BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3235
(149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49283|MVL_DROME Protein Malvolio OS=Drosophila melanogaster GN=Mvl PE=2 SV=2
Length = 596
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 81/121 (66%), Gaps = 3/121 (2%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
MEDLTSMNDILN VMSLQLPFA +PTIAFTS IMG+FVN G K+V++ L+ V+I +N
Sbjct: 444 MEDLTSMNDILNAVMSLQLPFAAIPTIAFTSCAAIMGEFVNGLGNKIVSILLTIVVIGVN 503
Query: 61 STFFYDLLSRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIVSMGGDFKFNRSEFVSKY 120
++ ++ + E+ ++ + ++ I Y++ LYL++H+ MG N S +V ++
Sbjct: 504 --LYFVVVQVENMEIKGGLLALVCIFAILYILFNLYLVIHMAACMGNQRLMN-SRWVQRF 560
Query: 121 I 121
+
Sbjct: 561 V 561
>sp|Q21434|NRAML_CAEEL NRAMP-like transporter smf-1 OS=Caenorhabditis elegans GN=smf-1
PE=3 SV=2
Length = 562
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+++LT MND LN V +QLPFA++P I FTS+ IM DF +S ++ L SA+I++IN
Sbjct: 420 VQNLTGMNDFLNCVQMIQLPFALIPIITFTSSRKIMHDFRSSKVFQIFALITSALILSIN 479
Query: 61 STFFYD-LLSRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIVS 104
F D + SR E W II L YV+ VLYL L+ +VS
Sbjct: 480 VYFISDYVFSRLGSE--WYIIMVLAPITFAYVLFVLYLALYCLVS 522
>sp|P51027|NRAM1_CHICK Natural resistance-associated macrophage protein 1 OS=Gallus gallus
GN=SLC11A1 PE=2 SV=1
Length = 555
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+ LT MND+LN + S+ LPFAVLP + FTS +M DF N +V+ ++ ++ IN
Sbjct: 426 VSQLTGMNDLLNVLQSILLPFAVLPVLTFTSLRPLMHDFANGLLGQVLMSLITGLVCAIN 485
Query: 61 STFFYDLLSRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIVSMGGDF----KFNRSEF 116
F D L I +G LLV YV V YLL ++ G F ++NR F
Sbjct: 486 VYFVVDFLPTLRGLGYLIPLGLLLVA---YVAFVTYLLWTCSIAHGARFLARGRYNRFSF 542
>sp|Q9FN18|NRAM4_ARATH Metal transporter Nramp4 OS=Arabidopsis thaliana GN=NRAMP4 PE=2
SV=1
Length = 512
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 4 LTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTF 63
L +N+ LN + S+Q+PFAV+P + SN IMG F + ++ ++A++I IN
Sbjct: 396 LDELNEWLNVLQSVQIPFAVIPLLCLVSNEQIMGSFKIQPLVQTISWIVAALVIAINGYL 455
Query: 64 FYDLLSRNHEELSWIIIGFLLVYGIFYVIMVLYLL 98
D S L I++ ++++ I YV+ VLYL+
Sbjct: 456 MVDFFSGAATNL--ILLVPVIIFAIAYVVFVLYLI 488
>sp|P49281|NRAM2_HUMAN Natural resistance-associated macrophage protein 2 OS=Homo sapiens
GN=SLC11A2 PE=1 SV=2
Length = 568
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+E LT MND LN + SLQLPFA++P + FTS +M DF N G ++ L +I +IN
Sbjct: 432 VEHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSDFANGLGWRIAGGILVLIICSIN 491
Query: 61 STF 63
F
Sbjct: 492 MYF 494
>sp|P70553|NRAM1_RAT Natural resistance-associated macrophage protein 1 OS=Rattus
norvegicus GN=Slc11a1 PE=2 SV=3
Length = 507
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+ DL+ +ND+LN + SL LPFAVLP + FTS P +M +F N +KV+T C+ A++ IN
Sbjct: 377 LRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPAVMQEFANGWLSKVITSCIMALVCAIN 436
Query: 61 STFFYDLL-SRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIVSMGGDF 109
F L S H G + + I Y+ + YL ++ G F
Sbjct: 437 LYFVISYLPSLPHPAY----FGLVALLAIGYLGLTAYLAWTCCIAHGAKF 482
>sp|P41251|NRAM1_MOUSE Natural resistance-associated macrophage protein 1 OS=Mus musculus
