Query psy3235
Match_columns 149
No_of_seqs 179 out of 1033
Neff 4.9
Searched_HMMs 46136
Date Fri Aug 16 19:48:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3235.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3235hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1291|consensus 99.8 2.3E-20 5.1E-25 166.8 0.3 108 2-110 380-487 (503)
2 PRK00701 manganese transport p 99.3 2.6E-12 5.6E-17 114.0 8.4 67 2-68 370-436 (439)
3 COG1914 MntH Mn2+ and Fe2+ tra 99.3 1E-11 2.2E-16 110.2 8.5 67 3-69 347-413 (416)
4 PF06011 TRP: Transient recept 69.8 78 0.0017 28.0 10.9 67 36-103 195-261 (438)
5 PF10762 DUF2583: Protein of u 68.8 20 0.00043 26.1 5.6 69 46-120 11-79 (89)
6 PRK10692 hypothetical protein; 67.1 28 0.0006 25.5 6.1 70 46-121 11-80 (92)
7 PF05915 DUF872: Eukaryotic pr 43.9 1.4E+02 0.0029 22.4 7.7 56 45-101 41-103 (115)
8 PF15050 SCIMP: SCIMP protein 42.9 63 0.0014 25.1 4.9 33 76-108 8-40 (133)
9 PF13150 DUF3989: Protein of u 40.4 80 0.0017 22.5 4.8 48 81-129 29-78 (85)
10 PF11085 YqhR: Conserved membr 36.7 1.4E+02 0.003 24.2 6.2 32 36-68 60-91 (173)
11 PF12273 RCR: Chitin synthesis 33.7 59 0.0013 24.1 3.4 12 106-117 30-41 (130)
12 PF06570 DUF1129: Protein of u 30.6 2.8E+02 0.006 22.1 10.3 11 17-27 121-131 (206)
13 PRK01642 cls cardiolipin synth 28.9 2.2E+02 0.0047 25.8 6.8 50 49-99 6-55 (483)
14 PF05313 Pox_P21: Poxvirus P21 27.8 3.5E+02 0.0075 22.3 7.4 48 12-60 86-134 (189)
15 PF12575 DUF3753: Protein of u 22.7 2.8E+02 0.0061 19.4 6.0 13 5-17 18-30 (72)
16 PRK13453 F0F1 ATP synthase sub 21.9 1.9E+02 0.004 22.5 4.5 30 76-105 17-46 (173)
17 COG4665 FcbT2 TRAP-type mannit 21.5 3.4E+02 0.0075 22.2 6.0 16 82-97 97-112 (182)
No 1
>KOG1291|consensus
Probab=99.78 E-value=2.3e-20 Score=166.77 Aligned_cols=108 Identities=31% Similarity=0.454 Sum_probs=98.4
Q ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHH
Q psy3235 2 EDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFYDLLSRNHEELSWIIIG 81 (149)
Q Consensus 2 ~~L~~L~~~~QVllSlqLPfaLIPLL~fts~k~iMG~f~ns~~~~ilawli~~vvi~lNi~llv~~l~~~~l~~~~~~~~ 81 (149)
++++++|+++||+||+||||+++|+++|||+|++||+|+|+...+..+|.+..++..+|.|+++++.. +..+.++.++.
T Consensus 380 ~~l~~l~~~~nvl~S~~LPFa~iPLl~ftS~r~IM~~~~~~~~~~~~~~~~~~~~~~in~y~~v~~~~-~~~~~~~~~~~ 458 (503)
T KOG1291|consen 380 DGLSGLNDFLNVLQSLQLPFAVIPLLTFTSSRKIMGVFKNGLVTEELTWTVAALVLGINGYFLVSFFW-SLVGKHSKIVV 458 (503)
T ss_pred ccHHHHHHHHHHHHHHhhhHHHhhHHhhhccHHHhhhhccCccceeeeehheeeeeeeeeEEeeeehh-hhcCCceeeeh
Confidence 68999999999999999999999999999999999999999999999999999999999999998875 44444666778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Q psy3235 82 FLLVYGIFYVIMVLYLLLHLIVSMGGDFK 110 (149)
Q Consensus 82 ~v~~~~~~Yl~fl~YL~~~p~~~~~~~~l 110 (149)
.+....++|+++++||+.+|+...+....
