Query psy324
Match_columns 101
No_of_seqs 113 out of 1107
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 19:55:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy324.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/324hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lkx_A Myosin IE heavy chain; 100.0 6.6E-38 2.3E-42 252.6 8.0 96 4-100 373-468 (697)
2 2v26_A Myosin VI; calmodulin-b 100.0 1.7E-37 5.8E-42 252.7 8.6 92 8-100 443-534 (784)
3 1w7j_A Myosin VA; motor protei 100.0 3.5E-37 1.2E-41 251.1 8.1 95 4-100 424-518 (795)
4 4db1_A Myosin-7; S1DC, cardiac 100.0 4.9E-37 1.7E-41 249.8 7.6 95 4-100 448-543 (783)
5 4anj_A Unconventional myosin-V 100.0 8.8E-37 3E-41 253.9 8.5 93 7-100 446-538 (1052)
6 1w9i_A Myosin II heavy chain; 100.0 1.3E-36 4.5E-41 246.9 8.2 90 10-100 447-538 (770)
7 1kk8_A Myosin heavy chain, str 100.0 1.6E-36 5.6E-41 248.2 7.4 95 4-100 447-542 (837)
8 2dfs_A Myosin-5A; myosin-V, in 100.0 2.2E-36 7.6E-41 252.4 7.8 95 4-100 424-518 (1080)
9 2ycu_A Non muscle myosin 2C, a 100.0 8.2E-36 2.8E-40 247.5 8.1 91 9-100 425-518 (995)
10 1g8x_A Myosin II heavy chain f 100.0 2.2E-35 7.7E-40 245.1 8.3 91 9-100 446-538 (1010)
11 1i84_S Smooth muscle myosin he 100.0 2.3E-35 7.7E-40 247.6 7.6 93 7-100 454-549 (1184)
12 1y4m_A HERV-FRD_6P24.1 proviru 57.0 2.5 8.6E-05 23.2 0.2 26 72-97 25-50 (53)
13 1mof_A Moloney murine leukemia 51.4 3.2 0.00011 23.0 0.1 26 72-97 27-52 (55)
14 3t5d_A Septin-7; GTP-binding p 29.3 70 0.0024 21.8 4.1 34 12-47 66-101 (274)
15 4g2k_A General control protein 21.3 30 0.001 22.1 0.8 27 72-98 78-104 (125)
16 3def_A T7I23.11 protein; chlor 20.5 41 0.0014 22.9 1.5 15 11-25 84-98 (262)
No 1
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=6.6e-38 Score=252.59 Aligned_cols=96 Identities=34% Similarity=0.572 Sum_probs=91.1
Q ss_pred CCCCCCceeEEeeeccCcccCCCCcchhhhhhhhhhhHhhhHHhhhhhhhHHHHhhhcCceeeeeeecCchhHHHhhhcC
Q psy324 4 QKKGSYRTLETQLGLKCYELMSNRDGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGK 83 (101)
Q Consensus 4 ~~~~~~~~~IgiLDi~GFE~~~~~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~ 83 (101)
.++.....+||||||||||+|+ .|+|||||||||||+||++|++++|+.++++|.+|||.|.+++|.||++|+|||++|
T Consensus 373 ~~~~~~~~~IGvLDI~GFE~f~-~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dN~~~idLie~k 451 (697)
T 1lkx_A 373 NCTTEKGPVIGILDIYGFEVFQ-NNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKK 451 (697)
T ss_dssp CCCSCCCCEEEEEECCCCCCCS-SBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHTTSS
T ss_pred CCCCCCceeEEeeccccccccC-cCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCHHHHHHHhcc
Confidence 3444558999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccchhhhhcCCC
Q psy324 84 PNGLLCVLDDQAKSCDR 100 (101)
Q Consensus 84 p~Gll~iLDee~~~~~~ 100 (101)
|.|||+||||||++|+.