GN=Slc11a1 PE=2 SV=2
Length = 548
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
++DL+ +ND+LN + SL LPFAVLP + FTS P +M +F N +K +T C+ A++ IN
Sbjct: 418 LKDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPAVMQEFANGRMSKAITSCIMALVCAIN 477
Query: 61 STFFYDLL-SRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIVSMGGDF 109
F L S H G + ++ I Y+ + YL ++ G F
Sbjct: 478 LYFVISYLPSLPHPAY----FGLVALFAIGYLGLTAYLAWTCCIAHGATF 523
>sp|P49282|NRAM2_MOUSE Natural resistance-associated macrophage protein 2 OS=Mus musculus
GN=Slc11a2 PE=1 SV=2
Length = 568
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+E LT MND LN + SLQLPFA++P + FTS +M +F N G ++ L ++ +IN
Sbjct: 432 VEHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSEFSNGIGWRIAGGILVLIVCSIN 491
Query: 61 STF 63
F
Sbjct: 492 MYF 494
>sp|O54902|NRAM2_RAT Natural resistance-associated macrophage protein 2 OS=Rattus
norvegicus GN=Slc11a2 PE=1 SV=1
Length = 568
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+E LT MND LN + SLQLPFA++P + FTS +M +F N G ++ L ++ +IN
Sbjct: 432 VEHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSEFSNGIGWRIAGGILVLLVCSIN 491
Query: 61 STF 63
F
Sbjct: 492 MYF 494
>sp|Q2QN30|NRAM6_ORYSJ Metal transporter Nramp6 OS=Oryza sativa subsp. japonica GN=NRAMP6
PE=2 SV=1
Length = 541
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 2 EDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINS 61
+ L +N+ LN + S+Q+PFA++P I S +MG F T+ VT ++ ++ITIN
Sbjct: 428 DSLDVLNEWLNVLQSIQIPFALIPLITLVSKEKVMGVFKIGRNTQAVTWTVATLLITING 487
Query: 62 TFFYDLLSRNHEELSWIIIGFLLVYGIF-YVIMVLYLLLH 100
D S E+ ++ G +L + Y VLYL+L
Sbjct: 488 YLLLDFFS---SEIRGLLSGSILCVAVLAYASFVLYLILR 524
>sp|O77741|NRAM1_PIG Natural resistance-associated macrophage protein 1 OS=Sus scrofa
GN=SLC11A1 PE=2 SV=1
Length = 538
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
++DL+S+ND+LN + SL LPFAVLP + FTS P +M +F + KV+T + ++ IN
Sbjct: 418 LQDLSSLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEFASGRVNKVITSSIMLLVCAIN 477
Query: 61 STFFYDLLSRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIVSMGG 107
FY L+S G + + + Y+ + YL+ +++ G
Sbjct: 478 ---FYFLVSYLPSLPHPAYFGLVALLAVIYLGLTTYLVWTCLIAHGA 521
>sp|Q9XT74|NRAM1_CANFA Natural resistance-associated macrophage protein 1 OS=Canis
familiaris GN=SLC11A1 PE=2 SV=2
Length = 547
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
++DL+ +ND+LN + SL LPFAVLP + FTS P +M +F N +K +T + A++ IN
Sbjct: 418 LKDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEFANGRLSKAITSFIMALVCAIN 477
Query: 61 STFFYDLLSRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIVSMG 106
F L +I++ L I Y+ + YL+ ++ G
Sbjct: 478 LYFVVIYLPSLPHPAYFILVALL---AIVYLGLTTYLVWTCFIAHG 520
>sp|Q8ZSB0|MNTH_NOSS1 Divalent metal cation transporter MntH OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=mntH PE=3 SV=1
Length = 442
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 12 NTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINS 61
++SLQLPFAV+P + FTSN +MG+FVN K + ++ VI+ +N+
Sbjct: 377 QVILSLQLPFAVIPLVMFTSNRRLMGEFVNPLWLKSLAWLVAIVIVGLNA 426
>sp|Q9SNV9|NRAM3_ARATH Metal transporter Nramp3 OS=Arabidopsis thaliana GN=NRAMP3 PE=2