T Consensus 459 ~~~~~~~~y~~~i~yL~~~~l~~~~~~~~ 487 (503)
T KOG1291|consen 459 TVNVWTLAYLAFILYLAATCLNAYSIISL 487 (503)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 88888999999999999999998876544
No 2
>PRK00701 manganese transport protein MntH; Reviewed
Probab=99.35 E-value=2.6e-12 Score=113.98 Aligned_cols=67 Identities=30% Similarity=0.581 Sum_probs=64.1
Q ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3235 2 EDLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFYDLL 68 (149)
Q Consensus 2 ~~L~~L~~~~QVllSlqLPfaLIPLL~fts~k~iMG~f~ns~~~~ilawli~~vvi~lNi~llv~~l 68 (149)
.+..++++++|++|+++||++++|+++++|||++||+|+|+++.++++|++.++++.+|++++++.+
T Consensus 370 ~~p~~lli~aqv~~~i~LP~~~~~ll~l~~~~~imG~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~ 436 (439)
T PRK00701 370 LDPTRLLVLSQVVLSFGLPFALIPLLLFTSDRKLMGELVNPRWVKIIAWIIAVLIVALNIYLLYQTF 436 (439)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999999999999999999999999999998876
No 3
>COG1914 MntH Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]
Probab=99.28 E-value=1e-11 Score=110.16 Aligned_cols=67 Identities=25% Similarity=0.455 Sum_probs=64.2
Q ss_pred chHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3235 3 DLTSMNDILNTVMSLQLPFAVLPTIAFTSNPNIMGDFVNSTGTKVVTLCLSAVIITINSTFFYDLLS 69 (149)
Q Consensus 3 ~L~~L~~~~QVllSlqLPfaLIPLL~fts~k~iMG~f~ns~~~~ilawli~~vvi~lNi~llv~~l~ 69 (149)
+..++..++|+++|+++||+++|++.++++|++||+|+|++|.++++|..++.+..+|++++++++.
T Consensus 347 ~~~~lL~~sqvl~~~~lP~~~~~ll~~~~~k~~mg~~~~~~~~~~~~~~v~~~i~~L~i~li~~~~~ 413 (416)
T COG1914 347 DPARLLVFSQVLLSVILPFALIPLLLLTSDKKLMGDYKNPRWLTVLGWIVVILIVALNIILLVGTLG 413 (416)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5678999999999999999999999999999999999999999999999999999999999998773
No 4
>PF06011 TRP: Transient receptor potential (TRP) ion channel; InterPro: IPR010308 This family consists of hypothetical proteins of unknown function found in fungi.
Probab=69.82 E-value=78 Score=28.05 Aligned_cols=67 Identities=10% Similarity=0.247 Sum_probs=37.6
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3235 36 MGDFVNSTGTKVVTLCLSAVIITINSTFFYDLLSRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIV 103 (149)
Q Consensus 36 MG~f~ns~~~~ilawli~~vvi~lNi~llv~~l~~~~l~~~~~~~~~v~~~~~~Yl~fl~YL~~~p~~ 103 (149)
..+++..++....+.+.-.+.++.--..+....+-..-+ .+...+..++..+++.+.+.|..++-+.
