Your job contains 1 sequence.
>psy3233
MSIEKLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASV
QSKCLLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3233
(116 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0026430 - symbol:Grip84 "gamma-tubulin ring protei... 193 4.6e-14 1
ZFIN|ZDB-GENE-031118-150 - symbol:tubgcp2 "tubulin, gamma... 193 4.8e-14 1
UNIPROTKB|Q5ZKY5 - symbol:TUBGCP2 "Uncharacterized protei... 183 5.8e-13 1
UNIPROTKB|B3KTU7 - symbol:TUBGCP2 "Gamma-tubulin complex ... 176 1.3e-12 1
UNIPROTKB|E1BZL5 - symbol:TUBGCP2 "Uncharacterized protei... 178 2.0e-12 1
UNIPROTKB|E1C2Y1 - symbol:TUBGCP2 "Uncharacterized protei... 178 2.0e-12 1
UNIPROTKB|F2Z2B9 - symbol:TUBGCP2 "Gamma-tubulin complex ... 176 2.4e-12 1
UNIPROTKB|Q9BSJ2 - symbol:TUBGCP2 "Gamma-tubulin complex ... 176 3.3e-12 1
UNIPROTKB|J9P5U2 - symbol:TUBGCP2 "Uncharacterized protei... 169 1.3e-11 1
MGI|MGI:1921487 - symbol:Tubgcp2 "tubulin, gamma complex ... 170 1.4e-11 1
RGD|1309597 - symbol:Tubgcp2 "tubulin, gamma complex asso... 170 1.4e-11 1
ASPGD|ASPL0000000454 - symbol:gcpB species:162425 "Emeric... 164 6.0e-11 1
UNIPROTKB|A5D7P5 - symbol:TUBGCP2 "Uncharacterized protei... 158 2.8e-10 1
DICTYBASE|DDB_G0285849 - symbol:spc97 "spindle pole body ... 122 4.4e-10 2
POMBASE|SPBC365.15 - symbol:alp4 "gamma tubulin complex S... 148 2.7e-09 1
TAIR|locus:2178930 - symbol:AT5G17410 species:3702 "Arabi... 147 2.8e-09 1
UNIPROTKB|F1SCV1 - symbol:TUBGCP2 "Uncharacterized protei... 146 5.3e-09 1
UNIPROTKB|G4MT50 - symbol:MGG_07129 "Spindle pole body co... 145 7.2e-09 1
CGD|CAL0001707 - symbol:orf19.708 species:5476 "Candida a... 115 1.0e-05 1
FB|FBgn0035800 - symbol:CG7716 species:7227 "Drosophila m... 104 0.00012 1
>FB|FBgn0026430 [details] [associations]
symbol:Grip84 "gamma-tubulin ring protein 84" species:7227
"Drosophila melanogaster" [GO:0015631 "tubulin binding"
evidence=NAS] [GO:0072686 "mitotic spindle" evidence=IDA]
[GO:0008275 "gamma-tubulin small complex" evidence=NAS;IDA;IPI]
[GO:0005813 "centrosome" evidence=IDA] [GO:0007020 "microtubule
nucleation" evidence=IDA] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0007017 "microtubule-based process" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=ISS]
[GO:0051011 "microtubule minus-end binding" evidence=IDA]
[GO:0043015 "gamma-tubulin binding" evidence=IDA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0051225 "spindle assembly"
evidence=IMP] [GO:0030953 "astral microtubule organization"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] InterPro:IPR007259
Pfam:PF04130 GO:GO:0007126 GO:GO:0005875 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0051297 EMBL:AE014298
GO:GO:0007283 GO:GO:0051726 GO:GO:0008017 GO:GO:0000922
GO:GO:0005874 eggNOG:NOG268971 KO:K16569 GO:GO:0007020
PANTHER:PTHR19302 GO:GO:0030953 GO:GO:0043015 GO:GO:0008275
EMBL:AF118379 EMBL:AY061148 RefSeq:NP_523409.1 RefSeq:NP_728265.1
UniGene:Dm.2809 MINT:MINT-345392 STRING:Q9XYP7 PaxDb:Q9XYP7
EnsemblMetazoa:FBtr0074776 GeneID:32946 KEGG:dme:Dmel_CG3917
CTD:32946 FlyBase:FBgn0026430 GeneTree:ENSGT00530000063146
InParanoid:Q9XYP7 OrthoDB:EOG41NS23 GenomeRNAi:32946 NextBio:781175
Bgee:Q9XYP7 GermOnline:CG3917 Uniprot:Q9XYP7
Length = 852
Score = 193 (73.0 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 4 EKLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSK 63
