
Q Consensus       132 iwSlG~il~~l~~g----------~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (255)
                      |||+||++|+|++|          ..||.+......  ....+.......+..+                         .
T Consensus       206 vwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~--~~~~~~~~~~~~~~~~-------------------------~  258 (301)
T 3q4u_A          206 IWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP--SFEDMRKVVCVDQQRP-------------------------N  258 (301)
T ss_dssp             HHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC--CHHHHHHHHTTSCCCC-------------------------C
T ss_pred             HHHHHHHHHHHHhhhcCccccccccccccccCCCCc--chhhhhHHHhccCCCC-------------------------C
Confidence            99999999999999          888865432211  1122222111111100                         0


Q ss_pred             CCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          202 MNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .+..+           .+...+.++.+++.+||+.||++|||+.++++
T Consensus       259 ~~~~~-----------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          259 IPNRW-----------FSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             CCGGG-----------GGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CChhh-----------ccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            00000           11346789999999999999999999999985


No 234
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.93  E-value=2.7e-26  Score=193.43  Aligned_cols=190  Identities=14%  Similarity=0.109  Sum_probs=134.8

Q ss_pred             CCchhHHHhhhh--------------------------hhHHHHHHHHHHHHhh-------------hhhhhhhhcCCCC
Q psy323            7 VNPDVKVMENMF--------------------------VDAIIARIWIKAVMKK-------------KKLLLKEILPIQP   47 (255)
Q Consensus         7 ~~~e~~~l~~~~--------------------------h~~iv~~~~l~~~~~~-------------~~~~~~~~~~~~~   47 (255)
                      +.+|+.+++.+.                          |+||++   +.+++..             .+. ++.++++..
T Consensus        70 ~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~---~~~~~~~~~~~~~~~~~~~~~~~-~~lv~E~~~  145 (336)
T 2vuw_A           70 ILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLK---AWDHYNSTKGSANDRPDFFKDDQ-LFIVLEFEF  145 (336)
T ss_dssp             HHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHH---HHHHHHHHTCCSSCCSCCCCTTC-EEEEEEEEC
T ss_pred             HHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHH---HHHHHhhhccccccCccccccCe-EEEEEEecC
Confidence            346899999998                          899999   9999987             333 355555533


Q ss_pred             CC-CCcccccCCCCHHHHHHHHHHHHHhh-ccC------------CCceeeCCCC--------------------cEEEe
Q psy323           48 PH-QHKNLTRSSFSLTTFSKYVKQISQFV-YMN------------EELLYPTQNI--------------------EIVIT   93 (255)
Q Consensus        48 ~l-~~~~~~~~~l~~~~~~~~~~qll~~l-ylH------------~niLl~~~~~--------------------~~kl~   93 (255)
                      .. ....+..+.+++..++.++.|++.|| |||            +|||+. .++                    .+||+
T Consensus       146 ~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~-~~~~~~~~~~~~~~~~~~~~~~~~vkL~  224 (336)
T 2vuw_A          146 GGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLK-KTSLKKLHYTLNGKSSTIPSCGLQVSII  224 (336)
T ss_dssp             CCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEE-ECSCSEEEEEETTEEEEEECTTEEEEEC
T ss_pred             CCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEe-ccCCcceeeeccCccccccCCCceEEEe
Confidence            32 23333456799999999999999999 998            689995 544                    89999


Q ss_pred             ecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHH-HHHHhhCCCCCCCCCCCCCCcc-HHHHHHHHHH
Q psy323           94 DLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACL-TFELVTGDYMFNPFESKYYTID-EHHILKIIQL  170 (255)
Q Consensus        94 DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~i-l~~l~~g~~pf~~~~~~~~~~~-~~~l~~i~~~  170 (255)
                      |||+|+.....    ..++ +.|+|||++.+.. +.++||||++++ .+++++|..||.+..      . ......+...
T Consensus       225 DFG~a~~~~~~----~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~------~~~~~~~~~~~~  293 (336)
T 2vuw_A          225 DYTLSRLERDG----IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL------WLHYLTDKMLKQ  293 (336)
T ss_dssp             CCTTCBEEETT----EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH------HHHHHHHHHHHT
T ss_pred             eccccEecCCC----cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh------hhhHHHHhhhhh
Confidence            99999876542    2356 9999999998776 889999998777 677888999885110      0 0011111111


Q ss_pred             hcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHh-c
Q psy323          171 MAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCL-Q  249 (255)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l-~  249 (255)
                      .....                          ... ..          .+...++++.+||.+||++|     |++|++ +
T Consensus       294 ~~~~~--------------------------~~~-~~----------~~~~~s~~~~dli~~~L~~d-----sa~e~l~~  331 (336)
T 2vuw_A          294 MTFKT--------------------------KCN-TP----------AMKQIKRKIQEFHRTMLNFS-----SATDLLCQ  331 (336)
T ss_dssp             CCCSS--------------------------CCC-SH----------HHHHHHHHHHHHHHHGGGSS-----SHHHHHHH
T ss_pred             hccCc--------------------------ccc-hh----------hhhhcCHHHHHHHHHHhccC-----CHHHHHhc
Confidence            00000                          000 00          11356889999999999987     999999 9


Q ss_pred             CcCCC
Q psy323          250 NEWLI  254 (255)
Q Consensus       250 hp~~~  254 (255)
                      ||||+
T Consensus       332 Hp~f~  336 (336)
T 2vuw_A          332 HSLFK  336 (336)
T ss_dssp             CGGGC
T ss_pred             CCCcC
Confidence            99996


No 235
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.93  E-value=9.6e-27  Score=205.07  Aligned_cols=198  Identities=11%  Similarity=0.090  Sum_probs=135.1

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc--ccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL--TRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +..|.++++.+.|.+.+.   .+..+...+...+.++++........+  ....+++..+..++.||+.|| |||     
T Consensus        49 ~~~E~~il~~L~~~~~i~---~i~~~~~~~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIv  125 (483)
T 3sv0_A           49 LLYESKIYRILQGGTGIP---NVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL  125 (483)
T ss_dssp             HHHHHHHHHHTTTSTTCC---CEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHhcCCCCCC---eEEEEEeeCCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            345888899888866554   333333333322344444422111111  245799999999999999999 998     


Q ss_pred             ------CCceee--CCCCcEEEeecCccccCCCCccc--------ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHH
Q psy323           79 ------EELLYP--TQNIEIVITDLEYVRPENDETIC--------REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFE  141 (255)
Q Consensus        79 ------~niLl~--~~~~~~kl~DfG~a~~~~~~~~~--------~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~  141 (255)
                            +|||+.  +.++.+||+|||+++........        ....+ +.|+|||++.+..++.++||||+||++|+
T Consensus       126 HrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~e  205 (483)
T 3sv0_A          126 HRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMY  205 (483)
T ss_dssp             CCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHH
Confidence                  799995  35789999999999876553211        13345 89999999999999999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChh
Q psy323          142 LVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKE  221 (255)
Q Consensus       142 l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
                      |++|+.||.+.....   ....+..+....-..+..                                 .      ....
T Consensus       206 lltG~~Pf~~~~~~~---~~~~~~~i~~~~~~~~~~---------------------------------~------l~~~  243 (483)
T 3sv0_A          206 FLRGSLPWQGLKAGT---KKQKYEKISEKKVATSIE---------------------------------A------LCRG  243 (483)
T ss_dssp             HHHSSCTTSSCCCSS---HHHHHHHHHHHHHHSCHH---------------------------------H------HHTT
T ss_pred             HHhCCCCCccccchh---HHHHHHHHhhccccccHH---------------------------------H------HhcC
Confidence            999999998654321   112222221111000000                                 0      0123


Q ss_pred             hHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          222 DAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       222 ~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ++.++.+|+.+||+.||++||+++++++
T Consensus       244 ~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          244 YPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             SCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             CcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            4678999999999999999999988765


No 236
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.93  E-value=8.3e-27  Score=202.09  Aligned_cols=141  Identities=12%  Similarity=0.105  Sum_probs=110.4

Q ss_pred             CCCCHHHHHHHHHHHHHhh-ccC-----------CCceeeCCCCcEEEeecCccccCCCCccccccccccccchhhh---
Q psy323           57 SSFSLTTFSKYVKQISQFV-YMN-----------EELLYPTQNIEIVITDLEYVRPENDETICREDIHRQYKAVELI---  121 (255)
Q Consensus        57 ~~l~~~~~~~~~~qll~~l-ylH-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~y~aPE~l---  121 (255)
                      +.+++..+..++.|++.|| |||           +|||+ +.++.+||+|||+++.....  ....+++.|+|||++   
T Consensus       206 ~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl-~~~~~~kL~DFG~a~~~~~~--~~~~~g~~y~aPE~~~~~  282 (413)
T 3dzo_A          206 KSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL-DQRGGVFLTGFEHLVRDGAS--AVSPIGRGFAPPETTAER  282 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE-CTTCCEEECCGGGCEETTEE--ECCCCCTTTCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEE-ecCCeEEEEeccceeecCCc--cccCCCCceeCchhhhcc
Confidence            4577889999999999999 998           79999 58889999999999876652  233333999999999   


