BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3230
(151 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P14130|RS14_DROME 40S ribosomal protein S14 OS=Drosophila melanogaster GN=RpS14a PE=1
SV=1
Length = 151
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 130/140 (92%), Positives = 136/140 (97%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
MAPRK KVQKEEV V LGPQV++GE VFGVAHI+ASFNDTFVHVTDLSGRETIAR+TGGM
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGN+TKTPGPGAQSALRALA
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS+MKIGRIEDVTPIPSDST
Sbjct: 121 RSSMKIGRIEDVTPIPSDST 140
>sp|Q6XI08|RS14A_DROYA 40S ribosomal protein S14a OS=Drosophila yakuba GN=RpS14a PE=2 SV=1
Length = 151
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 130/140 (92%), Positives = 136/140 (97%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
MAPRK KVQKEEV V LGPQV++GE VFGVAHI+ASFNDTFVHVTDLSGRETIAR+TGGM
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGN+TKTPGPGAQSALRALA
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS+MKIGRIEDVTPIPSDST
Sbjct: 121 RSSMKIGRIEDVTPIPSDST 140
>sp|Q1HR24|RS14_AEDAE 40S ribosomal protein S14 OS=Aedes aegypti GN=RpS14 PE=2 SV=1
Length = 151
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/140 (91%), Positives = 135/140 (96%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
MAPRK K KEEV VSLGPQV+EGE VFGVAHI+ASFNDTFVHVTDLSG+ETI+R+TGGM
Sbjct: 1 MAPRKNKTVKEEVQVSLGPQVREGEIVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGM 60
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDEASPYAAMLAAQDVAEKCK+LGITALHIKLRATGGNRTKTPGPGAQSALRALA
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS+MKIGRIEDVTPIPSDST
Sbjct: 121 RSSMKIGRIEDVTPIPSDST 140
>sp|Q5UAM9|RS14_BOMMO 40S ribosomal protein S14 OS=Bombyx mori GN=RpS14 PE=2 SV=1
Length = 151
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/140 (91%), Positives = 133/140 (95%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
MAPRK KV KEEV V+LGPQ GE VFGVAHIFASFNDTFVHVTDLSGRETIAR+TGGM
Sbjct: 1 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGN+TKTPGPGAQSALRALA
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS+MKIGRIEDVTP+PSDST
Sbjct: 121 RSSMKIGRIEDVTPVPSDST 140
>sp|Q7QBX2|RS14B_ANOGA 40S ribosomal protein S14b OS=Anopheles gambiae GN=RpS14b PE=3 SV=2
Length = 152
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/141 (90%), Positives = 136/141 (96%), Gaps = 1/141 (0%)
Query: 1 MAP-RKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGG 59
MAP RK KV KEEV VSLGPQV++GE VFGVAHI+ASFNDTFVHVTDLSG+ETI+R+TGG
Sbjct: 1 MAPSRKNKVAKEEVQVSLGPQVRDGEVVFGVAHIYASFNDTFVHVTDLSGKETISRVTGG 60
Query: 60 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRAL 119
MKVKADRDEASPYAAMLAAQDVAEKCK+LGITALHIKLRATGGNRTKTPGPGAQSALRAL
Sbjct: 61 MKVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNRTKTPGPGAQSALRAL 120
Query: 120 ARSNMKIGRIEDVTPIPSDST 140
ARS+MKIGRIEDVTPIPSDST
Sbjct: 121 ARSSMKIGRIEDVTPIPSDST 141
>sp|Q7QEH1|RS14A_ANOGA 40S ribosomal protein S14a OS=Anopheles gambiae GN=RpS14a PE=3 SV=2
Length = 152
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/141 (90%), Positives = 136/141 (96%), Gaps = 1/141 (0%)
Query: 1 MAP-RKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGG 59
MAP RK KV KEEV VSLGPQV++GE VFGVAHI+ASFNDTFVHVTDLSG+ETI+R+TGG
Sbjct: 1 MAPSRKNKVVKEEVQVSLGPQVRDGEVVFGVAHIYASFNDTFVHVTDLSGKETISRVTGG 60
Query: 60 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRAL 119
MKVKADRDEASPYAAMLAAQDVAEKCK+LGITALHIKLRATGGNRTKTPGPGAQSALRAL
Sbjct: 61 MKVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNRTKTPGPGAQSALRAL 120
Query: 120 ARSNMKIGRIEDVTPIPSDST 140
ARS+MKIGRIEDVTPIPSDST
Sbjct: 121 ARSSMKIGRIEDVTPIPSDST 141
>sp|P62264|RS14_MOUSE 40S ribosomal protein S14 OS=Mus musculus GN=Rps14 PE=2 SV=3
Length = 151
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/140 (88%), Positives = 133/140 (95%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
