Query psy3240
Match_columns 274
No_of_seqs 332 out of 1782
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 19:56:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2n_A D-isomer specific 2-hyd 100.0 9.5E-49 3.2E-53 369.0 24.2 205 9-273 138-345 (345)
2 3kb6_A D-lactate dehydrogenase 100.0 1.4E-49 4.8E-54 372.9 16.6 204 9-273 108-328 (334)
3 4e5n_A Thermostable phosphite 100.0 7.5E-48 2.6E-52 360.6 21.2 206 9-273 111-326 (330)
4 4hy3_A Phosphoglycerate oxidor 100.0 5.9E-47 2E-51 359.1 23.6 204 9-273 141-348 (365)
5 3gg9_A D-3-phosphoglycerate de 100.0 3.6E-47 1.2E-51 359.0 20.4 205 9-273 118-333 (352)
6 3pp8_A Glyoxylate/hydroxypyruv 100.0 7.2E-47 2.5E-51 352.1 19.3 200 9-274 109-311 (315)
7 3evt_A Phosphoglycerate dehydr 100.0 8.4E-47 2.9E-51 352.9 19.8 204 9-274 105-312 (324)
8 3hg7_A D-isomer specific 2-hyd 100.0 6.3E-47 2.2E-51 353.9 18.8 201 9-274 110-312 (324)
9 3jtm_A Formate dehydrogenase, 100.0 1.8E-46 6.1E-51 354.2 18.3 205 9-272 130-340 (351)
10 2yq5_A D-isomer specific 2-hyd 100.0 3.2E-46 1.1E-50 351.6 19.2 204 9-274 114-333 (343)
11 2pi1_A D-lactate dehydrogenase 100.0 1.1E-46 3.7E-51 353.3 16.0 205 9-274 108-329 (334)
12 4dgs_A Dehydrogenase; structur 100.0 1.1E-45 3.8E-50 347.5 19.9 201 9-273 137-340 (340)
13 3k5p_A D-3-phosphoglycerate de 100.0 6.3E-45 2.1E-49 350.2 21.8 202 9-274 124-332 (416)
14 1j4a_A D-LDH, D-lactate dehydr 100.0 1.5E-44 5.1E-49 338.3 21.1 203 9-274 114-332 (333)
15 2nac_A NAD-dependent formate d 100.0 1.1E-44 3.6E-49 346.7 19.5 206 9-273 157-366 (393)
16 1sc6_A PGDH, D-3-phosphoglycer 100.0 1.5E-44 5.1E-49 346.7 20.1 202 9-274 113-321 (404)
17 2j6i_A Formate dehydrogenase; 100.0 1.3E-44 4.4E-49 342.8 18.0 205 9-272 130-347 (364)
18 1xdw_A NAD+-dependent (R)-2-hy 100.0 4E-44 1.4E-48 335.1 18.7 203 9-273 113-331 (331)
19 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 1.2E-43 4.1E-48 332.9 20.6 200 9-270 133-334 (335)
20 2cuk_A Glycerate dehydrogenase 100.0 4.9E-43 1.7E-47 325.4 23.4 200 9-272 109-310 (311)
21 1dxy_A D-2-hydroxyisocaproate 100.0 4.5E-44 1.6E-48 335.1 15.8 204 9-274 112-330 (333)
22 1gdh_A D-glycerate dehydrogena 100.0 8.1E-43 2.8E-47 324.9 22.7 202 9-270 111-316 (320)
23 1qp8_A Formate dehydrogenase; 100.0 4.8E-43 1.6E-47 324.5 20.9 198 9-273 93-296 (303)
24 1wwk_A Phosphoglycerate dehydr 100.0 7.9E-43 2.7E-47 323.3 22.0 196 9-265 110-307 (307)
25 2ekl_A D-3-phosphoglycerate de 100.0 9.9E-43 3.4E-47 323.4 19.5 197 9-269 112-313 (313)
26 2gcg_A Glyoxylate reductase/hy 100.0 7.2E-42 2.5E-46 319.3 23.5 208 9-274 120-330 (330)
27 1mx3_A CTBP1, C-terminal bindi 100.0 1.1E-41 3.7E-46 321.0 22.0 207 9-273 129-346 (347)
28 3gvx_A Glycerate dehydrogenase 100.0 5E-42 1.7E-46 316.3 17.2 189 9-267 92-284 (290)
29 3ba1_A HPPR, hydroxyphenylpyru 100.0 4.8E-41 1.6E-45 315.0 20.6 200 9-273 131-333 (333)
30 2w2k_A D-mandelate dehydrogena 100.0 4.4E-41 1.5E-45 316.5 18.2 207 9-274 124-339 (348)
31 2dbq_A Glyoxylate reductase; D 100.0 8E-41 2.8E-45 312.8 19.4 206 9-273 111-322 (334)
32 2d0i_A Dehydrogenase; structur 100.0 9E-41 3.1E-45 312.6 19.6 204 9-273 108-318 (333)
33 3oet_A Erythronate-4-phosphate 100.0 3.5E-39 1.2E-43 307.2 15.2 168 37-267 114-285 (381)
34 1ygy_A PGDH, D-3-phosphoglycer 100.0 9.5E-38 3.2E-42 308.2 23.0 204 9-274 110-315 (529)
35 2o4c_A Erythronate-4-phosphate 100.0 5.1E-38 1.8E-42 299.2 15.0 170 37-269 111-284 (380)
36 3d64_A Adenosylhomocysteinase; 100.0 2.3E-29 7.9E-34 246.5 7.5 170 36-273 271-446 (494)
37 1v8b_A Adenosylhomocysteinase; 99.9 2.2E-28 7.6E-33 238.7 9.9 173 36-273 251-431 (479)
38 1gtm_A Glutamate dehydrogenase 99.8 8E-22 2.7E-26 189.8 3.4 156 36-263 205-385 (419)
39 3ce6_A Adenosylhomocysteinase; 99.8 2.2E-20 7.4E-25 183.1 9.0 171 37-272 269-445 (494)
40 2vhw_A Alanine dehydrogenase; 99.7 3.1E-16 1.1E-20 148.4 15.1 130 38-246 164-307 (377)
41 3n58_A Adenosylhomocysteinase; 99.7 4.7E-17 1.6E-21 157.4 8.5 104 37-144 242-347 (464)
42 3h9u_A Adenosylhomocysteinase; 99.7 1.3E-16 4.3E-21 154.0 8.9 104 37-144 206-311 (436)
43 3ggo_A Prephenate dehydrogenas 99.7 1.7E-15 5.8E-20 140.0 15.4 172 18-251 11-189 (314)
44 3obb_A Probable 3-hydroxyisobu 99.6 5.6E-16 1.9E-20 142.7 7.6 114 43-156 4-121 (300)
45 3gvp_A Adenosylhomocysteinase 99.6 1.1E-15 3.6E-20 147.4 8.6 103 37-143 215-319 (435)
46 2rir_A Dipicolinate synthase, 99.6 3.3E-15 1.1E-19 136.6 10.7 114 36-157 151-268 (300)
47 4gbj_A 6-phosphogluconate dehy 99.6 1.8E-15 6.2E-20 138.8 8.6 115 43-157 6-122 (297)
48 3d4o_A Dipicolinate synthase s 99.6 3.8E-15 1.3E-19 135.9 10.0 109 37-154 150-263 (293)
49 2eez_A Alanine dehydrogenase; 99.6 2.7E-15 9.3E-20 141.2 7.6 158 38-272 162-340 (369)
50 3doj_A AT3G25530, dehydrogenas 99.6 8.2E-15 2.8E-19 134.4 10.1 121 35-155 14-138 (310)
51 3ktd_A Prephenate dehydrogenas 99.5 2E-14 6.8E-19 134.8 10.6 142 42-242 8-155 (341)
52 3l6d_A Putative oxidoreductase 99.5 8.9E-15 3.1E-19 134.1 7.0 119 38-156 5-125 (306)
53 2g5c_A Prephenate dehydrogenas 99.5 1.4E-13 4.8E-18 123.5 13.6 148 43-250 2-156 (281)
54 4dll_A 2-hydroxy-3-oxopropiona 99.5 2.4E-14 8.3E-19 131.9 8.7 118 39-156 28-148 (320)
55 3qha_A Putative oxidoreductase 99.5 1E-13 3.6E-18 126.3 11.9 113 42-156 15-129 (296)
56 4e21_A 6-phosphogluconate dehy 99.5 1E-13 3.5E-18 130.6 10.6 115 40-156 20-139 (358)
57 3qsg_A NAD-binding phosphogluc 99.5 1.6E-13 5.6E-18 126.1 10.8 131 23-156 6-143 (312)
58 3pef_A 6-phosphogluconate dehy 99.5 1.5E-13 5E-18 124.2 9.7 113 43-155 2-118 (287)
59 3b1f_A Putative prephenate deh 99.4 3.1E-13 1.1E-17 121.7 10.6 146 42-243 6-158 (290)
60 3pdu_A 3-hydroxyisobutyrate de 99.4 1.3E-13 4.5E-18 124.5 7.5 114 43-156 2-119 (287)
61 3g0o_A 3-hydroxyisobutyrate de 99.4 1.5E-13 5.2E-18 125.3 6.8 115 41-155 6-125 (303)
62 2h78_A Hibadh, 3-hydroxyisobut 99.4 2.9E-13 9.9E-18 122.8 8.0 114 43-156 4-121 (302)
63 2pv7_A T-protein [includes: ch 99.4 1.7E-12 5.8E-17 118.4 12.9 106 42-191 21-127 (298)
64 4ezb_A Uncharacterized conserv 99.4 1.2E-12 3.9E-17 120.9 9.5 112 42-156 24-145 (317)
65 2f1k_A Prephenate dehydrogenas 99.4 7.5E-12 2.6E-16 111.9 13.2 99 43-144 1-103 (279)
66 3dtt_A NADP oxidoreductase; st 99.3 9E-13 3.1E-17 117.0 5.9 105 25-132 2-124 (245)
67 1c1d_A L-phenylalanine dehydro 99.3 2.9E-12 1E-16 120.8 9.1 111 37-154 169-282 (355)
68 4gwg_A 6-phosphogluconate dehy 99.3 4.4E-12 1.5E-16 124.0 10.6 114 42-156 4-127 (484)
69 2zyd_A 6-phosphogluconate dehy 99.3 4.6E-12 1.6E-16 123.5 9.3 117 39-156 12-137 (480)
70 3p2y_A Alanine dehydrogenase/p 99.3 3.6E-12 1.2E-16 121.2 8.0 124 39-191 181-335 (381)
71 1yb4_A Tartronic semialdehyde 99.3 4.2E-12 1.4E-16 114.1 8.0 113 43-156 4-120 (295)
72 1vpd_A Tartronate semialdehyde 99.3 4.9E-12 1.7E-16 114.0 8.1 114 43-156 6-123 (299)
73 3cky_A 2-hydroxymethyl glutara 99.3 6.8E-12 2.3E-16 113.2 7.9 113 43-155 5-121 (301)
74 2p4q_A 6-phosphogluconate dehy 99.3 1.1E-11 3.8E-16 121.4 9.9 114 42-156 10-133 (497)
75 1np3_A Ketol-acid reductoisome 99.3 8.9E-13 3E-17 122.8 1.8 94 38-132 12-107 (338)
76 2cvz_A Dehydrogenase, 3-hydrox 99.3 8.7E-12 3E-16 111.5 7.8 112 43-156 2-114 (289)
77 2gf2_A Hibadh, 3-hydroxyisobut 99.2 9.7E-12 3.3E-16 111.9 8.0 113 43-155 1-117 (296)
78 1gpj_A Glutamyl-tRNA reductase 99.2 2.6E-12 8.7E-17 122.5 4.3 139 39-267 164-326 (404)
79 1x13_A NAD(P) transhydrogenase 99.2 1.3E-11 4.5E-16 117.7 9.2 100 39-139 169-301 (401)
80 2uyy_A N-PAC protein; long-cha 99.2 2E-11 6.9E-16 111.3 8.6 114 43-156 31-148 (316)
81 4e12_A Diketoreductase; oxidor 99.2 7.9E-11 2.7E-15 106.5 12.0 100 43-144 5-131 (283)
82 4dio_A NAD(P) transhydrogenase 99.2 3.7E-11 1.3E-15 115.1 8.7 124 39-191 187-345 (405)
83 1l7d_A Nicotinamide nucleotide 99.2 7.6E-11 2.6E-15 111.5 10.3 99 38-137 168-301 (384)
84 3fr7_A Putative ketol-acid red 99.2 1.4E-11 4.7E-16 120.5 5.2 108 22-136 37-158 (525)
85 2iz1_A 6-phosphogluconate dehy 99.2 4.4E-11 1.5E-15 116.2 8.2 113 43-156 6-127 (474)
86 2pgd_A 6-phosphogluconate dehy 99.2 8.2E-11 2.8E-15 114.5 9.9 113 43-156 3-125 (482)
87 1i36_A Conserved hypothetical 99.1 6.8E-11 2.3E-15 104.8 7.8 101 43-149 1-105 (264)
88 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.1 1.3E-10 4.4E-15 113.1 8.7 113 43-156 2-127 (478)
89 1zej_A HBD-9, 3-hydroxyacyl-CO 99.1 6.4E-11 2.2E-15 108.8 5.9 93 40-136 10-112 (293)
90 2d5c_A AROE, shikimate 5-dehyd 99.1 1.9E-10 6.4E-15 102.8 8.5 112 37-155 112-227 (263)
91 3ond_A Adenosylhomocysteinase; 99.1 2.8E-10 9.7E-15 111.2 8.5 95 37-135 260-355 (488)
92 3c24_A Putative oxidoreductase 99.0 2E-10 6.7E-15 103.5 6.8 91 43-135 12-104 (286)
93 2dpo_A L-gulonate 3-dehydrogen 99.0 5.6E-10 1.9E-14 103.5 10.0 101 42-144 6-133 (319)
94 1leh_A Leucine dehydrogenase; 99.0 2.7E-10 9.4E-15 107.7 7.6 113 39-158 170-286 (364)
95 2hk9_A Shikimate dehydrogenase 99.0 2.8E-10 9.6E-15 102.8 6.5 111 37-155 124-240 (275)
96 2yjz_A Metalloreductase steap4 98.6 4.1E-11 1.4E-15 103.9 0.0 94 40-137 17-110 (201)
97 3d1l_A Putative NADP oxidoredu 99.0 4.5E-10 1.5E-14 99.7 5.9 100 37-138 5-108 (266)
98 3k6j_A Protein F01G10.3, confi 98.9 2.4E-09 8.2E-14 104.1 10.3 98 43-144 55-176 (460)
99 3dfu_A Uncharacterized protein 98.9 2.1E-09 7.1E-14 95.9 8.4 102 41-195 5-107 (232)
100 2q3e_A UDP-glucose 6-dehydroge 98.9 2.8E-09 9.5E-14 103.2 9.3 106 43-148 6-147 (467)
101 2i99_A MU-crystallin homolog; 98.9 1.2E-09 4E-14 100.6 6.1 110 40-156 133-249 (312)
102 2vns_A Metalloreductase steap3 98.9 2.2E-09 7.6E-14 93.3 5.9 94 41-138 27-121 (215)
103 2rcy_A Pyrroline carboxylate r 98.8 7.7E-09 2.6E-13 91.2 9.1 87 42-135 4-95 (262)
104 3pid_A UDP-glucose 6-dehydroge 98.8 8.2E-09 2.8E-13 99.6 9.5 114 36-151 30-172 (432)
105 2izz_A Pyrroline-5-carboxylate 98.8 8.4E-09 2.9E-13 94.8 8.9 104 40-147 20-131 (322)
106 3oj0_A Glutr, glutamyl-tRNA re 98.8 5.7E-09 2E-13 84.6 6.8 91 42-138 21-116 (144)
107 3gt0_A Pyrroline-5-carboxylate 98.8 6.1E-09 2.1E-13 91.9 7.3 98 43-144 3-107 (247)
108 1f0y_A HCDH, L-3-hydroxyacyl-C 98.8 7.6E-09 2.6E-13 93.9 7.7 100 43-144 16-146 (302)
109 2raf_A Putative dinucleotide-b 98.8 6.7E-09 2.3E-13 89.9 6.6 80 38-136 15-94 (209)
110 1pjc_A Protein (L-alanine dehy 98.7 8.1E-09 2.8E-13 96.7 6.1 129 39-191 164-304 (361)
111 4a7p_A UDP-glucose dehydrogena 98.7 6.4E-08 2.2E-12 93.6 12.5 108 42-150 8-147 (446)
112 2ahr_A Putative pyrroline carb 98.7 1.9E-08 6.3E-13 88.9 7.7 94 43-144 4-100 (259)
113 1mv8_A GMD, GDP-mannose 6-dehy 98.7 2.2E-08 7.5E-13 95.9 8.7 106 43-149 1-141 (436)
114 2qrj_A Saccharopine dehydrogen 98.7 6.5E-09 2.2E-13 99.2 4.9 124 41-191 213-346 (394)
115 3mog_A Probable 3-hydroxybutyr 98.7 1.1E-08 3.7E-13 99.9 6.2 99 42-144 5-130 (483)
116 3gg2_A Sugar dehydrogenase, UD 98.7 5.5E-08 1.9E-12 94.0 10.1 107 43-150 3-140 (450)
117 1yqg_A Pyrroline-5-carboxylate 98.7 1.1E-08 3.7E-13 90.3 4.7 104 43-156 1-109 (263)
118 3tri_A Pyrroline-5-carboxylate 98.7 4.4E-08 1.5E-12 88.6 8.4 101 42-146 3-110 (280)
119 1y81_A Conserved hypothetical 98.7 6.1E-08 2.1E-12 79.4 7.9 105 40-155 12-121 (138)
120 1bg6_A N-(1-D-carboxylethyl)-L 98.6 1.2E-07 4E-12 87.0 10.2 103 43-148 5-124 (359)
121 2egg_A AROE, shikimate 5-dehyd 98.6 1.1E-07 3.8E-12 87.0 8.9 113 38-155 137-261 (297)
122 1jay_A Coenzyme F420H2:NADP+ o 98.6 5E-08 1.7E-12 83.3 5.8 91 43-136 1-101 (212)
123 3don_A Shikimate dehydrogenase 98.6 7.5E-08 2.6E-12 87.7 7.2 114 37-155 112-231 (277)
124 3phh_A Shikimate dehydrogenase 98.6 7E-08 2.4E-12 87.7 6.4 110 42-155 118-229 (269)
125 2dc1_A L-aspartate dehydrogena 98.6 1.7E-07 5.7E-12 82.3 8.7 100 43-152 1-104 (236)
126 4huj_A Uncharacterized protein 98.6 8.3E-08 2.8E-12 83.5 6.5 90 42-135 23-116 (220)
127 3ulk_A Ketol-acid reductoisome 98.5 2.4E-07 8.3E-12 89.5 10.1 95 38-135 33-134 (491)
128 1txg_A Glycerol-3-phosphate de 98.5 1.3E-07 4.4E-12 86.0 7.6 90 43-135 1-107 (335)
129 2ew2_A 2-dehydropantoate 2-red 98.5 1.2E-07 4.3E-12 84.8 6.8 102 43-147 4-122 (316)
130 1dlj_A UDP-glucose dehydrogena 98.5 2.6E-07 8.9E-12 87.7 9.1 103 43-148 1-133 (402)
131 2y0c_A BCEC, UDP-glucose dehyd 98.5 2.7E-07 9.2E-12 89.8 9.4 107 41-148 7-144 (478)
132 1zcj_A Peroxisomal bifunctiona 98.5 2.8E-07 9.6E-12 89.2 9.2 100 42-144 37-160 (463)
133 1wdk_A Fatty oxidation complex 98.5 7.9E-08 2.7E-12 97.9 5.5 91 42-133 314-431 (715)
134 1evy_A Glycerol-3-phosphate de 98.5 4.7E-08 1.6E-12 90.7 3.3 92 44-136 17-128 (366)
135 2o3j_A UDP-glucose 6-dehydroge 98.5 2.6E-07 8.9E-12 89.8 8.7 105 43-148 10-151 (481)
136 3k96_A Glycerol-3-phosphate de 98.5 1.9E-07 6.3E-12 87.6 7.2 96 41-138 28-139 (356)
137 1ks9_A KPA reductase;, 2-dehyd 98.5 3.3E-07 1.1E-11 81.2 8.1 90 43-134 1-99 (291)
138 3ojo_A CAP5O; rossmann fold, c 98.5 6.2E-07 2.1E-11 86.4 10.4 108 39-146 8-143 (431)
139 1x0v_A GPD-C, GPDH-C, glycerol 98.5 2.4E-07 8.3E-12 85.2 7.3 93 42-136 8-128 (354)
140 3g79_A NDP-N-acetyl-D-galactos 98.4 4.4E-07 1.5E-11 88.5 9.0 102 43-144 19-159 (478)
141 1yj8_A Glycerol-3-phosphate de 98.4 2E-07 6.7E-12 87.1 6.3 91 43-135 22-144 (375)
142 3u62_A Shikimate dehydrogenase 98.4 2.4E-07 8.3E-12 83.1 6.4 108 39-155 106-220 (253)
143 1z82_A Glycerol-3-phosphate de 98.4 2.4E-07 8.2E-12 85.2 6.5 99 42-147 14-127 (335)
144 3c85_A Putative glutathione-re 98.4 4.5E-07 1.5E-11 75.8 7.4 111 38-155 35-157 (183)
145 1b0a_A Protein (fold bifunctio 98.4 4.5E-07 1.5E-11 83.1 7.8 80 37-135 154-234 (288)
146 2duw_A Putative COA-binding pr 98.4 2.2E-07 7.5E-12 76.5 5.1 105 42-155 13-122 (145)
147 3p2o_A Bifunctional protein fo 98.4 6.1E-07 2.1E-11 82.2 8.3 80 37-135 155-235 (285)
148 3l07_A Bifunctional protein fo 98.4 6.5E-07 2.2E-11 81.9 8.2 79 37-134 156-235 (285)
149 3ngx_A Bifunctional protein fo 98.4 5.7E-07 1.9E-11 82.0 7.6 77 40-135 148-225 (276)
150 4a5o_A Bifunctional protein fo 98.4 6.7E-07 2.3E-11 81.9 7.8 80 37-135 156-236 (286)
151 1a4i_A Methylenetetrahydrofola 98.4 1E-06 3.6E-11 81.2 8.9 80 37-135 160-240 (301)
152 2c2x_A Methylenetetrahydrofola 98.4 9.1E-07 3.1E-11 80.8 8.4 80 37-135 153-235 (281)
153 4a26_A Putative C-1-tetrahydro 98.4 6.7E-07 2.3E-11 82.4 7.4 80 37-135 160-242 (300)
154 2wtb_A MFP2, fatty acid multif 98.3 4.3E-07 1.5E-11 92.6 6.1 90 43-133 313-429 (725)
155 3hdj_A Probable ornithine cycl 98.3 5.2E-06 1.8E-10 76.6 12.4 90 41-136 120-217 (313)
156 1x7d_A Ornithine cyclodeaminas 98.3 8.5E-07 2.9E-11 83.1 5.9 113 40-157 127-250 (350)
157 1edz_A 5,10-methylenetetrahydr 98.3 5.4E-07 1.8E-11 83.8 4.5 94 36-135 171-278 (320)
158 3ado_A Lambda-crystallin; L-gu 98.3 2.8E-06 9.5E-11 78.9 9.2 101 41-144 5-133 (319)
159 2g1u_A Hypothetical protein TM 98.3 3.6E-06 1.2E-10 68.7 9.0 97 37-135 14-121 (155)
160 3o8q_A Shikimate 5-dehydrogena 98.3 5.4E-07 1.8E-11 82.1 4.3 114 37-155 121-243 (281)
161 2qyt_A 2-dehydropantoate 2-red 98.2 6E-07 2E-11 80.8 4.0 101 43-147 9-131 (317)
162 2i76_A Hypothetical protein; N 98.2 2.5E-07 8.5E-12 83.0 1.2 86 43-135 3-92 (276)
163 1p77_A Shikimate 5-dehydrogena 98.2 2E-06 7E-11 77.3 5.9 115 37-155 114-237 (272)
164 3hwr_A 2-dehydropantoate 2-red 98.1 4.3E-06 1.5E-10 76.6 7.8 103 39-146 16-133 (318)
165 2z2v_A Hypothetical protein PH 98.1 2.3E-06 7.7E-11 80.5 6.0 110 39-155 13-130 (365)
166 1omo_A Alanine dehydrogenase; 98.1 3.4E-06 1.2E-10 77.9 6.6 89 41-136 124-221 (322)
167 3ghy_A Ketopantoate reductase 98.1 3.3E-06 1.1E-10 77.7 5.7 89 42-134 3-106 (335)
168 1nyt_A Shikimate 5-dehydrogena 98.1 5.3E-06 1.8E-10 74.4 6.8 110 37-152 114-232 (271)
169 1lss_A TRK system potassium up 98.1 1.7E-05 6E-10 62.1 9.0 89 42-132 4-103 (140)
170 3fwz_A Inner membrane protein 98.1 5.4E-06 1.8E-10 66.7 6.0 89 42-132 7-105 (140)
171 3pwz_A Shikimate dehydrogenase 98.1 8.6E-06 3E-10 73.7 7.9 114 37-155 115-237 (272)
172 3uuw_A Putative oxidoreductase 98.0 3.7E-05 1.3E-09 69.4 10.8 109 42-154 6-121 (308)
173 3fbt_A Chorismate mutase and s 98.0 2.5E-05 8.6E-10 71.2 9.2 113 37-155 117-235 (282)
174 1vl6_A Malate oxidoreductase; 98.0 4.7E-05 1.6E-09 72.4 11.2 96 36-136 186-298 (388)
175 3i83_A 2-dehydropantoate 2-red 97.9 1.4E-05 4.6E-10 73.1 7.2 101 43-147 3-119 (320)
176 3jyo_A Quinate/shikimate dehyd 97.9 1.8E-05 6.1E-10 72.0 7.7 114 37-155 122-250 (283)
177 3euw_A MYO-inositol dehydrogen 97.9 4.4E-05 1.5E-09 70.0 10.0 107 43-153 5-119 (344)
178 3llv_A Exopolyphosphatase-rela 97.9 2.9E-05 1E-09 61.8 7.7 90 40-131 4-103 (141)
179 4hkt_A Inositol 2-dehydrogenas 97.9 3.5E-05 1.2E-09 70.3 9.2 107 43-154 4-118 (331)
180 2hmt_A YUAA protein; RCK, KTN, 97.9 2.6E-05 8.8E-10 61.3 7.1 95 39-135 3-107 (144)
181 3db2_A Putative NADPH-dependen 97.9 4.6E-05 1.6E-09 70.3 9.9 106 43-153 6-120 (354)
182 3hn2_A 2-dehydropantoate 2-red 97.9 3.2E-05 1.1E-09 70.3 8.6 101 43-148 3-118 (312)
183 3ic5_A Putative saccharopine d 97.9 1.5E-05 5.2E-10 60.6 5.3 87 41-132 4-100 (118)
184 4b4u_A Bifunctional protein fo 97.9 3E-05 1E-09 71.5 7.9 78 37-133 174-252 (303)
185 3c7a_A Octopine dehydrogenase; 97.9 2.7E-05 9.3E-10 73.0 7.8 87 43-131 3-115 (404)
186 2glx_A 1,5-anhydro-D-fructose 97.8 5.2E-05 1.8E-09 68.9 9.3 108 43-155 1-118 (332)
187 1tlt_A Putative oxidoreductase 97.8 9E-05 3.1E-09 67.2 10.7 108 43-155 6-121 (319)
188 2ho3_A Oxidoreductase, GFO/IDH 97.8 5.3E-05 1.8E-09 68.9 9.1 107 43-154 2-117 (325)
189 1nvt_A Shikimate 5'-dehydrogen 97.8 1.8E-05 6.3E-10 71.4 5.9 114 37-155 123-251 (287)
190 3tnl_A Shikimate dehydrogenase 97.8 2.2E-05 7.5E-10 72.6 6.2 115 37-155 149-284 (315)
191 2d59_A Hypothetical protein PH 97.8 5.9E-05 2E-09 61.7 7.9 103 42-155 22-129 (144)
192 3ezy_A Dehydrogenase; structur 97.8 0.0001 3.6E-09 67.5 10.4 106 43-153 3-118 (344)
193 1iuk_A Hypothetical protein TT 97.8 2.9E-05 1E-09 63.3 5.8 106 41-155 12-122 (140)
194 3e9m_A Oxidoreductase, GFO/IDH 97.8 8.6E-05 2.9E-09 67.9 9.5 108 42-154 5-122 (330)
195 3q2i_A Dehydrogenase; rossmann 97.8 6.5E-05 2.2E-09 69.2 8.4 107 42-153 13-129 (354)
196 3e18_A Oxidoreductase; dehydro 97.7 0.00012 4E-09 67.9 9.9 107 42-153 5-119 (359)
197 3vtf_A UDP-glucose 6-dehydroge 97.7 6.3E-05 2.1E-09 72.7 8.2 104 40-143 19-155 (444)
198 3cea_A MYO-inositol 2-dehydrog 97.7 8.5E-05 2.9E-09 67.8 8.5 107 43-154 9-127 (346)
199 1xea_A Oxidoreductase, GFO/IDH 97.7 7E-05 2.4E-09 68.1 7.8 107 43-155 3-119 (323)
200 3rc1_A Sugar 3-ketoreductase; 97.7 0.00011 3.9E-09 67.8 9.2 109 41-154 26-144 (350)
201 1npy_A Hypothetical shikimate 97.7 5.7E-05 1.9E-09 68.2 6.7 108 41-155 118-234 (271)
202 3evn_A Oxidoreductase, GFO/IDH 97.7 0.00015 5.2E-09 66.1 9.6 107 42-153 5-121 (329)
203 3t4e_A Quinate/shikimate dehyd 97.6 7.2E-05 2.4E-09 69.1 6.9 114 37-155 143-278 (312)
204 1hyh_A L-hicdh, L-2-hydroxyiso 97.6 9.8E-05 3.4E-09 67.2 7.7 65 43-108 2-81 (309)
205 2ewd_A Lactate dehydrogenase,; 97.6 8.8E-05 3E-09 67.8 7.4 103 42-145 4-134 (317)
206 3ego_A Probable 2-dehydropanto 97.6 5.2E-05 1.8E-09 69.0 5.6 96 43-144 3-110 (307)
207 3g17_A Similar to 2-dehydropan 97.6 2E-05 6.8E-10 71.1 2.4 91 43-135 3-99 (294)
208 3c1a_A Putative oxidoreductase 97.6 5.4E-05 1.8E-09 68.7 5.2 107 43-155 11-125 (315)
209 3zwc_A Peroxisomal bifunctiona 97.5 9.5E-05 3.2E-09 75.7 6.8 100 42-144 316-439 (742)
210 2dvm_A Malic enzyme, 439AA lon 97.5 0.00029 1E-08 68.0 9.6 94 37-133 181-297 (439)
211 3ohs_X Trans-1,2-dihydrobenzen 97.5 0.00034 1.2E-08 63.9 9.4 107 43-154 3-121 (334)
212 3e82_A Putative oxidoreductase 97.5 0.00027 9.2E-09 65.6 8.8 106 43-153 8-121 (364)
213 3ec7_A Putative dehydrogenase; 97.5 0.00046 1.6E-08 63.8 10.3 109 40-153 21-141 (357)
214 3mz0_A Inositol 2-dehydrogenas 97.5 0.00041 1.4E-08 63.5 9.9 106 43-153 3-120 (344)
215 2p2s_A Putative oxidoreductase 97.5 0.00049 1.7E-08 62.7 10.1 106 43-153 5-120 (336)
216 1a5z_A L-lactate dehydrogenase 97.5 0.00013 4.5E-09 66.9 6.1 90 43-134 1-118 (319)
217 1id1_A Putative potassium chan 97.5 0.00029 9.9E-09 57.0 7.5 89 41-131 2-104 (153)
218 1ydw_A AX110P-like protein; st 97.5 0.00038 1.3E-08 64.2 9.2 107 43-154 7-126 (362)
219 1h6d_A Precursor form of gluco 97.5 0.00024 8.1E-09 67.8 8.0 108 42-154 83-205 (433)
220 3bio_A Oxidoreductase, GFO/IDH 97.4 0.00036 1.2E-08 63.5 8.4 103 42-151 9-118 (304)
221 2nu8_A Succinyl-COA ligase [AD 97.4 0.00057 1.9E-08 62.1 9.7 109 42-155 7-120 (288)
222 2a9f_A Putative malic enzyme ( 97.4 0.00036 1.2E-08 66.5 8.6 97 35-136 181-293 (398)
223 3l4b_C TRKA K+ channel protien 97.4 0.00032 1.1E-08 60.1 7.4 88 43-132 1-99 (218)
224 1f06_A MESO-diaminopimelate D- 97.4 0.00034 1.1E-08 64.2 7.7 100 43-148 4-108 (320)
225 3fhl_A Putative oxidoreductase 97.4 0.00084 2.9E-08 62.0 10.4 107 42-153 5-119 (362)
226 1pzg_A LDH, lactate dehydrogen 97.4 0.00055 1.9E-08 63.3 9.1 92 42-133 9-133 (331)
227 4fcc_A Glutamate dehydrogenase 97.4 0.00035 1.2E-08 67.6 7.9 116 37-159 230-376 (450)
228 3tum_A Shikimate dehydrogenase 97.4 0.00055 1.9E-08 61.8 8.8 117 37-155 120-246 (269)
229 3f4l_A Putative oxidoreductase 97.4 0.00049 1.7E-08 63.2 8.6 106 43-153 3-119 (345)
230 3dfz_A SIRC, precorrin-2 dehyd 97.4 0.00044 1.5E-08 60.9 7.8 89 38-132 27-121 (223)
231 2axq_A Saccharopine dehydrogen 97.4 0.00022 7.6E-09 69.1 6.3 114 36-155 17-141 (467)
232 3l9w_A Glutathione-regulated p 97.3 0.00019 6.6E-09 68.4 5.7 89 42-132 4-102 (413)
233 3kux_A Putative oxidoreductase 97.3 0.00095 3.2E-08 61.4 10.0 105 43-152 8-120 (352)
234 3m2t_A Probable dehydrogenase; 97.3 0.00066 2.3E-08 62.8 9.0 106 42-152 5-121 (359)
235 3gdo_A Uncharacterized oxidore 97.3 0.0011 3.8E-08 61.2 10.5 106 43-153 6-119 (358)
236 1yqd_A Sinapyl alcohol dehydro 97.3 0.00042 1.4E-08 64.2 7.4 89 41-134 187-284 (366)
237 3i23_A Oxidoreductase, GFO/IDH 97.3 0.0015 5.2E-08 60.0 10.7 106 43-153 3-119 (349)
238 4fgw_A Glycerol-3-phosphate de 97.2 0.00038 1.3E-08 66.2 6.6 90 44-135 36-154 (391)
239 3abi_A Putative uncharacterize 97.2 0.00065 2.2E-08 63.0 8.0 105 41-152 15-127 (365)
240 2v6b_A L-LDH, L-lactate dehydr 97.2 0.00043 1.5E-08 63.1 6.3 109 43-151 1-135 (304)
241 2hjr_A Malate dehydrogenase; m 97.2 0.0008 2.7E-08 62.1 8.2 62 43-105 15-91 (328)
242 3two_A Mannitol dehydrogenase; 97.2 0.00076 2.6E-08 61.7 7.9 90 41-135 176-268 (348)
243 3aog_A Glutamate dehydrogenase 97.2 0.0016 5.5E-08 62.8 10.4 110 37-154 230-360 (440)
244 3e8x_A Putative NAD-dependent 97.2 0.0012 4.2E-08 56.4 8.7 70 38-107 17-95 (236)
245 3q2o_A Phosphoribosylaminoimid 97.2 0.00076 2.6E-08 62.8 7.7 69 35-103 7-82 (389)
246 1j5p_A Aspartate dehydrogenase 97.2 0.0016 5.4E-08 58.5 9.4 89 40-140 10-99 (253)
247 3moi_A Probable dehydrogenase; 97.2 0.0011 3.8E-08 61.8 8.8 106 43-153 3-118 (387)
248 1t2d_A LDH-P, L-lactate dehydr 97.1 0.001 3.4E-08 61.3 8.1 61 43-104 5-80 (322)
249 2yfq_A Padgh, NAD-GDH, NAD-spe 97.1 0.00076 2.6E-08 64.7 7.4 111 36-154 206-342 (421)
250 2tmg_A Protein (glutamate dehy 97.1 0.0038 1.3E-07 59.8 12.2 111 36-154 203-335 (415)
251 1oi7_A Succinyl-COA synthetase 97.1 0.0014 4.8E-08 59.5 8.8 109 42-155 7-120 (288)
252 1guz_A Malate dehydrogenase; o 97.1 0.00095 3.2E-08 60.9 7.6 63 43-106 1-79 (310)
253 4fb5_A Probable oxidoreductase 97.1 0.0011 3.6E-08 60.9 7.7 70 39-108 22-106 (393)
254 4had_A Probable oxidoreductase 97.1 0.00066 2.3E-08 62.0 6.1 105 43-151 24-138 (350)
255 1ldn_A L-lactate dehydrogenase 97.1 0.00049 1.7E-08 63.1 5.2 97 42-140 6-129 (316)
256 2vt3_A REX, redox-sensing tran 97.1 0.00046 1.6E-08 60.4 4.8 65 42-106 85-155 (215)
257 3qy9_A DHPR, dihydrodipicolina 97.1 0.0015 5.3E-08 58.1 8.1 81 43-134 4-85 (243)
258 2cdc_A Glucose dehydrogenase g 97.0 0.00045 1.5E-08 63.8 4.7 91 39-133 178-279 (366)
259 2fp4_A Succinyl-COA ligase [GD 97.0 0.0015 5.2E-08 59.8 8.2 112 39-155 10-128 (305)
260 3k92_A NAD-GDH, NAD-specific g 97.0 0.0011 3.8E-08 63.7 7.5 110 37-154 216-345 (424)
261 2aef_A Calcium-gated potassium 97.0 0.0011 3.9E-08 57.1 7.0 88 41-132 8-106 (234)
262 1jw9_B Molybdopterin biosynthe 97.0 0.00034 1.2E-08 62.1 3.6 38 38-75 27-65 (249)
263 1lc0_A Biliverdin reductase A; 97.0 0.0028 9.6E-08 57.1 9.8 105 43-154 8-120 (294)
264 1lld_A L-lactate dehydrogenase 97.0 0.00086 2.9E-08 60.6 6.4 95 41-135 6-127 (319)
265 1ff9_A Saccharopine reductase; 97.0 0.00093 3.2E-08 64.3 6.9 109 41-155 2-121 (450)
266 3btv_A Galactose/lactose metab 97.0 0.00066 2.3E-08 64.7 5.8 108 42-154 20-150 (438)
267 3lk7_A UDP-N-acetylmuramoylala 97.0 0.0031 1.1E-07 60.3 10.3 114 38-151 5-139 (451)
268 2nvw_A Galactose/lactose metab 97.0 0.0013 4.3E-08 63.8 7.5 104 42-150 39-165 (479)
269 1b7g_O Protein (glyceraldehyde 96.9 0.0025 8.5E-08 59.2 8.6 86 43-133 2-109 (340)
270 3nep_X Malate dehydrogenase; h 96.9 0.0014 4.7E-08 60.4 6.7 96 43-140 1-124 (314)
271 1piw_A Hypothetical zinc-type 96.9 0.0016 5.4E-08 60.0 7.1 89 41-134 179-278 (360)
272 1uuf_A YAHK, zinc-type alcohol 96.9 0.0015 5.1E-08 60.7 6.8 89 41-134 194-290 (369)
273 3r7f_A Aspartate carbamoyltran 96.9 0.0037 1.3E-07 57.5 9.2 98 39-137 144-258 (304)
274 4f2g_A Otcase 1, ornithine car 96.8 0.0041 1.4E-07 57.3 9.3 101 39-139 151-274 (309)
275 2czc_A Glyceraldehyde-3-phosph 96.8 0.0023 7.9E-08 59.0 7.6 65 43-107 3-90 (334)
276 3u3x_A Oxidoreductase; structu 96.8 0.0039 1.3E-07 57.7 9.1 106 41-151 25-140 (361)
277 4ep1_A Otcase, ornithine carba 96.8 0.0078 2.7E-07 56.2 10.9 102 39-140 176-305 (340)
278 4gqa_A NAD binding oxidoreduct 96.8 0.001 3.5E-08 62.4 4.9 106 43-152 27-149 (412)
279 3aoe_E Glutamate dehydrogenase 96.8 0.0049 1.7E-07 59.1 9.5 114 37-158 213-344 (419)
280 1ur5_A Malate dehydrogenase; o 96.8 0.003 1E-07 57.6 7.6 94 43-139 3-124 (309)
281 1cdo_A Alcohol dehydrogenase; 96.8 0.005 1.7E-07 56.8 9.3 89 41-134 192-296 (374)
282 2ixa_A Alpha-N-acetylgalactosa 96.8 0.0056 1.9E-07 58.2 9.9 106 42-152 20-144 (444)
283 4a7p_A UDP-glucose dehydrogena 96.7 0.0038 1.3E-07 60.1 8.5 103 37-144 317-432 (446)
284 3ew7_A LMO0794 protein; Q8Y8U8 96.7 0.0049 1.7E-07 51.4 8.2 94 43-136 1-106 (221)
285 1hdo_A Biliverdin IX beta redu 96.7 0.0068 2.3E-07 49.8 9.0 66 42-107 3-78 (206)
286 3v5n_A Oxidoreductase; structu 96.7 0.0065 2.2E-07 57.4 10.0 108 41-153 36-164 (417)
287 2jhf_A Alcohol dehydrogenase E 96.7 0.005 1.7E-07 56.8 8.9 88 41-133 191-294 (374)
288 3o9z_A Lipopolysaccaride biosy 96.7 0.0036 1.2E-07 56.9 7.8 106 43-153 4-126 (312)
289 1e3i_A Alcohol dehydrogenase, 96.7 0.0056 1.9E-07 56.5 9.2 88 41-133 195-298 (376)
290 2cf5_A Atccad5, CAD, cinnamyl 96.7 0.0024 8.3E-08 58.7 6.7 88 41-133 180-276 (357)
291 3ius_A Uncharacterized conserv 96.7 0.0027 9.1E-08 55.5 6.6 90 42-135 5-105 (286)
292 4h3v_A Oxidoreductase domain p 96.7 0.0011 3.9E-08 60.6 4.4 66 43-108 7-87 (390)
293 1xyg_A Putative N-acetyl-gamma 96.7 0.0048 1.7E-07 57.7 8.7 86 41-133 15-113 (359)
294 1pl8_A Human sorbitol dehydrog 96.7 0.0041 1.4E-07 57.1 8.0 89 41-134 171-275 (356)
295 3orq_A N5-carboxyaminoimidazol 96.7 0.0034 1.2E-07 58.4 7.6 65 38-102 8-79 (377)
296 2d8a_A PH0655, probable L-thre 96.7 0.0013 4.4E-08 60.2 4.6 89 41-134 167-269 (348)
297 2dt5_A AT-rich DNA-binding pro 96.7 0.0012 4.3E-08 57.5 4.3 65 42-107 80-151 (211)
298 1p0f_A NADP-dependent alcohol 96.7 0.0051 1.8E-07 56.7 8.7 88 41-133 191-294 (373)
299 1v9l_A Glutamate dehydrogenase 96.7 0.003 1E-07 60.6 7.2 114 37-158 205-346 (421)
300 3do5_A HOM, homoserine dehydro 96.7 0.0043 1.5E-07 57.4 8.1 110 43-153 3-137 (327)
301 3ip1_A Alcohol dehydrogenase, 96.7 0.0042 1.4E-07 58.2 8.1 94 40-133 212-319 (404)
302 1y6j_A L-lactate dehydrogenase 96.7 0.0026 8.8E-08 58.4 6.5 96 42-140 7-129 (318)
303 2fzw_A Alcohol dehydrogenase c 96.7 0.0046 1.6E-07 57.0 8.2 88 41-133 190-293 (373)
304 1pg5_A Aspartate carbamoyltran 96.7 0.0071 2.4E-07 55.5 9.3 94 39-132 146-260 (299)
305 3oa2_A WBPB; oxidoreductase, s 96.6 0.0042 1.4E-07 56.6 7.7 107 43-153 4-127 (318)
306 3gd5_A Otcase, ornithine carba 96.6 0.013 4.3E-07 54.4 10.9 124 15-140 122-284 (323)
307 3h2s_A Putative NADH-flavin re 96.6 0.0081 2.8E-07 50.4 8.9 92 43-134 1-106 (224)
308 3vku_A L-LDH, L-lactate dehydr 96.6 0.0023 8E-08 59.3 5.9 100 39-140 6-131 (326)
309 2i6u_A Otcase, ornithine carba 96.6 0.015 5.2E-07 53.5 11.3 100 39-138 145-274 (307)
310 1zud_1 Adenylyltransferase THI 96.6 0.003 1E-07 56.0 6.3 36 38-73 24-60 (251)
311 2i6t_A Ubiquitin-conjugating e 96.6 0.0026 9E-08 58.1 6.1 91 42-133 14-126 (303)
312 1iz0_A Quinone oxidoreductase; 96.6 0.0029 1E-07 56.6 6.3 86 41-133 125-219 (302)
313 1zh8_A Oxidoreductase; TM0312, 96.6 0.0023 7.7E-08 58.7 5.6 106 42-152 18-135 (340)
314 1rjw_A ADH-HT, alcohol dehydro 96.6 0.0019 6.6E-08 58.9 5.2 89 41-134 164-263 (339)
315 3s2e_A Zinc-containing alcohol 96.6 0.002 6.8E-08 58.7 5.2 89 40-133 165-264 (340)
316 2nqt_A N-acetyl-gamma-glutamyl 96.6 0.0052 1.8E-07 57.5 8.1 88 42-136 9-114 (352)
317 2ef0_A Ornithine carbamoyltran 96.6 0.01 3.6E-07 54.4 10.0 102 39-140 151-272 (301)
318 3uko_A Alcohol dehydrogenase c 96.6 0.0052 1.8E-07 56.8 8.1 88 41-133 193-296 (378)
319 4gmf_A Yersiniabactin biosynth 96.6 0.002 7E-08 60.5 5.2 65 42-107 7-77 (372)
320 3p7m_A Malate dehydrogenase; p 96.6 0.0054 1.8E-07 56.5 7.9 98 41-140 4-128 (321)
321 2bma_A Glutamate dehydrogenase 96.6 0.0038 1.3E-07 60.6 7.1 115 37-158 247-393 (470)
322 3pqe_A L-LDH, L-lactate dehydr 96.6 0.0046 1.6E-07 57.2 7.4 97 41-139 4-127 (326)
323 1e3j_A NADP(H)-dependent ketos 96.5 0.0057 2E-07 55.9 8.0 89 41-134 168-273 (352)
324 4ew6_A D-galactose-1-dehydroge 96.5 0.0034 1.2E-07 57.5 6.5 104 40-152 23-134 (330)
325 2yv1_A Succinyl-COA ligase [AD 96.5 0.0083 2.9E-07 54.5 8.9 108 43-155 14-126 (294)
326 3qvo_A NMRA family protein; st 96.5 0.0041 1.4E-07 53.3 6.5 95 40-136 21-128 (236)
327 3ff4_A Uncharacterized protein 96.5 0.0023 7.8E-08 51.2 4.5 101 43-155 5-110 (122)
328 1pvv_A Otcase, ornithine carba 96.5 0.022 7.6E-07 52.5 11.6 101 39-139 152-281 (315)
329 3keo_A Redox-sensing transcrip 96.5 0.002 6.9E-08 56.3 4.3 66 42-107 84-159 (212)
330 4ej6_A Putative zinc-binding d 96.5 0.0023 7.9E-08 59.3 5.0 88 41-133 182-285 (370)
331 3eag_A UDP-N-acetylmuramate:L- 96.5 0.011 3.7E-07 54.1 9.4 110 42-151 4-135 (326)
332 1oju_A MDH, malate dehydrogena 96.5 0.006 2.1E-07 55.6 7.6 95 43-140 1-124 (294)
333 2hcy_A Alcohol dehydrogenase 1 96.5 0.0058 2E-07 55.8 7.5 89 41-134 169-271 (347)
334 1pqw_A Polyketide synthase; ro 96.5 0.0027 9.4E-08 53.0 4.9 88 41-134 38-139 (198)
335 3gvi_A Malate dehydrogenase; N 96.5 0.009 3.1E-07 55.2 8.7 93 40-133 5-125 (324)
336 3fef_A Putative glucosidase LP 96.5 0.0026 8.8E-08 61.5 5.2 116 41-157 4-172 (450)
337 3oqb_A Oxidoreductase; structu 96.4 0.007 2.4E-07 56.0 7.9 105 43-152 7-136 (383)
338 4ina_A Saccharopine dehydrogen 96.4 0.0014 4.8E-08 62.0 3.1 107 43-154 2-137 (405)
339 1lu9_A Methylene tetrahydromet 96.4 0.011 3.7E-07 52.8 8.8 70 37-106 114-198 (287)
340 3tl2_A Malate dehydrogenase; c 96.4 0.0045 1.6E-07 56.9 6.3 98 41-140 7-133 (315)
341 3r3j_A Glutamate dehydrogenase 96.4 0.0044 1.5E-07 60.0 6.3 111 37-154 234-375 (456)
342 3tpf_A Otcase, ornithine carba 96.4 0.019 6.6E-07 52.8 10.4 102 39-140 142-273 (307)
343 3fpc_A NADP-dependent alcohol 96.4 0.0031 1.1E-07 57.7 5.0 88 41-133 166-267 (352)
344 3uog_A Alcohol dehydrogenase; 96.4 0.0044 1.5E-07 57.1 6.0 87 41-133 189-288 (363)
345 4eye_A Probable oxidoreductase 96.3 0.0041 1.4E-07 56.8 5.7 88 40-133 158-258 (342)
346 3d0o_A L-LDH 1, L-lactate dehy 96.3 0.0094 3.2E-07 54.5 8.0 97 41-139 5-128 (317)
347 1vlv_A Otcase, ornithine carba 96.3 0.02 7E-07 53.0 10.3 100 39-138 164-294 (325)
348 2ozp_A N-acetyl-gamma-glutamyl 96.3 0.019 6.4E-07 53.3 10.1 85 43-133 5-100 (345)
349 1f8f_A Benzyl alcohol dehydrog 96.3 0.0031 1.1E-07 58.1 4.7 88 41-133 190-290 (371)
350 1ez4_A Lactate dehydrogenase; 96.3 0.0048 1.6E-07 56.7 5.8 95 43-139 6-126 (318)
351 3dty_A Oxidoreductase, GFO/IDH 96.3 0.0038 1.3E-07 58.4 5.2 109 41-153 11-139 (398)
352 2yv2_A Succinyl-COA synthetase 96.3 0.019 6.6E-07 52.2 9.7 109 42-155 13-127 (297)
353 1pjq_A CYSG, siroheme synthase 96.3 0.0058 2E-07 58.8 6.5 70 38-108 8-83 (457)
354 2h6e_A ADH-4, D-arabinose 1-de 96.2 0.0035 1.2E-07 57.2 4.5 88 41-133 170-270 (344)
355 1dxh_A Ornithine carbamoyltran 96.2 0.015 5E-07 54.2 8.6 97 37-133 150-275 (335)
356 3mw9_A GDH 1, glutamate dehydr 96.2 0.011 3.9E-07 57.7 8.2 107 39-154 241-368 (501)
357 1cf2_P Protein (glyceraldehyde 96.2 0.014 4.7E-07 54.1 8.4 65 43-107 2-89 (337)
358 1nvm_B Acetaldehyde dehydrogen 96.2 0.0077 2.6E-07 55.2 6.6 86 43-131 5-103 (312)
359 3gms_A Putative NADPH:quinone 96.2 0.0087 3E-07 54.5 6.9 88 40-133 143-244 (340)
360 3r6d_A NAD-dependent epimerase 96.2 0.0037 1.2E-07 52.8 4.0 90 43-136 6-111 (221)
361 3ldh_A Lactate dehydrogenase; 96.2 0.0018 6.2E-08 60.2 2.2 96 41-139 20-143 (330)
362 2rir_A Dipicolinate synthase, 96.2 0.013 4.5E-07 52.8 7.9 112 40-158 5-127 (300)
363 3dhn_A NAD-dependent epimerase 96.2 0.01 3.5E-07 49.9 6.8 65 43-107 5-78 (227)
364 4dup_A Quinone oxidoreductase; 96.2 0.0051 1.7E-07 56.5 5.2 87 41-133 167-266 (353)
365 4a8t_A Putrescine carbamoyltra 96.1 0.022 7.5E-07 53.1 9.5 102 37-139 170-302 (339)
366 1mld_A Malate dehydrogenase; o 96.1 0.019 6.6E-07 52.4 9.1 97 43-141 1-124 (314)
367 2b5w_A Glucose dehydrogenase; 96.1 0.0087 3E-07 54.9 6.7 88 41-134 172-275 (357)
368 1bgv_A Glutamate dehydrogenase 96.1 0.018 6.2E-07 55.6 9.2 111 37-154 225-367 (449)
369 2zqz_A L-LDH, L-lactate dehydr 96.1 0.0058 2E-07 56.3 5.5 97 41-139 8-130 (326)
370 1ys4_A Aspartate-semialdehyde 96.1 0.0092 3.1E-07 55.4 6.8 86 43-133 9-115 (354)
371 4b7c_A Probable oxidoreductase 96.1 0.0045 1.5E-07 56.1 4.6 90 40-135 148-251 (336)
372 1vkn_A N-acetyl-gamma-glutamyl 96.1 0.021 7.2E-07 53.4 9.2 87 41-134 12-109 (351)
373 1ml4_A Aspartate transcarbamoy 96.1 0.0083 2.8E-07 55.2 6.3 94 39-132 152-268 (308)
374 4amu_A Ornithine carbamoyltran 96.1 0.025 8.7E-07 53.2 9.7 94 39-132 177-300 (365)
375 3tqh_A Quinone oxidoreductase; 96.1 0.0043 1.5E-07 56.0 4.2 87 40-133 151-246 (321)
376 3gg2_A Sugar dehydrogenase, UD 96.1 0.013 4.5E-07 56.2 7.8 95 37-135 313-421 (450)
377 1duv_G Octase-1, ornithine tra 96.1 0.013 4.5E-07 54.5 7.5 97 37-133 150-275 (333)
378 3upl_A Oxidoreductase; rossman 96.0 0.0097 3.3E-07 57.5 6.8 107 43-154 24-162 (446)
379 2dq4_A L-threonine 3-dehydroge 96.0 0.0045 1.5E-07 56.4 4.1 87 41-133 164-263 (343)
380 2d4a_B Malate dehydrogenase; a 96.0 0.0088 3E-07 54.6 6.0 94 44-140 1-122 (308)
381 3mtj_A Homoserine dehydrogenas 96.0 0.012 4.1E-07 56.8 7.1 108 42-153 10-132 (444)
382 1v3u_A Leukotriene B4 12- hydr 96.0 0.011 3.6E-07 53.5 6.5 88 40-133 144-245 (333)
383 1vj0_A Alcohol dehydrogenase, 96.0 0.0092 3.1E-07 55.4 6.1 88 41-133 195-299 (380)
384 3csu_A Protein (aspartate carb 96.0 0.016 5.3E-07 53.5 7.5 105 39-144 151-279 (310)
385 3qwb_A Probable quinone oxidor 96.0 0.0068 2.3E-07 54.9 5.1 88 40-133 147-248 (334)
386 4a0s_A Octenoyl-COA reductase/ 96.0 0.017 5.7E-07 54.6 8.0 88 40-133 219-337 (447)
387 3c8m_A Homoserine dehydrogenas 96.0 0.013 4.6E-07 54.0 7.1 109 43-152 7-142 (331)
388 1kyq_A Met8P, siroheme biosynt 95.9 0.0055 1.9E-07 55.5 4.3 38 38-75 9-46 (274)
389 4a8p_A Putrescine carbamoyltra 95.9 0.027 9.2E-07 52.9 9.0 102 37-139 148-280 (355)
390 3sds_A Ornithine carbamoyltran 95.9 0.034 1.2E-06 52.1 9.7 95 38-132 184-308 (353)
391 2x5o_A UDP-N-acetylmuramoylala 95.9 0.034 1.2E-06 52.7 9.9 113 39-152 2-132 (439)
392 3oig_A Enoyl-[acyl-carrier-pro 95.9 0.032 1.1E-06 48.4 9.0 98 38-135 3-150 (266)
393 2c0c_A Zinc binding alcohol de 95.9 0.0074 2.5E-07 55.6 5.0 88 41-134 163-263 (362)
394 2yyy_A Glyceraldehyde-3-phosph 95.9 0.028 9.7E-07 52.2 8.9 86 43-132 3-113 (343)
395 3dqp_A Oxidoreductase YLBE; al 95.9 0.026 8.8E-07 47.4 7.9 66 43-108 1-75 (219)
396 4a2c_A Galactitol-1-phosphate 95.9 0.02 6.7E-07 51.9 7.7 89 40-133 159-261 (346)
397 2vn8_A Reticulon-4-interacting 95.8 0.028 9.4E-07 51.9 8.8 91 40-135 182-283 (375)
398 3fbg_A Putative arginate lyase 95.8 0.0079 2.7E-07 54.9 5.0 88 41-133 150-249 (346)
399 3jyn_A Quinone oxidoreductase; 95.8 0.0072 2.5E-07 54.7 4.6 87 41-133 140-240 (325)
400 2ejw_A HDH, homoserine dehydro 95.8 0.0054 1.8E-07 56.9 3.7 63 43-107 4-77 (332)
401 3ijr_A Oxidoreductase, short c 95.8 0.054 1.8E-06 48.2 10.2 98 38-135 43-185 (291)
402 4id9_A Short-chain dehydrogena 95.8 0.012 4.1E-07 52.8 5.8 70 38-107 15-88 (347)
403 3k31_A Enoyl-(acyl-carrier-pro 95.8 0.035 1.2E-06 49.5 8.9 98 38-135 26-171 (296)
404 3gqv_A Enoyl reductase; medium 95.8 0.032 1.1E-06 51.4 8.9 87 40-132 163-263 (371)
405 1oth_A Protein (ornithine tran 95.7 0.041 1.4E-06 50.9 9.3 94 39-132 152-271 (321)
406 4aj2_A L-lactate dehydrogenase 95.7 0.012 4.2E-07 54.5 5.9 98 39-139 16-141 (331)
407 3goh_A Alcohol dehydrogenase, 95.7 0.0058 2E-07 54.9 3.6 86 41-133 142-230 (315)
408 2xxj_A L-LDH, L-lactate dehydr 95.7 0.017 5.7E-07 52.8 6.6 95 43-139 1-121 (310)
409 3d6n_B Aspartate carbamoyltran 95.7 0.027 9.3E-07 51.4 8.0 90 39-132 143-251 (291)
410 1xgk_A Nitrogen metabolite rep 95.7 0.014 4.9E-07 53.5 6.2 95 41-135 4-115 (352)
411 3ing_A Homoserine dehydrogenas 95.7 0.027 9.2E-07 52.0 7.9 109 43-152 5-138 (325)
412 1smk_A Malate dehydrogenase, g 95.7 0.022 7.5E-07 52.3 7.4 96 42-139 8-130 (326)
413 3g79_A NDP-N-acetyl-D-galactos 95.7 0.02 6.9E-07 55.6 7.4 100 37-144 348-460 (478)
414 1lnq_A MTHK channels, potassiu 95.7 0.014 5E-07 52.9 6.0 85 42-129 115-208 (336)
415 3gpi_A NAD-dependent epimerase 95.6 0.012 4.1E-07 51.5 5.2 96 41-136 2-112 (286)
416 4e4t_A Phosphoribosylaminoimid 95.6 0.018 6E-07 54.6 6.7 65 38-102 31-102 (419)
417 3e48_A Putative nucleoside-dip 95.6 0.02 6.8E-07 50.0 6.6 65 43-107 1-76 (289)
418 2j3h_A NADP-dependent oxidored 95.6 0.0085 2.9E-07 54.4 4.3 87 41-133 155-256 (345)
419 3ip3_A Oxidoreductase, putativ 95.6 0.015 5.1E-07 52.9 6.0 105 43-152 3-120 (337)
420 3dr3_A N-acetyl-gamma-glutamyl 95.6 0.014 4.7E-07 54.3 5.7 87 43-134 5-108 (337)
421 2q3e_A UDP-glucose 6-dehydroge 95.6 0.034 1.2E-06 53.3 8.7 94 39-135 326-445 (467)
422 2w37_A Ornithine carbamoyltran 95.6 0.042 1.4E-06 51.6 9.0 95 39-133 173-296 (359)
423 1kol_A Formaldehyde dehydrogen 95.6 0.012 4.1E-07 54.7 5.2 92 41-133 185-301 (398)
424 2z1m_A GDP-D-mannose dehydrata 95.6 0.021 7E-07 50.8 6.5 67 40-106 1-85 (345)
425 3rui_A Ubiquitin-like modifier 95.6 0.017 5.8E-07 53.9 6.1 36 38-73 30-66 (340)
426 3pi7_A NADH oxidoreductase; gr 95.6 0.022 7.7E-07 51.9 6.8 85 43-133 166-264 (349)
427 3grf_A Ornithine carbamoyltran 95.5 0.058 2E-06 50.0 9.6 101 39-139 158-293 (328)
428 2jl1_A Triphenylmethane reduct 95.5 0.019 6.5E-07 49.9 6.0 64 43-106 1-76 (287)
429 2pzm_A Putative nucleotide sug 95.5 0.029 9.8E-07 50.2 7.3 71 37-107 15-99 (330)
430 2dph_A Formaldehyde dismutase; 95.5 0.01 3.5E-07 55.3 4.4 93 41-134 185-301 (398)
431 1obb_A Maltase, alpha-glucosid 95.5 0.027 9.3E-07 54.8 7.5 65 42-106 3-87 (480)
432 2eih_A Alcohol dehydrogenase; 95.5 0.016 5.6E-07 52.7 5.6 87 41-133 166-266 (343)
433 4f3y_A DHPR, dihydrodipicolina 95.4 0.031 1.1E-06 50.4 7.2 64 42-105 7-82 (272)
434 3jv7_A ADH-A; dehydrogenase, n 95.4 0.013 4.6E-07 53.2 4.9 89 40-133 170-271 (345)
435 1qor_A Quinone oxidoreductase; 95.4 0.014 4.8E-07 52.6 4.9 87 41-133 140-240 (327)
436 3fi9_A Malate dehydrogenase; s 95.4 0.01 3.5E-07 55.3 4.0 66 40-105 6-85 (343)
437 3oh8_A Nucleoside-diphosphate 95.4 0.037 1.3E-06 53.4 8.1 64 42-106 147-211 (516)
438 3h5n_A MCCB protein; ubiquitin 95.4 0.018 6.2E-07 53.6 5.6 38 38-75 114-152 (353)
439 2bka_A CC3, TAT-interacting pr 95.4 0.026 9E-07 47.8 6.3 68 40-107 16-95 (242)
440 2y0c_A BCEC, UDP-glucose dehyd 95.4 0.05 1.7E-06 52.6 8.9 102 37-143 323-448 (478)
441 3cps_A Glyceraldehyde 3-phosph 95.4 0.038 1.3E-06 51.7 7.8 86 43-133 18-139 (354)
442 3slg_A PBGP3 protein; structur 95.4 0.062 2.1E-06 48.6 9.1 68 39-106 21-101 (372)
443 3m2p_A UDP-N-acetylglucosamine 95.3 0.057 2E-06 47.7 8.6 66 42-107 2-73 (311)
444 4dvj_A Putative zinc-dependent 95.3 0.018 6.2E-07 53.1 5.5 93 41-138 171-276 (363)
445 1o6z_A MDH, malate dehydrogena 95.3 0.022 7.5E-07 51.7 5.9 95 43-139 1-124 (303)
446 1ebf_A Homoserine dehydrogenas 95.3 0.02 6.9E-07 53.5 5.7 65 43-107 5-95 (358)
447 2we8_A Xanthine dehydrogenase; 95.3 0.033 1.1E-06 52.7 7.2 103 42-162 204-309 (386)
448 1u8x_X Maltose-6'-phosphate gl 95.3 0.017 5.9E-07 56.0 5.3 66 41-106 27-112 (472)
449 3m6i_A L-arabinitol 4-dehydrog 95.3 0.042 1.4E-06 50.2 7.7 89 41-134 179-285 (363)
450 2gas_A Isoflavone reductase; N 95.3 0.037 1.3E-06 48.5 7.1 74 42-115 2-97 (307)
451 3ijp_A DHPR, dihydrodipicolina 95.2 0.055 1.9E-06 49.2 8.3 63 43-105 22-97 (288)
452 1gu7_A Enoyl-[acyl-carrier-pro 95.2 0.069 2.4E-06 48.7 9.0 87 41-133 166-276 (364)
453 3ojo_A CAP5O; rossmann fold, c 95.2 0.057 1.9E-06 51.8 8.7 87 39-135 312-409 (431)
454 1zsy_A Mitochondrial 2-enoyl t 95.2 0.076 2.6E-06 48.5 9.3 86 41-132 167-270 (357)
455 2zb4_A Prostaglandin reductase 95.2 0.024 8.2E-07 51.8 5.9 87 41-133 158-261 (357)
456 2pd4_A Enoyl-[acyl-carrier-pro 95.2 0.042 1.4E-06 48.1 7.3 38 39-76 3-43 (275)
457 1u8f_O GAPDH, glyceraldehyde-3 95.2 0.028 9.6E-07 52.0 6.3 86 43-133 4-123 (335)
458 2r6j_A Eugenol synthase 1; phe 95.2 0.075 2.6E-06 47.1 8.9 74 42-115 11-100 (318)
459 2zcu_A Uncharacterized oxidore 95.2 0.018 6.1E-07 50.0 4.7 89 44-135 1-106 (286)
460 3vh1_A Ubiquitin-like modifier 95.2 0.018 6.2E-07 57.4 5.2 35 38-72 323-357 (598)
461 3pxx_A Carveol dehydrogenase; 95.1 0.1 3.6E-06 45.5 9.6 37 38-74 6-43 (287)
462 2wyu_A Enoyl-[acyl carrier pro 95.1 0.021 7.3E-07 49.7 5.0 38 38-75 4-44 (261)
463 1b8p_A Protein (malate dehydro 95.1 0.052 1.8E-06 49.7 7.8 96 42-139 5-138 (329)
464 1wly_A CAAR, 2-haloacrylate re 95.1 0.021 7.2E-07 51.6 5.0 87 41-133 145-245 (333)
465 3e5r_O PP38, glyceraldehyde-3- 95.1 0.035 1.2E-06 51.6 6.5 31 43-73 4-35 (337)
466 3orf_A Dihydropteridine reduct 95.0 0.031 1E-06 48.5 5.8 97 39-135 19-147 (251)
467 4fgs_A Probable dehydrogenase 95.0 0.035 1.2E-06 49.9 6.3 98 37-134 24-161 (273)
468 1xq6_A Unknown protein; struct 95.0 0.044 1.5E-06 46.2 6.6 67 40-106 2-79 (253)
469 4g65_A TRK system potassium up 95.0 0.03 1E-06 53.9 6.0 65 42-106 3-78 (461)
470 1y1p_A ARII, aldehyde reductas 95.0 0.08 2.7E-06 46.8 8.5 69 39-107 8-94 (342)
471 2j8z_A Quinone oxidoreductase; 95.0 0.023 7.7E-07 52.1 4.9 87 41-133 162-262 (354)
472 3nkl_A UDP-D-quinovosamine 4-d 95.0 0.033 1.1E-06 43.8 5.3 67 41-107 3-76 (141)
473 4hv4_A UDP-N-acetylmuramate--L 94.9 0.045 1.5E-06 52.9 7.2 111 41-151 21-149 (494)
474 4gsl_A Ubiquitin-like modifier 94.9 0.036 1.2E-06 55.5 6.6 35 39-73 323-358 (615)
475 3grk_A Enoyl-(acyl-carrier-pro 94.9 0.065 2.2E-06 47.7 7.7 98 38-135 27-172 (293)
476 2p91_A Enoyl-[acyl-carrier-pro 94.9 0.09 3.1E-06 46.2 8.6 37 39-75 18-57 (285)
477 4ekn_B Aspartate carbamoyltran 94.9 0.099 3.4E-06 48.0 9.0 95 39-135 148-267 (306)
478 3nx4_A Putative oxidoreductase 94.9 0.018 6.3E-07 51.7 4.0 86 42-134 148-243 (324)
479 3hsk_A Aspartate-semialdehyde 94.9 0.051 1.7E-06 51.3 7.2 91 38-133 15-125 (381)
480 1yb5_A Quinone oxidoreductase; 94.9 0.031 1.1E-06 51.2 5.6 88 41-134 170-271 (351)
481 2o3j_A UDP-glucose 6-dehydroge 94.9 0.075 2.6E-06 51.2 8.6 103 38-144 331-457 (481)
482 2x0j_A Malate dehydrogenase; o 94.9 0.042 1.4E-06 50.1 6.3 98 43-142 1-126 (294)
483 3i6i_A Putative leucoanthocyan 94.9 0.052 1.8E-06 48.9 6.9 76 40-115 8-104 (346)
484 1jvb_A NAD(H)-dependent alcoho 94.9 0.014 4.8E-07 53.2 3.2 89 41-134 170-273 (347)
485 3gem_A Short chain dehydrogena 94.8 0.049 1.7E-06 47.7 6.6 41 37-77 22-63 (260)
486 4gx0_A TRKA domain protein; me 94.8 0.054 1.8E-06 52.8 7.5 87 42-130 348-440 (565)
487 3hn7_A UDP-N-acetylmuramate-L- 94.8 0.081 2.8E-06 51.5 8.7 112 40-151 17-149 (524)
488 1tt7_A YHFP; alcohol dehydroge 94.8 0.031 1.1E-06 50.4 5.3 84 44-133 153-248 (330)
489 1dih_A Dihydrodipicolinate red 94.8 0.009 3.1E-07 53.8 1.7 63 42-104 5-80 (273)
490 3v2g_A 3-oxoacyl-[acyl-carrier 94.8 0.13 4.4E-06 45.2 9.2 97 37-133 26-166 (271)
491 2dtx_A Glucose 1-dehydrogenase 94.8 0.086 2.9E-06 46.1 8.0 68 39-106 5-84 (264)
492 3gaz_A Alcohol dehydrogenase s 94.8 0.036 1.2E-06 50.5 5.6 95 41-142 150-256 (343)
493 1xa0_A Putative NADPH dependen 94.7 0.031 1.1E-06 50.3 5.2 84 44-133 152-247 (328)
494 1qyc_A Phenylcoumaran benzylic 94.7 0.056 1.9E-06 47.4 6.7 74 42-115 4-98 (308)
495 2ph5_A Homospermidine synthase 94.7 0.15 5.1E-06 49.6 10.2 97 43-158 14-115 (480)
496 3r3s_A Oxidoreductase; structu 94.7 0.13 4.4E-06 45.7 9.2 98 38-135 45-188 (294)
497 2wm3_A NMRA-like family domain 94.7 0.074 2.5E-06 46.7 7.4 64 42-105 5-81 (299)
498 1p9l_A Dihydrodipicolinate red 94.7 0.16 5.6E-06 44.9 9.7 50 43-104 1-53 (245)
499 3on5_A BH1974 protein; structu 94.7 0.045 1.5E-06 51.4 6.3 99 42-162 199-299 (362)
500 3h8v_A Ubiquitin-like modifier 94.7 0.037 1.3E-06 50.4 5.5 38 38-75 32-70 (292)
No 1
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=9.5e-49 Score=368.98 Aligned_cols=205 Identities=28% Similarity=0.489 Sum_probs=185.0
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|+.|.+..+.|.+|+||||||||+|+||+++|++|++|||++++|+++...... ..++.