Q ss_pred             -------hcCCCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccc
Q psy323          122 -------YTKEFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLER  194 (255)
Q Consensus       122 -------~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (255)
                             .+..++.++||||+||++|+|++|+.||.+.+....      .                        ...+. 
T Consensus       283 ~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~------~------------------------~~~~~-  331 (413)
T 3dzo_A          283 MLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG------S------------------------EWIFR-  331 (413)
T ss_dssp             TSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC------S------------------------GGGGS-
T ss_pred             ccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhh------H------------------------HHHHh-
Confidence                   333678899999999999999999999975431100      0                        00000 


Q ss_pred             cccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcCcCCC
Q psy323          195 DQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQNEWLI  254 (255)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  254 (255)
                                             .....+.++.+||.+||+.||++|||+.++++||||+
T Consensus       332 -----------------------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~  368 (413)
T 3dzo_A          332 -----------------------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE  368 (413)
T ss_dssp             -----------------------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             -----------------------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHH
Confidence                                   0013457889999999999999999999999999985


No 237
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.93  E-value=3.3e-27  Score=196.92  Aligned_cols=191  Identities=14%  Similarity=0.140  Sum_probs=128.9

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC-----
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN-----   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH-----   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+.. +.++++.......  ....+.+++..+..++.|++.|| |||     
T Consensus        81 ~~~e~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~  156 (309)
T 2h34_A           81 MQREARTAGRLQEPHVVP---IHDFGEIDGQL-YVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGAT  156 (309)
T ss_dssp             HHHHHHHHTTCCCTTBCC---EEEEEEETTEE-EEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhhcCCCCeeE---EEEEEeeCCeE-EEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCC
Confidence            346899999999999999   88877766553 4445554432211  11235699999999999999999 998     


Q ss_pred             ------CCceeeCCCCcEEEeecCccccCCCCc--ccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCC
Q psy323           79 ------EELLYPTQNIEIVITDLEYVRPENDET--ICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMF  149 (255)
Q Consensus        79 ------~niLl~~~~~~~kl~DfG~a~~~~~~~--~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf  149 (255)
                            +||++ +.++.+||+|||++.......  ......+ +.|+|||++.+..++.++||||+|+++++|++|+.||
T Consensus       157 H~dlkp~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  235 (309)
T 2h34_A          157 HRDVKPENILV-SADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPY  235 (309)
T ss_dssp             CSCCCGGGEEE-CTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSS
T ss_pred             cCCCChHHEEE-cCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCC
Confidence                  68888 578899999999998765421  2223445 8999999999888999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHH
Q psy323          150 NPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRF  229 (255)
Q Consensus       150 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  229 (255)
                      .+..       ...+.....  ...+..                      .                ..+...+.++.++
T Consensus       236 ~~~~-------~~~~~~~~~--~~~~~~----------------------~----------------~~~~~~~~~l~~l  268 (309)
T 2h34_A          236 QGDQ-------LSVMGAHIN--QAIPRP----------------------S----------------TVRPGIPVAFDAV  268 (309)
T ss_dssp             CSCH-------HHHHHHHHH--SCCCCG----------------------G----------------GTSTTCCTHHHHH
T ss_pred             CCch-------HHHHHHHhc--cCCCCc----------------------c----------------ccCCCCCHHHHHH
Confidence            7532       122211111  111000                      0                0123456788999


Q ss_pred             HHhccccCCCCCC-CHHHHhc
Q psy323          230 LIPMLRLNPNKRE-TAEQCLQ  249 (255)
Q Consensus       230 i~~~L~~dP~~R~-t~~e~l~  249 (255)
                      +.+||+.||++|| |++++++
T Consensus       269 i~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          269 IARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHhccCCHHHHHHhHHHHHH
Confidence            9999999999999 7887764


No 238
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.92  E-value=7.8e-27  Score=195.04  Aligned_cols=191  Identities=14%  Similarity=0.177  Sum_probs=133.0

Q ss_pred             CCCCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC--
Q psy323            5 APVNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN--   78 (255)
Q Consensus         5 ~~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH--   78 (255)
                      +.+.+|+.+++.+.|+||++   +.+++...+.. +.++++.........   ....+++..+..++.|++.|| |||  
T Consensus        74 ~~~~~e~~~l~~l~h~~iv~---~~~~~~~~~~~-~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~  149 (319)
T 2y4i_B           74 KAFKREVMAYRQTRHENVVL---FMGACMSPPHL-AIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK  149 (319)
T ss_dssp             CCCCTTGGGGTTCCCTTBCC---CCEEEECSSCE-EEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCCCCEeE---EEEEEecCCce-EEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            44667999999999999999   88887776653 444454433211111   123699999999999999999 998  


Q ss_pred             ---------CCceeeCCCCcEEEeecCccccCCCC------cccccccc-ccccchhhhhc---------CCCCCchhHH
Q psy323           79 ---------EELLYPTQNIEIVITDLEYVRPENDE------TICREDIH-RQYKAVELIYT---------KEFDMKIDIW  133 (255)
Q Consensus        79 ---------~niLl~~~~~~~kl~DfG~a~~~~~~------~~~~~~~~-~~y~aPE~l~~---------~~~~~~~Diw  133 (255)
                               +||++.  ++.+||+|||+++.....      .......+ +.|+|||++.+         ..++.++|||
T Consensus       150 ~i~H~dlkp~NIl~~--~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~  227 (319)
T 2y4i_B          150 GILHKDLKSKNVFYD--NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVF  227 (319)
T ss_dssp             TCCCCCCCSTTEEEC----CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHH
T ss_pred             CccccCCChhhEEEe--CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHH
Confidence                     789993  679999999998765321      11222335 88999999985         2578899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHH
Q psy323          134 STACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILA  213 (255)
Q Consensus       134 SlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (255)
                      |+||++++|++|..||.+..      .......+..  +..+                         ..           
T Consensus       228 slG~il~el~~g~~p~~~~~------~~~~~~~~~~--~~~~-------------------------~~-----------  263 (319)
T 2y4i_B          228 ALGTIWYELHAREWPFKTQP------AEAIIWQMGT--GMKP-------------------------NL-----------  263 (319)
T ss_dssp             HHHHHHHHHHHSSCSSSSCC------HHHHHHHHHT--TCCC-------------------------CC-----------
T ss_pred             HHHHHHHHHHhCCCCCCCCC------HHHHHHHhcc--CCCC-------------------------CC-----------
Confidence            99999999999999997543      2222111111  0000                         00           


Q ss_pred             HhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          214 KSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       214 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                          .+...+.++.+++.+||..||++|||+.++++
T Consensus       264 ----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          264 ----SQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             ----CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             ----CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                01134567889999999999999999999886


No 239
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92  E-value=1.4e-26  Score=194.83  Aligned_cols=199  Identities=14%  Similarity=0.124  Sum_probs=131.0

Q ss_pred             hhHHHhhh--hhhHHHHHHHHHHHHhhhh---hhhhhhcCCCCCCC-CcccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323           10 DVKVMENM--FVDAIIARIWIKAVMKKKK---LLLKEILPIQPPHQ-HKNLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus        10 e~~~l~~~--~h~~iv~~~~l~~~~~~~~---~~~~~~~~~~~~l~-~~~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      |.+++...  .|+||++   +.+++....   ..++.++++..... ...+....+++..+..++.|++.|| |||    
T Consensus        79 e~~~~~~~~~~h~~i~~---~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~  155 (337)
T 3mdy_A           79 ETEIYQTVLMRHENILG---FIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIF  155 (337)
T ss_dssp             HHHHHTSTTCCCTTBCC---EEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBC
T ss_pred             HHHHHHHHhhcCCCeee---EEEEEccCCCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence            45555554  8999998   777666542   12355566654432 2223345799999999999999999 987    


Q ss_pred             ---------------CCceeeCCCCcEEEeecCccccCCCCccc-----ccccc-ccccchhhhhcCCCCCc------hh
Q psy323           79 ---------------EELLYPTQNIEIVITDLEYVRPENDETIC-----REDIH-RQYKAVELIYTKEFDMK------ID  131 (255)
Q Consensus        79 ---------------~niLl~~~~~~~kl~DfG~a~~~~~~~~~-----~~~~~-~~y~aPE~l~~~~~~~~------~D  131 (255)
                                     +|||+ +.++.+||+|||+++........     ....+ +.|+|||++.+..+...      +|
T Consensus       156 ~~~~~~~ivH~Dikp~Nill-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  234 (337)
T 3mdy_A          156 STQGKPAIAHRDLKSKNILV-KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMAD  234 (337)
T ss_dssp             STTCBCCEECSCCCGGGEEE-CTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHH
T ss_pred             hhccCCCEEecccchHHEEE-CCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccc
Confidence                           46777 57889999999999876542211     23356 99999999988766554      99