T Consensus 452 p~GilslLDEec~~p~~ 468 (697)
T 1lkx_A 452 PIGLISLLDEACLIAKS 468 (697)
T ss_dssp SSSHHHHHHHHHHSTTC
T ss_pred cCChhhhhHHhhCCCCC
Confidence 99999999999999875
No 2
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=1.7e-37 Score=252.71 Aligned_cols=92 Identities=34% Similarity=0.651 Sum_probs=89.4
Q ss_pred CCceeEEeeeccCcccCCCCcchhhhhhhhhhhHhhhHHhhhhhhhHHHHhhhcCceeeeeeecCchhHHHhhhcCCCcc
Q psy324 8 SYRTLETQLGLKCYELMSNRDGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGL 87 (101)
Q Consensus 8 ~~~~~IgiLDi~GFE~~~~~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gl 87 (101)
....+||||||||||+|+ .|+|||||||||||+||++|++++|+.++++|.+|||.|.+++|.||++|+|||++||.||
T Consensus 443 ~~~~~IGvLDI~GFE~f~-~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idLie~kp~GI 521 (784)
T 2v26_A 443 TSSYFIGVLDIAGFEYFE-HNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGI 521 (784)
T ss_dssp CCSEEEEEEECCCCCCCS-SCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSH
T ss_pred cccceeeecccCCcccCC-cCCHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCCcccccccChHHHHHHHhhccccH
Confidence 457899999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhcCCC
Q psy324 88 LCVLDDQAKSCDR 100 (101)
Q Consensus 88 l~iLDee~~~~~~ 100 (101)
|+||||||++|+.
T Consensus 522 lslLDEe~~~p~~ 534 (784)
T 2v26_A 522 LDILDEENRLPQP 534 (784)
T ss_dssp HHHHHHHHHSSSC
T ss_pred HHHHHHHhcCCCC
Confidence 9999999999975
No 3
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=3.5e-37 Score=251.06 Aligned_cols=95 Identities=43% Similarity=0.700 Sum_probs=90.0
Q ss_pred CCCCCCceeEEeeeccCcccCCCCcchhhhhhhhhhhHhhhHHhhhhhhhHHHHhhhcCceeeeeeecCchhHHHhhhcC
Q psy324 4 QKKGSYRTLETQLGLKCYELMSNRDGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGK 83 (101)
Q Consensus 4 ~~~~~~~~~IgiLDi~GFE~~~~~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~ 83 (101)
.++.....+||||||||||+|+ .|+|||||||||||+||++|++++|+.++++|.+|||+|..++|.||++|+|||++|
T Consensus 424 ~~~~~~~~~IGvLDI~GFE~f~-~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~DN~~~idLie~~ 502 (795)
T 1w7j_A 424 HSTVKQHSFIGVLDIYGFETFE-INSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK 502 (795)
T ss_dssp CCSSCCSEEEEEEECCCCCCCS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCCCHHHHHHHHST
T ss_pred cCCccccceEEeeccCcccccC-cCCHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCcccccCccccHHHHHHHHhc
Confidence 3444568999999999999999 999999999999999999999999999999999999999999999999999999976
Q ss_pred CCcccccchhhhhcCCC
Q psy324 84 PNGLLCVLDDQAKSCDR 100 (101)
Q Consensus 84 p~Gll~iLDee~~~~~~ 100 (101)
.|||+||||||++|++
T Consensus 503 -~GIlslLDEec~~p~~ 518 (795)
T 1w7j_A 503 -MGVLDLLDEECKMPKG 518 (795)
T ss_dssp -TSHHHHHHHHHTSTTC
T ss_pred -CCHHHhhhhhccCCCC
Confidence 8999999999999986
No 4
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=4.9e-37 Score=249.84 Aligned_cols=95 Identities=39% Similarity=0.766 Sum_probs=88.4
Q ss_pred CCCCCCceeEEeeeccCcccCCCCcchhhhhhhhhhhHhhhHHhhhhhhhHHHHhhhcCceeeeeee-cCchhHHHhhhc
Q psy324 4 QKKGSYRTLETQLGLKCYELMSNRDGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG 82 (101)
Q Consensus 4 ~~~~~~~~~IgiLDi~GFE~~~~~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~ 82 (101)
.++.+..++||||||||||+|+ .|+|||||||||||+||++|++++|+.++++|.+|||.|..++| .||++|+|||++
T Consensus 448 ~~~~~~~~~IGvLDI~GFE~f~-~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~~Dn~~~idLiek 526 (783)
T 4db1_A 448 ETKQPRQYFIGVLDIAGFEIFD-FNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEK 526 (783)
T ss_dssp CCSCCCSEEEEEEECCCCCCCS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCGGGGGHHHHHHHHS
T ss_pred CCCCCCCceEEEeccccccccc-cCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCCcccccccCChHHHHHHHhC
Confidence 3445667899999999999999 99999999999999999999999999999999999999999999 599999999995
Q ss_pred CCCcccccchhhhhcCCC
Q psy324 83 KPNGLLCVLDDQAKSCDR 100 (101)
Q Consensus 83 ~p~Gll~iLDee~~~~~~ 100 (101)
|.|||+||||||++|+.