T Consensus 138 l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~~g~~ 216 (345)
T 4g2n_A 138 LVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHAL-EEGAI 216 (345)
T ss_dssp HHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHH-HTTCE
T ss_pred HHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhh-hcCCe
Confidence 567777777 445567899998876556789999999999999999999999999999976666654433332 23777
Q ss_pred cc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 87 HT-NIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 87 ~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
++ +++|++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++||++
T Consensus 217 ~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~--------------------- 275 (345)
T 4g2n_A 217 YHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIE--------------------- 275 (345)
T ss_dssp ECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHH---------------------
T ss_pred EeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHH---------------------
Confidence 76 99999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcH
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQI 245 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~ 245 (274)
||++|+|+||+||||++|| |.++|||++|||++|||+|++|.
T Consensus 276 -------------------------------------aL~~g~i~gA~LDVf~~EP-~~~~pL~~~~nvilTPHia~~t~ 317 (345)
T 4g2n_A 276 -------------------------------------ALRSKHLFAAGLDVFANEP-AIDPRYRSLDNIFLTPHIGSATH 317 (345)
T ss_dssp -------------------------------------HHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECCSCTTCBH
T ss_pred -------------------------------------HHHhCCceEEEecCCCCCC-CCCchHHhCCCEEEcCccCcCCH
Confidence 9999999999999999999 88999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 246 ETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 246 ~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
+++.+|+..+++||.+|+.|+++.|.|+
T Consensus 318 e~~~~~~~~~~~ni~~~l~g~~~~~~V~ 345 (345)
T 4g2n_A 318 ETRDAMGWLLIQGIEALNQSDVPDNLIS 345 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 9999999999999999999999999885
No 2
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=1.4e-49 Score=372.94 Aligned_cols=204 Identities=27% Similarity=0.390 Sum_probs=180.7
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|.+.|.+ ......+|.|..|. ...|.+|+|++|||||+|.||+.+|+++++|||++++|++. .+......++.
T Consensus 108 l~L~~~r~~~~~~~~~~~~~~~~~~--~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~-~~~~~~~~~~~ 184 (334)
T 3kb6_A 108 MILTLVKRLKRIEDRVKKLNFSQDS--EILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVV-KREDLKEKGCV 184 (334)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCCCG--GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS-CCHHHHHTTCE
T ss_pred HHHHHhhcccccccccccccccccc--ccccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCc-cchhhhhcCce
Confidence 567777776 33455678886543 35689999999999999999999999999999977776644 44445556777
Q ss_pred ccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccce
Q psy3240 87 HTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRV 166 (274)
Q Consensus 87 ~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~ 166 (274)
+.+++|++++||+|++|+|+|++|+++|+++.|++||+|++|||+|||++||++||++
T Consensus 185 ~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~---------------------- 242 (334)
T 3kb6_A 185 YTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYR---------------------- 242 (334)
T ss_dssp ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHH----------------------
T ss_pred ecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHH----------------------
Confidence 8899999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCC---------------ccccC
Q psy3240 167 FTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDS---------------PLLQL 231 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~---------------~l~~~ 231 (274)
||++|+|+||+||||++||+|.++ |||.+
T Consensus 243 ------------------------------------aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~ 286 (334)
T 3kb6_A 243 ------------------------------------AYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACK 286 (334)
T ss_dssp ------------------------------------HHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTS
T ss_pred ------------------------------------HHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccC
Confidence 999999999999999999998776 68899
Q ss_pred CcEEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 232 DNCVILPHIGSAQIETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 232 ~nvi~tPH~~~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
|||++|||+|++|.+++++++..+++||.+|++|++....+|
T Consensus 287 ~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~~~n 328 (334)
T 3kb6_A 287 DNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGN 328 (334)
T ss_dssp TTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGG
T ss_pred CCEEECCchhhChHHHHHHHHHHHHHHHHHHHcCCCCcCCCC
Confidence 999999999999999999999999999999999998765554
No 3
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=7.5e-48 Score=360.62 Aligned_cols=206 Identities=31% Similarity=0.540 Sum_probs=187.2
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCC
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGA 85 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~ 85 (274)
++|++.|.+ .....++|.|..|.+ ...|.+|+|+||||||+|+||+++|++|++||+++++|+++..... +...|+
T Consensus 111 ~~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 189 (330)
T 4e5n_A 111 LAVGLGRHLRAADAFVRSGKFRGWQP-RFYGTGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGL 189 (330)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCSCCS-CCCCCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTE
T ss_pred HHHHHHhChHHHHHHHHhCCccccCc-cccCCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCc
Confidence 567777777 445667899988876 3568999999999999999999999999999997777665543443 555677
Q ss_pred cccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 86 EHTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 86 ~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++||++
T Consensus 190 ~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~--------------------- 248 (330)
T 4e5n_A 190 RQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLA--------------------- 248 (330)
T ss_dssp EECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHH---------------------
T ss_pred eeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHH---------------------
Confidence 77799999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCC-------CCCCCCccccCCcEEEcc
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPE-------PLPLDSPLLQLDNCVILP 238 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~e-------p~~~~~~l~~~~nvi~tP 238 (274)
||++|+|.||+||||++| |+|.++|||++|||++||
T Consensus 249 -------------------------------------aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTP 291 (330)
T 4e5n_A 249 -------------------------------------ALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTP 291 (330)
T ss_dssp -------------------------------------HHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECS
T ss_pred -------------------------------------HHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECC
Confidence 999999999999999999 999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 239 HIGSAQIETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 239 H~~~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
|+|++|.+++.++...+++||.+|++|+++.|.||
T Consensus 292 Hia~~t~e~~~~~~~~~~~ni~~~~~g~~~~~~vn 326 (330)
T 4e5n_A 292 HIGSAVRAVRLEIERCAAQNILQALAGERPINAVN 326 (330)
T ss_dssp SCTTCCHHHHHHHHHHHHHHHHHHHTTSCCTTBSS
T ss_pred cCCCChHHHHHHHHHHHHHHHHHHHcCCCCCCccC
Confidence 99999999999999999999999999999999987
No 4
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=5.9e-47 Score=359.11 Aligned_cols=204 Identities=23% Similarity=0.357 Sum_probs=178.6
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCC-CCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcC
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPN-FMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRG 84 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~-~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g 84 (274)
++|++.|.+ .....+.|+|. |... ...|.+|+|+||||||+|.||+++|+++++|||++++|+++ .... +...|
T Consensus 141 l~L~~~R~~~~~~~~~r~g~~~-w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~-~~~~~~~~~g 218 (365)
T 4hy3_A 141 FALALARGIVDADIAFQEGTEL-WGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPW-LPRSMLEENG 218 (365)
T ss_dssp HHHHHHHTTTHHHHHHHHTCCC-CSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSS-SCHHHHHHTT
T ss_pred HHHHHHhchhHHHHHHHcCCcc-ccccccccccccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCC-CCHHHHhhcC
Confidence 567777877 33344567753 3221 24679999999999999999999999999999977766655 4443 55678
Q ss_pred CcccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhccccccc
Q psy3240 85 AEHTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLH 164 (274)
Q Consensus 85 ~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~ 164 (274)
+...+++|++++||+|++|+|++++|+++++++.|+.||+|++|||+|||++||++||++
T Consensus 219 ~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~-------------------- 278 (365)
T 4hy3_A 219 VEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMA-------------------- 278 (365)
T ss_dssp CEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHH--------------------
T ss_pred eeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHH--------------------
Confidence 887899999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCc
Q psy3240 165 RVFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQ 244 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t 244 (274)
||++|+|+ |+||||++||+|.++|||.+|||++|||+|++|
T Consensus 279 --------------------------------------aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t 319 (365)
T 4hy3_A 279 --------------------------------------AVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGAL 319 (365)
T ss_dssp --------------------------------------HHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSCC
T ss_pred --------------------------------------HHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccCH
Confidence 99999999 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 245 IETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 245 ~~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
.+++.+|+..+++||.+|+.|+|+.+.|+
T Consensus 320 ~e~~~~~~~~~~~ni~~~~~G~~~~~~vn 348 (365)
T 4hy3_A 320 DSAFKKMGDMVLEDMDLMDRGLPPMRCKR 348 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 99999999999999999999999998876
No 5
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=3.6e-47 Score=358.99 Aligned_cols=205 Identities=28% Similarity=0.457 Sum_probs=183.1
Q ss_pred HHHHHHhhh--ccchhccCCCCc-------cCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKS-------WAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE 79 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~-------~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~ 79 (274)
++|++.|.+ .....++|.|+. |.+....|++|+|+||||||+|.||+++|+++++||+++++|+++ .+..
T Consensus 118 l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~-~~~~ 196 (352)
T 3gg9_A 118 LVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRE-NSKE 196 (352)
T ss_dssp HHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSH-HHHH
T ss_pred HHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCC-CCHH
Confidence 467777877 444556799975 333445689999999999999999999999999999977777654 3333
Q ss_pred -HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhh
Q psy3240 80 -ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMV 157 (274)
Q Consensus 80 -a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~ 157 (274)
+...|+..+ +++|++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++||++
T Consensus 197 ~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~------------- 263 (352)
T 3gg9_A 197 RARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVT------------- 263 (352)
T ss_dssp HHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHH-------------
T ss_pred HHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHH-------------
Confidence 556788777 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccceeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEc
Q psy3240 158 TNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVIL 237 (274)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~t 237 (274)
||++|+|+||+||||++||+|.++|||++|||++|
T Consensus 264 ---------------------------------------------aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilT 298 (352)
T 3gg9_A 264 ---------------------------------------------ALNRGRPGMAAIDVFETEPILQGHTLLRMENCICT 298 (352)
T ss_dssp ---------------------------------------------HHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEEC
T ss_pred ---------------------------------------------HHHhCCccEEEecccCCCCCCCCChhhcCCCEEEC
Confidence 99999999999999999999999999999999999
Q ss_pred cCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 238 PHIGSAQIETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 238 PH~~~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
||+|+.|.++++++...+++||.+|+.|+|+ |.||
T Consensus 299 PHia~~t~e~~~~~~~~~~~ni~~~~~G~p~-~~Vn 333 (352)
T 3gg9_A 299 PHIGYVERESYEMYFGIAFQNILDILQGNVD-SVAN 333 (352)
T ss_dssp CSCTTCBHHHHHHHHHHHHHHHHHHHTTCCT-TBSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC-cccC
Confidence 9999999999999999999999999999875 7765
No 6
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=7.2e-47 Score=352.10 Aligned_cols=200 Identities=24% Similarity=0.350 Sum_probs=174.2
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCC
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGA 85 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~ 85 (274)
++|++.|.+ .....++|.|+.. .+++|+|+||||||+|.||+++|++|++|||++++|+++..... .... .
T Consensus 109 ~~L~~~R~~~~~~~~~~~g~W~~~-----~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~-~ 182 (315)
T 3pp8_A 109 QVLHWFRRFDDYQALKNQALWKPL-----PEYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESY-V 182 (315)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCCC-----CCCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEE-E
T ss_pred HHHHHHhCChHHHHHHHhcccCCC-----CCCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhh-c
Confidence 345666666 3344567999753 35899999999999999999999999999998888876544322 1110 1
Q ss_pred cccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 86 EHTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 86 ~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
...+++|++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++||++
T Consensus 183 ~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~--------------------- 241 (315)
T 3pp8_A 183 GREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLA--------------------- 241 (315)
T ss_dssp SHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHH---------------------
T ss_pred ccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHH---------------------
Confidence 12479999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcH
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQI 245 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~ 245 (274)
||++|+|+||+||||++||+|.++|||++|||++|||+|++|.
T Consensus 242 -------------------------------------aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~ 284 (315)
T 3pp8_A 242 -------------------------------------ALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVTR 284 (315)
T ss_dssp -------------------------------------HHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCCC
T ss_pred -------------------------------------HHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCcccH
Confidence 9999999999999999999999999999999999999999997
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q psy3240 246 ETRQEMARITAQNIINTFHNKPMIYEVPL 274 (274)
Q Consensus 246 ~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 274 (274)
+ .++...+++||.+|++|+++.|.|+.
T Consensus 285 ~--~~~~~~~~~ni~~~~~G~~~~~~V~~ 311 (315)
T 3pp8_A 285 P--AEAIDYISRTITQLEKGEPVTGQVDR 311 (315)
T ss_dssp H--HHHHHHHHHHHHHHHHTCCCCCBCCC
T ss_pred H--HHHHHHHHHHHHHHHcCCCCCceECc
Confidence 5 57999999999999999999999974
No 7
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=8.4e-47 Score=352.93 Aligned_cols=204 Identities=27% Similarity=0.375 Sum_probs=177.5
Q ss_pred HHHHHHhhhc---cchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCC
Q psy3240 9 IYIDVIKYVS---TPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGA 85 (274)
Q Consensus 9 ~~l~~~r~~~---~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~ 85 (274)
++|++.|.+. ....++|.|+... .+++|+|+||||||+|.||+++|++|++|||++++|+++...........
T Consensus 105 ~~L~~~R~~~~~~~~~~~~~~W~~~~----~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~ 180 (324)
T 3evt_A 105 AMLSVVRGYHAAWLNQRGARQWALPM----TTSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETV 180 (324)
T ss_dssp HHHHHHTTHHHHHHHHTTTCCSSCSS----CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSEEE
T ss_pred HHHHHHhChhHHHHHHHhcCCcccCC----CCccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhhcc
Confidence 4566677662 4455678997532 47899999999999999999999999999998777776544322111122
Q ss_pred cccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 86 EHTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 86 ~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++||++
T Consensus 181 ~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~--------------------- 239 (324)
T 3evt_A 181 AFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMT--------------------- 239 (324)
T ss_dssp EGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHH---------------------
T ss_pred ccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHH---------------------
Confidence 34589999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcH
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQI 245 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~ 245 (274)
||++|+|+||+||||++||+|.++|||++|||++|||+|+.|.
T Consensus 240 -------------------------------------aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~ 282 (324)
T 3evt_A 240 -------------------------------------ALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIA 282 (324)
T ss_dssp -------------------------------------HHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCC
T ss_pred -------------------------------------HHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChH
Confidence 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCCcccC
Q psy3240 246 ETRQEMARITAQNIINTFHN-KPMIYEVPL 274 (274)
Q Consensus 246 ~~~~~~~~~~~~ni~~~~~g-~~~~~~v~~ 274 (274)
+++.+++..+++|+.+|++| +++.|.|+.
T Consensus 283 ~~~~~~~~~~~~nl~~~l~~~~~~~n~V~~ 312 (324)
T 3evt_A 283 HFRATVFPIFAANFAQFVKDGTLVRNQVDL 312 (324)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCCCSCBCC-
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCceECc
Confidence 99999999999999999965 578898873
No 8
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=6.3e-47 Score=353.85 Aligned_cols=201 Identities=26% Similarity=0.405 Sum_probs=175.2
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|... .+.+|+|+||||||+|.||+++|++|++|||++++|+++............
T Consensus 110 ~~L~~~R~~~~~~~~~~~g~W~~~-----~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~ 184 (324)
T 3hg7_A 110 HLLSLMRQLPLYREQQKQRLWQSH-----PYQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQ 184 (324)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCCC-----CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCSEEEC
T ss_pred HHHHHHhChHHHHHHHhhCCCcCC-----CCcccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhhcccc
Confidence 566777776 4445567899752 357999999999999999999999999999977777654432221111223
Q ss_pred ccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccce
Q psy3240 87 HTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRV 166 (274)
Q Consensus 87 ~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~ 166 (274)
..+++|++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++||++
T Consensus 185 ~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~---------------------- 242 (324)
T 3hg7_A 185 LPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLT---------------------- 242 (324)
T ss_dssp GGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHH----------------------
T ss_pred cCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHH----------------------
Confidence 4589999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcHH
Q psy3240 167 FTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQIE 246 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~~ 246 (274)
||++|+|+||+||||++||+|.++|||++|||++|||+|++|.+
T Consensus 243 ------------------------------------aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~ 286 (324)
T 3hg7_A 243 ------------------------------------ALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP 286 (324)
T ss_dssp ------------------------------------HHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH
T ss_pred ------------------------------------HHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH
Confidence 99999999999999999999999999999999999999999975
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcccC
Q psy3240 247 TRQEMARITAQNIINTFHNKPMIYEVPL 274 (274)
Q Consensus 247 ~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 274 (274)
.++...+++|+.+|++|+++.|.|+.
T Consensus 287 --~~~~~~~~~nl~~~~~G~~~~~~V~~ 312 (324)
T 3hg7_A 287 --DDVAQIFVRNYIRFIDGQPLDGKIDF 312 (324)
T ss_dssp --HHHHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred --HHHHHHHHHHHHHHHcCCCCcceECh
Confidence 57999999999999999999999974
No 9
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=1.8e-46 Score=354.17 Aligned_cols=205 Identities=24% Similarity=0.441 Sum_probs=180.1
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCC
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGA 85 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~ 85 (274)
++|++.|.+ .....++|+|..... ...+.+|+|++|||||+|+||+++|++|++|||++++|+++..... +...|+
T Consensus 130 l~L~~~R~~~~~~~~~~~g~W~~~~~-~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~ 208 (351)
T 3jtm_A 130 RILILMRNFVPGYNQVVKGEWNVAGI-AYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGA 208 (351)
T ss_dssp HHHHHHHTHHHHHHHHHTTCCCHHHH-HTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCC
T ss_pred HHHHHhhCcHHHHHHHHcCCCccccc-cCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCC
Confidence 567777776 445567799974211 1246799999999999999999999999999997666665443443 556688
Q ss_pred ccc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhccccccc
Q psy3240 86 EHT-NIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLH 164 (274)
Q Consensus 86 ~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~ 164 (274)
... ++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++||++
T Consensus 209 ~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~-------------------- 268 (351)
T 3jtm_A 209 KFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVD-------------------- 268 (351)
T ss_dssp EECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHH--------------------
T ss_pred eEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHH--------------------
Confidence 776 89999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCc
Q psy3240 165 RVFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQ 244 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t 244 (274)
||++|+|+||+||||++||+|.++|||.+|||++|||+|+.|
T Consensus 269 --------------------------------------aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t 310 (351)
T 3jtm_A 269 --------------------------------------AVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTT 310 (351)
T ss_dssp --------------------------------------HHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGS
T ss_pred --------------------------------------HHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCC
Confidence 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCC--CCCcc
Q psy3240 245 IETRQEMARITAQNIINTFHNKP--MIYEV 272 (274)
Q Consensus 245 ~~~~~~~~~~~~~ni~~~~~g~~--~~~~v 272 (274)
.+++.+++..+++|+.+|++|++ +.|.|
T Consensus 311 ~ea~~~~~~~~~~nl~~~~~g~~~~~~~~i 340 (351)
T 3jtm_A 311 IDAQLRYAAGTKDMLERYFKGEDFPTENYI 340 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCGGGEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCceEE
Confidence 99999999999999999999996 44443
No 10
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=3.2e-46 Score=351.55 Aligned_cols=204 Identities=27% Similarity=0.382 Sum_probs=177.2
Q ss_pred HHHHHHhhh--ccchhc-cCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCC
Q psy3240 9 IYIDVIKYV--STPVSC-RGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGA 85 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~-~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~ 85 (274)
++|++.|.+ .....+ +|+|. |.. ...|++|+|+||||||+|.||+++|+++++|||++++|+++.. .. ...++
T Consensus 114 l~L~~~R~~~~~~~~~~~~g~~~-w~~-~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~-~~~~~ 189 (343)
T 2yq5_A 114 QAMYLLRKIGEFRYRMDHDHDFT-WPS-NLISNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYN-PE-FEPFL 189 (343)
T ss_dssp HHHHHHHTHHHHHHHHHHHCCCC-CCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC-GG-GTTTC
T ss_pred HHHHHHhchHHHHHHHHHcCCcc-ccc-CCCccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChh-hh-hhccc
Confidence 567777777 233333 67773 432 2468999999999999999999999999999997777765543 22 23345
Q ss_pred cccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 86 EHTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 86 ~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
.+.++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++||++
T Consensus 190 ~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~--------------------- 248 (343)
T 2yq5_A 190 TYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIK--------------------- 248 (343)
T ss_dssp EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHH---------------------
T ss_pred cccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHH---------------------
Confidence 66799999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCC--CCCC-----------CccccCC
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEP--LPLD-----------SPLLQLD 232 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep--~~~~-----------~~l~~~~ 232 (274)
||++|+|+||+||||++|| +|.+ +|||++|
T Consensus 249 -------------------------------------aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~ 291 (343)
T 2yq5_A 249 -------------------------------------ALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMP 291 (343)
T ss_dssp -------------------------------------HHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCT
T ss_pred -------------------------------------HHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCC
Confidence 9999999999999999999 5665 5899999
Q ss_pred cEEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q psy3240 233 NCVILPHIGSAQIETRQEMARITAQNIINTFHNKPMIYEVPL 274 (274)
Q Consensus 233 nvi~tPH~~~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 274 (274)
||++|||+|++|.+++++|...+++|+.+|+.|+++.|+|+.
T Consensus 292 nvilTPHia~~t~ea~~~~~~~~~~ni~~~l~g~~~~~~v~~ 333 (343)
T 2yq5_A 292 NVVITPHSAFYTETSIRNMVQICLTDQLTIAKGGRPRSIVNL 333 (343)
T ss_dssp TEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCTTBC--
T ss_pred CEEECCccccchHHHHHHHHHHHHHHHHHHHcCCCCCceECC
Confidence 999999999999999999999999999999999999999873
No 11
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=1.1e-46 Score=353.35 Aligned_cols=205 Identities=26% Similarity=0.382 Sum_probs=182.7
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|.. .. ...|.+|+|+||||||+|.||+++|++|++|||++++|+++. .....+.++.
T Consensus 108 l~L~~~R~~~~~~~~~~~g~w~~-~~-~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~g~~ 184 (334)
T 2pi1_A 108 MILTLVKRLKRIEDRVKKLNFSQ-DS-EILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVK-REDLKEKGCV 184 (334)
T ss_dssp HHHHHHTTHHHHHHHHTTTCCCC-CG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CHHHHHTTCE
T ss_pred HHHHHHHhHHHHHHHHHcCCCcc-cc-CccceeccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCc-chhhHhcCce
Confidence 566777777 444556799963 21 235789999999999999999999999999999777666544 3333356777
Q ss_pred ccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccce
Q psy3240 87 HTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRV 166 (274)
Q Consensus 87 ~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~ 166 (274)
..+++|++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++||++
T Consensus 185 ~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~---------------------- 242 (334)
T 2pi1_A 185 YTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYR---------------------- 242 (334)
T ss_dssp ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHH----------------------
T ss_pred ecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHH----------------------
Confidence 7899999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCC---------------CCCCccccC
Q psy3240 167 FTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPL---------------PLDSPLLQL 231 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~---------------~~~~~l~~~ 231 (274)
||++|+|.||+||||++||+ |.++|||++
T Consensus 243 ------------------------------------aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~ 286 (334)
T 2pi1_A 243 ------------------------------------AYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACK 286 (334)
T ss_dssp ------------------------------------HHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTS
T ss_pred ------------------------------------HHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcC
Confidence 99999999999999999998 678999999
Q ss_pred CcEEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q psy3240 232 DNCVILPHIGSAQIETRQEMARITAQNIINTFHNKPMIYEVPL 274 (274)
Q Consensus 232 ~nvi~tPH~~~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 274 (274)
|||++|||+|++|.++.+++...+++||.+|+.|+++.|.|++
T Consensus 287 ~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~~~~~Vn~ 329 (334)
T 2pi1_A 287 DNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGNF 329 (334)
T ss_dssp TTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGGE
T ss_pred CCEEECCccccChHHHHHHHHHHHHHHHHHHHcCCCCCceECc
Confidence 9999999999999999999999999999999999999999974
No 12
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-45 Score=347.48 Aligned_cols=201 Identities=27% Similarity=0.468 Sum_probs=151.4
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|+.+. ....|.+|+||||||||+|+||+++|+++++||+++++|+++ ... ..+..
T Consensus 137 l~L~~~R~~~~~~~~~~~g~W~~~~-~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~-~~~---~~~~~ 211 (340)
T 4dgs_A 137 LMLAVLRRVGDGDRLVREGRWAAGE-QLPLGHSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRS-TLS---GVDWI 211 (340)
T ss_dssp HHHHHHTTHHHHHHHHHTTCC-------CCCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSS-CCT---TSCCE
T ss_pred HHHHHHhChHHHHHHHhcCCccccc-CcCccccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC-ccc---ccCce
Confidence 677888887 45566789997641 123578999999999999999999999999999976655544 332 12333
Q ss_pred c-cCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 87 H-TNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 87 ~-~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
. .+++|++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++||++
T Consensus 212 ~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~--------------------- 270 (340)
T 4dgs_A 212 AHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIE--------------------- 270 (340)
T ss_dssp ECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC-------------------------------
T ss_pred ecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHH---------------------
Confidence 3 489999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcH
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQI 245 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~ 245 (274)
||++|+|+||+||||++||+|. +|||++|||++|||+|++|.
T Consensus 271 -------------------------------------aL~~g~i~gA~LDVf~~EP~~~-~~L~~~~nvilTPHia~~t~ 312 (340)
T 4dgs_A 271 -------------------------------------ALKSGTIAGAGLDVFVNEPAIR-SEFHTTPNTVLMPHQGSATV 312 (340)
T ss_dssp -----------------------------------------CCSSEEEESCCSSSSSCC-SHHHHSSSEEECSSCSSCCH
T ss_pred -------------------------------------HHHcCCceEEEeCCcCCCCCCc-cchhhCCCEEEcCcCCcCCH
Confidence 9999999999999999999986 49999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 246 ETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 246 ~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
+++.+++..+++|+.+|+.|+++.+.||
T Consensus 313 e~~~~~~~~~~~nl~~~~~g~~~~~~Vn 340 (340)
T 4dgs_A 313 ETRMAMGKLVLANLAAHFAGEKAPNTVN 340 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCTTBC-
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 9999999999999999999999999986
No 13
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=6.3e-45 Score=350.19 Aligned_cols=202 Identities=28% Similarity=0.441 Sum_probs=173.6
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|.+.|.+ .....++|+|.++. ..|.+|+||||||||+|.||+.+|+++++|||++++|++..... ..++.
T Consensus 124 l~L~l~R~i~~~~~~~~~g~W~~~~---~~~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~---~~~~~ 197 (416)
T 3k5p_A 124 EIIMLMRRIFPRSVSAHAGGWEKTA---IGSREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ---YGNVK 197 (416)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCCCC---TTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC---BTTBE
T ss_pred HHHHHhcccHHHHHhhhcccccccC---CCCccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc---ccCcE
Confidence 456677776 44456779997643 24689999999999999999999999999999877776543322 11233
Q ss_pred c-cCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 87 H-TNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 87 ~-~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
. .+++|++++||+|++|+|++++|+++++++.|++||+|++|||+|||+++|++||++
T Consensus 198 ~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~--------------------- 256 (416)
T 3k5p_A 198 PAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAK--------------------- 256 (416)
T ss_dssp ECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHH---------------------
T ss_pred ecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHH---------------------
Confidence 3 489999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCC----CccccCCcEEEccCCC
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLD----SPLLQLDNCVILPHIG 241 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~----~~l~~~~nvi~tPH~~ 241 (274)
||++|+|+||+||||++||++.+ +|||.+|||++|||+|
T Consensus 257 -------------------------------------aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig 299 (416)
T 3k5p_A 257 -------------------------------------VLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIG 299 (416)
T ss_dssp -------------------------------------HHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCT
T ss_pred -------------------------------------HHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCC
Confidence 99999999999999999999875 7999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q psy3240 242 SAQIETRQEMARITAQNIINTFHNKPMIYEVPL 274 (274)
Q Consensus 242 ~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 274 (274)
++|.|++++++.++++|+.+|+.|++..+.||+
T Consensus 300 ~~T~ea~~~~~~~~~~nl~~~l~~g~~~~~Vn~ 332 (416)
T 3k5p_A 300 GSTEEAQERIGTEVTRKLVEYSDVGSTVGAVNF 332 (416)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHCCCTTBSSS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhCCCCceeeC
Confidence 999999999999999999999999999999885
No 14
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=1.5e-44 Score=338.28 Aligned_cols=203 Identities=26% Similarity=0.374 Sum_probs=178.2
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|. |. ...|.+|.|++|||||+|.||+.+|++++++|+++++|+++.. ....+ .+.
T Consensus 114 l~L~~~R~~~~~~~~~~~g~w~-~~--~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~-~~~~~-~~~ 188 (333)
T 1j4a_A 114 QAARILRQDKAMDEKVARHDLR-WA--PTIGREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRN-PELEK-KGY 188 (333)
T ss_dssp HHHHHHHTHHHHHHHHHTTBCC-CT--TCCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHH-TTC
T ss_pred HHHHHHcCHHHHHHHHHcCCCc-cC--CcccccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-hhHHh-hCe
Confidence 567777777 34455678895 43 2457899999999999999999999999999997766665443 32322 355
Q ss_pred cc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 87 HT-NIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 87 ~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
.. ++++++++||+|++|+|++++|+++++++.|+.||+|+++||+|||+++|+++|++
T Consensus 189 ~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~--------------------- 247 (333)
T 1j4a_A 189 YVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIR--------------------- 247 (333)
T ss_dssp BCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHH---------------------
T ss_pred ecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHH---------------------
Confidence 56 89999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCC--CCCCC-----------ccccCC
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEP--LPLDS-----------PLLQLD 232 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep--~~~~~-----------~l~~~~ 232 (274)
||++|+|+||+||||++|| +|.++ |||++|
T Consensus 248 -------------------------------------aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~ 290 (333)
T 1j4a_A 248 -------------------------------------GLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARP 290 (333)
T ss_dssp -------------------------------------HHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCT
T ss_pred -------------------------------------HHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCC
Confidence 9999999999999999999 56654 699999
Q ss_pred cEEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q psy3240 233 NCVILPHIGSAQIETRQEMARITAQNIINTFHNKPMIYEVPL 274 (274)
Q Consensus 233 nvi~tPH~~~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 274 (274)
||++|||+|++|.+++.++...+++|+.+|+.|+++.|.|++
T Consensus 291 nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~~ 332 (333)
T 1j4a_A 291 NVLVTPKTAFYTTHAVRNMVVKAFDNNLELVEGKEAETPVKV 332 (333)
T ss_dssp TEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCSSBCCC
T ss_pred CEEECCccccCHHHHHHHHHHHHHHHHHHHHcCCCCCccccC
Confidence 999999999999999999999999999999999999999985
No 15
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=1.1e-44 Score=346.65 Aligned_cols=206 Identities=26% Similarity=0.447 Sum_probs=181.5
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCC
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGA 85 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~ 85 (274)
++|++.|.+ .....++|.|+... ....+.+|+|++|||||+|.||+.+|+++++|||++++|+++..... +...|+
T Consensus 157 liL~~~R~~~~~~~~~~~g~W~~~~-~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~ 235 (393)
T 2nac_A 157 MILSLVRNYLPSHEWARKGGWNIAD-CVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNL 235 (393)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCHHH-HHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTC
T ss_pred HHHHHHhccHHHHHHHHcCCCCccc-cccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCc
Confidence 567777766 34455679996421 11246799999999999999999999999999997776665544433 555677
Q ss_pred cc-cCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhccccccc
Q psy3240 86 EH-TNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLH 164 (274)
Q Consensus 86 ~~-~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~ 164 (274)
.. .++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|++
T Consensus 236 ~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~-------------------- 295 (393)
T 2nac_A 236 TWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVAR-------------------- 295 (393)
T ss_dssp EECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHH--------------------
T ss_pred eecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHH--------------------
Confidence 66 489999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCc
Q psy3240 165 RVFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQ 244 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t 244 (274)
+|++|+|.||+||||++||+|.++|||++|||++|||+|+.|
T Consensus 296 --------------------------------------aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T 337 (393)
T 2nac_A 296 --------------------------------------ALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTT 337 (393)
T ss_dssp --------------------------------------HHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCS
T ss_pred --------------------------------------HHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCc
Confidence 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 245 IETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 245 ~~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
.+++.+++..+++||.+|+.|+++.|.|.
T Consensus 338 ~e~~~~~~~~~~~nl~~~~~G~~~~~~~~ 366 (393)
T 2nac_A 338 LTAQARYAAGTREILECFFEGRPIRDEYL 366 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCGGGE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcceeE
Confidence 99999999999999999999999998764
No 16
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=1.5e-44 Score=346.69 Aligned_cols=202 Identities=28% Similarity=0.446 Sum_probs=169.7
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|+|+++. ..|.+|+|||+||||+|+||+.+|+++++|||++++|++..... ..++.
T Consensus 113 ~~L~~~R~i~~~~~~~~~g~W~~~~---~~~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~ 186 (404)
T 1sc6_A 113 ELLLLLRGVPEANAKAHRGVGNKLA---AGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP---LGNAT 186 (404)
T ss_dssp HHHHHHHTHHHHHHHHHHTCCC--------CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC---CTTCE
T ss_pred HHHHHHhChHHHHHHHHcCCccccC---CCccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc---cCCce
Confidence 567777777 44556679997543 34789999999999999999999999999999877776543321 11344
Q ss_pred cc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 87 HT-NIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 87 ~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
.. +++|++++||+|++|+|++++|+++++++.|++||+|++|||+|||+++|++||++
T Consensus 187 ~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~--------------------- 245 (404)
T 1sc6_A 187 QVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALAD--------------------- 245 (404)
T ss_dssp ECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHH---------------------
T ss_pred ecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHH---------------------
Confidence 44 89999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCC----CCccccCCcEEEccCCC
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPL----DSPLLQLDNCVILPHIG 241 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~----~~~l~~~~nvi~tPH~~ 241 (274)
+|++|+++||+||||++||+|. ++|||.+|||++|||+|
T Consensus 246 -------------------------------------aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~ 288 (404)
T 1sc6_A 246 -------------------------------------ALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIG 288 (404)
T ss_dssp -------------------------------------HHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCS
T ss_pred -------------------------------------HHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCC
Confidence 9999999999999999999875 57999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q psy3240 242 SAQIETRQEMARITAQNIINTFHNKPMIYEVPL 274 (274)
Q Consensus 242 ~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 274 (274)
++|.|++++++.++++|+.+|+.|+++.+.||+
T Consensus 289 ~~T~ea~~~~~~~~~~nl~~~l~g~~~~~~vn~ 321 (404)
T 1sc6_A 289 GSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNF 321 (404)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHCCCTTBSSS
T ss_pred CCcHHHHHHHHHHHHHHHHHHHcCCCCcceecc
Confidence 999999999999999999999999999999885
No 17
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=1.3e-44 Score=342.77 Aligned_cols=205 Identities=26% Similarity=0.470 Sum_probs=178.9
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCe-EEEEeCCCCChh-HhhcC
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVS-KFLYTSRSKKPE-ADKRG 84 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~-vv~~~~r~~~~~-a~~~g 84 (274)
++|++.|.+ .....++|.|+.... ...+.+|+|++|||||+|+||+.+|++|++||++ +++|+++..... +.+.|
T Consensus 130 ~~L~~~R~~~~~~~~~~~g~W~~~~~-~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g 208 (364)
T 2j6i_A 130 TMLVLVRNFVPAHEQIINHDWEVAAI-AKDAYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVG 208 (364)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCHHHH-HTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTT
T ss_pred HHHHHHhChHHHHHHHHhCCCCcCcc-cCCcccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcC
Confidence 567777776 445566799963110 1246899999999999999999999999999997 777765544444 55667
Q ss_pred Cccc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccc
Q psy3240 85 AEHT-NIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHL 163 (274)
Q Consensus 85 ~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~ 163 (274)
+... ++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|++
T Consensus 209 ~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~------------------- 269 (364)
T 2j6i_A 209 ARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAA------------------- 269 (364)
T ss_dssp EEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHH-------------------
T ss_pred cEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHH-------------------
Confidence 6655 89999999999999999999999999999999999999999999999999999999
Q ss_pred cceeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccC--C---cEEEcc
Q psy3240 164 HRVFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQL--D---NCVILP 238 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~--~---nvi~tP 238 (274)
+|++|+|+||+||||++||+|.++|||.+ | ||++||
T Consensus 270 ---------------------------------------aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTP 310 (364)
T 2j6i_A 270 ---------------------------------------ALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTP 310 (364)
T ss_dssp ---------------------------------------HHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECC
T ss_pred ---------------------------------------HHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECC
Confidence 99999999999999999999999999999 9 999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHcCC---CCCCcc
Q psy3240 239 HIGSAQIETRQEMARITAQNIINTFHNK---PMIYEV 272 (274)
Q Consensus 239 H~~~~t~~~~~~~~~~~~~ni~~~~~g~---~~~~~v 272 (274)
|+|++|.+++.+++..+++|+.+|+.|+ ++.|.|
T Consensus 311 Hia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~~n~v 347 (364)
T 2j6i_A 311 HYSGTTLDAQTRYAQGTVNILESFFTGKFDYRPQDII 347 (364)
T ss_dssp SCGGGSHHHHHHHHHHHHHHHHHHHTTCCCCCGGGEE
T ss_pred ccCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCcee
Confidence 9999999999999999999999999999 445544
No 18
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=4e-44 Score=335.11 Aligned_cols=203 Identities=28% Similarity=0.405 Sum_probs=176.1
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|. |.. ...|.+|.|++|||||+|.||+.+|+++++||+++++|+++.... .. ..+.
T Consensus 113 l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~-~~~~ 188 (331)
T 1xdw_A 113 QAMMLLRHTAYTTSRTAKKNFK-VDA-FMFSKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG-IE-DYCT 188 (331)
T ss_dssp HHHHHHTTHHHHHHHHTTTCCC-CCS-TTCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS-CT-TTCE
T ss_pred HHHHHHhCHHHHHHHHHcCCCc-ccc-CcCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH-HH-hccc
Confidence 456677776 34455678885 422 245789999999999999999999999999999877776554332 21 2244
Q ss_pred ccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccce
Q psy3240 87 HTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRV 166 (274)
Q Consensus 87 ~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~ 166 (274)
..++++++++||+|++|+|++++|+++++++.|+.||+|+++||+|||+++|+++|++
T Consensus 189 ~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~---------------------- 246 (331)
T 1xdw_A 189 QVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIE---------------------- 246 (331)
T ss_dssp ECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHH----------------------
T ss_pred cCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHH----------------------
Confidence 5689999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCC--CCC-----------CccccC-C
Q psy3240 167 FTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPL--PLD-----------SPLLQL-D 232 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~--~~~-----------~~l~~~-~ 232 (274)
+|++|+|+||+||||++||+ |.+ +|||++ |
T Consensus 247 ------------------------------------aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~ 290 (331)
T 1xdw_A 247 ------------------------------------AVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYP 290 (331)
T ss_dssp ------------------------------------HHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTT
T ss_pred ------------------------------------HHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCC
Confidence 99999999999999999994 333 379999 9
Q ss_pred cEEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 233 NCVILPHIGSAQIETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 233 nvi~tPH~~~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
||++|||+|++|.+++.++...+++|+.+|+.|+++.|.||
T Consensus 291 nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 331 (331)
T 1xdw_A 291 RVLITPHLGSYTDEAVKNMVEVSYQNLKDLAETGDCPNKIK 331 (331)
T ss_dssp TEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHSCCTTBCC
T ss_pred CEEEcCccccChHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999999999999999999999886
No 19
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=332.91 Aligned_cols=200 Identities=26% Similarity=0.471 Sum_probs=172.6
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|+.. ...|.+|.|++|||||+|.||+++|+++++||+++++|+++.....+...|+.
T Consensus 133 l~L~~~R~~~~~~~~~~~g~W~~~---~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~ 209 (335)
T 2g76_A 133 MIMCLARQIPQATASMKDGKWERK---KFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQ 209 (335)
T ss_dssp HHHHHHHTHHHHHHHHHTTCCCTG---GGCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCE
T ss_pred HHHHHHhchHHHHHHHHcCCCCcc---CCCCcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCce
Confidence 467777777 4445567999642 23578999999999999999999999999999987777655443225567777
Q ss_pred ccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccce
Q psy3240 87 HTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRV 166 (274)
Q Consensus 87 ~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~ 166 (274)
..++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|++
T Consensus 210 ~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~---------------------- 267 (335)
T 2g76_A 210 QLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLR---------------------- 267 (335)
T ss_dssp ECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHH----------------------
T ss_pred eCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHH----------------------
Confidence 7799999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcHH
Q psy3240 167 FTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQIE 246 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~~ 246 (274)
+|++|+|+||+||||+.|| +.++|||++|||++|||++++|.+
T Consensus 268 ------------------------------------aL~~g~i~gA~lDV~~~EP-~~~~~L~~~~nvilTPH~~~~t~e 310 (335)
T 2g76_A 268 ------------------------------------ALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCPHLGASTKE 310 (335)
T ss_dssp ------------------------------------HHHHTSEEEEEESCCSSSS-CSCCHHHHSTTEEECSSCTTCBHH
T ss_pred ------------------------------------HHHhCCccEEEEeecCCCC-CCCchHHhCCCEEECCcCCCCCHH
Confidence 9999999999999999999 578999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCC
Q psy3240 247 TRQEMARITAQNIINTFHNKPMIY 270 (274)
Q Consensus 247 ~~~~~~~~~~~ni~~~~~g~~~~~ 270 (274)
++.+++..+++|+.+|+.|+++.|
T Consensus 311 ~~~~~~~~~~~nl~~~~~g~~~~n 334 (335)
T 2g76_A 311 AQSRCGEEIAVQFVDMVKGKSLTG 334 (335)
T ss_dssp HHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999999875
No 20
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=4.9e-43 Score=325.38 Aligned_cols=200 Identities=40% Similarity=0.679 Sum_probs=179.0
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|+.|.+..+.|.++.|++|||||+|.||+.+|++++++|+++++|+++.... . +.
T Consensus 109 ~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~----~~ 183 (311)
T 2cuk_A 109 LLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPL-P----YP 183 (311)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS-S----SC
T ss_pred HHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCccc-c----cc
Confidence 567777777 4455677999766544456789999999999999999999999999999776666544332 1 34
Q ss_pred ccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccce
Q psy3240 87 HTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRV 166 (274)
Q Consensus 87 ~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~ 166 (274)
..++++++++||+|++|+|.+++|+++++++.++.||+|+++||+|||+++|+++|.+
T Consensus 184 ~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~---------------------- 241 (311)
T 2cuk_A 184 FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVE---------------------- 241 (311)
T ss_dssp BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHH----------------------
T ss_pred cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHH----------------------
Confidence 5589999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcHH
Q psy3240 167 FTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQIE 246 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~~ 246 (274)
+|+ |+|.||+||||++||++.++|||++|||++|||++++|.+
T Consensus 242 ------------------------------------aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~ 284 (311)
T 2cuk_A 242 ------------------------------------ALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRT 284 (311)
T ss_dssp ------------------------------------HHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHH
T ss_pred ------------------------------------HHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHH
Confidence 999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcc
Q psy3240 247 TRQEMARITAQNIINTFHNKPMIYEV 272 (274)
Q Consensus 247 ~~~~~~~~~~~ni~~~~~g~~~~~~v 272 (274)
++.++...+++|+.+|+.|+++.|.|
T Consensus 285 ~~~~~~~~~~~nl~~~~~g~~~~~~v 310 (311)
T 2cuk_A 285 TRERMAEVAVENLLAVLEGREPPNPV 310 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSSBC
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcc
Confidence 99999999999999999999998876
No 21
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.5e-44 Score=335.13 Aligned_cols=204 Identities=27% Similarity=0.392 Sum_probs=176.9
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|. |.. ...|.+|.|++|||||+|.||+.+|+++++||+++++|+++.... .. ..+.