Q ss_pred             HHHHHHHHHHHhhC----------CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhcccccccccccccccc
Q psy323          132 IWSTACLTFELVTG----------DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITS  201 (255)
Q Consensus       132 iwSlG~il~~l~~g----------~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (255)
                      |||+||++|+|++|          +.||.+......  ....+......-+..                         ..
T Consensus       235 iwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~-------------------------~~  287 (337)
T 3mdy_A          235 MYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP--SYEDMREIVCIKKLR-------------------------PS  287 (337)
T ss_dssp             HHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC--CHHHHHHHHTTSCCC-------------------------CC
T ss_pred             hHHHHHHHHHHHhccCcccccccccccHhhhcCCCC--chhhhHHHHhhhccC-------------------------cc
Confidence            99999999999999          556653322111  111111111100000                         00


Q ss_pred             CCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          202 MNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      .+..+           .+..++.++.+++.+||+.||++|||+.++++|
T Consensus       288 ~~~~~-----------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          288 FPNRW-----------SSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             CCGGG-----------GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ccccc-----------hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            00000           113567889999999999999999999999875


No 240
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.92  E-value=2.8e-27  Score=198.75  Aligned_cols=201  Identities=14%  Similarity=0.221  Sum_probs=137.9

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhh-hhhhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKK-KLLLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~-~~~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +.+|+++++.+.|+||+.   +.+++... ...++.++++.........   ....+++..+..++.|++.|| |||   
T Consensus        71 ~~~E~~~l~~l~h~~i~~---~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  147 (327)
T 3lxl_A           71 FQREIQILKALHSDFIVK---YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR  147 (327)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCCCceeE---EEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456999999999999999   77766432 2222444444433222211   134699999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCcc----cccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETI----CREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~----~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g  145 (255)
                              +||++ +.++.+||+|||+++.......    .....+ +.|+|||++.+..++.++||||+||++++|++|
T Consensus       148 ivH~Dikp~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g  226 (327)
T 3lxl_A          148 CVHRDLAARNILV-ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY  226 (327)
T ss_dssp             EECSCCSGGGEEE-EETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCCChhhEEE-CCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhC
Confidence                    78999 4788999999999987754321    112223 679999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcC---CChhhhhhhhhhccccccccccccccccCCCCccHHHHHHH--hcCCCh
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAE---IPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAK--SYKIPK  220 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  220 (255)
                      ..||.+..        ..   .......   .+...                            ...+....  ....+.
T Consensus       227 ~~p~~~~~--------~~---~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~  267 (327)
T 3lxl_A          227 CDKSCSPS--------AE---FLRMMGCERDVPALS----------------------------RLLELLEEGQRLPAPP  267 (327)
T ss_dssp             TCGGGSHH--------HH---HHHHCC----CCHHH----------------------------HHHHHHHTTCCCCCCT
T ss_pred             CCCCcccc--------ch---hhhhcccccccccHH----------------------------HHHHHhhcccCCCCCC
Confidence            99996321        11   1111100   00000                            00000000  011334


Q ss_pred             hhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          221 EDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       221 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      .++.++.+++.+||+.||++|||+++++++
T Consensus       268 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          268 ACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            567899999999999999999999999764


No 241
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.92  E-value=2.8e-27  Score=198.92  Aligned_cols=187  Identities=16%  Similarity=0.169  Sum_probs=117.3

Q ss_pred             CchhHHHhhhh-hhHHHHHHHHHHHHh-------hhhhhhhhhcCCCCCCCCc----ccccCCCCHHHHHHHHHHHHHhh
Q psy323            8 NPDVKVMENMF-VDAIIARIWIKAVMK-------KKKLLLKEILPIQPPHQHK----NLTRSSFSLTTFSKYVKQISQFV   75 (255)
Q Consensus         8 ~~e~~~l~~~~-h~~iv~~~~l~~~~~-------~~~~~~~~~~~~~~~l~~~----~~~~~~l~~~~~~~~~~qll~~l   75 (255)
                      .+|+.+++.+. |+||++   +++++.       .....++.++++.......    ....+.+++..++.++.|++.||
T Consensus        73 ~~e~~~l~~l~~h~~iv~---~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l  149 (337)
T 3ll6_A           73 IQEVCFMKKLSGHPNIVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV  149 (337)
T ss_dssp             HHHHHHHHHHTTSTTBCC---EEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCChhh---ccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            45888999996 999998   766652       1111123333433321111    11235699999999999999999


Q ss_pred             -ccC-------------CCceeeCCCCcEEEeecCccccCCCCcccc-------------cccc-ccccchhhh---hcC
Q psy323           76 -YMN-------------EELLYPTQNIEIVITDLEYVRPENDETICR-------------EDIH-RQYKAVELI---YTK  124 (255)
Q Consensus        76 -ylH-------------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~-------------~~~~-~~y~aPE~l---~~~  124 (255)
                       |||             +|||+ +.++.+||+|||+++.........             ...+ +.|+|||++   .+.
T Consensus       150 ~~LH~~~~~ivH~Dikp~NIl~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  228 (337)
T 3ll6_A          150 QHMHRQKPPIIHRDLKVENLLL-SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNF  228 (337)
T ss_dssp             HHHHTSSSCCBCCCCCGGGCEE-CTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTS
T ss_pred             HHHHhCCCCEEEccCCcccEEE-CCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccC
Confidence             998             47788 578899999999998776532111             2335 889999999   455


Q ss_pred             CCCCchhHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCC
Q psy323          125 EFDMKIDIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNA  204 (255)
Q Consensus       125 ~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (255)
                      .++.++||||+||++++|++|+.||.+...         ...+......+                              
T Consensus       229 ~~~~~~Dv~slG~il~el~~g~~p~~~~~~---------~~~~~~~~~~~------------------------------  269 (337)
T 3ll6_A          229 PIGEKQDIWALGCILYLLCFRQHPFEDGAK---------LRIVNGKYSIP------------------------------  269 (337)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHSSCCC---------------------CCCC------------------------------
T ss_pred             CCChHHhHHHHHHHHHHHHhCCCCCcchhH---------HHhhcCcccCC------------------------------
Confidence            788999999999999999999999974320         00000000000                              


Q ss_pred             CccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          205 KDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                                   .+...+..+.+|+.+||+.||++|||+.++++|
T Consensus       270 -------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          270 -------------PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             -------------TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             -------------cccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                         011233567899999999999999999999976


No 242
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.92  E-value=1.1e-26  Score=195.10  Aligned_cols=204  Identities=15%  Similarity=0.191  Sum_probs=138.4

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhh-hhhhhcCCCCCCCCccc---ccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKL-LLKEILPIQPPHQHKNL---TRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~---~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +.+|+.+++.+.|+||++   +.+++...+. .++.++++.........   ....+++..+..++.|++.|| |||   
T Consensus        89 ~~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  165 (326)
T 2w1i_A           89 FEREIEILKSLQHDNIVK---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR  165 (326)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhCCCCCeee---EEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            346999999999999998   7776654432 23445555443222211   124599999999999999999 998   


Q ss_pred             --------CCceeeCCCCcEEEeecCccccCCCCccc----ccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhC
Q psy323           79 --------EELLYPTQNIEIVITDLEYVRPENDETIC----REDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 --------~niLl~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g  145 (255)
                              +||++ +.++.+||+|||+++........    ....+ ..|+|||++.+..++.++||||+||++++|++|
T Consensus       166 ivH~dikp~NIli-~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg  244 (326)
T 2w1i_A          166 YIHRDLATRNILV-ENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY  244 (326)
T ss_dssp             EECSCCCGGGEEE-EETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHT
T ss_pred             EeccCCCcceEEE-cCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhc
Confidence                    78898 47889999999999887653221    11223 679999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHH--hcCCChhhH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAK--SYKIPKEDA  223 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  223 (255)
                      ..|+...           .....+..+..+.........                        .+.+..  ....+..++
T Consensus       245 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~  289 (326)
T 2w1i_A          245 IEKSKSP-----------PAEFMRMIGNDKQGQMIVFHL------------------------IELLKNNGRLPRPDGCP  289 (326)
T ss_dssp             TCGGGSH-----------HHHHHHHHCTTCCTHHHHHHH------------------------HHHHHTTCCCCCCTTCC
T ss_pred             CCCCCCC-----------HHHHHHhhccccchhhhHHHH------------------------HHHhhcCCCCCCCCccc
Confidence            9888621           111222222221110000000                        000000  011334567


Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          224 KQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       224 ~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      .++.+++.+||+.||++|||+.++++
T Consensus       290 ~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          290 DEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            88999999999999999999999875


No 243
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.92  E-value=1.3e-26  Score=195.56  Aligned_cols=200  Identities=13%  Similarity=0.123  Sum_probs=135.6

Q ss_pred             chhHHHhh--hhhhHHHHHHHHHHHHhhhhh---hhhhhcCCCCCCC-CcccccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            9 PDVKVMEN--MFVDAIIARIWIKAVMKKKKL---LLKEILPIQPPHQ-HKNLTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         9 ~e~~~l~~--~~h~~iv~~~~l~~~~~~~~~---~~~~~~~~~~~l~-~~~~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +|.++++.  +.|+||++   +.+++.....   .++.++++..... ...+....+++..++.++.|++.|| |||   
T Consensus        83 ~e~~~~~~~~l~h~ni~~---~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~  159 (342)
T 1b6c_B           83 REAEIYQTVMLRHENILG---FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEI  159 (342)
T ss_dssp             HHHHHHHHSCCCCTTBCC---EEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCB
T ss_pred             HHHHHHHHhhcCCCcEEE---EEeeecccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            47788877  78999999   7777766541   2355556554422 2223345799999999999999999 988   


Q ss_pred             ----------------CCceeeCCCCcEEEeecCccccCCCCcc-----cccccc-ccccchhhhhcCC------CCCch
Q psy323           79 ----------------EELLYPTQNIEIVITDLEYVRPENDETI-----CREDIH-RQYKAVELIYTKE------FDMKI  130 (255)
Q Consensus        79 ----------------~niLl~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~-~~y~aPE~l~~~~------~~~~~  130 (255)
                                      +||++ +.++.+||+|||+++.......     .....+ +.|+|||++.+..      ++.++
T Consensus       160 ~~~~~~~~ivH~Dlkp~NIll-~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  238 (342)
T 1b6c_B          160 VGTQGKPAIAHRDLKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA  238 (342)
T ss_dssp             CSTTCBCEEECSCCSGGGEEE-CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHH
T ss_pred             hhhcccCCeeeCCCCHHHEEE-CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcc
Confidence                            37788 5788999999999987654321     233345 8999999998762      22689


Q ss_pred             hHHHHHHHHHHHhhC----------CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccc
Q psy323          131 DIWSTACLTFELVTG----------DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNIT  200 (255)
Q Consensus       131 DiwSlG~il~~l~~g----------~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (255)
                      ||||+||++|+|++|          ..||.+......  ....+......-...+                         
T Consensus       239 Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~-------------------------  291 (342)
T 1b6c_B          239 DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP--SVEEMRKVVCEQKLRP-------------------------  291 (342)
T ss_dssp             HHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC--CHHHHHHHHTTSCCCC-------------------------
T ss_pred             cHHHHHHHHHHHHhccCcCCcccccccCccccCcCcc--cHHHHHHHHHHHHhCC-------------------------
Confidence            999999999999999          677764332111  1112211110000000                         


Q ss_pred             cCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          201 SMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                      .++..+           ........+.+++.+||+.||++|||++++++|
T Consensus       292 ~~~~~~-----------~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          292 NIPNRW-----------QSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CCCGGG-----------GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             CCcccc-----------cchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            000000           013456789999999999999999999999875


No 244
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.91  E-value=5.4e-27  Score=194.66  Aligned_cols=181  Identities=18%  Similarity=0.308  Sum_probs=123.5

Q ss_pred             chhHHH-hhhhhhHHHHHHHHHHHHhh----hhhhhhhhcCCCCCCCCccc----ccCCCCHHHHHHHHHHHHHhh-ccC
Q psy323            9 PDVKVM-ENMFVDAIIARIWIKAVMKK----KKLLLKEILPIQPPHQHKNL----TRSSFSLTTFSKYVKQISQFV-YMN   78 (255)
Q Consensus         9 ~e~~~l-~~~~h~~iv~~~~l~~~~~~----~~~~~~~~~~~~~~l~~~~~----~~~~l~~~~~~~~~~qll~~l-ylH   78 (255)
                      +|+.++ +...|+||++   +.+++..    .+. ++.++++.........    ....+++..++.++.|++.|| |||
T Consensus        59 ~e~~~~~~~~~h~~i~~---~~~~~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH  134 (299)
T 3m2w_A           59 REVELHWRASQCPHIVR---IVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  134 (299)
T ss_dssp             HHHHHHHHHTTSTTBCC---EEEEEEEEETTEEE-EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCchh---HHhhhhhhcCCCce-EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            477777 6669999999   8887765    333 3555555544322211    123699999999999999999 998


Q ss_pred             -----------CCceeeCC--CCcEEEeecCccccCCCCccccccccccccchhhhhcCCCCCchhHHHHHHHHHHHhhC
Q psy323           79 -----------EELLYPTQ--NIEIVITDLEYVRPENDETICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTG  145 (255)
Q Consensus        79 -----------~niLl~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g  145 (255)
                                 +||++...  ++.+||+|||++.....                    ..++.++||||+||++|+|++|
T Consensus       135 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~--------------------~~~~~~~DiwslG~il~el~tg  194 (299)
T 3m2w_A          135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG--------------------EKYDKSCDMWSLGVIMYILLCG  194 (299)
T ss_dssp             HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT--------------------CGGGGHHHHHHHHHHHHHHHHS
T ss_pred             hCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc--------------------ccCCchhhHHHHHHHHHHHHHC
Confidence                       78999532  67899999999865433                    2367899999999999999999


Q ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHH
Q psy323          146 DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQ  225 (255)
Q Consensus       146 ~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (255)
                      ..||.+.....             .....              .       ..+.......+..        .....+.+
T Consensus       195 ~~pf~~~~~~~-------------~~~~~--------------~-------~~~~~~~~~~~~~--------~~~~~~~~  232 (299)
T 3m2w_A          195 YPPFYSNHGLA-------------ISPGM--------------K-------TRIRMGQYEFPNP--------EWSEVSEE  232 (299)
T ss_dssp             SCSCCC--------------------CCS--------------C-------CSSCTTCCSSCHH--------HHTTSCHH
T ss_pred             CCCCCCCcchh-------------hhHHH--------------H-------HHHhhccccCCch--------hcccCCHH
Confidence            99997543110             00000              0       0000000000000        00235688


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCcCCCC
Q psy323          226 LVRFLIPMLRLNPNKRETAEQCLQNEWLIK  255 (255)
Q Consensus       226 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  255 (255)
                      +.+|+.+||+.||++|||++++++||||++
T Consensus       233 ~~~li~~~l~~dP~~Rps~~e~l~hp~~~~  262 (299)
T 3m2w_A          233 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  262 (299)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHHHHHHHcccChhhCCCHHHHhcChhhcc
Confidence            999999999999999999999999999864


No 245
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.91  E-value=3e-27  Score=199.03  Aligned_cols=207  Identities=12%  Similarity=0.062  Sum_probs=126.1

Q ss_pred             HhhhhhhHHHHHHHHHHHHh----hhhhhhhhhcCCCCCCCC-cccccCCCCHHHHHHHHHHHHHhh-ccC---------
Q psy323           14 MENMFVDAIIARIWIKAVMK----KKKLLLKEILPIQPPHQH-KNLTRSSFSLTTFSKYVKQISQFV-YMN---------   78 (255)
Q Consensus        14 l~~~~h~~iv~~~~l~~~~~----~~~~~~~~~~~~~~~l~~-~~~~~~~l~~~~~~~~~~qll~~l-ylH---------   78 (255)
                      ++.+.|+||++   ++..+.    .....++.++++...... ..+.....++..+..++.|++.|| |||         
T Consensus        61 ~~~~~h~~i~~---~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~  137 (336)
T 3g2f_A           61 VPLMEHDNIAR---FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHY  137 (336)
T ss_dssp             STTCCCTTBCC---EEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGC
T ss_pred             HHhccCcchhh---heecccccccCCCceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhcccccc
Confidence            34588999988   653221    111122455555544322 223345679999999999999999 998         