MAPRKGK +KEE ++SLGPQV EGE+VFGV HIFASFNDTFVHVTDLSG+ETI R+TGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRATGGNRTKTPGPGAQSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS MKIGRIEDVTPIPSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140
>sp|P62263|RS14_HUMAN 40S ribosomal protein S14 OS=Homo sapiens GN=RPS14 PE=1 SV=3
Length = 151
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/140 (88%), Positives = 133/140 (95%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
MAPRKGK +KEE ++SLGPQV EGE+VFGV HIFASFNDTFVHVTDLSG+ETI R+TGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRATGGNRTKTPGPGAQSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS MKIGRIEDVTPIPSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140
>sp|P62265|RS14_CRIGR 40S ribosomal protein S14 OS=Cricetulus griseus GN=RPS14 PE=2 SV=3
Length = 151
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/140 (88%), Positives = 133/140 (95%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
MAPRKGK +KEE ++SLGPQV EGE+VFGV HIFASFNDTFVHVTDLSG+ETI R+TGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRATGGNRTKTPGPGAQSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS MKIGRIEDVTPIPSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140
>sp|P13471|RS14_RAT 40S ribosomal protein S14 OS=Rattus norvegicus GN=Rps14 PE=2 SV=3
Length = 151
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 124/140 (88%), Positives = 133/140 (95%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
MAPRKGK +KEE ++SLGPQV EGE+VFGV HIFASFNDTFVHVTDLSG+ETI R+TGGM
Sbjct: 1 MAPRKGKDKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRATGGNRTKTPGPGAQSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS MKIGRIEDVTPIPSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140
>sp|Q08699|RS14_PODCA 40S ribosomal protein S14 OS=Podocoryne carnea GN=RPS14 PE=2 SV=1
Length = 151
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 122/140 (87%), Positives = 132/140 (94%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
MAPRKGK KEE ++SLGPQV +GE+VFGVAHIFASFNDTFVHVTDLSG+ETIAR+TGGM
Sbjct: 1 MAPRKGKAPKEEQVISLGPQVADGENVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGM 60
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVA +CK +GITALH+KLRATGGNRTKTPGPGAQSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAVRCKEIGITALHVKLRATGGNRTKTPGPGAQSALRALA 120
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS MKIGRIEDVTPIPSD T
Sbjct: 121 RSGMKIGRIEDVTPIPSDCT 140
>sp|P48855|RS14_PROCL 40S ribosomal protein S14 OS=Procambarus clarkii GN=RPS14 PE=2 SV=1
Length = 151
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 119/140 (85%), Positives = 128/140 (91%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
MAPRKGKVQKEEV V LGPQV +GE VF V HI+AS+NDTFVHVTDLSGRETI RITGG
Sbjct: 1 MAPRKGKVQKEEVQVQLGPQVLDGEKVFAVCHIYASYNDTFVHVTDLSGRETIVRITGGQ 60
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVAEKCK+LGI LHIK+RATGGN+TKTPGPG QSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAEKCKSLGINCLHIKIRATGGNKTKTPGPGGQSALRALA 120
Query: 121 RSNMKIGRIEDVTPIPSDST 140
R+ MKIGRIEDVTP+PSDST
Sbjct: 121 RAGMKIGRIEDVTPVPSDST 140
>sp|P48150|RS14_CAEEL 40S ribosomal protein S14 OS=Caenorhabditis elegans GN=rps-14 PE=3
SV=1
Length = 152
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 118/141 (83%), Positives = 130/141 (92%), Gaps = 1/141 (0%)
Query: 1 MAP-RKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGG 59
MAP RKGK ++E+ +VSLGPQ KEGE +FGVAHIFASFNDTFVH+TD+SGRETI R+TGG
Sbjct: 1 MAPARKGKAKEEQAVVSLGPQAKEGELIFGVAHIFASFNDTFVHITDISGRETIVRVTGG 60
Query: 60 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRAL 119
MKVKADRDE+SPYAAMLAAQDVA++CK LGI ALHIKLRATGG RTKTPGPGAQSALRAL
Sbjct: 61 MKVKADRDESSPYAAMLAAQDVADRCKQLGINALHIKLRATGGTRTKTPGPGAQSALRAL 120
Query: 120 ARSNMKIGRIEDVTPIPSDST 140
AR+ MKIGRIEDVTPIPSD T
Sbjct: 121 ARAGMKIGRIEDVTPIPSDCT 141
>sp|P46295|RS14_CHLRE 40S ribosomal protein S14 OS=Chlamydomonas reinhardtii GN=RPS14
PE=3 SV=1
Length = 153