SV=2
Length = 509
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 4 LTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTF 63
L +N+ LN + S+Q+PFA++P + S IMG F K + ++A++I IN
Sbjct: 400 LDVLNEWLNVLQSIQIPFALIPLLCLVSKEQIMGSFKIGPLYKTIAWLVAALVIMING-- 457
Query: 64 FYDLLSRNHEELSWII-IGFLLVYGIFYVIMVLYLLLHLIVSMGGDFKFNRSE 115
Y LL E+S I+ GF+ ++ Y +LYL+ I FK S
Sbjct: 458 -YLLLEFFSNEVSGIVYTGFVTLFTASYGAFILYLIARGITFTPWPFKAESSH 509
>sp|P49279|NRAM1_HUMAN Natural resistance-associated macrophage protein 1 OS=Homo sapiens
GN=SLC11A1 PE=1 SV=1
Length = 550
Score = 49.3 bits (116), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+ DL+ +ND+LN + SL LPFAVLP + FTS P +M +F N KVVT + ++ IN
Sbjct: 421 LRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPTLMQEFANGLLNKVVTSSIMVLVCAIN 480
Query: 61 STFFYDLL 68
F L
Sbjct: 481 LYFVVSYL 488
>sp|P49280|NRAM1_SHEEP Natural resistance-associated macrophage protein 1 OS=Ovis aries
GN=SLC11A1 PE=2 SV=2
Length = 548
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
++DL+ +ND+LN + SL LPFAVLP + FTS P +M +F N +K++T + ++ +N
Sbjct: 418 LQDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEFANGLVSKIITSSIMVLVCAVN 477
Query: 61 STF 63
F
Sbjct: 478 LYF 480
>sp|Q27981|NRAM1_BOVIN Natural resistance-associated macrophage protein 1 OS=Bos taurus
GN=SLC11A1 PE=2 SV=1
Length = 548
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+ DL+ +ND+LN + SL LPFAVLP + FTS P +M +F N +KV+T + ++ +N
Sbjct: 418 LRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEFANGLVSKVITSSIMVLVCAVN 477
Query: 61 STFFYDLL 68
F L
Sbjct: 478 LYFVISYL 485
>sp|Q27946|NRAM1_BUBBU Natural resistance-associated macrophage protein 1 OS=Bubalus
bubalis GN=SLC11A1 PE=2 SV=1
Length = 548
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+ DL+ +ND+LN + SL LPFAVLP + FTS P +M +F N +KV+T + ++ +N
Sbjct: 418 LRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEFANGLVSKVITSSIMVLVCAVN 477
Query: 61 STF 63
F
Sbjct: 478 LYF 480
>sp|Q95102|NRAM1_BISBI Natural resistance-associated macrophage protein 1 OS=Bison bison
GN=SLC11A1 PE=2 SV=1
Length = 548
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+ DL+ +ND+LN + SL LPFAVLP + FTS P +M +F N +KV+T + ++ +N
Sbjct: 418 LRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMREFANGLVSKVITSSIMVLVCAVN 477
Query: 61 STF 63
F
Sbjct: 478 LYF 480
>sp|Q9SN36|NRAM5_ARATH Metal transporter Nramp5 OS=Arabidopsis thaliana GN=NRAMP5 PE=2
SV=1
Length = 530
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 4 LTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTF 63
L +N+ LN + S+Q+PFAV+P + SN +IMG F + + ++ ++ IN
Sbjct: 414 LDVLNEWLNILQSMQIPFAVIPLLTMVSNEHIMGVFKIGPSLEKLAWTVAVFVMMING-- 471
Query: 64 FYDLLSRNHEELSWIIIGFLLVYGIF-YVIMVLYLL 98
Y LL E+ ++GFL+ G+ Y+ ++YL+
Sbjct: 472 -YLLLDFFMAEVEGFLVGFLVFGGVVGYISFIIYLV 506
>sp|Q10Q65|NRAM2_ORYSJ Metal transporter Nramp2 OS=Oryza sativa subsp. japonica GN=NRAMP2
PE=2 SV=1
Length = 524
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 7 MNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFYD 66
+N+ LN + S+Q+PFA++P I S +MG FV TKV++ ++ ++ IN Y
Sbjct: 417 LNEALNVLQSIQIPFALIPLITLVSKEQVMGSFVVGPITKVISWIVTVFLMLING---YL 473