T Consensus 112 l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~-~~~~ 187 (333)
T 1dxy_A 112 DTLYLLRNMGKVQAQLQAGDYE-KAG-TFIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG-DH-PDFD 187 (333)
T ss_dssp HHHHHHTTHHHHHHHHHTTCHH-HHT-CCCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS-CC-TTCE
T ss_pred HHHHHhhhHHHHHHHHHcCCcc-ccc-CCCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh-hH-hccc
Confidence 567777777 44455678884 411 235789999999999999999999999999999877776554432 21 2244
Q ss_pred ccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccce
Q psy3240 87 HTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRV 166 (274)
Q Consensus 87 ~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~ 166 (274)
..++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|++
T Consensus 188 ~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~---------------------- 245 (333)
T 1dxy_A 188 YVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLS---------------------- 245 (333)
T ss_dssp ECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHH----------------------
T ss_pred cCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHH----------------------
Confidence 5689999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCC--CC--------C---CccccCCc
Q psy3240 167 FTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPL--PL--------D---SPLLQLDN 233 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~--~~--------~---~~l~~~~n 233 (274)
+|++|+|+||+||||++||+ |. + +|||++||
T Consensus 246 ------------------------------------aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~n 289 (333)
T 1dxy_A 246 ------------------------------------NLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPN 289 (333)
T ss_dssp ------------------------------------HHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTT
T ss_pred ------------------------------------HHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCC
Confidence 99999999999999999993 21 1 58999999
Q ss_pred EEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q psy3240 234 CVILPHIGSAQIETRQEMARITAQNIINTFHNKPMIYEVPL 274 (274)
Q Consensus 234 vi~tPH~~~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 274 (274)
|++|||+|++|.+++.+++..+++|+.+|+.|+++.|.|++
T Consensus 290 vi~TPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~v~~ 330 (333)
T 1dxy_A 290 VVLSPHIAYYTETAVHNMVYFSLQHLVDFLTKGETSTEVTG 330 (333)
T ss_dssp EEECSSCTTCSHHHHHHHHHHHHHHHHHHHHHSCCTTEECC
T ss_pred EEECCccccChHHHHHHHHHHHHHHHHHHHcCCCCCceeCC
Confidence 99999999999999999999999999999999999999874
No 22
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=8.1e-43 Score=324.93 Aligned_cols=202 Identities=28% Similarity=0.528 Sum_probs=179.7
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeC-CCCChhHhhcCC
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTS-RSKKPEADKRGA 85 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~-r~~~~~a~~~g~ 85 (274)
++|++.|.+ .....++|.|+.|.+....|.+|.|++|||||+|.||+++|++++++|+++++|++ +.....+.+.|+
T Consensus 111 l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 190 (320)
T 1gdh_A 111 LLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQA 190 (320)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTC
T ss_pred HHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCc
Confidence 567777777 45566789997665444567899999999999999999999999999997777765 443322455677
Q ss_pred ccc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhccccccc
Q psy3240 86 EHT-NIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLH 164 (274)
Q Consensus 86 ~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~ 164 (274)
... ++++++++||+|++|+|.+++|+++++++.++.||+|+++||+|||+++|+++|.+
T Consensus 191 ~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~-------------------- 250 (320)
T 1gdh_A 191 TFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVA-------------------- 250 (320)
T ss_dssp EECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHH--------------------
T ss_pred EEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHH--------------------
Confidence 776 89999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCc
Q psy3240 165 RVFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQ 244 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t 244 (274)
+|++|+|.||+|||+++|| |.++|||++|||++|||++++|
T Consensus 251 --------------------------------------aL~~g~i~gA~lDv~~~eP-~~~~~L~~~~nviltPH~~~~t 291 (320)
T 1gdh_A 251 --------------------------------------ALEAGRLAYAGFDVFAGEP-NINEGYYDLPNTFLFPHIGSAA 291 (320)
T ss_dssp --------------------------------------HHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECSSCTTCB
T ss_pred --------------------------------------HHHhCCCcEEEEeCCCCCC-CCCChhhhCCCEEECCcCCcCc
Confidence 9999999999999999999 8899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCC
Q psy3240 245 IETRQEMARITAQNIINTFHNKPMIY 270 (274)
Q Consensus 245 ~~~~~~~~~~~~~ni~~~~~g~~~~~ 270 (274)
.+++.++...+ +|+.+|+.|+++..
T Consensus 292 ~~~~~~~~~~~-~nl~~~~~g~~~~~ 316 (320)
T 1gdh_A 292 TQAREDMAHQA-NDLIDALFGGADMS 316 (320)
T ss_dssp HHHHHHHHHHH-HHHHHHHHTTSCCT
T ss_pred HHHHHHHHHHH-HHHHHHHcCCCCcc
Confidence 99999999999 99999999988653
No 23
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.8e-43 Score=324.47 Aligned_cols=198 Identities=17% Similarity=0.221 Sum_probs=176.0
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCC-
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGA- 85 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~- 85 (274)
++|++.|.+ .....++|.|+... .+.+|.|++|||||+|.||+++|++|+++|+++++|+++.. .. +.
T Consensus 93 ~~L~~~R~~~~~~~~~~~g~w~~~~----~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~----~~~ 163 (303)
T 1qp8_A 93 LLLAPYKRIIQYGEKMKRGDYGRDV----EIPLIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-EG----PWR 163 (303)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCCCS----CCCCCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-CS----SSC
T ss_pred HHHHHHhCHHHHHHHHHcCCCCCCC----CCCCCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-cc----Ccc
Confidence 567777777 44556779996431 23589999999999999999999999999997766665443 21 33
Q ss_pred cccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 86 EHTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 86 ~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
...++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++|+++|++
T Consensus 164 ~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~--------------------- 222 (303)
T 1qp8_A 164 FTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLR--------------------- 222 (303)
T ss_dssp CBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHH---------------------
T ss_pred cCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHH---------------------
Confidence 33589999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccC-CCCCCCCCCccccCCcEEEccCCCCC-
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVM-YPEPLPLDSPLLQLDNCVILPHIGSA- 243 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~-~~ep~~~~~~l~~~~nvi~tPH~~~~- 243 (274)
+|++|+|.||+|||| ++||+|+++|||++|||++|||+++.
T Consensus 223 -------------------------------------aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~ 265 (303)
T 1qp8_A 223 -------------------------------------ILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGY 265 (303)
T ss_dssp -------------------------------------HHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSS
T ss_pred -------------------------------------HHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCC
Confidence 999999999999999 88999999999999999999999998
Q ss_pred -cHHHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 244 -QIETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 244 -t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
|.++++++...+++|+.+|+.|+++.|.|+
T Consensus 266 ~t~e~~~~~~~~~~~nl~~~~~g~~~~~~v~ 296 (303)
T 1qp8_A 266 GNERVWRQMVMEAVRNLITYATGGRPRNIAK 296 (303)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCSCBCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCCCceeC
Confidence 999999999999999999999999999886
No 24
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=7.9e-43 Score=323.29 Aligned_cols=196 Identities=36% Similarity=0.576 Sum_probs=175.4
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|+.. ...|.+|.|++|||||+|.||+++|++++++|+++++|+++..+..+.+.|+.
T Consensus 110 ~~L~~~R~~~~~~~~~~~g~w~~~---~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~ 186 (307)
T 1wwk_A 110 LMFSVARKIAFADRKMREGVWAKK---EAMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGK 186 (307)
T ss_dssp HHHHHHTTHHHHHHHHTTTCCCTT---TCCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCE
T ss_pred HHHHHHhCHHHHHHHHHcCCCCcc---CcCCcccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCcc
Confidence 567777777 4445567899642 23578999999999999999999999999999987777665443225566777
Q ss_pred ccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccce
Q psy3240 87 HTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRV 166 (274)
Q Consensus 87 ~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~ 166 (274)
..++++++++||+|++|+|++++|+++++++.|+.||+|+++||+|||+++|+++|++
T Consensus 187 ~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~---------------------- 244 (307)
T 1wwk_A 187 FVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVK---------------------- 244 (307)
T ss_dssp ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHH----------------------
T ss_pred ccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHH----------------------
Confidence 7799999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcHH
Q psy3240 167 FTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQIE 246 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~~ 246 (274)
+|++|+|.||+||||++||+|.++|||++|||++|||++++|.+
T Consensus 245 ------------------------------------aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~ 288 (307)
T 1wwk_A 245 ------------------------------------ALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVE 288 (307)
T ss_dssp ------------------------------------HHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHH
T ss_pred ------------------------------------HHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHH
Confidence 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q psy3240 247 TRQEMARITAQNIINTFHN 265 (274)
Q Consensus 247 ~~~~~~~~~~~ni~~~~~g 265 (274)
++.++...+++|+.+|+.|
T Consensus 289 ~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 289 AQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999976
No 25
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=9.9e-43 Score=323.41 Aligned_cols=197 Identities=29% Similarity=0.468 Sum_probs=176.3
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|+. ..|.++.|++|||||+|.||+++|++++++|+++++|+++.....+...|+.
T Consensus 112 ~~L~~~R~~~~~~~~~~~g~w~~-----~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~ 186 (313)
T 2ekl_A 112 LMIAAARKMYTSMALAKSGIFKK-----IEGLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAK 186 (313)
T ss_dssp HHHHHHHTHHHHHHHHHTTCCCC-----CCCCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCE
T ss_pred HHHHHHhCHHHHHHHHHcCCCCC-----CCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCce
Confidence 567777777 445566799962 3468999999999999999999999999999977777655443225566777
Q ss_pred ccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccce
Q psy3240 87 HTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRV 166 (274)
Q Consensus 87 ~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~ 166 (274)
..++++++++||+|++|+|.+++|+++++++.++.||+|+++||+|||+++|+++|.+
T Consensus 187 ~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~---------------------- 244 (313)
T 2ekl_A 187 AVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLD---------------------- 244 (313)
T ss_dssp ECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHH----------------------
T ss_pred ecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHH----------------------
Confidence 6799999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCC---ccccCCcEEEccCCCCC
Q psy3240 167 FTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDS---PLLQLDNCVILPHIGSA 243 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~---~l~~~~nvi~tPH~~~~ 243 (274)
+|++|+|.||+|||+++||++ ++ |||++|||++|||++++
T Consensus 245 ------------------------------------aL~~g~i~ga~lDv~~~eP~~-~~~~~~L~~~~nviltPH~~~~ 287 (313)
T 2ekl_A 245 ------------------------------------YIKKGKVYAYATDVFWNEPPK-EEWELELLKHERVIVTTHIGAQ 287 (313)
T ss_dssp ------------------------------------HHHTTCEEEEEESCCSSSSCC-SHHHHHHHHSTTEEECCSCTTC
T ss_pred ------------------------------------HHHcCCCcEEEEecCCCCCCC-CcccchHhhCCCEEECCccCcC
Confidence 999999999999999999998 56 99999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCC
Q psy3240 244 QIETRQEMARITAQNIINTFHNKPMI 269 (274)
Q Consensus 244 t~~~~~~~~~~~~~ni~~~~~g~~~~ 269 (274)
|.++.+++...+++|+.+|+.|+|++
T Consensus 288 t~~~~~~~~~~~~~n~~~~~~g~~l~ 313 (313)
T 2ekl_A 288 TKEAQKRVAEMTTQNLLNAMKELGMI 313 (313)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999874
No 26
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=7.2e-42 Score=319.26 Aligned_cols=208 Identities=44% Similarity=0.768 Sum_probs=187.8
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCC
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGA 85 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~ 85 (274)
++|++.|.+ .....++|.|.+|.+..+.|.+|.|++|||||+|.||+.+|++++++|+++++|+++..... ....++
T Consensus 120 ~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 199 (330)
T 2gcg_A 120 LLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQA 199 (330)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTC
T ss_pred HHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCc
Confidence 566777776 44556679998766555668999999999999999999999999999998888887665444 445566
Q ss_pred cccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 86 EHTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 86 ~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
...++++++++||+|++|+|.+++|+++++++.++.||+|++|||+|||+++|+++|.+
T Consensus 200 ~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~--------------------- 258 (330)
T 2gcg_A 200 EFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQ--------------------- 258 (330)
T ss_dssp EECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHH---------------------
T ss_pred eeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHH---------------------
Confidence 66699999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcH
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQI 245 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~ 245 (274)
+|++|++.||+||||.+||++.++|||.++||++|||+|+.|.
T Consensus 259 -------------------------------------aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~ 301 (330)
T 2gcg_A 259 -------------------------------------ALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATH 301 (330)
T ss_dssp -------------------------------------HHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBH
T ss_pred -------------------------------------HHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcH
Confidence 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q psy3240 246 ETRQEMARITAQNIINTFHNKPMIYEVPL 274 (274)
Q Consensus 246 ~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 274 (274)
++..++...+++|+.+|++|+++.|.||+
T Consensus 302 ~~~~~~~~~~~~n~~~~~~g~~~~~~v~~ 330 (330)
T 2gcg_A 302 RTRNTMSLLAANNLLAGLRGEPMPSELKL 330 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCTTEECC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999999999999999999999999986
No 27
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=1.1e-41 Score=320.97 Aligned_cols=207 Identities=27% Similarity=0.404 Sum_probs=177.8
Q ss_pred HHHHHHhhh--ccchhccCCCCccCC---CCCCC-CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhh
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAP---NFMCG-PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADK 82 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~---~~~~g-~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~ 82 (274)
++|++.|.+ .....++|.|..... .+..| .+|+|++|||||+|.||+.+|++|+++|+++++|+++..+..+..
T Consensus 129 l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~ 208 (347)
T 1mx3_A 129 HILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA 208 (347)
T ss_dssp HHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH
T ss_pred HHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhHhh
Confidence 677777877 344556788843110 00113 689999999999999999999999999998777765544332445
Q ss_pred cCCccc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccc
Q psy3240 83 RGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEK 161 (274)
Q Consensus 83 ~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~ 161 (274)
.|+... +++|++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|++
T Consensus 209 ~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~----------------- 271 (347)
T 1mx3_A 209 LGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQ----------------- 271 (347)
T ss_dssp HTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHH-----------------
T ss_pred cCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHH-----------------
Confidence 677654 89999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCC-CCCccccCCcEEEccCC
Q psy3240 162 HLHRVFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLP-LDSPLLQLDNCVILPHI 240 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~-~~~~l~~~~nvi~tPH~ 240 (274)
+|++|+|.||+|||++.||++ .++||+.+||+++|||+
T Consensus 272 -----------------------------------------aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHi 310 (347)
T 1mx3_A 272 -----------------------------------------ALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHA 310 (347)
T ss_dssp -----------------------------------------HHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSC
T ss_pred -----------------------------------------HHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchH
Confidence 999999999999999999987 47999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHcCCCCC---Cccc
Q psy3240 241 GSAQIETRQEMARITAQNIINTFHNKPMI---YEVP 273 (274)
Q Consensus 241 ~~~t~~~~~~~~~~~~~ni~~~~~g~~~~---~~v~ 273 (274)
+++|.+++.+|...+++|+.+|+.|+++. |.|+
T Consensus 311 a~~t~~~~~~~~~~~~~ni~~~~~g~~~~~l~~~v~ 346 (347)
T 1mx3_A 311 AWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVN 346 (347)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTCSSBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcccCCCCC
Confidence 99999999999999999999999998654 7775
No 28
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=5e-42 Score=316.31 Aligned_cols=189 Identities=23% Similarity=0.338 Sum_probs=165.4
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|+..|.+ .....++|+|... + .++|+|+||||||+|.||+++|++|++||+++++|+++..... ...
T Consensus 92 ~~L~~~R~~~~~~~~~~~g~w~~~-~----~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----~~~ 162 (290)
T 3gvx_A 92 LLLAHAKNILENNELMKAGIFRQS-P----TTLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQN----VDV 162 (290)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCCC-C----CCCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTT----CSE
T ss_pred HHHHHHHhhhhhhhHhhhcccccC-C----ceeeecchheeeccCchhHHHHHHHHhhCcEEEEEeccccccc----ccc
Confidence 456677776 4455667999753 1 2789999999999999999999999999998777765543322 133
Q ss_pred cc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 87 HT-NIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 87 ~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
.. +++|++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|++
T Consensus 163 ~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~--------------------- 221 (290)
T 3gvx_A 163 ISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIG--------------------- 221 (290)
T ss_dssp ECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHH---------------------
T ss_pred ccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhh---------------------
Confidence 44 89999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCC-CCc
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIG-SAQ 244 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~-~~t 244 (274)
+|++|++.||+||||++||+ +|||++|||++|||+| ++|
T Consensus 222 -------------------------------------aL~~g~i~ga~lDV~~~EP~---~pL~~~~nvilTPHiag~~t 261 (290)
T 3gvx_A 222 -------------------------------------FLKERSDVWYLSDVWWNEPE---ITETNLRNAILSPHVAGGMS 261 (290)
T ss_dssp -------------------------------------HHHHCTTCEEEESCCTTTTS---CCSCCCSSEEECCSCSSCBT
T ss_pred -------------------------------------hhhhccceEEeeccccCCcc---cchhhhhhhhcCccccCCcc
Confidence 99999999999999999998 8999999999999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCC
Q psy3240 245 IETRQEMARITAQNIINTFHNKP 267 (274)
Q Consensus 245 ~~~~~~~~~~~~~ni~~~~~g~~ 267 (274)
.++.+++..++++||.+|++|+-
T Consensus 262 ~e~~~~~~~~~~~ni~~~~~~~~ 284 (290)
T 3gvx_A 262 GEIMDIAIQLAFENVRNFFEGEG 284 (290)
T ss_dssp TBCCHHHHHHHHHHHHHHTC---
T ss_pred chHHHHHHHHHHHHHHhhhcCCC
Confidence 99999999999999999999874
No 29
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=4.8e-41 Score=314.95 Aligned_cols=200 Identities=33% Similarity=0.597 Sum_probs=177.3
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|+. . ....|.+|.|++|||||+|.||+.+|++++++|+++++|+++.... .++.
T Consensus 131 l~L~~~R~~~~~~~~~~~g~w~~-~-~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~----~g~~ 204 (333)
T 3ba1_A 131 LILAVLRRICECDKYVRRGAWKF-G-DFKLTTKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPN----TNYT 204 (333)
T ss_dssp HHHHHHTTHHHHHHHHHTTGGGG-C-CCCCCCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTT----CCSE
T ss_pred HHHHHHhCHHHHHHHHHcCCCCc-c-ccccccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhc----cCce
Confidence 567777777 445566799963 2 2235789999999999999999999999999999877766544322 2444
Q ss_pred -ccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccc
Q psy3240 87 -HTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHR 165 (274)
Q Consensus 87 -~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~ 165 (274)
..++++++++||+|++|+|.+++|+++++++.++.||+|++|||+|||.++|+++|++
T Consensus 205 ~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~--------------------- 263 (333)
T 3ba1_A 205 YYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVS--------------------- 263 (333)
T ss_dssp EESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHH---------------------
T ss_pred ecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHH---------------------
Confidence 3489999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcH
Q psy3240 166 VFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQI 245 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~ 245 (274)
+|++|+++||+||||++||+|. +|||.+|||++|||+++.|.
T Consensus 264 -------------------------------------aL~~g~i~ga~lDv~~~EP~~~-~~L~~~~nviltPH~~~~t~ 305 (333)
T 3ba1_A 264 -------------------------------------ALVEGRLGGAGLDVFEREPEVP-EKLFGLENVVLLPHVGSGTV 305 (333)
T ss_dssp -------------------------------------HHHHTSSCEEEESCCTTTTCCC-GGGGGCTTEEECSSCTTCSH
T ss_pred -------------------------------------HHHcCCCeEEEEecCCCCCCCc-chhhcCCCEEECCcCCCCCH
Confidence 9999999999999999999877 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 246 ETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 246 ~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
+++.+++..+++|+.+|+.|+++.|.||
T Consensus 306 e~~~~~~~~~~~nl~~~~~g~~~~~~Vn 333 (333)
T 3ba1_A 306 ETRKVMADLVVGNLEAHFSGKPLLTPVV 333 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCSSBCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999999999986
No 30
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=4.4e-41 Score=316.48 Aligned_cols=207 Identities=28% Similarity=0.425 Sum_probs=180.7
Q ss_pred HHHHHHhhh--ccchhccCC---CCccCC-CCCCCCCCCCCEEEEEccChHHHHHHHHHc-cCCCeEEEEeCCCCChh-H
Q psy3240 9 IYIDVIKYV--STPVSCRGE---WKSWAP-NFMCGPALQNSTVGIVGCGRIGLSVLEKLI-PYKVSKFLYTSRSKKPE-A 80 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~---w~~~~~-~~~~g~~L~gktVGIIGlG~IG~~iA~~L~-~~G~~vv~~~~r~~~~~-a 80 (274)
++|++.|.+ .....++|. |..... ....|.+|+|++|||||+|.||+.+|++++ ++|+++++|+++..... +
T Consensus 124 l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~ 203 (348)
T 2w2k_A 124 LILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETE 203 (348)
T ss_dssp HHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH
T ss_pred HHHHHHhChHHHHHHHHcCCCcccccccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhH
Confidence 567788877 445566788 842110 113468999999999999999999999999 99997776665544443 4
Q ss_pred hhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcc
Q psy3240 81 DKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTN 159 (274)
Q Consensus 81 ~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~ 159 (274)
.+.|+... ++++++++||+|++|+|.+++|+++++++.++.||+|++|||+|||+++|+++|.+
T Consensus 204 ~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~--------------- 268 (348)
T 2w2k_A 204 KALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIA--------------- 268 (348)
T ss_dssp HHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHH---------------
T ss_pred hhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHH---------------
Confidence 44577766 89999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccC
Q psy3240 160 EKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPH 239 (274)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH 239 (274)
+|++|+|.||++|||++|| +.++||+.+|||++|||
T Consensus 269 -------------------------------------------aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nviltPH 304 (348)
T 2w2k_A 269 -------------------------------------------ALKSGKLLSAGLDVHEFEP-QVSKELIEMKHVTLTTH 304 (348)
T ss_dssp -------------------------------------------HHHTTSEEEEEESSCTTTT-SCCHHHHTSSSEEECCS
T ss_pred -------------------------------------------HHHhCCceEEEeccCCCCC-CCCchhhcCCCEEEcCc
Confidence 9999999999999999999 67889999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCcccC
Q psy3240 240 IGSAQIETRQEMARITAQNIINTFHNKPMIYEVPL 274 (274)
Q Consensus 240 ~~~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 274 (274)
+++.|.+++.+++..+++||.+|+.|+++.|.|+.
T Consensus 305 ~~~~t~e~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 339 (348)
T 2w2k_A 305 IGGVAIETFHEFERLTMTNIDRFLLQGKPLLTPAG 339 (348)
T ss_dssp CTTCSHHHHHHHHHHHHHHHHHHHHTCCCCSSBCS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCCcceecc
Confidence 99999999999999999999999999999999874
No 31
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=8e-41 Score=312.80 Aligned_cols=206 Identities=37% Similarity=0.611 Sum_probs=182.4
Q ss_pred HHHHHHhhh--ccchhccCCCC----ccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhh
Q psy3240 9 IYIDVIKYV--STPVSCRGEWK----SWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADK 82 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~----~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~ 82 (274)
++|++.|.+ .....++|.|. .|.+..+.|.+|.|++|||||+|.||+.+|++++++|+++++|+++.....+..
T Consensus 111 ~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 190 (334)
T 2dbq_A 111 LLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERE 190 (334)
T ss_dssp HHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcchhhHhh
Confidence 567777877 44556678996 454444557899999999999999999999999999997777665544322445
Q ss_pred cCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhccccc
Q psy3240 83 RGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKH 162 (274)
Q Consensus 83 ~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~ 162 (274)
.|+...++++++++||+|++|+|.+++|+++++++.++.||+|++|||+|||.++|+++|.+
T Consensus 191 ~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~------------------ 252 (334)
T 2dbq_A 191 LNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVK------------------ 252 (334)
T ss_dssp HCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHH------------------
T ss_pred cCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHH------------------
Confidence 57766789999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCC
Q psy3240 163 LHRVFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGS 242 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~ 242 (274)
+|++|+++||++|||.+|| +.++||+.+|||++|||+++
T Consensus 253 ----------------------------------------aL~~~~i~ga~lDv~~~EP-~~~~~L~~~~~vi~tPh~~~ 291 (334)
T 2dbq_A 253 ----------------------------------------ALKEGWIAGAGLDVFEEEP-YYNEELFKLDNVVLTPHIGS 291 (334)
T ss_dssp ----------------------------------------HHHHTSSSEEEESCCSSSS-CCCHHHHHCTTEEECSSCTT
T ss_pred ----------------------------------------HHHhCCeeEEEecCCCCCC-CCCchhhcCCCEEECCccCC
Confidence 8999999999999999999 88999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 243 AQIETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 243 ~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
.|.++..++...+++|+.+|+.|+++.+.|+
T Consensus 292 ~t~~~~~~~~~~~~~n~~~~~~g~~~~~~v~ 322 (334)
T 2dbq_A 292 ASFGAREGMAELVAKNLIAFKRGEIPPTLVN 322 (334)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTTCCCTTBSC
T ss_pred CcHHHHHHHHHHHHHHHHHHHcCCCCccccC
Confidence 9999999999999999999999999999886
No 32
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=9e-41 Score=312.65 Aligned_cols=204 Identities=28% Similarity=0.531 Sum_probs=179.1
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCC----CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhh
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCG----PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADK 82 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g----~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~ 82 (274)
++|++.|.+ .....++|.|+.|. ....| .+|.|++|||||+|.||+.+|++++++|+++++|+++.....+..
T Consensus 108 ~~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~ 186 (333)
T 2d0i_A 108 LIINLMRKIHYADKFIRRGEWESHA-KIWTGFKRIESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKE 186 (333)
T ss_dssp HHHHHHHCHHHHHHHHHTTCCCCHH-HHHTTSCCCCCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHcCCCCcCc-ccccCCcccCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhhhhh
Confidence 567777777 44556679996532 11235 799999999999999999999999999997777665544322445
Q ss_pred cCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhccccc
Q psy3240 83 RGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKH 162 (274)
Q Consensus 83 ~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~ 162 (274)
.|+...++++++++||+|++|+|.+++|+++++++.++.||+| ++||+|||.++|+++|++
T Consensus 187 ~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~------------------ 247 (333)
T 2d0i_A 187 LKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTE------------------ 247 (333)
T ss_dssp HTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHH------------------
T ss_pred cCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHH------------------
Confidence 5666668999999999999999999999999999999999999 999999999999999999
Q ss_pred ccceeecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCC-cEEEccCCC
Q psy3240 163 LHRVFTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLD-NCVILPHIG 241 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~-nvi~tPH~~ 241 (274)
+|++|++.||++|||.+||+| ++||+.+| ||++|||++
T Consensus 248 ----------------------------------------aL~~~~i~gaglDv~~~EP~~-~~~L~~~~~nviltPh~~ 286 (333)
T 2d0i_A 248 ----------------------------------------AIKQGKLKGYATDVFEKEPVR-EHELFKYEWETVLTPHYA 286 (333)
T ss_dssp ----------------------------------------HHHTTCBCEEEESCCSSSSCS-CCGGGGCTTTEEECCSCT
T ss_pred ----------------------------------------HHHcCCceEEEecCCCCCCCC-CchHHcCCCCEEEcCccC
Confidence 999999999999999999998 99999999 999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHcCCCCCCccc
Q psy3240 242 SAQIETRQEMARITAQNIINTFHNKPMIYEVP 273 (274)
Q Consensus 242 ~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 273 (274)
+.|.++..++...+++|+.+|+.|+++.|.|+
T Consensus 287 ~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~v~ 318 (333)
T 2d0i_A 287 GLALEAQEDVGFRAVENLLKVLRGEVPEDLVN 318 (333)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHTTCCCTTBSC
T ss_pred CCcHHHHHHHHHHHHHHHHHHHcCCCCcCccC
Confidence 99999999999999999999999999999886
No 33
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=3.5e-39 Score=307.16 Aligned_cols=168 Identities=27% Similarity=0.398 Sum_probs=151.7
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcc----cHH
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPD----THH 112 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~----T~~ 112 (274)
|.+|+||||||||+|+||+++|++|++|||++++|++. . .....+....+++|++++||+|++|+|++++ |++
T Consensus 114 g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~-~--~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~ 190 (381)
T 3oet_A 114 GFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPP-R--AARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLH 190 (381)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHH-H--HHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTT
T ss_pred CCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCC-h--HHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchh
Confidence 46899999999999999999999999999977777542 1 1122344567999999999999999999999 999
Q ss_pred hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecccCCcc
Q psy3240 113 LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTV 192 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 192 (274)
+++++.|++||+|++|||+|||++||++||++
T Consensus 191 li~~~~l~~mk~gailIN~aRG~vvde~aL~~------------------------------------------------ 222 (381)
T 3oet_A 191 LADETLIRRLKPGAILINACRGPVVDNAALLA------------------------------------------------ 222 (381)
T ss_dssp SBCHHHHHHSCTTEEEEECSCGGGBCHHHHHH------------------------------------------------
T ss_pred hcCHHHHhcCCCCcEEEECCCCcccCHHHHHH------------------------------------------------
Confidence 99999999999999999999999999999999
Q ss_pred ceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q psy3240 193 GIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQIETRQEMARITAQNIINTFHNKP 267 (274)
Q Consensus 193 ~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~~~~~~~~~~~~~ni~~~~~g~~ 267 (274)
||++|++.||+||||++||+|. ++||.++ +++|||+|++|.|++.++..++++|+.+|+.+.+
T Consensus 223 ----------aL~~g~i~gA~LDV~e~EP~~~-~~L~~~~-~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~~ 285 (381)
T 3oet_A 223 ----------RLNAGQPLSVVLDVWEGEPDLN-VALLEAV-DIGTSHIAGYTLEGKARGTTQVFEAYSAFIGREQ 285 (381)
T ss_dssp ----------HHHTTCCEEEEESCCTTTTSCC-HHHHHHS-SEECSSCTTCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ----------HHHhCCCeEEEeeccccCCCCc-chhhhCC-EEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999875 5688765 8999999999999999999999999999998854
No 34
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=9.5e-38 Score=308.20 Aligned_cols=204 Identities=30% Similarity=0.523 Sum_probs=181.4
Q ss_pred HHHHHHhhh--ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc
Q psy3240 9 IYIDVIKYV--STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE 86 (274)
Q Consensus 9 ~~l~~~r~~--~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~ 86 (274)
++|++.|.+ .....++|.|++.. +.|.+|.|++|||||+|+||+++|++|+++|+++++|+++.....+.+.|+.
T Consensus 110 ~~l~~~R~~~~~~~~~~~g~w~~~~---~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~ 186 (529)
T 1ygy_A 110 LLLAASRQIPAADASLREHTWKRSS---FSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIE 186 (529)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCGGG---CCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCE
T ss_pred HHHHHHhhhHHHHHHHHhCCCcccC---cCccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCcE
Confidence 567777777 44556779997532 3578999999999999999999999999999987777665432225566877
Q ss_pred ccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccce
Q psy3240 87 HTNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRV 166 (274)
Q Consensus 87 ~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~ 166 (274)
..++++++++||+|++|+|.+++|+++++++.++.||+|+++||+|||+++|+++|.+
T Consensus 187 ~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~---------------------- 244 (529)
T 1ygy_A 187 LLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALAD---------------------- 244 (529)
T ss_dssp ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHH----------------------
T ss_pred EcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHH----------------------
Confidence 7799999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcHH
Q psy3240 167 FTLGDSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQIE 246 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~~ 246 (274)
+|++|+++||++||+..||+ +++|||+++|+++|||+++.|.+
T Consensus 245 ------------------------------------al~~g~i~ga~lDv~~~eP~-~~~~L~~~~~vilTPh~~~~t~e 287 (529)
T 1ygy_A 245 ------------------------------------AITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTPHLGASTAE 287 (529)
T ss_dssp ------------------------------------HHHTSSEEEEEESSCSSSSC-SCCGGGGCTTEEECSSCSSCBHH
T ss_pred ------------------------------------HHHcCCccEEEEeeccCCCC-CCchHHhCCCEEEccccCCCCHH
Confidence 99999999999999999996 68999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcccC
Q psy3240 247 TRQEMARITAQNIINTFHNKPMIYEVPL 274 (274)
Q Consensus 247 ~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 274 (274)
+.++++..+++|+.+++.|+++.+.|++
T Consensus 288 a~~~~~~~~~~~l~~~l~~~~~~~~v~~ 315 (529)
T 1ygy_A 288 AQDRAGTDVAESVRLALAGEFVPDAVNV 315 (529)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTBCSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999998877763
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.1e-38 Score=299.22 Aligned_cols=170 Identities=27% Similarity=0.396 Sum_probs=152.8
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcc----cHH
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPD----THH 112 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~----T~~ 112 (274)
|.+|+|++|||||+|+||+++|++|+++|+++++|+++.. ....+....++++++++||+|++|+|++++ |++
T Consensus 111 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~---~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~ 187 (380)
T 2o4c_A 111 GADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQ---AREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRH 187 (380)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHH---HHSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTT
T ss_pred hcccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChh---hhccCcccCCHHHHHHhCCEEEEeccCccccccchhh
Confidence 4689999999999999999999999999997777654321 122344556999999999999999999999 999
Q ss_pred hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecccCCcc
Q psy3240 113 LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTV 192 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 192 (274)
+++++.|+.||+|+++||+|||+++|+++|++
T Consensus 188 li~~~~l~~mk~gailIN~sRG~vvd~~aL~~------------------------------------------------ 219 (380)
T 2o4c_A 188 LLDEPRLAALRPGTWLVNASRGAVVDNQALRR------------------------------------------------ 219 (380)
T ss_dssp SBCHHHHHTSCTTEEEEECSCGGGBCHHHHHH------------------------------------------------
T ss_pred hcCHHHHhhCCCCcEEEECCCCcccCHHHHHH------------------------------------------------
Confidence 99999999999999999999999999999999
Q ss_pred ceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q psy3240 193 GIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQIETRQEMARITAQNIINTFHNKPMI 269 (274)
Q Consensus 193 ~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~~~~~~~~~~~~~ni~~~~~g~~~~ 269 (274)
+|++|+|.||+||||++||+| +++|+. +||++|||+|++|.++..++..++++|+.+|+.|++..
T Consensus 220 ----------aL~~g~i~~A~LDV~~~EP~~-~~~l~~-~nvi~TPHiag~t~e~~~~~~~~~~~nl~~~l~g~~~~ 284 (380)
T 2o4c_A 220 ----------LLEGGADLEVALDVWEGEPQA-DPELAA-RCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAERV 284 (380)
T ss_dssp ----------HHHTTCCEEEEESCCTTTTSC-CHHHHT-TCSEECSSCTTCCHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred ----------HHHhCCCceEEeeeeccCCCC-chhhcc-CCEEEccccCcCCHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999999975 456776 59999999999999999999999999999999998644
No 36
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.95 E-value=2.3e-29 Score=246.49 Aligned_cols=170 Identities=14% Similarity=0.163 Sum_probs=147.6
Q ss_pred CCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCCh-hHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhc
Q psy3240 36 CGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKP-EADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLI 114 (274)
Q Consensus 36 ~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~-~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li 114 (274)
.|.++.|++|||||+|.||+.+|++|+++|+++++++++.... .+...|+...++++++++||+|++|+ .|+++|
T Consensus 271 ~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~----~t~~lI 346 (494)
T 3d64_A 271 TDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTAT----GNYHVI 346 (494)
T ss_dssp HCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECS----SSSCSB
T ss_pred cccccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECC----Cccccc
Confidence 4678999999999999999999999999999877776544332 23455777779999999999999997 688999
Q ss_pred cHHHHhcCCCCcEEEEcCCCch-hcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecccCCccc
Q psy3240 115 NRARLESMKPGAILINTSRGQL-VDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTVG 193 (274)
Q Consensus 115 ~~~~l~~mk~gailINv~RG~i-Vde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 193 (274)
+++.|+.||+|++|||+|||++ ||+++| +
T Consensus 347 ~~~~l~~MK~gAilINvgrg~veID~~aL-~------------------------------------------------- 376 (494)
T 3d64_A 347 NHDHMKAMRHNAIVCNIGHFDSEIDVAST-R------------------------------------------------- 376 (494)
T ss_dssp CHHHHHHCCTTEEEEECSSSSCSBCCGGG-T-------------------------------------------------
T ss_pred CHHHHhhCCCCcEEEEcCCCcchhchHHH-H-------------------------------------------------
Confidence 9999999999999999999999 599999 9
Q ss_pred eeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccC--CcEEEccCCC-CCcHH-HHHHHHHHHHHHHHHHHcCCCCC
Q psy3240 194 IYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQL--DNCVILPHIG-SAQIE-TRQEMARITAQNIINTFHNKPMI 269 (274)
Q Consensus 194 ~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~--~nvi~tPH~~-~~t~~-~~~~~~~~~~~ni~~~~~g~~~~ 269 (274)
||++|+|+ +++| .||+|.++|||.+ |||++| |+| +.+.+ +..+++.++++|+.+|++|+++.
T Consensus 377 ---------AL~~g~I~-~~~D---v~plp~~~pL~~l~~~nvv~t-H~atg~~~~~~~~~~a~~~~~ni~~~~~g~~~~ 442 (494)
T 3d64_A 377 ---------QYQWENIK-PQVD---HIIFPDGKRVILLAEGRLVNL-GCATGHPSFVMSNSFTNQTLAQIELFTRGGEYA 442 (494)
T ss_dssp ---------TSEEEEEE-TTEE---EEECTTSCEEEEEGGGSBHHH-HTSCCSCHHHHHHHHHHHHHHHHHHHHHGGGSC
T ss_pred ---------hhhcCccc-eeEE---EEECCCCCchhhcCCCCEEEE-eCcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 89999998 5555 4588889999999 999999 999 55644 67789999999999999999998
Q ss_pred Cccc
Q psy3240 270 YEVP 273 (274)
Q Consensus 270 ~~v~ 273 (274)
+.|.
T Consensus 443 n~V~ 446 (494)
T 3d64_A 443 NKVY 446 (494)
T ss_dssp SSEE
T ss_pred Ccee
Confidence 8873
No 37
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.95 E-value=2.2e-28 Score=238.74 Aligned_cols=173 Identities=14% Similarity=0.176 Sum_probs=149.5
Q ss_pred CCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCCh-hHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhc
Q psy3240 36 CGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKP-EADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLI 114 (274)
Q Consensus 36 ~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~-~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li 114 (274)
.|.++.|++|||||+|.||+.+|++++++|+++++++++.... .+...|+...++++++++||+|++|+ .|+++|
T Consensus 251 ~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~----~t~~lI 326 (479)
T 1v8b_A 251 TDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT----GNVDVI 326 (479)
T ss_dssp HCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC----SSSSSB
T ss_pred cccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECC----Chhhhc
Confidence 4578999999999999999999999999999877776554332 24456777779999999999999995 788999
Q ss_pred cHHHHhcCCCCcEEEEcCCCch-hcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecccCCccc
Q psy3240 115 NRARLESMKPGAILINTSRGQL-VDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTVG 193 (274)
Q Consensus 115 ~~~~l~~mk~gailINv~RG~i-Vde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 193 (274)
+++.|+.||+|++|||+|||++ ||+++|.+..
T Consensus 327 ~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~----------------------------------------------- 359 (479)
T 1v8b_A 327 KLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYK----------------------------------------------- 359 (479)
T ss_dssp CHHHHTTCCTTCEEEECSSTTTSBCHHHHHTST-----------------------------------------------
T ss_pred CHHHHhhcCCCcEEEEeCCCCccccchhhhccc-----------------------------------------------
Confidence 9999999999999999999999 8999998811
Q ss_pred eeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccC--CcEEEccCCC-CCcHH-HHHHHHHHHHHHHHHHHcCC--C
Q psy3240 194 IYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQL--DNCVILPHIG-SAQIE-TRQEMARITAQNIINTFHNK--P 267 (274)
Q Consensus 194 ~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~--~nvi~tPH~~-~~t~~-~~~~~~~~~~~ni~~~~~g~--~ 267 (274)
||++|+|+ +++||+ |+|.++|||.+ ||+++| |+| +.+.+ ....++.++++|+..|++|+ +
T Consensus 360 ---------AL~~g~I~-a~lDv~---plp~~~~l~~l~~~nvv~t-H~atghp~e~~~~s~a~~~~~ni~~~~~g~~~~ 425 (479)
T 1v8b_A 360 ---------GIHIENVK-PQVDRI---TLPNGNKIIVLARGRLLNL-GCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNK 425 (479)
T ss_dssp ---------TCEEEEEE-TTEEEE---ECTTSCEEEEEGGGSBHHH-HSSCCSCHHHHHHHHHHHHHHHHHHHHTTTSSS
T ss_pred ---------cceeeeEe-eeEEEE---ECCCCCeeeEecCCCEEEE-eccCCCCchhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 67889998 899998 66778999999 999999 999 56755 67788889999999999999 8
Q ss_pred CCCccc
Q psy3240 268 MIYEVP 273 (274)
Q Consensus 268 ~~~~v~ 273 (274)
+.|.|.
T Consensus 426 l~n~V~ 431 (479)
T 1v8b_A 426 YENKVY 431 (479)
T ss_dssp CCSSEE
T ss_pred CCcceE
Confidence 888653
No 38
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.83 E-value=8e-22 Score=189.83 Aligned_cols=156 Identities=15% Similarity=0.270 Sum_probs=126.2
Q ss_pred CCCC-CCCCEEEEEccChHHHHHHHHHcc-CCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCE-EEEcCCCCcccHH
Q psy3240 36 CGPA-LQNSTVGIVGCGRIGLSVLEKLIP-YKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDF-IIITSALTPDTHH 112 (274)
Q Consensus 36 ~g~~-L~gktVGIIGlG~IG~~iA~~L~~-~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDv-Vil~lPlt~~T~~ 112 (274)
.|.+ |+|+||+|+|+|+||+.+|++|++ ||++++.++++.... .. ....+++++++.+|. .++ +|+ ++|++
T Consensus 205 ~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~-~~---~~gvdl~~L~~~~d~~~~l-~~l-~~t~~ 278 (419)
T 1gtm_A 205 LGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGI-YN---PDGLNADEVLKWKNEHGSV-KDF-PGATN 278 (419)
T ss_dssp TTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEE-EE---EEEECHHHHHHHHHHHSSS-TTC-TTSEE
T ss_pred hCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccc-cC---ccCCCHHHHHHHHHhcCEe-ecC-ccCee
Confidence 4677 999999999999999999999999 999877776554321 11 112367777765553 222 465 57778
Q ss_pred hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecccCCcc
Q psy3240 113 LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTV 192 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 192 (274)
++.+.|..||+ .++||++||.+||+++ ++
T Consensus 279 -i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~------------------------------------------------ 307 (419)
T 1gtm_A 279 -ITNEELLELEV-DVLAPAAIEEVITKKN-AD------------------------------------------------ 307 (419)
T ss_dssp -ECHHHHHHSCC-SEEEECSCSCCBCTTG-GG------------------------------------------------
T ss_pred -eCHHHHHhCCC-CEEEECCCcccCCHHH-HH------------------------------------------------
Confidence 78888999988 6999999999999999 57
Q ss_pred ceeeehhhhHHHhcCceeEEEeccCCCCCCCCC-CccccCCcEEEccCC----C-----------------CCcHHHHHH
Q psy3240 193 GIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLD-SPLLQLDNCVILPHI----G-----------------SAQIETRQE 250 (274)
Q Consensus 193 ~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~-~~l~~~~nvi~tPH~----~-----------------~~t~~~~~~ 250 (274)
+|+++.|.+++ +||++++ ++|+..+||++|||+ | |.+.++..+
T Consensus 308 ----------aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E~~qn~~~~~w~~~ev~~~ 372 (419)
T 1gtm_A 308 ----------NIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRER 372 (419)
T ss_dssp ----------GCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred ----------HhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCcceeeeehhhhcccccccCHHHHHHH
Confidence 88999999887 8998764 799999999999999 6 667888999
Q ss_pred HHHHHHHHHHHHH
Q psy3240 251 MARITAQNIINTF 263 (274)
Q Consensus 251 ~~~~~~~ni~~~~ 263 (274)
+..++.+|+.+++
T Consensus 373 l~~~m~~~~~~~~ 385 (419)
T 1gtm_A 373 LDKKMTKAFYDVY 385 (419)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999889988887
No 39
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.81 E-value=2.2e-20 Score=183.13 Aligned_cols=171 Identities=16% Similarity=0.111 Sum_probs=136.5
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
+..+.|++|+|+|+|.||+.+|++++++|++++++++...+.. +.+.|+...+++++++.+|+|+.|++ +.++++
T Consensus 269 ~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atg----t~~~i~ 344 (494)
T 3ce6_A 269 DALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATG----NKDIIM 344 (494)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSS----SSCSBC
T ss_pred CCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCC----CHHHHH
Confidence 3578999999999999999999999999997666665443333 56678877789999999999999975 445788
Q ss_pred HHHHhcCCCCcEEEEcCCCch-hcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecccCCccce
Q psy3240 116 RARLESMKPGAILINTSRGQL-VDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTVGI 194 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~i-Vde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 194 (274)
.+.++.||+|++++|+||++. +|.++|.+.
T Consensus 345 ~~~l~~mk~ggilvnvG~~~~eId~~aL~~~------------------------------------------------- 375 (494)
T 3ce6_A 345 LEHIKAMKDHAILGNIGHFDNEIDMAGLERS------------------------------------------------- 375 (494)
T ss_dssp HHHHHHSCTTCEEEECSSSGGGBCHHHHHHT-------------------------------------------------
T ss_pred HHHHHhcCCCcEEEEeCCCCCccCHHHHHHh-------------------------------------------------
Confidence 889999999999999999998 899988770
Q ss_pred eeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEE----EccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCC
Q psy3240 195 YFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCV----ILPHIGSAQIETRQEMARITAQNIINTFHNKPMIY 270 (274)
Q Consensus 195 ~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi----~tPH~~~~t~~~~~~~~~~~~~ni~~~~~g~~~~~ 270 (274)
+|++++|. +++|+++.++....-.++..+|++ +|||+++.+.++ +...+++++..+.+|+++.+
T Consensus 376 --------aL~~~~I~-~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~a~~~~~s---~~~qa~~ai~~~~~g~~~~~ 443 (494)
T 3ce6_A 376 --------GATRVNVK-PQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNS---FANQTIAQIELWTKNDEYDN 443 (494)
T ss_dssp --------TCEEEEEE-TTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSCHHHHHHH---HHHHHHHHHHHHHTGGGCCS
T ss_pred --------hhccceEE-EEEEEeecCCcchHHHHHhCCCEEeccCCCCCccccchHH---HHHHHHHHHHHHHcCCCCCC
Confidence 45667777 567887654322222367788998 999999887754 46778999999999988766
Q ss_pred cc
Q psy3240 271 EV 272 (274)
Q Consensus 271 ~v 272 (274)
.|
T Consensus 444 ~V 445 (494)
T 3ce6_A 444 EV 445 (494)
T ss_dssp SE
T ss_pred EE
Confidence 55
No 40
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.69 E-value=3.1e-16 Score=148.39 Aligned_cols=130 Identities=17% Similarity=0.304 Sum_probs=104.6
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhh-cCCc-------ccCHHHHhcccCEEEEcC--CC
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADK-RGAE-------HTNIDDLCKQSDFIIITS--AL 106 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~-~g~~-------~~sl~ell~~aDvVil~l--Pl 106 (274)
.++.|++|+|+|+|.||+.+|+.++++|+++++++++..+.+ +.+ .|.. ..+++++++++|+|+.++ |.
T Consensus 164 ~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~ 243 (377)
T 2vhw_A 164 PGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG 243 (377)
T ss_dssp TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC
Confidence 479999999999999999999999999997777776544333 332 4543 236778899999999977 54
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeec
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHM 186 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (274)
+ ++.++++++.++.||+|+++||+|. .
T Consensus 244 ~-~t~~li~~~~l~~mk~g~~iV~va~----------~------------------------------------------ 270 (377)
T 2vhw_A 244 A-KAPKLVSNSLVAHMKPGAVLVDIAI----------D------------------------------------------ 270 (377)
T ss_dssp S-CCCCCBCHHHHTTSCTTCEEEEGGG----------G------------------------------------------
T ss_pred C-CCcceecHHHHhcCCCCcEEEEEec----------C------------------------------------------
Confidence 4 6888999999999999999999982 1
Q ss_pred ccCCccceeeehhhhHHHhcCceeEEEeccCCC-CCCCCCCccccCCcEE--EccCCCCCcHH
Q psy3240 187 IMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYP-EPLPLDSPLLQLDNCV--ILPHIGSAQIE 246 (274)
Q Consensus 187 i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~-ep~~~~~~l~~~~nvi--~tPH~~~~t~~ 246 (274)
.| | |++. ||++.++|++..+||+ +|||+++.+..
T Consensus 271 -------------------~G---g----v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~ 307 (377)
T 2vhw_A 271 -------------------QG---G----CFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPK 307 (377)
T ss_dssp -------------------TT---C----SBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHH
T ss_pred -------------------CC---C----ccccccCCCCCCCEEEECCEEEEecCCcchhhHH
Confidence 11 0 5666 8888899999999998 99999999865
No 41
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.68 E-value=4.7e-17 Score=157.36 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=89.2
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
+.+|.||+|+|+|+|.||+.+|+++++|||++++++..+.... +...|+...++++++++||+|+++. .|+++|+
T Consensus 242 g~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~at----gt~~lI~ 317 (464)
T 3n58_A 242 DVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTT----GNKDVIT 317 (464)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECC----SSSSSBC
T ss_pred CCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECC----CCccccC
Confidence 5789999999999999999999999999997766654332222 4456777789999999999999864 4678999
Q ss_pred HHHHhcCCCCcEEEEcCCCch-hcHHHHHh
Q psy3240 116 RARLESMKPGAILINTSRGQL-VDQEALID 144 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~i-Vde~aL~~ 144 (274)
++.|+.||+|++|||+|||.+ +|.++|.+
T Consensus 318 ~e~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 318 IDHMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp HHHHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred HHHHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 999999999999999999998 89988875
No 42
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.66 E-value=1.3e-16 Score=154.02 Aligned_cols=104 Identities=14% Similarity=0.221 Sum_probs=90.3
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
+.++.|++|+|+|+|.||+.+|++|+++|++++++++...... +...|+...+++|++++||+|++ ++.|+++++
T Consensus 206 g~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVil----t~gt~~iI~ 281 (436)
T 3h9u_A 206 DVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVT----TTGNDDIIT 281 (436)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEE----CSSCSCSBC
T ss_pred CCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEE----CCCCcCccC
Confidence 5789999999999999999999999999997776665433322 45678777899999999999997 447888999
Q ss_pred HHHHhcCCCCcEEEEcCCCch-hcHHHHHh
Q psy3240 116 RARLESMKPGAILINTSRGQL-VDQEALID 144 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~i-Vde~aL~~ 144 (274)
++.|+.||+|++|||+|||.+ +|.++|.+
T Consensus 282 ~e~l~~MK~gAIVINvgRg~vEID~~~L~~ 311 (436)
T 3h9u_A 282 SEHFPRMRDDAIVCNIGHFDTEIQVAWLKA 311 (436)
T ss_dssp TTTGGGCCTTEEEEECSSSGGGBCHHHHHH
T ss_pred HHHHhhcCCCcEEEEeCCCCCccCHHHHHh
Confidence 999999999999999999997 89999987
No 43
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.65 E-value=1.7e-15 Score=140.05 Aligned_cols=172 Identities=17% Similarity=0.133 Sum_probs=112.6
Q ss_pred ccchhccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh-HhhcCCc--c-cCHH
Q psy3240 18 STPVSCRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE-ADKRGAE--H-TNID 91 (274)
Q Consensus 18 ~~~~~~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~-a~~~g~~--~-~sl~ 91 (274)
+.....++.|.+...+.+ .++..++|||||+|.||+++|+.|+..|. ++++|+++....+ +.+.|+. . .+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~--~~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~ 88 (314)
T 3ggo_A 11 SSGLVPRGSHMKNIIKIL--KSLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA 88 (314)
T ss_dssp --------------------CCCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTT
T ss_pred ccCccccccCcCcCCchh--hhcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHH
Confidence 444566788865332222 34556899999999999999999999998 7777765543333 5556662 2 4788
Q ss_pred H-HhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecC
Q psy3240 92 D-LCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLG 170 (274)
Q Consensus 92 e-ll~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~ 170 (274)
+ ++++||+|++|+|.. .+..++ ++..+.++++++++|+++.+....+++.+.+.
T Consensus 89 ~~~~~~aDvVilavp~~-~~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~----------------------- 143 (314)
T 3ggo_A 89 KVEDFSPDFVMLSSPVR-TFREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILG----------------------- 143 (314)
T ss_dssp GGGGGCCSEEEECSCGG-GHHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG-----------------------
T ss_pred HHhhccCCEEEEeCCHH-HHHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcC-----------------------
Confidence 8 899999999999965 345555 46677799999999999887655556555221
Q ss_pred CCcccCccceeeeeecccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcHHHHHH
Q psy3240 171 DSFHKGHVSAFIFIHMIMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQIETRQE 250 (274)
Q Consensus 171 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~~~~~~ 250 (274)
..|++.||++|.+ .+|.-. +...|+....+++||+-+. +.++.+.
T Consensus 144 --------~~~v~~hPm~G~e-------------~sG~~~-------------A~~~Lf~g~~~il~~~~~~-~~~~~~~ 188 (314)
T 3ggo_A 144 --------KRFVGGHPIAGTE-------------KSGVEY-------------SLDNLYEGKKVILTPTKKT-DKKRLKL 188 (314)
T ss_dssp --------GGEECEEECCCCC-------------CCSGGG-------------CCTTTTTTCEEEECCCTTS-CHHHHHH
T ss_pred --------CCEEecCcccCCc-------------ccchhh-------------hhhhhhcCCEEEEEeCCCC-CHHHHHH
Confidence 2689999999987 344332 3467889999999998443 4444444
Q ss_pred H
Q psy3240 251 M 251 (274)
Q Consensus 251 ~ 251 (274)
+
T Consensus 189 v 189 (314)
T 3ggo_A 189 V 189 (314)
T ss_dssp H
T ss_pred H
Confidence 3
No 44
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.61 E-value=5.6e-16 Score=142.70 Aligned_cols=114 Identities=12% Similarity=0.188 Sum_probs=98.7
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccH--HH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINR--AR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~--~~ 118 (274)
++||+||+|.||..||++|.+.|.++++|+++..+.+ ..+.|+..+ ++.|+++.||+|++|+|..++++.++.. ..
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 6899999999999999999999997777765444433 556788765 8999999999999999999998888742 47
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 119 LESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
++.+++|.++||+++..+-+...+.+.++++|+.|+|+
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEec
Confidence 88899999999999999999999999999999999994
No 45
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.60 E-value=1.1e-15 Score=147.39 Aligned_cols=103 Identities=17% Similarity=0.272 Sum_probs=87.2
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
+..+.|++|+|+|+|.||+.+|++|+++|+++++++.+..+.. +...|+...++++++++||+|++| +.|+++|+
T Consensus 215 ~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~a----tgt~~lI~ 290 (435)
T 3gvp_A 215 DMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITC----TGNKNVVT 290 (435)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC----SSCSCSBC
T ss_pred CceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEEC----CCCcccCC
Confidence 4689999999999999999999999999997666654432222 456677777999999999999995 46788999
Q ss_pred HHHHhcCCCCcEEEEcCCCch-hcHHHHH
Q psy3240 116 RARLESMKPGAILINTSRGQL-VDQEALI 143 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~i-Vde~aL~ 143 (274)
++.|+.||+|+++||+|||++ +|.++|.
T Consensus 291 ~e~l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 291 REHLDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp HHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred HHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence 999999999999999999998 6777664
No 46
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.59 E-value=3.3e-15 Score=136.56 Aligned_cols=114 Identities=15% Similarity=0.242 Sum_probs=87.9
Q ss_pred CCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc---cCHHHHhcccCEEEEcCCCCcccH
Q psy3240 36 CGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH---TNIDDLCKQSDFIIITSALTPDTH 111 (274)
Q Consensus 36 ~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~---~sl~ell~~aDvVil~lPlt~~T~ 111 (274)
.|.++.|++|||||+|.||+.+|++|+++|+++++++++..+.. ..+.|+.. .++++++++||+|++|+|.
T Consensus 151 ~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~----- 225 (300)
T 2rir_A 151 TDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS----- 225 (300)
T ss_dssp CSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-----
T ss_pred cCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-----
Confidence 46799999999999999999999999999997777776543322 33456542 4789999999999999997
Q ss_pred HhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhh
Q psy3240 112 HLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMV 157 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~ 157 (274)
++++++.++.||+++++||++||..-.. + +..+..|+.++|+.
T Consensus 226 ~~i~~~~~~~mk~g~~lin~a~g~~~~~--~-~~a~~~G~~~i~~p 268 (300)
T 2rir_A 226 MILNQTVLSSMTPKTLILDLASRPGGTD--F-KYAEKQGIKALLAP 268 (300)
T ss_dssp CCBCHHHHTTSCTTCEEEECSSTTCSBC--H-HHHHHHTCEEEECC
T ss_pred hhhCHHHHHhCCCCCEEEEEeCCCCCcC--H-HHHHHCCCEEEECC
Confidence 6788889999999999999999754321 2 33344566555443
No 47
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.59 E-value=1.8e-15 Score=138.85 Aligned_cols=115 Identities=15% Similarity=0.158 Sum_probs=98.1
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHh
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINRARLE 120 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~ 120 (274)
+||||||+|.||..||++|...|.++++|+++..+.+ ..+.|+..+ ++.|+++.||+|++|+|..+..+.++..+.++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 6899999999999999999999998777776555444 556677765 89999999999999999888888888888999
Q ss_pred cCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhh
Q psy3240 121 SMKPGAILINTSRGQLVDQEALIDFIADIRVISISMV 157 (274)
Q Consensus 121 ~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~ 157 (274)
.++++.++||+++..+-..+.+.+.++++|+.|+|+-
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldap 122 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAP 122 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCC
Confidence 9999999999999999999999999999999999953
No 48
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.58 E-value=3.8e-15 Score=135.91 Aligned_cols=109 Identities=17% Similarity=0.222 Sum_probs=85.3
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc---cCHHHHhcccCEEEEcCCCCcccHH
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH---TNIDDLCKQSDFIIITSALTPDTHH 112 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~---~sl~ell~~aDvVil~lPlt~~T~~ 112 (274)
|.++.|++|||||+|.||+.+|++|+++|+++++++++..+.. ..+.|+.. .++++++++||+|++|+|. +
T Consensus 150 ~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~ 224 (293)
T 3d4o_A 150 DFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-----L 224 (293)
T ss_dssp SSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-----C
T ss_pred CCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-----H
Confidence 5689999999999999999999999999997777765543322 34456653 3788999999999999996 6
Q ss_pred hccHHHHhcCCCCcEEEEcCCCch-hcHHHHHhhhhhhhheee
Q psy3240 113 LINRARLESMKPGAILINTSRGQL-VDQEALIDFIADIRVISI 154 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~i-Vde~aL~~~L~~~~i~~~ 154 (274)
+++++.++.||+++++||++||.. ++. +..+..|+.++
T Consensus 225 ~i~~~~l~~mk~~~~lin~ar~~~~~~~----~~a~~~Gv~~~ 263 (293)
T 3d4o_A 225 VVTANVLAEMPSHTFVIDLASKPGGTDF----RYAEKRGIKAL 263 (293)
T ss_dssp CBCHHHHHHSCTTCEEEECSSTTCSBCH----HHHHHHTCEEE
T ss_pred HhCHHHHHhcCCCCEEEEecCCCCCCCH----HHHHHCCCEEE
Confidence 788899999999999999999754 333 33344455544
No 49
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.57 E-value=2.7e-15 Score=141.23 Aligned_cols=158 Identities=18% Similarity=0.342 Sum_probs=107.2
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhh-cCCc-------ccCHHHHhcccCEEEEcCCCCc
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADK-RGAE-------HTNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~-~g~~-------~~sl~ell~~aDvVil~lPlt~ 108 (274)
.++.+++|+|+|.|.||+.+|+.++++|+++++++++..+.+ ..+ .+.. ..+++++++.+|+|+.+++...