T Consensus 527 -p~Gil~lLDEec~~p~~ 543 (783)
T 4db1_A 527 -PMGIMSILEEECMFPKA 543 (783)
T ss_dssp -TTSHHHHHCC-TTCTTC
T ss_pred -CCchHhhhhHHhcCCCC
Confidence 89999999999999975
No 5
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=8.8e-37 Score=253.95 Aligned_cols=93 Identities=33% Similarity=0.641 Sum_probs=89.7
Q ss_pred CCCceeEEeeeccCcccCCCCcchhhhhhhhhhhHhhhHHhhhhhhhHHHHhhhcCceeeeeeecCchhHHHhhhcCCCc
Q psy324 7 GSYRTLETQLGLKCYELMSNRDGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNG 86 (101)
Q Consensus 7 ~~~~~~IgiLDi~GFE~~~~~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~G 86 (101)
.....+||||||||||+|+ .|||||||||||||+||++|++++|+.++++|.+|||.|..++|.||++|+|||+++|.|
T Consensus 446 ~~~~~~IGILDI~GFE~f~-~NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idLie~kp~G 524 (1052)
T 4anj_A 446 ETSSYFIGVLDIAGFEYFE-HNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVG 524 (1052)
T ss_dssp SCCSEEEEEEECCCCCCCS-SCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTS
T ss_pred ccccceEEEEecCCCcccc-cCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCcccCCcCCcHHHHHHHHcCccc
Confidence 3457899999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhcCCC
Q psy324 87 LLCVLDDQAKSCDR 100 (101)
Q Consensus 87 ll~iLDee~~~~~~ 100 (101)
||++|||||++|+.
T Consensus 525 Il~lLDEe~~~p~~ 538 (1052)
T 4anj_A 525 ILDILDEENRLPQP 538 (1052)
T ss_dssp HHHHHHHHHHSSSC
T ss_pred HHHHHHHHhcCCCC
Confidence 99999999999975
No 6
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=1.3e-36 Score=246.90 Aligned_cols=90 Identities=42% Similarity=0.793 Sum_probs=87.2
Q ss_pred ceeEEeeeccCcccCCCCcchhhhhhhhhhhHhhhHHhhhhhhhHHHHhhhcCceeeeeee-cCchhHHHhhhcC-CCcc
Q psy324 10 RTLETQLGLKCYELMSNRDGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK-PNGL 87 (101)
Q Consensus 10 ~~~IgiLDi~GFE~~~~~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~~-p~Gl 87 (101)
..+||||||||||+|+ .|+|||||||||||+||++|++++|+.++++|.+|||.|..++| .||++|+|||+++ |.||
T Consensus 447 ~~~IGvLDI~GFE~F~-~NsFEQlCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek~~p~Gi 525 (770)
T 1w9i_A 447 AYFIGVLDIYGFEIFK-VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGI 525 (770)
T ss_dssp SEEEEEEECCCCCCCS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGGGHHHHHHHHCTTTTCH
T ss_pred CCeeeeccCccccccc-cCCHHHHHHHhhHHHHHHHHHhhhhHHHHHHhhccCCCceeeccccCcHHHHHHHhCCCCCch
Confidence 8899999999999999 99999999999999999999999999999999999999999999 5999999999974 9999
Q ss_pred cccchhhhhcCCC
Q psy324 88 LCVLDDQAKSCDR 100 (101)
Q Consensus 88 l~iLDee~~~~~~ 100 (101)
|+||||||++|+.