T Consensus 195 ~~~~r~~~~~~~~g~~lr~~li~~~pi~~ls~~qf~~~~-s~~~~~lA~i~~~~~~~~~~~~~~~i~~ 261 (438)
T PF06011_consen 195 LAEFRRHWWSFLKGNLLRLLLIFFFPITILSFFQFTLAD-SWASVVLAVILFALWIVLLGYFVFRIIR 261 (438)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHHHHHHHHHHhheE
Confidence 456777777777776666555544444443333201112 2444555555666777777787776444
No 5
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=68.84 E-value=20 Score=26.10 Aligned_cols=69 Identities=13% Similarity=0.001 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccCchhhhhh
Q psy3235 46 KVVTLCLSAVIITINSTFFYDLLSRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIVSMGGDFKFNRSEFVSKY 120 (149)
Q Consensus 46 ~ilawli~~vvi~lNi~llv~~l~~~~l~~~~~~~~~v~~~~~~Yl~fl~YL~~~p~~~~~~~~l~~~~~~~~~~ 120 (149)
|++..+--+++++--.|.+.+.+ ++++.+- ++.=+.+...+++.++||+-..+ -|.+..=++.||++||
T Consensus 11 N~lMglGmv~Mv~gigysi~~~~--~~L~Lp~--~~~~gal~~IFiGAllWL~GARi--gGrE~VaDRYwWvkh~ 79 (89)
T PF10762_consen 11 NVLMGLGMVVMVGGIGYSILSQI--PQLGLPQ--FLAHGALFSIFIGALLWLVGARI--GGREKVADRYWWVKHF 79 (89)
T ss_pred hHHHHHhHHHHHHhHHHHHHHhc--ccCCCcH--HHHhhHHHHHHHHHHHHHhcccc--cCcchhhhhHHHHHhh
Confidence 44444444444444456666666 3443332 22222334466777788865432 2334444778889888
No 6
>PRK10692 hypothetical protein; Provisional
Probab=67.11 E-value=28 Score=25.52 Aligned_cols=70 Identities=16% Similarity=0.007 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccCchhhhhhc
Q psy3235 46 KVVTLCLSAVIITINSTFFYDLLSRNHEELSWIIIGFLLVYGIFYVIMVLYLLLHLIVSMGGDFKFNRSEFVSKYI 121 (149)
Q Consensus 46 ~ilawli~~vvi~lNi~llv~~l~~~~l~~~~~~~~~v~~~~~~Yl~fl~YL~~~p~~~~~~~~l~~~~~~~~~~~ 121 (149)
|++..+--+++++--.|-+.+.+ .+++.+- ++.=+.+...+++.++||+-..+ -|.+..=++.||++||=
T Consensus 11 N~lMglGmv~Mv~gigysi~~~i--~~L~Lp~--~~~~gal~~IFiGAllWL~GAri--gGRE~VaDRYwwvkh~d 80 (92)
T PRK10692 11 NVLMGLGLVVMVVGVGYSILNQL--PQLNLPQ--FFAHGALLSIFVGALLWLAGARV--GGREQVADRYWWVRHYD 80 (92)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhc--ccCCchH--HHHhhHHHHHHHHHHHHHhcccc--cCcchhhhhHHHHhhcc
Confidence 44444444444444455566666 3444332 22222334456777788765432 23444447788888883
No 7
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=43.91 E-value=1.4e+02 Score=22.40 Aligned_cols=56 Identities=18% Similarity=0.185 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--h--cCCchhHHHHHHHHHH---HHHHHHHHHHHHHHH
Q psy3235 45 TKVVTLCLSAVIITINSTFFYDLLS--R--NHEELSWIIIGFLLVY---GIFYVIMVLYLLLHL 101 (149)
Q Consensus 45 ~~ilawli~~vvi~lNi~llv~~l~--~--~~l~~~~~~~~~v~~~---~~~Yl~fl~YL~~~p 101 (149)
.|.++..+++++++.-...+-..+. + ++.+..| ..++++.+ ..+|-..++|.+++-
T Consensus 41 wK~I~la~~Lli~G~~li~~g~l~~~~~i~~~~~~~~-~llilG~L~fIPG~Y~~~i~y~a~rg 103 (115)