E + D L YS+DYW +RY +++E +PSFL DKILRTGKYLNVIR+C K
Sbjct: 401 EVIHRDELPEHYSDDYWERRYTLRDEQ-IPSFLAKYSDKILRTGKYLNVIRQC-----GK 454
Query: 64 CLLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
++ Q +++ + T + +I++AY+FA+ LL +L+ + DL+ ++
Sbjct: 455 RVMPTQEMN---LEF-DPTSERHVSVINDAYYFAARMLLDVLLTENDLMGHLQ 503
>ZFIN|ZDB-GENE-031118-150 [details] [associations]
symbol:tubgcp2 "tubulin, gamma complex associated
protein 2" species:7955 "Danio rerio" [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR007259 Pfam:PF04130 ZFIN:ZDB-GENE-031118-150
GO:GO:0000226 GO:GO:0005815 GO:GO:0000922 eggNOG:NOG268971
KO:K16569 PANTHER:PTHR19302 CTD:10844 HOGENOM:HOG000273895
HOVERGEN:HBG026103 OrthoDB:EOG4KSPJ2 EMBL:BC054908 IPI:IPI00503161
RefSeq:NP_956416.1 UniGene:Dr.77414 STRING:Q7SYD6 PRIDE:Q7SYD6
GeneID:386975 KEGG:dre:386975 InParanoid:Q7SYD6 NextBio:20814097
ArrayExpress:Q7SYD6 Bgee:Q7SYD6 Uniprot:Q7SYD6
Length = 882
Score = 193 (73.0 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 44/112 (39%), Positives = 68/112 (60%)
Query: 5 KLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKC 64
+L+ + + Y++ YW QRY I + +PSFL+ + DKIL TGKYLNV+R+C V C
Sbjct: 413 ELQKEKIQEDYNDKYWDQRYTIV-QHRIPSFLQKMADKILNTGKYLNVVRECGRDVT--C 469
Query: 65 LLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
A E+ Y + A + I++AY++AS LL LM++ +LV+R+R
Sbjct: 470 ------PDAKEVLYTLK-ERAYVEQIEKAYYYASKVLLDFLMEEKELVSRLR 514
>UNIPROTKB|Q5ZKY5 [details] [associations]
symbol:TUBGCP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] InterPro:IPR007259
Pfam:PF04130 GO:GO:0000226 GO:GO:0005815 GO:GO:0000922
eggNOG:NOG268971 KO:K16569 PANTHER:PTHR19302
GeneTree:ENSGT00530000063146 CTD:10844 HOGENOM:HOG000273895
HOVERGEN:HBG026103 EMBL:AADN02035182 EMBL:AADN02035183
EMBL:AJ719949 IPI:IPI00822342 RefSeq:NP_001006496.1
UniGene:Gga.22365 STRING:Q5ZKY5 Ensembl:ENSGALT00000040987
GeneID:423673 KEGG:gga:423673 NextBio:20826109 Uniprot:Q5ZKY5
Length = 895
Score = 183 (69.5 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 42/112 (37%), Positives = 67/112 (59%)
Query: 5 KLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKC 64
+L+ + + Y++ YW QRY + + +PSFL+ + DKIL TGKYLNV+R+C V C
Sbjct: 413 ELQKEKIQEDYNDKYWDQRYTVVQQQ-IPSFLQKMADKILSTGKYLNVVRECGRDVT--C 469
Query: 65 LLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
+ K E+ Y + A + I++AY++AS LL LM++ +LV +R
Sbjct: 470 PVAK------EVIYTLK-ERAYVEQIEKAYNYASKVLLDFLMEEKELVAHLR 514
>UNIPROTKB|B3KTU7 [details] [associations]
symbol:TUBGCP2 "Gamma-tubulin complex component 2"
species:9606 "Homo sapiens" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR007259 Pfam:PF04130 GO:GO:0005634 GO:GO:0005813
GO:GO:0000226 EMBL:AL592071 GO:GO:0000922 PANTHER:PTHR19302
EMBL:AL360181 IPI:IPI01008898 UniGene:Hs.523370 HGNC:HGNC:18599
ChiTaRS:TUBGCP2 EMBL:AK096087 STRING:B3KTU7 Ensembl:ENST00000368562
Uniprot:B3KTU7
Length = 495
Score = 176 (67.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 42/112 (37%), Positives = 66/112 (58%)
Query: 5 KLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKC 64
+L + + Y++ YW QRY I + +PSFL+ + DKIL TGKYLNV+R+C V C
Sbjct: 6 ELRKERIQEDYNDKYWDQRYTIVQQQ-IPSFLQKMADKILSTGKYLNVVRECGHDVT--C 62
Query: 65 LLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
+ K E+ Y + A + I++A+++AS LL LM++ +LV +R
Sbjct: 63 PVAK------EIIYTLK-ERAYVEQIEKAFNYASKVLLDFLMEEKELVAHLR 107