T Consensus 526 lslLDEec~~p~~ 538 (770)
T 1w9i_A 526 LALLDEQSVFPNA 538 (770)
T ss_dssp HHHHHHHHSSSSC
T ss_pred hhhhhhhhCCCCC
Confidence 9999999999975
No 7
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=1.6e-36 Score=248.16 Aligned_cols=95 Identities=41% Similarity=0.781 Sum_probs=89.6
Q ss_pred CCCCCCceeEEeeeccCcccCCCCcchhhhhhhhhhhHhhhHHhhhhhhhHHHHhhhcCceeeeeee-cCchhHHHhhhc
Q psy324 4 QKKGSYRTLETQLGLKCYELMSNRDGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG 82 (101)
Q Consensus 4 ~~~~~~~~~IgiLDi~GFE~~~~~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~ 82 (101)
.++.....+||||||||||+|+ .|+|||||||||||+||++|++++|+.|+++|.+|||.|..++| .||++|+|||++
T Consensus 447 ~~~~~~~~~IGvLDI~GFE~f~-~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek 525 (837)
T 1kk8_A 447 DTKAKRNYYIGVLDIAGFEIFD-FNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK 525 (837)
T ss_dssp CCCCCCCEEEEEEECCCCCCCS-SBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHHHHHHHS
T ss_pred cCCCCCcceEEEEecCCccccc-cccHHHHHHHHhhHHHHHHHHHhhhHHHHHHhhhcCCceeecccccCHHHHHHHHhc
Confidence 3445568999999999999999 99999999999999999999999999999999999999999999 599999999996
Q ss_pred CCCcccccchhhhhcCCC
Q psy324 83 KPNGLLCVLDDQAKSCDR 100 (101)
Q Consensus 83 ~p~Gll~iLDee~~~~~~ 100 (101)
|.|||+||||||++|+.
T Consensus 526 -p~GIlslLDEec~~p~~ 542 (837)
T 1kk8_A 526 -PMGILSILEEECMFPKA 542 (837)
T ss_dssp -TTSHHHHHHHHTTCTTC
T ss_pred -CCcHHHHHHHHhcCCCC
Confidence 89999999999999975
No 8
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=2.2e-36 Score=252.36 Aligned_cols=95 Identities=43% Similarity=0.700 Sum_probs=90.1
Q ss_pred CCCCCCceeEEeeeccCcccCCCCcchhhhhhhhhhhHhhhHHhhhhhhhHHHHhhhcCceeeeeeecCchhHHHhhhcC
Q psy324 4 QKKGSYRTLETQLGLKCYELMSNRDGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGK 83 (101)
Q Consensus 4 ~~~~~~~~~IgiLDi~GFE~~~~~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~ 83 (101)
.++.+...+||||||||||+|+ .|||||||||||||+||++|++++|+.++++|..|||.|.+++|.||++|+|||++|
T Consensus 424 ~~~~~~~~~IgvLDI~GFE~f~-~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dn~~~idlie~~ 502 (1080)
T 2dfs_A 424 HSTVKQHSFIGVLDIYGFETFE-INSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK 502 (1080)
T ss_dssp CCSSCCCEEEEEEEECCCCCCS-SBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCCCCCHHHHHHHHST
T ss_pred ccccccCceEEeeccCCccccC-cCCHHHHHHHhhhHHHHHHHHHHhhHHHHHHHhhcCCccccccccccHHHHHHHhcC
Confidence 3445568999999999999999 999999999999999999999999999999999999999999999999999999976
Q ss_pred CCcccccchhhhhcCCC
Q psy324 84 PNGLLCVLDDQAKSCDR 100 (101)
Q Consensus 84 p~Gll~iLDee~~~~~~ 100 (101)
.|||+||||||++|++
T Consensus 503 -~Gil~lLdee~~~p~~ 518 (1080)
T 2dfs_A 503 -MGVLDLLDEECKMPKG 518 (1080)
T ss_dssp -TSHHHHHHHHTTSTTC
T ss_pred -CceeeeccccccCCCC
Confidence 8999999999999986
No 9
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=8.2e-36 Score=247.45 Aligned_cols=91 Identities=41% Similarity=0.744 Sum_probs=87.8
Q ss_pred CceeEEeeeccCcccCCCCcchhhhhhhhhhhHhhhHHhhhhhhhHHHHhhhcCceeeeeee-cCchhHHHhhhc--CCC
Q psy324 9 YRTLETQLGLKCYELMSNRDGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG--KPN 85 (101)
Q Consensus 9 ~~~~IgiLDi~GFE~~~~~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~--~p~ 85 (101)
...+||||||||||+|+ .|+|||||||||||+||++|++++|+.++++|.+|||.|..++| .||++|+|||++ +|.