T Consensus 162 ~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 162 PGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp TBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 479999999999999999999999999998777776544333 222 4442 2257788899999999999765
Q ss_pred -ccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecc
Q psy3240 109 -DTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMI 187 (274)
Q Consensus 109 -~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 187 (274)
.+..++.++.++.||+|+++||++. .
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v~~----------~------------------------------------------- 268 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDVAV----------D------------------------------------------- 268 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC-------------------------------------------------------
T ss_pred cccchhHHHHHHHhhcCCCEEEEEec----------C-------------------------------------------
Confidence 5777889999999999999999982 1
Q ss_pred cCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEE---------EccCCCCC--cHHHHHHHHHHHH
Q psy3240 188 MGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCV---------ILPHIGSA--QIETRQEMARITA 256 (274)
Q Consensus 188 ~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi---------~tPH~~~~--t~~~~~~~~~~~~ 256 (274)
.| |+ +||+ ||.+.+.|++..+++. +|||.++. +.+....+..++.
T Consensus 269 ------------------~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l~~ 324 (369)
T 2eez_A 269 ------------------QG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAE 324 (369)
T ss_dssp -----------------------------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------CC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHHHh
Confidence 11 33 7887 7777788999999999 88998885 4566778888888
Q ss_pred HHHHHHHcCCCCCCcc
Q psy3240 257 QNIINTFHNKPMIYEV 272 (274)
Q Consensus 257 ~ni~~~~~g~~~~~~v 272 (274)
+++..+..++++.+.+
T Consensus 325 ~g~~~~~~~~~l~~~~ 340 (369)
T 2eez_A 325 KGLDALLEDAALLKGL 340 (369)
T ss_dssp HTTHHHHSCHHHHTTE
T ss_pred cChhhhhcChHHhcCE
Confidence 8887777776555443
No 50
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.56 E-value=8.2e-15 Score=134.41 Aligned_cols=121 Identities=14% Similarity=0.133 Sum_probs=96.2
Q ss_pred CCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHH
Q psy3240 35 MCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHH 112 (274)
Q Consensus 35 ~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~ 112 (274)
...+....++|||||+|.||..+|+.|...|.++++|+++..+.. ..+.|+... +++++++.||+|++|+|....++.
T Consensus 14 ~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~ 93 (310)
T 3doj_A 14 LVPRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALS 93 (310)
T ss_dssp ----CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHH
T ss_pred cCcccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHH
Confidence 444566778999999999999999999999997777765544444 456677654 899999999999999998777777
Q ss_pred hc--cHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 113 LI--NRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 113 li--~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
++ ..+.++.+++|+++||+++..+...+.+.+.+++.|+.|+|
T Consensus 94 v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~ 138 (310)
T 3doj_A 94 VVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE 138 (310)
T ss_dssp HHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 66 24567789999999999999999999999888776666555
No 51
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=2e-14 Score=134.80 Aligned_cols=142 Identities=16% Similarity=0.184 Sum_probs=104.8
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc-cCHHHHhcc----cCEEEEcCCCCcccHHhcc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH-TNIDDLCKQ----SDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~-~sl~ell~~----aDvVil~lPlt~~T~~li~ 115 (274)
-++|||||+|+||+++|+.|+..|.++++|+++..... +.+.|+.. .++++++++ ||+|++|+|. ..+..++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl~ 86 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLLD 86 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHHH
Confidence 35799999999999999999999998777765443333 55677754 378888765 6999999995 46666663
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecccCCcccee
Q psy3240 116 RARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTVGIY 195 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 195 (274)
+ +..++++++++|+++.+....+++.+. +. ...|++.||++|.+
T Consensus 87 -~-l~~~~~~~iv~Dv~Svk~~i~~~~~~~----------------------------~~--~~~~v~~HPmaG~e---- 130 (341)
T 3ktd_A 87 -A-VHTHAPNNGFTDVVSVKTAVYDAVKAR----------------------------NM--QHRYVGSHPMAGTA---- 130 (341)
T ss_dssp -H-HHHHCTTCCEEECCSCSHHHHHHHHHT----------------------------TC--GGGEECEEECCSCC----
T ss_pred -H-HHccCCCCEEEEcCCCChHHHHHHHHh----------------------------CC--CCcEecCCcccccc----
Confidence 3 333589999999998776555555551 11 25799999999997
Q ss_pred eehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCC
Q psy3240 196 FIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGS 242 (274)
Q Consensus 196 ~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~ 242 (274)
++|.-. .+..|+...++++||+-..
T Consensus 131 ---------~sG~~a-------------a~~~Lf~g~~~iltp~~~~ 155 (341)
T 3ktd_A 131 ---------NSGWSA-------------SMDGLFKRAVWVVTFDQLF 155 (341)
T ss_dssp ----------CCGGG-------------CCSSTTTTCEEEECCGGGT
T ss_pred ---------ccchhh-------------hhhHHhcCCeEEEEeCCCC
Confidence 455443 3467999999999997543
No 52
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.52 E-value=8.9e-15 Score=134.06 Aligned_cols=119 Identities=12% Similarity=0.106 Sum_probs=98.0
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
.++..++|||||+|.||+.+|+.|...|.++++|+++..+.+ ..+.|+... ++++++++||+|++++|....++.++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 456778999999999999999999999997777755443333 444577654 899999999999999998777888875
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 116 RARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
.+.+..+++|.++||++++.+.+.+++.+.+++.|+.|+|+
T Consensus 85 ~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vda 125 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKG 125 (306)
T ss_dssp STTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred ccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence 32355678999999999999999999999999889988885
No 53
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.51 E-value=1.4e-13 Score=123.47 Aligned_cols=148 Identities=17% Similarity=0.143 Sum_probs=106.2
Q ss_pred CEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh-HhhcCCc---ccCHHHHhc-ccCEEEEcCCCCcccHHhcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE-ADKRGAE---HTNIDDLCK-QSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~-a~~~g~~---~~sl~ell~-~aDvVil~lPlt~~T~~li~ 115 (274)
++|+|||+|.||+.+|+.|+..|. ++++++++..... ..+.|+. ..+++++++ +||+|++++|.. .+..++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH
Confidence 589999999999999999999887 7777665433333 4455664 237888999 999999999964 5556664
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecccCCcccee
Q psy3240 116 RARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTVGIY 195 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 195 (274)
+..+.++++++++|++++.....+.+.+.+.+ .|++.||+.|.+
T Consensus 81 -~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~-------------------------------~~v~~~p~~~~~---- 124 (281)
T 2g5c_A 81 -KLSYILSEDATVTDQGSVKGKLVYDLENILGK-------------------------------RFVGGHPIAGTE---- 124 (281)
T ss_dssp -HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-------------------------------GEECEEEECCCS----
T ss_pred -HHHhhCCCCcEEEECCCCcHHHHHHHHHhccc-------------------------------cceeeccccCCc----
Confidence 45667899999999999886666666663321 278888888875
Q ss_pred eehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCCcHHHHHH
Q psy3240 196 FIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSAQIETRQE 250 (274)
Q Consensus 196 ~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~t~~~~~~ 250 (274)
.+| |.....+++...+++++||.+.. .+..+.
T Consensus 125 ---------~~g-------------p~~a~~~l~~g~~~~~~~~~~~~-~~~~~~ 156 (281)
T 2g5c_A 125 ---------KSG-------------VEYSLDNLYEGKKVILTPTKKTD-KKRLKL 156 (281)
T ss_dssp ---------CCS-------------GGGCCSSTTTTCEEEECCCSSSC-HHHHHH
T ss_pred ---------cCC-------------hhhhhhHHhCCCCEEEecCCCCC-HHHHHH
Confidence 233 22244678888889999997654 334433
No 54
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.51 E-value=2.4e-14 Score=131.93 Aligned_cols=118 Identities=10% Similarity=0.200 Sum_probs=96.6
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccH
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~ 116 (274)
....++|||||+|.||+.+|+.|...|.++++|+++..+.+ ..+.|+... ++++++++||+|++++|....++.++..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 34567999999999999999999999997777655443333 444577654 8999999999999999987777777643
Q ss_pred -HHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 117 -ARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 117 -~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
+.++.++++.++||++++.+...+.+.+.+++.|+.++|+
T Consensus 108 ~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~ 148 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDT 148 (320)
T ss_dssp TCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeC
Confidence 5667799999999999999999999999998888888874
No 55
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.50 E-value=1e-13 Score=126.26 Aligned_cols=113 Identities=16% Similarity=0.236 Sum_probs=96.7
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccHHHH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINRARL 119 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l 119 (274)
.++|||||+|.||+.+|+.|...|.++++|+++..+.+ ..+.|+... +++++++ ||+|++|+|....++.++ .+.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 46899999999999999999999998888876655544 556677665 8999999 999999999877778777 6778
Q ss_pred hcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 120 ESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 120 ~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
+.++++.++||++++.+...+.+.+.+++.|+.|+|.
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~ 129 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDA 129 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEEC
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeC
Confidence 8899999999999999999999999888888887774
No 56
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.48 E-value=1e-13 Score=130.59 Aligned_cols=115 Identities=13% Similarity=0.298 Sum_probs=96.7
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhccc---CEEEEcCCCCcccHHhc
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQS---DFIIITSALTPDTHHLI 114 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~a---DvVil~lPlt~~T~~li 114 (274)
+++++|||||+|.||+.+|+.|...|.++++|+++..+.. ..+.|+... +++|+++.+ |+|++++|.. .++.++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 5678999999999999999999999997777765443333 445576654 899999999 9999999987 777777
Q ss_pred cHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 115 NRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 115 ~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
.+.++.+++|.++||++++...+...+.+.++++|+.|+|+
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vda 139 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDV 139 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeC
Confidence 56788899999999999999999999999999999999985
No 57
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.47 E-value=1.6e-13 Score=126.07 Aligned_cols=131 Identities=11% Similarity=0.117 Sum_probs=91.8
Q ss_pred ccCCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCC--CChh-HhhcCCccc-CHHHHhccc
Q psy3240 23 CRGEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRS--KKPE-ADKRGAEHT-NIDDLCKQS 97 (274)
Q Consensus 23 ~~~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~--~~~~-a~~~g~~~~-sl~ell~~a 97 (274)
+.+.|.++.+...+ .....++|||||+|.||..+|+.|...|. ++++|+++. ...+ ..+.|+... ++.|++++|
T Consensus 6 ~~~~~~~~~~~~~~-~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~a 84 (312)
T 3qsg_A 6 HHSSGVDLGTENLY-FQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGEC 84 (312)
T ss_dssp --------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHC
T ss_pred ccccccccCccccc-ccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcC
Confidence 45667665443221 34456899999999999999999999998 777766542 2222 455677664 899999999
Q ss_pred CEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhh--hheeehh
Q psy3240 98 DFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADI--RVISISM 156 (274)
Q Consensus 98 DvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~--~i~~~D~ 156 (274)
|+|++++|.....+ .+ .+..+.+++++++||+++..+....++.+.+.++ |+.|+|.
T Consensus 85 DvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~ 143 (312)
T 3qsg_A 85 DVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAV 143 (312)
T ss_dssp SEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEec
Confidence 99999999766554 33 5677889999999999999999999999988887 7887774
No 58
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.46 E-value=1.5e-13 Score=124.19 Aligned_cols=113 Identities=14% Similarity=0.157 Sum_probs=93.2
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhcc--HHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLIN--RAR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~--~~~ 118 (274)
++|||||+|.||+.+|+.|...|.++++|+++..+.+ ..+.|+... +++|++++||+|++|+|....++.++. .+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 6899999999999999999999997777765544443 455677664 899999999999999997777777762 456
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 119 LESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
++.+++++++||+++..+...+.+.+.+++.|+.++|
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 7789999999999999999999999988876666665
No 59
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.44 E-value=3.1e-13 Score=121.73 Aligned_cols=146 Identities=17% Similarity=0.224 Sum_probs=98.6
Q ss_pred CCEEEEEccChHHHHHHHHHccC--CCeEEEEeCCCCChh-HhhcCCc---ccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPY--KVSKFLYTSRSKKPE-ADKRGAE---HTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~--G~~vv~~~~r~~~~~-a~~~g~~---~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
-++|||||+|.||+.+|+.|... |.++++++++..... ..+.|.. ..+++++++++|+|++++|... .+.++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~~ 84 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK-TIDFIK 84 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-HHHHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-HHHHHH
Confidence 36899999999999999999865 676666654433222 3345652 2378888999999999999643 355653
Q ss_pred HHHHhc-CCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecccCCccce
Q psy3240 116 RARLES-MKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTVGI 194 (274)
Q Consensus 116 ~~~l~~-mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 194 (274)
+..+. ++++++++|++++.....+.+.+.+. .++..|++.||++|.+
T Consensus 85 -~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~----------------------------~~~~~~v~~~P~~g~~--- 132 (290)
T 3b1f_A 85 -ILADLDLKEDVIITDAGSTKYEIVRAAEYYLK----------------------------DKPVQFVGSHPMAGSH--- 132 (290)
T ss_dssp -HHHTSCCCTTCEEECCCSCHHHHHHHHHHHHT----------------------------TSSCEEEEEEEC-------
T ss_pred -HHHhcCCCCCCEEEECCCCchHHHHHHHHhcc----------------------------ccCCEEEEeCCcCCCC---
Confidence 45667 89999999999887766666666332 1245689999999876
Q ss_pred eeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEEccCCCCC
Q psy3240 195 YFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVILPHIGSA 243 (274)
Q Consensus 195 ~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~tPH~~~~ 243 (274)
.+| |......++..++++++||.+..
T Consensus 133 ----------~~g-------------~~~a~~~l~~g~~~~~~~~~~~~ 158 (290)
T 3b1f_A 133 ----------KSG-------------AVAANVNLFENAYYIFSPSCLTK 158 (290)
T ss_dssp -----------CC-------------TTSCCTTTTTTSEEEEEECTTCC
T ss_pred ----------cch-------------HHHhhHHHhCCCeEEEecCCCCC
Confidence 222 22233467777778888876543
No 60
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.44 E-value=1.3e-13 Score=124.50 Aligned_cols=114 Identities=17% Similarity=0.162 Sum_probs=94.3
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhcc--HHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLIN--RAR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~--~~~ 118 (274)
++|||||+|.||..+|+.|...|.++++|+++..+.+ ..+.|+... +++|++++||+|++++|..+.++.++. .+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 5799999999999999999999998777765544444 445577664 899999999999999998767777662 456
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 119 LESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
++.++++.++||++++.+...+.+.+.+++.|+.|+|.
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~ 119 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEA 119 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEC
Confidence 77899999999999999999999999888878777774
No 61
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.42 E-value=1.5e-13 Score=125.30 Aligned_cols=115 Identities=16% Similarity=0.226 Sum_probs=92.0
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc--cCHHHHhcccCEEEEcCCCCcccHHhcc--
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH--TNIDDLCKQSDFIIITSALTPDTHHLIN-- 115 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~--~sl~ell~~aDvVil~lPlt~~T~~li~-- 115 (274)
..++|||||+|.||..+|+.|...|.++++|+++..+.+ ..+.|... .+++|+++.||+|++++|....++.++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~ 85 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGE 85 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhCh
Confidence 347899999999999999999999997777755433333 44556654 4889999999999999998767777663
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 116 RARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
++.++.+++++++||+++..+...+.+.+.+++.|+.++|
T Consensus 86 ~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 86 DGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 3566789999999999999998889998888776666665
No 62
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.41 E-value=2.9e-13 Score=122.77 Aligned_cols=114 Identities=12% Similarity=0.188 Sum_probs=93.1
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccH--HH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINR--AR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~--~~ 118 (274)
++|+|||+|.||+.+|+.|...|.++++|+++..+.+ ..+.|+... ++++++++||+|++|+|....++.++.. +.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 6899999999999999999999997777755433333 445577654 8999999999999999987777776642 56
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 119 LESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
++.+++++++||++++.+...+.+.+.+++.|+.++|+
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~ 121 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA 121 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 67899999999999999999889999888777777764
No 63
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.41 E-value=1.7e-12 Score=118.44 Aligned_cols=106 Identities=14% Similarity=0.198 Sum_probs=82.3
Q ss_pred CCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHHh
Q psy3240 42 NSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARLE 120 (274)
Q Consensus 42 gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~ 120 (274)
.++|+||| +|.||+++|+.|+..|.++++++++ .. .++.+++++||+|++++|.. .+..++. +..+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~-~~----------~~~~~~~~~aDvVilavp~~-~~~~vl~-~l~~ 87 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRE-DW----------AVAESILANADVVIVSVPIN-LTLETIE-RLKP 87 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTT-CG----------GGHHHHHTTCSEEEECSCGG-GHHHHHH-HHGG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC-cc----------cCHHHHhcCCCEEEEeCCHH-HHHHHHH-HHHh
Confidence 46899999 9999999999999999977777543 21 15678889999999999965 4677764 4566
Q ss_pred cCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecccCCc
Q psy3240 121 SMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDT 191 (274)
Q Consensus 121 ~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 191 (274)
.++++++++|+++.+....+++.+. .+..|++.||++|.+
T Consensus 88 ~l~~~~iv~~~~svk~~~~~~~~~~-------------------------------~~~~~v~~hP~~g~~ 127 (298)
T 2pv7_A 88 YLTENMLLADLTSVKREPLAKMLEV-------------------------------HTGAVLGLHPMFGAD 127 (298)
T ss_dssp GCCTTSEEEECCSCCHHHHHHHHHH-------------------------------CSSEEEEEEECSCTT
T ss_pred hcCCCcEEEECCCCCcHHHHHHHHh-------------------------------cCCCEEeeCCCCCCC
Confidence 7999999999998776555555541 124689999998876
No 64
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.37 E-value=1.2e-12 Score=120.87 Aligned_cols=112 Identities=13% Similarity=0.033 Sum_probs=91.3
Q ss_pred CCEEEEEccChHHHHHHHHHccCC-CeEEEEeCCCC-------Chh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYK-VSKFLYTSRSK-------KPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTH 111 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G-~~vv~~~~r~~-------~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~ 111 (274)
.++|||||+|.||..+|+.|...| .++++|+++.. ... ..+.|+ .. ++++++++||+|++++|.....+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~~e~~~~aDvVi~avp~~~~~~ 102 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDDVAGIACADVVLSLVVGAATKA 102 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESSGGGGGGCSEEEECCCGGGHHH
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCHHHHHhcCCEEEEecCCHHHHH
Confidence 378999999999999999999999 87777765431 111 234566 66 88999999999999999766655
Q ss_pred HhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 112 HLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
.+ .+..+.+++++++||+++..+...+.+.+.+++.|+.++|+
T Consensus 103 ~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~ 145 (317)
T 4ezb_A 103 VA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEG 145 (317)
T ss_dssp HH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEE
T ss_pred HH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence 44 67788899999999999999999999999888888887773
No 65
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.35 E-value=7.5e-12 Score=111.88 Aligned_cols=99 Identities=17% Similarity=0.196 Sum_probs=73.7
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCc---ccCHHHHhcccCEEEEcCCCCcccHHhccHHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAE---HTNIDDLCKQSDFIIITSALTPDTHHLINRAR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~---~~sl~ell~~aDvVil~lPlt~~T~~li~~~~ 118 (274)
++|+|||+|.||+.+|+.|...|.++++++++..+.. ..+.|.. ..+++++ +++|+|++++|. ..+..++. +.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~~-~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTLE-KL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHHH-HH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHHH-HH
Confidence 4799999999999999999999997666654433222 3445553 2378888 999999999994 35555653 55
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHh
Q psy3240 119 LESMKPGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~aL~~ 144 (274)
.+.+++++++||+++.+....+.+.+
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~ 103 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQ 103 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHH
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHH
Confidence 67789999999998877665555555
No 66
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.33 E-value=9e-13 Score=116.95 Aligned_cols=105 Identities=14% Similarity=0.199 Sum_probs=65.0
Q ss_pred CCCCccCCCCCCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCC--------------hh--HhhcCC-cc
Q psy3240 25 GEWKSWAPNFMCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKK--------------PE--ADKRGA-EH 87 (274)
Q Consensus 25 ~~w~~~~~~~~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~--------------~~--a~~~g~-~~ 87 (274)
+.|+.|.+......++.+++|||||+|.||+.+|+.|...|.++++|+++..+ .. ....+. ..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3dtt_A 2 GSDKIHHHHHHENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHL 81 (245)
T ss_dssp -----------------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEE
T ss_pred CcccccccccccccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceec
Confidence 45666655555678999999999999999999999999999987777655433 11 112233 33
Q ss_pred cCHHHHhcccCEEEEcCCCCcccHHhccHHH-HhcCCCCcEEEEcC
Q psy3240 88 TNIDDLCKQSDFIIITSALTPDTHHLINRAR-LESMKPGAILINTS 132 (274)
Q Consensus 88 ~sl~ell~~aDvVil~lPlt~~T~~li~~~~-l~~mk~gailINv~ 132 (274)
.++.|++++||+|++++|..... ..+. +. .+.+ +++++||++
T Consensus 82 ~~~~e~~~~aDvVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 82 AAFADVAAGAELVVNATEGASSI-AALT-AAGAENL-AGKILVDIA 124 (245)
T ss_dssp EEHHHHHHHCSEEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECC
T ss_pred cCHHHHHhcCCEEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECC
Confidence 48899999999999999965443 3332 22 2334 899999999
No 67
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.32 E-value=2.9e-12 Score=120.84 Aligned_cols=111 Identities=14% Similarity=0.205 Sum_probs=90.0
Q ss_pred CC-CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcccCHHHHhc-ccCEEEEcCCCCcccHHh
Q psy3240 37 GP-ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHTNIDDLCK-QSDFIIITSALTPDTHHL 113 (274)
Q Consensus 37 g~-~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~sl~ell~-~aDvVil~lPlt~~T~~l 113 (274)
|. +|.||+|+|+|+|+||+.+|++|+++|++++++|....+.. ....+++..+.++++. .||+++.| ++.++
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~-----A~~~~ 243 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPC-----AMGGV 243 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEEC-----SCSCC
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHh-----HHHhh
Confidence 55 79999999999999999999999999998775554322222 4456777778889888 89999853 57789
Q ss_pred ccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheee
Q psy3240 114 INRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 114 i~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
|+++.++.|| ..+++|.+++.++++++ .+.|+++|+.++
T Consensus 244 I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIlv~ 282 (355)
T 1c1d_A 244 ITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGILYA 282 (355)
T ss_dssp BCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCEEC
T ss_pred cCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEEEE
Confidence 9999999998 78999999999998777 577888777543
No 68
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.32 E-value=4.4e-12 Score=124.00 Aligned_cols=114 Identities=10% Similarity=0.197 Sum_probs=93.8
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhhc---CCc---ccCHHHHhc---ccCEEEEcCCCCcccH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKR---GAE---HTNIDDLCK---QSDFIIITSALTPDTH 111 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~---g~~---~~sl~ell~---~aDvVil~lPlt~~T~ 111 (274)
.++|||||+|.||+.+|++|...|.++++|+++..+.+ ..+. +.. ..+++|+++ .+|+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 36799999999999999999999998777765544333 2222 222 248888876 5999999999887888
Q ss_pred HhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 112 HLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
.++ .+.++.|++|.++||++++...+...+.+.++++|+.|+|+
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~ 127 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGS 127 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccC
Confidence 887 57888999999999999999999999999999999999885
No 69
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.30 E-value=4.6e-12 Score=123.54 Aligned_cols=117 Identities=12% Similarity=0.149 Sum_probs=93.1
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhhc----CCccc-CHHHHhcc---cCEEEEcCCCCcc
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKR----GAEHT-NIDDLCKQ---SDFIIITSALTPD 109 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~----g~~~~-sl~ell~~---aDvVil~lPlt~~ 109 (274)
.+..++|||||+|.||+.+|++|...|.++++|+++..+.+ ..+. |+... +++|+++. +|+|++++|....
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 91 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAG 91 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHH
Confidence 45677899999999999999999999997777655433333 2222 55543 88898877 9999999998888
Q ss_pred cHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 110 THHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 110 T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
++.++. +..+.+++|.++||++.|...+.+.+.+.+++.|+.++|+
T Consensus 92 v~~vl~-~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~ 137 (480)
T 2zyd_A 92 TDAAID-SLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGT 137 (480)
T ss_dssp HHHHHH-HHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCC
Confidence 888884 6778899999999999999888888888888888888774
No 70
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.29 E-value=3.6e-12 Score=121.24 Aligned_cols=124 Identities=18% Similarity=0.246 Sum_probs=95.0
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc--------------------------CHH
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT--------------------------NID 91 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~--------------------------sl~ 91 (274)
.+.+++|+|||+|.||..+|+.++++|+++++++++..+.+ +.+.|..+. +++
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 47899999999999999999999999998777776665544 455555432 467
Q ss_pred HHhcccCEEEEcC--CCCcccHHhccHHHHhcCCCCcEEEEcC--CCchhcHHHHHhhhhhhhheeehhhccccccccee
Q psy3240 92 DLCKQSDFIIITS--ALTPDTHHLINRARLESMKPGAILINTS--RGQLVDQEALIDFIADIRVISISMVTNEKHLHRVF 167 (274)
Q Consensus 92 ell~~aDvVil~l--Plt~~T~~li~~~~l~~mk~gailINv~--RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~ 167 (274)
++++++|+|+.++ |. ..+..+++++.++.||||+++||+| +|+.+. ++++
T Consensus 261 e~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e------------------------~t~~- 314 (381)
T 3p2y_A 261 DAITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNCE------------------------LTEP- 314 (381)
T ss_dssp HHHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT------------------------TCCT-
T ss_pred HHHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCccc------------------------cccC-
Confidence 8999999999886 53 2356789999999999999999998 444322 1122
Q ss_pred ecCCCcccCccceeeeeecccCCc
Q psy3240 168 TLGDSFHKGHVSAFIFIHMIMGDT 191 (274)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~i~~~~ 191 (274)
++.+..++..+|++.++||.-
T Consensus 315 ---~~~~~~~gV~~~~v~nlP~~v 335 (381)
T 3p2y_A 315 ---GRTIVHHGVTITSPLNLPATM 335 (381)
T ss_dssp ---TCEEEETTEEEECCSCTGGGS
T ss_pred ---CCeEEECCEEEEeeCCCchhh
Confidence 123566889999999999874
No 71
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.29 E-value=4.2e-12 Score=114.09 Aligned_cols=113 Identities=13% Similarity=0.180 Sum_probs=90.3
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccH--HH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINR--AR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~--~~ 118 (274)
++|+|||+|.||+.+|+.|...|.++++++ +..+.. ..+.|+... +++++++++|+|++++|....++.++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999877776 544433 344466543 7899999999999999976666666642 44
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 119 LESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
.+.+++++++|+++++...+.+.+.+.+.+.++.+++.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~ 120 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLDA 120 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 56789999999999998888888999888777777764
No 72
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.28 E-value=4.9e-12 Score=114.00 Aligned_cols=114 Identities=21% Similarity=0.291 Sum_probs=90.7
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhcc--HHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLIN--RAR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~--~~~ 118 (274)
++|+|||+|.||+.+|+.|...|.++++++++..+.. ..+.|+... +++++++.+|+|++++|....++.++. .+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 5899999999999999999999997666654433323 344466554 888999999999999997767777763 345
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 119 LESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
.+.+++++++||++++...+.+.+.+.+.+.|+.++|.
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~ 123 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDA 123 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 57789999999999999888888999888878887774
No 73
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.26 E-value=6.8e-12 Score=113.19 Aligned_cols=113 Identities=16% Similarity=0.249 Sum_probs=89.9
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhcc--HHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLIN--RAR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~--~~~ 118 (274)
++|+|||+|.||+.+|+.|...|.++++++++..+.. ..+.|+... +++++++++|+|++++|....++.++. .+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 6899999999999999999999997666654333222 333466544 788999999999999998777777774 355
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 119 LESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
.+.+++++++|++++|...+.+.+.+.+.+.++.+++
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~ 121 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD 121 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 6778999999999999877888888888877777776
No 74
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.26 E-value=1.1e-11 Score=121.42 Aligned_cols=114 Identities=11% Similarity=0.220 Sum_probs=93.1
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhh-----cCCccc-CHHHHhcc---cCEEEEcCCCCcccH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADK-----RGAEHT-NIDDLCKQ---SDFIIITSALTPDTH 111 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~-----~g~~~~-sl~ell~~---aDvVil~lPlt~~T~ 111 (274)
..+|||||+|.||+.+|+.|...|.++++|+++..+.+ ..+ .|+... +++++++. +|+|++++|....++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 45799999999999999999999997777765544333 333 355443 88898876 999999999877888
Q ss_pred HhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 112 HLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
.++ .+..+.+++|.++||++.+...+.+.+.+.+++.|+.++|+
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~ 133 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGS 133 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCC
Confidence 888 46778899999999999999888888989888888888875
No 75
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.26 E-value=8.9e-13 Score=122.77 Aligned_cols=94 Identities=18% Similarity=0.201 Sum_probs=75.1
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCC-hh-HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKK-PE-ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~-~~-a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
..|.+++|+|||+|.||+++|+.|+..|+++++++++... .. +.+.|+...++++++++||+|++++|... ...++.
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~-~~~v~~ 90 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEF-QGRLYK 90 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHH-HHHHHH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHH-HHHHHH
Confidence 3578899999999999999999999999977777665443 22 45567765588899999999999999654 366665
Q ss_pred HHHHhcCCCCcEEEEcC
Q psy3240 116 RARLESMKPGAILINTS 132 (274)
Q Consensus 116 ~~~l~~mk~gailINv~ 132 (274)
++..+.+++++++++++
T Consensus 91 ~~i~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH 107 (338)
T ss_dssp HHTGGGCCTTCEEEESC
T ss_pred HHHHhhCCCCCEEEEcC
Confidence 46667899999999885
No 76
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.25 E-value=8.7e-12 Score=111.50 Aligned_cols=112 Identities=12% Similarity=0.199 Sum_probs=87.4
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARLES 121 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~ 121 (274)
++|+|||+|.||+.+|+.|.. |.++++++++..+.. ..+.|+...+++++++.+|+|++++|....++.++ ++..+.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~~ 79 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVA-EALYPY 79 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHH-HHHTTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHH-HHHHhh
Confidence 479999999999999999999 997766655433332 33335544347788889999999999766677666 456677
Q ss_pred CCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 122 MKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 122 mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
+++++++|+++++...+.+.+.+.+++.++.++++
T Consensus 80 l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~ 114 (289)
T 2cvz_A 80 LREGTYWVDATSGEPEASRRLAERLREKGVTYLDA 114 (289)
T ss_dssp CCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 89999999999998888888998888777777764
No 77
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.25 E-value=9.7e-12 Score=111.91 Aligned_cols=113 Identities=17% Similarity=0.264 Sum_probs=86.9
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccH--HH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINR--AR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~--~~ 118 (274)
++|+|||+|.||+.+|+.|...|.++++|+++..+.. ..+.|+... +++++++++|+|++++|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 4799999999999999999999997776655433333 344566554 8899999999999999987777776643 24
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 119 LESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
++.+++++++|++++..+.+.+.+.+.+.+.++.++|
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~ 117 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMD 117 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 5678999999998888877777777777666666665
No 78
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.25 E-value=2.6e-12 Score=122.46 Aligned_cols=139 Identities=19% Similarity=0.318 Sum_probs=97.9
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCCh--h-HhhcCCcc---cCHHHHhcccCEEEEcCCCCcccHH
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKP--E-ADKRGAEH---TNIDDLCKQSDFIIITSALTPDTHH 112 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~--~-a~~~g~~~---~sl~ell~~aDvVil~lPlt~~T~~ 112 (274)
++.|++|+|||+|.||+.+++.|+.+|++.+.+.+++... . +...|+.. .++.++++.+|+|+.|+|.+ ..
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~---~~ 240 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAP---HP 240 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSS---SC
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCC---Cc
Confidence 5899999999999999999999999999444444444322 2 44556543 36778889999999998754 34
Q ss_pred hccHHHHhc--CC----CCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeec
Q psy3240 113 LINRARLES--MK----PGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHM 186 (274)
Q Consensus 113 li~~~~l~~--mk----~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (274)
+++++.++. || ++.++||+
T Consensus 241 ~~~~~~l~~~~lk~r~~~~~v~vdi------------------------------------------------------- 265 (404)
T 1gpj_A 241 VIHVDDVREALRKRDRRSPILIIDI------------------------------------------------------- 265 (404)
T ss_dssp CBCHHHHHHHHHHCSSCCCEEEEEC-------------------------------------------------------
T ss_pred eecHHHHHHHHHhccCCCCEEEEEc-------------------------------------------------------
Confidence 455555554 22 33344443
Q ss_pred ccCCccceeeehhhhHHHhcCceeEEEeccCCCCCCCCCCccccCCcEEE--ccCCCCCcHHHHH----------HHHHH
Q psy3240 187 IMGDTVGIYFIFSASDVLKAKKIRGAGLDVMYPEPLPLDSPLLQLDNCVI--LPHIGSAQIETRQ----------EMARI 254 (274)
Q Consensus 187 i~~~~~~~~~~~~~~~~l~~g~i~~a~lDv~~~ep~~~~~~l~~~~nvi~--tPH~~~~t~~~~~----------~~~~~ 254 (274)
.+ |.+.+++++.+|||.+ +||+++.+.++.+ .+...
T Consensus 266 ------------------------------a~--P~~i~~~l~~l~~v~l~d~d~l~~~~~~~~~~r~~~~~~~~~li~q 313 (404)
T 1gpj_A 266 ------------------------------AN--PRDVEEGVENIEDVEVRTIDDLRVIARENLERRRKEIPKVEKLIEE 313 (404)
T ss_dssp ------------------------------CS--SCSBCTTGGGSTTEEEEEHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred ------------------------------cC--CCCCCccccccCCeEEEeHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 4445678999999999 9999998887654 56666
Q ss_pred HHHHHHHHHcCCC
Q psy3240 255 TAQNIINTFHNKP 267 (274)
Q Consensus 255 ~~~ni~~~~~g~~ 267 (274)
.++++..|+.+++
T Consensus 314 ~~~~f~~w~~~~~ 326 (404)
T 1gpj_A 314 ELSTVEEELEKLK 326 (404)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc
Confidence 7778888876543
No 79
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.25 E-value=1.3e-11 Score=117.74 Aligned_cols=100 Identities=22% Similarity=0.337 Sum_probs=80.3
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc----------------------------C
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT----------------------------N 89 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~----------------------------s 89 (274)
++.|++|+|+|+|.||..+++.++++|+++++++.+..+.. +...|.... +
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 58899999999999999999999999997666665554433 455565533 2
Q ss_pred HHHHhcccCEEEEc--CCCCcccHHhccHHHHhcCCCCcEEEEcC--CCchhcH
Q psy3240 90 IDDLCKQSDFIIIT--SALTPDTHHLINRARLESMKPGAILINTS--RGQLVDQ 139 (274)
Q Consensus 90 l~ell~~aDvVil~--lPlt~~T~~li~~~~l~~mk~gailINv~--RG~iVde 139 (274)
++++++.+|+|+.+ +|. ..+..+++++.++.||+|+++||+| ||+.+++
T Consensus 249 l~e~~~~aDvVI~~~~~pg-~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPG-KPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHHHHHHCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHHhCCCCEEEECCccCC-CCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 67788899999999 553 2356788999999999999999999 8887765
No 80
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.22 E-value=2e-11 Score=111.27 Aligned_cols=114 Identities=14% Similarity=0.226 Sum_probs=89.1
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccH--HH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINR--AR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~--~~ 118 (274)
++|+|||+|.||+.+|+.|...|.++++++++..+.. ..+.|+... +++++++++|+|++++|....++.++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6899999999999999999999997777765544333 344566544 7889999999999999976667666643 23
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 119 LESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
++.+++++++||++++.....+.+.+.+...++.++++
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~ 148 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEA 148 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEc
Confidence 56789999999999988777888888777666666663
No 81
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.21 E-value=7.9e-11 Score=106.47 Aligned_cols=100 Identities=17% Similarity=0.163 Sum_probs=75.0
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhhc-----------C--------------Ccc-cCHHHHhc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKR-----------G--------------AEH-TNIDDLCK 95 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~-----------g--------------~~~-~sl~ell~ 95 (274)
++|+|||+|.||+.+|+.+...|+++++|+.+....+ ..+. + +.. .+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 7999999999999999999999998777765443322 2111 1 222 37888999
Q ss_pred ccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHh
Q psy3240 96 QSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 96 ~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~ 144 (274)
+||+|+.++|.+.+.+..+-++..+.+++++++++.+++- ...++.+
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~--~~~~la~ 131 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTL--LPSDLVG 131 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHH
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCC--CHHHHHh
Confidence 9999999999877677766677888899999999655443 3455555
No 82
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.18 E-value=3.7e-11 Score=115.06 Aligned_cols=124 Identities=19% Similarity=0.281 Sum_probs=94.3
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc------------------------------
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH------------------------------ 87 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~------------------------------ 87 (274)
.+.+.+|+|+|+|.||..+|+.++++|++++++|.+..+.+ +.+.|..+
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 47899999999999999999999999998777777665444 44455532
Q ss_pred cCHHHHhcccCEEEEcC--CCCcccHHhccHHHHhcCCCCcEEEEcC--CCchhcHHHHHhhhhhhhheeehhhcccccc
Q psy3240 88 TNIDDLCKQSDFIIITS--ALTPDTHHLINRARLESMKPGAILINTS--RGQLVDQEALIDFIADIRVISISMVTNEKHL 163 (274)
Q Consensus 88 ~sl~ell~~aDvVil~l--Plt~~T~~li~~~~l~~mk~gailINv~--RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~ 163 (274)
.++++++++||+|+.++ |.. ....+++++.++.||||+++||+| +|+.++..
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t----------------------- 322 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGA----------------------- 322 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTC-----------------------
T ss_pred hHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCcccc-----------------------
Confidence 14678899999999885 532 456788999999999999999998 55543321
Q ss_pred cceeecCCCcccCccceeeeeecccCCc
Q psy3240 164 HRVFTLGDSFHKGHVSAFIFIHMIMGDT 191 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 191 (274)
++ ++.| ..++..+|++.++||.-
T Consensus 323 -~~---~~~~-~~~GV~~~gv~nlP~~v 345 (405)
T 4dio_A 323 -EA---GKVT-EVGGVRIVGHLNVAGRI 345 (405)
T ss_dssp -CT---TEEE-EETTEEEEECSSGGGGG
T ss_pred -CC---CCeE-EECCEEEEEeCCCCccC
Confidence 11 1123 34788999999999973
No 83
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.17 E-value=7.6e-11 Score=111.47 Aligned_cols=99 Identities=20% Similarity=0.308 Sum_probs=78.2
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc---C------------------------
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT---N------------------------ 89 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~---s------------------------ 89 (274)
.++.|++|+|+|+|.||+.+++.++++|+++++++.+..+.+ +...|.... .
T Consensus 168 ~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~ 247 (384)
T 1l7d_A 168 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 247 (384)
T ss_dssp EEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence 378999999999999999999999999997666665555444 445665432 1
Q ss_pred ---HHHHhcccCEEEEcC--CCCcccHHhccHHHHhcCCCCcEEEEcC--CCchh
Q psy3240 90 ---IDDLCKQSDFIIITS--ALTPDTHHLINRARLESMKPGAILINTS--RGQLV 137 (274)
Q Consensus 90 ---l~ell~~aDvVil~l--Plt~~T~~li~~~~l~~mk~gailINv~--RG~iV 137 (274)
++++++.+|+|+.++ |..+ +.++++++.++.||+|+++||++ ||+.+
T Consensus 248 ~~~l~~~~~~aDvVi~~~~~pg~~-~~~li~~~~l~~mk~g~vivdva~~~gg~~ 301 (384)
T 1l7d_A 248 AEAVLKELVKTDIAITTALIPGKP-APVLITEEMVTKMKPGSVIIDLAVEAGGNC 301 (384)
T ss_dssp HHHHHHHHTTCSEEEECCCCTTSC-CCCCSCHHHHTTSCTTCEEEETTGGGTCSS
T ss_pred HHHHHHHhCCCCEEEECCccCCCC-CCeeeCHHHHhcCCCCCEEEEEecCCCCCe
Confidence 677889999999888 4432 45678899999999999999999 77654
No 84
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.17 E-value=1.4e-11 Score=120.48 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=82.2
Q ss_pred hccCCCCccCCCCCCCCCCCC-CEEEEEccChHHHHHHHHHccC------CCeEEEEeCCCCChh--HhhcCCcc-----
Q psy3240 22 SCRGEWKSWAPNFMCGPALQN-STVGIVGCGRIGLSVLEKLIPY------KVSKFLYTSRSKKPE--ADKRGAEH----- 87 (274)
Q Consensus 22 ~~~~~w~~~~~~~~~g~~L~g-ktVGIIGlG~IG~~iA~~L~~~------G~~vv~~~~r~~~~~--a~~~g~~~----- 87 (274)
-.+|.|... ...+.|+| ++|||||+|+||.++|+.|+.. |+++++++++..+.. +.+.|+..
T Consensus 37 ~~~~~w~~~----~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta 112 (525)
T 3fr7_A 37 VRGGRNLFP----LLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTL 112 (525)
T ss_dssp EECCGGGGG----GHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCE
T ss_pred Eeccccccc----cChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCC
Confidence 345666531 12367999 9999999999999999999987 997776766544332 56678764
Q ss_pred cCHHHHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCch
Q psy3240 88 TNIDDLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQL 136 (274)
Q Consensus 88 ~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~i 136 (274)
.++.|++++||+|++++|..... .++. +.++.||+|++| -.+.|-.
T Consensus 113 ~s~aEAa~~ADVVILaVP~~~~~-eVl~-eI~p~LK~GaIL-s~AaGf~ 158 (525)
T 3fr7_A 113 GDIWETVSGSDLVLLLISDAAQA-DNYE-KIFSHMKPNSIL-GLSHGFL 158 (525)
T ss_dssp EEHHHHHHHCSEEEECSCHHHHH-HHHH-HHHHHSCTTCEE-EESSSHH
T ss_pred CCHHHHHhcCCEEEECCChHHHH-HHHH-HHHHhcCCCCeE-EEeCCCC
Confidence 48999999999999999986553 4665 688999999995 5556643
No 85
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.16 E-value=4.4e-11 Score=116.22 Aligned_cols=113 Identities=18% Similarity=0.227 Sum_probs=89.5
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhhc----CCcc-cCHHHHhcc---cCEEEEcCCCCcccHHh
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKR----GAEH-TNIDDLCKQ---SDFIIITSALTPDTHHL 113 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~----g~~~-~sl~ell~~---aDvVil~lPlt~~T~~l 113 (274)
++|||||+|.||+.+|+.|...|.++.+|+++..+.+ ..+. ++.. .+++++++. +|+|++++|....++.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 5799999999999999999999997766654433322 2222 5544 388898876 99999999987778877
Q ss_pred ccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 114 INRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 114 i~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
+ .+..+.+++|.++|+++.+...+.+.+.+.+++.|+.++++
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~ 127 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGT 127 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEE
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECC
Confidence 7 46677899999999999998888888888887777777764
No 86
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.16 E-value=8.2e-11 Score=114.49 Aligned_cols=113 Identities=10% Similarity=0.168 Sum_probs=89.8
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhh-----cCCcc-cCHHHHhc---ccCEEEEcCCCCcccHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADK-----RGAEH-TNIDDLCK---QSDFIIITSALTPDTHH 112 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~-----~g~~~-~sl~ell~---~aDvVil~lPlt~~T~~ 112 (274)
++|||||+|.||+.+|+.|...|.++.+|+++..+.. ..+ .++.. .+++++++ .+|+|++++|....++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 4799999999999999999999997776665443333 333 45544 37888874 89999999998777888
Q ss_pred hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 113 LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
++. +..+.+++|.++|+++.|...+...+.+.+++.|+.++++
T Consensus 83 vl~-~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~ 125 (482)
T 2pgd_A 83 FIE-KLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGS 125 (482)
T ss_dssp HHH-HHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCC
Confidence 774 5677899999999999998888888888888777777764
No 87
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.14 E-value=6.8e-11 Score=104.78 Aligned_cols=101 Identities=13% Similarity=0.133 Sum_probs=77.2
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh----HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE----ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRAR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~----a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~ 118 (274)
++|+|||+|.||+.+|+.|...|.+++++ ++..... ..+.|+. .++++++++||+|++++|.....+.+ .+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~-~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~ 76 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTS-LEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAA--RRA 76 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEC-CTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHH--HHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEe-CCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHH--HHH
Confidence 47999999999999999999999976664 4421211 2334666 67888999999999999976655554 456
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHhhhhhh
Q psy3240 119 LESMKPGAILINTSRGQLVDQEALIDFIADI 149 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~aL~~~L~~~ 149 (274)
.+.+++ ++||++++.+.+.+.+.+.+.+.
T Consensus 77 ~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 77 GRHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp HTTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HHhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 677776 99999988887788888866543
No 88
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.10 E-value=1.3e-10 Score=113.12 Aligned_cols=113 Identities=16% Similarity=0.229 Sum_probs=88.5
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-H-hhcC-------Ccc-cCHHHHhcc---cCEEEEcCCCCcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-A-DKRG-------AEH-TNIDDLCKQ---SDFIIITSALTPD 109 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a-~~~g-------~~~-~sl~ell~~---aDvVil~lPlt~~ 109 (274)
++|||||+|.||+.+|+.|...|.++.+|+++..+.+ . ...| +.. .+++++++. +|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 4799999999999999999999997766654433322 2 2224 333 378888874 9999999998777
Q ss_pred cHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 110 THHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 110 T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
++.++ ++..+.+++|.++|+++.|...+.+.+.+.+++.|+.++++
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~ 127 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGM 127 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEe
Confidence 78777 45667789999999999998888888888888878887764
No 89
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.10 E-value=6.4e-11 Score=108.84 Aligned_cols=93 Identities=23% Similarity=0.241 Sum_probs=69.5
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhhc-------CCccc-CHHHHhcccCEEEEcCCCCccc
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKR-------GAEHT-NIDDLCKQSDFIIITSALTPDT 110 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~-------g~~~~-sl~ell~~aDvVil~lPlt~~T 110 (274)
-+.|+|||||+|.||..+|+.+. .|.++++|+.+....+ +.+. ++... ++++ +++||+|+.++|...+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 46799999999999999999999 9998777766544333 3332 34333 6766 89999999999998887
Q ss_pred HHhccHHHHhcCCCCcEE-EEcCCCch
Q psy3240 111 HHLINRARLESMKPGAIL-INTSRGQL 136 (274)
Q Consensus 111 ~~li~~~~l~~mk~gail-INv~RG~i 136 (274)
+..+-.+ ++.+ +++++ .|+|+.++
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti~~ 112 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVISV 112 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSSCH
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCcCH
Confidence 7766444 5667 99998 48888554
No 90
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.09 E-value=1.9e-10 Score=102.84 Aligned_cols=112 Identities=9% Similarity=0.140 Sum_probs=81.3
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh--HhhcCCcccCHHHHhcccCEEEEcCCCCc--ccHH
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRGAEHTNIDDLCKQSDFIIITSALTP--DTHH 112 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g~~~~sl~ell~~aDvVil~lPlt~--~T~~ 112 (274)
|.+++| +++|||+|.||+++|+.|...|+++.+++++..+.. +...+....+++++ +++|+|++++|... .+..
T Consensus 112 ~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~~~~~~~~ 189 (263)
T 2d5c_A 112 GIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKA-REARLLVNATRVGLEDPSAS 189 (263)
T ss_dssp TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCEECCGGGG-GGCSEEEECSSTTTTCTTCC
T ss_pred CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccchhhHhhc-cCCCEEEEccCCCCCCCCCC
Confidence 457899 999999999999999999999985555544332222 23345444478888 99999999999862 2323
Q ss_pred hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 113 LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
.+. .+.+++|++++|++.+. .+. .+.+.++++|+.++|
T Consensus 190 ~l~---~~~l~~g~~viD~~~~p-~~t-~l~~~a~~~g~~~v~ 227 (263)
T 2d5c_A 190 PLP---AELFPEEGAAVDLVYRP-LWT-RFLREAKAKGLKVQT 227 (263)
T ss_dssp SSC---GGGSCSSSEEEESCCSS-SSC-HHHHHHHHTTCEEEC
T ss_pred CCC---HHHcCCCCEEEEeecCC-ccc-HHHHHHHHCcCEEEC
Confidence 343 46689999999999874 343 477777777777665
No 91
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.05 E-value=2.8e-10 Score=111.19 Aligned_cols=95 Identities=16% Similarity=0.226 Sum_probs=78.4
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
+..|.||+++|+|+|.||+.+|++|+++|+++++++.+..+.. +...++...+++++++.+|+|+.+. .+.++++
T Consensus 260 g~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~at----G~~~vl~ 335 (488)
T 3ond_A 260 DVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTT----GNKDIIM 335 (488)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECS----SCSCSBC
T ss_pred CCcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCC----CChhhhh
Confidence 4679999999999999999999999999997666654433222 4556776678999999999999754 4567888
Q ss_pred HHHHhcCCCCcEEEEcCCCc
Q psy3240 116 RARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~ 135 (274)
.+.++.||++++++|+|++.
T Consensus 336 ~e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 336 LDHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp HHHHTTSCTTEEEEESSSTT
T ss_pred HHHHHhcCCCeEEEEcCCCC
Confidence 88999999999999999973
No 92
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.05 E-value=2e-10 Score=103.53 Aligned_cols=91 Identities=15% Similarity=0.251 Sum_probs=70.4
Q ss_pred CEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHHh
Q psy3240 43 STVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARLE 120 (274)
Q Consensus 43 ktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~ 120 (274)
++|+|||+ |.||+.+|+.|...|.++++++++..... ..+.|+...++.+++++||+|++++|... ++.++ ++..+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~~ 89 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNI-IEKVA-EDIVP 89 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHH-HHHHH-HHHGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchH-HHHHH-HHHHH
Confidence 68999999 99999999999999997666654433222 33456555577888999999999999644 56666 45667
Q ss_pred cCCCCcEEEEcCCCc
Q psy3240 121 SMKPGAILINTSRGQ 135 (274)
Q Consensus 121 ~mk~gailINv~RG~ 135 (274)
.+++++++|+++.|.
T Consensus 90 ~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 90 RVRPGTIVLILDAAA 104 (286)
T ss_dssp GSCTTCEEEESCSHH
T ss_pred hCCCCCEEEECCCCc
Confidence 789999999988876
No 93
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.05 E-value=5.6e-10 Score=103.50 Aligned_cols=101 Identities=19% Similarity=0.115 Sum_probs=75.0
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hh-----------hcC--------------Ccc-cCHHHHh
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-AD-----------KRG--------------AEH-TNIDDLC 94 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~-----------~~g--------------~~~-~sl~ell 94 (274)
-++|+|||+|.||.++|..+...|.++++|+.+..... .. +.| +.. .++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 47899999999999999999999998888876544322 21 123 122 3889999
Q ss_pred cccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHh
Q psy3240 95 KQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 95 ~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~ 144 (274)
+.||+|+.++|...+.+..+-.+..+.++++++|++.+++ +....+.+
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~ 133 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFT 133 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHT
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHH
Confidence 9999999999987666655556677889999999866555 33455665
No 94
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=99.04 E-value=2.7e-10 Score=107.65 Aligned_cols=113 Identities=13% Similarity=0.240 Sum_probs=85.2
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh--HhhcCCcccCHHHHhc-ccCEEEEcCCCCcccHHhcc
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRGAEHTNIDDLCK-QSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g~~~~sl~ell~-~aDvVil~lPlt~~T~~li~ 115 (274)
+|.||+|+|+|+|+||+.+|++|..+|++++++|....+.. +.+.+++..+.++++. +||+++.|. +.++++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a-----~~~~I~ 244 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-----LGAVLN 244 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-----CSCCBS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc-----hHHHhC
Confidence 79999999999999999999999999998775543322222 3344777777788776 899999874 455788
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheee-hhhc
Q psy3240 116 RARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISI-SMVT 158 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~-D~~~ 158 (274)
.+.++.|+ ..++++.+++.+.+++ ..+.|+++|+.++ |...
T Consensus 245 ~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi~~~Pd~~~ 286 (364)
T 1leh_A 245 DFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGIVYAPDYVI 286 (364)
T ss_dssp TTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTCEECCHHHH
T ss_pred HHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCCEEecceee
Confidence 77788884 5789999999887755 5567888887554 4444
No 95
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.02 E-value=2.8e-10 Score=102.76 Aligned_cols=111 Identities=15% Similarity=0.270 Sum_probs=79.6
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCCh-h--HhhcCCccc-CHHHHhcccCEEEEcCCCCcc--c
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKP-E--ADKRGAEHT-NIDDLCKQSDFIIITSALTPD--T 110 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~-~--a~~~g~~~~-sl~ell~~aDvVil~lPlt~~--T 110 (274)
|.++.|++++|||.|.||+++|+.|...|++++++ +|+... . +...++... +++++++++|+|++++|.... +
T Consensus 124 ~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~-~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~ 202 (275)
T 2hk9_A 124 IPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLW-NRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDED 202 (275)
T ss_dssp CTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEE-CSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTC
T ss_pred CCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEE-ECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCC
Confidence 45788999999999999999999999999954444 444322 2 223344444 788889999999999997642 2
Q ss_pred HHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 111 HHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 111 ~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
...++ ++.++++++++|++. ....+.+..++.|+.++|
T Consensus 203 ~~~i~---~~~l~~g~~viDv~~----~~t~ll~~a~~~g~~~v~ 240 (275)
T 2hk9_A 203 PEIFN---YDLIKKDHVVVDIIY----KETKLLKKAKEKGAKLLD 240 (275)
T ss_dssp CCSSC---GGGCCTTSEEEESSS----SCCHHHHHHHHTTCEEEC
T ss_pred CCCCC---HHHcCCCCEEEEcCC----ChHHHHHHHHHCcCEEEC
Confidence 22343 456899999999998 234456656666766665
No 96
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.55 E-value=4.1e-11 Score=103.90 Aligned_cols=94 Identities=23% Similarity=0.274 Sum_probs=72.6
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHH
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARL 119 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l 119 (274)
+.+++|+|||+|+||+.+|+.|...|.++++++++.........++...+++++++++|+|++++|.. .++.++ + +
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~-~~~~v~--~-l 92 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHRE-HYDFLA--E-L 92 (201)
Confidence 77889999999999999999999999876666554331112334555457888999999999999974 566666 2 4
Q ss_pred hcCCCCcEEEEcCCCchh
Q psy3240 120 ESMKPGAILINTSRGQLV 137 (274)
Q Consensus 120 ~~mk~gailINv~RG~iV 137 (274)
..+++++++||+++|-..
T Consensus 93 ~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 93 ADSLKGRVLIDVSNNQKM 110 (201)
Confidence 456789999999999864
No 97
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.97 E-value=4.5e-10 Score=99.73 Aligned_cols=100 Identities=14% Similarity=0.285 Sum_probs=73.6
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCe-EEEEeCCCCChh--HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHH
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVS-KFLYTSRSKKPE--ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHH 112 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~-vv~~~~r~~~~~--a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~ 112 (274)
.+.+.+++|+|||+|.||+.+|+.|...|.+ +.+++++..+.. ....++... +++++++++|+|++++|.. ..+.