Q ss_pred             -----------CCceeeCCCCcEEEeecCccccCCCCc---------ccccccc-ccccchhhhhc-------CCCCCch
Q psy323           79 -----------EELLYPTQNIEIVITDLEYVRPENDET---------ICREDIH-RQYKAVELIYT-------KEFDMKI  130 (255)
Q Consensus        79 -----------~niLl~~~~~~~kl~DfG~a~~~~~~~---------~~~~~~~-~~y~aPE~l~~-------~~~~~~~  130 (255)
                                 +|||+ +.++.+||+|||+++.+....         .....++ +.|+|||++.+       ..++.++
T Consensus       138 ~~~ivH~Dikp~Nill-~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~  216 (336)
T 3g2f_A          138 KPAISHRDLNSRNVLV-KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQV  216 (336)
T ss_dssp             BCCEECSSCSGGGEEE-CTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHH
T ss_pred             ccceeecccccceEEE-cCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCccccccccccccc
Confidence                       36777 578899999999998765421         1223345 89999999987       3456789


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhc-CCChhhhhhhhhhccccccccccccccccCCCCccHH
Q psy323          131 DIWSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMA-EIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFY  209 (255)
Q Consensus       131 DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (255)
                      ||||+||++|+|++|..||...........     .+....+ .+....+......          ......++..+   
T Consensus       217 DiwslG~il~ell~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~---  278 (336)
T 3g2f_A          217 DMYALGLIYWEIFMRCTDLFPGESVPEYQM-----AFQTEVGNHPTFEDMQVLVSR----------EKQRPKFPEAW---  278 (336)
T ss_dssp             HHHHHHHHHHHHHTTBGGGSTTSCCCCCCC-----TTHHHHCSSCCHHHHHHHHTT----------SCCCCCCCTTC---
T ss_pred             chHHHHHHHHHHHhcCCcCCCccchhHHHH-----hhhcccCCCchHHHHHhhhcc----------cccCCCCCccc---
Confidence            999999999999999766643322111000     0111111 1211111100000          00000111101   


Q ss_pred             HHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          210 RILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                             ......+.++.+||.+||+.||++|||+.++++
T Consensus       279 -------~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          279 -------KENSLAVRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             -------CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -------ccccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence                   112346778999999999999999999999954


No 246
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.91  E-value=3e-26  Score=191.43  Aligned_cols=192  Identities=16%  Similarity=0.195  Sum_probs=133.1

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhh---hhhhhhhcCCCCCCCCccc------ccCCCCHHHHHHHHHHHHHhh-cc
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKK---KLLLKEILPIQPPHQHKNL------TRSSFSLTTFSKYVKQISQFV-YM   77 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~---~~~~~~~~~~~~~l~~~~~------~~~~l~~~~~~~~~~qll~~l-yl   77 (255)
                      .+|+.+++.+.|+||++   +.+++...   ....+.++++.........      ....+++..++.++.|++.|| ||
T Consensus        74 ~~E~~~l~~l~h~~iv~---~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L  150 (317)
T 2buj_A           74 QREADMHRLFNHPNILR---LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI  150 (317)
T ss_dssp             HHHHHHHHTCCCTTBCC---CCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCCCeee---EEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            46999999999999999   87777522   1122344444433221111      235699999999999999999 99


Q ss_pred             C-----------CCceeeCCCCcEEEeecCccccCCCCcc----------cccccc-ccccchhhhhcCC---CCCchhH
Q psy323           78 N-----------EELLYPTQNIEIVITDLEYVRPENDETI----------CREDIH-RQYKAVELIYTKE---FDMKIDI  132 (255)
Q Consensus        78 H-----------~niLl~~~~~~~kl~DfG~a~~~~~~~~----------~~~~~~-~~y~aPE~l~~~~---~~~~~Di  132 (255)
                      |           +||++ +.++.+||+|||++........          .....+ +.|+|||++.+..   ++.++||
T Consensus       151 H~~~ivH~dlkp~NIl~-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di  229 (317)
T 2buj_A          151 HAKGYAHRDLKPTNILL-GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDV  229 (317)
T ss_dssp             HHTTEECCCCCGGGEEE-CTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHH
T ss_pred             HhCCcccCCCCHHHEEE-cCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhH
Confidence            8           78898 5888999999999876643110          112234 8899999998653   6889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHH
Q psy323          133 WSTACLTFELVTGDYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRIL  212 (255)
Q Consensus       133 wSlG~il~~l~~g~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (255)
                      ||+||++++|++|+.||.+....     ...+.....  ..                       .               
T Consensus       230 ~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~--~~-----------------------~---------------  264 (317)
T 2buj_A          230 WSLGCVLYAMMFGEGPYDMVFQK-----GDSVALAVQ--NQ-----------------------L---------------  264 (317)
T ss_dssp             HHHHHHHHHHHHSSCTTHHHHHT-----TSCHHHHHH--CC---------------------------------------
T ss_pred             HHHHHHHHHHHhCCCChhhhhcc-----cchhhHHhh--cc-----------------------C---------------
Confidence            99999999999999999621100     000000000  00                       0               


Q ss_pred             HHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q psy323          213 AKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQN  250 (255)
Q Consensus       213 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  250 (255)
                        ....+...+.++.+++.+||+.||.+|||+++++++
T Consensus       265 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          265 --SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence              000113456789999999999999999999999875


No 247
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.91  E-value=1.2e-27  Score=198.29  Aligned_cols=199  Identities=13%  Similarity=0.135  Sum_probs=121.0

Q ss_pred             chhHHHhh--hhhhHHHHHHHHHHHHhhhhh---hhhhhcCCCCCCC-CcccccCCCCHHHHHHHHHHHHHhh-ccC---
Q psy323            9 PDVKVMEN--MFVDAIIARIWIKAVMKKKKL---LLKEILPIQPPHQ-HKNLTRSSFSLTTFSKYVKQISQFV-YMN---   78 (255)
Q Consensus         9 ~e~~~l~~--~~h~~iv~~~~l~~~~~~~~~---~~~~~~~~~~~l~-~~~~~~~~l~~~~~~~~~~qll~~l-ylH---   78 (255)
                      +|.+++..  +.|+||++   +.+++.....   .++.++++..... ...+....+++..+..++.|++.|| |||   
T Consensus        44 ~e~~~~~~~~~~h~~i~~---~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~  120 (303)
T 3gxj_A           44 REAEIYQTVMLRHENILG---FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEI  120 (303)
T ss_dssp             HHHHHHTSTTCCC-CBCC---EEEEEEEECSSSEEEEEEEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCB
T ss_pred             HHHHHHHHHhccCcceee---eeeecccCCCccceeEEEEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            36777777  79999999   8877776651   2244555544422 2223345788999999999999999 998   


Q ss_pred             ----------------CCceeeCCCCcEEEeecCccccCCCCccc-----ccccc-ccccchhhhhcC------CCCCch
Q psy323           79 ----------------EELLYPTQNIEIVITDLEYVRPENDETIC-----REDIH-RQYKAVELIYTK------EFDMKI  130 (255)
Q Consensus        79 ----------------~niLl~~~~~~~kl~DfG~a~~~~~~~~~-----~~~~~-~~y~aPE~l~~~------~~~~~~  130 (255)
                                      +|||+ +.++.+||+|||+++........     ....+ +.|+|||++.+.      .++.++
T Consensus       121 ~~~~~~~~ivH~Dlkp~Nil~-~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  199 (303)
T 3gxj_A          121 VGTQGKPAIAHRDLKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA  199 (303)
T ss_dssp             CSTTCBC-CCCSCCCGGGC-C-CTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHH
T ss_pred             hhhccCCCEeeCcCCHHHeEE-CCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcch
Confidence                            47888 57889999999999766542221     22245 899999999876      233689


Q ss_pred             hHHHHHHHHHHHhhC----------CCCCCCCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccc
Q psy323          131 DIWSTACLTFELVTG----------DYMFNPFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNIT  200 (255)
Q Consensus       131 DiwSlG~il~~l~~g----------~~pf~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (255)
                      ||||+||++|+|++|          ..||.+.......  ...+   .......                      ....
T Consensus       200 DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~--~~~~---~~~~~~~----------------------~~~~  252 (303)
T 3gxj_A          200 DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS--VEEM---RKVVCEQ----------------------KLRP  252 (303)
T ss_dssp             HHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCC--CC-C---HHHHTTS----------------------CCCC
T ss_pred             hHHHHHHHHHHHHhcCCCccccceeeccccccCCCCcc--HHHH---HHHHHHh----------------------hcCC
Confidence            999999999999999          5555432211100  0000   0000000                      0000


Q ss_pred             cCCCCccHHHHHHHhcCCChhhHHHHHHHHHhccccCCCCCCCHHHHhc
Q psy323          201 SMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPMLRLNPNKRETAEQCLQ  249 (255)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  249 (255)
                      ..+..+           .....+..+.+++.+||+.||++|||++++++
T Consensus       253 ~~~~~~-----------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  290 (303)
T 3gxj_A          253 NIPNRW-----------QSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             CCCGGG-----------GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             Cccccc-----------cchhhHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence            000000           01245678999999999999999999999875