>UNIPROTKB|E1BZL5 [details] [associations]
symbol:TUBGCP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] InterPro:IPR007259
Pfam:PF04130 GO:GO:0000226 GO:GO:0005815 GO:GO:0000922
PANTHER:PTHR19302 GeneTree:ENSGT00530000063146 EMBL:AADN02035182
EMBL:AADN02035183 IPI:IPI00571270 Ensembl:ENSGALT00000005580
ArrayExpress:E1BZL5 Uniprot:E1BZL5
Length = 906
Score = 178 (67.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 41/108 (37%), Positives = 65/108 (60%)
Query: 5 KLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKC 64
+L+ + + Y++ YW QRY + + +PSFL+ + DKIL TGKYLNV+R+C V C
Sbjct: 413 ELQKEKIQEDYNDKYWDQRYTVVQQQ-IPSFLQKMADKILSTGKYLNVVRECGRDVT--C 469
Query: 65 LLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLV 112
+ K E+ Y + A + I++AY++AS LL LM++ +LV
Sbjct: 470 PVAK------EVIYTLK-ERAYVEQIEKAYNYASKVLLDFLMEEKELV 510
>UNIPROTKB|E1C2Y1 [details] [associations]
symbol:TUBGCP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
InterPro:IPR007259 Pfam:PF04130 GO:GO:0005813 GO:GO:0000226
GO:GO:0000922 PANTHER:PTHR19302 GeneTree:ENSGT00530000063146
OMA:VYERPAL EMBL:AADN02035182 EMBL:AADN02035183 IPI:IPI00819068
Ensembl:ENSGALT00000040991 ArrayExpress:E1C2Y1 Uniprot:E1C2Y1
Length = 906
Score = 178 (67.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 41/108 (37%), Positives = 65/108 (60%)
Query: 5 KLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKC 64
+L+ + + Y++ YW QRY + + +PSFL+ + DKIL TGKYLNV+R+C V C
Sbjct: 413 ELQKEKIQEDYNDKYWDQRYTVVQQQ-IPSFLQKMADKILSTGKYLNVVRECGRDVT--C 469
Query: 65 LLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLV 112
+ K E+ Y + A + I++AY++AS LL LM++ +LV
Sbjct: 470 PVAK------EVIYTLK-ERAYVEQIEKAYNYASKVLLDFLMEEKELV 510
>UNIPROTKB|F2Z2B9 [details] [associations]
symbol:TUBGCP2 "Gamma-tubulin complex component 2"
species:9606 "Homo sapiens" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] InterPro:IPR007259 Pfam:PF04130 GO:GO:0000226
GO:GO:0005815 EMBL:AL592071 GO:GO:0000922 PANTHER:PTHR19302
EMBL:AL360181 HGNC:HGNC:18599 ChiTaRS:TUBGCP2 IPI:IPI00980579
ProteinModelPortal:F2Z2B9 Ensembl:ENST00000482278
ArrayExpress:F2Z2B9 Bgee:F2Z2B9 Uniprot:F2Z2B9
Length = 721
Score = 176 (67.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 42/112 (37%), Positives = 66/112 (58%)
Query: 5 KLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKC 64
+L + + Y++ YW QRY I + +PSFL+ + DKIL TGKYLNV+R+C V C
Sbjct: 413 ELRKERIQEDYNDKYWDQRYTIVQQQ-IPSFLQKMADKILSTGKYLNVVRECGHDVT--C 469
Query: 65 LLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
+ K E+ Y + A + I++A+++AS LL LM++ +LV +R
Sbjct: 470 PVAK------EIIYTLK-ERAYVEQIEKAFNYASKVLLDFLMEEKELVAHLR 514
>UNIPROTKB|Q9BSJ2 [details] [associations]
symbol:TUBGCP2 "Gamma-tubulin complex component 2"
species:9606 "Homo sapiens" [GO:0000922 "spindle pole"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005815 "microtubule
organizing center" evidence=TAS] [GO:0005881 "cytoplasmic
microtubule" evidence=TAS] [GO:0006461 "protein complex assembly"
evidence=TAS] [GO:0007020 "microtubule nucleation" evidence=TAS]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR007259
Pfam:PF04130 EMBL:AF042379 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 Reactome:REACT_115566 GO:GO:0000086 GO:GO:0006461
EMBL:AL592071 GO:GO:0000922 eggNOG:NOG268971 KO:K16569
GO:GO:0007020 PANTHER:PTHR19302 GO:GO:0005881 EMBL:AL360181