T Consensus 5 ~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~ 83 (266)
T 3d1l_A 5 KRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAE 83 (266)
T ss_dssp --CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHH
T ss_pred hcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHH
Confidence 3556678999999999999999999988987 445544322222 223366543 7889999999999999965 4455
Q ss_pred hccHHHHhcCCCCcEEEEcCCCchhc
Q psy3240 113 LINRARLESMKPGAILINTSRGQLVD 138 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~iVd 138 (274)
++ ++..+.+++++++|++++|...+
T Consensus 84 v~-~~l~~~~~~~~ivv~~s~~~~~~ 108 (266)
T 3d1l_A 84 LL-QGIVEGKREEALMVHTAGSIPMN 108 (266)
T ss_dssp HH-HHHHTTCCTTCEEEECCTTSCGG
T ss_pred HH-HHHHhhcCCCcEEEECCCCCchH
Confidence 55 35566788999999999987654
No 98
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.94 E-value=2.4e-09 Score=104.07 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=71.1
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCCh---------hHhhcCC-------------cc-cCHHHHhcccCE
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKP---------EADKRGA-------------EH-TNIDDLCKQSDF 99 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~---------~a~~~g~-------------~~-~sl~ell~~aDv 99 (274)
++|+|||+|.||..+|..+...|.++++++.+..+. ...+.|. .. .+++ .+++||+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDl 133 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDL 133 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCE
Confidence 799999999999999999999999888877654411 0112232 12 2564 6899999
Q ss_pred EEEcCCCCcccHHhccHHHHhcCCCCcEEE-EcCCCchhcHHHHHh
Q psy3240 100 IIITSALTPDTHHLINRARLESMKPGAILI-NTSRGQLVDQEALID 144 (274)
Q Consensus 100 Vil~lPlt~~T~~li~~~~l~~mk~gailI-Nv~RG~iVde~aL~~ 144 (274)
|+.++|...+.+..+-++..+.++++++|+ |+|. +....+.+
T Consensus 134 VIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs---l~i~~ia~ 176 (460)
T 3k6j_A 134 IVESVIEDMKLKKELFANLENICKSTCIFGTNTSS---LDLNEISS 176 (460)
T ss_dssp EEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS---SCHHHHHT
T ss_pred EEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC---hhHHHHHH
Confidence 999999877766655567778899999996 5554 33355555
No 99
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.93 E-value=2.1e-09 Score=95.87 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=73.4
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHHh
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARLE 120 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~ 120 (274)
.-++|+|||+|+||.++|+.|+..|.++++|+++ ++ ++.|| ++++|.. ....++ .+..+
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~----------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~ 63 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP----------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSA 63 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG----------------GG-GGGCS--EEEECSS-CHHHHH-HHHHT
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH----------------HH-hccCC--EEEEcHH-HHHHHH-HHHHH
Confidence 3468999999999999999999999976666542 12 56799 8888975 666666 45667
Q ss_pred cCCCCcEEEEcC-CCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeecccCCcccee
Q psy3240 121 SMKPGAILINTS-RGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHMIMGDTVGIY 195 (274)
Q Consensus 121 ~mk~gailINv~-RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 195 (274)
.+++|+++++++ +-+.-..+.+.+ ++..|+..||+.|..-+++
T Consensus 64 ~l~~g~ivvd~sgs~~~~vl~~~~~--------------------------------~g~~fvg~HPm~g~~~~i~ 107 (232)
T 3dfu_A 64 FARRGQMFLHTSLTHGITVMDPLET--------------------------------SGGIVMSAHPIGQDRWVAS 107 (232)
T ss_dssp TCCTTCEEEECCSSCCGGGGHHHHH--------------------------------TTCEEEEEEEEETTEEEEE
T ss_pred hcCCCCEEEEECCcCHHHHHHHHHh--------------------------------CCCcEEEeeeCCCCceeee
Confidence 789999999974 322222222222 3467999999998764444
No 100
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.91 E-value=2.8e-09 Score=103.18 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=76.3
Q ss_pred CEEEEEccChHHHHHHHHHccC--CCeEEEEeCCCCChhHhh--------------------cCCcc-cCHHHHhcccCE
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY--KVSKFLYTSRSKKPEADK--------------------RGAEH-TNIDDLCKQSDF 99 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~--G~~vv~~~~r~~~~~a~~--------------------~g~~~-~sl~ell~~aDv 99 (274)
++|+|||+|.||..+|..|... |.++++++.+..+.+... .++.. .++++.++.||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999877 787777765433222110 12333 377888999999
Q ss_pred EEEcCCCCcccHH-----------hc--cHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhh
Q psy3240 100 IIITSALTPDTHH-----------LI--NRARLESMKPGAILINTSRGQLVDQEALIDFIAD 148 (274)
Q Consensus 100 Vil~lPlt~~T~~-----------li--~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~ 148 (274)
|++|+|......+ +. -++..+.+++++++||.|+..+-..+.+.+.+++
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~ 147 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDA 147 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHH
Confidence 9999986443322 22 2345667899999999999888777777776654
No 101
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.90 E-value=1.2e-09 Score=100.55 Aligned_cols=110 Identities=20% Similarity=0.235 Sum_probs=80.0
Q ss_pred CCCCEEEEEccChHHHHHHHHHcc-CCCeEEEEeCCCCCh-h--HhhcC--Ccc-cCHHHHhcccCEEEEcCCCCcccHH
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIP-YKVSKFLYTSRSKKP-E--ADKRG--AEH-TNIDDLCKQSDFIIITSALTPDTHH 112 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~-~G~~vv~~~~r~~~~-~--a~~~g--~~~-~sl~ell~~aDvVil~lPlt~~T~~ 112 (274)
...++|||||+|.||+.+++.|.. +|.+.+.++++.... + ....+ +.. .+++++++++|+|++++|.. ..
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~ 209 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EP 209 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Cc
Confidence 457899999999999999999875 477444444444332 2 23334 444 38999999999999999953 45
Q ss_pred hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 113 LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
++.. +.+++|++++++++...- ...+.+.+.++++.++|.
T Consensus 210 v~~~---~~l~~g~~vi~~g~~~p~-~~el~~~~~~~g~~~vD~ 249 (312)
T 2i99_A 210 ILFG---EWVKPGAHINAVGASRPD-WRELDDELMKEAVLYVDS 249 (312)
T ss_dssp CBCG---GGSCTTCEEEECCCCSTT-CCSBCHHHHHHSEEEESC
T ss_pred ccCH---HHcCCCcEEEeCCCCCCC-ceeccHHHHhcCEEEECC
Confidence 5554 568999999999887663 355666667778888883
No 102
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.86 E-value=2.2e-09 Score=93.29 Aligned_cols=94 Identities=18% Similarity=0.246 Sum_probs=69.7
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHH
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARL 119 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l 119 (274)
.+++|+|||+|.||+.+|+.|...|.++++++++..+.. ..+.++...+++++++++|+|++++|. ...+.++. +
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~-~~~~~v~~---l 102 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFR-EHYSSLCS---L 102 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCG-GGSGGGGG---G
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCCh-HHHHHHHH---H
Confidence 457899999999999999999999997777765433222 223355555888999999999999995 45566663 3
Q ss_pred hcCCCCcEEEEcCCCchhc
Q psy3240 120 ESMKPGAILINTSRGQLVD 138 (274)
Q Consensus 120 ~~mk~gailINv~RG~iVd 138 (274)
+.+.+++++|++++|...+
T Consensus 103 ~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 103 SDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp HHHHTTCEEEECCCCCHHH
T ss_pred HHhcCCCEEEEeCCCcccc
Confidence 3333799999999987654
No 103
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.84 E-value=7.7e-09 Score=91.24 Aligned_cols=87 Identities=14% Similarity=0.233 Sum_probs=62.2
Q ss_pred CCEEEEEccChHHHHHHHHHccCC----CeEEEEeCCCCChhHhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYK----VSKFLYTSRSKKPEADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G----~~vv~~~~r~~~~~a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~ 116 (274)
.++|+|||+|.||+.+|+.|...| .++++|+++..+ .|+... ++.++++++|+|++++| ....+.++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~~- 76 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVLN- 76 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHHH-
Confidence 468999999999999999998878 566666654433 466554 78899999999999999 456666653
Q ss_pred HHHhcCCCCcEEEEcCCCc
Q psy3240 117 ARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 117 ~~l~~mk~gailINv~RG~ 135 (274)
+..+.++++.++.+++.-+
T Consensus 77 ~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 77 NIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp HSGGGCTTCEEEECCSSCC
T ss_pred HHHHhcCCCEEEEECCCCC
Confidence 3445565444555555433
No 104
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.83 E-value=8.2e-09 Score=99.59 Aligned_cols=114 Identities=19% Similarity=0.189 Sum_probs=80.2
Q ss_pred CCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhc-------------------CCcc-cCHHHHhc
Q psy3240 36 CGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKR-------------------GAEH-TNIDDLCK 95 (274)
Q Consensus 36 ~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~-------------------g~~~-~sl~ell~ 95 (274)
++++..-++|+|||+|.||..+|..|.. |.++++|+....+.+.... ++.. .+++++++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~ 108 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR 108 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence 4577777899999999999999999988 9987777655433221111 2333 37889999
Q ss_pred ccCEEEEcCCCCcc-------cHHhc--cHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhh
Q psy3240 96 QSDFIIITSALTPD-------THHLI--NRARLESMKPGAILINTSRGQLVDQEALIDFIADIRV 151 (274)
Q Consensus 96 ~aDvVil~lPlt~~-------T~~li--~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i 151 (274)
.||+|++++|.... +..+. -+...+ +++|+++|+.|+..+-..+.+.+.+.+.++
T Consensus 109 ~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 109 NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred CCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 99999999997521 22232 134566 899999999999888788888887665443
No 105
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.82 E-value=8.4e-09 Score=94.84 Aligned_cols=104 Identities=12% Similarity=0.222 Sum_probs=75.0
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCC----CeEEEEeCCCC--Chh-HhhcCCccc-CHHHHhcccCEEEEcCCCCcccH
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYK----VSKFLYTSRSK--KPE-ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTH 111 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G----~~vv~~~~r~~--~~~-a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~ 111 (274)
+..++|+|||+|+||..+|+.|...| .++++++++.. +.+ ..+.|+... +..++++.||+|++++| ....+
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHH
Confidence 34568999999999999999999888 56666655443 222 345577654 78899999999999999 55666
Q ss_pred HhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhh
Q psy3240 112 HLINRARLESMKPGAILINTSRGQLVDQEALIDFIA 147 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~ 147 (274)
.++. +..+.+++++++|+++.|-. .+.+.+.+.
T Consensus 99 ~vl~-~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~ 131 (322)
T 2izz_A 99 FILD-EIGADIEDRHIVVSCAAGVT--ISSIEKKLS 131 (322)
T ss_dssp HHHH-HHGGGCCTTCEEEECCTTCC--HHHHHHHHH
T ss_pred HHHH-HHHhhcCCCCEEEEeCCCCC--HHHHHHHHh
Confidence 6663 45567889999999976643 334555443
No 106
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.82 E-value=5.7e-09 Score=84.62 Aligned_cols=91 Identities=19% Similarity=0.284 Sum_probs=67.9
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh--HhhcCCc---ccCHHHHhcccCEEEEcCCCCcccHHhccH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRGAE---HTNIDDLCKQSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g~~---~~sl~ell~~aDvVil~lPlt~~T~~li~~ 116 (274)
+++|+|||.|.||+.+++.|+..|+++++++++..+.. +...+.. ..+++++++++|+|+.++|... .++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~---~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKT---PIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSS---CSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCC---cEeeH
Confidence 89999999999999999999999998555554433322 3344543 2378899999999999999753 33443
Q ss_pred HHHhcCCCCcEEEEcCCCchhc
Q psy3240 117 ARLESMKPGAILINTSRGQLVD 138 (274)
Q Consensus 117 ~~l~~mk~gailINv~RG~iVd 138 (274)
+.+++|.+++|++...-++
T Consensus 98 ---~~l~~g~~vid~~~p~~~~ 116 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNPPNIE 116 (144)
T ss_dssp ---GGCCTTCEEEECCSSCSBC
T ss_pred ---HHcCCCCEEEEccCCccCC
Confidence 4578999999998754333
No 107
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.81 E-value=6.1e-09 Score=91.91 Aligned_cols=98 Identities=20% Similarity=0.396 Sum_probs=70.5
Q ss_pred CEEEEEccChHHHHHHHHHccCCC----eEEEEeCCCCChh-H-hhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKV----SKFLYTSRSKKPE-A-DKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~----~vv~~~~r~~~~~-a-~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
++|+|||+|+||+.+|+.|...|. ++++|+++..+.+ . ...|+... ++.+++++||+|++++|. ...+.++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH-
Confidence 689999999999999999999997 7777765544333 2 34577654 889999999999999974 4455555
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHh
Q psy3240 116 RARLESMKPGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~iVde~aL~~ 144 (274)
++..+.+++++++|.+..|-- .+.+.+
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi~--~~~l~~ 107 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGKS--IESTEN 107 (247)
T ss_dssp ---CCSSCTTCEEEECSCCSC--HHHHHH
T ss_pred HHHHhhcCCCCEEEEecCCCC--HHHHHH
Confidence 455566889999996655433 344444
No 108
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.80 E-value=7.6e-09 Score=93.89 Aligned_cols=100 Identities=9% Similarity=0.135 Sum_probs=68.9
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hh-----------hcC------------------Ccc-cCHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-AD-----------KRG------------------AEH-TNID 91 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~-----------~~g------------------~~~-~sl~ 91 (274)
++|+|||+|.||..+|..|...|.++++++.+....+ .. +.| +.. .+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999999997777765433221 10 122 122 3778
Q ss_pred HHhcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHh
Q psy3240 92 DLCKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 92 ell~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~ 144 (274)
+.++.||+|++++|...+.+.-+-++..+.++++++++..+.+- ....+.+
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~ 146 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIAN 146 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHT
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHH
Confidence 88999999999999765544434345556788999998544443 2344554
No 109
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.79 E-value=6.7e-09 Score=89.95 Aligned_cols=80 Identities=16% Similarity=0.243 Sum_probs=60.1
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHH
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRA 117 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~ 117 (274)
.++.+++|+|||+|.||+.+|+.|...|.++++++++ .. .+++||+|++++| .+.++.++. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~-~~---------------~~~~aD~vi~av~-~~~~~~v~~-~ 76 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSK-DQ---------------ATTLGEIVIMAVP-YPALAALAK-Q 76 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTT-CC---------------CSSCCSEEEECSC-HHHHHHHHH-H
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC-HH---------------HhccCCEEEEcCC-cHHHHHHHH-H
Confidence 4688999999999999999999999999976666543 21 4678999999999 666776664 3
Q ss_pred HHhcCCCCcEEEEcCCCch
Q psy3240 118 RLESMKPGAILINTSRGQL 136 (274)
Q Consensus 118 ~l~~mk~gailINv~RG~i 136 (274)
..+.++ ++++|++++|-.
T Consensus 77 l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 77 YATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp THHHHT-TSEEEECCCCBC
T ss_pred HHHhcC-CCEEEEECCCCC
Confidence 344567 999999999764
No 110
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.74 E-value=8.1e-09 Score=96.75 Aligned_cols=129 Identities=12% Similarity=0.172 Sum_probs=93.1
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc--------cCHHHHhcccCEEEEcCCCCc-
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH--------TNIDDLCKQSDFIIITSALTP- 108 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~--------~sl~ell~~aDvVil~lPlt~- 108 (274)
.+++++|+|+|.|.+|+.+++.++.+|+++++++++..+.+ ..+.+... .++.+.++.+|+|+.+++...
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 47889999999999999999999999997677766544333 32222211 245667788999999997533
Q ss_pred ccHHhccHHHHhcCCCCcEEEEcCC--CchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCccceeeeeec
Q psy3240 109 DTHHLINRARLESMKPGAILINTSR--GQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHVSAFIFIHM 186 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~gailINv~R--G~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (274)
.+..++.++.++.|+++.+++|++. |+.+ + +++.++++.+.+..+...++++.+
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~------e------------------~~~~~~~~~~~~~~~~v~~~~~~~ 299 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVAVDQGGCV------E------------------TLHPTSHTQPTYEVFGVVHYGVPN 299 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETTCTTCCSB------T------------------TCCCCCSSSCEEEETTEEEECCSC
T ss_pred CCCeecCHHHHhhCCCCCEEEEEecCCCCCC------c------------------cccCCCCCCCEEEECCEEEEEeCC
Confidence 2334567788999999999999984 3322 1 234566777777777777888888
Q ss_pred ccCCc
Q psy3240 187 IMGDT 191 (274)
Q Consensus 187 i~~~~ 191 (274)
+++.-
T Consensus 300 lp~~~ 304 (361)
T 1pjc_A 300 MPGAV 304 (361)
T ss_dssp GGGGC
T ss_pred cchhh
Confidence 88764
No 111
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.74 E-value=6.4e-08 Score=93.61 Aligned_cols=108 Identities=14% Similarity=0.218 Sum_probs=81.2
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcC---------------------Ccc-cCHHHHhcccCE
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRG---------------------AEH-TNIDDLCKQSDF 99 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g---------------------~~~-~sl~ell~~aDv 99 (274)
.-+++|||+|.||..+|..|...|.++++|+.+..+.+....+ +.. .++.++++.||+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 3589999999999999999999999888887766554421112 223 378899999999
Q ss_pred EEEcCCCCcc----------cHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhh
Q psy3240 100 IIITSALTPD----------THHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIR 150 (274)
Q Consensus 100 Vil~lPlt~~----------T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~ 150 (274)
|++|+|.... .+..+ .+..+.+++|+++|+.|+..+-..+.+.+.+.+.+
T Consensus 88 vii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~ 147 (446)
T 4a7p_A 88 VFIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVA 147 (446)
T ss_dssp EEECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHS
T ss_pred EEEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhC
Confidence 9999985432 33343 46778899999999999877666777777666643
No 112
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.73 E-value=1.9e-08 Score=88.90 Aligned_cols=94 Identities=16% Similarity=0.258 Sum_probs=67.5
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-H-hhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccHHHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-A-DKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINRARL 119 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a-~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l 119 (274)
++|+|||+|.||+.+|+.|...|..+.+++++..+.. . ...|+... +++++++++|+|++++| ..... +.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~-----~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFE-----TVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHH-----HHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHH-----HHH
Confidence 5899999999999999999998986555554333222 2 23466654 78999999999999999 44443 344
Q ss_pred hcCCCCcEEEEcCCCchhcHHHHHh
Q psy3240 120 ESMKPGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 120 ~~mk~gailINv~RG~iVde~aL~~ 144 (274)
..+++|.++|++..|-.. +.+.+
T Consensus 78 ~~l~~~~~vv~~~~~~~~--~~l~~ 100 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGISL--QRLAT 100 (259)
T ss_dssp TTSCCCSCEEECCTTCCH--HHHHH
T ss_pred HHhccCCEEEEeCCCCCH--HHHHH
Confidence 556789999999765433 34444
No 113
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.73 E-value=2.2e-08 Score=95.89 Aligned_cols=106 Identities=16% Similarity=0.136 Sum_probs=76.4
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhh-------------------cC-Ccc-cCHHHHhcccCEE
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADK-------------------RG-AEH-TNIDDLCKQSDFI 100 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~-------------------~g-~~~-~sl~ell~~aDvV 100 (274)
++|+|||+|.||..+|..|...|.++++++.+..+.. ..+ .+ +.. .+++++++.||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 4799999999999999999999997777765433222 111 22 222 3788889999999
Q ss_pred EEcCCCCcc---------cHHhccHHHHhcCCC---CcEEEEcCCCchhc-HHHHHhhhhhh
Q psy3240 101 IITSALTPD---------THHLINRARLESMKP---GAILINTSRGQLVD-QEALIDFIADI 149 (274)
Q Consensus 101 il~lPlt~~---------T~~li~~~~l~~mk~---gailINv~RG~iVd-e~aL~~~L~~~ 149 (274)
++|+|.... .+..+ ++..+.+++ ++++|+.|+..+-. .+.+.+.+++.
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~ 141 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDC 141 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHh
Confidence 999996544 44444 345556788 99999998877655 66677766653
No 114
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=98.73 E-value=6.5e-09 Score=99.17 Aligned_cols=124 Identities=18% Similarity=0.190 Sum_probs=95.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHccCCC---eEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccH
Q psy3240 41 QNSTVGIVGC-GRIGLSVLEKLIPYKV---SKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 41 ~gktVGIIGl-G~IG~~iA~~L~~~G~---~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~ 116 (274)
...+|.|||. |..|+..++.++++|+ .+.++|.+... .|.. + +.++++|+|+.++........++++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~-----~g~~---~-~~i~~aDivIn~vlig~~aP~Lvt~ 283 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETS-----RGGP---F-DEIPQADIFINCIYLSKPIAPFTNM 283 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHT-----TCSC---C-THHHHSSEEEECCCCCSSCCCSCCH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccc-----cCCc---h-hhHhhCCEEEECcCcCCCCCcccCH
Confidence 4678999999 9999999999999998 77777654311 1222 2 3456899999999987777789999
Q ss_pred HHHhcC-CCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhcccccccceeecCCCcccCcc-----ceeeeeecccCC
Q psy3240 117 ARLESM-KPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKHLHRVFTLGDSFHKGHV-----SAFIFIHMIMGD 190 (274)
Q Consensus 117 ~~l~~m-k~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~ 190 (274)
+.++.| |||+++||++- |.---.+ .+ .-+.+.+|+++|+|..++ ..+|++.++||.
T Consensus 284 e~v~~m~k~gsVIVDVA~----D~GG~~e--------t~------~f~~~~Tt~~~P~~~~~g~~~~~V~~~~v~nlP~~ 345 (394)
T 2qrj_A 284 EKLNNPNRRLRTVVDVSA----DTTNPHN--------PI------PIYTVATVFNKPTVLVPTTAGPKLSVISIDHLPSL 345 (394)
T ss_dssp HHHCCTTCCCCEEEETTC----CTTCTTC--------SS------CSCCCCCBTTBCCEEECCSSSSCEEEECCTTGGGG
T ss_pred HHHhcCcCCCeEEEEEec----CCCCCcC--------cc------cccccCCccCCCEEEECCCCCCCEEEEEeCChhhh
Confidence 999999 99999999972 2111111 00 012379999999999998 999999999997
Q ss_pred c
Q psy3240 191 T 191 (274)
Q Consensus 191 ~ 191 (274)
-
T Consensus 346 l 346 (394)
T 2qrj_A 346 L 346 (394)
T ss_dssp S
T ss_pred h
Confidence 4
No 115
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.71 E-value=1.1e-08 Score=99.88 Aligned_cols=99 Identities=22% Similarity=0.284 Sum_probs=70.8
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhh-----------cCC-------------cc-cCHHHHhc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADK-----------RGA-------------EH-TNIDDLCK 95 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~-----------~g~-------------~~-~sl~ell~ 95 (274)
-++|||||+|.||..+|+.+...|.++++++.+....+ +.+ .|. .. .+++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 46899999999999999999999998888775543322 111 221 12 2554 688
Q ss_pred ccCEEEEcCCCCcccHHhccHHHHhcCCCCcEE-EEcCCCchhcHHHHHh
Q psy3240 96 QSDFIIITSALTPDTHHLINRARLESMKPGAIL-INTSRGQLVDQEALID 144 (274)
Q Consensus 96 ~aDvVil~lPlt~~T~~li~~~~l~~mk~gail-INv~RG~iVde~aL~~ 144 (274)
+||+|+.++|...+.+.-+-++..+.++++++| .|+|.-.+ ..+.+
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i---~~ia~ 130 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISI---TAIAA 130 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHTT
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCH---HHHHH
Confidence 999999999987666554545677788999999 57876543 44544
No 116
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.69 E-value=5.5e-08 Score=94.01 Aligned_cols=107 Identities=16% Similarity=0.173 Sum_probs=78.4
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhh-------------------cC-Ccc-cCHHHHhcccCEE
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADK-------------------RG-AEH-TNIDDLCKQSDFI 100 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~-------------------~g-~~~-~sl~ell~~aDvV 100 (274)
++|+|||+|.||..+|..|...|.++++++.+..+.+ ..+ .+ +.. .+++++++.||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 6899999999999999999999998777765543322 111 11 222 3788899999999
Q ss_pred EEcCCCCc---------ccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhh
Q psy3240 101 IITSALTP---------DTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIR 150 (274)
Q Consensus 101 il~lPlt~---------~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~ 150 (274)
++|+|... ..+.++ ++..+.+++++++|+.|+..+-..+.+.+.+++.+
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~ 140 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEEL 140 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhc
Confidence 99999653 334443 45667799999999999866656667777666543
No 117
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.68 E-value=1.1e-08 Score=90.30 Aligned_cols=104 Identities=17% Similarity=0.327 Sum_probs=69.9
Q ss_pred CEEEEEccChHHHHHHHHHccCC-CeEEEEeCCCCChh-H-hhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccHHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYK-VSKFLYTSRSKKPE-A-DKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINRAR 118 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G-~~vv~~~~r~~~~~-a-~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~ 118 (274)
++|+|||+|.||+.+|+.|...| .++.+++++..+.. . ...|+... ++++++ .+|+|++++| ....+.++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~---- 74 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC---- 74 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH----
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH----
Confidence 47999999999999999999888 86666654433322 2 23476654 677788 9999999999 55555444
Q ss_pred HhcCC-CCcEEEEcCCCchhcHHHHHhhhhhhhheeehh
Q psy3240 119 LESMK-PGAILINTSRGQLVDQEALIDFIADIRVISISM 156 (274)
Q Consensus 119 l~~mk-~gailINv~RG~iVde~aL~~~L~~~~i~~~D~ 156 (274)
..++ +++++|+++.|-.. +.+.+.+.. +..++++
T Consensus 75 -~~l~~~~~ivv~~~~g~~~--~~l~~~~~~-~~~~v~~ 109 (263)
T 1yqg_A 75 -KNIRTNGALVLSVAAGLSV--GTLSRYLGG-TRRIVRV 109 (263)
T ss_dssp -TTCCCTTCEEEECCTTCCH--HHHHHHTTS-CCCEEEE
T ss_pred -HHhccCCCEEEEecCCCCH--HHHHHHcCC-CCcEEEE
Confidence 3332 28999999655433 556665443 3344444
No 118
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.67 E-value=4.4e-08 Score=88.58 Aligned_cols=101 Identities=12% Similarity=0.180 Sum_probs=73.0
Q ss_pred CCEEEEEccChHHHHHHHHHccCCC---eEEEEeCCCCChh-Hh-hcCCccc-CHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKV---SKFLYTSRSKKPE-AD-KRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~---~vv~~~~r~~~~~-a~-~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
.++|||||+|+||+.+|+.|...|. ++++++++..+.. .. ..|+... +..+++++||+|++++|. ...+.++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl~ 81 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVCE 81 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHHH
Confidence 4789999999999999999998887 6777765544333 22 3477654 889999999999999984 44555553
Q ss_pred HHHHhc-CCCCcEEEEcCCCchhcHHHHHhhh
Q psy3240 116 RARLES-MKPGAILINTSRGQLVDQEALIDFI 146 (274)
Q Consensus 116 ~~~l~~-mk~gailINv~RG~iVde~aL~~~L 146 (274)
+..+. +++++++|.++-|-. .+.+.+.+
T Consensus 82 -~l~~~~l~~~~iiiS~~agi~--~~~l~~~l 110 (280)
T 3tri_A 82 -ELKDILSETKILVISLAVGVT--TPLIEKWL 110 (280)
T ss_dssp -HHHHHHHTTTCEEEECCTTCC--HHHHHHHH
T ss_pred -HHHhhccCCCeEEEEecCCCC--HHHHHHHc
Confidence 34444 688889998776543 34555543
No 119
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.65 E-value=6.1e-08 Score=79.38 Aligned_cols=105 Identities=13% Similarity=0.188 Sum_probs=79.2
Q ss_pred CCCCEEEEEcc----ChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhc
Q psy3240 40 LQNSTVGIVGC----GRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLI 114 (274)
Q Consensus 40 L~gktVGIIGl----G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li 114 (274)
++-++|+|||+ |.||..++++|+..|++++.++++. .. -.|.... +++|+....|++++++| .+....++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~-~~---i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~ 86 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY-DE---IEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVA 86 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC-SE---ETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCC-Ce---ECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHH
Confidence 46789999999 9999999999999999644444432 11 1455544 89999999999999999 56777777
Q ss_pred cHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 115 NRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 115 ~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
. +..+ +..++++++++. ..+++.+..++.|+.++|
T Consensus 87 ~-~~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 87 K-EAVE-AGFKKLWFQPGA----ESEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp H-HHHH-TTCCEEEECTTS----CCHHHHHHHHHHTCEEEC
T ss_pred H-HHHH-cCCCEEEEcCcc----HHHHHHHHHHHCCCEEEc
Confidence 4 3444 566778887754 368888889999999988
No 120
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.63 E-value=1.2e-07 Score=86.97 Aligned_cols=103 Identities=15% Similarity=0.184 Sum_probs=71.0
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhhc-CC--------------c-ccCHHHHhcccCEEEEcCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKR-GA--------------E-HTNIDDLCKQSDFIIITSA 105 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~-g~--------------~-~~sl~ell~~aDvVil~lP 105 (274)
++|+|||+|.||..+|..|...|.++++++++..... ..+. +. . ..+++++++.+|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 6899999999999999999999997666654433222 2222 21 1 2378888899999999999
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhh
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIAD 148 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~ 148 (274)
... +..++ ++..+.+++++++|+. -|.......+.+.+.+
T Consensus 85 ~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 85 AIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp GGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred chH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 654 45555 4566778999999998 3311233334454544
No 121
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.60 E-value=1.1e-07 Score=86.97 Aligned_cols=113 Identities=14% Similarity=0.184 Sum_probs=79.0
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCC-Chh--HhhcCC---ccc---CHHHHhcccCEEEEcCCCCc
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSK-KPE--ADKRGA---EHT---NIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~-~~~--a~~~g~---~~~---sl~ell~~aDvVil~lPlt~ 108 (274)
.++.+++++|+|.|.+|+++|..|...|++.+...+|+. +.+ +...+. ... ++.+.++++|+|+.++|...
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 468899999999999999999999999984444444443 322 333333 222 45667889999999999754
Q ss_pred cc--HH-hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 109 DT--HH-LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 109 ~T--~~-li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
.. .. .++ .+.++++++++|++.. +... .|.+..+++|+.++|
T Consensus 217 ~~~~~~~~i~---~~~l~~~~~v~D~~y~-P~~T-~ll~~A~~~G~~~v~ 261 (297)
T 2egg_A 217 HPRVEVQPLS---LERLRPGVIVSDIIYN-PLET-KWLKEAKARGARVQN 261 (297)
T ss_dssp SSCCSCCSSC---CTTCCTTCEEEECCCS-SSSC-HHHHHHHHTTCEEEC
T ss_pred CCCCCCCCCC---HHHcCCCCEEEEcCCC-CCCC-HHHHHHHHCcCEEEC
Confidence 31 11 122 3457899999999985 3333 477778888887776
No 122
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.58 E-value=5e-08 Score=83.34 Aligned_cols=91 Identities=13% Similarity=0.160 Sum_probs=64.8
Q ss_pred CEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh-H-hhcC-------CcccCHHHHhcccCEEEEcCCCCcccHH
Q psy3240 43 STVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-A-DKRG-------AEHTNIDDLCKQSDFIIITSALTPDTHH 112 (274)
Q Consensus 43 ktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a-~~~g-------~~~~sl~ell~~aDvVil~lPlt~~T~~ 112 (274)
++|+|+| .|.||+.+|+.|...|.++++++++..+.. . ...+ +...+++++++++|+|++++|. ..++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~-~~~~~ 79 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPW-EHAID 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCH-HHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCCh-hhHHH
Confidence 4799999 999999999999999997777765433222 1 1112 3334788889999999999994 44555
Q ss_pred hccHHHHhcCCCCcEEEEcCCCch
Q psy3240 113 LINRARLESMKPGAILINTSRGQL 136 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~i 136 (274)
++. +..+.+ +++++|++++|--
T Consensus 80 ~~~-~l~~~~-~~~~vi~~~~g~~ 101 (212)
T 1jay_A 80 TAR-DLKNIL-REKIVVSPLVPVS 101 (212)
T ss_dssp HHH-HTHHHH-TTSEEEECCCCEE
T ss_pred HHH-HHHHHc-CCCEEEEcCCCcC
Confidence 543 233344 4899999998654
No 123
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.58 E-value=7.5e-08 Score=87.66 Aligned_cols=114 Identities=10% Similarity=0.089 Sum_probs=77.6
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChhHhhcCCcc---cCHHHHhcccCEEEEcCCCC--ccc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPEADKRGAEH---TNIDDLCKQSDFIIITSALT--PDT 110 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~a~~~g~~~---~sl~ell~~aDvVil~lPlt--~~T 110 (274)
+.+++|+++.|+|.|.+|++++..|...|+ ++++++++..+.+........ .++.++++++|+|+.++|.. +..
T Consensus 112 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~ 191 (277)
T 3don_A 112 YEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNT 191 (277)
T ss_dssp STTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCC
Confidence 457899999999999999999999999998 555554433322221122222 24566788999999999974 222
Q ss_pred HHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 111 HHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 111 ~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
...++ .+.++++++++|+..... . ..+.+..+++|+..+|
T Consensus 192 ~~~l~---~~~l~~~~~V~D~vY~P~-~-T~ll~~A~~~G~~~~~ 231 (277)
T 3don_A 192 DSVIS---LNRLASHTLVSDIVYNPY-K-TPILIEAEQRGNPIYN 231 (277)
T ss_dssp CCSSC---CTTCCSSCEEEESCCSSS-S-CHHHHHHHHTTCCEEC
T ss_pred cCCCC---HHHcCCCCEEEEecCCCC-C-CHHHHHHHHCcCEEeC
Confidence 11232 456789999999987643 3 3577778888887766
No 124
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.56 E-value=7e-08 Score=87.66 Aligned_cols=110 Identities=13% Similarity=0.144 Sum_probs=78.7
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHH-
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARL- 119 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l- 119 (274)
++++.|||.|.+|++++..|...|.++.+++++..+.+ ..+.++...+++++- ++|+|+.++|..-.....++.+.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l~-~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPKS-AFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCSS-CCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHhc-cCCEEEEcccCCCCCCCCCChHHHH
Confidence 89999999999999999999999965555544444433 224555544555543 899999999986432233555533
Q ss_pred hcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 120 ESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 120 ~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
+.++++.+++|+.... +..+.+..+++|+..+|
T Consensus 197 ~~l~~~~~v~D~vY~P---~T~ll~~A~~~G~~~~~ 229 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF---LTPFLSLAKELKTPFQD 229 (269)
T ss_dssp HHHHHCSEEEESCCSS---CCHHHHHHHHTTCCEEC
T ss_pred hhCCCCCEEEEeCCCC---chHHHHHHHHCcCEEEC
Confidence 2567899999999875 34477778888887766
No 125
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.56 E-value=1.7e-07 Score=82.28 Aligned_cols=100 Identities=19% Similarity=0.195 Sum_probs=71.6
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHh-cccCEEEEcCCCCcccHHhccHHHHhc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLC-KQSDFIIITSALTPDTHHLINRARLES 121 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell-~~aDvVil~lPlt~~T~~li~~~~l~~ 121 (274)
++|||||+|.||+.+++.+...|++++...++..+. .. .+.++++++ .++|+|++++|..... . .....
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~--~~---~~~~~~~l~~~~~DvVv~~~~~~~~~-~----~~~~~ 70 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEH--EK---MVRGIDEFLQREMDVAVEAASQQAVK-D----YAEKI 70 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCC--TT---EESSHHHHTTSCCSEEEECSCHHHHH-H----HHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcch--hh---hcCCHHHHhcCCCCEEEECCCHHHHH-H----HHHHH
Confidence 479999999999999999988888765455544322 11 345899999 6999999999953222 2 22345
Q ss_pred CCCCcEEEEcCCCchhcH---HHHHhhhhhhhhe
Q psy3240 122 MKPGAILINTSRGQLVDQ---EALIDFIADIRVI 152 (274)
Q Consensus 122 mk~gailINv~RG~iVde---~aL~~~L~~~~i~ 152 (274)
++.|..+|+.+.+..-+. +.|.+..+++|+.
T Consensus 71 l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 71 LKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp HHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred HHCCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 678999999988876655 5677766665554
No 126
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.55 E-value=8.3e-08 Score=83.45 Aligned_cols=90 Identities=20% Similarity=0.338 Sum_probs=62.2
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCCh-h--HhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccHH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKP-E--ADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINRA 117 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~-~--a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~ 117 (274)
-++|+|||+|+||+.+|+.|...|.++++..+|.... + ....+.... +..+.++++|+|++++|. ...+.++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~~~- 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIVTQ- 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHHTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHHHH-
Confidence 3689999999999999999999999777634544432 2 234465443 556678999999999993 333333321
Q ss_pred HHhcCCCCcEEEEcCCCc
Q psy3240 118 RLESMKPGAILINTSRGQ 135 (274)
Q Consensus 118 ~l~~mk~gailINv~RG~ 135 (274)
+.. .++.++|+++-|-
T Consensus 101 -l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 101 -VSD-WGGQIVVDASNAI 116 (220)
T ss_dssp -CSC-CTTCEEEECCCCB
T ss_pred -hhc-cCCCEEEEcCCCC
Confidence 222 3588999998654
No 127
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.55 E-value=2.4e-07 Score=89.50 Aligned_cols=95 Identities=25% Similarity=0.290 Sum_probs=76.1
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCC-----Ch--hHhhcCCcccCHHHHhcccCEEEEcCCCCccc
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSK-----KP--EADKRGAEHTNIDDLCKQSDFIIITSALTPDT 110 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~-----~~--~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T 110 (274)
.-|+||+|+|||+|+-|.+-|.+|+..|.++++.-+... +. .+.+.|....+.+|+++.||+|++.+|.. ..
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~-~q 111 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDK-QH 111 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGG-GH
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChh-hH
Confidence 358999999999999999999999999997776654211 11 16678888889999999999999999964 34
Q ss_pred HHhccHHHHhcCCCCcEEEEcCCCc
Q psy3240 111 HHLINRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 111 ~~li~~~~l~~mk~gailINv~RG~ 135 (274)
..++ ++..+.||+|+.|. .|.|=
T Consensus 112 ~~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 112 SDVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp HHHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred HHHH-HHHHhhCCCCCEEE-ecCcc
Confidence 4455 46999999999987 55654
No 128
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.54 E-value=1.3e-07 Score=85.98 Aligned_cols=90 Identities=11% Similarity=0.190 Sum_probs=65.5
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeC--CCCChh-HhhcCC-----------cc-c--CHHHHhcccCEEEEcCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTS--RSKKPE-ADKRGA-----------EH-T--NIDDLCKQSDFIIITSA 105 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~--r~~~~~-a~~~g~-----------~~-~--sl~ell~~aDvVil~lP 105 (274)
++|+|||+|.||..+|..|...|.+++++++ +....+ ..+.+. .. . ++.+.++.+|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4799999999999999999988987766665 332222 223332 22 2 56778899999999999
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCCCc
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~RG~ 135 (274)
.. .+..++ .+..+ +++++++|+++.|-
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGL 107 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSE
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcC
Confidence 64 555555 34556 88999999998764
No 129
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.51 E-value=1.2e-07 Score=84.82 Aligned_cols=102 Identities=16% Similarity=0.177 Sum_probs=69.1
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc-------------cCHHHHhc---ccCEEEEcCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH-------------TNIDDLCK---QSDFIIITSA 105 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~-------------~sl~ell~---~aDvVil~lP 105 (274)
++|+|||+|.||..+|..|...|.++++++++..... ..+.|... .+.+++.+ .+|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 5899999999999999999999997777655433222 22223211 13444444 8999999999
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhh
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIA 147 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~ 147 (274)
. ..++.++ ++..+.+++++++|+++.|- -..+.+.+.+.
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~ 122 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVP 122 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSC
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcC
Confidence 4 4555555 34566788999999997653 23355555443
No 130
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.51 E-value=2.6e-07 Score=87.73 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=73.5
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCC------------------cc-cCHHHHhcccCEEEE
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGA------------------EH-TNIDDLCKQSDFIII 102 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~------------------~~-~sl~ell~~aDvVil 102 (274)
++|+|||+|.||..+|..|.. |.++++++.+..+.. ..+.+. .. .++.+.++.||+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 479999999999999999998 987777765433322 222222 22 257788899999999
Q ss_pred cCCCCc----------ccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhh
Q psy3240 103 TSALTP----------DTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIAD 148 (274)
Q Consensus 103 ~lPlt~----------~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~ 148 (274)
++|... .++.++ ++..+ +++++++|+.++..+-..+.+.+.+.+
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~ 133 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQT 133 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTC
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCC
Confidence 999753 244444 34555 899999999888776667777775543
No 131
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.51 E-value=2.7e-07 Score=89.78 Aligned_cols=107 Identities=17% Similarity=0.177 Sum_probs=74.3
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhhc-------C-------------Ccc-cCHHHHhcccC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKR-------G-------------AEH-TNIDDLCKQSD 98 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~-------g-------------~~~-~sl~ell~~aD 98 (274)
..++|+|||+|.||..+|..|...|.++++++.+..+.+ ..+. + +.. .++++.++.||
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 357999999999999999999999998777765433322 1111 1 122 26778889999
Q ss_pred EEEEcCCCC---------cccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhh
Q psy3240 99 FIIITSALT---------PDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIAD 148 (274)
Q Consensus 99 vVil~lPlt---------~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~ 148 (274)
+|++|+|.. ...+.++ ++..+.+++++++|+.|...+-..+.+.+.+.+
T Consensus 87 vviiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 87 VQFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 999999963 2333343 345667999999999986544445555555544
No 132
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.50 E-value=2.8e-07 Score=89.18 Aligned_cols=100 Identities=19% Similarity=0.260 Sum_probs=67.3
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhh-----------cC-----------Cc-ccCHHHHhccc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADK-----------RG-----------AE-HTNIDDLCKQS 97 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~-----------~g-----------~~-~~sl~ell~~a 97 (274)
-++|+|||+|.||..+|..|...|.++++++.+..... ..+ .| .. ..++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 46899999999999999999999998777765433221 111 01 01 1255 568899
Q ss_pred CEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHh
Q psy3240 98 DFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 98 DvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~ 144 (274)
|+|+.++|...+.+.-+-.+..+.++++++|+.. +..+ ....+.+
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~sn-Ts~~-~~~~la~ 160 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTN-TSAL-NVDDIAS 160 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC-CSSS-CHHHHHT
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeC-CCCc-CHHHHHH
Confidence 9999999975444443434566678999999873 3332 3345665
No 133
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.50 E-value=7.9e-08 Score=97.86 Aligned_cols=91 Identities=14% Similarity=0.176 Sum_probs=66.1
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-H-----------hhcCC-------------cc-cCHHHHhc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-A-----------DKRGA-------------EH-TNIDDLCK 95 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a-----------~~~g~-------------~~-~sl~ell~ 95 (274)
=++|||||+|.||..+|..+...|.++++++.+..... . .+.|. .. .++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 35799999999999999999999998888776543221 1 11221 11 245 6788
Q ss_pred ccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEE-EcCC
Q psy3240 96 QSDFIIITSALTPDTHHLINRARLESMKPGAILI-NTSR 133 (274)
Q Consensus 96 ~aDvVil~lPlt~~T~~li~~~~l~~mk~gailI-Nv~R 133 (274)
+||+|+.++|...+.+..+-.+..+.++++++++ |+|.
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt 431 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST 431 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC
Confidence 9999999999877666555456777889999997 4543
No 134
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.49 E-value=4.7e-08 Score=90.75 Aligned_cols=92 Identities=8% Similarity=0.159 Sum_probs=65.8
Q ss_pred EEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcC--------------Ccc-cCHHHHhcccCEEEEcCCCC
Q psy3240 44 TVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRG--------------AEH-TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 44 tVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g--------------~~~-~sl~ell~~aDvVil~lPlt 107 (274)
+|+|||+|.||..+|..|...|.++++|+++....+ ..+.+ +.. .+++++++.+|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 899999999999999999988987666654432222 22211 222 3688889999999999994
Q ss_pred cccHHhccHH---HHhcCCC-CcEEEEcCCCch
Q psy3240 108 PDTHHLINRA---RLESMKP-GAILINTSRGQL 136 (274)
Q Consensus 108 ~~T~~li~~~---~l~~mk~-gailINv~RG~i 136 (274)
..++.++... ..+.+++ ++++|+++.|-.
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~ 128 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIE 128 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCC
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCC
Confidence 5556665431 4455678 899999986643
No 135
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.49 E-value=2.6e-07 Score=89.83 Aligned_cols=105 Identities=14% Similarity=0.143 Sum_probs=74.0
Q ss_pred CEEEEEccChHHHHHHHHHccC--CCeEEEEeCCCCChhHhhc--------------------CCcc-cCHHHHhcccCE
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY--KVSKFLYTSRSKKPEADKR--------------------GAEH-TNIDDLCKQSDF 99 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~--G~~vv~~~~r~~~~~a~~~--------------------g~~~-~sl~ell~~aDv 99 (274)
++|+|||+|.||..+|..|... |.++++++.+..+.+.... ++.. .++.+.++.||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999876 7877777654332221111 1222 256788899999
Q ss_pred EEEcCCCCcc--------------cHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhh
Q psy3240 100 IIITSALTPD--------------THHLINRARLESMKPGAILINTSRGQLVDQEALIDFIAD 148 (274)
Q Consensus 100 Vil~lPlt~~--------------T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~ 148 (274)
|++|+|.... .+..+ ++..+.+++++++|+.|+..+-..+.+.+.+++
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~-~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVS-RTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999986432 22222 456677999999999988776566667776665
No 136
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.48 E-value=1.9e-07 Score=87.65 Aligned_cols=96 Identities=14% Similarity=0.139 Sum_probs=70.6
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcC--------------Ccc-cCHHHHhcccCEEEEcC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRG--------------AEH-TNIDDLCKQSDFIIITS 104 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g--------------~~~-~sl~ell~~aDvVil~l 104 (274)
..++|+|||.|.||..+|..|...|.++.+|+++....+ ..+.+ +.. .+++++++.||+|++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV 107 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV 107 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence 347899999999999999999999997777765433222 22222 122 37889999999999999
Q ss_pred CCCcccHHhccHHHHhcCCCCcEEEEcCCCchhc
Q psy3240 105 ALTPDTHHLINRARLESMKPGAILINTSRGQLVD 138 (274)
Q Consensus 105 Plt~~T~~li~~~~l~~mk~gailINv~RG~iVd 138 (274)
|. ...+.++ ++..+.+++++++|+++.|-..+
T Consensus 108 p~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 108 PS-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp CH-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTT
T ss_pred CH-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcC
Confidence 95 3555555 45667789999999998765544
No 137
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.47 E-value=3.3e-07 Score=81.25 Aligned_cols=90 Identities=14% Similarity=0.208 Sum_probs=64.7
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhhc---CC----c-ccCHHHHhcccCEEEEcCCCCcccHHh
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKR---GA----E-HTNIDDLCKQSDFIIITSALTPDTHHL 113 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~---g~----~-~~sl~ell~~aDvVil~lPlt~~T~~l 113 (274)
++|+|||+|.||..+|..|...|.++++++++..+.. .... +. . ..+..+.++.+|+|++++|.. .++.+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~-~~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW-QVSDA 79 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG-GHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH-hHHHH
Confidence 4799999999999999999999997777765544322 1111 21 0 123346778899999999965 45666
Q ss_pred ccHHHHhcCCCCcEEEEcCCC
Q psy3240 114 INRARLESMKPGAILINTSRG 134 (274)
Q Consensus 114 i~~~~l~~mk~gailINv~RG 134 (274)
+ ++..+.+++++++|++..|
T Consensus 80 ~-~~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 80 V-KSLASTLPVTTPILLIHNG 99 (291)
T ss_dssp H-HHHHTTSCTTSCEEEECSS
T ss_pred H-HHHHhhCCCCCEEEEecCC
Confidence 5 3566778899999998655
No 138
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.46 E-value=6.2e-07 Score=86.43 Aligned_cols=108 Identities=17% Similarity=0.197 Sum_probs=74.8
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcc---cCHHHH---------------hcccCEE
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEH---TNIDDL---------------CKQSDFI 100 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~---~sl~el---------------l~~aDvV 100 (274)
.-+|.++.|||+|.||..+|..|...|.++++||.+..+.+....+... ..++|+ +++||+|
T Consensus 8 ~~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvv 87 (431)
T 3ojo_A 8 HHHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVF 87 (431)
T ss_dssp ----CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEE
T ss_pred cccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEE
Confidence 3578999999999999999999999999877777655443322222211 133433 3579999
Q ss_pred EEcCCCCcc--------cHHhcc--HHHHhcCCCCcEEEEcCCCchhcHHHHHhhh
Q psy3240 101 IITSALTPD--------THHLIN--RARLESMKPGAILINTSRGQLVDQEALIDFI 146 (274)
Q Consensus 101 il~lPlt~~--------T~~li~--~~~l~~mk~gailINv~RG~iVde~aL~~~L 146 (274)
++|+|.... ...+.. +...+.|++|+++|+.|+..+-..+.+.+.+
T Consensus 88 ii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 88 IIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp EECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred EEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHH
Confidence 999996542 223432 4677889999999999988877777776654
No 139
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.46 E-value=2.4e-07 Score=85.18 Aligned_cols=93 Identities=14% Similarity=0.146 Sum_probs=67.0
Q ss_pred CCEEEEEccChHHHHHHHHHccCC-------CeEEEEeCCCC-----Chh-Hhhc--------------CCcc-cCHHHH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYK-------VSKFLYTSRSK-----KPE-ADKR--------------GAEH-TNIDDL 93 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G-------~~vv~~~~r~~-----~~~-a~~~--------------g~~~-~sl~el 93 (274)
.++|+|||+|.||..+|..|...| .++++++++.. ... ..+. ++.. .+++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 468999999999999999998877 76666655443 222 1111 1222 367888
Q ss_pred hcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCch
Q psy3240 94 CKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQL 136 (274)
Q Consensus 94 l~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~i 136 (274)
++.||+|++++|. ..++.++ ++..+.+++++++|+++.|-.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 9999999999995 4555555 345567889999999988654
No 140
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.44 E-value=4.4e-07 Score=88.53 Aligned_cols=102 Identities=22% Similarity=0.250 Sum_probs=75.3
Q ss_pred CEEEEEccChHHHHHHHHHccC-CC-eEEEEeCCCC----ChhHhh----------------------cC-CcccCHHHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KV-SKFLYTSRSK----KPEADK----------------------RG-AEHTNIDDL 93 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~-~vv~~~~r~~----~~~a~~----------------------~g-~~~~sl~el 93 (274)
++|+|||+|.||..+|..|... |. ++++|+.+.. +.+... .+ ....+-.+.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~ea 98 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSR 98 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHHH
Confidence 6899999999999999999999 99 9988887665 222111 12 122222678
Q ss_pred hcccCEEEEcCCCC--------cccHHhcc--HHHHhcCCCCcEEEEcCCCchhcHHHHHh
Q psy3240 94 CKQSDFIIITSALT--------PDTHHLIN--RARLESMKPGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 94 l~~aDvVil~lPlt--------~~T~~li~--~~~l~~mk~gailINv~RG~iVde~aL~~ 144 (274)
++.||+|++|+|.. +++..+.. ....+.+++|+++|+.|+..+-..+.+.+
T Consensus 99 ~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~ 159 (478)
T 3g79_A 99 ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAK 159 (478)
T ss_dssp GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHH
T ss_pred HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHH
Confidence 89999999999975 34444442 45777899999999999877766666665
No 141
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.44 E-value=2e-07 Score=87.11 Aligned_cols=91 Identities=10% Similarity=0.171 Sum_probs=65.7
Q ss_pred CEEEEEccChHHHHHHHHHccCC-------CeEEEEeCCCC-----Chh-Hhhc--------------CCcc-cCHHHHh
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYK-------VSKFLYTSRSK-----KPE-ADKR--------------GAEH-TNIDDLC 94 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G-------~~vv~~~~r~~-----~~~-a~~~--------------g~~~-~sl~ell 94 (274)
++|+|||+|.||..+|..|...| .++++|+++.. ..+ ..+. ++.. .++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998777 77777765544 222 1111 1222 2678889
Q ss_pred cccCEEEEcCCCCcccHHhccHHHHh----cCCCCcEEEEcCCCc
Q psy3240 95 KQSDFIIITSALTPDTHHLINRARLE----SMKPGAILINTSRGQ 135 (274)
Q Consensus 95 ~~aDvVil~lPlt~~T~~li~~~~l~----~mk~gailINv~RG~ 135 (274)
+.+|+|++++|. ...+.++. +..+ .+++++++|+++.|-
T Consensus 102 ~~aDvVilav~~-~~~~~vl~-~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 102 NDADLLIFIVPC-QYLESVLA-SIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp TTCSEEEECCCH-HHHHHHHH-HHTC---CCCCTTCEEEECCCSC
T ss_pred cCCCEEEEcCCH-HHHHHHHH-HHhhhhhccCCCCCEEEEeCCcc
Confidence 999999999994 55665553 3445 688999999998763
No 142
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.43 E-value=2.4e-07 Score=83.13 Aligned_cols=108 Identities=14% Similarity=0.191 Sum_probs=75.0
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChhH--hhcCC-cccCHHHHhcccCEEEEcCCCC--cccHH
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPEA--DKRGA-EHTNIDDLCKQSDFIIITSALT--PDTHH 112 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~a--~~~g~-~~~sl~ell~~aDvVil~lPlt--~~T~~ 112 (274)
+++| +++|||.|.+|++++..|...|+ ++.+++++..+.+. ...+. ...++.+.++++|+|++++|.. ++ ..
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~-~~ 183 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGE-EL 183 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSC-CC
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCC-CC
Confidence 4678 99999999999999999999998 55555544332221 11121 2236778899999999999964 22 12
Q ss_pred hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhhe-eeh
Q psy3240 113 LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVI-SIS 155 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~-~~D 155 (274)
.++.+. ++++.+++|+..+ +..+++..+++|+. .+|
T Consensus 184 ~i~~~~---l~~~~~V~Divy~----~T~ll~~A~~~G~~~~~~ 220 (253)
T 3u62_A 184 PVSDDS---LKNLSLVYDVIYF----DTPLVVKARKLGVKHIIK 220 (253)
T ss_dssp SCCHHH---HTTCSEEEECSSS----CCHHHHHHHHHTCSEEEC
T ss_pred CCCHHH---hCcCCEEEEeeCC----CcHHHHHHHHCCCcEEEC
Confidence 344444 4789999999988 45566666667776 655
No 143
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.43 E-value=2.4e-07 Score=85.16 Aligned_cols=99 Identities=12% Similarity=0.255 Sum_probs=67.8
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcC-----------Ccc-cCHHHHhcccCEEEEcCCCCc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRG-----------AEH-TNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g-----------~~~-~sl~ell~~aDvVil~lPlt~ 108 (274)
-.+|+|||+|.||..+|..|...|.++.+++++..+.+ ..+.| +.. .++++ ++.+|+|++++|. .
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~-~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV-Q 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG-G
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH-H
Confidence 46899999999999999999999997666655433322 22333 233 36778 8899999999994 6
Q ss_pred ccHHhccHHHHhcCC-CCcEEEEcCCCchh-cHHHHHhhhh
Q psy3240 109 DTHHLINRARLESMK-PGAILINTSRGQLV-DQEALIDFIA 147 (274)
Q Consensus 109 ~T~~li~~~~l~~mk-~gailINv~RG~iV-de~aL~~~L~ 147 (274)
.++.++ ..++ +++++|+++.|--. ..+.+.+.+.
T Consensus 92 ~~~~v~-----~~l~~~~~~vv~~~nGi~~~~~~~l~~~~~ 127 (335)
T 1z82_A 92 YIREHL-----LRLPVKPSMVLNLSKGIEIKTGKRVSEIVE 127 (335)
T ss_dssp GHHHHH-----TTCSSCCSEEEECCCCCCTTTCCCHHHHHH
T ss_pred HHHHHH-----HHhCcCCCEEEEEeCCCCCCccCcHHHHHH
Confidence 665554 3343 78999999876322 2334444443
No 144
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.42 E-value=4.5e-07 Score=75.83 Aligned_cols=111 Identities=11% Similarity=0.137 Sum_probs=73.6
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh-HhhcCCccc-----C---HHHH--hcccCEEEEcCC
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE-ADKRGAEHT-----N---IDDL--CKQSDFIIITSA 105 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~-a~~~g~~~~-----s---l~el--l~~aDvVil~lP 105 (274)
.++.+++|+|+|+|.||+.+|+.|+.. |.++++++++..+.. ....|+... + +.++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 467889999999999999999999998 998888876554333 344565421 2 3334 678999999999
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
..+.+..++ ..+..+.+...+|..+.+ ..-.+.|++.|+.++.
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~~ii~~~~~-----~~~~~~l~~~G~~~vi 157 (183)
T 3c85_A 115 HHQGNQTAL--EQLQRRNYKGQIAAIAEY-----PDQLEGLLESGVDAAF 157 (183)
T ss_dssp SHHHHHHHH--HHHHHTTCCSEEEEEESS-----HHHHHHHHHHTCSEEE
T ss_pred ChHHHHHHH--HHHHHHCCCCEEEEEECC-----HHHHHHHHHcCCCEEE
Confidence 755554443 355666766666654432 1223345555655443
No 145
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.41 E-value=4.5e-07 Score=83.14 Aligned_cols=80 Identities=15% Similarity=0.242 Sum_probs=66.1
Q ss_pred CCCCCCCEEEEEccCh-HHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 37 GPALQNSTVGIVGCGR-IGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 37 g~~L~gktVGIIGlG~-IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
+.+++|+++.|||.|. +|+.+|+.|...|+++.+.++++ .++.+.+++||+|+.+++.. +++.
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~p----~lI~ 217 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------KNLRHHVENADLLIVAVGKP----GFIP 217 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------SCHHHHHHHCSEEEECSCCT----TCBC
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhccCCEEEECCCCc----CcCC
Confidence 5689999999999997 59999999999999877765443 36889999999999999832 2576
Q ss_pred HHHHhcCCCCcEEEEcCCCc
Q psy3240 116 RARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~ 135 (274)
.+. +|||+++||+|.-.
T Consensus 218 ~~~---vk~GavVIDVgi~r 234 (288)
T 1b0a_A 218 GDW---IKEGAIVIDVGINR 234 (288)
T ss_dssp TTT---SCTTCEEEECCCEE
T ss_pred HHH---cCCCcEEEEccCCc
Confidence 655 49999999999644
No 146
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.41 E-value=2.2e-07 Score=76.52 Aligned_cols=105 Identities=10% Similarity=0.147 Sum_probs=77.1
Q ss_pred CCEEEEEcc----ChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccH
Q psy3240 42 NSTVGIVGC----GRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 42 gktVGIIGl----G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~ 116 (274)
-++|+|||+ |++|..+++.|+..|++++.+++...... -.|.... +++|+....|++++++| .+....++..