T PF05915_consen 41 WKSIALAVFLLIFGTVLIIIGLLLFFGHIDGDRDRGW-ALLILGILCFIPGFYHTRIAYYAWRG 103 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccc-hHHHHHHHHHhccHHHHHHHHHHHcC
Confidence 5666666666555554333322222 1 2233344 33333333 448999999988763
No 8
>PF15050 SCIMP: SCIMP protein
Probab=42.93 E-value=63 Score=25.06 Aligned_cols=33 Identities=18% Similarity=0.403 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q psy3235 76 SWIIIGFLLVYGIFYVIMVLYLLLHLIVSMGGD 108 (149)
Q Consensus 76 ~~~~~~~v~~~~~~Yl~fl~YL~~~p~~~~~~~ 108 (149)
.|.+.+..+++.-.-+++++|.+.|.....|.+
T Consensus 8 FWiiLAVaII~vS~~lglIlyCvcR~~lRqGkk 40 (133)
T PF15050_consen 8 FWIILAVAIILVSVVLGLILYCVCRWQLRQGKK 40 (133)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 454444455556678899999999999998843
No 9
>PF13150 DUF3989: Protein of unknown function (DUF3989)
Probab=40.45 E-value=80 Score=22.51 Aligned_cols=48 Identities=21% Similarity=0.350 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCc--cccCchhhhhhccCccccce
Q psy3235 81 GFLLVYGIFYVIMVLYLLLHLIVSMGGDF--KFNRSEFVSKYIGSQLRDNI 129 (149)
Q Consensus 81 ~~v~~~~~~Yl~fl~YL~~~p~~~~~~~~--l~~~~~~~~~~~~~~~~~~~ 129 (149)
.++.+..++|.++.+|.+++.+-..|.+. - -+-++++.--.++..|||
T Consensus 29 ~vvl~ml~~fa~l~ly~~~~ai~~~Gk~~g~~-~~IeHI~~l~l~~~~DSi 78 (85)
T PF13150_consen 29 RVVLVMLVLFAALCLYMTVSAIYDIGKEDGER-MEIEHIRPLELPQPKDSI 78 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcccC-ccceeccccCCCCCCCcc
Confidence 44555577899999999999999988322 1 123344433334455555
No 10
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=36.66 E-value=1.4e+02 Score=24.25 Aligned_cols=32 Identities=19% Similarity=0.407 Sum_probs=22.2
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3235 36 MGDFVNSTGTKVVTLCLSAVIITINSTFFYDLL 68 (149)
Q Consensus 36 MG~f~ns~~~~ilawli~~vvi~lNi~llv~~l 68 (149)
-|+++++++.++++++...++..+ ..+++..+
T Consensus 60 ~g~wk~t~~G~~igi~~~gv~Si~-aAllY~~~ 91 (173)
T PF11085_consen 60 LGDWKNTWLGNLIGIVFIGVFSIV-AALLYYAL 91 (173)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 489999999999999776655544 34444433
No 11
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=33.66 E-value=59 Score=24.12 Aligned_cols=12 Identities=8% Similarity=-0.006 Sum_probs=6.2
Q ss_pred CCCccccCchhh
Q psy3235 106 GGDFKFNRSEFV 117 (149)
Q Consensus 106 ~~~~l~~~~~~~ 117 (149)
|..-+....|..
T Consensus 30 G~~P~~gt~w~~ 41 (130)
T PF12273_consen 30 GLQPIYGTRWMA 41 (130)
T ss_pred CCCCcCCceecC
Confidence 655554445544
No 12
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=30.59 E-value=2.8e+02 Score=22.06 Aligned_cols=11 Identities=0% Similarity=-0.176 Sum_probs=4.0
Q ss_pred HhhHHHHHHHH
Q psy3235 17 LQLPFAVLPTI 27 (149)
Q Consensus 17 lqLPfaLIPLL 27 (149)
+...++..-+.