No 248
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.91  E-value=2e-25  Score=190.22  Aligned_cols=138  Identities=12%  Similarity=0.170  Sum_probs=107.2

Q ss_pred             chhHHHhhhh---hhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCccc-------ccCCCCHHHHHHHHHHHHHhh-cc
Q psy323            9 PDVKVMENMF---VDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNL-------TRSSFSLTTFSKYVKQISQFV-YM   77 (255)
Q Consensus         9 ~e~~~l~~~~---h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~l~~~~~~~~~~qll~~l-yl   77 (255)
                      .|..+++.+.   |++++.   +.+.+...+.. +.++++.........       ....+++..++.++.|++.|| ||
T Consensus       113 ~e~~~~~~l~~~~~~~iv~---~~~~~~~~~~~-~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l  188 (365)
T 3e7e_A          113 IGTQLMERLKPSMQHMFMK---FYSAHLFQNGS-VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV  188 (365)
T ss_dssp             HHHHHHHHSCGGGGGGBCC---EEEEEECSSCE-EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhhhhhhhh---hheeeecCCCc-EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            4666666665   888888   77776665553 455555544322221       245799999999999999999 99


Q ss_pred             C-----------CCceeeCC-----------CCcEEEeecCccccCC---CCcccccccc-ccccchhhhhcCCCCCchh
Q psy323           78 N-----------EELLYPTQ-----------NIEIVITDLEYVRPEN---DETICREDIH-RQYKAVELIYTKEFDMKID  131 (255)
Q Consensus        78 H-----------~niLl~~~-----------~~~~kl~DfG~a~~~~---~~~~~~~~~~-~~y~aPE~l~~~~~~~~~D  131 (255)
                      |           +|||+. .           ++.+||+|||+|+...   .....+..++ +.|+|||++.+..|+.++|
T Consensus       189 H~~~ivHrDiKp~NIll~-~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  267 (365)
T 3e7e_A          189 HDCEIIHGDIKPDNFILG-NGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQID  267 (365)
T ss_dssp             HTTTEECCCCSGGGEEEC-GGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHH
T ss_pred             hhCCeecCCCCHHHEEec-ccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCcccc
Confidence            8           799994 4           7899999999997543   2334455567 9999999999999999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCC
Q psy323          132 IWSTACLTFELVTGDYMFNP  151 (255)
Q Consensus       132 iwSlG~il~~l~~g~~pf~~  151 (255)
                      |||+||++|+|++|+.||.+
T Consensus       268 iwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          268 YFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             HHHHHHHHHHHHHSSCCCEE
T ss_pred             HHHHHHHHHHHHhCCCcccc
Confidence            99999999999999999964


No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.90  E-value=1.3e-25  Score=205.97  Aligned_cols=181  Identities=13%  Similarity=0.096  Sum_probs=135.0

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhh----hhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLL----LKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      .+|+.+++.+.|+||++   +++++...+..    .+.++++.............+++.++..++.|++.|| |||    
T Consensus       127 ~~E~~~l~~l~hp~iv~---~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi  203 (681)
T 2pzi_A          127 MAERQFLAEVVHPSIVQ---IFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGL  203 (681)
T ss_dssp             HHHHGGGGGCCCTTBCC---EEEEEEEECTTSCEEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHhcCCCCcCe---EeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            35889999999999999   88888765431    2455555444333334445799999999999999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFN  150 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~  150 (255)
                             +|||+. . +.+||+|||+++.....   ...++ +.|+|||++.+. ++.++||||+||++++|++|.+||.
T Consensus       204 iHrDlkp~NIll~-~-~~~kl~DFG~a~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~  277 (681)
T 2pzi_A          204 VYNDLKPENIMLT-E-EQLKLIDLGAVSRINSF---GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRN  277 (681)
T ss_dssp             ECCCCSGGGEEEC-S-SCEEECCCTTCEETTCC---SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEET
T ss_pred             eecccChHHeEEe-C-CcEEEEecccchhcccC---CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCc
Confidence                   789994 3 48999999999877652   34456 999999999876 4889999999999999999998886


Q ss_pred             CCCCCCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHH
Q psy323          151 PFESKYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFL  230 (255)
Q Consensus       151 ~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (255)
                      +.....                .+..                             .+           ....+..+.++|
T Consensus       278 ~~~~~~----------------~~~~-----------------------------~~-----------~~~~~~~l~~li  301 (681)
T 2pzi_A          278 GRYVDG----------------LPED-----------------------------DP-----------VLKTYDSYGRLL  301 (681)
T ss_dssp             TEECSS----------------CCTT-----------------------------CH-----------HHHHCHHHHHHH
T ss_pred             cccccc----------------cccc-----------------------------cc-----------ccccCHHHHHHH
Confidence            432100                0000                             00           012346788999


Q ss_pred             HhccccCCCCCCCHHHHhcCcCC
Q psy323          231 IPMLRLNPNKRETAEQCLQNEWL  253 (255)
Q Consensus       231 ~~~L~~dP~~R~t~~e~l~hp~~  253 (255)
                      .+||+.||++||++.+.+.|+|+
T Consensus       302 ~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          302 RRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             HHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             hhhccCChhhCCCHHHHHHHHHH
Confidence            99999999999998888888764


No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.81  E-value=8.4e-22  Score=162.53  Aligned_cols=169  Identities=7%  Similarity=-0.033  Sum_probs=116.2

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      +.+|+.+++.+.|+||++   +++++...+.. +.++++..+..............++..++.|++.|| |||       
T Consensus        78 ~~~e~~~l~~l~hp~iv~---~~~~~~~~~~~-~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~  153 (286)
T 3uqc_A           78 TLSRTLRLSRIDKPGVAR---VLDVVHTRAGG-LVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALS  153 (286)
T ss_dssp             HHHHHHHHHTCCCTTBCC---EEEEEEETTEE-EEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHhcCCCCCcce---eeEEEEECCcE-EEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccC
Confidence            345889999999999999   88888776653 455555443322222333456678899999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCCccccccccccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCCCCCCCCC
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDETICREDIHRQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDYMFNPFES  154 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~  154 (255)
                          +|||+ +.+|.+||+++|.                  ++       .++.++||||+||++|+|++|+.||.+.+.
T Consensus       154 Dikp~NIll-~~~g~~kl~~~~~------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~  207 (286)
T 3uqc_A          154 IDHPSRVRV-SIDGDVVLAYPAT------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGV  207 (286)
T ss_dssp             CCSGGGEEE-ETTSCEEECSCCC------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred             CCCcccEEE-cCCCCEEEEeccc------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence                68888 4778888885543                  22       368899999999999999999999986542


Q ss_pred             CCCCccHHHHHHHHHHhcCCChhhhhhhhhhccccccccccccccccCCCCccHHHHHHHhcCCChhhHHHHHHHHHhcc
Q psy323          155 KYYTIDEHHILKIIQLMAEIPPNLMDNERCIRNIKVLLERDQHNITSMNAKDNFYRILAKSYKIPKEDAKQLVRFLIPML  234 (255)
Q Consensus       155 ~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  234 (255)
                      .......     .....+.+                                .....      .....+.++.+++.+||
T Consensus       208 ~~~~~~~-----~~~~~~~~--------------------------------~~~~~------~~~~~~~~l~~li~~~l  244 (286)
T 3uqc_A          208 RSGLAPA-----ERDTAGQP--------------------------------IEPAD------IDRDIPFQISAVAARSV  244 (286)
T ss_dssp             CCCSEEC-----CBCTTSCB--------------------------------CCHHH------HCTTSCHHHHHHHHHHH
T ss_pred             chhhHHH-----HHHhccCC--------------------------------CChhh------cccCCCHHHHHHHHHHc
Confidence            1100000     00000000                                00000      11345678999999999


Q ss_pred             ccCCCCCCCHHHHhc
Q psy323          235 RLNPNKRETAEQCLQ  249 (255)
Q Consensus       235 ~~dP~~R~t~~e~l~  249 (255)
                      +.||++| |+.++++
T Consensus       245 ~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          245 QGDGGIR-SASTLLN  258 (286)
T ss_dssp             CTTSSCC-CHHHHHH
T ss_pred             ccCCccC-CHHHHHH
Confidence            9999999 9999875


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.69  E-value=1.7e-20  Score=168.32  Aligned_cols=132  Identities=8%  Similarity=-0.046  Sum_probs=87.5