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~--i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~~ 89 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKT--LLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQE 89 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSE--ETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccc--cCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHHH
Confidence 578999999 89999999999999987544444321011 1355543 78888889999999999 4677777743
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 117 ARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 117 ~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
..+ ...++++++.+.- ++++.+.+++.|+.++.
T Consensus 90 -~~~-~g~~~i~i~~~~~----~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 90 -AIA-IGAKTLWLQLGVI----NEQAAVLAREAGLSVVM 122 (145)
T ss_dssp -HHH-HTCCEEECCTTCC----CHHHHHHHHTTTCEEEC
T ss_pred -HHH-cCCCEEEEcCChH----HHHHHHHHHHcCCEEEc
Confidence 333 4667788876432 78888889998998874
No 147
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.40 E-value=6.1e-07 Score=82.16 Aligned_cols=80 Identities=16% Similarity=0.319 Sum_probs=65.5
Q ss_pred CCCCCCCEEEEEccCh-HHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 37 GPALQNSTVGIVGCGR-IGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 37 g~~L~gktVGIIGlG~-IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
+.+++||++.|||.|. +|+.+|+.|...|+++.+.++++ .++++.+++||+|+.+++. .+++.
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t------------~~L~~~~~~ADIVI~Avg~----p~~I~ 218 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------KDLSLYTRQADLIIVAAGC----VNLLR 218 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHTTCSEEEECSSC----TTCBC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhhcCCEEEECCCC----CCcCC
Confidence 4689999999999988 69999999999999776665432 2688999999999999984 24566
Q ss_pred HHHHhcCCCCcEEEEcCCCc
Q psy3240 116 RARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~ 135 (274)
.+. +|||+++||++.-.
T Consensus 219 ~~~---vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 219 SDM---VKEGVIVVDVGINR 235 (285)
T ss_dssp GGG---SCTTEEEEECCCEE
T ss_pred HHH---cCCCeEEEEeccCc
Confidence 544 59999999999643
No 148
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.39 E-value=6.5e-07 Score=81.94 Aligned_cols=79 Identities=19% Similarity=0.311 Sum_probs=64.6
Q ss_pred CCCCCCCEEEEEccCh-HHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 37 GPALQNSTVGIVGCGR-IGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 37 g~~L~gktVGIIGlG~-IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
+.+|+||++.|||.|. +|+.+|+.|...|+++.+.++++ .++++.+++||+|+.+++. .+++.
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I~ 219 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT------------TDLKSHTTKADILIVAVGK----PNFIT 219 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCBC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------hhHHHhcccCCEEEECCCC----CCCCC
Confidence 4689999999999988 69999999999999766665432 2688999999999999984 23466
Q ss_pred HHHHhcCCCCcEEEEcCCC
Q psy3240 116 RARLESMKPGAILINTSRG 134 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG 134 (274)
.+. +|||+++||++.-
T Consensus 220 ~~~---vk~GavVIDvgi~ 235 (285)
T 3l07_A 220 ADM---VKEGAVVIDVGIN 235 (285)
T ss_dssp GGG---SCTTCEEEECCCE
T ss_pred HHH---cCCCcEEEEeccc
Confidence 544 5999999999853
No 149
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.38 E-value=5.7e-07 Score=81.98 Aligned_cols=77 Identities=18% Similarity=0.357 Sum_probs=63.8
Q ss_pred CCCCEEEEEccCh-HHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHH
Q psy3240 40 LQNSTVGIVGCGR-IGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRAR 118 (274)
Q Consensus 40 L~gktVGIIGlG~-IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~ 118 (274)
++|+++.|||.|. +|+.+|+.|...|+++.+.++++ .++++.+++||+|+.+++. .+++..+.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT------------KDIGSMTRSSKIVVVAVGR----PGFLNREM 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHHSSEEEECSSC----TTCBCGGG
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc------------ccHHHhhccCCEEEECCCC----CccccHhh
Confidence 9999999999986 79999999999999877765432 3688999999999999985 23566654
Q ss_pred HhcCCCCcEEEEcCCCc
Q psy3240 119 LESMKPGAILINTSRGQ 135 (274)
Q Consensus 119 l~~mk~gailINv~RG~ 135 (274)
+|+|+++||+|.-.
T Consensus 212 ---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 212 ---VTPGSVVIDVGINY 225 (276)
T ss_dssp ---CCTTCEEEECCCEE
T ss_pred ---ccCCcEEEEeccCc
Confidence 59999999999643
No 150
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.37 E-value=6.7e-07 Score=81.88 Aligned_cols=80 Identities=18% Similarity=0.316 Sum_probs=65.5
Q ss_pred CCCCCCCEEEEEccCh-HHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 37 GPALQNSTVGIVGCGR-IGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 37 g~~L~gktVGIIGlG~-IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
+.+++||++.|||.|. +|+.+|+.|...|+++.+..+++ .++++.+++||+|+.+++. .+++.
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T------------~~L~~~~~~ADIVI~Avg~----p~~I~ 219 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT------------RDLADHVSRADLVVVAAGK----PGLVK 219 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHTCSEEEECCCC----TTCBC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC------------cCHHHHhccCCEEEECCCC----CCCCC
Confidence 5689999999999987 79999999999999777665443 2688999999999999984 24566
Q ss_pred HHHHhcCCCCcEEEEcCCCc
Q psy3240 116 RARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~ 135 (274)
.+. +|||+++||++.-.
T Consensus 220 ~~~---vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 220 GEW---IKEGAIVIDVGINR 236 (286)
T ss_dssp GGG---SCTTCEEEECCSCS
T ss_pred HHH---cCCCeEEEEecccc
Confidence 654 49999999998643
No 151
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.36 E-value=1e-06 Score=81.15 Aligned_cols=80 Identities=18% Similarity=0.391 Sum_probs=66.2
Q ss_pred CCCCCCCEEEEEccCh-HHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 37 GPALQNSTVGIVGCGR-IGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 37 g~~L~gktVGIIGlG~-IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
+.++.|+++.|||.|. +|+.+|+.|...|+++.+.++++ .++.+.+++||+|+.+++.. +++.
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~p----~~I~ 223 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT------------AHLDEEVNKGDILVVATGQP----EMVK 223 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCCT----TCBC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc------------ccHHHHhccCCEEEECCCCc----ccCC
Confidence 5689999999999996 69999999999999777765432 36889999999999999852 3566
Q ss_pred HHHHhcCCCCcEEEEcCCCc
Q psy3240 116 RARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~ 135 (274)
.+. +|||+++||+|.-.
T Consensus 224 ~~~---vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 224 GEW---IKPGAIVIDCGINY 240 (301)
T ss_dssp GGG---SCTTCEEEECCCBC
T ss_pred HHH---cCCCcEEEEccCCC
Confidence 655 48999999999754
No 152
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.36 E-value=9.1e-07 Score=80.81 Aligned_cols=80 Identities=19% Similarity=0.357 Sum_probs=65.2
Q ss_pred CCCCCCCEEEEEccChH-HHHHHHHHccC--CCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHh
Q psy3240 37 GPALQNSTVGIVGCGRI-GLSVLEKLIPY--KVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHL 113 (274)
Q Consensus 37 g~~L~gktVGIIGlG~I-G~~iA~~L~~~--G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~l 113 (274)
+.+++|+++.|||.|.| |+.+|+.|... |+++.+.++++ .++.+.+++||+|+.+++.. ++
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t------------~~L~~~~~~ADIVI~Avg~p----~~ 216 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT------------RDLPALTRQADIVVAAVGVA----HL 216 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC------------SCHHHHHTTCSEEEECSCCT----TC
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch------------hHHHHHHhhCCEEEECCCCC----cc
Confidence 56899999999999986 99999999998 88766665433 36889999999999999842 24
Q ss_pred ccHHHHhcCCCCcEEEEcCCCc
Q psy3240 114 INRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 114 i~~~~l~~mk~gailINv~RG~ 135 (274)
+..+. +|+|+++||+|.-.
T Consensus 217 I~~~~---vk~GavVIDVgi~r 235 (281)
T 2c2x_A 217 LTADM---VRPGAAVIDVGVSR 235 (281)
T ss_dssp BCGGG---SCTTCEEEECCEEE
T ss_pred cCHHH---cCCCcEEEEccCCC
Confidence 76655 48999999999644
No 153
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.35 E-value=6.7e-07 Score=82.44 Aligned_cols=80 Identities=16% Similarity=0.278 Sum_probs=65.1
Q ss_pred CCCCCCCEEEEEccCh-HHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHH--HHhcccCEEEEcCCCCcccHHh
Q psy3240 37 GPALQNSTVGIVGCGR-IGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNID--DLCKQSDFIIITSALTPDTHHL 113 (274)
Q Consensus 37 g~~L~gktVGIIGlG~-IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~--ell~~aDvVil~lPlt~~T~~l 113 (274)
+.+++|+++.|||.|. +|+.+|+.|...|+++.+.++++. +++ +.+++||+|+.++|. .++
T Consensus 160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~------------~l~l~~~~~~ADIVI~Avg~----p~~ 223 (300)
T 4a26_A 160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS------------TEDMIDYLRTADIVIAAMGQ----PGY 223 (300)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC------------HHHHHHHHHTCSEEEECSCC----TTC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC------------CchhhhhhccCCEEEECCCC----CCC
Confidence 4689999999999988 799999999999997777665433 355 899999999999985 235
Q ss_pred ccHHHHhcCCCCcEEEEcCCCc
Q psy3240 114 INRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 114 i~~~~l~~mk~gailINv~RG~ 135 (274)
+..+. +|+|+++||++.-.
T Consensus 224 I~~~~---vk~GavVIDvgi~~ 242 (300)
T 4a26_A 224 VKGEW---IKEGAAVVDVGTTP 242 (300)
T ss_dssp BCGGG---SCTTCEEEECCCEE
T ss_pred CcHHh---cCCCcEEEEEeccC
Confidence 66544 59999999999644
No 154
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.33 E-value=4.3e-07 Score=92.61 Aligned_cols=90 Identities=20% Similarity=0.206 Sum_probs=64.4
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hh-----------hcCC-------------cc-cCHHHHhcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-AD-----------KRGA-------------EH-TNIDDLCKQ 96 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~-----------~~g~-------------~~-~sl~ell~~ 96 (274)
++|+|||+|.||..+|..+...|.++++++.+..... .. +.|. .. .++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 6899999999999999999999998888776543221 10 1121 11 255 57889
Q ss_pred cCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEE-cCC
Q psy3240 97 SDFIIITSALTPDTHHLINRARLESMKPGAILIN-TSR 133 (274)
Q Consensus 97 aDvVil~lPlt~~T~~li~~~~l~~mk~gailIN-v~R 133 (274)
||+|+.++|...+.+.-+-.+..+.++++++++. +|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt 429 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST 429 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC
Confidence 9999999998766555454566777899999864 543
No 155
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.31 E-value=5.2e-06 Score=76.62 Aligned_cols=90 Identities=19% Similarity=0.356 Sum_probs=66.2
Q ss_pred CCCEEEEEccChHHHHHHHHHcc-CCCeEEEEeCCCCChh-Hhh----cCCc--ccCHHHHhcccCEEEEcCCCCcccHH
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIP-YKVSKFLYTSRSKKPE-ADK----RGAE--HTNIDDLCKQSDFIIITSALTPDTHH 112 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~-~G~~vv~~~~r~~~~~-a~~----~g~~--~~sl~ell~~aDvVil~lPlt~~T~~ 112 (274)
..++++|||.|.||+.+++.|.. ++.+.+.+++|+.... +.+ .|+. ..++++++++||+|++|+|... .
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~~---p 196 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRSTT---P 196 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCSS---C
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCCC---c
Confidence 46899999999999999999875 4565555555553322 222 3553 2399999999999999999743 4
Q ss_pred hccHHHHhcCCCCcEEEEcCCCch
Q psy3240 113 LINRARLESMKPGAILINTSRGQL 136 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~i 136 (274)
++.. +.++||+.++++|...+
T Consensus 197 vl~~---~~l~~G~~V~~vGs~~p 217 (313)
T 3hdj_A 197 LFAG---QALRAGAFVGAIGSSLP 217 (313)
T ss_dssp SSCG---GGCCTTCEEEECCCSST
T ss_pred ccCH---HHcCCCcEEEECCCCCC
Confidence 5543 45899999999998654
No 156
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.26 E-value=8.5e-07 Score=83.08 Aligned_cols=113 Identities=11% Similarity=0.097 Sum_probs=73.6
Q ss_pred CCCCEEEEEccChHHHHHHHHHc-cCCCeEEEEeCCCCCh-h--Hhhc----CC--cc-cCHHHHhcccCEEEEcCCCCc
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLI-PYKVSKFLYTSRSKKP-E--ADKR----GA--EH-TNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~-~~G~~vv~~~~r~~~~-~--a~~~----g~--~~-~sl~ell~~aDvVil~lPlt~ 108 (274)
...++++|||+|.||+.+++.+. ..+.+.+.+++|+... + +... ++ .. .++++++++||+|++|+|...
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~ 206 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA 206 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC
Confidence 35689999999999999998875 3555555555555432 2 2222 43 22 389999999999999999752
Q ss_pred ccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhh
Q psy3240 109 DTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMV 157 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~ 157 (274)
...++.. +.+++|+.++++|...+- ...|-..+..++..++|..
T Consensus 207 -~~pvl~~---~~l~~G~~V~~vgs~~p~-~~El~~~~~~~a~v~vD~~ 250 (350)
T 1x7d_A 207 -YATIITP---DMLEPGMHLNAVGGDCPG-KTELHADVLRNARVFVEYE 250 (350)
T ss_dssp -EEEEECG---GGCCTTCEEEECSCCBTT-BEEECHHHHHTSEEEESSH
T ss_pred -CCceecH---HHcCCCCEEEECCCCCCC-ceeeCHHHHhcCcEEECCH
Confidence 2345543 467999999999975542 1111112222355788843
No 157
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.25 E-value=5.4e-07 Score=83.77 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=66.4
Q ss_pred CCCCCCCCEEEEEccChH-HHHHHHHHccCCCeEEEEeCCCCChh--HhhcC---Ccc--------cCHHHHhcccCEEE
Q psy3240 36 CGPALQNSTVGIVGCGRI-GLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRG---AEH--------TNIDDLCKQSDFII 101 (274)
Q Consensus 36 ~g~~L~gktVGIIGlG~I-G~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g---~~~--------~sl~ell~~aDvVi 101 (274)
.|.++.|+++.|||.|.| |+.+|+.|.+.|+++.+.+++..... +...+ ... .++.+.+++||+|+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEE
Confidence 356899999999999976 99999999999997665543311110 11111 111 36889999999999
Q ss_pred EcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCc
Q psy3240 102 ITSALTPDTHHLINRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 102 l~lPlt~~T~~li~~~~l~~mk~gailINv~RG~ 135 (274)
.+++.. .-+|..+. +|+|+++||+|.-.
T Consensus 251 sAtg~p---~~vI~~e~---vk~GavVIDVgi~r 278 (320)
T 1edz_A 251 TGVPSE---NYKFPTEY---IKEGAVCINFACTK 278 (320)
T ss_dssp ECCCCT---TCCBCTTT---SCTTEEEEECSSSC
T ss_pred ECCCCC---cceeCHHH---cCCCeEEEEcCCCc
Confidence 999852 12366655 48999999998643
No 158
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.25 E-value=2.8e-06 Score=78.87 Aligned_cols=101 Identities=19% Similarity=0.130 Sum_probs=73.2
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-H-----------hhcC--------------Ccc-cCHHHH
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-A-----------DKRG--------------AEH-TNIDDL 93 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a-----------~~~g--------------~~~-~sl~el 93 (274)
.-.+|+|||.|.||+.+|..+...|++|++||....... + .+.| +.. .++++.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 346899999999999999999999999988886543211 0 0111 111 278889
Q ss_pred hcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEE-EcCCCchhcHHHHHh
Q psy3240 94 CKQSDFIIITSALTPDTHHLINRARLESMKPGAILI-NTSRGQLVDQEALID 144 (274)
Q Consensus 94 l~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailI-Nv~RG~iVde~aL~~ 144 (274)
++.||+|+=++|-.-+.+.-+-++.=+.++++++|- |+|. +....+.+
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs---l~is~ia~ 133 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC---LLPSKLFT 133 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS---CCHHHHHT
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh---ccchhhhh
Confidence 999999999999888877766666777789999884 4444 44456666
No 159
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.25 E-value=3.6e-06 Score=68.73 Aligned_cols=97 Identities=10% Similarity=0.109 Sum_probs=62.9
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hh-hcCCccc-----C---HHHH-hcccCEEEEcCC
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-AD-KRGAEHT-----N---IDDL-CKQSDFIIITSA 105 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~-~~g~~~~-----s---l~el-l~~aDvVil~lP 105 (274)
...+.+++|.|+|+|.+|+.+|+.|+..|.++++++++..+.. .. ..|.... + +.+. +..+|+|++++|
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 3677899999999999999999999999998777776554333 22 3444321 2 2222 678999999999
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCCCc
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~RG~ 135 (274)
.......+ ......+.+...+|-..++.
T Consensus 94 ~~~~~~~~--~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 94 DDSTNFFI--SMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp CHHHHHHH--HHHHHHTSCCSEEEEECSSG
T ss_pred CcHHHHHH--HHHHHHHCCCCeEEEEECCH
Confidence 64433322 23444455556666655554
No 160
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.25 E-value=5.4e-07 Score=82.09 Aligned_cols=114 Identities=17% Similarity=0.194 Sum_probs=78.0
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh--HhhcC----CcccCHHHHhcccCEEEEcCCCCcc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE--ADKRG----AEHTNIDDLCKQSDFIIITSALTPD 109 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~--a~~~g----~~~~sl~ell~~aDvVil~lPlt~~ 109 (274)
|.+++|+++.|+|.|.+|++++..|...|+ ++.+++++..+.+ +...+ +...+++++.+++|+|+.++|..-.
T Consensus 121 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~ 200 (281)
T 3o8q_A 121 QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLD 200 (281)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC-
T ss_pred CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCC
Confidence 567899999999999999999999999997 5555554433322 22222 2334667766889999999998643
Q ss_pred cH-HhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhhe-eeh
Q psy3240 110 TH-HLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVI-SIS 155 (274)
Q Consensus 110 T~-~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~-~~D 155 (274)
.. ..+.. +.++++++++|+.-.. .. ..+.+..+++|+. .+|
T Consensus 201 ~~~~~l~~---~~l~~~~~V~DlvY~P-~~-T~ll~~A~~~G~~~~~~ 243 (281)
T 3o8q_A 201 GELPAIDP---VIFSSRSVCYDMMYGK-GY-TVFNQWARQHGCAQAID 243 (281)
T ss_dssp ---CSCCG---GGEEEEEEEEESCCCS-SC-CHHHHHHHHTTCSEEEC
T ss_pred CCCCCCCH---HHhCcCCEEEEecCCC-cc-CHHHHHHHHCCCCEEEC
Confidence 21 12332 3467899999998764 33 3466777777876 655
No 161
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=98.23 E-value=6e-07 Score=80.80 Aligned_cols=101 Identities=10% Similarity=0.065 Sum_probs=67.8
Q ss_pred CEEEEEccChHHHHHHHHHccC-----C-CeEEEEeCCCCChh-Hhh-cCCccc--------------CHHHHhcccCEE
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-----K-VSKFLYTSRSKKPE-ADK-RGAEHT--------------NIDDLCKQSDFI 100 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-----G-~~vv~~~~r~~~~~-a~~-~g~~~~--------------sl~ell~~aDvV 100 (274)
++|+|||+|.||..+|..|... | .+++++++ ..+.+ ..+ .|+... +..+.++.+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 5899999999999999999887 8 76666654 32222 233 444321 334567889999
Q ss_pred EEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhh
Q psy3240 101 IITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIA 147 (274)
Q Consensus 101 il~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~ 147 (274)
++++|... ++.++ ++..+.+++++++|++.-| +-..+.+.+.+.
T Consensus 88 il~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~ 131 (317)
T 2qyt_A 88 LFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLP 131 (317)
T ss_dssp EECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSC
T ss_pred EEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCC
Confidence 99999654 55555 3455567789999998766 222345555443
No 162
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.21 E-value=2.5e-07 Score=82.99 Aligned_cols=86 Identities=13% Similarity=0.123 Sum_probs=53.2
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEE-EEeCCCCChh--HhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKF-LYTSRSKKPE--ADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARL 119 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv-~~~~r~~~~~--a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l 119 (274)
++|||||+|+||+.+|+.|... .+++ +++++..+.. ....+....+++++++++|+|++++|... .. +.+
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~-~~-----~v~ 75 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRY-IK-----TVA 75 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTT-HH-----HHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHH-HH-----HHH
Confidence 4799999999999999999876 6553 4543322222 22345522367788889999999999743 33 333
Q ss_pred hcC-CCCcEEEEcCCCc
Q psy3240 120 ESM-KPGAILINTSRGQ 135 (274)
Q Consensus 120 ~~m-k~gailINv~RG~ 135 (274)
..+ ++++++||++.+-
T Consensus 76 ~~l~~~~~ivi~~s~~~ 92 (276)
T 2i76_A 76 NHLNLGDAVLVHCSGFL 92 (276)
T ss_dssp TTTCCSSCCEEECCSSS
T ss_pred HHhccCCCEEEECCCCC
Confidence 344 6889999998553
No 163
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.15 E-value=2e-06 Score=77.26 Aligned_cols=115 Identities=17% Similarity=0.171 Sum_probs=73.8
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh--HhhcC----CcccCHHHHhc-ccCEEEEcCCCCcc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRG----AEHTNIDDLCK-QSDFIIITSALTPD 109 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g----~~~~sl~ell~-~aDvVil~lPlt~~ 109 (274)
|.++.+++++|+|.|.+|+++|..|...|.++++++++..+.+ +...+ +...+++++.+ ++|+|+.++|....
T Consensus 114 ~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~ 193 (272)
T 1p77_A 114 NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLS 193 (272)
T ss_dssp TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC---
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCC
Confidence 4578999999999999999999999999986666655433322 22211 22234555444 89999999997543
Q ss_pred cHH-hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhhe-eeh
Q psy3240 110 THH-LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVI-SIS 155 (274)
Q Consensus 110 T~~-li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~-~~D 155 (274)
..- -+..+.+ +++.+++|+......+.. +.+..+++|+. .+|
T Consensus 194 ~~~~~i~~~~l---~~~~~v~D~~y~p~~~t~-ll~~a~~~G~~~~v~ 237 (272)
T 1p77_A 194 GGTASVDAEIL---KLGSAFYDMQYAKGTDTP-FIALCKSLGLTNVSD 237 (272)
T ss_dssp ----CCCHHHH---HHCSCEEESCCCTTSCCH-HHHHHHHTTCCCEEC
T ss_pred CCCCCCCHHHc---CCCCEEEEeeCCCCcCCH-HHHHHHHcCCCEeeC
Confidence 210 1343433 578999999986544344 55556666765 554
No 164
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.14 E-value=4.3e-06 Score=76.56 Aligned_cols=103 Identities=17% Similarity=0.269 Sum_probs=68.0
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCC-------------cc-cCHHHHhcccCEEEEc
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGA-------------EH-TNIDDLCKQSDFIIIT 103 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~-------------~~-~sl~ell~~aDvVil~ 103 (274)
....++|+|||.|.||..+|..|...|.++.++ .+....+ ..+.|. .. .++++ ++.+|+|+++
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vila 93 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFC 93 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEEC
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEE
Confidence 456789999999999999999999999977766 5433222 222232 11 24444 5889999999
Q ss_pred CCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhh
Q psy3240 104 SALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFI 146 (274)
Q Consensus 104 lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L 146 (274)
+|.. .++.++ ++..+.+++++++|.+.-|= -.++.+.+.+
T Consensus 94 vk~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi-~~~~~l~~~~ 133 (318)
T 3hwr_A 94 VKST-DTQSAA-LAMKPALAKSALVLSLQNGV-ENADTLRSLL 133 (318)
T ss_dssp CCGG-GHHHHH-HHHTTTSCTTCEEEEECSSS-SHHHHHHHHC
T ss_pred cccc-cHHHHH-HHHHHhcCCCCEEEEeCCCC-CcHHHHHHHc
Confidence 9965 566665 34556778999999987663 2234555533
No 165
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.14 E-value=2.3e-06 Score=80.50 Aligned_cols=110 Identities=14% Similarity=0.079 Sum_probs=73.4
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHh--hcC---Cc---ccCHHHHhcccCEEEEcCCCCccc
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEAD--KRG---AE---HTNIDDLCKQSDFIIITSALTPDT 110 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~--~~g---~~---~~sl~ell~~aDvVil~lPlt~~T 110 (274)
+=++++|+|||+|.||+.+|+.|... .++.+++++..+.+.. ..+ +. ..+++++++++|+|++++|....
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~- 90 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG- 90 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHH-
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhh-
Confidence 45688999999999999999999877 7666665543332211 111 11 12577889999999999985422
Q ss_pred HHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 111 HHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 111 ~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
..+ ..+.++.|+.++|++.. .-+..+|.+..++.|+.++.
T Consensus 91 ~~v----~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~~l~ 130 (365)
T 2z2v_A 91 FKS----IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVTIVF 130 (365)
T ss_dssp HHH----HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCEEEC
T ss_pred HHH----HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCEEEE
Confidence 122 22335688999998853 34556777878888887764
No 166
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.11 E-value=3.4e-06 Score=77.85 Aligned_cols=89 Identities=16% Similarity=0.259 Sum_probs=63.8
Q ss_pred CCCEEEEEccChHHHHHHHHHcc-CCCeEEEEeCCCCChh---Hhhc-----CCcccCHHHHhcccCEEEEcCCCCcccH
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIP-YKVSKFLYTSRSKKPE---ADKR-----GAEHTNIDDLCKQSDFIIITSALTPDTH 111 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~-~G~~vv~~~~r~~~~~---a~~~-----g~~~~sl~ell~~aDvVil~lPlt~~T~ 111 (274)
..++++|||+|.+|+.+++.|.. .+.+.+..++|+.... +... .+...++++++ ++|+|++++|...
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~~--- 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSRK--- 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCSS---
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCCC---
Confidence 56799999999999999999876 4555565566654332 2221 12334889999 9999999999643
Q ss_pred HhccHHHHhcCCCCcEEEEcCCCch
Q psy3240 112 HLINRARLESMKPGAILINTSRGQL 136 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~RG~i 136 (274)
.++.. +.+++|+.++++|.-.+
T Consensus 200 pv~~~---~~l~~G~~V~~ig~~~p 221 (322)
T 1omo_A 200 PVVKA---EWVEEGTHINAIGADGP 221 (322)
T ss_dssp CCBCG---GGCCTTCEEEECSCCST
T ss_pred ceecH---HHcCCCeEEEECCCCCC
Confidence 44542 46799999999976544
No 167
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.07 E-value=3.3e-06 Score=77.69 Aligned_cols=89 Identities=15% Similarity=0.217 Sum_probs=64.2
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCc-------------c-cCHHHHhcccCEEEEcCCC
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAE-------------H-TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~-------------~-~sl~ell~~aDvVil~lPl 106 (274)
.++|+|||.|.||..+|..|...|.++.++++. ...+ ..+.|.. . .++++ ++.+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 468999999999999999999999877777653 2222 3333432 1 25665 5889999999996
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
..++.++. +..+.+++++++|.+.-|
T Consensus 81 -~~~~~~~~-~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 81 -PALESVAA-GIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp -HHHHHHHG-GGSSSCCTTCEEEECCSS
T ss_pred -hhHHHHHH-HHHhhCCCCCEEEEECCC
Confidence 45555542 334457789999998888
No 168
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.07 E-value=5.3e-06 Score=74.44 Aligned_cols=110 Identities=14% Similarity=0.153 Sum_probs=71.8
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh--HhhcC----CcccCHHHHh-cccCEEEEcCCCCcc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRG----AEHTNIDDLC-KQSDFIIITSALTPD 109 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g----~~~~sl~ell-~~aDvVil~lPlt~~ 109 (274)
|.++.|++++|+|.|.||+++|+.|...|.++++++++..+.. +...+ +...+++++. .++|+|+.++|....
T Consensus 114 ~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~ 193 (271)
T 1nyt_A 114 SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGIS 193 (271)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGG
T ss_pred CcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCC
Confidence 4578899999999999999999999999986555544332222 22222 1123444444 589999999997543
Q ss_pred cHHh--ccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhhe
Q psy3240 110 THHL--INRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVI 152 (274)
Q Consensus 110 T~~l--i~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~ 152 (274)
. .+ +.. ..++++.+++|+...... ..+.+..+++|+.
T Consensus 194 ~-~~~~i~~---~~l~~~~~v~D~~y~p~~--t~~~~~a~~~G~~ 232 (271)
T 1nyt_A 194 G-DIPAIPS---SLIHPGIYCYDMFYQKGK--TPFLAWCEQRGSK 232 (271)
T ss_dssp T-CCCCCCG---GGCCTTCEEEESCCCSSC--CHHHHHHHHTTCC
T ss_pred C-CCCCCCH---HHcCCCCEEEEeccCCcC--CHHHHHHHHcCCC
Confidence 1 11 222 236789999999886422 2355556666665
No 169
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.07 E-value=1.7e-05 Score=62.12 Aligned_cols=89 Identities=17% Similarity=0.136 Sum_probs=58.1
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hh-hcCCcc-----cCHHH---H-hcccCEEEEcCCCCccc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-AD-KRGAEH-----TNIDD---L-CKQSDFIIITSALTPDT 110 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~-~~g~~~-----~sl~e---l-l~~aDvVil~lPlt~~T 110 (274)
+++|+|+|+|.+|+.+|+.|...|.++++++++..... .. ..+... .+.+. . +..+|+|++++|.....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 47899999999999999999999998777776543322 22 235432 12222 2 57899999999864332
Q ss_pred HHhccHHHHhcCCCCcEEEEcC
Q psy3240 111 HHLINRARLESMKPGAILINTS 132 (274)
Q Consensus 111 ~~li~~~~l~~mk~gailINv~ 132 (274)
. .-....+.++++.+++-+.
T Consensus 84 ~--~~~~~~~~~~~~~ii~~~~ 103 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIARIS 103 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEECS
T ss_pred H--HHHHHHHHcCCCEEEEEec
Confidence 2 2224455577777766443
No 170
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.06 E-value=5.4e-06 Score=66.75 Aligned_cols=89 Identities=18% Similarity=0.305 Sum_probs=61.3
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-----C---HHHH-hcccCEEEEcCCCCcccH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-----N---IDDL-CKQSDFIIITSALTPDTH 111 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-----s---l~el-l~~aDvVil~lPlt~~T~ 111 (274)
..+|.|+|+|.+|+.+|+.|+..|.++++++.+..... ..+.|+... + +.++ +.++|+|++++|....+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 35799999999999999999999998888887655443 444565421 2 2221 468999999999766554
Q ss_pred HhccHHHHhcCCCCcEEEEcC
Q psy3240 112 HLINRARLESMKPGAILINTS 132 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~ 132 (274)
.++ ..+..+.++..+|-..
T Consensus 87 ~~~--~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 87 EIV--ASARAKNPDIEIIARA 105 (140)
T ss_dssp HHH--HHHHHHCSSSEEEEEE
T ss_pred HHH--HHHHHHCCCCeEEEEE
Confidence 443 3445555666665433
No 171
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=98.05 E-value=8.6e-06 Score=73.74 Aligned_cols=114 Identities=11% Similarity=0.151 Sum_probs=76.9
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCCh-h--HhhcC---CcccCHHHHh-cccCEEEEcCCCCcc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKP-E--ADKRG---AEHTNIDDLC-KQSDFIIITSALTPD 109 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~-~--a~~~g---~~~~sl~ell-~~aDvVil~lPlt~~ 109 (274)
|.+++|+++.|+|.|.+|++++..|...|+..+...+|+... + +...+ +...+++++- .++|+|+.++|..-.
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~ 194 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLT 194 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCC
Confidence 457899999999999999999999999997445445555432 2 22222 2233555554 789999999997422
Q ss_pred cH-HhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhhe-eeh
Q psy3240 110 TH-HLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVI-SIS 155 (274)
Q Consensus 110 T~-~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~-~~D 155 (274)
.. ..+.. +.++++++++|+.-.. .. ..+.+..+++|+. .+|
T Consensus 195 ~~~~~i~~---~~l~~~~~V~DlvY~P-~~-T~ll~~A~~~G~~~~~~ 237 (272)
T 3pwz_A 195 ADLPPLPA---DVLGEAALAYELAYGK-GL-TPFLRLAREQGQARLAD 237 (272)
T ss_dssp TCCCCCCG---GGGTTCSEEEESSCSC-CS-CHHHHHHHHHSCCEEEC
T ss_pred CCCCCCCH---HHhCcCCEEEEeecCC-CC-CHHHHHHHHCCCCEEEC
Confidence 11 12333 3468999999998764 22 3466667777876 655
No 172
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.98 E-value=3.7e-05 Score=69.44 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=72.1
Q ss_pred CCEEEEEccChHHHH-HHHHHcc-CCCeEEEEeCCCCCh-h--HhhcCCcc-cCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 42 NSTVGIVGCGRIGLS-VLEKLIP-YKVSKFLYTSRSKKP-E--ADKRGAEH-TNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 42 gktVGIIGlG~IG~~-iA~~L~~-~G~~vv~~~~r~~~~-~--a~~~g~~~-~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
..+|||||+|.||+. .++.++. -+++++.+.++.... . +...|+.. .+++++++++|+|++++|........
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~-- 83 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEII-- 83 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHHH--
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHH--
Confidence 478999999999996 8888876 467666555554432 2 34456653 58999999999999999964433222
Q ss_pred HHHHhcCCCCcEEEE-cCCCchhcHHHHHhhhhhhhheee
Q psy3240 116 RARLESMKPGAILIN-TSRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 116 ~~~l~~mk~gailIN-v~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
...++.=| .+++. ...-.+-+.++|.+..++.|+.+.
T Consensus 84 ~~al~~gk--~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~ 121 (308)
T 3uuw_A 84 KILLNLGV--HVYVDKPLASTVSQGEELIELSTKKNLNLM 121 (308)
T ss_dssp HHHHHTTC--EEEECSSSSSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHCCC--cEEEcCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 23333222 25554 233455577788888888776443
No 173
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.96 E-value=2.5e-05 Score=71.18 Aligned_cols=113 Identities=12% Similarity=0.178 Sum_probs=74.9
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcccCHHHH--hcccCEEEEcCCCC--cccH
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHTNIDDL--CKQSDFIIITSALT--PDTH 111 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~sl~el--l~~aDvVil~lPlt--~~T~ 111 (274)
|.++.|+++.|+|.|.+|++++..|...|++.+...+|+.... .........+++++ + ++|+|+.++|.. +...
T Consensus 117 ~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~l-~~DivInaTp~Gm~~~~~ 195 (282)
T 3fbt_A 117 RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSNL-KGDVIINCTPKGMYPKEG 195 (282)
T ss_dssp TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTTC-CCSEEEECSSTTSTTSTT
T ss_pred CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHhc-cCCEEEECCccCccCCCc
Confidence 5678999999999999999999999999984444444443322 22222222233332 4 899999999973 2211
Q ss_pred -HhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 112 -HLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 112 -~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
-.+..+.+ +++.+++|+.-... +..|++.-+++|+..+|
T Consensus 196 ~~pi~~~~l---~~~~~v~DlvY~P~--~T~ll~~A~~~G~~~~~ 235 (282)
T 3fbt_A 196 ESPVDKEVV---AKFSSAVDLIYNPV--ETLFLKYARESGVKAVN 235 (282)
T ss_dssp CCSSCHHHH---TTCSEEEESCCSSS--SCHHHHHHHHTTCEEEC
T ss_pred cCCCCHHHc---CCCCEEEEEeeCCC--CCHHHHHHHHCcCeEeC
Confidence 12455554 68899999975442 35666667777887666
No 174
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.95 E-value=4.7e-05 Score=72.40 Aligned_cols=96 Identities=14% Similarity=0.233 Sum_probs=74.2
Q ss_pred CCCCCCCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCC----CCCh--------h--HhhcCC--cccCHHHHhcccC
Q psy3240 36 CGPALQNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSR----SKKP--------E--ADKRGA--EHTNIDDLCKQSD 98 (274)
Q Consensus 36 ~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r----~~~~--------~--a~~~g~--~~~sl~ell~~aD 98 (274)
.|..+...+|.|+|.|.+|..+|+.|.+.|. +++++|++ ..+. . +...+. ...+|+|+++.+|
T Consensus 186 ~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~AD 265 (388)
T 1vl6_A 186 TEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGAD 265 (388)
T ss_dssp HTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCS
T ss_pred hCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCC
Confidence 4678999999999999999999999999998 45666665 3221 1 222221 1237999999999
Q ss_pred EEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCch
Q psy3240 99 FIIITSALTPDTHHLINRARLESMKPGAILINTSRGQL 136 (274)
Q Consensus 99 vVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~i 136 (274)
+++-+.. .++++++.++.|+++++++.+|+-..
T Consensus 266 VlIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~ 298 (388)
T 1vl6_A 266 FFIGVSR-----GNILKPEWIKKMSRKPVIFALANPVP 298 (388)
T ss_dssp EEEECSC-----SSCSCHHHHTTSCSSCEEEECCSSSC
T ss_pred EEEEeCC-----CCccCHHHHHhcCCCCEEEEcCCCCC
Confidence 9988632 28899999999999999999997543
No 175
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.95 E-value=1.4e-05 Score=73.08 Aligned_cols=101 Identities=11% Similarity=0.105 Sum_probs=69.0
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCC---------------cc-cCHHHHhcccCEEEEcCCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGA---------------EH-TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~---------------~~-~sl~ell~~aDvVil~lPl 106 (274)
++|+|||.|.||..+|..|...|.++.+++++. .....+.|+ .. .+++++.+.+|+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~ 81 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD-YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV 81 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT-HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh-HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence 689999999999999999999998777766543 222222221 11 2566666689999999996
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhh
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIA 147 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~ 147 (274)
.. ++.++ +...+.+++++++|.+.-|= -.++.+.+.+.
T Consensus 82 ~~-~~~~l-~~l~~~l~~~t~Iv~~~nGi-~~~~~l~~~~~ 119 (320)
T 3i83_A 82 VE-GADRV-GLLRDAVAPDTGIVLISNGI-DIEPEVAAAFP 119 (320)
T ss_dssp CT-TCCHH-HHHTTSCCTTCEEEEECSSS-SCSHHHHHHST
T ss_pred CC-hHHHH-HHHHhhcCCCCEEEEeCCCC-ChHHHHHHHCC
Confidence 54 34444 34556678899999887652 23456666444
No 176
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.93 E-value=1.8e-05 Score=72.00 Aligned_cols=114 Identities=15% Similarity=0.195 Sum_probs=77.5
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCCh-h--Hhhc-----CCc--c---cCHHHHhcccCEEEEc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKP-E--ADKR-----GAE--H---TNIDDLCKQSDFIIIT 103 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~-~--a~~~-----g~~--~---~sl~ell~~aDvVil~ 103 (274)
+.+++|+++.|+|.|.+|++++..|...|++.+...+|+... + +... +.. . .++++.++++|+|+.+
T Consensus 122 ~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVIna 201 (283)
T 3jyo_A 122 LPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNA 201 (283)
T ss_dssp CTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEEC
T ss_pred CcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEEC
Confidence 357899999999999999999999999999544444554332 2 1111 111 1 2677888999999999
Q ss_pred CCCCcccH--HhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 104 SALTPDTH--HLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 104 lPlt~~T~--~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
+|..-... -.+. .+.++++.+++|+.-... +..|++.-+++|+..+|
T Consensus 202 Tp~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P~--~T~ll~~A~~~G~~~~~ 250 (283)
T 3jyo_A 202 TPMGMPAHPGTAFD---VSCLTKDHWVGDVVYMPI--ETELLKAARALGCETLD 250 (283)
T ss_dssp SSTTSTTSCSCSSC---GGGCCTTCEEEECCCSSS--SCHHHHHHHHHTCCEEC
T ss_pred CCCCCCCCCCCCCC---HHHhCCCCEEEEecCCCC--CCHHHHHHHHCcCeEeC
Confidence 99642111 1133 345788999999976542 34566666777876665
No 177
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.91 E-value=4.4e-05 Score=69.98 Aligned_cols=107 Identities=18% Similarity=0.174 Sum_probs=70.3
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh---HhhcCCcc-cCHHHHhc--ccCEEEEcCCCCcccHHhcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE---ADKRGAEH-TNIDDLCK--QSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~---a~~~g~~~-~sl~ell~--~aDvVil~lPlt~~T~~li~ 115 (274)
.+|||||+|.||+..++.++.. +++++.+.++..... +...|... .+++++++ ++|+|++++|........
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~-- 82 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLI-- 82 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHH--
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHH--
Confidence 5899999999999999999876 676665555544332 34456543 48999998 899999999964433322
Q ss_pred HHHHhcCCCCcEEEEcC-CCchhcHHHHHhhhhhhhhee
Q psy3240 116 RARLESMKPGAILINTS-RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 116 ~~~l~~mk~gailINv~-RG~iVde~aL~~~L~~~~i~~ 153 (274)
...++.=| .+++.-- .-.+-+.++|.+..++.|+.+
T Consensus 83 ~~al~~gk--~v~~EKP~~~~~~~~~~l~~~a~~~g~~~ 119 (344)
T 3euw_A 83 TRAVERGI--PALCEKPIDLDIEMVRACKEKIGDGASKV 119 (344)
T ss_dssp HHHHHTTC--CEEECSCSCSCHHHHHHHHHHHGGGGGGE
T ss_pred HHHHHcCC--cEEEECCCCCCHHHHHHHHHHHHhcCCeE
Confidence 23333222 3555432 334456667777777777643
No 178
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.91 E-value=2.9e-05 Score=61.82 Aligned_cols=90 Identities=13% Similarity=0.104 Sum_probs=57.2
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc-----cCHHHH----hcccCEEEEcCCCCcc
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH-----TNIDDL----CKQSDFIIITSALTPD 109 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~-----~sl~el----l~~aDvVil~lPlt~~ 109 (274)
..++++.|+|+|.+|+.+|+.|...|.++++++++..... ....+... .+.+.+ +.++|+|++++|..+.
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEF 83 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHH
Confidence 3467899999999999999999999998888887554333 33445432 122222 4679999999994333
Q ss_pred cHHhccHHHHhcCCCCcEEEEc
Q psy3240 110 THHLINRARLESMKPGAILINT 131 (274)
Q Consensus 110 T~~li~~~~l~~mk~gailINv 131 (274)
.+.-...++.+....+++-+
T Consensus 84 --n~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 84 --NLKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp --HHHHHHHHHHHCCCCEEEEE
T ss_pred --HHHHHHHHHHhCCceEEEEE
Confidence 23333444444544444433
No 179
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.90 E-value=3.5e-05 Score=70.30 Aligned_cols=107 Identities=17% Similarity=0.221 Sum_probs=71.3
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCCh-h--HhhcCCcccCHHHHhc--ccCEEEEcCCCCcccHHhccH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKP-E--ADKRGAEHTNIDDLCK--QSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~-~--a~~~g~~~~sl~ell~--~aDvVil~lPlt~~T~~li~~ 116 (274)
.+|||||+|.||+..++.++.. +++++.+.++.... . +...++.+.+++++++ ++|+|++++|........ .
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~--~ 81 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPTDTHADLI--E 81 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCGGGHHHHH--H
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCchhHHHHH--H
Confidence 5899999999999999999875 67666555554432 2 4456777558999998 799999999964433322 2
Q ss_pred HHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhheee
Q psy3240 117 ARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 117 ~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
..++ .|. +++.- -.-.+-+.++|.+..++.|+.+.
T Consensus 82 ~al~---~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~ 118 (331)
T 4hkt_A 82 RFAR---AGKAIFCEKPIDLDAERVRACLKVVSDTKAKLM 118 (331)
T ss_dssp HHHH---TTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred HHHH---cCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 3333 333 44432 23444566777777777776443
No 180
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.90 E-value=2.6e-05 Score=61.31 Aligned_cols=95 Identities=13% Similarity=0.214 Sum_probs=58.0
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc-----cCHH---HH-hcccCEEEEcCCCCc
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH-----TNID---DL-CKQSDFIIITSALTP 108 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~-----~sl~---el-l~~aDvVil~lPlt~ 108 (274)
.+.+++|+|+|+|.+|+.+++.|...|.++++++++..... ....+... .+.+ ++ +..+|+|+.++|...
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI 82 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCH
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCch
Confidence 35678999999999999999999999998777776433222 22223321 1222 22 568999999998642
Q ss_pred ccHHhccHHHHhcCCCCcEEEEcCCCc
Q psy3240 109 DTHHLINRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~gailINv~RG~ 135 (274)
++ .+.-......+.+. .+|-.+++.
T Consensus 83 ~~-~~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 83 QA-STLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp HH-HHHHHHHHHHTTCS-EEEEECCSH
T ss_pred HH-HHHHHHHHHHcCCC-eEEEEeCCH
Confidence 22 22223444556666 455444443
No 181
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.90 E-value=4.6e-05 Score=70.25 Aligned_cols=106 Identities=15% Similarity=0.217 Sum_probs=70.4
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh---HhhcCCcc-cCHHHHh--cccCEEEEcCCCCcccHHhcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE---ADKRGAEH-TNIDDLC--KQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~---a~~~g~~~-~sl~ell--~~aDvVil~lPlt~~T~~li~ 115 (274)
.+|||||+|.||+..++.++.. +++++.+.++..... +...|+.. .++++++ .+.|+|++++|........
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~-- 83 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEVI-- 83 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHH--
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHH--
Confidence 5899999999999999999887 776665555544322 34456654 4899999 5699999999975443322
Q ss_pred HHHHhcCCCCc-EEEEcC-CCchhcHHHHHhhhhhhhhee
Q psy3240 116 RARLESMKPGA-ILINTS-RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 116 ~~~l~~mk~ga-ilINv~-RG~iVde~aL~~~L~~~~i~~ 153 (274)
...++ .|. +++.-- .-.+-+.++|.+..++.|+.+
T Consensus 84 ~~al~---~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~ 120 (354)
T 3db2_A 84 EQCAR---SGKHIYVEKPISVSLDHAQRIDQVIKETGVKF 120 (354)
T ss_dssp HHHHH---TTCEEEEESSSCSSHHHHHHHHHHHHHHCCCE
T ss_pred HHHHH---cCCEEEEccCCCCCHHHHHHHHHHHHHcCCeE
Confidence 23333 333 444432 334456677777777766643
No 182
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.89 E-value=3.2e-05 Score=70.32 Aligned_cols=101 Identities=15% Similarity=0.183 Sum_probs=68.0
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc--------------c-cCHHHHhcccCEEEEcCCCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE--------------H-TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~--------------~-~sl~ell~~aDvVil~lPlt 107 (274)
++|+|||.|.||..+|..|...|.++.+++++. .....+.|.. . .+.++ ++.+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~~ 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD-YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKTF 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT-HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc-HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCCC
Confidence 579999999999999999999998777776543 2223333321 1 14444 67899999999964
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhh
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIAD 148 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~ 148 (274)
.++.++ ++..+.+++++++|.+.-|= -.++.+.+.+..
T Consensus 81 -~~~~~l-~~l~~~l~~~~~iv~l~nGi-~~~~~l~~~~~~ 118 (312)
T 3hn2_A 81 -ANSRYE-ELIRPLVEEGTQILTLQNGL-GNEEALATLFGA 118 (312)
T ss_dssp -GGGGHH-HHHGGGCCTTCEEEECCSSS-SHHHHHHHHTCG
T ss_pred -CcHHHH-HHHHhhcCCCCEEEEecCCC-CcHHHHHHHCCC
Confidence 344444 34556688999999987662 234556665543
No 183
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.88 E-value=1.5e-05 Score=60.64 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=56.6
Q ss_pred CCCEEEEEccChHHHHHHHHHccCC-CeEEEEeCCCCChh-HhhcCCcc--------cCHHHHhcccCEEEEcCCCCccc
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYK-VSKFLYTSRSKKPE-ADKRGAEH--------TNIDDLCKQSDFIIITSALTPDT 110 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G-~~vv~~~~r~~~~~-a~~~g~~~--------~sl~ell~~aDvVil~lPlt~~T 110 (274)
.+++|+|+|.|.||+.+++.|...| .++++++++..+.. ....++.. .++.++++.+|+|+.++|... +
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-T 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-H
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-h
Confidence 4679999999999999999999999 66666665433322 22334321 135567889999999997432 2
Q ss_pred HHhccHHHHhcCCCCcEEEEcC
Q psy3240 111 HHLINRARLESMKPGAILINTS 132 (274)
Q Consensus 111 ~~li~~~~l~~mk~gailINv~ 132 (274)
..++.. . .+.|.-.++++
T Consensus 83 ~~~~~~-~---~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIAKA-A---KAAGAHYFDLT 100 (118)
T ss_dssp HHHHHH-H---HHTTCEEECCC
T ss_pred HHHHHH-H---HHhCCCEEEec
Confidence 222221 1 24566777765
No 184
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.86 E-value=3e-05 Score=71.46 Aligned_cols=78 Identities=22% Similarity=0.365 Sum_probs=63.8
Q ss_pred CCCCCCCEEEEEccCh-HHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 37 GPALQNSTVGIVGCGR-IGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 37 g~~L~gktVGIIGlG~-IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
+-++.||++.|||-++ +|+.+|..|...++.+.+..+++. ++.+..++||+|+.++.- .+++.
T Consensus 174 ~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~------------dl~~~~~~ADIvV~A~G~----p~~i~ 237 (303)
T 4b4u_A 174 NIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQ------------NLPELVKQADIIVGAVGK----AELIQ 237 (303)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS------------SHHHHHHTCSEEEECSCS----TTCBC
T ss_pred CCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCC------------CHHHHhhcCCeEEeccCC----CCccc
Confidence 5689999999999864 699999999999997777665543 688899999999998753 24676
Q ss_pred HHHHhcCCCCcEEEEcCC
Q psy3240 116 RARLESMKPGAILINTSR 133 (274)
Q Consensus 116 ~~~l~~mk~gailINv~R 133 (274)
.++ .|+|+++||+|-
T Consensus 238 ~d~---vk~GavVIDVGi 252 (303)
T 4b4u_A 238 KDW---IKQGAVVVDAGF 252 (303)
T ss_dssp GGG---SCTTCEEEECCC
T ss_pred ccc---ccCCCEEEEece
Confidence 654 599999999984
No 185
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.86 E-value=2.7e-05 Score=73.04 Aligned_cols=87 Identities=13% Similarity=0.079 Sum_probs=60.5
Q ss_pred CEEEEEccChHHHHHHHHHcc-CCCeEEEEeCCCCChh---H-hh-cC---------C---------c-c-cCHHHHhcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIP-YKVSKFLYTSRSKKPE---A-DK-RG---------A---------E-H-TNIDDLCKQ 96 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~-~G~~vv~~~~r~~~~~---a-~~-~g---------~---------~-~-~sl~ell~~ 96 (274)
++|+|||.|.||..+|..|.. .|.++++++.+.+..+ . .. .+ . . . .+++++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 489999999999999999976 5887777762222111 1 11 11 1 1 2 267888999
Q ss_pred cCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEc
Q psy3240 97 SDFIIITSALTPDTHHLINRARLESMKPGAILINT 131 (274)
Q Consensus 97 aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv 131 (274)
+|+|++++|.. ..+.++ ++..+.+++++++|..
T Consensus 83 aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 99999999954 345554 3455667889999985
No 186
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.85 E-value=5.2e-05 Score=68.85 Aligned_cols=108 Identities=15% Similarity=0.209 Sum_probs=69.7
Q ss_pred CEEEEEccChHHHHH-HHHHccCCCeEEEEeCCCCChh---HhhcCCc--ccCHHHHhc--ccCEEEEcCCCCcccHHhc
Q psy3240 43 STVGIVGCGRIGLSV-LEKLIPYKVSKFLYTSRSKKPE---ADKRGAE--HTNIDDLCK--QSDFIIITSALTPDTHHLI 114 (274)
Q Consensus 43 ktVGIIGlG~IG~~i-A~~L~~~G~~vv~~~~r~~~~~---a~~~g~~--~~sl~ell~--~aDvVil~lPlt~~T~~li 114 (274)
.+|||||+|.||+.+ ++.++..+++++.+.++..... +...++. +.+++++++ ++|+|++++|........
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~- 79 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQT- 79 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHH-
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHH-
Confidence 379999999999998 7777667787665555544322 3445663 348999987 499999999953322211
Q ss_pred cHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhheeeh
Q psy3240 115 NRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 115 ~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
...++.|. +++.- .....-+.+.|.+..++.|+.+..
T Consensus 80 ----~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~ 118 (332)
T 2glx_A 80 ----LAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGT 118 (332)
T ss_dssp ----HHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ----HHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 22244565 55542 233445667788877777775544
No 187
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.84 E-value=9e-05 Score=67.19 Aligned_cols=108 Identities=17% Similarity=0.227 Sum_probs=69.9
Q ss_pred CEEEEEccChHHHH-HHHHHcc-CCCeEEEEeCCCC-Chh--HhhcCCcc-cCHHHHhcccCEEEEcCCCCcccHHhccH
Q psy3240 43 STVGIVGCGRIGLS-VLEKLIP-YKVSKFLYTSRSK-KPE--ADKRGAEH-TNIDDLCKQSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 43 ktVGIIGlG~IG~~-iA~~L~~-~G~~vv~~~~r~~-~~~--a~~~g~~~-~sl~ell~~aDvVil~lPlt~~T~~li~~ 116 (274)
.+|||||+|.||+. +++.++. -+++++.+.++.. +.. +...|+.. .+++++..++|+|++++|........ .
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~--~ 83 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVV--S 83 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHHH--H
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHHH--H
Confidence 58999999999997 8888865 4676664444444 333 34456654 37777767899999999964332222 1
Q ss_pred HHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhheeeh
Q psy3240 117 ARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 117 ~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
.. ++.|. +++.- ....+-+.++|.+..++.|+.+..
T Consensus 84 ~a---l~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~ 121 (319)
T 1tlt_A 84 TL---LNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMV 121 (319)
T ss_dssp HH---HHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HH---HHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 22 34554 56652 334455677888888888876654
No 188
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.84 E-value=5.3e-05 Score=68.90 Aligned_cols=107 Identities=15% Similarity=0.203 Sum_probs=68.7
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh---HhhcCC-c-ccCHHHHh-cccCEEEEcCCCCcccHHhcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE---ADKRGA-E-HTNIDDLC-KQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~---a~~~g~-~-~~sl~ell-~~aDvVil~lPlt~~T~~li~ 115 (274)
.+|||||+|.||+.+++.++.. +++++.+.++..... +...+. . +.++++++ .++|+|++++|...... + -
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~-~-~ 79 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFA-Q-A 79 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHHH-H-H
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHHH-H-H
Confidence 3799999999999999999876 565555555543322 334454 2 34899999 78999999999533222 1 1
Q ss_pred HHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhheee
Q psy3240 116 RARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 116 ~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
... ++.|. +++.- ..-.+-+.++|.+..++.|+.+.
T Consensus 80 ~~a---l~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~ 117 (325)
T 2ho3_A 80 KAA---LSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIF 117 (325)
T ss_dssp HHH---HHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEE
T ss_pred HHH---HHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 223 34444 56653 23344566677777777776544
No 189
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.83 E-value=1.8e-05 Score=71.36 Aligned_cols=114 Identities=14% Similarity=0.182 Sum_probs=74.4
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh--HhhcC----------CcccCHHHHhcccCEEEEcC
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRG----------AEHTNIDDLCKQSDFIIITS 104 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g----------~~~~sl~ell~~aDvVil~l 104 (274)
+.++.|+++.|+|.|.||+++|+.|...| ++++++++..+.. +...+ +...++.+.+.++|+|+.++
T Consensus 123 ~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~a 201 (287)
T 1nvt_A 123 IGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINAT 201 (287)
T ss_dssp HCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECS
T ss_pred CCCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECC
Confidence 34689999999999999999999999999 7766654433222 11111 11123356678899999999
Q ss_pred CCCccc--HH-hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 105 ALTPDT--HH-LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 105 Plt~~T--~~-li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
|..... .. .+. ..+.++++++++|++... ... .+.+..++.|+.+++
T Consensus 202 g~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p-~~t-~ll~~a~~~G~~~~~ 251 (287)
T 1nvt_A 202 PIGMYPNIDVEPIV--KAEKLREDMVVMDLIYNP-LET-VLLKEAKKVNAKTIN 251 (287)
T ss_dssp CTTCTTCCSSCCSS--CSTTCCSSSEEEECCCSS-SSC-HHHHHHHTTTCEEEC
T ss_pred CCCCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC-ccC-HHHHHHHHCCCEEeC
Confidence 865321 00 120 135678999999998753 222 455666666766554
No 190
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.81 E-value=2.2e-05 Score=72.63 Aligned_cols=115 Identities=11% Similarity=0.209 Sum_probs=76.0
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCC---Chh--Hhh----cCC--ccc---C---HHHHhcccC
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSK---KPE--ADK----RGA--EHT---N---IDDLCKQSD 98 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~---~~~--a~~----~g~--~~~---s---l~ell~~aD 98 (274)
|.+++||++.|+|.|.+|+++|..|...|+ ++++++++.. +.+ +.+ .+. ... + +.+.++++|
T Consensus 149 ~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 149 GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 567999999999999999999999999999 4555554421 111 111 121 111 2 456678999
Q ss_pred EEEEcCCCC--cccH-HhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 99 FIIITSALT--PDTH-HLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 99 vVil~lPlt--~~T~-~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
+|+.++|.. +... ..+. ..+.++++.+++|+.-... +..|++.-+++|+..+|
T Consensus 229 iIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P~--~T~ll~~A~~~G~~~~~ 284 (315)
T 3tnl_A 229 IFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKPT--KTRLLEIAEEQGCQTLN 284 (315)
T ss_dssp EEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSSS--SCHHHHHHHHTTCEEEC
T ss_pred EEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCCC--CCHHHHHHHHCCCeEeC
Confidence 999999964 2111 1121 2345688999999976543 34566666777877666
No 191
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.80 E-value=5.9e-05 Score=61.68 Aligned_cols=103 Identities=10% Similarity=0.110 Sum_probs=72.2
Q ss_pred CCEEEEEcc----ChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccH
Q psy3240 42 NSTVGIVGC----GRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 42 gktVGIIGl----G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~ 116 (274)
-++|+|||. |.+|..+++.|+..|++++-.++. ... -.|.... +++|+....|++++++|. +....++.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~--~~~--i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~- 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK--YEE--VLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVE- 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT--CSE--ETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHH-
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCC--CCe--ECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH-
Confidence 689999999 799999999999999963333332 211 1355443 899998899999999996 55666664
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 117 ARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 117 ~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
+..+. ...++++..+. .++++.+..++.|+.++.