T Consensus 121 i~~G~~~~~~~ 131 (206)
T PF06570_consen 121 IVGGLVFYFIF 131 (206)
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 13
>PRK01642 cls cardiolipin synthetase; Reviewed
Probab=28.89 E-value=2.2e+02 Score=25.80 Aligned_cols=50 Identities=18% Similarity=0.179 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy3235 49 TLCLSAVIITINSTFFYDLLSRNHEELSWIIIGFLLVYGIFYVIMVLYLLL 99 (149)
Q Consensus 49 awli~~vvi~lNi~llv~~l~~~~l~~~~~~~~~v~~~~~~Yl~fl~YL~~ 99 (149)
+|+........++..+...+....-|.....|+ ++++.+-|+++++|+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~~~r~~~~~~aWl-~~i~~~P~~G~~lY~~f 55 (483)
T PRK01642 6 SWLGILLYWLLIAGVTLRILMKRRTVQGAIAWL-LILYILPYVGIIAYLLF 55 (483)
T ss_pred hHHHHHHHHHHHHHHHHhhHhcCCCHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence 444444444444444433343112232222343 33446678999999976
No 14
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=27.82 E-value=3.5e+02 Score=22.31 Aligned_cols=48 Identities=29% Similarity=0.402 Sum_probs=23.7
Q ss_pred HHHHHHhhHHHHHHHHHHhcCCCccccc-cchhHHHHHHHHHHHHHHHHH
Q psy3235 12 NTVMSLQLPFAVLPTIAFTSNPNIMGDF-VNSTGTKVVTLCLSAVIITIN 60 (149)
Q Consensus 12 QVllSlqLPfaLIPLL~fts~k~iMG~f-~ns~~~~ilawli~~vvi~lN 60 (149)
=++-|+.|||.-.-+ ..|-.-++|..- .+...+.++..+.+++.+.+|
T Consensus 86 i~iAs~llP~PsLVI-aYCl~mqi~~~~~~~~~gMsIvcv~~Si~ti~~~ 134 (189)
T PF05313_consen 86 IIIASLLLPFPSLVI-AYCLSMQIYNPGANNNVGMSIVCVIMSIITIIVN 134 (189)
T ss_pred HHHHHHHcCccHHHH-HHHHHheeecCCCcceehhHHHHHHHHHHHHHHH
Confidence 345688888844333 444444555443 333444444444444444443
No 15
>PF12575 DUF3753: Protein of unknown function (DUF3753); InterPro: IPR009175 This group represents an uncharacterised conserved protein belonging to poxvirus family I2.
Probab=22.65 E-value=2.8e+02 Score=19.45 Aligned_cols=13 Identities=31% Similarity=0.557 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHH
Q psy3235 5 TSMNDILNTVMSL 17 (149)
Q Consensus 5 ~~L~~~~QVllSl 17 (149)
++.+++.+++.|+
T Consensus 18 dDf~~Fi~vVksV 30 (72)
T PF12575_consen 18 DDFNNFINVVKSV 30 (72)
T ss_pred HHHHHHHHHHHHH
Confidence 4667777777764
No 16
>PRK13453 F0F1 ATP synthase subunit B; Provisional
Probab=21.88 E-value=1.9e+02 Score=22.50 Aligned_cols=30 Identities=7% Similarity=0.094 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy3235 76 SWIIIGFLLVYGIFYVIMVLYLLLHLIVSM 105 (149)
Q Consensus 76 ~~~~~~~v~~~~~~Yl~fl~YL~~~p~~~~ 105 (149)
.|+..+..++-.++.+.++-|++++|+..+
T Consensus 17 ~~~t~~~~iInFliL~~lL~~~l~~pi~~~ 46 (173)
T PRK13453 17 EWGTVIVTVLTFIVLLALLKKFAWGPLKDV 46 (173)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 454333344434444555567788998875
No 17
>COG4665 FcbT2 TRAP-type mannitol/chloroaromatic compound transport system, small permease component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.55 E-value=3.4e+02 Score=22.19 Aligned_cols=16 Identities=19% Similarity=0.517 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHHH
Q psy3235 82 FLLVYGIFYVIMVLYL 97 (149)
Q Consensus 82 ~v~~~~~~Yl~fl~YL 97 (149)
+.+.+..-+...++|+
T Consensus 97 GtifFLlPfc~l~iy~ 112 (182)
T COG4665 97 GTIFFLLPFCLLVIYL 112 (182)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333334444444444
Done!