Query: 67 LLSRNHEELSWIII-GFLLVYGIFYVIMVLYLLL 99
+LS E+ ++ L V Y+ ++YL++
Sbjct: 474 ILSFYATEVRGALVRSSLCVVLAVYLAFIVYLIM 507
>sp|P56436|NRAM1_CEREL Natural resistance-associated macrophage protein 1 OS=Cervus
elaphus GN=SLC11A1 PE=2 SV=1
Length = 548
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+ DL+ +ND+LN + SL LPFAVLP + FTS P +M +F N +KV++ + ++ +N
Sbjct: 418 LRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPAVMQEFANGLVSKVISSSIMVLVCAVN 477
Query: 61 STF 63
F
Sbjct: 478 LYF 480
>sp|Q9C6B2|NRAM2_ARATH Metal transporter Nramp2 OS=Arabidopsis thaliana GN=NRAMP2 PE=2
SV=1
Length = 530
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 4 LTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTF 63
L +N+ LN + S+Q+PFA+LP + S IMGDF + + ++A+++ IN
Sbjct: 412 LDVLNEWLNVLQSVQIPFALLPLLTLVSKEEIMGDFKIGPILQRIAWTVAALVMIINGYL 471
Query: 64 FYDLLSRNHEELSWIIIGFLL-----VYGIFYVIMVLYLLLH 100
D + GFL V+ Y+ ++YL+ H
Sbjct: 472 LLDFFVSE-------VDGFLFGVTVCVWTTAYIAFIVYLISH 506
>sp|Q653V6|NRAM3_ORYSJ Metal transporter Nramp3 OS=Oryza sativa subsp. japonica GN=NRAMP3
PE=2 SV=1
Length = 550
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 12/109 (11%)
Query: 10 ILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTF----FY 65
I + ++S +LPFA++P + FTS+ MG NS V+T + + I+ IN+ F F
Sbjct: 400 IASMILSFELPFALVPLLKFTSSRTKMGQHTNSKAISVITWGIGSFIVVINTYFLITSFV 459
Query: 66 DLLSRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIVSMGGDFKFNRS 114
LL H LS + F ++G +++ + +L+L+ F+ NR
Sbjct: 460 KLLL--HNGLSTVSQVFSGIFGFLGMLIYMAAILYLV------FRKNRK 500
>sp|Q9RPF3|MNTH1_PSEAE Divalent metal cation transporter MntH 1 OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=mntH1 PE=3 SV=2
Length = 439
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 12 NTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFY 65
V+SLQLPFA+ P I F+S+ +MG+FVN + L +I N T Y
Sbjct: 382 QVVLSLQLPFALWPLIRFSSDRGLMGEFVNPRWVSALAWSLFGLISAANLTLLY 435
>sp|Q8Y773|MNTH_LISMO Divalent metal cation transporter MntH OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=mntH PE=3
SV=1
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 7 MNDIL---NTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN-ST 62
+N++L ++S+QL FAV+P + FTS+ MG+FVN T K+++ ++ I +N
Sbjct: 381 INELLIFSQVILSMQLSFAVIPLVMFTSDKQKMGEFVNPTWLKIISWAVAIFIAVLNIYL 440
Query: 63 FFYDLLS 69
FY L S
Sbjct: 441 LFYTLTS 447
>sp|B8DE85|MNTH_LISMH Divalent metal cation transporter MntH OS=Listeria monocytogenes
serotype 4a (strain HCC23) GN=mntH PE=3 SV=1
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 7 MNDIL---NTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN-ST 62
+N++L ++S+QL FAV+P + FTS+ MG+FVN T K+++ ++ I +N
Sbjct: 381 INELLIFSQVILSMQLSFAVIPLVMFTSDKQKMGEFVNPTWLKIISWAVAIFIAVLNIYL 440
Query: 63 FFYDLLS 69
FY L S
Sbjct: 441 LFYTLTS 447
>sp|Q71ZP6|MNTH_LISMF Divalent metal cation transporter MntH OS=Listeria monocytogenes
serotype 4b (strain F2365) GN=mntH PE=3 SV=1
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 7 MNDIL---NTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN-ST 62
+N++L ++S+QL FAV+P + FTS+ MG+FVN T K+++ ++ I +N