T Consensus 425 ~~~~IgvLDI~GFE~f~-~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~ 503 (995)
T 2ycu_A 425 GASFLGILDIAGFEIFQ-LNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPP 503 (995)
T ss_dssp CSEEEEEEECCCBCCCS-SBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSC
T ss_pred ccceEEEeccccccccc-cchHHHHHHHhhHHHHHHHHHHhhhHHHHHHHhccCCCccccccccChHHHHHHHhccCCCC
Confidence 67999999999999999 99999999999999999999999999999999999999999999 699999999997 489
Q ss_pred cccccchhhhhcCCC
Q psy324 86 GLLCVLDDQAKSCDR 100 (101)
Q Consensus 86 Gll~iLDee~~~~~~ 100 (101)
|||+||||||++|++
T Consensus 504 Gil~lLdee~~~p~~ 518 (995)
T 2ycu_A 504 GLLALLDEECWFPKA 518 (995)
T ss_dssp CHHHHHHHSSSSTTC
T ss_pred chhhhhHHHhcCCCC
Confidence 999999999999975
No 10
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=2.2e-35 Score=245.07 Aligned_cols=91 Identities=42% Similarity=0.776 Sum_probs=87.8
Q ss_pred CceeEEeeeccCcccCCCCcchhhhhhhhhhhHhhhHHhhhhhhhHHHHhhhcCceeeeeee-cCchhHHHhhhc-CCCc
Q psy324 9 YRTLETQLGLKCYELMSNRDGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG-KPNG 86 (101)
Q Consensus 9 ~~~~IgiLDi~GFE~~~~~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~-~p~G 86 (101)
...+||||||||||+|+ .|+|||||||||||+||++|++++|+.++++|.+|||.|..++| .||++|+|||++ +|.|
T Consensus 446 ~~~~IgvLDI~GFE~f~-~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~~G 524 (1010)
T 1g8x_A 446 KAYFIGVLDISGFEIFK-VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPG 524 (1010)
T ss_dssp CSEEEEEEECCCCCCCS-SBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCSHHHHHHHHCTTTTC
T ss_pred cCceeeeccCcccccCC-cCcHHHHHHHhhhHHHHHHHHHHhhHHHHHHhhccCCCccccccccChHHHHHHHhcCCCCe
Confidence 67899999999999999 99999999999999999999999999999999999999999999 599999999997 4999
Q ss_pred ccccchhhhhcCCC
Q psy324 87 LLCVLDDQAKSCDR 100 (101)
Q Consensus 87 ll~iLDee~~~~~~ 100 (101)
||+||||||++|+.
T Consensus 525 il~lLdee~~~p~~ 538 (1010)
T 1g8x_A 525 ILALLDEQSVFPNA 538 (1010)
T ss_dssp HHHHHHHHTTSSSC
T ss_pred eehhhhHHhCCCCC
Confidence 99999999999985
No 11
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=100.00 E-value=2.3e-35 Score=247.59 Aligned_cols=93 Identities=40% Similarity=0.724 Sum_probs=85.8
Q ss_pred CCCceeEEeeeccCcccCCCCcchhhhhhhhhhhHhhhHHhhhhhhhHHHHhhhcCceeeeeee-cCchhHHHhhhcC--
Q psy324 7 GSYRTLETQLGLKCYELMSNRDGFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK-- 83 (101)
Q Consensus 7 ~~~~~~IgiLDi~GFE~~~~~n~~eql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~~-- 83 (101)
.....+||||||||||+|. .|||||||||||||+||++|++++|..++++|..|||.|.+++| .||++|+|||++|
T Consensus 454 ~~~~~~IgvLDi~GFE~f~-~NsfeQlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~ 532 (1184)
T 1i84_S 454 RQGASFLGILDIAGFEIFE-INSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTN 532 (1184)
T ss_dssp ---CEEEEEEECCCCCCCS-SBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHHHHTTSCCSS
T ss_pred cCCcceEEEeecCCcCCCC-cchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCccccccCCCcHHHHHHHhCCCC
Confidence 4467899999999999999 99999999999999999999999999999999999999999999 5999999999962
Q ss_pred CCcccccchhhhhcCCC
Q psy324 84 PNGLLCVLDDQAKSCDR 100 (101)
Q Consensus 84 p~Gll~iLDee~~~~~~ 100 (101)
|+|||+||||||++|+.