T Consensus 96 ~~~~~-gi~~i~~~~g~----~~~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 96 QAIKK-GAKVVWFQYNT----YNREASKKADEAGLIIVA 129 (144)
T ss_dssp HHHHH-TCSEEEECTTC----CCHHHHHHHHHTTCEEEE
T ss_pred HHHHc-CCCEEEECCCc----hHHHHHHHHHHcCCEEEc
Confidence 33332 33456655432 378888888888887763
No 192
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.79 E-value=0.0001 Score=67.54 Aligned_cols=106 Identities=20% Similarity=0.287 Sum_probs=69.7
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCCh-h--HhhcCCc--ccCHHHHhc--ccCEEEEcCCCCcccHHhc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKP-E--ADKRGAE--HTNIDDLCK--QSDFIIITSALTPDTHHLI 114 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~-~--a~~~g~~--~~sl~ell~--~aDvVil~lPlt~~T~~li 114 (274)
.+|||||+|.||+..++.++.. +++++.+.++.... . +...++. +.+++++++ ++|+|++++|........
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~- 81 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELV- 81 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHH-
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHH-
Confidence 4899999999999999999875 66666555554432 2 3445653 358999998 799999999964332222
Q ss_pred cHHHHhcCCCCc-EEEEcC-CCchhcHHHHHhhhhhhhhee
Q psy3240 115 NRARLESMKPGA-ILINTS-RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 115 ~~~~l~~mk~ga-ilINv~-RG~iVde~aL~~~L~~~~i~~ 153 (274)
...+ +.|. +++.-- .-.+-+.++|.+..++.|+.+
T Consensus 82 -~~al---~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~ 118 (344)
T 3ezy_A 82 -IACA---KAKKHVFCEKPLSLNLADVDRMIEETKKADVIL 118 (344)
T ss_dssp -HHHH---HTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCE
T ss_pred -HHHH---hcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcE
Confidence 2333 3343 555532 344456677777777776643
No 193
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.78 E-value=2.9e-05 Score=63.34 Aligned_cols=106 Identities=14% Similarity=0.170 Sum_probs=72.7
Q ss_pred CCCEEEEEcc----ChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhcc
Q psy3240 41 QNSTVGIVGC----GRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 41 ~gktVGIIGl----G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~ 115 (274)
.-++|+|||. |++|..+++.|+..|++++-.++. +....-.|.... +++|+....|++++++|. +....+++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~--~~~~~i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~ 88 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR--FQGEELFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP 88 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG--GTTSEETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCC--cccCcCCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH
Confidence 4578999999 899999999999999963333222 101111355443 899998899999999996 55556664
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 116 RARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 116 ~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
+..+. ...+++++.+.. ++++.+..++.|+.++.
T Consensus 89 -~~~~~-gi~~i~~~~g~~----~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 89 -EVLAL-RPGLVWLQSGIR----HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp -HHHHH-CCSCEEECTTCC----CHHHHHHHHHTTCCEEE
T ss_pred -HHHHc-CCCEEEEcCCcC----HHHHHHHHHHcCCEEEc
Confidence 33332 334666665432 57888888888887764
No 194
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.78 E-value=8.6e-05 Score=67.91 Aligned_cols=108 Identities=18% Similarity=0.203 Sum_probs=71.2
Q ss_pred CCEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh---HhhcCCc--ccCHHHHhc--ccCEEEEcCCCCcccHHh
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE---ADKRGAE--HTNIDDLCK--QSDFIIITSALTPDTHHL 113 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~---a~~~g~~--~~sl~ell~--~aDvVil~lPlt~~T~~l 113 (274)
-.+|||||+|.||+..++.++.. +++++.+.++..... +...++. +.+++++++ ++|+|++++|........
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 84 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAA 84 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHH
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHH
Confidence 36899999999999999999875 666665555554332 3455663 348999997 799999999965433222
Q ss_pred ccHHHHhcCCCC-cEEEEcC-CCchhcHHHHHhhhhhhhheee
Q psy3240 114 INRARLESMKPG-AILINTS-RGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 114 i~~~~l~~mk~g-ailINv~-RG~iVde~aL~~~L~~~~i~~~ 154 (274)
...++ .| .+++.-- .-.+-+.++|.+..++.|+.+.
T Consensus 85 --~~al~---~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~ 122 (330)
T 3e9m_A 85 --KLALS---QGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLM 122 (330)
T ss_dssp --HHHHH---TTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEE
T ss_pred --HHHHH---CCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 23333 33 3555432 3444566777777777776544
No 195
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.76 E-value=6.5e-05 Score=69.23 Aligned_cols=107 Identities=14% Similarity=0.221 Sum_probs=70.1
Q ss_pred CCEEEEEccChHHHHHHHHHccC--CCeEEEEeCCCCCh-h--HhhcCCcc-cCHHHHhc--ccCEEEEcCCCCcccHHh
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPY--KVSKFLYTSRSKKP-E--ADKRGAEH-TNIDDLCK--QSDFIIITSALTPDTHHL 113 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~--G~~vv~~~~r~~~~-~--a~~~g~~~-~sl~ell~--~aDvVil~lPlt~~T~~l 113 (274)
-.+|||||+|.||+..++.++.. +++++.+.++.... . +...++.. .+++++++ ++|+|++++|........
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 92 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHPTQS 92 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGHHHHH
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHHHHHH
Confidence 46899999999999999999876 67666555554433 2 34557644 48999997 799999999964332222
Q ss_pred ccHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhhee
Q psy3240 114 INRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 114 i~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~ 153 (274)
...+ +.|. +++.- -...+-+.++|.+..++.|+.+
T Consensus 93 --~~al---~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~ 129 (354)
T 3q2i_A 93 --IECS---EAGFHVMTEKPMATRWEDGLEMVKAADKAKKHL 129 (354)
T ss_dssp --HHHH---HTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCE
T ss_pred --HHHH---HCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 2333 3343 33332 2334456667777777777654
No 196
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.74 E-value=0.00012 Score=67.94 Aligned_cols=107 Identities=13% Similarity=0.132 Sum_probs=70.1
Q ss_pred CCEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh--HhhcCCcc-cCHHHHhc--ccCEEEEcCCCCcccHHhcc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE--ADKRGAEH-TNIDDLCK--QSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~--a~~~g~~~-~sl~ell~--~aDvVil~lPlt~~T~~li~ 115 (274)
..+|||||+|.||+..++.++.. +++++.+.++..... +...|+.. .+++++++ +.|+|++++|........
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~-- 82 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELA-- 82 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHH--
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHH--
Confidence 46899999999999999999876 676665555544332 44566654 48999997 789999999964332222
Q ss_pred HHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhhee
Q psy3240 116 RARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 116 ~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~ 153 (274)
...+ +.|. +++.- -.-.+-+.++|++..++.|+.+
T Consensus 83 ~~al---~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~ 119 (359)
T 3e18_A 83 ISAL---EAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHF 119 (359)
T ss_dssp HHHH---HTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHHH---HCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 2333 3343 44442 1234456667777777766643
No 197
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.74 E-value=6.3e-05 Score=72.73 Aligned_cols=104 Identities=13% Similarity=0.129 Sum_probs=68.5
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhh--------------------cC-Ccc-cCHHHHhccc
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADK--------------------RG-AEH-TNIDDLCKQS 97 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~--------------------~g-~~~-~sl~ell~~a 97 (274)
-+-++|+|||+|-+|..+|..+...|.+++++|....+-+... .| ..+ .+.++.++.|
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a 98 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT 98 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence 3557999999999999999999999998888876543221111 11 122 2678889999
Q ss_pred CEEEEcCCCC------cccHHhcc--HHHHhcC---CCCcEEEEcCCCchhcHHHHH
Q psy3240 98 DFIIITSALT------PDTHHLIN--RARLESM---KPGAILINTSRGQLVDQEALI 143 (274)
Q Consensus 98 DvVil~lPlt------~~T~~li~--~~~l~~m---k~gailINv~RG~iVde~aL~ 143 (274)
|++++|+|.- +....+.. +...+.| .++.++|.-|+..+=-.+.+.
T Consensus 99 d~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~ 155 (444)
T 3vtf_A 99 DATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLV 155 (444)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHH
T ss_pred CceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHH
Confidence 9999999842 12222322 1222334 468899999987664444433
No 198
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.72 E-value=8.5e-05 Score=67.83 Aligned_cols=107 Identities=18% Similarity=0.214 Sum_probs=67.3
Q ss_pred CEEEEEccChHHHHHHHHHc-c-CCCeEEEEeCCCCChh---HhhcCCc--ccCHHHHhc--ccCEEEEcCCCCcccHHh
Q psy3240 43 STVGIVGCGRIGLSVLEKLI-P-YKVSKFLYTSRSKKPE---ADKRGAE--HTNIDDLCK--QSDFIIITSALTPDTHHL 113 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~-~-~G~~vv~~~~r~~~~~---a~~~g~~--~~sl~ell~--~aDvVil~lPlt~~T~~l 113 (274)
.+|||||+|.||+..++.++ . -+++++.+.++..... +...|+. +.+++++++ ++|+|++++|........
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 88 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMT 88 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHHHH
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHHHH
Confidence 58999999999999999987 5 4676555555544322 3445663 348999986 699999999964332222
Q ss_pred ccHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhh-hheee
Q psy3240 114 INRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADI-RVISI 154 (274)
Q Consensus 114 i~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~-~i~~~ 154 (274)
.+.++.|. +++.- .....-+.++|.+..++. |+.+.
T Consensus 89 -----~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~ 127 (346)
T 3cea_A 89 -----IYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQ 127 (346)
T ss_dssp -----HHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEE
T ss_pred -----HHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEE
Confidence 22234554 44431 122334555677776776 66543
No 199
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.71 E-value=7e-05 Score=68.15 Aligned_cols=107 Identities=16% Similarity=0.207 Sum_probs=66.5
Q ss_pred CEEEEEccChHHH-HHHHHHccC-CCeEEEEeCCCCC-hh--HhhcCCc--ccCHHHHh-cccCEEEEcCCCCcccHHhc
Q psy3240 43 STVGIVGCGRIGL-SVLEKLIPY-KVSKFLYTSRSKK-PE--ADKRGAE--HTNIDDLC-KQSDFIIITSALTPDTHHLI 114 (274)
Q Consensus 43 ktVGIIGlG~IG~-~iA~~L~~~-G~~vv~~~~r~~~-~~--a~~~g~~--~~sl~ell-~~aDvVil~lPlt~~T~~li 114 (274)
.+|||||+|.||+ .+++.++.. +.+++ +.++... .. +...++. +.+..+++ .++|+|++++|...... ++
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~-~~ 80 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHST-LA 80 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHH-HH
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHH-HH
Confidence 4799999999999 499988764 66666 4444432 22 3445665 34555566 67999999999533222 11
Q ss_pred cHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhheeeh
Q psy3240 115 NRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 115 ~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
... ++.|. +++.- ..-.+-+.+.|.+..++.|+.+..
T Consensus 81 -~~a---l~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 119 (323)
T 1xea_A 81 -AFF---LHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYV 119 (323)
T ss_dssp -HHH---HHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred -HHH---HHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEE
Confidence 123 34443 66653 223445666788877777775544
No 200
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.70 E-value=0.00011 Score=67.80 Aligned_cols=109 Identities=17% Similarity=0.249 Sum_probs=71.0
Q ss_pred CCCEEEEEccChHHH-HHHHHHccC-CCeEEEEeCCCCC-hh--HhhcCCcc-cCHHHHhc--ccCEEEEcCCCCcccHH
Q psy3240 41 QNSTVGIVGCGRIGL-SVLEKLIPY-KVSKFLYTSRSKK-PE--ADKRGAEH-TNIDDLCK--QSDFIIITSALTPDTHH 112 (274)
Q Consensus 41 ~gktVGIIGlG~IG~-~iA~~L~~~-G~~vv~~~~r~~~-~~--a~~~g~~~-~sl~ell~--~aDvVil~lPlt~~T~~ 112 (274)
+-.+|||||+|.||+ .+++.++.. +++++.+.++... .. +...|+.. .+++|+++ +.|+|++++|.......
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 105 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAEW 105 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHHH
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHHH
Confidence 446899999999999 789988876 6766655444432 22 34557755 48999997 58999999996433222
Q ss_pred hccHHHHhcCCCCc-EEEEcC-CCchhcHHHHHhhhhhhhheee
Q psy3240 113 LINRARLESMKPGA-ILINTS-RGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 113 li~~~~l~~mk~ga-ilINv~-RG~iVde~aL~~~L~~~~i~~~ 154 (274)
. ...++ .|. +++.-- ...+-+.++|++..++.|+.+.
T Consensus 106 ~--~~al~---aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 144 (350)
T 3rc1_A 106 I--DRALR---AGKHVLAEKPLTTDRPQAERLFAVARERGLLLM 144 (350)
T ss_dssp H--HHHHH---TTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred H--HHHHH---CCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 2 23333 332 555432 3345577778887777776443
No 201
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.69 E-value=5.7e-05 Score=68.24 Aligned_cols=108 Identities=16% Similarity=0.225 Sum_probs=73.7
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCCh-h--HhhcCCccc-CHHHHhcccCEEEEcCCCCccc----HH
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKP-E--ADKRGAEHT-NIDDLCKQSDFIIITSALTPDT----HH 112 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~-~--a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T----~~ 112 (274)
.++++.|||.|.+|++++..|...|++.+.+.+|+... + +...+.... ++. +.++|+|+.++|..-.. ..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~ 195 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMD 195 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCC
Confidence 57899999999999999999999998545555555432 2 333343332 222 46899999999975421 11
Q ss_pred -hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 113 -LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 113 -li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
.+..+.+ +++.+++|+.... .. ..|.+.-+++|+.++|
T Consensus 196 ~~~~~~~l---~~~~~v~DlvY~P-~~-T~ll~~A~~~G~~~i~ 234 (271)
T 1npy_A 196 LAFPKAFI---DNASVAFDVVAMP-VE-TPFIRYAQARGKQTIS 234 (271)
T ss_dssp CSSCHHHH---HHCSEEEECCCSS-SS-CHHHHHHHHTTCEEEC
T ss_pred CCCCHHHc---CCCCEEEEeecCC-CC-CHHHHHHHHCCCEEEC
Confidence 1343444 5688999998744 22 3777777888888777
No 202
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.68 E-value=0.00015 Score=66.12 Aligned_cols=107 Identities=14% Similarity=0.184 Sum_probs=67.5
Q ss_pred CCEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCCh-h--HhhcCCc--ccCHHHHhc--ccCEEEEcCCCCcccHHh
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKP-E--ADKRGAE--HTNIDDLCK--QSDFIIITSALTPDTHHL 113 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~-~--a~~~g~~--~~sl~ell~--~aDvVil~lPlt~~T~~l 113 (274)
-.+|||||+|.||+..++.++.. +++++.+.++.... . +...++. +.+++++++ +.|+|++++|........
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 84 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVA 84 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHHHH
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHH
Confidence 35899999999999999998764 45556555544432 2 4455664 358999998 799999999964332222
Q ss_pred ccHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhhee
Q psy3240 114 INRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 114 i~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~ 153 (274)
...+ +.|. +++.- -.-.+-+.++|++..++.|+.+
T Consensus 85 --~~al---~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~ 121 (329)
T 3evn_A 85 --KAAL---LAGKHVLVEKPFTLTYDQANELFALAESCNLFL 121 (329)
T ss_dssp --HHHH---HTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCE
T ss_pred --HHHH---HCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEE
Confidence 2233 3333 44442 2334456667777777777644
No 203
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.64 E-value=7.2e-05 Score=69.08 Aligned_cols=114 Identities=9% Similarity=0.140 Sum_probs=76.1
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCC----hh--Hhh----cCCc--c---cCH---HHHhcccC
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKK----PE--ADK----RGAE--H---TNI---DDLCKQSD 98 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~----~~--a~~----~g~~--~---~sl---~ell~~aD 98 (274)
|.+++|+++.|+|.|.+|++++..|...|++.+...+|+.+ .+ +.+ .+.. . .++ .+.++++|
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 46789999999999999999999999999954444444422 11 111 1221 1 243 55688999
Q ss_pred EEEEcCCCCc--ccHHhc--cHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 99 FIIITSALTP--DTHHLI--NRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 99 vVil~lPlt~--~T~~li--~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
+|+.++|..- .....+ + .+.++++.+++|+.-... +..|++.-+++|+..+|
T Consensus 223 iIINaTp~Gm~~~~~~~~~~~---~~~l~~~~~v~D~vY~P~--~T~ll~~A~~~G~~~~~ 278 (312)
T 3t4e_A 223 ILTNGTKVGMKPLENESLIGD---VSLLRPELLVTECVYNPH--MTKLLQQAQQAGCKTID 278 (312)
T ss_dssp EEEECSSTTSTTSTTCCSCCC---GGGSCTTCEEEECCCSSS--SCHHHHHHHHTTCEEEC
T ss_pred EEEECCcCCCCCCCCCcccCC---HHHcCCCCEEEEeccCCC--CCHHHHHHHHCCCeEEC
Confidence 9999999752 111111 2 234678999999976543 34666667778887766
No 204
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.64 E-value=9.8e-05 Score=67.15 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=45.7
Q ss_pred CEEEEEccChHHHHHHHHHccCC--CeEEEEeCCCCChh--Hhhc---------CCcc--cCHHHHhcccCEEEEcCCCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYK--VSKFLYTSRSKKPE--ADKR---------GAEH--TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G--~~vv~~~~r~~~~~--a~~~---------g~~~--~sl~ell~~aDvVil~lPlt 107 (274)
++|+|||.|.||..+|..|...| .++++++.+..+.. .... .... .++ +.++.||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 58999999999999999998777 55666665433222 1111 1222 356 7789999999999964
Q ss_pred c
Q psy3240 108 P 108 (274)
Q Consensus 108 ~ 108 (274)
.
T Consensus 81 ~ 81 (309)
T 1hyh_A 81 K 81 (309)
T ss_dssp G
T ss_pred c
Confidence 3
No 205
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.64 E-value=8.8e-05 Score=67.79 Aligned_cols=103 Identities=15% Similarity=0.222 Sum_probs=64.6
Q ss_pred CCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChhHh--h---------cC--Ccc-cCHHHHhcccCEEEEcCCC
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPEAD--K---------RG--AEH-TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~a~--~---------~g--~~~-~sl~ell~~aDvVil~lPl 106 (274)
.++|+|||.|.||..+|..|...|. ++++++.+....... . .. +.. .++ +.++.||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999988787 777777654322210 0 01 122 356 778999999999942
Q ss_pred Cc-----------ccHHhcc--HHHHhcCCCCcEEEEcCCCchhcHHHHHhh
Q psy3240 107 TP-----------DTHHLIN--RARLESMKPGAILINTSRGQLVDQEALIDF 145 (274)
Q Consensus 107 t~-----------~T~~li~--~~~l~~mk~gailINv~RG~iVde~aL~~~ 145 (274)
.. .+..++. .+.+....|++++++++-..-+....+.+.
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~ 134 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKV 134 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHh
Confidence 21 1111111 012233357999999986554545555553
No 206
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.63 E-value=5.2e-05 Score=69.03 Aligned_cols=96 Identities=18% Similarity=0.258 Sum_probs=60.8
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc----------CH-HHHhcccCEEEEcCCCCccc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT----------NI-DDLCKQSDFIIITSALTPDT 110 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~----------sl-~ell~~aDvVil~lPlt~~T 110 (274)
++|+|||.|.||..+|..|. .|.++.+++++....+ ..+.|.... +. ++....+|+|++++|.. .+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~-~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH-QL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG-GH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH-HH
Confidence 68999999999999999999 8987666654432222 333343221 11 34567899999999953 44
Q ss_pred HHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHh
Q psy3240 111 HHLINRARLESMKPGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 111 ~~li~~~~l~~mk~gailINv~RG~iVde~aL~~ 144 (274)
..++ +.++.+.+++ +|.+.-|=- .++.+.+
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nGi~-~~e~l~~ 110 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNGMG-HIHDLKD 110 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSSSH-HHHHHHT
T ss_pred HHHH--HHhhcCCCCe-EEEecCCcc-HHHHHHH
Confidence 4444 3344455666 777765532 2334444
No 207
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.60 E-value=2e-05 Score=71.13 Aligned_cols=91 Identities=18% Similarity=0.127 Sum_probs=62.2
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCc---c-cCHHHHh-cccCEEEEcCCCCcccHHhccH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAE---H-TNIDDLC-KQSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~---~-~sl~ell-~~aDvVil~lPlt~~T~~li~~ 116 (274)
++|+|||.|.||..+|..|...|.++.+++++..... ....|.. . .+..+.+ +.+|+|++++|.. .++.++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l~- 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVIP- 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHGG-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHHH-
Confidence 6899999999999999999988887777776533221 1122321 1 1334444 7899999999964 4555553
Q ss_pred HHHhcCCCCcEEEEcCCCc
Q psy3240 117 ARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 117 ~~l~~mk~gailINv~RG~ 135 (274)
+..+.+++++++|.+.-|=
T Consensus 81 ~l~~~l~~~~~iv~~~nGi 99 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGY 99 (294)
T ss_dssp GHHHHEEEEEEEEECCSSC
T ss_pred HHHHhhCCCCEEEEeccCc
Confidence 3334467888999887764
No 208
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.60 E-value=5.4e-05 Score=68.66 Aligned_cols=107 Identities=13% Similarity=0.202 Sum_probs=67.3
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh--HhhcCCc-ccCHHHHhc--ccCEEEEcCCCCcccHHhccH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE--ADKRGAE-HTNIDDLCK--QSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~--a~~~g~~-~~sl~ell~--~aDvVil~lPlt~~T~~li~~ 116 (274)
.+|||||+|.||+.+++.++.. +.+++.+.++..... ..+. +. +.+++++++ ++|+|++++|.......+ .
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~--~ 87 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATHAEIT--L 87 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGHHHHH--H
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHHHHHH--H
Confidence 5899999999999999999875 565554444433221 1111 33 348899986 799999999964332211 1
Q ss_pred HHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhheeeh
Q psy3240 117 ARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 117 ~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
+ .++.|. +++.- ..-.+-+.++|.+..++.|+.+..
T Consensus 88 ~---al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~ 125 (315)
T 3c1a_A 88 A---AIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWV 125 (315)
T ss_dssp H---HHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEE
T ss_pred H---HHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 2 244554 56662 233445667788877777775543
No 209
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.55 E-value=9.5e-05 Score=75.65 Aligned_cols=100 Identities=22% Similarity=0.289 Sum_probs=70.8
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhh---------------cC---C----cccCHHHHhcccC
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADK---------------RG---A----EHTNIDDLCKQSD 98 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~---------------~g---~----~~~sl~ell~~aD 98 (274)
=++|||||.|.||..+|..+...|+.|+++|....... ..+ .. . ...+..+.+++||
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD 395 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVD 395 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCS
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCC
Confidence 37999999999999999999999998888876543211 000 00 0 1122234578999
Q ss_pred EEEEcCCCCcccHHhccHHHHhcCCCCcEEE-EcCCCchhcHHHHHh
Q psy3240 99 FIIITSALTPDTHHLINRARLESMKPGAILI-NTSRGQLVDQEALID 144 (274)
Q Consensus 99 vVil~lPlt~~T~~li~~~~l~~mk~gailI-Nv~RG~iVde~aL~~ 144 (274)
+|+=++|-.-+.+.-+-++.=+.++++++|- |+|+ +....|.+
T Consensus 396 lVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs---l~i~~ia~ 439 (742)
T 3zwc_A 396 LVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA---LNVDDIAS 439 (742)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS---SCHHHHHT
T ss_pred EEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc---CChHHHHh
Confidence 9999999888887766667777789999884 4554 44455555
No 210
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.53 E-value=0.00029 Score=67.97 Aligned_cols=94 Identities=20% Similarity=0.264 Sum_probs=69.0
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCC---eEEEEe----CC----CCCh---h-------HhhcCC--cccCHHHH
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKV---SKFLYT----SR----SKKP---E-------ADKRGA--EHTNIDDL 93 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~---~vv~~~----~r----~~~~---~-------a~~~g~--~~~sl~el 93 (274)
|.+++++++.|+|.|..|+++++.|...|+ ++++++ ++ .... . +...+. ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 567899999999999999999999999998 566666 43 1111 1 000111 12368899
Q ss_pred hcccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 94 CKQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 94 l~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
++.+|+|+.+.|..+ +++.++.++.|+++.++++++.
T Consensus 261 l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLyn 297 (439)
T 2dvm_A 261 LKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLAN 297 (439)
T ss_dssp HTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCS
T ss_pred hccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCC
Confidence 999999999998632 3344567788999999999954
No 211
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.51 E-value=0.00034 Score=63.86 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=69.2
Q ss_pred CEEEEEccChHHHHHHHHHccCC---CeEEEEeCCCCChh---HhhcCCc--ccCHHHHhc--ccCEEEEcCCCCcccHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYK---VSKFLYTSRSKKPE---ADKRGAE--HTNIDDLCK--QSDFIIITSALTPDTHH 112 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G---~~vv~~~~r~~~~~---a~~~g~~--~~sl~ell~--~aDvVil~lPlt~~T~~ 112 (274)
.+|||||+|.||+..++.++... ++++.+.++..... +...++. +.+++++++ +.|+|++++|.......
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~ 82 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAA 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHH
Confidence 48999999999999999998653 45666655554322 4456663 358999997 69999999996433222
Q ss_pred hccHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhheee
Q psy3240 113 LINRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 113 li~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
-...++ .|. +++.- -.-.+-+.++|++..+++|+.+.
T Consensus 83 --~~~al~---~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~ 121 (334)
T 3ohs_X 83 --VMLCLA---AGKAVLCEKPMGVNAAEVREMVTEARSRGLFLM 121 (334)
T ss_dssp --HHHHHH---TTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEE
T ss_pred --HHHHHh---cCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 223333 332 45542 23344566777777777776443
No 212
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.51 E-value=0.00027 Score=65.62 Aligned_cols=106 Identities=11% Similarity=0.197 Sum_probs=66.4
Q ss_pred CEEEEEccChHHHH-HHHHHccC-CCeEEEEeCCCCChhHhhc-CCcc-cCHHHHhc--ccCEEEEcCCCCcccHHhccH
Q psy3240 43 STVGIVGCGRIGLS-VLEKLIPY-KVSKFLYTSRSKKPEADKR-GAEH-TNIDDLCK--QSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 43 ktVGIIGlG~IG~~-iA~~L~~~-G~~vv~~~~r~~~~~a~~~-g~~~-~sl~ell~--~aDvVil~lPlt~~T~~li~~ 116 (274)
.+|||||+|.||+. .++.++.. +++++.+.++......... +... .+++++++ +.|+|++++|........ .
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~--~ 85 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPLA--R 85 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHHH--H
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHHH--H
Confidence 58999999999997 77777765 6766666665543322233 3433 48999998 789999999964333222 2
Q ss_pred HHHhcCCCCcEEEEcC--CCchhcHHHHHhhhhhhhhee
Q psy3240 117 ARLESMKPGAILINTS--RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 117 ~~l~~mk~gailINv~--RG~iVde~aL~~~L~~~~i~~ 153 (274)
.. ++.|.-++--- .-.+-+.++|++..++.|+.+
T Consensus 86 ~a---l~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 121 (364)
T 3e82_A 86 LA---LNAGKHVVVDKPFTLDMQEARELIALAEEKQRLL 121 (364)
T ss_dssp HH---HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCE
T ss_pred HH---HHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 23 33444333322 234456667777777766643
No 213
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.50 E-value=0.00046 Score=63.84 Aligned_cols=109 Identities=20% Similarity=0.185 Sum_probs=70.1
Q ss_pred CCCCEEEEEccChHHHHHHHHHc-c-CCCeEEEEeCCCCCh-h--HhhcC--Cc-ccCHHHHhc--ccCEEEEcCCCCcc
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLI-P-YKVSKFLYTSRSKKP-E--ADKRG--AE-HTNIDDLCK--QSDFIIITSALTPD 109 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~-~-~G~~vv~~~~r~~~~-~--a~~~g--~~-~~sl~ell~--~aDvVil~lPlt~~ 109 (274)
....+|||||+|.||+..++.++ . -+++++.+.++.... . +...+ .. +.+++++++ +.|+|++++|....
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 100 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAH 100 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 34468999999999999999997 4 467666555554433 2 44556 33 348999987 48999999996443
Q ss_pred cHHhccHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhhee
Q psy3240 110 THHLINRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 110 T~~li~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~ 153 (274)
.... ...+ +.|. +++.- -.-.+-+.++|++..++.|+.+
T Consensus 101 ~~~~--~~al---~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 101 ADVA--VAAL---NANKYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp HHHH--HHHH---HTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred HHHH--HHHH---HCCCCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 3222 2333 3343 44432 2334456677888777777643
No 214
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.50 E-value=0.00041 Score=63.53 Aligned_cols=106 Identities=13% Similarity=0.172 Sum_probs=69.3
Q ss_pred CEEEEEccChHHHHHHHHHc-c-CCCeEEEEeCCCCCh-h--HhhcC--Cc-ccCHHHHhcc--cCEEEEcCCCCcccHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLI-P-YKVSKFLYTSRSKKP-E--ADKRG--AE-HTNIDDLCKQ--SDFIIITSALTPDTHH 112 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~-~-~G~~vv~~~~r~~~~-~--a~~~g--~~-~~sl~ell~~--aDvVil~lPlt~~T~~ 112 (274)
.+|||||+|.||+..++.++ . -+++++.+.++.... . +...+ .. +.++++++++ .|+|++++|.......
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 82 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHESS 82 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHHH
Confidence 48999999999999999998 5 467666555554432 2 34556 33 3489999976 8999999996443322
Q ss_pred hccHHHHhcCCCCc-EEEEcC-CCchhcHHHHHhhhhhhhhee
Q psy3240 113 LINRARLESMKPGA-ILINTS-RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 113 li~~~~l~~mk~ga-ilINv~-RG~iVde~aL~~~L~~~~i~~ 153 (274)
. ...+ +.|. +++.-- .-.+-+.++|++..++.|+.+
T Consensus 83 ~--~~al---~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 83 V--LKAI---KAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp H--HHHH---HTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred H--HHHH---HCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 2 2333 3443 444322 334456677888777777744
No 215
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.49 E-value=0.00049 Score=62.72 Aligned_cols=106 Identities=10% Similarity=0.074 Sum_probs=67.7
Q ss_pred CEEEEEccChHHH-HHHHHHccCCCeEEEEeCCCC-Chh--Hhhc-CCcc-cCHHHHhc--ccCEEEEcCCCCcccHHhc
Q psy3240 43 STVGIVGCGRIGL-SVLEKLIPYKVSKFLYTSRSK-KPE--ADKR-GAEH-TNIDDLCK--QSDFIIITSALTPDTHHLI 114 (274)
Q Consensus 43 ktVGIIGlG~IG~-~iA~~L~~~G~~vv~~~~r~~-~~~--a~~~-g~~~-~sl~ell~--~aDvVil~lPlt~~T~~li 114 (274)
.+|||||+|.+|. .+++.++..+++++.+.++.. +.. +... +... .+++++++ +.|+|++++|........
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~- 83 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAELA- 83 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHHHH-
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHHHH-
Confidence 5899999999996 677777766887665555444 333 3444 3433 48999997 689999999964332222
Q ss_pred cHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhhee
Q psy3240 115 NRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 115 ~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~ 153 (274)
...++.|. +++.- ..-.+-+.++|++..++.|+.+
T Consensus 84 ----~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (336)
T 2p2s_A 84 ----LRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKF 120 (336)
T ss_dssp ----HHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCE
T ss_pred ----HHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 22334454 56653 2334456667777777777644
No 216
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.47 E-value=0.00013 Score=66.89 Aligned_cols=90 Identities=24% Similarity=0.344 Sum_probs=56.8
Q ss_pred CEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hh--hc------CCc--ccCHHHHhcccCEEEEcCCCCc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--AD--KR------GAE--HTNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~--~~------g~~--~~sl~ell~~aDvVil~lPlt~ 108 (274)
++|+|||.|.||..+|..|...|. ++++++....+.. .. .. ... ..+ .+.++.||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 489999999999999999987777 7777776533222 11 10 111 124 456789999999999643
Q ss_pred c---cH--------HhccHH---HHhcCCCCcEEEEcCCC
Q psy3240 109 D---TH--------HLINRA---RLESMKPGAILINTSRG 134 (274)
Q Consensus 109 ~---T~--------~li~~~---~l~~mk~gailINv~RG 134 (274)
. ++ .++ .+ .+....|++++|+++-+
T Consensus 80 ~~g~~r~dl~~~n~~i~-~~i~~~i~~~~~~~~ii~~tNp 118 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVM-KEIARNVSKYAPDSIVIVVTNP 118 (319)
T ss_dssp CSSCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECSSS
T ss_pred CCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEeCCc
Confidence 2 11 111 12 22222578899887543
No 217
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.47 E-value=0.00029 Score=57.01 Aligned_cols=89 Identities=8% Similarity=0.050 Sum_probs=57.3
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCC-h-h-H--hhcCCcc-----c---CHHHH-hcccCEEEEcCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKK-P-E-A--DKRGAEH-----T---NIDDL-CKQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~-~-~-a--~~~g~~~-----~---sl~el-l~~aDvVil~lPl 106 (274)
..+++.|+|+|.+|+.+++.|...|.++++.+++... . . . ...++.. . .+.++ +..+|.|+++++.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 3568999999999999999999999988888875321 1 1 1 1223322 1 24444 7889999999987
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEc
Q psy3240 107 TPDTHHLINRARLESMKPGAILINT 131 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv 131 (274)
.+.+ +.-....+.+.+...+|..
T Consensus 82 d~~n--~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 82 DADN--AFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp HHHH--HHHHHHHHHHTSSSCEEEE
T ss_pred hHHH--HHHHHHHHHHCCCCEEEEE
Confidence 5433 3323445555444444443
No 218
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.47 E-value=0.00038 Score=64.22 Aligned_cols=107 Identities=16% Similarity=0.241 Sum_probs=68.9
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCCh-h--HhhcCC----c-ccCHHHHhc--ccCEEEEcCCCCcccH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKP-E--ADKRGA----E-HTNIDDLCK--QSDFIIITSALTPDTH 111 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~-~--a~~~g~----~-~~sl~ell~--~aDvVil~lPlt~~T~ 111 (274)
.+|||||+|.||+..++.++.. +++++.+.++.... . +...++ . +.+++++++ ++|+|++++|......
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 86 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVE 86 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHHH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHHH
Confidence 5899999999999999998865 56655555554432 2 344453 2 348999986 5999999999543222
Q ss_pred HhccHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhheee
Q psy3240 112 HLINRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 112 ~li~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
+ ....++.|. +++.- -.-.+-+.++|.+..++.|+.+.
T Consensus 87 -~----~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~ 126 (362)
T 1ydw_A 87 -W----AIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIM 126 (362)
T ss_dssp -H----HHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEE
T ss_pred -H----HHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 1 122345555 44442 12334466788887778787654
No 219
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.46 E-value=0.00024 Score=67.79 Aligned_cols=108 Identities=18% Similarity=0.220 Sum_probs=69.0
Q ss_pred CCEEEEEccChHHH-HHHHHHccC-CCeEEEEeCCCCCh-h--HhhcCCc------ccCHHHHhc--ccCEEEEcCCCCc
Q psy3240 42 NSTVGIVGCGRIGL-SVLEKLIPY-KVSKFLYTSRSKKP-E--ADKRGAE------HTNIDDLCK--QSDFIIITSALTP 108 (274)
Q Consensus 42 gktVGIIGlG~IG~-~iA~~L~~~-G~~vv~~~~r~~~~-~--a~~~g~~------~~sl~ell~--~aDvVil~lPlt~ 108 (274)
-.+|||||+|.||+ .+++.++.. +++++.+.++.... . +...|+. +.+++++++ +.|+|++++|...
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~ 162 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSL 162 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchh
Confidence 35899999999997 899988765 56555555554432 2 3445653 348999987 7999999999643
Q ss_pred ccHHhccHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhheee
Q psy3240 109 DTHHLINRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
..... ... ++.|. +++.- -.-.+-+.++|.+..++.|+.+.
T Consensus 163 h~~~~--~~a---l~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~ 205 (433)
T 1h6d_A 163 HAEFA--IRA---FKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLM 205 (433)
T ss_dssp HHHHH--HHH---HHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHH--HHH---HHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEE
Confidence 32222 223 34444 55542 22334456677777777776554
No 220
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.43 E-value=0.00036 Score=63.53 Aligned_cols=103 Identities=19% Similarity=0.169 Sum_probs=62.6
Q ss_pred CCEEEEEccChHHHHHHHHHcc-CCCeEEEEeCCCCChhHhhcCCcc---cCHHHHhcccCEEEEcCCCCcccHHhccHH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIP-YKVSKFLYTSRSKKPEADKRGAEH---TNIDDLCKQSDFIIITSALTPDTHHLINRA 117 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~-~G~~vv~~~~r~~~~~a~~~g~~~---~sl~ell~~aDvVil~lPlt~~T~~li~~~ 117 (274)
-.+|||||+|+||+.+++.++. -+++++...++..... ...|+.+ .++.+. .++|+|++|+|...... .
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~-~~~g~~~~~~~~l~~~-~~~DvViiatp~~~h~~-----~ 81 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEV-PFELQPFRVVSDIEQL-ESVDVALVCSPSREVER-----T 81 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC--------CCTTSCEESSGGGS-SSCCEEEECSCHHHHHH-----H
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHH-HHcCCCcCCHHHHHhC-CCCCEEEECCCchhhHH-----H
Confidence 4589999999999999999986 4666664444443322 2245442 245444 68999999999533222 1
Q ss_pred HHhcCCCCcEEEEcCC--C-chhcHHHHHhhhhhhhh
Q psy3240 118 RLESMKPGAILINTSR--G-QLVDQEALIDFIADIRV 151 (274)
Q Consensus 118 ~l~~mk~gailINv~R--G-~iVde~aL~~~L~~~~i 151 (274)
....++.|.-+++..- + ...+.+.|.+..++.|+
T Consensus 82 ~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~ 118 (304)
T 3bio_A 82 ALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGA 118 (304)
T ss_dssp HHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCC
Confidence 2233566777777532 2 22355677777777664
No 221
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.43 E-value=0.00057 Score=62.07 Aligned_cols=109 Identities=16% Similarity=0.122 Sum_probs=70.5
Q ss_pred CCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcc-cCHHHHhc--ccCEEEEcCCCCcccHHhccHH
Q psy3240 42 NSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEH-TNIDDLCK--QSDFIIITSALTPDTHHLINRA 117 (274)
Q Consensus 42 gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~-~sl~ell~--~aDvVil~lPlt~~T~~li~~~ 117 (274)
..+|+|+|+ |+||+..++.++..|++.+...++... .....|+.. .+++|+.. ..|++++++|.. ....++. +
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~-g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~-~~~~~~~-e 83 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG-GTTHLGLPVFNTVREAVAATGATASVIYVPAP-FCKDSIL-E 83 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-TCEETTEEEESSHHHHHHHHCCCEEEECCCGG-GHHHHHH-H
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc-cceeCCeeccCCHHHHhhcCCCCEEEEecCHH-HHHHHHH-H
Confidence 468999999 999999999998889864433333211 011245543 48999988 899999999953 3444443 2
Q ss_pred HHhcCCCCcEEEEcCCCc-hhcHHHHHhhhhhhhheeeh
Q psy3240 118 RLESMKPGAILINTSRGQ-LVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 118 ~l~~mk~gailINv~RG~-iVde~aL~~~L~~~~i~~~D 155 (274)
.++. ... .+|..+.|- .-+.+.|.+..++.|+.++.
T Consensus 84 a~~~-Gi~-~iVi~t~G~~~~~~~~l~~~A~~~gv~liG 120 (288)
T 2nu8_A 84 AIDA-GIK-LIITITEGIPTLDMLTVKVKLDEAGVRMIG 120 (288)
T ss_dssp HHHT-TCS-EEEECCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred HHHC-CCC-EEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 3332 222 344455543 33566888888888886653
No 222
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.43 E-value=0.00036 Score=66.52 Aligned_cols=97 Identities=14% Similarity=0.211 Sum_probs=74.5
Q ss_pred CCCCCCCCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCC-------CChh------HhhcCC--cccCHHHHhcccC
Q psy3240 35 MCGPALQNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRS-------KKPE------ADKRGA--EHTNIDDLCKQSD 98 (274)
Q Consensus 35 ~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~-------~~~~------a~~~g~--~~~sl~ell~~aD 98 (274)
..|..+...+|.|+|.|..|..+|+.+.++|. +++++|++- .... +..... ...+|+|+++.+|
T Consensus 181 l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~AD 260 (398)
T 2a9f_A 181 LLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGAD 260 (398)
T ss_dssp TTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTC
T ss_pred HhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCC
Confidence 45778999999999999999999999999999 667777642 1000 111111 1237999999999
Q ss_pred EEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCch
Q psy3240 99 FIIITSALTPDTHHLINRARLESMKPGAILINTSRGQL 136 (274)
Q Consensus 99 vVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~i 136 (274)
+++=+- ..++++++.++.|+++++++.+|.-..
T Consensus 261 V~IG~S-----apgl~T~EmVk~Ma~~pIIfalsNPt~ 293 (398)
T 2a9f_A 261 IFIGVS-----APGVLKAEWISKMAARPVIFAMANPIP 293 (398)
T ss_dssp SEEECC-----STTCCCHHHHHTSCSSCEEEECCSSSC
T ss_pred EEEecC-----CCCCCCHHHHHhhCCCCEEEECCCCCc
Confidence 988752 248899999999999999999998653
No 223
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.41 E-value=0.00032 Score=60.06 Aligned_cols=88 Identities=14% Similarity=0.091 Sum_probs=57.0
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh--HhhcCCcc-----c---CHHHH-hcccCEEEEcCCCCcccH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRGAEH-----T---NIDDL-CKQSDFIIITSALTPDTH 111 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g~~~-----~---sl~el-l~~aDvVil~lPlt~~T~ 111 (274)
++|.|+|+|.+|+.+|+.|...|.++++++.+..... ....+... . .+.++ +.++|+|++++|....+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n- 79 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN- 79 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH-
Confidence 4799999999999999999999998888886544332 22334432 1 23443 67899999999875433
Q ss_pred HhccHHHHhcCCCCcEEEEcC
Q psy3240 112 HLINRARLESMKPGAILINTS 132 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~ 132 (274)
++-......+.+...+|-..
T Consensus 80 -~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 80 -LFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp -HHHHHHHHHTSCCCEEEECC
T ss_pred -HHHHHHHHHHcCCCeEEEEE
Confidence 23233444444444454433
No 224
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.39 E-value=0.00034 Score=64.18 Aligned_cols=100 Identities=15% Similarity=0.170 Sum_probs=61.0
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChhHhhcCCcc-cCHHHHhcccCEEEEcCCCCcccHHhccHHHHh
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPEADKRGAEH-TNIDDLCKQSDFIIITSALTPDTHHLINRARLE 120 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~a~~~g~~~-~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~ 120 (274)
.+|+|||+|+||+.+++.+... +++.+...++....... .++.. .++++++.++|+|++++|...... ....
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~-~gv~~~~d~~~ll~~~DvViiatp~~~h~~-----~~~~ 77 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK-TPVFDVADVDKHADDVDVLFLCMGSATDIP-----EQAP 77 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS-SCEEEGGGGGGTTTTCSEEEECSCTTTHHH-----HHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhc-CCCceeCCHHHHhcCCCEEEEcCCcHHHHH-----HHHH
Confidence 4799999999999999999876 56655444333221211 34432 377888888999999998643322 2233
Q ss_pred cCCCCcEEEEcCCCch--hcH-HHHHhhhhh
Q psy3240 121 SMKPGAILINTSRGQL--VDQ-EALIDFIAD 148 (274)
Q Consensus 121 ~mk~gailINv~RG~i--Vde-~aL~~~L~~ 148 (274)
.++.|.-+|...-..+ -+. +.|.+..++
T Consensus 78 al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~ 108 (320)
T 1f06_A 78 KFAQFACTVDTYDNHRDIPRHRQVMNEAATA 108 (320)
T ss_dssp HHTTTSEEECCCCCGGGHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEECCCCcCCHHHHHHHHHHHHHh
Confidence 4566776666544332 222 345554443
No 225
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.38 E-value=0.00084 Score=62.04 Aligned_cols=107 Identities=15% Similarity=0.216 Sum_probs=67.7
Q ss_pred CCEEEEEccChHHHH-HHHHHccC-CCeEEEEeCCCCChhHhhc-CCcc-cCHHHHhcc--cCEEEEcCCCCcccHHhcc
Q psy3240 42 NSTVGIVGCGRIGLS-VLEKLIPY-KVSKFLYTSRSKKPEADKR-GAEH-TNIDDLCKQ--SDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 42 gktVGIIGlG~IG~~-iA~~L~~~-G~~vv~~~~r~~~~~a~~~-g~~~-~sl~ell~~--aDvVil~lPlt~~T~~li~ 115 (274)
-.+|||||+|.||+. .+..++.. +++++.+.++.....+... +... .+++++++. .|+|++++|....... -
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~--~ 82 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEY--A 82 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHHH--H
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHH--H
Confidence 358999999999997 77777665 6766666665554433334 3433 489999987 8999999996433222 2
Q ss_pred HHHHhcCCCC-cEEEEcC-CCchhcHHHHHhhhhhhhhee
Q psy3240 116 RARLESMKPG-AILINTS-RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 116 ~~~l~~mk~g-ailINv~-RG~iVde~aL~~~L~~~~i~~ 153 (274)
...++ .| .+++.-- .-.+-+.++|++..++.|+.+
T Consensus 83 ~~al~---aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~ 119 (362)
T 3fhl_A 83 GMALE---AGKNVVVEKPFTSTTKQGEELIALAKKKGLML 119 (362)
T ss_dssp HHHHH---TTCEEEEESSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHHHH---CCCeEEEecCCCCCHHHHHHHHHHHHHcCCEE
Confidence 23333 33 3444422 234456667777776666643
No 226
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.38 E-value=0.00055 Score=63.25 Aligned_cols=92 Identities=17% Similarity=0.275 Sum_probs=59.6
Q ss_pred CCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChhH--h---h----cC--C--cc-cCHHHHhcccCEEEEcC--
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPEA--D---K----RG--A--EH-TNIDDLCKQSDFIIITS-- 104 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~a--~---~----~g--~--~~-~sl~ell~~aDvVil~l-- 104 (274)
.++|+|||.|.+|..+|..|...|. +++.+|....+.+. . . .+ . .. .++++.++.||+|++++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 4689999999999999999987776 76677665432221 1 0 11 1 12 37888899999999999
Q ss_pred CCCccc------HH--------hcc--HHHHhcCCCCcEEEEcCC
Q psy3240 105 ALTPDT------HH--------LIN--RARLESMKPGAILINTSR 133 (274)
Q Consensus 105 Plt~~T------~~--------li~--~~~l~~mk~gailINv~R 133 (274)
|..+.. +- ++. .+.+....|.+++|+++-
T Consensus 89 p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 133 (331)
T 1pzg_A 89 TKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTN 133 (331)
T ss_dssp SSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 644322 11 111 012333358899998753
No 227
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=97.37 E-value=0.00035 Score=67.59 Aligned_cols=116 Identities=13% Similarity=0.154 Sum_probs=78.1
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCC--------hh-------------------HhhcCCcccC
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKK--------PE-------------------ADKRGAEHTN 89 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~--------~~-------------------a~~~g~~~~s 89 (274)
|.+|+|+||.|=|+|++|..+|+.|...|+++++.++.... .+ +...++.+.+
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~ 309 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE 309 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec
Confidence 56899999999999999999999999999988776543310 00 1112333333
Q ss_pred HHHHh-cccCEEEEcCCCCcccHHhccHHHHhcCCCC--cEEEEcCCCchhcHHHHHhhhhhhhheee-hhhcc
Q psy3240 90 IDDLC-KQSDFIIITSALTPDTHHLINRARLESMKPG--AILINTSRGQLVDQEALIDFIADIRVISI-SMVTN 159 (274)
Q Consensus 90 l~ell-~~aDvVil~lPlt~~T~~li~~~~l~~mk~g--ailINv~RG~iVde~aL~~~L~~~~i~~~-D~~~~ 159 (274)
-++++ ..|||.+-|. +.+.|+.+..++++.+ .++++-+-+.+-.+ | .+.|.++||.++ |.+.|
T Consensus 310 ~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~e-A-~~iL~~rGIl~~PD~~aN 376 (450)
T 4fcc_A 310 GQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTTIE-A-TELFQQAGVLFAPGKAAN 376 (450)
T ss_dssp TCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHH-H-HHHHHHTTCEEECHHHHT
T ss_pred CcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCCHH-H-HHHHHHCCCEEEChHHhc
Confidence 33333 3699988765 3456888877777643 57888777775433 3 356788888766 55443
No 228
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.37 E-value=0.00055 Score=61.81 Aligned_cols=117 Identities=12% Similarity=0.162 Sum_probs=83.3
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh---Hhhc-----CCcccCHHHHhcccCEEEEcCCCCc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE---ADKR-----GAEHTNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~---a~~~-----g~~~~sl~ell~~aDvVil~lPlt~ 108 (274)
|.+++++++.|+|.|-.+++++..|...|++.+...+|+.... +... ........+.++++|+|+.++|..-
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm 199 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGM 199 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTC
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcccc
Confidence 5678999999999999999999999999987666666665332 1111 1111223344678999999999753
Q ss_pred c--cHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 109 D--THHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 109 ~--T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
. ..--++...++.++++.++.|+--... +..|++.-+++|+..+|
T Consensus 200 ~~~~~~p~~~~~~~~l~~~~~v~D~vY~P~--~T~ll~~A~~~G~~~~~ 246 (269)
T 3tum_A 200 GTRAELPLSAALLATLQPDTLVADVVTSPE--ITPLLNRARQVGCRIQT 246 (269)
T ss_dssp STTCCCSSCHHHHHTCCTTSEEEECCCSSS--SCHHHHHHHHHTCEEEC
T ss_pred CCCCCCCCChHHHhccCCCcEEEEEccCCC--CCHHHHHHHHCcCEEEC
Confidence 2 212356778889999999999976542 34667777788887776
No 229
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.37 E-value=0.00049 Score=63.16 Aligned_cols=106 Identities=12% Similarity=0.161 Sum_probs=65.3
Q ss_pred CEEEEEccChHHHH-HHH-HHcc-CCCeEEEEeCCCCCh-h-H-hhcCCcc-cCHHHHhcc--cCEEEEcCCCCcccHHh
Q psy3240 43 STVGIVGCGRIGLS-VLE-KLIP-YKVSKFLYTSRSKKP-E-A-DKRGAEH-TNIDDLCKQ--SDFIIITSALTPDTHHL 113 (274)
Q Consensus 43 ktVGIIGlG~IG~~-iA~-~L~~-~G~~vv~~~~r~~~~-~-a-~~~g~~~-~sl~ell~~--aDvVil~lPlt~~T~~l 113 (274)
.+|||||+|.||+. .+. .++. -+++++.+.++.... . . ...++.. .+++++++. .|+|++++|........
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 82 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYA 82 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHHHHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHHHHH
Confidence 47999999999996 455 3343 467666555554433 2 2 2234443 489999986 89999999964433222
Q ss_pred ccHHHHhcCCCCcEEEEcC--CCchhcHHHHHhhhhhhhhee
Q psy3240 114 INRARLESMKPGAILINTS--RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 114 i~~~~l~~mk~gailINv~--RG~iVde~aL~~~L~~~~i~~ 153 (274)
...++.|.-++.-- .-.+-+.++|++..++.|+.+
T Consensus 83 -----~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 119 (345)
T 3f4l_A 83 -----KRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTV 119 (345)
T ss_dssp -----HHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCE
T ss_pred -----HHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 22344555555432 234456667777777777644
No 230
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.36 E-value=0.00044 Score=60.94 Aligned_cols=89 Identities=15% Similarity=0.147 Sum_probs=59.8
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh---HhhcCCccc--C-HHHHhcccCEEEEcCCCCcccH
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE---ADKRGAEHT--N-IDDLCKQSDFIIITSALTPDTH 111 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~---a~~~g~~~~--s-l~ell~~aDvVil~lPlt~~T~ 111 (274)
-+|.|++|.|||.|.+|...++.|...|++++++++...... +...++... + .++.+..+|+|+.++.. ++.
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d-~~~- 104 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATND-QAV- 104 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCC-THH-
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCC-HHH-
Confidence 589999999999999999999999999998888876544221 122233322 2 23457789999887543 333
Q ss_pred HhccHHHHhcCCCCcEEEEcC
Q psy3240 112 HLINRARLESMKPGAILINTS 132 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~ 132 (274)
|.......+ -.++||+.
T Consensus 105 ---N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 105 ---NKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp ---HHHHHHHSC-TTCEEEC-
T ss_pred ---HHHHHHHHh-CCCEEEEe
Confidence 333333345 45778874
No 231
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.00022 Score=69.11 Aligned_cols=114 Identities=13% Similarity=0.173 Sum_probs=70.1
Q ss_pred CCCCCCCCEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh--HhhcCCcc-----c---CHHHHhcccCEEEEcC
Q psy3240 36 CGPALQNSTVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE--ADKRGAEH-----T---NIDDLCKQSDFIIITS 104 (274)
Q Consensus 36 ~g~~L~gktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~--a~~~g~~~-----~---sl~ell~~aDvVil~l 104 (274)
.+.++.+++|+|+|.|.+|+.+++.|... |.++++++++..+.. +...++.. . ++.++++.+|+|+.++
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~t 96 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLI 96 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECS
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECC
Confidence 34678899999999999999999999877 676556655433322 11223321 1 3556788999999999
Q ss_pred CCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 105 ALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 105 Plt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
|.... .. +.... +++|..+++++--. -+..++.+..++.|+.+++
T Consensus 97 p~~~~-~~-v~~a~---l~~g~~vvd~~~~~-p~~~~Ll~~Ak~aGv~~i~ 141 (467)
T 2axq_A 97 PYTFH-PN-VVKSA---IRTKTDVVTSSYIS-PALRELEPEIVKAGITVMN 141 (467)
T ss_dssp CGGGH-HH-HHHHH---HHHTCEEEECSCCC-HHHHHHHHHHHHHTCEEEC
T ss_pred chhhh-HH-HHHHH---HhcCCEEEEeecCC-HHHHHHHHHHHHcCCEEEe
Confidence 96422 11 22222 35677888875411 2356777777777876655
No 232
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.34 E-value=0.00019 Score=68.41 Aligned_cols=89 Identities=17% Similarity=0.182 Sum_probs=61.5
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-----C---HHHH-hcccCEEEEcCCCCcccH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-----N---IDDL-CKQSDFIIITSALTPDTH 111 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-----s---l~el-l~~aDvVil~lPlt~~T~ 111 (274)
+.+|.|+|+|.+|+.+|+.|+..|..+++.+.+..... ....|.... + |.++ +.++|+|+++++....+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 45799999999999999999999998888887655443 445565321 2 2333 678999999999755444
Q ss_pred HhccHHHHhcCCCCcEEEEcC
Q psy3240 112 HLINRARLESMKPGAILINTS 132 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~ 132 (274)
.++ .....+.|...+|--+
T Consensus 84 ~i~--~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 84 QLT--EMVKEHFPHLQIIARA 102 (413)
T ss_dssp HHH--HHHHHHCTTCEEEEEE
T ss_pred HHH--HHHHHhCCCCeEEEEE
Confidence 333 4555566665554433
No 233
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.33 E-value=0.00095 Score=61.37 Aligned_cols=105 Identities=14% Similarity=0.180 Sum_probs=65.8
Q ss_pred CEEEEEccChHHHH-HHHHHccC-CCeEEEEeCCCCChhHhhc-CCcc-cCHHHHhcc--cCEEEEcCCCCcccHHhccH
Q psy3240 43 STVGIVGCGRIGLS-VLEKLIPY-KVSKFLYTSRSKKPEADKR-GAEH-TNIDDLCKQ--SDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 43 ktVGIIGlG~IG~~-iA~~L~~~-G~~vv~~~~r~~~~~a~~~-g~~~-~sl~ell~~--aDvVil~lPlt~~T~~li~~ 116 (274)
.+|||||+|.||+. .++.++.. +++++.+.++......... +... .+++++++. .|+|++++|........ .
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~--~ 85 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLA--Q 85 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHHH--H
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHH--H
Confidence 58999999999997 78877765 6766656655443222222 3333 489999976 89999999975443322 2
Q ss_pred HHHhcCCCCc-EEEEcC-CCchhcHHHHHhhhhhhhhe
Q psy3240 117 ARLESMKPGA-ILINTS-RGQLVDQEALIDFIADIRVI 152 (274)
Q Consensus 117 ~~l~~mk~ga-ilINv~-RG~iVde~aL~~~L~~~~i~ 152 (274)
..+ +.|. +++.-- .-.+-+.++|++..++.|+.