Sbjct: 381 INELLIFSQVILSMQLSFAVIPLVMFTSDKQKMGEFVNPTWLKIISWAVAIFIAVLNIYL 440
Query: 63 FFYDLLS 69
FY L S
Sbjct: 441 LFYTLTS 447
>sp|C1L2Y0|MNTH_LISMC Divalent metal cation transporter MntH OS=Listeria monocytogenes
serotype 4b (strain CLIP80459) GN=mntH PE=3 SV=1
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 7 MNDIL---NTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN-ST 62
+N++L ++S+QL FAV+P + FTS+ MG+FVN T K+++ ++ I +N
Sbjct: 381 INELLIFSQVILSMQLSFAVIPLVMFTSDKQKMGEFVNPTWLKIISWAVAIFIAVLNIYL 440
Query: 63 FFYDLLS 69
FY L S
Sbjct: 441 LFYTLTS 447
>sp|Q92BT1|MNTH_LISIN Divalent metal cation transporter MntH OS=Listeria innocua serovar
6a (strain CLIP 11262) GN=mntH PE=3 SV=1
Length = 448
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 7 MNDIL---NTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN-ST 62
+N++L ++S+QL FAV+P + FTS+ MG+FVNS K+V+ ++ I +N
Sbjct: 381 INELLIFSQVILSMQLSFAVIPLVMFTSDKQKMGEFVNSPWLKIVSWSVAIFIAFLNIYL 440
Query: 63 FFYDLLS 69
FY L S
Sbjct: 441 LFYTLTS 447
>sp|Q8XSF6|MNTH_RALSO Divalent metal cation transporter MntH OS=Ralstonia solanacearum
(strain GMI1000) GN=mntH PE=3 SV=1
Length = 442
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 10 ILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFYDLLS 69
I V+ QLPFA+ P I T + +MG F N T V CL AVI N + +L+
Sbjct: 382 ISQVVLGFQLPFAMFPLIRMTGDRALMGTFANGRLTSAVAWCLFAVISVANLWLVWQVLA 441
>sp|Q8PKX1|MNTH_XANAC Divalent metal cation transporter MntH OS=Xanthomonas axonopodis
pv. citri (strain 306) GN=mntH PE=3 SV=1
Length = 444
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 12 NTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFYD 66
V+S+QLPFAV+P + F S+ +MG V + ++AVI+ +N +D
Sbjct: 386 QVVLSMQLPFAVIPLVRFVSDRQLMGALVAPAWLVRIAWVIAAVIVCLNLKLLWD 440
>sp|Q03D26|MNTH_LACC3 Divalent metal cation transporter MntH OS=Lactobacillus casei
(strain ATCC 334) GN=mntH PE=3 SV=1
Length = 458
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 15 MSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+S+ LPFAV+P + +TS+ IMG+F N K +S V+I +N
Sbjct: 401 LSIALPFAVIPLVLYTSDKKIMGEFANRAWVKWTAWFISGVLIILN 446
>sp|B3W6P3|MNTH_LACCB Divalent metal cation transporter MntH OS=Lactobacillus casei
(strain BL23) GN=mntH PE=3 SV=1
Length = 458
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 15 MSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+S+ LPFAV+P + +TS+ IMG+F N K +S V+I +N
Sbjct: 401 LSIALPFAVIPLVLYTSDKKIMGEFANRAWVKWTAWFISGVLIILN 446
>sp|Q93V04|MNTH_LACBR Divalent metal cation transporter MntH OS=Lactobacillus brevis
GN=mntH PE=2 SV=1
Length = 464
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+E+L +++ + +S+ LPFA++P + FTS+ +MG+FVN K + V++++N
Sbjct: 396 IENLLTLSQVF---LSVALPFAIVPLVKFTSSKELMGEFVNKAWVKYSAWVATVVLVSLN 452
>sp|P65545|MNTH_BRUSU Divalent metal cation transporter MntH OS=Brucella suis biovar 1
(strain 1330) GN=mntH PE=3 SV=1
Length = 456
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 14 VMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFYDLLS 69
V+SLQLPFAV+P + FT+ MG + + +A+I+ +N YD +
Sbjct: 397 VLSLQLPFAVIPLVIFTAQKKKMGSLAAAPWVTFLAAITAAIIVVLNLKLIYDFFT 452
>sp|P65544|MNTH_BRUME Divalent metal cation transporter MntH OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=mntH