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/142 (84%), Positives = 130/142 (91%), Gaps = 2/142 (1%)
Query: 1 MAPRKGKVQKE--EVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITG 58
MAP+K E + +VSLGP V+EGE VFGVAHIFASFNDTFVHVTDLSGRETI+R+TG
Sbjct: 1 MAPKKAAKGDEAPKEVVSLGPTVREGEHVFGVAHIFASFNDTFVHVTDLSGRETISRVTG 60
Query: 59 GMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRA 118
GMKVKADRDE+SPYAAMLAAQDVA+KCK LGITALHIKLRATGGNRTKTPGPGAQSALRA
Sbjct: 61 GMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALRA 120
Query: 119 LARSNMKIGRIEDVTPIPSDST 140
LAR+ MKIGRIEDVTPIP+DST
Sbjct: 121 LARAGMKIGRIEDVTPIPTDST 142
>sp|Q9SIH0|RS141_ARATH 40S ribosomal protein S14-1 OS=Arabidopsis thaliana GN=RPS14A PE=1
SV=1
Length = 150
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/140 (82%), Positives = 128/140 (91%), Gaps = 1/140 (0%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
M+ RK K K +V V+LGP V+EGE VFGV HIFASFNDTF+HVTDLSGRET+ RITGGM
Sbjct: 1 MSKRKTKEPKVDV-VTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGM 59
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVA++CK LGITA+H+KLRATGGN+TKTPGPGAQSALRALA
Sbjct: 60 KVKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALA 119
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS MKIGRIEDVTPIP+DST
Sbjct: 120 RSGMKIGRIEDVTPIPTDST 139
>sp|Q9CAX6|RS142_ARATH 40S ribosomal protein S14-2 OS=Arabidopsis thaliana GN=RPS14B PE=1
SV=1
Length = 150
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/140 (82%), Positives = 127/140 (90%), Gaps = 1/140 (0%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
M+ RK K K E V+LGP V+EGE VFGV HIFASFNDTF+HVTDLSGRET+ RITGGM
Sbjct: 1 MSKRKTKEPKVET-VTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGM 59
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVA++CK LGITA+H+KLRATGGN+TKTPGPGAQSALRALA
Sbjct: 60 KVKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALA 119
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS MKIGRIEDVTPIP+DST
Sbjct: 120 RSGMKIGRIEDVTPIPTDST 139
>sp|P19950|RS141_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=3 SV=1
Length = 149
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 116/140 (82%), Positives = 128/140 (91%), Gaps = 2/140 (1%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
M+ RK + KEE + LGP V+EGE VFGVAHIFASFNDTF+HVTDLSGRET+ RITGGM
Sbjct: 1 MSRRKTREPKEENV--LGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 58
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRATGGN+TKTPGPGAQSALRALA
Sbjct: 59 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 118
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS MKIGRIEDVTP+P+DST
Sbjct: 119 RSGMKIGRIEDVTPVPTDST 138
>sp|P42036|RS143_ARATH 40S ribosomal protein S14-3 OS=Arabidopsis thaliana GN=RPS14C PE=2
SV=2
Length = 150
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/140 (81%), Positives = 127/140 (90%), Gaps = 1/140 (0%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
M+ RK K K E V+LGP V+EGE VFGV H+FASFNDTF+HVTDLSGRET+ RITGGM
Sbjct: 1 MSKRKTKEPKVEN-VTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGM 59
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVA++CK LGITA+H+KLRATGGN+TKTPGPGAQSALRALA
Sbjct: 60 KVKADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALA 119
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS MKIGRIEDVTPIP+DST
Sbjct: 120 RSGMKIGRIEDVTPIPTDST 139
>sp|P19951|RS142_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=3 SV=1
Length = 150
Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/137 (82%), Positives = 126/137 (91%), Gaps = 2/137 (1%)
Query: 4 RKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVK 63
+K + KEE + LGP V+EGE VFGVAHIFASFNDTF+HVTDLSGRET+ RITGGMKVK
Sbjct: 5 KKTREPKEENV--LGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVK 62
Query: 64 ADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSN 123
ADRDE+SPYAAMLA+QDVA++CK LGITALHIKLRATGGN+TKTPGPGAQSALRALARS
Sbjct: 63 ADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSG 122
Query: 124 MKIGRIEDVTPIPSDST 140