EMBL:AK297251 EMBL:BC005011 EMBL:BC093770 EMBL:BC111957
EMBL:BC143247 IPI:IPI00029705 IPI:IPI00922855 IPI:IPI01008898
RefSeq:NP_001243547.1 RefSeq:NP_006650.1 UniGene:Hs.523370
ProteinModelPortal:Q9BSJ2 IntAct:Q9BSJ2 MINT:MINT-1152554
STRING:Q9BSJ2 PhosphoSite:Q9BSJ2 DMDM:21450889 PaxDb:Q9BSJ2
PRIDE:Q9BSJ2 Ensembl:ENST00000252936 Ensembl:ENST00000368563
Ensembl:ENST00000417178 Ensembl:ENST00000543663 GeneID:10844
KEGG:hsa:10844 UCSC:uc001lmf.1 CTD:10844 GeneCards:GC10M135094
HGNC:HGNC:18599 HPA:HPA037885 neXtProt:NX_Q9BSJ2 PharmGKB:PA38598
HOGENOM:HOG000273895 HOVERGEN:HBG026103 InParanoid:Q9BSJ2
OrthoDB:EOG4KSPJ2 PhylomeDB:Q9BSJ2 ChiTaRS:TUBGCP2 GenomeRNAi:10844
NextBio:41170 ArrayExpress:Q9BSJ2 Bgee:Q9BSJ2 CleanEx:HS_TUBGCP2
Genevestigator:Q9BSJ2 GermOnline:ENSG00000130640 Uniprot:Q9BSJ2
Length = 902
Score = 176 (67.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 42/112 (37%), Positives = 66/112 (58%)
Query: 5 KLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKC 64
+L + + Y++ YW QRY I + +PSFL+ + DKIL TGKYLNV+R+C V C
Sbjct: 413 ELRKERIQEDYNDKYWDQRYTIVQQQ-IPSFLQKMADKILSTGKYLNVVRECGHDVT--C 469
Query: 65 LLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
+ K E+ Y + A + I++A+++AS LL LM++ +LV +R
Sbjct: 470 PVAK------EIIYTLK-ERAYVEQIEKAFNYASKVLLDFLMEEKELVAHLR 514
>UNIPROTKB|J9P5U2 [details] [associations]
symbol:TUBGCP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
InterPro:IPR007259 Pfam:PF04130 GO:GO:0000226 GO:GO:0005815
GO:GO:0000922 PANTHER:PTHR19302 GeneTree:ENSGT00530000063146
OMA:VYERPAL EMBL:AAEX03015734 Ensembl:ENSCAFT00000043376
Uniprot:J9P5U2
Length = 704
Score = 169 (64.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 40/113 (35%), Positives = 67/113 (59%)
Query: 5 KLENDVLDGKYSEDYWVQRY-IIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSK 63
+L + + Y++ YW QRY ++Q + +PSFL+ + K+L TGKYLNV+R+C V
Sbjct: 212 ELRKEKIQEDYNDKYWDQRYTVVQRQ--IPSFLQKMAGKVLSTGKYLNVVRECGHDVT-- 267
Query: 64 CLLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
C + K E+ Y + A + I++A+++AS LL LM++ +LV +R
Sbjct: 268 CPVAK------EIIYTLK-ERAYVEQIEKAFNYASKVLLAFLMEEKELVAHLR 313
>MGI|MGI:1921487 [details] [associations]
symbol:Tubgcp2 "tubulin, gamma complex associated protein 2"
species:10090 "Mus musculus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR007259 Pfam:PF04130 MGI:MGI:1921487
GO:GO:0005737 GO:GO:0000226 GO:GO:0005815 EMBL:CH466531
GO:GO:0000922 GO:GO:0005874 eggNOG:NOG268971 KO:K16569
PANTHER:PTHR19302 GeneTree:ENSGT00530000063146 CTD:10844
HOGENOM:HOG000273895 HOVERGEN:HBG026103 OrthoDB:EOG4KSPJ2
EMBL:AC107822 EMBL:AC109205 EMBL:BC012519 EMBL:BC025582
IPI:IPI00121787 RefSeq:NP_598516.2 UniGene:Mm.40888
ProteinModelPortal:Q921G8 IntAct:Q921G8 STRING:Q921G8
PhosphoSite:Q921G8 PaxDb:Q921G8 PRIDE:Q921G8
Ensembl:ENSMUST00000026547 GeneID:74237 KEGG:mmu:74237
InParanoid:Q921G8 OMA:VYERPAL NextBio:340196 CleanEx:MM_TUBGCP2
Genevestigator:Q921G8 GermOnline:ENSMUSG00000025474 Uniprot:Q921G8
Length = 905
Score = 170 (64.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 41/112 (36%), Positives = 65/112 (58%)
Query: 5 KLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKC 64
+L + + Y++ YW QRY + + +PSFL+ V KIL TGKYLNV+R+C V C
Sbjct: 413 ELRKEKIQEDYNDKYWDQRYTVLPQQ-IPSFLQKVAGKILSTGKYLNVVRECGHDVT--C 469
Query: 65 LLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