PE=3 SV=1
Length = 456
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 14 VMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFYDLLS 69
V+SLQLPFAV+P + FT+ MG + + +A+I+ +N YD +
Sbjct: 397 VLSLQLPFAVIPLVIFTAQKKKMGSLAAAPWVTFLAAITAAIIVVLNLKLIYDFFT 452
>sp|A0AIM7|MNTH_LISW6 Divalent metal cation transporter MntH OS=Listeria welshimeri
serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
GN=mntH PE=3 SV=1
Length = 448
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 7 MNDIL---NTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
+N++L ++S+QL FAV+P + FTS+ MG+FVN + K+++ ++ I +N
Sbjct: 381 INELLIFSQVILSMQLSFAVIPLVMFTSDKEKMGEFVNPSWLKIISWAVAIFIAILN 437
>sp|Q03TH5|MNTH_LACBA Divalent metal cation transporter MntH OS=Lactobacillus brevis
(strain ATCC 367 / JCM 1170) GN=mntH PE=3 SV=1
Length = 459
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVV 48
+EDL + + + +S+ LPFA++P + FTS+ +MG+F N T +K++
Sbjct: 391 IEDLLTFSQVF---LSIALPFAMIPLVIFTSSKKLMGEFANRTWSKIL 435
>sp|Q9SAH8|NRAM1_ARATH Metal transporter Nramp1 OS=Arabidopsis thaliana GN=NRAMP1 PE=1
SV=1
Length = 532
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 10 ILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTF----FY 65
I + ++S +LPFA++P + FTS MG VN +T + +I+ IN + F
Sbjct: 396 IASMILSFELPFALVPLLKFTSCKTKMGSHVNPMAITALTWVIGGLIMGINIYYLVSSFI 455
Query: 66 DLLSRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIVSMGGDFKFNR 113
LL +H +L I++ F + G + + L + +L+ F+ NR
Sbjct: 456 KLLIHSHMKL--ILVVFCGILGFAGIALYLAAIAYLV------FRKNR 495
>sp|Q9S9N8|NRAM6_ARATH Metal transporter Nramp6 OS=Arabidopsis thaliana GN=NRAMP6 PE=2
SV=2
Length = 527
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 10 ILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTF----FY 65
I + ++S +LPFA++P + FTS+ MG NS VT + +I+ IN + F
Sbjct: 388 IASMILSFELPFALVPLLKFTSSKTKMGSHANSLVISSVTWIIGGLIMGINIYYLVSSFI 447
Query: 66 DLLSRNHEELSWII-IGFLLVYGIF-YVIMVLYLLLH 100
LL +H L I+ +G L GI Y+ + YL+L
Sbjct: 448 KLLLHSHMNLVAIVFLGVLGFSGIATYLAAISYLVLR 484
>sp|Q8GH68|MNTH_LACPL Divalent metal cation transporter MntH OS=Lactobacillus plantarum
(strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=mntH PE=3
SV=1
Length = 464
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 1 MEDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTK 46
+EDL +M+ + +S+ LPFA++P + FTSN +MG+F N K
Sbjct: 396 IEDLLTMSQVF---LSIALPFAMIPLVMFTSNRALMGNFTNRVWVK 438
>sp|Q89K67|MNTH_BRAJA Divalent metal cation transporter MntH OS=Bradyrhizobium japonicum
(strain USDA 110) GN=mntH PE=3 SV=1
Length = 450
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 14 VMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFYDLL 68
V+S+QLPFAV+P + F S+ MG F S + ++ VI+ +N D L
Sbjct: 394 VLSMQLPFAVIPLVRFVSDRRKMGKFAISPYVAAIAWIVAGVIVVLNLKLLADTL 448
>sp|Q9RPF2|MNTH2_PSEAE Divalent metal cation transporter MntH 2 OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=mntH2 PE=3 SV=2
Length = 438
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 EDLTSMNDILNTV-MSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
ED T+ I + V +S+QLP AV+P + F S+ +MG GT+ + ++ I+ +N