MKIGRIEDVTP+P+DST
Sbjct: 123 MKIGRIEDVTPVPTDST 139
>sp|O22584|RS14_LUPLU 40S ribosomal protein S14 OS=Lupinus luteus GN=RPS14 PE=2 SV=1
Length = 150
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/140 (82%), Positives = 125/140 (89%), Gaps = 1/140 (0%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
M+ RK + KEE V+LGP V +GE VFGVA IFASFNDTF+HVTDLSGRET+ RITGGM
Sbjct: 1 MSRRKVRDTKEET-VTLGPAVSDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGM 59
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVA +CK LGITALHIKLRATGGN+TKTPG GAQSALRALA
Sbjct: 60 KVKADRDESSPYAAMLAAQDVATRCKELGITALHIKLRATGGNKTKTPGRGAQSALRALA 119
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS MKIGRIEDVTPIPSDST
Sbjct: 120 RSGMKIGRIEDVTPIPSDST 139
>sp|Q54EG3|RS14_DICDI 40S ribosomal protein S14 OS=Dictyostelium discoideum GN=rps14 PE=3
SV=1
Length = 152
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 112/149 (75%), Positives = 128/149 (85%), Gaps = 2/149 (1%)
Query: 5 KGKVQKEEVLVSLGPQVKEG--EDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKV 62
K +V+ +V+ +L ++ G E VFGVAHIFASFNDTFVHVTDLS +ETI R+TGGMKV
Sbjct: 4 KKEVKAPKVVEALSAKIPCGPSELVFGVAHIFASFNDTFVHVTDLSSKETIVRVTGGMKV 63
Query: 63 KADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARS 122
K DRDE+SPYAA +AAQDVA +CK LG+TALHIKLRATGGN +KTPGPGAQSALRALARS
Sbjct: 64 KTDRDESSPYAATMAAQDVALRCKELGVTALHIKLRATGGNGSKTPGPGAQSALRALARS 123
Query: 123 NMKIGRIEDVTPIPSDSTRRKGGRRGRRL 151
M+IGRIEDVTPIP+DSTRRK G RGRRL
Sbjct: 124 GMRIGRIEDVTPIPTDSTRRKSGHRGRRL 152
>sp|P19115|RS14_NEUCR 40S ribosomal protein S14 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-14
PE=3 SV=2
Length = 150
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/140 (79%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
Query: 1 MAPRKGKVQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGM 60
M P+K +E +SLGPQ++EGE VFGVA IFASFNDTFVHVTDLSGRET R+ GG+
Sbjct: 1 MPPKKAARPAQEN-ISLGPQIREGELVFGVARIFASFNDTFVHVTDLSGRETTDRVIGGI 59
Query: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
KVKADRDE+SPYAAMLAAQDVA +CK LGITALHIK+RATGGN T+TPGPGAQSALRALA
Sbjct: 60 KVKADRDESSPYAAMLAAQDVAARCKELGITALHIKIRATGGNGTRTPGPGAQSALRALA 119
Query: 121 RSNMKIGRIEDVTPIPSDST 140
RS MKIGRIEDVTP PSDST
Sbjct: 120 RSGMKIGRIEDVTPTPSDST 139
>sp|P27069|RS14_KLULA 40S ribosomal protein S14 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RPS14 PE=3 SV=1
Length = 137
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 111/121 (91%)
Query: 20 QVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQ 79
Q K+ VFGVA IFASFNDTFVHVTDLSGRETIAR+TGGMKVKADRDE+SPYAAMLAAQ
Sbjct: 6 QAKDNSQVFGVARIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDESSPYAAMLAAQ 65
Query: 80 DVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDS 139
DVA KCK +GITA+HIK+RATGG R+KTPGPG Q+ALRALARS ++IGRIEDVTP+PSDS
Sbjct: 66 DVAAKCKEVGITAVHIKIRATGGTRSKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDS 125
Query: 140 T 140
T
Sbjct: 126 T 126
>sp|P06367|RS14A_YEAST 40S ribosomal protein S14-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS14A PE=1 SV=5
Length = 137
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 97/121 (80%), Positives = 111/121 (91%)
Query: 20 QVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQ 79
Q ++ VFGVA I+ASFNDTFVHVTDLSG+ETIAR+TGGMKVKADRDE+SPYAAMLAAQ
Sbjct: 6 QARDNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQ 65
Query: 80 DVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDS 139
DVA KCK +GITA+H+K+RATGG RTKTPGPG Q+ALRALARS ++IGRIEDVTP+PSDS
Sbjct: 66 DVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDS 125
Query: 140 T 140
T
Sbjct: 126 T 126
>sp|P39516|RS14B_YEAST 40S ribosomal protein S14-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS14B PE=1 SV=2
Length = 138
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 97/121 (80%), Positives = 111/121 (91%)
Query: 20 QVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQ 79
Q ++ VFGVA I+ASFNDTFVHVTDLSG+ETIAR+TGGMKVKADRDE+SPYAAMLAAQ