+ K E+ Y + A + I++A+++AS LL LM++ +LV +R
Sbjct: 470 PVAK------EIIYTLK-ERAYVEQIEKAFNYASKVLLDFLMEEKELVAHLR 514
>RGD|1309597 [details] [associations]
symbol:Tubgcp2 "tubulin, gamma complex associated protein 2"
species:10116 "Rattus norvegicus" [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR007259
Pfam:PF04130 RGD:1309597 GO:GO:0005813 GO:GO:0000226 GO:GO:0006508
GO:GO:0008237 GO:GO:0007229 GO:GO:0000922 eggNOG:NOG268971
KO:K16569 PANTHER:PTHR19302 EMBL:CH473953
GeneTree:ENSGT00530000063146 CTD:10844 HOGENOM:HOG000273895
HOVERGEN:HBG026103 OrthoDB:EOG4KSPJ2 OMA:VYERPAL EMBL:BC166857
IPI:IPI00360140 RefSeq:NP_001101030.1 UniGene:Rn.138249
MINT:MINT-7138097 STRING:B2RYP8 Ensembl:ENSRNOT00000024573
GeneID:309098 KEGG:rno:309098 UCSC:RGD:1309597 NextBio:660116
Genevestigator:B2RYP8 Uniprot:B2RYP8
Length = 905
Score = 170 (64.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 41/112 (36%), Positives = 65/112 (58%)
Query: 5 KLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKC 64
+L + + Y++ YW QRY + + +PSFL+ V KIL TGKYLNV+R+C V C
Sbjct: 413 ELRKEKIQEDYNDKYWDQRYTVLPQQ-IPSFLQKVAGKILSTGKYLNVVRECGHDVT--C 469
Query: 65 LLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
+ K E+ Y + A + I++A+++AS LL LM++ +LV +R
Sbjct: 470 PVAK------EIIYTLK-ERAYVEQIEKAFNYASKVLLDFLMEEKELVAHLR 514
>ASPGD|ASPL0000000454 [details] [associations]
symbol:gcpB species:162425 "Emericella nidulans"
[GO:0005816 "spindle pole body" evidence=IDA] [GO:0043015
"gamma-tubulin binding" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0071963 "establishment or maintenance of cell
polarity regulating cell shape" evidence=IEA] [GO:0007094 "mitotic
spindle assembly checkpoint" evidence=IEA] [GO:0030473 "nuclear
migration along microtubule" evidence=IEA] [GO:0034631 "microtubule
anchoring at spindle pole body" evidence=IEA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=IEA]
[GO:0090307 "spindle assembly involved in mitosis" evidence=IEA]
[GO:0033566 "gamma-tubulin complex localization" evidence=IEA]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA] [GO:0060630
"regulation of M/G1 transition of mitotic cell cycle" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044732 "mitotic spindle
pole body" evidence=IEA] [GO:0000923 "equatorial microtubule
organizing center" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR007259 Pfam:PF04130 GO:GO:0000226
GO:GO:0005815 EMBL:BN001301 GO:GO:0000922 OMA:DELMQDH
PANTHER:PTHR19302 EnsemblFungi:CADANIAT00007165 Uniprot:C8UZY3
Length = 875
Score = 164 (62.8 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 41/113 (36%), Positives = 66/113 (58%)
Query: 4 EKLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSK 63
EKLE D Y+++YW +RY I+ ++ VP L+ V+DK+L GKYLNV+R+C SK
Sbjct: 415 EKLEED-----YTDEYWEKRYTIR-DNEVPPQLDSVRDKVLLAGKYLNVVRECGGVDVSK 468
Query: 64 CLLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
+ D + + +++E+ ++ AY +A++SLL LL+ L R R
Sbjct: 469 AVKDVPKT-FDDPRFLEN--------VNAAYTYANASLLNLLLTKNSLTTRFR 512
>UNIPROTKB|A5D7P5 [details] [associations]
symbol:TUBGCP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
InterPro:IPR007259 Pfam:PF04130 GO:GO:0005813 GO:GO:0000226
GO:GO:0000922 eggNOG:NOG268971 KO:K16569 PANTHER:PTHR19302
GeneTree:ENSGT00530000063146 CTD:10844 HOGENOM:HOG000273895
HOVERGEN:HBG026103 OrthoDB:EOG4KSPJ2 OMA:VYERPAL EMBL:DAAA02059086