T Consensus 533 ~~Gil~lLdee~~~p~~ 549 (1184)
T 1i84_S 533 PPGVLALLDEECWFPKA 549 (1184)
T ss_dssp SCCHHHHHHHTTSCTTC
T ss_pred CCCchhhhhhhhCCCCC
Confidence 34999999999999975
No 12
>1y4m_A HERV-FRD_6P24.1 provirus ancestral ENV polyprotei; coat protein, membrane fusion, endogenous retrovirus, membra protein; 1.60A {Homo sapiens} SCOP: h.3.2.1
Probab=56.97 E-value=2.5 Score=23.24 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=22.8
Q ss_pred CchhHHHhhhcCCCcccccchhhhhc
Q psy324 72 DNTLCLQLVEGKPNGLLCVLDDQAKS 97 (101)
Q Consensus 72 dn~~~ldli~~~p~Gll~iLDee~~~ 97 (101)
.|...+|++..+..|+=..|.|+|.|
T Consensus 25 QNRraLDlL~a~~GG~C~~l~e~CC~ 50 (53)
T 1y4m_A 25 QNRRGLDMLTAAQGGICLALDEKCCF 50 (53)
T ss_dssp HHHHHHHHHTGGGTSHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHhCCccHHhcCchhc
Confidence 57788999988889999999999976
No 13
>1mof_A Moloney murine leukemia virus P15; glycoprotein, coat protein, polyprotein, transmembrane, SIGN protein; 1.70A {Moloney murine leukemia virus} SCOP: h.3.2.1
Probab=51.43 E-value=3.2 Score=22.97 Aligned_cols=26 Identities=27% Similarity=0.280 Sum_probs=22.8
Q ss_pred CchhHHHhhhcCCCcccccchhhhhc
Q psy324 72 DNTLCLQLVEGKPNGLLCVLDDQAKS 97 (101)
Q Consensus 72 dn~~~ldli~~~p~Gll~iLDee~~~ 97 (101)
.|...+|++..+..|+=..|.|+|.|
T Consensus 27 QNRraLD~L~a~~GG~C~~l~e~CCf 52 (55)
T 1mof_A 27 QNRRGLDLLFLKEGGLCAALKEECAF 52 (55)
T ss_dssp HHHHHHHHHTGGGTCHHHHHTSCCCC
T ss_pred HHHHHHHHHHHHhCCccHHHcCchhc
Confidence 57788999988889999999999976
No 14
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=29.34 E-value=70 Score=21.81 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=20.2
Q ss_pred eEEeeeccCcccCCCCc--chhhhhhhhhhhHhhhHHh
Q psy324 12 LETQLGLKCYELMSNRD--GFEQLCINYANEHLQYYFN 47 (101)
Q Consensus 12 ~IgiLDi~GFE~~~~~n--~~eql~iN~~nE~l~~~~~ 47 (101)
.+-|+|+|||..+. .+ .+ +-.+.|..++...|+.
T Consensus 66 ~l~liDTpG~~d~~-~~~~~~-~~i~~~i~~~~~~~l~ 101 (274)
T 3t5d_A 66 LLTIVDTPGFGDAV-DNSNCW-QPVIDYIDSKFEDYLN 101 (274)
T ss_dssp EEEEEECCCCSCCS-CCTTTT-HHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCccccc-cchhhH-HHHHHHHHHHHHHHHH
Confidence 68899999997654 22 23 3334555555554443
No 15
>4g2k_A General control protein GCN4, envelope glycoprote chimera; GP2-GCN4 fusion, viral protein; 1.90A {Saccharomyces cerevisiae}
Probab=21.29 E-value=30 Score=22.06 Aligned_cols=27 Identities=15% Similarity=0.072 Sum_probs=23.0
Q ss_pred CchhHHHhhhcCCCcccccchhhhhcC
Q psy324 72 DNTLCLQLVEGKPNGLLCVLDDQAKSC 98 (101)
Q Consensus 72 dn~~~ldli~~~p~Gll~iLDee~~~~ 98 (101)
-|...+|++.....|+=..|.++|.|-
T Consensus 78 QNRraLD~Lla~qGG~C~~l~e~CCfy 104 (125)
T 4g2k_A 78 INRHAIDFLLTRWGGTCKVLGPDCSIG 104 (125)
T ss_dssp HHHHHHHHHHGGGTCHHHHHCGGGGCC
T ss_pred HHHHHHHHHHHHcCCcHHHhcccceee
Confidence 467789999888899999999999874
No 16
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=20.48 E-value=41 Score=22.87 Aligned_cols=15 Identities=0% Similarity=-0.299 Sum_probs=12.2
Q ss_pred eeEEeeeccCcccCC
Q psy324 11 TLETQLGLKCYELMS 25 (101)
Q Consensus 11 ~~IgiLDi~GFE~~~ 25 (101)
..+.|+|+||++.+.
T Consensus 84 ~~l~liDTpG~~~~~ 98 (262)
T 3def_A 84 FTINIIDTPGLVEAG 98 (262)
T ss_dssp EEEEEEECCCSEETT
T ss_pred eeEEEEECCCCCCcc
Confidence 367899999998764
Done!