Sbjct: 7 QARDNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQ 66
Query: 80 DVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDS 139
DVA KCK +GITA+H+K+RATGG RTKTPGPG Q+ALRALARS ++IGRIEDVTP+PSDS
Sbjct: 67 DVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDS 126
Query: 140 T 140
T
Sbjct: 127 T 127
>sp|Q96W53|RS14_CANAX 40S ribosomal protein S14 OS=Candida albicans GN=RPS14 PE=3 SV=1
Length = 134
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/114 (86%), Positives = 108/114 (94%)
Query: 27 VFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCK 86
VFGVA IFASFNDTFVHVTDLSG+ETIAR+TGGMKVKADRDE+SPYAAMLAAQDVA KCK
Sbjct: 10 VFGVARIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 69
Query: 87 TLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDST 140
+GITA+HIKLRATGG +TKTPGPG QSALRALARS ++IGRIEDVTP+PSDST
Sbjct: 70 EVGITAVHIKLRATGGTKTKTPGPGGQSALRALARSGLRIGRIEDVTPVPSDST 123
>sp|Q9XEK6|RS14_TORRU 40S ribosomal protein S14 OS=Tortula ruralis GN=RPS14 PE=2 SV=1
Length = 134
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/114 (86%), Positives = 107/114 (93%), Gaps = 1/114 (0%)
Query: 27 VFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCK 86
VFGVAHIFASFNDTFVHVTDLSG+ET +TGGMKVKADRDEASPYAAMLAAQDVA++CK
Sbjct: 11 VFGVAHIFASFNDTFVHVTDLSGKETSLVLTGGMKVKADRDEASPYAAMLAAQDVAQRCK 70
Query: 87 TLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDST 140
LGITALHI +RATGGN+TKTPGPGAQS LRALARS M+IGRIEDVTPIP+DST
Sbjct: 71 ELGITALHINVRATGGNKTKTPGPGAQS-LRALARSGMRIGRIEDVTPIPTDST 123
>sp|O14150|RS14_SCHPO 40S ribosomal protein S14 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps14a PE=1 SV=1
Length = 139
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/125 (80%), Positives = 115/125 (92%)
Query: 16 SLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAM 75
++GPQ++ GE VFGVAHIFASFNDTFVH+TDL+G+ETI R+TGGMKVK DRDE+SPYAAM
Sbjct: 4 NVGPQIRSGELVFGVAHIFASFNDTFVHITDLTGKETIVRVTGGMKVKTDRDESSPYAAM 63
Query: 76 LAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPI 135
LAAQD A KCK +GITALHIK+RATGG TKTPGPGAQ+ALRALAR+ M+IGRIEDVTPI
Sbjct: 64 LAAQDAAAKCKEVGITALHIKIRATGGTATKTPGPGAQAALRALARAGMRIGRIEDVTPI 123
Query: 136 PSDST 140
P+DST
Sbjct: 124 PTDST 128
>sp|P19800|RS14_TRYBB 40S ribosomal protein S14 OS=Trypanosoma brucei brucei GN=RPS14
PE=3 SV=1
Length = 144
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 111/133 (83%)
Query: 8 VQKEEVLVSLGPQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRD 67
+ K++ + G + + V+GV HI+ASFNDTFVHVTD+SGRET ++TGGMKVKADRD
Sbjct: 1 MSKKQEVKYYGSSAGKDQLVYGVVHIYASFNDTFVHVTDMSGRETFCKVTGGMKVKADRD 60
Query: 68 EASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIG 127
E+SPYAAM+AAQDV +CK GI ALH+K+RATGG TK+PGPGAQ+ALRALAR+ MKIG
Sbjct: 61 ESSPYAAMMAAQDVVARCKECGINALHVKMRATGGVGTKSPGPGAQAALRALARAGMKIG 120
Query: 128 RIEDVTPIPSDST 140
RIEDVTP+P+DST
Sbjct: 121 RIEDVTPVPTDST 133
>sp|A0B9L3|RS11_METTP 30S ribosomal protein S11 OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rps11 PE=3 SV=1
Length = 129
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 103/127 (81%)
Query: 25 EDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEK 84
E + +AHI++SFN+T + +TDL+G ETIA+I+GGM VKA RDE+SPY AM A VAE+
Sbjct: 3 EGKWAIAHIYSSFNNTLITITDLTGAETIAKISGGMVVKAARDESSPYTAMQMAMQVAEQ 62
Query: 85 CKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRKG 144
K GI +H+K+RA GGN+ ++PGPGAQ+A+RALAR+ ++IGRIEDVTPIP D T+ KG
Sbjct: 63 AKAKGIVGVHVKVRAPGGNKQRSPGPGAQAAIRALARAGLRIGRIEDVTPIPHDGTKPKG 122
Query: 145 GRRGRRL 151
G+RGRR+
Sbjct: 123 GKRGRRV 129
>sp|Q0W1V4|RS11_UNCMA 30S ribosomal protein S11 OS=Uncultured methanogenic archaeon RC-I
GN=rps11 PE=3 SV=1
Length = 132
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 104/133 (78%), Gaps = 5/133 (3%)
Query: 19 PQVKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAA 78
PQ K + +AHIF+SFN+T + VTDL+G ET+A+ +GGM VK DR+E+SPYAAM A
Sbjct: 5 PQFK-----WAIAHIFSSFNNTIITVTDLTGAETLAKTSGGMVVKQDRNESSPYAAMQMA 59
Query: 79 QDVAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSD 138