EMBL:BC140635 IPI:IPI00690544 RefSeq:NP_001091618.1
UniGene:Bt.36152 STRING:A5D7P5 Ensembl:ENSBTAT00000008383
GeneID:781376 KEGG:bta:781376 InParanoid:A5D7P5 NextBio:20924792
Uniprot:A5D7P5
Length = 905
Score = 158 (60.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 38/112 (33%), Positives = 63/112 (56%)
Query: 5 KLENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKC 64
+L + + Y++ YW RY + + ++PSFL+ + K+L TGKYLNV+R+C V C
Sbjct: 413 ELRKEKIQEDYNDKYWELRYTVV-QRHIPSFLQKMAGKVLSTGKYLNVVRECGHDVT--C 469
Query: 65 LLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
A E+ Y + A + I++A+ +AS LL LM++ +LV +R
Sbjct: 470 ------PAAKEVIYTLK-ERAYVEQIEKAFGYASKVLLGFLMEEKELVAHLR 514
>DICTYBASE|DDB_G0285849 [details] [associations]
symbol:spc97 "spindle pole body component 97"
species:44689 "Dictyostelium discoideum" [GO:0043015 "gamma-tubulin
binding" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR007259 Pfam:PF04130
dictyBase:DDB_G0285849 GO:GO:0005737 GO:GO:0005813 GO:GO:0000226
GenomeReviews:CM000153_GR EMBL:AAFI02000082 GO:GO:0000922
GO:GO:0005874 eggNOG:NOG268971 KO:K16569 PANTHER:PTHR19302
EMBL:AJ318508 RefSeq:XP_637962.1 EnsemblProtists:DDB0191247
GeneID:8625315 KEGG:ddi:DDB_G0285849 OMA:VIRIHND Uniprot:Q95ZG3
Length = 1335
Score = 122 (48.0 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 6 LENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSK 63
L+ D ++ +++ YW QRY I+ + +P +L+ KIL TGKYLNV+R+C S+ +
Sbjct: 632 LKRDNINRDFNDLYWEQRYQIRQDQ-IPKYLQSHALKILTTGKYLNVVRECNQSISQQ 688
Score = 63 (27.2 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 13/41 (31%), Positives = 28/41 (68%)
Query: 76 MKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
++Y ++ ++ I I++AY +AS LL LL+ + L++R++
Sbjct: 741 IEYSKN-ENVYIDKIEKAYDYASGILLNLLINERHLISRLK 780
Score = 32 (16.3 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 78 YMESTDSALIRMIDEAYHFASSSLLTLLMQ 107
+M++T L + +D+ +SLL L ++
Sbjct: 797 FMDTTYDELKKPLDQINMVKMNSLLQLSLR 826
>POMBASE|SPBC365.15 [details] [associations]
symbol:alp4 "gamma tubulin complex Spc97/GCP2 subunit
Alp4" species:4896 "Schizosaccharomyces pombe" [GO:0000923
"equatorial microtubule organizing center" evidence=IDA]
[GO:0000930 "gamma-tubulin complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005816 "spindle pole body" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005874 "microtubule" evidence=IEA] [GO:0007020
"microtubule nucleation" evidence=IC] [GO:0007094 "mitotic spindle
assembly checkpoint" evidence=IMP] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0030473
"nuclear migration along microtubule" evidence=IMP] [GO:0031122
"cytoplasmic microtubule organization" evidence=IMP] [GO:0032153
"cell division site" evidence=IDA] [GO:0033205 "cell cycle
cytokinesis" evidence=IMP] [GO:0033566 "gamma-tubulin complex
localization" evidence=IMP] [GO:0034631 "microtubule anchoring at
spindle pole body" evidence=IMP] [GO:0044732 "mitotic spindle pole
body" evidence=IDA] [GO:0060630 "regulation of M/G1 transition of
mitotic cell cycle" evidence=IMP] [GO:0071963 "establishment or
maintenance of cell polarity regulating cell shape" evidence=IMP]
[GO:0090307 "spindle assembly involved in mitosis" evidence=IMP]
InterPro:IPR007259 Pfam:PF04130 PomBase:SPBC365.15 GO:GO:0005829
GO:GO:0005634 GO:GO:0007094 GO:GO:0044732 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0071963 GO:GO:0033205 GO:GO:0005874