Q ss_pred             CCchhHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCc--ccccCCCCHHHHHHHHHHHHHhh-ccC----
Q psy323            7 VNPDVKVMENM-FVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHK--NLTRSSFSLTTFSKYVKQISQFV-YMN----   78 (255)
Q Consensus         7 ~~~e~~~l~~~-~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~qll~~l-ylH----   78 (255)
                      +.+|+++|+++ .|+||++   +++++++.+.. |.+|++..+....  ....+.+++.   .|+.||+.|| |+|    
T Consensus       288 ~~~E~~~l~~~~~~~~i~~---~~~~~ed~~~~-yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GI  360 (569)
T 4azs_A          288 LHNEIKFLTQPPAGFDAPA---VLAHGENAQSG-WLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGF  360 (569)
T ss_dssp             HHHHHHHHHSCCTTCCCCC---EEEEEECSSEE-EEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhcCCCCCeeE---EEEEEEECCEE-EEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCc
Confidence            45699999999 7999999   99998887774 6666665553332  2334567765   4789999999 998    


Q ss_pred             -------CCceeeCCCCcEEEeecCccccCCCC-cccccccc-ccccchhhhhcCCCCCchhHHHHHHHHHHHhhCCC
Q psy323           79 -------EELLYPTQNIEIVITDLEYVRPENDE-TICREDIH-RQYKAVELIYTKEFDMKIDIWSTACLTFELVTGDY  147 (255)
Q Consensus        79 -------~niLl~~~~~~~kl~DfG~a~~~~~~-~~~~~~~~-~~y~aPE~l~~~~~~~~~DiwSlG~il~~l~~g~~  147 (255)
                             +|||+ +.+|.+||+|||+|+..... +..+..++ +.|+|||++.+. +..++|+||+|++++++.++..
T Consensus       361 IHRDIKPeNILL-~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          361 WHDDVRPWNVMV-DARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             EESCCCGGGEEE-CTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred             eeccCchHhEEE-CCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccc
Confidence                   79999 58899999999999987653 23344566 999999999875 5678999999999887766543


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.22  E-value=1.4e-13  Score=122.73  Aligned_cols=130  Identities=12%  Similarity=0.120  Sum_probs=90.0

Q ss_pred             CCchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC-------
Q psy323            7 VNPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN-------   78 (255)
Q Consensus         7 ~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH-------   78 (255)
                      +.+|+++|+.+.|+||+... +..+.....   +.++++............      +..++.|++.|| |||       
T Consensus       386 ~~~E~~il~~l~h~nIv~~~-~~~~~~~~~---~lVmE~~~ggsL~~~l~~------~~~i~~qi~~aL~~LH~~gIiHr  455 (540)
T 3en9_A          386 TAREARYLALVKDFGIPAPY-IFDVDLDNK---RIMMSYINGKLAKDVIED------NLDIAYKIGEIVGKLHKNDVIHN  455 (540)
T ss_dssp             HHHHHHHHHHGGGGTCCCCC-EEEEETTTT---EEEEECCCSEEHHHHSTT------CTHHHHHHHHHHHHHHHTTEECT
T ss_pred             HHHHHHHHHhcCCCCcCceE-EEEEeCCcc---EEEEECCCCCCHHHHHHH------HHHHHHHHHHHHHHHHHCcCccC
Confidence            45799999999999999300 333322222   334444433222222211      568999999999 998       


Q ss_pred             ----CCceeeCCCCcEEEeecCccccCCCCccc--------ccccc-ccccchhhhhc--CCCCCchhHHHHHHHHHHHh
Q psy323           79 ----EELLYPTQNIEIVITDLEYVRPENDETIC--------REDIH-RQYKAVELIYT--KEFDMKIDIWSTACLTFELV  143 (255)
Q Consensus        79 ----~niLl~~~~~~~kl~DfG~a~~~~~~~~~--------~~~~~-~~y~aPE~l~~--~~~~~~~DiwSlG~il~~l~  143 (255)
                          +|||+. .  .+||+|||+|+........        ...++ +.|+|||++.+  ..|+..+|+||...-..+..
T Consensus       456 DiKp~NILl~-~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v  532 (540)
T 3en9_A          456 DLTTSNFIFD-K--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDV  532 (540)
T ss_dssp             TCCTTSEEES-S--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHH
T ss_pred             CCCHHHEEEC-C--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                799995 4  9999999999988663211        23345 99999999987  47888999999887777766


Q ss_pred             hCCCCC
Q psy323          144 TGDYMF  149 (255)
Q Consensus       144 ~g~~pf  149 (255)
                      .++.+|
T Consensus       533 ~~r~rY  538 (540)
T 3en9_A          533 ERRARY  538 (540)
T ss_dssp             HTCSCC
T ss_pred             Hhcccc
Confidence            665544


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.32  E-value=2.2e-08  Score=81.86  Aligned_cols=90  Identities=10%  Similarity=0.082  Sum_probs=58.5

Q ss_pred             CchhHHHhhhhhhHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCcccccCCCCHHHHHHHHHHHHHhh-ccC--------
Q psy323            8 NPDVKVMENMFVDAIIARIWIKAVMKKKKLLLKEILPIQPPHQHKNLTRSSFSLTTFSKYVKQISQFV-YMN--------   78 (255)
Q Consensus         8 ~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~qll~~l-ylH--------   78 (255)
                      .+|+.+|+.+.  | +.   +..++.....  +.++++........     +.......++.|++.|| |||        
T Consensus       152 ~~E~~~l~~l~--~-~~---v~~~~~~~~~--~lvmE~~~g~~L~~-----l~~~~~~~i~~qi~~~l~~lH~~giiHrD  218 (282)
T 1zar_A          152 RNEFRALQKLQ--G-LA---VPKVYAWEGN--AVLMELIDAKELYR-----VRVENPDEVLDMILEEVAKFYHRGIVHGD  218 (282)
T ss_dssp             HHHHHHHHHTT--T-SS---SCCEEEEETT--EEEEECCCCEEGGG-----CCCSCHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHHHHHhcc--C-CC---cCeEEeccce--EEEEEecCCCcHHH-----cchhhHHHHHHHHHHHHHHHHHCCCEeCC
Confidence            46788888887  3 44   4454433222  34444433322211     12244568999999999 998        


Q ss_pred             ---CCceeeCCCCcEEEeecCccccCCCCccccccccccccchhhhhc
Q psy323           79 ---EELLYPTQNIEIVITDLEYVRPENDETICREDIHRQYKAVELIYT  123 (255)
Q Consensus        79 ---~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~y~aPE~l~~  123 (255)
                         +|||+.  ++.+||+|||+|+...           .++|||++.+
T Consensus       219 lkp~NILl~--~~~vkl~DFG~a~~~~-----------~~~a~e~l~r  253 (282)
T 1zar_A          219 LSQYNVLVS--EEGIWIIDFPQSVEVG-----------EEGWREILER  253 (282)
T ss_dssp             CSTTSEEEE--TTEEEECCCTTCEETT-----------STTHHHHHHH
T ss_pred             CCHHHEEEE--CCcEEEEECCCCeECC-----------CCCHHHHHHH
Confidence               799995  8899999999986433           3578888754


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=96.48  E-value=0.00082  Score=53.74  Aligned_cols=40  Identities=8%  Similarity=0.120  Sum_probs=33.2

Q ss_pred             CHHHHHHHHHHHHHhh-ccC------------CCceeeCCCCcEEEeecCccccCC
Q psy323           60 SLTTFSKYVKQISQFV-YMN------------EELLYPTQNIEIVITDLEYVRPEN  102 (255)
Q Consensus        60 ~~~~~~~~~~qll~~l-ylH------------~niLl~~~~~~~kl~DfG~a~~~~  102 (255)
                      ++..+..++.|++.|| |||            +|||+. .  .++|+|||+|....
T Consensus       168 ~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~-~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          168 KELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYI-D--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEES-S--SEEECCCTTCEETT
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEc-C--cEEEEECcccccCC
Confidence            3567889999999999 887            588884 3  89999999997653


No 255
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.67  E-value=0.051  Score=42.09  Aligned_cols=74  Identities=9%  Similarity=-0.053  Sum_probs=44.8

Q ss_pred             CCCCHHHHHHHHHHHHHhh-cc-----C-------CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhh
Q psy323           57 SSFSLTTFSKYVKQISQFV-YM-----N-------EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIY  122 (255)
Q Consensus        57 ~~l~~~~~~~~~~qll~~l-yl-----H-------~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~  122 (255)
                      .+++|+++|.++.|.+.+| -+     +       ..+++ ..+|.|.+.+ +.+           ... ..+.|||...
T Consensus        44 ~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l-~~dG~V~f~~-~~s-----------~~~~~~~~~pe~~~  110 (229)
T 2yle_A           44 QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRV-WRDGAVTLAP-AAD-----------DAGEPPPVAGKLGY  110 (229)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEE-ETTSCEEECC-C-----------------------CCSS
T ss_pred             CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEE-ecCCceeccc-ccc-----------cccccCCCChhhcc
Confidence            6899999999999999998 33     2       23344 3455554443 110           011 3456777763