+VAE+ K GI +HI++RA GGN ++PGPGAQ+A+R+LAR+ ++IGRIEDVTPIP D
Sbjct: 60 MNVAEQIKAKGIQGVHIRVRAPGGNHQRSPGPGAQAAIRSLARAGLRIGRIEDVTPIPHD 119
Query: 139 STRRKGGRRGRRL 151
TR GG+RGRR+
Sbjct: 120 GTRAPGGKRGRRV 132
>sp|A6UW04|RS11_META3 30S ribosomal protein S11 OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rps11 PE=3 SV=1
Length = 124
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 95/120 (79%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+GV HI+AS+N+T +HVTD++G ETIA+I+GGM VK +DE+SPYAAM A +A+ +
Sbjct: 5 WGVIHIYASYNNTIIHVTDITGAETIAKISGGMIVKNQKDESSPYAAMQGAFKIADMIRE 64
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRKGGRR 147
GI +HIK+RATGG+++K PGPGAQ+A+RALAR+ +KIGRIED TPIP D T K G R
Sbjct: 65 KGIDKVHIKVRATGGSKSKNPGPGAQAAIRALARAGIKIGRIEDATPIPHDGTTPKKGNR 124
>sp|A2SSV8|RS11_METLZ 30S ribosomal protein S11 OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=rps11 PE=3 SV=1
Length = 131
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 94/121 (77%)
Query: 23 EGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVA 82
E + +G+AHIFASFN+T + VTDLSG ETI + +GGM VK R+E+SPYAAM A ++A
Sbjct: 3 EATEKWGIAHIFASFNNTIITVTDLSGAETICKSSGGMVVKQARNESSPYAAMQMAINIA 62
Query: 83 EKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRR 142
+ K GIT LHI++RA G R ++PGPGAQ+A+RAL+R+ M+IGRIEDVTP+P DS R
Sbjct: 63 QASKDKGITGLHIRVRAPGNGRQRSPGPGAQAAIRALSRAGMRIGRIEDVTPVPHDSIRA 122
Query: 143 K 143
K
Sbjct: 123 K 123
>sp|Q12ZR4|RS11_METBU 30S ribosomal protein S11 OS=Methanococcoides burtonii (strain DSM
6242) GN=rps11 PE=3 SV=1
Length = 126
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 95/121 (78%)
Query: 27 VFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCK 86
++GVAHI SFN+T + VTDL+G ETIA+ +GGM VKA RDE+SPY AM A +A+ +
Sbjct: 5 IWGVAHIKCSFNNTIITVTDLTGAETIAKSSGGMVVKAARDESSPYTAMQMATQLADILR 64
Query: 87 TLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRKGGR 146
G+ +HIK+RA GGN+ ++PGPGAQ+A+RA AR+ ++IGRIEDVTP+P D TR KGGR
Sbjct: 65 DKGLEGVHIKVRAPGGNKQRSPGPGAQAAIRAFARAGVRIGRIEDVTPVPHDGTRPKGGR 124
Query: 147 R 147
R
Sbjct: 125 R 125
>sp|Q8TRR0|RS11_METAC 30S ribosomal protein S11 OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rps11 PE=3
SV=1
Length = 126
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 95/120 (79%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+ VAHI +SFN+T + VTD++G ETIA+ +GGM VKA RDE+SPY AM A +A++ K
Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLKD 65
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRKGGRR 147
GI +HI++RA GGN+ ++PGPGAQ+A+RA AR+ ++IGRIEDVTP+P D TR KGGRR
Sbjct: 66 KGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGTRPKGGRR 125
>sp|Q2FT98|RS11_METHJ 30S ribosomal protein S11 OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=rps11 PE=3 SV=1
Length = 131
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 96/123 (78%)
Query: 21 VKEGEDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQD 80
+ EG++ +GVAHI+ASFN+T + VTDL+G ETI + +GGM VK DR+E+SPYAAM A +
Sbjct: 1 MSEGKEKWGVAHIYASFNNTIITVTDLTGAETITKSSGGMVVKQDRNESSPYAAMQMAGN 60
Query: 81 VAEKCKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDST 140
VA+ + GI LH+K+RA G + ++PGPGAQ+A+RALAR+ M+IG IEDVTP+P DS
Sbjct: 61 VAQAAREKGIVGLHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGLIEDVTPVPHDSI 120
Query: 141 RRK 143
R K
Sbjct: 121 RPK 123
>sp|Q8PV17|RS11_METMA 30S ribosomal protein S11 OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps11 PE=3 SV=1
Length = 126
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 95/120 (79%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+ VAHI +SFN+T + VTD++G ETIA+ +GGM VKA RDE+SPY AM A +A++ +
Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRD 65
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRKGGRR 147
GI +HI++RA GGN+ ++PGPGAQ+A+RA AR+ ++IGRIEDVTP+P D TR KGGRR
Sbjct: 66 KGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGTRPKGGRR 125
>sp|A3CWH8|RS11_METMJ 30S ribosomal protein S11 OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=rps11 PE=3 SV=1