GO:GO:0031122 GO:GO:0090307 GO:GO:0000923 GO:GO:0000930
EMBL:AB026664 PIR:T43510 RefSeq:NP_596044.1 IntAct:Q9Y705
STRING:Q9Y705 EnsemblFungi:SPBC365.15.1 GeneID:2540392
KEGG:spo:SPBC365.15 eggNOG:NOG268971 HOGENOM:HOG000163983 KO:K16569
OMA:DELMQDH OrthoDB:EOG4K0TWG NextBio:20801519 GO:GO:0000917
GO:GO:0033566 GO:GO:0034631 GO:GO:0007020 GO:GO:0030473
GO:GO:0010389 GO:GO:0060630 PANTHER:PTHR19302 Uniprot:Q9Y705
Length = 784
Score = 148 (57.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 34/102 (33%), Positives = 57/102 (55%)
Query: 11 LDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKCLLDKQR 70
LD Y+++YW +RY+I+ E VP L +++K+L GKYLNV+ +C+ V + L+ +
Sbjct: 323 LDEDYTDEYWEKRYVIR-EDQVPPQLLDLQNKVLFAGKYLNVVLECRKGVNNLASLNAKD 381
Query: 71 QRAAEMKYMESTDSALIRM-IDEAYHFASSSLLTLLMQDYDL 111
++ + + D + I AY +A+ SLL LL L
Sbjct: 382 DTQNQLLWPSTFDDDNFTLNIMNAYVYANESLLQLLQSSQSL 423
>TAIR|locus:2178930 [details] [associations]
symbol:AT5G17410 species:3702 "Arabidopsis thaliana"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005815 "microtubule organizing center"
evidence=IEA] InterPro:IPR007259 Pfam:PF04130 EMBL:CP002688
GO:GO:0000226 GO:GO:0005815 GO:GO:0000922 KO:K16569
PANTHER:PTHR19302 UniGene:At.25558 UniGene:At.71017 IPI:IPI00535053
RefSeq:NP_850838.1 PRIDE:F4KGZ8 EnsemblPlants:AT5G17410.2
GeneID:831607 KEGG:ath:AT5G17410 OMA:LLDYQAM Uniprot:F4KGZ8
Length = 679
Score = 147 (56.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 37/111 (33%), Positives = 59/111 (53%)
Query: 6 LENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKCL 65
L+ + L + YW QRY +++ +P FL ++ IL TGKYLNV+R+C +VQ
Sbjct: 267 LKKESLSQDSTAKYWSQRYSLKD--TIPGFLANIAATILTTGKYLNVMRECGHNVQVPI- 323
Query: 66 LDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
+R + + ++ + I A+ FAS L+ L+ YDLV R+R
Sbjct: 324 --SERSKLT----IFGSNHHYLECIKAAHEFASIELVNLIKDKYDLVGRLR 368
>UNIPROTKB|F1SCV1 [details] [associations]
symbol:TUBGCP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
InterPro:IPR007259 Pfam:PF04130 GO:GO:0005813 GO:GO:0000226
GO:GO:0000922 PANTHER:PTHR19302 GeneTree:ENSGT00530000063146
OMA:VYERPAL EMBL:CU468487 Ensembl:ENSSSCT00000011787 Uniprot:F1SCV1
Length = 906
Score = 146 (56.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 38/114 (33%), Positives = 65/114 (57%)
Query: 5 KLENDVLDGKYSEDYWVQRY-IIQNESNVPSFLEHVKDKILRTGKYLNVI-RKCKASVQS 62
+L + + Y++ YW QRY ++Q + +PSFL+ + K+L TGKYL+V+ R+C V
Sbjct: 413 ELRKEKIQEDYNDKYWDQRYTVVQRQ--IPSFLQKMAGKVLSTGKYLDVVVRECGHDVT- 469
Query: 63 KCLLDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
C + K E+ Y + A + I++A+ +AS LL LM + +L+ +R
Sbjct: 470 -CPVAK------EVVYTLK-ERAYVEQIEKAFSYASKVLLDFLMGEKELLAHLR 515
>UNIPROTKB|G4MT50 [details] [associations]
symbol:MGG_07129 "Spindle pole body component"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007259 Pfam:PF04130
GO:GO:0000226 GO:GO:0005815 GO:GO:0000922 KO:K16569
PANTHER:PTHR19302 EMBL:CM001232 RefSeq:XP_003715322.1
EnsemblFungi:MGG_07129T0 GeneID:2683251 KEGG:mgr:MGG_07129
Uniprot:G4MT50
Length = 951
Score = 145 (56.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 6 LENDVLDGKYSEDYWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKCL 65
+ D L+ Y+++YW +RY I+++ +VP L+ +KDK+L GKYLNV+R+C SK +
Sbjct: 473 IRRDRLEQDYTDEYWERRYTIRDQ-DVPPQLQGLKDKVLLAGKYLNVVRECGGVDVSKQV 531