Sbjct: 369 EDGTARLLIFSQVILSMQLPLAVIPLLQFVSDRRLMGPLAIGAGTRWLAWAVALAIVGLN 428
Query: 61 STFFYD 66
D
Sbjct: 429 LQLLAD 434
>sp|Q869V1|NRAM1_DICDI Metal transporter nramp1 homolog OS=Dictyostelium discoideum
GN=nramp1 PE=2 SV=1
Length = 533
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 4 LTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMG 37
L S++ LN + S+QLPFAV+P + FTS+ IMG
Sbjct: 410 LDSLDQWLNILQSIQLPFAVVPVLLFTSSEKIMG 443
>sp|P96593|MNTH_BACSU Divalent metal cation transporter MntH OS=Bacillus subtilis (strain
168) GN=mntH PE=1 SV=1
Length = 425
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 12 NTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN 60
V+S + FA++P I FTSN IMG +N+ VV+ ++ +I+ +N
Sbjct: 368 QVVLSFGIAFALIPLIMFTSNKRIMGSLINAKWITVVSWLIAVLIVALN 416
>sp|Q98I99|MNTH_RHILO Divalent metal cation transporter MntH OS=Rhizobium loti (strain
MAFF303099) GN=mntH PE=3 SV=1
Length = 454
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 14 VMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFYDLL 68
++S+QLPFAV+P + F S+ MG+ G + ++A+I+ +N YD L
Sbjct: 396 ILSMQLPFAVVPLVQFVSDKKKMGNLAIPRGVAALAWVVAAIILVLNFKLLYDTL 450
>sp|Q8H4H5|NRAM5_ORYSJ Metal transporter Nramp5 OS=Oryza sativa subsp. japonica GN=NRAMP5
PE=2 SV=1
Length = 538
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 10 ILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITIN-----STFF 64
I + ++S +LPFA++P + F+S+ + MG NS V + L +II IN ++F
Sbjct: 394 IASMILSFELPFALIPLLKFSSSKSKMGPHKNSIYIIVFSWFLGLLIIGINMYFLSTSFV 453
Query: 65 YDLLSRNHEELSWIIIG-FLLVYGIFYVIMVLYLLL 99
L+ + + + +++G + + + Y++ V+YL +
Sbjct: 454 GWLIHNDLPKYANVLVGAAVFPFMLVYIVAVVYLTI 489
>sp|Q0D7E4|NRAM1_ORYSJ Metal transporter Nramp1 OS=Oryza sativa subsp. japonica GN=NRAMP1
PE=2 SV=1
Length = 518
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 10 ILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFYDLLS 69
I + ++S +LPFA++P + F+S+ N MG+ NS + L VII IN F L
Sbjct: 385 IASMILSFELPFALIPLLKFSSSSNKMGENKNSIYIVGFSWVLGFVIIGINIYFLSTKL- 443
Query: 70 RNHEELSWIIIGFLLVYGIFYVIMVLY--LLLHLIVSMGGDFKFNRSEFVSK 119
+ WI+ L + + +VL+ +LL+++ + F+ + +FVS+
Sbjct: 444 -----VGWILHNALPTFANVLIGIVLFPLMLLYVVAVIYLTFRKDTVKFVSR 490
>sp|Q5QN13|NRAM4_ORYSJ Metal transporter Nramp4 OS=Oryza sativa subsp. japonica GN=NRAMP4
PE=2 SV=1
Length = 550
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 9 DILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFF 64
+I V+S LPFA++P I F+S+ +G + N+T + LS VII IN FF
Sbjct: 418 NIAAIVLSFVLPFALIPLIKFSSSCTNIGPYKNATSIIRIAWILSLVIIGINIYFF 473
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.140 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,770,846
Number of Sequences: 539616
Number of extensions: 1798915
Number of successful extensions: 6304
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6144
Number of HSP's gapped (non-prelim): 171
length of query: 149
length of database: 191,569,459
effective HSP length: 107
effective length of query: 42
effective length of database: 133,830,547
effective search space: 5620882974
effective search space used: 5620882974
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)