Length = 129
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 92/115 (80%)
Query: 25 EDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEK 84
E+ +G+AHIFASFN+T + VTDLSG ET+ + +GGM VK DR+E+SPYAAM A VA+
Sbjct: 3 EEKWGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAIQVAQN 62
Query: 85 CKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDS 139
+ GIT +H+K+RA G + ++PGPGAQ+A+RALAR+ M+IGRIEDVTP+P DS
Sbjct: 63 ARDKGITGVHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDS 117
>sp|B6YSQ2|RS11_THEON 30S ribosomal protein S11 OS=Thermococcus onnurineus (strain NA1)
GN=rps11 PE=3 SV=1
Length = 139
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/116 (62%), Positives = 97/116 (83%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+GVAHI++S+N+T +H+TDL+G ET++R +GGM VKADRDE SPYAAM+AA+ AE+
Sbjct: 16 WGVAHIYSSYNNTIIHITDLTGAETVSRWSGGMVVKADRDEPSPYAAMIAAKRAAEEAME 75
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRK 143
G +HIK+RA GG+++KTPGPGAQ+A+RALAR+ ++IGR+EDVTPIP D TR K
Sbjct: 76 KGFVGVHIKVRAPGGSKSKTPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGTRPK 131
>sp|Q46GC9|RS11_METBF 30S ribosomal protein S11 OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rps11 PE=3 SV=1
Length = 126
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 95/120 (79%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+ VAHI +SFN+T + VTD++G ETIA+ +GGM VKA RDE+SPY AM A +A++ +
Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRD 65
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRKGGRR 147
GI +HI++RA GGN+ ++PGPGAQ+A+RA AR+ ++IGRIEDVTP+P D TR KGGRR
Sbjct: 66 KGIHGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGTRPKGGRR 125
>sp|Q18G55|RS11_HALWD 30S ribosomal protein S11 OS=Haloquadratum walsbyi (strain DSM
16790) GN=rps11 PE=3 SV=1
Length = 131
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/117 (60%), Positives = 89/117 (76%)
Query: 25 EDVFGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEK 84
E +GVAH+ ASFN+T + VTDL+G ETI + +GG VK +RDEASPYAAM A+ VAE
Sbjct: 8 EKRWGVAHVHASFNNTLITVTDLTGAETIVKSSGGAVVKQNRDEASPYAAMQMAESVAED 67
Query: 85 CKTLGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTR 141
K GI LH+++R GGN K+PGPGAQ+ +RALAR+ ++IGRIEDVTPIP D TR
Sbjct: 68 IKAAGIDGLHVRVRGPGGNGNKSPGPGAQATIRALARAGLEIGRIEDVTPIPHDGTR 124
>sp|A7IAH6|RS11_METB6 30S ribosomal protein S11 OS=Methanoregula boonei (strain 6A8)
GN=rps11 PE=3 SV=1
Length = 132
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 91/116 (78%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+G+AHIFASFN+T + VTDLSG ET+ + +GGM VK DR+E+SPYAAM A +VA +
Sbjct: 9 WGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAANVAAIARE 68
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRK 143
GI +H+K+RA G + ++PGPGAQ+A+RALAR+ M+IGRIEDVTP+P DS R K
Sbjct: 69 KGIVGVHVKVRAPGQGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDSCRPK 124
>sp|Q6LXM9|RS11_METMP 30S ribosomal protein S11 OS=Methanococcus maripaludis (strain S2 /
LL) GN=rps11 PE=3 SV=1
Length = 124
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 92/113 (81%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+G+ HI+AS+N+T +HVTDL+G ETIA+++GGM V+ RDE+SPYAAM AA +A+ +
Sbjct: 5 WGLVHIYASYNNTILHVTDLTGAETIAKVSGGMIVRNQRDESSPYAAMQAAFKIADLMRD 64
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDST 140
GI +H+K+RATGG ++K PGPGAQ+A+RAL+R+ ++IGRIED TPIP D T
Sbjct: 65 KGIDQVHVKVRATGGQKSKNPGPGAQAAIRALSRAGIRIGRIEDATPIPHDGT 117
>sp|A6VGQ8|RS11_METM7 30S ribosomal protein S11 OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=rps11 PE=3 SV=1
Length = 124
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 92/113 (81%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+G+ HI+AS+N+T +HVTDL+G ETIA+++GGM V+ RDE+SPYAAM AA +A+ +
Sbjct: 5 WGLVHIYASYNNTILHVTDLTGAETIAKVSGGMIVRNQRDESSPYAAMQAAFKIADLMRD 64
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDST 140
GI +H+K+RATGG ++K PGPGAQ+A+RAL+R+ ++IGRIED TPIP D T