Query: 66 LDKQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRI 115
D + D + + AY A+ SL+ LL+ + L R+
Sbjct: 532 KDVP---------LTFDDPRFLDNVHNAYAHANESLMQLLLTAHSLPARL 572
>CGD|CAL0001707 [details] [associations]
symbol:orf19.708 species:5476 "Candida albicans" [GO:0005824
"outer plaque of spindle pole body" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000923 "equatorial microtubule
organizing center" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005822 "inner plaque of spindle pole body"
evidence=IEA] [GO:0000928 "gamma-tubulin small complex, spindle
pole body" evidence=IEA] [GO:0007094 "mitotic spindle assembly
checkpoint" evidence=IEA] [GO:0030473 "nuclear migration along
microtubule" evidence=IEA] [GO:0034631 "microtubule anchoring at
spindle pole body" evidence=IEA] [GO:0090307 "spindle assembly
involved in mitosis" evidence=IEA] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=IEA] [GO:0007163
"establishment or maintenance of cell polarity" evidence=IEA]
[GO:0033566 "gamma-tubulin complex localization" evidence=IEA]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA] [GO:0060630
"regulation of M/G1 transition of mitotic cell cycle" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IEA]
[GO:0005200 "structural constituent of cytoskeleton" evidence=IEA]
InterPro:IPR007259 InterPro:IPR015698 Pfam:PF04130 CGD:CAL0001707
GO:GO:0000226 GO:GO:0005815 GO:GO:0000922 eggNOG:NOG268971
KO:K16569 PANTHER:PTHR19302 EMBL:AACQ01000183 EMBL:AACQ01000182
PANTHER:PTHR19302:SF3 RefSeq:XP_711781.1 RefSeq:XP_711799.1
GeneID:3646602 GeneID:3646616 KEGG:cal:CaO19.708
KEGG:cal:CaO19.8327 Uniprot:Q59PZ2
Length = 871
Score = 115 (45.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/103 (29%), Positives = 53/103 (51%)
Query: 9 DVLDGKYSEDYWVQRYIIQNESNVPSFLEH-VKDKILRTGKYLNVIRKCKASVQSKCLLD 67
++ K SE YW + ++I+ + + F ++ KIL TGKYLN+ ++C + L
Sbjct: 344 EIFQSK-SEYYWNELFLIKIDGLLNQFQNSTIQSKILNTGKYLNIFKRCTGLHNFESL-- 400
Query: 68 KQRQRAAEMKYMESTDSALIRMIDEAYHFASSSLLTLLMQDYD 110
+++ + + + D L IDE YH A+ L+ LL Y+
Sbjct: 401 --KEKLTTITSLAAPDLEL--KIDEFYHRANKMLMKLLFDGYN 439
>FB|FBgn0035800 [details] [associations]
symbol:CG7716 species:7227 "Drosophila melanogaster"
[GO:0005200 "structural constituent of cytoskeleton" evidence=ISS]
[GO:0007020 "microtubule nucleation" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR007259 Pfam:PF04130 GO:GO:0000226 GO:GO:0005815
GO:GO:0000922 eggNOG:NOG268971 PANTHER:PTHR19302 EMBL:BT021450
PRIDE:Q5BHX4 FlyBase:FBgn0035800 InParanoid:Q5BHX4
OrthoDB:EOG4XD26G ArrayExpress:Q5BHX4 Bgee:Q5BHX4 Uniprot:Q5BHX4
Length = 728
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 19 YWVQRYIIQNESNVPSFLEHVKDKILRTGKYLNVIRKCKASVQSKCLLDKQRQRAAEMKY 78
YW +RY + + +P FL D I GKYLN++R+C S++ LL QR A Y
Sbjct: 319 YWAERYRLLPD-RLPGFLLSQADDIFLAGKYLNILRQCNVSLK---LL--QRPLA----Y 368
Query: 79 MESTDSALIRMIDEAYHFASSSLLTLLMQDYDLVNRIR 116
+ D +I +Y + L +L+++++L IR
Sbjct: 369 SQG-DLGHEEIIKTSYELPAQKFLKVLVEEHNLPLHIR 405
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 116 116 0.00091 102 3 11 22 0.45 30
29 0.45 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 551 (59 KB)
Total size of DFA: 118 KB (2078 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.41u 0.09s 14.50t Elapsed: 00:00:21
Total cpu time: 14.41u 0.09s 14.50t Elapsed: 00:00:21
Start: Thu Aug 15 15:09:17 2013 End: Thu Aug 15 15:09:38 2013