Q ss_pred             cCCCCCchhHHHHHHHHHHHhh
Q psy323          123 TKEFDMKIDIWSTACLTFELVT  144 (255)
Q Consensus       123 ~~~~~~~~DiwSlG~il~~l~~  144 (255)
                       .+.+.+.=|+|+|+++|..+-
T Consensus       111 -~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A          111 -SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             -SSSCHHHHHHHHHHHHHHHHT
T ss_pred             -ccchHHHHHHHHHHHHHHHhh
Confidence             234578889999999998775


No 256
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=89.11  E-value=0.088  Score=44.65  Aligned_cols=39  Identities=5%  Similarity=0.073  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHHHhh-ccC-----------CCceeeCCCC----------cEEEeecCccccC
Q psy323           62 TTFSKYVKQISQFV-YMN-----------EELLYPTQNI----------EIVITDLEYVRPE  101 (255)
Q Consensus        62 ~~~~~~~~qll~~l-ylH-----------~niLl~~~~~----------~~kl~DfG~a~~~  101 (255)
                      .....++.|++.+| |+|           .|||+. .++          .+.|+||+-+...
T Consensus       205 ~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~-~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          205 PDPASLYADLIALILRLAKHGLIHGDFNEFNILIR-EEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-EEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEe-CCCCcccccccccceEEEEeCCcccC
Confidence            34567899999999 997           799995 433          3899999976543


No 257
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=82.37  E-value=0.68  Score=37.31  Aligned_cols=70  Identities=20%  Similarity=0.250  Sum_probs=40.2

Q ss_pred             CCceeeCC-CCcEEEeecCccccCCCCccc---ccc---cc--------ccc--cc-hhhhhcCCCCCchhHHHHHHHHH
Q psy323           79 EELLYPTQ-NIEIVITDLEYVRPENDETIC---RED---IH--------RQY--KA-VELIYTKEFDMKIDIWSTACLTF  140 (255)
Q Consensus        79 ~niLl~~~-~~~~kl~DfG~a~~~~~~~~~---~~~---~~--------~~y--~a-PE~l~~~~~~~~~DiwSlG~il~  140 (255)
                      .|+++.+. .+.+.++||+.+..-......   ...   .+        ..|  .. |+.....  ....+.|+++.+++
T Consensus       201 ~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~--~~~~~~~~l~~~~~  278 (304)
T 3sg8_A          201 DHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKY--RMKEKYWSFEKIIY  278 (304)
T ss_dssp             GGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred             ccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHH--HHHHHHHHHHHHHH
Confidence            79999643 456789999988653321000   000   01        111  11 2222111  12368999999999


Q ss_pred             HHhhCCCCCC
Q psy323          141 ELVTGDYMFN  150 (255)
Q Consensus       141 ~l~~g~~pf~  150 (255)
                      .+.+|..+|.
T Consensus       279 ~~~~g~~~~~  288 (304)
T 3sg8_A          279 GKEYGYMDWY  288 (304)
T ss_dssp             HHHTTCHHHH
T ss_pred             HHHcCCHHHH
Confidence            9999987764


No 258
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=34.35  E-value=12  Score=28.66  Aligned_cols=20  Identities=5%  Similarity=-0.066  Sum_probs=15.3

Q ss_pred             CCceeeCCCCcEEEeecCccc
Q psy323           79 EELLYPTQNIEIVITDLEYVR   99 (255)
Q Consensus        79 ~niLl~~~~~~~kl~DfG~a~   99 (255)
                      .|||+. .++.+.|+|||.+.
T Consensus       194 ~Nil~~-~~~~~~liD~~~a~  213 (264)
T 1nd4_A          194 PNIMVE-NGRFSGFIDCGRLG  213 (264)
T ss_dssp             GGEEEE-TTEEEEECCCTTCE
T ss_pred             CcEEEE-CCcEEEEEcchhcc
Confidence            799984 55556799999874


No 259
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=32.82  E-value=29  Score=31.61  Aligned_cols=41  Identities=15%  Similarity=0.242  Sum_probs=26.9

Q ss_pred             C-CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcC
Q psy323           78 N-EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTK  124 (255)
Q Consensus        78 H-~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~  124 (255)
                      | +|||+. ..|++.-+|||.+-  +.. .  .... |.=..|+++..-
T Consensus       554 H~~NILid-~tG~v~HIDFG~~f--~~~-p--~pe~VPFRLT~~mv~~m  596 (696)
T 2x6h_A          554 HLDNLLLT-TNGKLFHIDFGYIL--GRD-P--KPMPPPMKLSKEMVEAM  596 (696)
T ss_dssp             CTTTEEEC-TTSCEEECCCCSCT--TCC-S--SSCCCSSCCCHHHHHHT
T ss_pred             CCcceEEe-CCCCEEEEeehhhh--ccC-C--CCcCCCeecCHHHHHHh
Confidence            6 899995 79999999999874  221 1  1112 444667776543


No 260
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=31.32  E-value=33  Score=30.73  Aligned_cols=41  Identities=12%  Similarity=0.204  Sum_probs=27.4

Q ss_pred             C-CCceeeCCCCcEEEeecCccccCCCCcccccccc-ccccchhhhhcC
Q psy323           78 N-EELLYPTQNIEIVITDLEYVRPENDETICREDIH-RQYKAVELIYTK  124 (255)
Q Consensus        78 H-~niLl~~~~~~~kl~DfG~a~~~~~~~~~~~~~~-~~y~aPE~l~~~  124 (255)
                      | +|||++ .+|++.-+|||.+-  +.. .  .... |.=..+|++..-
T Consensus       480 H~~NILld-~tG~v~HIDFG~~f--~~~-p--~pe~vPFRLT~~mv~~m  522 (614)
T 3ls8_A          480 HLDNLLLT-KTGKLFHIDFGYIL--GRD-P--KPLPPPMKLNKEMVEGM  522 (614)
T ss_dssp             CTTSEEEC-TTSCEEECCCSSCT--TCC-S--SSSCCSSCCCHHHHHHT
T ss_pred             CCcceeEc-CCCCEeeeehHHhh--ccC-C--CCCCCCeecCHHHHHHh
Confidence            6 899994 89999999999873  221 1  1112 555677777644


No 261
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=22.97  E-value=49  Score=31.85  Aligned_cols=21  Identities=5%  Similarity=0.202  Sum_probs=18.4

Q ss_pred             C-CCceeeCCCCcEEEeecCccc
Q psy323           78 N-EELLYPTQNIEIVITDLEYVR   99 (255)
Q Consensus        78 H-~niLl~~~~~~~kl~DfG~a~   99 (255)
                      | +|||++ ..|++.-+|||.+-
T Consensus       943 H~~NILid-~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          943 HSDNIMVK-KTGQLFHIDFGHIL  964 (1092)
T ss_dssp             CTTTEEEC-TTSCEEECCCSCCS
T ss_pred             CCccEEEe-cCCCEEEEeehhhh
Confidence            5 899995 79999999999874


No 262
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=22.33  E-value=43  Score=31.72  Aligned_cols=21  Identities=5%  Similarity=0.165  Sum_probs=18.4

Q ss_pred             C-CCceeeCCCCcEEEeecCccc
Q psy323           78 N-EELLYPTQNIEIVITDLEYVR   99 (255)
Q Consensus        78 H-~niLl~~~~~~~kl~DfG~a~   99 (255)
                      | +|||++ ..|++.-+|||.+-
T Consensus       791 H~~NILid-~tG~v~HIDFG~~f  812 (940)
T 2wxf_A          791 HSDNIMIR-ESGQLFHIDFGHFL  812 (940)
T ss_dssp             CGGGEEEE-TTSCEEECCCCCCT
T ss_pred             CcccEEEe-cCCCEEEEeehhhh
Confidence            6 899996 79999999999874


No 263
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=21.32  E-value=31  Score=29.65  Aligned_cols=30  Identities=10%  Similarity=-0.065  Sum_probs=24.4

Q ss_pred             CCCCchhHHHhhhhhhHHHHHHHHHHHHhhhhh
Q psy323            5 APVNPDVKVMENMFVDAIIARIWIKAVMKKKKL   37 (255)
Q Consensus         5 ~~~~~e~~~l~~~~h~~iv~~~~l~~~~~~~~~   37 (255)
                      ..|..|++.+..+.|+|+++   +.+++.....
T Consensus       324 ~eF~~Eve~L~~i~HrNLV~---L~gyC~s~~~  353 (487)
T 3oja_A          324 ETERLECERENQARQREIDA---LKEQYRTVID  353 (487)
T ss_dssp             -CHHHHHHHHHHHHHHHHHH---HHHHTCCCCC
T ss_pred             HHHHHHHHHHhcccccchhh---HHHHhcChHH
Confidence            35667999999999999999   8888876543


Done!