Sbjct: 65 KGIDQVHVKVRATGGQKSKNPGPGAQAAIRALSRAGIRIGRIEDATPIPHDGT 117
>sp|A4FWL3|RS11_METM5 30S ribosomal protein S11 OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rps11 PE=3 SV=1
Length = 124
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 92/113 (81%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+G+ HI+AS+N+T +HVTDL+G ETIA+++GGM V+ RDE+SPYAAM AA +A+ +
Sbjct: 5 WGLVHIYASYNNTILHVTDLTGAETIAKVSGGMIVRNQRDESSPYAAMQAAFKIADLMRD 64
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDST 140
GI +H+K+RATGG ++K PGPGAQ+A+RAL+R+ ++IGRIED TPIP D T
Sbjct: 65 KGIDQVHVKVRATGGQKSKNPGPGAQAAIRALSRAGIRIGRIEDATPIPHDGT 117
>sp|A6UPW6|RS11_METVS 30S ribosomal protein S11 OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rps11 PE=3 SV=1
Length = 124
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 92/116 (79%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+G+ HI+AS+N+T +HVTD++G ETIA+++GGM V+ RDE+SPYAAM AA +AE +
Sbjct: 5 WGLVHIYASYNNTILHVTDVTGAETIAKVSGGMIVRNQRDESSPYAAMQAAFKIAELMRD 64
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRK 143
GI +H+K+RA GG ++K PGPGAQ+A+RAL+R+ +KIGRIED TPIP D T K
Sbjct: 65 KGIDQVHVKVRAAGGQKSKNPGPGAQAAIRALSRAGIKIGRIEDATPIPHDGTTPK 120
>sp|Q8U0E3|RS11_PYRFU 30S ribosomal protein S11 OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rps11 PE=1 SV=1
Length = 137
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 98/116 (84%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+G+AHI++SFN+T +H+TD++G ETI+R +GGM VKADRDE SPYAAMLAA+ AE+
Sbjct: 14 WGIAHIYSSFNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRK 143
GI +HI++RA GG+++KTPGPGAQ+A+RALAR+ +KIGR+EDVTPIP D TR K
Sbjct: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPK 129
>sp|Q5JJF3|RS11_PYRKO 30S ribosomal protein S11 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps11 PE=3 SV=1
Length = 140
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 99/116 (85%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+GVAHI++S+N+T +H+TDL+G ETI+R +GGM VKADRDE SPYAAM+AA+ AE+
Sbjct: 17 WGVAHIYSSYNNTIIHITDLTGAETISRWSGGMVVKADRDEPSPYAAMIAARRAAEEAME 76
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRK 143
GIT +HIK+RA GG+++K+PGPGAQ+A+RAL+R+ ++IGR+EDVTPIP D TR K
Sbjct: 77 KGITGVHIKVRAPGGSKSKSPGPGAQAAIRALSRAGLRIGRVEDVTPIPHDGTRPK 132
>sp|C6A1B2|RS11_THESM 30S ribosomal protein S11 OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=rps11 PE=3 SV=1
Length = 139
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 98/116 (84%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+GVAHI+AS+N+T +H+TDL+G ETI++ +GGM VKADRDE+SPYAAM+AA+ AE+
Sbjct: 16 WGVAHIYASYNNTIIHITDLTGAETISKWSGGMVVKADRDESSPYAAMIAARRAAEEAME 75
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRK 143
GI +HIK+RA GG+++K PGPGAQ+A+RALAR+ ++IGR+EDVTPIP D TR K
Sbjct: 76 KGINGVHIKVRAPGGSKSKNPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGTRPK 131
>sp|P62011|RS11_PYRHO 30S ribosomal protein S11 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps11 PE=3 SV=1
Length = 137
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 98/116 (84%)
Query: 28 FGVAHIFASFNDTFVHVTDLSGRETIARITGGMKVKADRDEASPYAAMLAAQDVAEKCKT 87
+G+AHI++S+N+T +H+TD++G ETI+R +GGM VKADRDE SPYAAMLAA+ AE+
Sbjct: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
Query: 88 LGITALHIKLRATGGNRTKTPGPGAQSALRALARSNMKIGRIEDVTPIPSDSTRRK 143
GI +HI++RA GG+++KTPGPGAQ+A+RALAR+ +KIGR+EDVTPIP D TR K
Sbjct: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPK 129
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,392,354
Number of Sequences: 539616
Number of extensions: 2103903
Number of successful extensions: 7610
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5523
Number of HSP's gapped (non-prelim): 997
length of query: 151
length of database: 191,569,459
effective HSP length: 107
effective length of query: 44
effective length of database: 133,830,547
effective search space: 5888544068
effective search space used: 5888544068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)