T Consensus 86 ~al---~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~ 120 (352)
T 3kux_A 86 SAL---AAGKHVVVDKPFTVTLSQANALKEHADDAGLL 120 (352)
T ss_dssp HHH---HTTCEEEECSSCCSCHHHHHHHHHHHHHTTCC
T ss_pred HHH---HCCCcEEEECCCcCCHHHHHHHHHHHHHcCCe
Confidence 233 3343 454432 23444666777766666653
No 234
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.33 E-value=0.00066 Score=62.84 Aligned_cols=106 Identities=16% Similarity=0.213 Sum_probs=65.8
Q ss_pred CCEEEEEccChHHHH-HHHHHccC-CCeEEEEeCCCCChh---HhhcC-Cc-ccCHHHHhccc--CEEEEcCCCCcccHH
Q psy3240 42 NSTVGIVGCGRIGLS-VLEKLIPY-KVSKFLYTSRSKKPE---ADKRG-AE-HTNIDDLCKQS--DFIIITSALTPDTHH 112 (274)
Q Consensus 42 gktVGIIGlG~IG~~-iA~~L~~~-G~~vv~~~~r~~~~~---a~~~g-~~-~~sl~ell~~a--DvVil~lPlt~~T~~ 112 (274)
..+|||||+|.||+. .++.++.. +++++.+.++..... +...+ .. +.++++++++. |+|++++|......
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~- 83 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFE- 83 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHHH-
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHHH-
Confidence 468999999999995 88888775 676665555544322 23332 33 34899999854 99999999533222
Q ss_pred hccHHHHhcCCCCc-EEEEcC-CCchhcHHHHHhhhhhhhhe
Q psy3240 113 LINRARLESMKPGA-ILINTS-RGQLVDQEALIDFIADIRVI 152 (274)
Q Consensus 113 li~~~~l~~mk~ga-ilINv~-RG~iVde~aL~~~L~~~~i~ 152 (274)
+-...+ +.|. +++.-- .-.+-+.++|++..++.|+.
T Consensus 84 -~~~~al---~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~ 121 (359)
T 3m2t_A 84 -MGLLAM---SKGVNVFVEKPPCATLEELETLIDAARRSDVV 121 (359)
T ss_dssp -HHHHHH---HTTCEEEECSCSCSSHHHHHHHHHHHHHHTCC
T ss_pred -HHHHHH---HCCCeEEEECCCcCCHHHHHHHHHHHHHcCCE
Confidence 122333 3343 444421 23444666777777776663
No 235
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.32 E-value=0.0011 Score=61.22 Aligned_cols=106 Identities=16% Similarity=0.186 Sum_probs=67.5
Q ss_pred CEEEEEccChHHHH-HHHHHccC-CCeEEEEeCCCCChhHhhc-CCcc-cCHHHHhc--ccCEEEEcCCCCcccHHhccH
Q psy3240 43 STVGIVGCGRIGLS-VLEKLIPY-KVSKFLYTSRSKKPEADKR-GAEH-TNIDDLCK--QSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 43 ktVGIIGlG~IG~~-iA~~L~~~-G~~vv~~~~r~~~~~a~~~-g~~~-~sl~ell~--~aDvVil~lPlt~~T~~li~~ 116 (274)
.+|||||+|.||+. .++.++.. +++++.+.++.....+... +... .+++++++ +.|+|++++|........ .
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~--~ 83 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHT--M 83 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHH--H
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHH--H
Confidence 58999999999997 67878765 6766666665543323333 4433 48999998 689999999975443322 2
Q ss_pred HHHhcCCCCc-EEEEcC-CCchhcHHHHHhhhhhhhhee
Q psy3240 117 ARLESMKPGA-ILINTS-RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 117 ~~l~~mk~ga-ilINv~-RG~iVde~aL~~~L~~~~i~~ 153 (274)
..+ +.|. +++.-- .-.+-+.++|++..++.|+.+
T Consensus 84 ~al---~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~ 119 (358)
T 3gdo_A 84 ACI---QAGKHVVMEKPMTATAEEGETLKRAADEKGVLL 119 (358)
T ss_dssp HHH---HTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHH---HcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeE
Confidence 333 3343 444421 233456667777777766643
No 236
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.30 E-value=0.00042 Score=64.18 Aligned_cols=89 Identities=20% Similarity=0.194 Sum_probs=65.7
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hh-hcCCccc----C---HHHHhcccCEEEEcCCCCcccH
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-AD-KRGAEHT----N---IDDLCKQSDFIIITSALTPDTH 111 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~-~~g~~~~----s---l~ell~~aDvVil~lPlt~~T~ 111 (274)
.|++|.|+|.|.||..+++.++.+|+++++.+.+..+.. +. +.|+..+ + +.++...+|+|+.++......
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~~- 265 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPL- 265 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCCS-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHHH-
Confidence 789999999999999999999999997777765554443 34 6676432 2 223345689999998754333
Q ss_pred HhccHHHHhcCCCCcEEEEcCCC
Q psy3240 112 HLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~RG 134 (274)
...++.|+++..+|+++..
T Consensus 266 ----~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 266 ----LPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp ----HHHHHHEEEEEEEEECCCC
T ss_pred ----HHHHHHHhcCCEEEEEccC
Confidence 3556778999999999863
No 237
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.27 E-value=0.0015 Score=60.00 Aligned_cols=106 Identities=13% Similarity=0.234 Sum_probs=66.3
Q ss_pred CEEEEEccChHHH-HHHHHHccC-CCeEEEEeCCCCChh-Hhh---cCCcc-cCHHHHhcc--cCEEEEcCCCCcccHHh
Q psy3240 43 STVGIVGCGRIGL-SVLEKLIPY-KVSKFLYTSRSKKPE-ADK---RGAEH-TNIDDLCKQ--SDFIIITSALTPDTHHL 113 (274)
Q Consensus 43 ktVGIIGlG~IG~-~iA~~L~~~-G~~vv~~~~r~~~~~-a~~---~g~~~-~sl~ell~~--aDvVil~lPlt~~T~~l 113 (274)
.+|||||+|.||+ ..+..++.. +++++.+.++..... +.. .++.. .+++++++. .|+|++++|........
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 82 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHYDLA 82 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHHHHH
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHHHHH
Confidence 4899999999999 577777665 676665655553333 333 34443 489999986 89999999964332222
Q ss_pred ccHHHHhcCCCC-cEEEEcC-CCchhcHHHHHhhhhhhhhee
Q psy3240 114 INRARLESMKPG-AILINTS-RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 114 i~~~~l~~mk~g-ailINv~-RG~iVde~aL~~~L~~~~i~~ 153 (274)
...+ +.| .+++.-- .-.+-+.++|++..++.|+.+
T Consensus 83 --~~al---~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 119 (349)
T 3i23_A 83 --KQAI---LAGKSVIVEKPFCDTLEHAEELFALGQEKGVVV 119 (349)
T ss_dssp --HHHH---HTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCE
T ss_pred --HHHH---HcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeE
Confidence 2333 334 3444422 233456667777777766644
No 238
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.25 E-value=0.00038 Score=66.18 Aligned_cols=90 Identities=12% Similarity=0.148 Sum_probs=62.1
Q ss_pred EEEEEccChHHHHHHHHHccCC--------CeEEEEeCCCCC--h-hHh---h--c------CC------cc-cCHHHHh
Q psy3240 44 TVGIVGCGRIGLSVLEKLIPYK--------VSKFLYTSRSKK--P-EAD---K--R------GA------EH-TNIDDLC 94 (274)
Q Consensus 44 tVGIIGlG~IG~~iA~~L~~~G--------~~vv~~~~r~~~--~-~a~---~--~------g~------~~-~sl~ell 94 (274)
||+|||.|..|.++|..|...| .++..|.++... . ... . . ++ .. .++++++
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 8999999999999999997544 235555443221 0 000 0 0 11 12 2789999
Q ss_pred cccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCc
Q psy3240 95 KQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 95 ~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~ 135 (274)
+.||+|++++|. ...+.++ ++..+.++++..+|+++-|=
T Consensus 116 ~~ad~ii~avPs-~~~r~~l-~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 116 KDVDIIVFNIPH-QFLPRIC-SQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp TTCSEEEECSCG-GGHHHHH-HHHTTTSCTTCEEEECCCSC
T ss_pred hcCCEEEEECCh-hhhHHHH-HHhccccCCCceeEEecccc
Confidence 999999999994 5555555 34556778999999998774
No 239
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.25 E-value=0.00065 Score=63.04 Aligned_cols=105 Identities=17% Similarity=0.132 Sum_probs=63.6
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCC-----cc---cCHHHHhcccCEEEEcCCCCcccHH
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGA-----EH---TNIDDLCKQSDFIIITSALTPDTHH 112 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~-----~~---~sl~ell~~aDvVil~lPlt~~T~~ 112 (274)
+.++|+|+|.|.+|+.+|+.|+.. .++.+++....+.+.....+ .. .++.++++++|+|+.++|..- ...
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~-~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~-~~~ 92 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL-GFK 92 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGG-HHH
T ss_pred CccEEEEECCCHHHHHHHHHHhcC-CCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcc-cch
Confidence 345799999999999999999764 45666665433322111111 11 246778999999999999642 111
Q ss_pred hccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhhe
Q psy3240 113 LINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVI 152 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~ 152 (274)
+-+.. ++.|.-++|++ ...-...+|.+..++.|+.
T Consensus 93 -v~~~~---~~~g~~yvD~s-~~~~~~~~l~~~a~~~g~~ 127 (365)
T 3abi_A 93 -SIKAA---IKSKVDMVDVS-FMPENPLELRDEAEKAQVT 127 (365)
T ss_dssp -HHHHH---HHHTCEEEECC-CCSSCGGGGHHHHHHTTCE
T ss_pred -HHHHH---HhcCcceEeee-ccchhhhhhhhhhccCCce
Confidence 22222 35677888876 3333444555555555553
No 240
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.21 E-value=0.00043 Score=63.05 Aligned_cols=109 Identities=16% Similarity=0.217 Sum_probs=62.6
Q ss_pred CEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hhh--cC------Cccc-CHHHHhcccCEEEEcCCCCcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--ADK--RG------AEHT-NIDDLCKQSDFIIITSALTPD 109 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~~--~g------~~~~-sl~ell~~aDvVil~lPlt~~ 109 (274)
++|+|||.|.||..+|..|...|. +++.+|....+.. ... .. .... +..+.++.||+|+++++....
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~~~ 80 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGANQK 80 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC-----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCCCC
Confidence 489999999999999999988887 7777776543222 111 11 1111 223578899999999954321
Q ss_pred -----------cHHhccH--HHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhh
Q psy3240 110 -----------THHLINR--ARLESMKPGAILINTSRGQLVDQEALIDFIADIRV 151 (274)
Q Consensus 110 -----------T~~li~~--~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i 151 (274)
+..++.. +.+....|++++|+++-..-+....+.+.....++
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rv 135 (304)
T 2v6b_A 81 PGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPV 135 (304)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCE
T ss_pred CCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcE
Confidence 1112110 22333368999999754433333444444433344
No 241
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.21 E-value=0.0008 Score=62.08 Aligned_cols=62 Identities=21% Similarity=0.340 Sum_probs=45.0
Q ss_pred CEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChhH--hh-------c--C--Ccc-cCHHHHhcccCEEEEcCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPEA--DK-------R--G--AEH-TNIDDLCKQSDFIIITSA 105 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~a--~~-------~--g--~~~-~sl~ell~~aDvVil~lP 105 (274)
++|+|||.|.||..+|..+...|. +++.+|......+. .. . . +.. .++ +.++.||+|+++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 699999999999999999988887 77777765432221 00 0 1 122 356 78899999999983
No 242
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.21 E-value=0.00076 Score=61.75 Aligned_cols=90 Identities=19% Similarity=0.237 Sum_probs=68.2
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc--CHHHHhcccCEEEEcCCCCcccHHhccHH
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT--NIDDLCKQSDFIIITSALTPDTHHLINRA 117 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~--sl~ell~~aDvVil~lPlt~~T~~li~~~ 117 (274)
.|.+|.|+|.|.+|...++.++.+|+++++.+.+..+.+ +++.|+..+ +.+++.+..|+|+-++..... -..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~-----~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYD-----LKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCC-----HHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHH-----HHH
Confidence 589999999999999999999999997766666555555 677787543 334444478999998875422 235
Q ss_pred HHhcCCCCcEEEEcCCCc
Q psy3240 118 RLESMKPGAILINTSRGQ 135 (274)
Q Consensus 118 ~l~~mk~gailINv~RG~ 135 (274)
.++.++++..++.++...
T Consensus 251 ~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 251 YLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp HHTTEEEEEEEEECCCCC
T ss_pred HHHHHhcCCEEEEECCCC
Confidence 677899999999997543
No 243
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=97.20 E-value=0.0016 Score=62.80 Aligned_cols=110 Identities=15% Similarity=0.242 Sum_probs=74.9
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCC--------Chh-----HhhcC-------CcccCHHHHhc-
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSK--------KPE-----ADKRG-------AEHTNIDDLCK- 95 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~--------~~~-----a~~~g-------~~~~sl~ell~- 95 (274)
|.+++|++|.|.|+|++|+.+|+.|...|++++...++.. ... ....+ .+..+.++++.
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~ 309 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGL 309 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTC
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcC
Confidence 5689999999999999999999999999998875655431 111 11111 23345667664
Q ss_pred ccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheee
Q psy3240 96 QSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 96 ~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
.||+++-|... +.++.+....++ -.+++-.+-+.+- .+ ..+.|.++|+.++
T Consensus 310 ~~DIlvPcA~~-----n~i~~~na~~l~-ak~VvEgAN~p~t-~e-A~~iL~~~GI~~~ 360 (440)
T 3aog_A 310 PVEFLVPAALE-----KQITEQNAWRIR-ARIVAEGANGPTT-PA-ADDILLEKGVLVV 360 (440)
T ss_dssp CCSEEEECSSS-----SCBCTTTGGGCC-CSEEECCSSSCBC-HH-HHHHHHHHTCEEE
T ss_pred CCcEEEecCCc-----CccchhhHHHcC-CcEEEecCccccC-HH-HHHHHHHCCCEEE
Confidence 69999998763 345566666663 5677777777754 33 3456778887655
No 244
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.20 E-value=0.0012 Score=56.38 Aligned_cols=70 Identities=16% Similarity=0.217 Sum_probs=50.3
Q ss_pred CCCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCC-cc------cCHHHHhcccCEEEEcCCCC
Q psy3240 38 PALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGA-EH------TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 38 ~~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~-~~------~sl~ell~~aDvVil~lPlt 107 (274)
..+.||+|.|.|. |.||+.+++.|...|.++++.+++..+.. ....++ .. .++.+.+..+|+|+.+....
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 5799999999997 99999999999999998877776654433 223344 32 24567888999999988754
No 245
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=97.18 E-value=0.00076 Score=62.79 Aligned_cols=69 Identities=22% Similarity=0.262 Sum_probs=49.7
Q ss_pred CCCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhc----CCcccC---HHHHhcccCEEEEc
Q psy3240 35 MCGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKR----GAEHTN---IDDLCKQSDFIIIT 103 (274)
Q Consensus 35 ~~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~----g~~~~s---l~ell~~aDvVil~ 103 (274)
|...-+.||+|+|||.|.+|+.+++.++.+|++++++++....+..... -..+.+ +.++++++|+|+..
T Consensus 7 m~~~~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 7 MTRIILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp CCCCCCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred ccccCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeec
Confidence 4456689999999999999999999999999988888765433221100 011223 66788899998653
No 246
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.18 E-value=0.0016 Score=58.55 Aligned_cols=89 Identities=16% Similarity=0.145 Sum_probs=65.4
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcc-cCHHHHhcccCEEEEcCCCCcccHHhccHHH
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEH-TNIDDLCKQSDFIIITSALTPDTHHLINRAR 118 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~-~sl~ell~~aDvVil~lPlt~~T~~li~~~~ 118 (274)
-+.++|+++|+|+||+.+++. . +++.+.++. .+.. +.|+.. .+++++++++|+|+=|.+. + -+.+..
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~--~k~g--elgv~a~~d~d~lla~pD~VVe~A~~-~----av~e~~ 77 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD--RISK--DIPGVVRLDEFQVPSDVSTVVECASP-E----AVKEYS 77 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC--SSCC--CCSSSEECSSCCCCTTCCEEEECSCH-H----HHHHHH
T ss_pred cccceEEEECcCHHHHHHHhc--C-CcEEEEEEe--cccc--ccCceeeCCHHHHhhCCCEEEECCCH-H----HHHHHH
Confidence 456899999999999999998 4 777666655 2221 225544 3799998899999998743 1 233335
Q ss_pred HhcCCCCcEEEEcCCCchhcHH
Q psy3240 119 LESMKPGAILINTSRGQLVDQE 140 (274)
Q Consensus 119 l~~mk~gailINv~RG~iVde~ 140 (274)
.+.|+.|.-+|-+|-|.+.|.+
T Consensus 78 ~~iL~aG~dvv~~S~gaLad~~ 99 (253)
T 1j5p_A 78 LQILKNPVNYIIISTSAFADEV 99 (253)
T ss_dssp HHHTTSSSEEEECCGGGGGSHH
T ss_pred HHHHHCCCCEEEcChhhhcCHH
Confidence 5668899999999999888864
No 247
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.17 E-value=0.0011 Score=61.83 Aligned_cols=106 Identities=12% Similarity=0.122 Sum_probs=67.8
Q ss_pred CEEEEEccC-hHHHHHHHHHccC-CCeEEEEeCCCCChh---HhhcCCcc-cCHHHHhcc--cCEEEEcCCCCcccHHhc
Q psy3240 43 STVGIVGCG-RIGLSVLEKLIPY-KVSKFLYTSRSKKPE---ADKRGAEH-TNIDDLCKQ--SDFIIITSALTPDTHHLI 114 (274)
Q Consensus 43 ktVGIIGlG-~IG~~iA~~L~~~-G~~vv~~~~r~~~~~---a~~~g~~~-~sl~ell~~--aDvVil~lPlt~~T~~li 114 (274)
.+|||||+| .||+..++.++.. +++++.+.++..... +.+.|+.. .+++|++++ .|+|++++|...... +
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~--~ 80 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCE--H 80 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHH--H
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHH--H
Confidence 489999999 9999999998765 566665555544322 44557754 489999975 999999999643322 2
Q ss_pred cHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhhee
Q psy3240 115 NRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 115 ~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~ 153 (274)
-...++ .|. +++.- -.-.+-+.++|++..++.|+.+
T Consensus 81 ~~~al~---aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 118 (387)
T 3moi_A 81 VVQASE---QGLHIIVEKPLTLSRDEADRMIEAVERAGVHL 118 (387)
T ss_dssp HHHHHH---TTCEEEECSCCCSCHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHH---CCCceeeeCCccCCHHHHHHHHHHHHHhCCeE
Confidence 223333 333 34332 1234456667777777766643
No 248
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.15 E-value=0.001 Score=61.32 Aligned_cols=61 Identities=20% Similarity=0.305 Sum_probs=44.2
Q ss_pred CEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh--Hh--h-----c--CC--cc-cCHHHHhcccCEEEEcC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE--AD--K-----R--GA--EH-TNIDDLCKQSDFIIITS 104 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~--a~--~-----~--g~--~~-~sl~ell~~aDvVil~l 104 (274)
++|+|||.|.||..+|..|...|. +++.+|....+.+ .. . . .. .. .++ +.++.||+|++++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 689999999999999999988787 7666765543222 10 1 1 11 12 366 7889999999998
No 249
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=97.14 E-value=0.00076 Score=64.72 Aligned_cols=111 Identities=12% Similarity=0.215 Sum_probs=68.6
Q ss_pred CCCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCC-------------C-hh---H-hhcC-------CcccCH
Q psy3240 36 CGPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSK-------------K-PE---A-DKRG-------AEHTNI 90 (274)
Q Consensus 36 ~g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~-------------~-~~---a-~~~g-------~~~~sl 90 (274)
.|.+|+|++|.|.|+|++|+.+|+.|...|++++...+... . .. . ...+ .+..+.
T Consensus 206 ~g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~ 285 (421)
T 2yfq_A 206 FGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITD 285 (421)
T ss_dssp TTCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC------------
T ss_pred cCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCc
Confidence 35689999999999999999999999999998875555441 0 11 1 1111 122233
Q ss_pred HHHhc-ccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheee
Q psy3240 91 DDLCK-QSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 91 ~ell~-~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
++++. .||+++-|.+. +.|+.+....+ ...+++-.+-+.+. .+ ..+.|.++|+.++
T Consensus 286 ~~~~~~~~DIliP~A~~-----n~i~~~~A~~l-~ak~VvEgAN~P~t-~e-a~~il~~~GI~~~ 342 (421)
T 2yfq_A 286 EEFWTKEYDIIVPAALE-----NVITGERAKTI-NAKLVCEAANGPTT-PE-GDKVLTERGINLT 342 (421)
T ss_dssp ---------CEEECSCS-----SCSCHHHHTTC-CCSEEECCSSSCSC-HH-HHHHHHHHTCEEE
T ss_pred cchhcCCccEEEEcCCc-----CcCCcccHHHc-CCeEEEeCCccccC-HH-HHHHHHHCCCEEE
Confidence 44443 69999988653 44777777777 46777777777764 33 3455777787655
No 250
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=97.14 E-value=0.0038 Score=59.76 Aligned_cols=111 Identities=14% Similarity=0.232 Sum_probs=75.8
Q ss_pred CCCCCCCCEEEEEccChHHHHHHHHHcc-CCCeEEEEeCCCC--------Chh----H-hhcC-------CcccCHHHHh
Q psy3240 36 CGPALQNSTVGIVGCGRIGLSVLEKLIP-YKVSKFLYTSRSK--------KPE----A-DKRG-------AEHTNIDDLC 94 (274)
Q Consensus 36 ~g~~L~gktVGIIGlG~IG~~iA~~L~~-~G~~vv~~~~r~~--------~~~----a-~~~g-------~~~~sl~ell 94 (274)
.|.+++|++|.|.|+|++|+.+|+.|.. .|++++...+... ... . ...+ .+..+.++++
T Consensus 203 ~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil 282 (415)
T 2tmg_A 203 LGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELL 282 (415)
T ss_dssp TTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHT
T ss_pred cCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhh
Confidence 4678999999999999999999999998 9998875655431 111 1 1111 2333566766
Q ss_pred c-ccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheee
Q psy3240 95 K-QSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 95 ~-~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
. .||+++-|... +.++.+..+.++ -.+++-.+-+.+- .+ -.+.|.++|+.++
T Consensus 283 ~~~~DIliP~A~~-----n~i~~~~a~~l~-ak~V~EgAN~p~t-~~-a~~~l~~~Gi~~~ 335 (415)
T 2tmg_A 283 ELDVDILVPAALE-----GAIHAGNAERIK-AKAVVEGANGPTT-PE-ADEILSRRGILVV 335 (415)
T ss_dssp TCSCSEEEECSST-----TSBCHHHHTTCC-CSEEECCSSSCBC-HH-HHHHHHHTTCEEE
T ss_pred cCCCcEEEecCCc-----CccCcccHHHcC-CeEEEeCCCcccC-HH-HHHHHHHCCCEEE
Confidence 4 79999998764 346777777774 5577777777653 33 3355777777654
No 251
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.13 E-value=0.0014 Score=59.53 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=70.6
Q ss_pred CCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcc-cCHHHHhc--ccCEEEEcCCCCcccHHhccHH
Q psy3240 42 NSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEH-TNIDDLCK--QSDFIIITSALTPDTHHLINRA 117 (274)
Q Consensus 42 gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~-~sl~ell~--~aDvVil~lPlt~~T~~li~~~ 117 (274)
.++|+|+|+ |++|+.+++.++..|++.+...++.. ......|... .+++|+.+ ..|++++++|. +.+..++.+
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~-~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~-~~~~~~~~e- 83 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGK-GGMEVLGVPVYDTVKEAVAHHEVDASIIFVPA-PAAADAALE- 83 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTC-TTCEETTEEEESSHHHHHHHSCCSEEEECCCH-HHHHHHHHH-
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCC-CCceECCEEeeCCHHHHhhcCCCCEEEEecCH-HHHHHHHHH-
Confidence 478999998 99999999999988996442333322 1111245544 38999988 89999999995 344444432
Q ss_pred HHhcCCCCcEEEEcCCCc-hhcHHHHHhhhhhhhheeeh
Q psy3240 118 RLESMKPGAILINTSRGQ-LVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 118 ~l~~mk~gailINv~RG~-iVde~aL~~~L~~~~i~~~D 155 (274)
..+. +-. .+|..+.|= ..+++.+.+..++.++.++.
T Consensus 84 a~~~-Gi~-~vVi~t~G~~~~~~~~l~~~a~~~gi~vig 120 (288)
T 1oi7_A 84 AAHA-GIP-LIVLITEGIPTLDMVRAVEEIKALGSRLIG 120 (288)
T ss_dssp HHHT-TCS-EEEECCSCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHC-CCC-EEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 2222 222 244455553 23567888888888886663
No 252
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.12 E-value=0.00095 Score=60.88 Aligned_cols=63 Identities=21% Similarity=0.348 Sum_probs=45.1
Q ss_pred CEEEEEccChHHHHHHHHHcc--CCCeEEEEeCCCCChhHh----hc-------C--Ccc-cCHHHHhcccCEEEEcCCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIP--YKVSKFLYTSRSKKPEAD----KR-------G--AEH-TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~--~G~~vv~~~~r~~~~~a~----~~-------g--~~~-~sl~ell~~aDvVil~lPl 106 (274)
++|+|||.|.||..+|..|.. +|.++++++....+.+.. .. . +.. .++++ ++.||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 489999999999999999976 577777777654433211 11 1 112 35666 8999999999984
No 253
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.10 E-value=0.0011 Score=60.86 Aligned_cols=70 Identities=16% Similarity=0.206 Sum_probs=48.2
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccC--------CCeEEEEeCCCCC-hh--HhhcCCc--ccCHHHHhc--ccCEEEEc
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPY--------KVSKFLYTSRSKK-PE--ADKRGAE--HTNIDDLCK--QSDFIIIT 103 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~--------G~~vv~~~~r~~~-~~--a~~~g~~--~~sl~ell~--~aDvVil~ 103 (274)
..+--+|||||+|.||+.-++.++.. +++++.+.++... .+ +.+.++. +.+++|+++ +.|+|+++
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Ia 101 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVT 101 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEEC
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEEC
Confidence 34456899999999999877776542 5666666555443 33 5566774 348999996 47999999
Q ss_pred CCCCc
Q psy3240 104 SALTP 108 (274)
Q Consensus 104 lPlt~ 108 (274)
+|..-
T Consensus 102 tP~~~ 106 (393)
T 4fb5_A 102 TPNQF 106 (393)
T ss_dssp SCGGG
T ss_pred CChHH
Confidence 99643
No 254
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.07 E-value=0.00066 Score=62.03 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=62.6
Q ss_pred CEEEEEccChHHHH-HHHHHccC-CCeEEEEeCCCCChh---HhhcCCc--ccCHHHHhc--ccCEEEEcCCCCcccHHh
Q psy3240 43 STVGIVGCGRIGLS-VLEKLIPY-KVSKFLYTSRSKKPE---ADKRGAE--HTNIDDLCK--QSDFIIITSALTPDTHHL 113 (274)
Q Consensus 43 ktVGIIGlG~IG~~-iA~~L~~~-G~~vv~~~~r~~~~~---a~~~g~~--~~sl~ell~--~aDvVil~lPlt~~T~~l 113 (274)
.+|||||+|.||+. .+..++.. +++++.+.++..... +.+.|+. +.+++|+++ +.|+|++++|..-...
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H~~-- 101 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQHIE-- 101 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGHHH--
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchhHH--
Confidence 48999999999986 56677654 676666666554322 4566774 359999985 4799999999633222
Q ss_pred ccHHHHhcCCCCcEEEEcC-CCchhcHHHHHhhhhhhhh
Q psy3240 114 INRARLESMKPGAILINTS-RGQLVDQEALIDFIADIRV 151 (274)
Q Consensus 114 i~~~~l~~mk~gailINv~-RG~iVde~aL~~~L~~~~i 151 (274)
+-...++.=| .+++-=- --.+-+.++|++..++.|+
T Consensus 102 ~~~~al~aGk--hVl~EKPla~~~~ea~~l~~~a~~~~~ 138 (350)
T 4had_A 102 WSIKAADAGK--HVVCEKPLALKAGDIDAVIAARDRNKV 138 (350)
T ss_dssp HHHHHHHTTC--EEEECSCCCSSGGGGHHHHHHHHHHTC
T ss_pred HHHHHHhcCC--EEEEeCCcccchhhHHHHHHHHHHcCC
Confidence 2233333221 2333311 1223455566665555554
No 255
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.07 E-value=0.00049 Score=63.10 Aligned_cols=97 Identities=16% Similarity=0.261 Sum_probs=58.3
Q ss_pred CCEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChhHhhc----C-------Ccc-cCHHHHhcccCEEEEcCCCC
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPEADKR----G-------AEH-TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~a~~~----g-------~~~-~sl~ell~~aDvVil~lPlt 107 (274)
-++|+|||.|.||.++|..++..|. +++.+|....+...... . ... .+..+.++.||+|+++.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 4699999999999999999976553 56677655332211110 0 111 13456789999999998754
Q ss_pred ccc-----------HHhcc--HHHHhcCCCCcEEEEcCCCchhcHH
Q psy3240 108 PDT-----------HHLIN--RARLESMKPGAILINTSRGQLVDQE 140 (274)
Q Consensus 108 ~~T-----------~~li~--~~~l~~mk~gailINv~RG~iVde~ 140 (274)
..- ..++. .+.+....|++++++++- ++|.-
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN--Pv~~~ 129 (316)
T 1ldn_A 86 QKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN--PVDIL 129 (316)
T ss_dssp CCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS--SHHHH
T ss_pred CCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC--chHHH
Confidence 311 01111 012333358889999753 55443
No 256
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.07 E-value=0.00046 Score=60.43 Aligned_cols=65 Identities=14% Similarity=0.197 Sum_probs=41.7
Q ss_pred CCEEEEEccChHHHHHHHH--HccCCCeEEEEeCCCCChh-HhhcCCc---ccCHHHHhcccCEEEEcCCC
Q psy3240 42 NSTVGIVGCGRIGLSVLEK--LIPYKVSKFLYTSRSKKPE-ADKRGAE---HTNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~--L~~~G~~vv~~~~r~~~~~-a~~~g~~---~~sl~ell~~aDvVil~lPl 106 (274)
.++|+|||+|++|+.+|+. ....|++++++.++.+... ....++. ..++++++++.|+|++++|.
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 3579999999999999994 3456787776655444332 2122322 23788988777999999996
No 257
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.05 E-value=0.0015 Score=58.05 Aligned_cols=81 Identities=15% Similarity=0.057 Sum_probs=52.4
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCccc-CHHHHhcccCEEEEcCCCCcccHHhccHHHHhc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHT-NIDDLCKQSDFIIITSALTPDTHHLINRARLES 121 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~-sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~ 121 (274)
.+|+|+|+|+||+.+++.+...+-+.+...++.... ..++... ++++++ ++|+|+-..+. ..+. +.+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~---~~gv~v~~dl~~l~-~~DVvIDft~p-~a~~-----~~~~- 72 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA---TTPYQQYQHIADVK-GADVAIDFSNP-NLLF-----PLLD- 72 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-----CCSCBCSCTTTCT-TCSEEEECSCH-HHHH-----HHHT-
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc---cCCCceeCCHHHHh-CCCEEEEeCCh-HHHH-----HHHH-
Confidence 689999999999999999987765555545544332 3455443 788888 99998843321 1222 2333
Q ss_pred CCCCcEEEEcCCC
Q psy3240 122 MKPGAILINTSRG 134 (274)
Q Consensus 122 mk~gailINv~RG 134 (274)
++.|.-+|-...|
T Consensus 73 l~~g~~vVigTTG 85 (243)
T 3qy9_A 73 EDFHLPLVVATTG 85 (243)
T ss_dssp SCCCCCEEECCCS
T ss_pred HhcCCceEeCCCC
Confidence 6777666655555
No 258
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=97.05 E-value=0.00045 Score=63.82 Aligned_cols=91 Identities=16% Similarity=0.152 Sum_probs=64.5
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCC---CChh-HhhcCCccc---CHHHHh----cccCEEEEcCCCC
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRS---KKPE-ADKRGAEHT---NIDDLC----KQSDFIIITSALT 107 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~---~~~~-a~~~g~~~~---sl~ell----~~aDvVil~lPlt 107 (274)
.+.|++|.|+|.|.||..+++.++.+|+++++.+.+. .+.+ +.+.|+..+ ++.+.+ ...|+|+.++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 5779999999999999999999999999777766554 3333 455666432 111222 3589999988753
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~R 133 (274)
... + ...++.|+++..+|+++.
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 322 1 456778899999999875
No 259
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.05 E-value=0.0015 Score=59.85 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=74.2
Q ss_pred CCCCCEEEEE-cc-ChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCccc-CHHHHhc--ccCEEEEcCCCCcccHHh
Q psy3240 39 ALQNSTVGIV-GC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHT-NIDDLCK--QSDFIIITSALTPDTHHL 113 (274)
Q Consensus 39 ~L~gktVGII-Gl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~-sl~ell~--~aDvVil~lPlt~~T~~l 113 (274)
-+..++++|| |+ |++|+.+++.++..|++ +++.-++.+....-.|.... +++|+.+ ..|++++++|. +....+
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~-~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~vP~-~~~~~~ 87 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTN-LVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPP-PFAAAA 87 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCc-EEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEecCH-HHHHHH
Confidence 4667889999 99 99999999999999997 44332222111112455543 8999988 89999999995 334444
Q ss_pred ccHHHHhcCCCCcEEEEcCCCch-hcHHHHHhhhhhh-hheeeh
Q psy3240 114 INRARLESMKPGAILINTSRGQL-VDQEALIDFIADI-RVISIS 155 (274)
Q Consensus 114 i~~~~l~~mk~gailINv~RG~i-Vde~aL~~~L~~~-~i~~~D 155 (274)
+.+ ..+. .- ..+|+.+.|-. -++..+.+..++. |+..+.
T Consensus 88 ~~e-~i~~-Gi-~~iv~~t~G~~~~~~~~l~~~a~~~~gi~liG 128 (305)
T 2fp4_A 88 INE-AIDA-EV-PLVVCITEGIPQQDMVRVKHRLLRQGKTRLIG 128 (305)
T ss_dssp HHH-HHHT-TC-SEEEECCCCCCHHHHHHHHHHHTTCSSCEEEC
T ss_pred HHH-HHHC-CC-CEEEEECCCCChHHHHHHHHHHHhcCCcEEEe
Confidence 433 2221 21 24566776643 3556888988888 887664
No 260
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=97.05 E-value=0.0011 Score=63.68 Aligned_cols=110 Identities=15% Similarity=0.218 Sum_probs=75.6
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCC--------hh-H---h-hcC------CcccCHHHHh-cc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKK--------PE-A---D-KRG------AEHTNIDDLC-KQ 96 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~--------~~-a---~-~~g------~~~~sl~ell-~~ 96 (274)
|.+|+|+||.|-|+|++|+.+|+.|...|++++...+.... .. . . +.+ .+..+.++++ ..
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~ 295 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKD 295 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSC
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceecc
Confidence 67899999999999999999999999999987766555421 11 1 1 112 2334566655 46
Q ss_pred cCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheee
Q psy3240 97 SDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 97 aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
||+++-|... +.|+.+..+.++ -.+++-.+-+.+- .+ ..+.|.++||.++
T Consensus 296 ~DIliPcA~~-----n~I~~~~a~~l~-ak~V~EgAN~p~t-~e-A~~iL~~rGI~~~ 345 (424)
T 3k92_A 296 CDILVPAAIS-----NQITAKNAHNIQ-ASIVVERANGPTT-ID-ATKILNERGVLLV 345 (424)
T ss_dssp CSEEEECSCS-----SCBCTTTGGGCC-CSEEECCSSSCBC-HH-HHHHHHHTTCEEE
T ss_pred ccEEeecCcc-----cccChhhHhhcC-ceEEEcCCCCCCC-HH-HHHHHHHCCCEEE
Confidence 9999887653 457777677773 5677777777753 33 3466777777544
No 261
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.04 E-value=0.0011 Score=57.10 Aligned_cols=88 Identities=14% Similarity=0.205 Sum_probs=56.9
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-----C---HHHH-hcccCEEEEcCCCCccc
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-----N---IDDL-CKQSDFIIITSALTPDT 110 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-----s---l~el-l~~aDvVil~lPlt~~T 110 (274)
..+++.|+|+|.+|+.+|+.|...|. +++.+++..... .. .++... + ++++ +.++|.|++++|....
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~- 84 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE- 84 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHH-
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHH-
Confidence 35689999999999999999999898 777765443322 22 444321 2 3333 6789999999986433
Q ss_pred HHhccHHHHhcCCCC-cEEEEcC
Q psy3240 111 HHLINRARLESMKPG-AILINTS 132 (274)
Q Consensus 111 ~~li~~~~l~~mk~g-ailINv~ 132 (274)
++.-....+.+.++ .+++.+.
T Consensus 85 -n~~~~~~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 85 -TIHCILGIRKIDESVRIIAEAE 106 (234)
T ss_dssp -HHHHHHHHHHHCSSSEEEEECS
T ss_pred -HHHHHHHHHHHCCCCeEEEEEC
Confidence 33334455666777 4555443
No 262
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.04 E-value=0.00034 Score=62.05 Aligned_cols=38 Identities=32% Similarity=0.330 Sum_probs=31.6
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCe-EEEEeCCC
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVS-KFLYTSRS 75 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~-vv~~~~r~ 75 (274)
..|++++|.|||+|.+|..+|+.|...|.. .+++|+..
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 468999999999999999999999998974 45555544
No 263
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.03 E-value=0.0028 Score=57.08 Aligned_cols=105 Identities=19% Similarity=0.221 Sum_probs=68.8
Q ss_pred CEEEEEccChHHHHHHHHHcc----CCCeEEEEeCCCCChhHhhcCCcccCHHHHhc--ccCEEEEcCCCCcccHHhccH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIP----YKVSKFLYTSRSKKPEADKRGAEHTNIDDLCK--QSDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~----~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~--~aDvVil~lPlt~~T~~li~~ 116 (274)
.+|||||+|.||+..++.+.. -+++++...++... +...++.+.+++|+++ +.|+|++++|...... +-.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~--a~~~g~~~~~~~ell~~~~vD~V~i~tp~~~H~~--~~~ 83 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL--GSLDEVRQISLEDALRSQEIDVAYICSESSSHED--YIR 83 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC--CEETTEEBCCHHHHHHCSSEEEEEECSCGGGHHH--HHH
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH--HHHcCCCCCCHHHHhcCCCCCEEEEeCCcHhHHH--HHH
Confidence 589999999999999998865 35655655554322 2234555568999986 6899999999643322 222
Q ss_pred HHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhheee
Q psy3240 117 ARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 117 ~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
..+ +.|. +++.- -.-.+-+.++|++..+++|+.+.
T Consensus 84 ~al---~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 120 (294)
T 1lc0_A 84 QFL---QAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLH 120 (294)
T ss_dssp HHH---HTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHH---HCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 344 3444 66663 22344566788887777777644
No 264
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.03 E-value=0.00086 Score=60.56 Aligned_cols=95 Identities=15% Similarity=0.343 Sum_probs=57.7
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hh--hcCC------cc--cCHHHHhcccCEEEEcCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--AD--KRGA------EH--TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~--~~g~------~~--~sl~ell~~aDvVil~lPl 106 (274)
..++|+|||.|.||..+|..|...|. ++++++.+..... +. ..+. .. .+-.+.++.||+|+++++.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~ 85 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGP 85 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCC
Confidence 34799999999999999999988887 7777765432221 11 1111 11 1123567899999999964
Q ss_pred Ccc---cH--------Hhcc--HHHHhcCCCCcEEEEcCCCc
Q psy3240 107 TPD---TH--------HLIN--RARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 107 t~~---T~--------~li~--~~~l~~mk~gailINv~RG~ 135 (274)
... ++ .++. .+.+....+++++|+++-|-
T Consensus 86 ~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 86 RQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 321 11 1110 11222236889999986543
No 265
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.03 E-value=0.00093 Score=64.27 Aligned_cols=109 Identities=12% Similarity=0.119 Sum_probs=66.6
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh--HhhcC-Cc-----cc---CHHHHhcccCEEEEcCCCCcc
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRG-AE-----HT---NIDDLCKQSDFIIITSALTPD 109 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g-~~-----~~---sl~ell~~aDvVil~lPlt~~ 109 (274)
.+++|+|+|.|.||+.+|+.|...|.++++++++..+.. +...+ +. .. ++.++++.+|+|+.++|....
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~ 81 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH 81 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccc
Confidence 478999999999999999999999987666665433222 11111 11 11 355778899999999986432
Q ss_pred cHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 110 THHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 110 T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
. -+....+ ++|..+++.+.-. -....+.+..++.|+.+++
T Consensus 82 ~--~i~~a~l---~~g~~vvd~~~~~-~~~~~l~~aA~~aGv~~i~ 121 (450)
T 1ff9_A 82 A--TVIKSAI---RQKKHVVTTSYVS-PAMMELDQAAKDAGITVMN 121 (450)
T ss_dssp H--HHHHHHH---HHTCEEEESSCCC-HHHHHTHHHHHHTTCEEEC
T ss_pred h--HHHHHHH---hCCCeEEEeeccc-HHHHHHHHHHHHCCCeEEe
Confidence 1 1222223 4456666664211 1245666666666766554
No 266
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.02 E-value=0.00066 Score=64.73 Aligned_cols=108 Identities=14% Similarity=0.151 Sum_probs=71.1
Q ss_pred CCEEEEEcc----ChHHHHHHHHHccC--CCeEEEEeCCCCChh---HhhcCCc----ccCHHHHhc--ccCEEEEcCCC
Q psy3240 42 NSTVGIVGC----GRIGLSVLEKLIPY--KVSKFLYTSRSKKPE---ADKRGAE----HTNIDDLCK--QSDFIIITSAL 106 (274)
Q Consensus 42 gktVGIIGl----G~IG~~iA~~L~~~--G~~vv~~~~r~~~~~---a~~~g~~----~~sl~ell~--~aDvVil~lPl 106 (274)
-.+|||||+ |.||+..++.++.. +++++.+.++..... +...|+. +.+++++++ +.|+|++++|.
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 99 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQV 99 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCH
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCc
Confidence 358999999 99999999999876 676666655554322 3455664 348999996 58999999995
Q ss_pred CcccHHhccHHHHhcCCCC-------cEEEEc-CCCchhcHHHHHhhhhhhhheee
Q psy3240 107 TPDTHHLINRARLESMKPG-------AILINT-SRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~g-------ailINv-~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
....... ...+ +.| .+++.- -.-.+-+.++|++..++.|+.+.
T Consensus 100 ~~H~~~~--~~al---~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 150 (438)
T 3btv_A 100 ASHYEVV--MPLL---EFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTI 150 (438)
T ss_dssp HHHHHHH--HHHH---HHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHH--HHHH---HCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 4332222 1223 333 567762 22344566778877777776544
No 267
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.01 E-value=0.0031 Score=60.27 Aligned_cols=114 Identities=11% Similarity=0.154 Sum_probs=74.1
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCC--hh---HhhcCCccc---CHHHHhcc-cCEEEEcCCCCc
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKK--PE---ADKRGAEHT---NIDDLCKQ-SDFIIITSALTP 108 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~--~~---a~~~g~~~~---sl~ell~~-aDvVil~lPlt~ 108 (274)
.++.||+|.|||+|..|.++|+.|+..|+++.++|.+... +. ..+.|+... ..++++.. +|+|++.--..+
T Consensus 5 ~~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~ 84 (451)
T 3lk7_A 5 TTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPY 84 (451)
T ss_dssp CTTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCT
T ss_pred hhcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCC
Confidence 4688999999999999999999999999988888875421 11 345677542 34456676 899988533322
Q ss_pred ccHH----------hccH-HHHhcCCCCcEE-EEcCCCchhcHHHHHhhhhhhhh
Q psy3240 109 DTHH----------LINR-ARLESMKPGAIL-INTSRGQLVDQEALIDFIADIRV 151 (274)
Q Consensus 109 ~T~~----------li~~-~~l~~mk~gail-INv~RG~iVde~aL~~~L~~~~i 151 (274)
.... ++.+ +.+..+.+..++ |--+.|+.-...-+...|+..|.
T Consensus 85 ~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 139 (451)
T 3lk7_A 85 NNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQ 139 (451)
T ss_dssp TSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred CChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCC
Confidence 2211 2222 334333334444 33445887777777777877664
No 268
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.99 E-value=0.0013 Score=63.76 Aligned_cols=104 Identities=10% Similarity=0.167 Sum_probs=69.4
Q ss_pred CCEEEEEcc----ChHHHHHHHHHccC--CCeEEEEeCCCCChh---HhhcCCc----ccCHHHHhc--ccCEEEEcCCC
Q psy3240 42 NSTVGIVGC----GRIGLSVLEKLIPY--KVSKFLYTSRSKKPE---ADKRGAE----HTNIDDLCK--QSDFIIITSAL 106 (274)
Q Consensus 42 gktVGIIGl----G~IG~~iA~~L~~~--G~~vv~~~~r~~~~~---a~~~g~~----~~sl~ell~--~aDvVil~lPl 106 (274)
-.+|||||+ |.||+..++.|+.. +++++.+.++..... +...|+. +.+++++++ +.|+|++++|.
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~ 118 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKV 118 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCH
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCc
Confidence 468999999 99999999999876 676665655554322 3455664 348999996 68999999995
Q ss_pred CcccHHhccHHHHhcCCCC-------cEEEEc-CCCchhcHHHHHhhhhhhh
Q psy3240 107 TPDTHHLINRARLESMKPG-------AILINT-SRGQLVDQEALIDFIADIR 150 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~g-------ailINv-~RG~iVde~aL~~~L~~~~ 150 (274)
....... ...+ +.| .+++.- -.-.+-+.++|++..++.|
T Consensus 119 ~~H~~~~--~~al---~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g 165 (479)
T 2nvw_A 119 PEHYEVV--KNIL---EHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRA 165 (479)
T ss_dssp HHHHHHH--HHHH---HHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCT
T ss_pred HHHHHHH--HHHH---HCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcC
Confidence 3332222 2233 334 477774 2234456677888777777
No 269
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.92 E-value=0.0025 Score=59.21 Aligned_cols=86 Identities=22% Similarity=0.242 Sum_probs=52.7
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh---HhhcCCccc------------------CHHHHhcccCEE
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE---ADKRGAEHT------------------NIDDLCKQSDFI 100 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~---a~~~g~~~~------------------sl~ell~~aDvV 100 (274)
.+|||+|+|.||+.+++.|... +++++...++..... +...++... ++++++.++|+|
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 3799999999999999999754 566666666543322 222233211 334556689999
Q ss_pred EEcCCCCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 101 IITSALTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 101 il~lPlt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+.|+|.... .... ... ++.|+.+|+.|.
T Consensus 82 ~~aTp~~~s-~~~a-~~~---~~aG~kvV~~sa 109 (340)
T 1b7g_O 82 VDTTPNGVG-AQYK-PIY---LQLQRNAIFQGG 109 (340)
T ss_dssp EECCSTTHH-HHHH-HHH---HHTTCEEEECTT
T ss_pred EECCCCchh-HHHH-HHH---HHcCCeEEEeCC
Confidence 999985322 2111 222 245666666653
No 270
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.91 E-value=0.0014 Score=60.41 Aligned_cols=96 Identities=23% Similarity=0.312 Sum_probs=60.7
Q ss_pred CEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hh--h-------cCCcc--cCHHHHhcccCEEEEcCCCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--AD--K-------RGAEH--TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~--~-------~g~~~--~sl~ell~~aDvVil~lPlt 107 (274)
++|+|||.|.||.++|..+...|. +++.+|....+.. +. . ..... .+..+.++.||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 589999999999999999876665 6777776554322 11 0 11221 25578899999999998643
Q ss_pred cc---cH-Hhc--cH-------HHHhcCCCCcEEEEcCCCchhcHH
Q psy3240 108 PD---TH-HLI--NR-------ARLESMKPGAILINTSRGQLVDQE 140 (274)
Q Consensus 108 ~~---T~-~li--~~-------~~l~~mk~gailINv~RG~iVde~ 140 (274)
.. +| .++ |. +.+....|++++++++ .++|.-
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~ 124 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA--NPLDVM 124 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC--SSHHHH
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC--CchhHH
Confidence 21 11 111 11 2344557899999998 445443
No 271
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.91 E-value=0.0016 Score=59.98 Aligned_cols=89 Identities=26% Similarity=0.314 Sum_probs=65.1
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-------CHHHHh-cccCEEEEcCCC--Ccc
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-------NIDDLC-KQSDFIIITSAL--TPD 109 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-------sl~ell-~~aDvVil~lPl--t~~ 109 (274)
.|++|.|+|.|.+|..+++.++.+|+++++.+.+..+.+ +++.|+..+ ++.+.+ ...|+|+.++.. .+.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~ 258 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID 258 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHH
Confidence 589999999999999999999999998777776555555 666776532 222223 368999999875 222
Q ss_pred cHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 110 THHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 110 T~~li~~~~l~~mk~gailINv~RG 134 (274)
. ...++.++++..++.++..
T Consensus 259 ~-----~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 259 F-----NIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp T-----TTGGGGEEEEEEEEECCCC
T ss_pred H-----HHHHHHhcCCCEEEEecCC
Confidence 2 2456678899999998754
No 272
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.89 E-value=0.0015 Score=60.67 Aligned_cols=89 Identities=22% Similarity=0.259 Sum_probs=65.2
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc----C---HHHHhcccCEEEEcCCCCcccHH
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT----N---IDDLCKQSDFIIITSALTPDTHH 112 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~----s---l~ell~~aDvVil~lPlt~~T~~ 112 (274)
.|.+|.|+|.|.+|...++.++.+|+++++.+.+..+.+ +.+.|+..+ + .+++....|+|+-++......
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~~-- 271 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNL-- 271 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCH--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHHH--
Confidence 589999999999999999999999998666665555444 566776532 2 122334689999988753222
Q ss_pred hccHHHHhcCCCCcEEEEcCCC
Q psy3240 113 LINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 113 li~~~~l~~mk~gailINv~RG 134 (274)
...++.++++..++.++..
T Consensus 272 ---~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 272 ---DDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp ---HHHHTTEEEEEEEEECCCC
T ss_pred ---HHHHHHhccCCEEEEeccC
Confidence 3567788999999998753
No 273
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.87 E-value=0.0037 Score=57.55 Aligned_cols=98 Identities=21% Similarity=0.262 Sum_probs=70.6
Q ss_pred CCCCCEEEEEccC---hHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCc-------
Q psy3240 39 ALQNSTVGIVGCG---RIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTP------- 108 (274)
Q Consensus 39 ~L~gktVGIIGlG---~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~------- 108 (274)
.+.|++|+++|=| ++..+++..+..+|+++.+..+..-.+.....| ...+++|+++.+|+|..-.--.+
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g-~~~d~~eav~~aDvvyt~~~q~er~~~~~~ 222 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFG-TYVSMDEAVESSDVVMLLRIQNERHQSAVS 222 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTCSSC-EECCHHHHHHHCSEEEECCCCTTTCCSSCC
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcchhhcC-ccCCHHHHhCCCCEEEeccchhhccccchh
Confidence 5899999999964 799999999999999766665543222211223 34589999999999998532111
Q ss_pred --c--cHHhccHHHHhcCCCCcEEEEcC---CCchh
Q psy3240 109 --D--THHLINRARLESMKPGAILINTS---RGQLV 137 (274)
Q Consensus 109 --~--T~~li~~~~l~~mk~gailINv~---RG~iV 137 (274)
+ ...-++.+.++.+|++++|.-+. ||.=|
T Consensus 223 ~~~~~~~y~v~~~~l~~a~~~ai~mHclP~~Rg~EI 258 (304)
T 3r7f_A 223 QEGYLNKYGLTVERAERMKRHAIIMHPAPVNRGVEI 258 (304)
T ss_dssp STTHHHHHSBCHHHHTTSCTTCEEECCSCCCBTTTB
T ss_pred HHHHhCCCccCHHHHhhcCCCCEEECCCCCCCCcee
Confidence 1 12347899999999999999886 55433
No 274
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.84 E-value=0.0041 Score=57.33 Aligned_cols=101 Identities=13% Similarity=0.217 Sum_probs=71.3
Q ss_pred CCCCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh----HhhcCCc--c-cCHHHHhcccCEEEEcC----CC
Q psy3240 39 ALQNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE----ADKRGAE--H-TNIDDLCKQSDFIIITS----AL 106 (274)
Q Consensus 39 ~L~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~----a~~~g~~--~-~sl~ell~~aDvVil~l----Pl 106 (274)
.+.|++|++|| .+++..+.+..+..+|+++.+..+..-.+. +.+.|.. . .+++|+++.+|+|..-+ ..
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~ 230 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGF 230 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC-----
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcc
Confidence 58999999999 578999999999999997766665432221 1122332 2 38999999999999854 00
Q ss_pred ---Cc---c--cHHhccHHHHhcCCCCcEEEEcC---CCchhcH
Q psy3240 107 ---TP---D--THHLINRARLESMKPGAILINTS---RGQLVDQ 139 (274)
Q Consensus 107 ---t~---~--T~~li~~~~l~~mk~gailINv~---RG~iVde 139 (274)
.+ + ...-++.+.++.+|++++|.-+. ||.=|+.
T Consensus 231 e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~ 274 (309)
T 4f2g_A 231 EAENEARKRAFADWCVDEEMMSHANSDALFMHCLPAHRGEEVTA 274 (309)
T ss_dssp -------CCSGGGGCBCHHHHTTSCTTCEEEECSSCCBTTTBCH
T ss_pred hhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCCCCCCCceecH
Confidence 00 0 12447999999999999999986 5654443
No 275
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.84 E-value=0.0023 Score=59.05 Aligned_cols=65 Identities=25% Similarity=0.287 Sum_probs=46.0
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh---HhhcCC------------------cc-cCHHHHhcccCE
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE---ADKRGA------------------EH-TNIDDLCKQSDF 99 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~---a~~~g~------------------~~-~sl~ell~~aDv 99 (274)
.+|||+|+|.||+.+++.+... +++++...++..... +...|+ .. .++++++..+|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 4899999999999999999764 455555554443322 223332 11 378888889999
Q ss_pred EEEcCCCC
Q psy3240 100 IIITSALT 107 (274)
Q Consensus 100 Vil~lPlt 107 (274)
|+.|+|..
T Consensus 83 V~~aTp~~ 90 (334)
T 2czc_A 83 IVDATPGG 90 (334)
T ss_dssp EEECCSTT
T ss_pred EEECCCcc
Confidence 99999964
No 276
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.83 E-value=0.0039 Score=57.73 Aligned_cols=106 Identities=8% Similarity=0.114 Sum_probs=65.0
Q ss_pred CCCEEEEEccChHHH-HHHHHHccCCCeEEEEeCCCCChh---HhhcCC-c-ccCHHHHhcc--cCEEEEcCCCCcccHH
Q psy3240 41 QNSTVGIVGCGRIGL-SVLEKLIPYKVSKFLYTSRSKKPE---ADKRGA-E-HTNIDDLCKQ--SDFIIITSALTPDTHH 112 (274)
Q Consensus 41 ~gktVGIIGlG~IG~-~iA~~L~~~G~~vv~~~~r~~~~~---a~~~g~-~-~~sl~ell~~--aDvVil~lPlt~~T~~ 112 (274)
+-.+|||||+|.+|. .++..++.-+++++.+.++..... +.+.+. . +.+++++++. .|+|++++|......
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~- 103 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSERAE- 103 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHHHH-
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHH-
Confidence 346899999999995 567777777887776666654332 445553 3 3599999975 899999999533222
Q ss_pred hccHHHHhcCCCC-cEEEEc-CCCchhcHHHHHhhhhhhhh
Q psy3240 113 LINRARLESMKPG-AILINT-SRGQLVDQEALIDFIADIRV 151 (274)
Q Consensus 113 li~~~~l~~mk~g-ailINv-~RG~iVde~aL~~~L~~~~i 151 (274)
+-...++ .| .+++.- -.-.+-+.++|++..++.|+
T Consensus 104 -~~~~al~---aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 140 (361)
T 3u3x_A 104 -LAIRAMQ---HGKDVLVDKPGMTSFDQLAKLRRVQAETGR 140 (361)
T ss_dssp -HHHHHHH---TTCEEEEESCSCSSHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHH---CCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 1223333 33 244432 12233455666666666555
No 277
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.81 E-value=0.0078 Score=56.21 Aligned_cols=102 Identities=20% Similarity=0.215 Sum_probs=73.1
Q ss_pred CCCCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh------H----hhcCCcc---cCHHHHhcccCEEEEcC
Q psy3240 39 ALQNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE------A----DKRGAEH---TNIDDLCKQSDFIIITS 104 (274)
Q Consensus 39 ~L~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~------a----~~~g~~~---~sl~ell~~aDvVil~l 104 (274)
.+.|++|++|| .+++..+++..+..+|+++.+..+..-.+. + .+.|... .+++|+++.+|||..-.
T Consensus 176 ~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~ 255 (340)
T 4ep1_A 176 TFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDV 255 (340)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecC
Confidence 48999999999 478999999999999998777766543321 1 1345432 38999999999998855
Q ss_pred CCCc------c-----cHHhccHHHHhcCCCCcEEEEcC---CCchhcHH
Q psy3240 105 ALTP------D-----THHLINRARLESMKPGAILINTS---RGQLVDQE 140 (274)
Q Consensus 105 Plt~------~-----T~~li~~~~l~~mk~gailINv~---RG~iVde~ 140 (274)
=... + ...-++.+.++.+||+++|.-+. ||.=|+.+
T Consensus 256 w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~e 305 (340)
T 4ep1_A 256 WMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGE 305 (340)
T ss_dssp C------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred ccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 3211 0 01246889999999999999987 67544443
No 278
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.79 E-value=0.001 Score=62.41 Aligned_cols=106 Identities=17% Similarity=0.190 Sum_probs=64.3
Q ss_pred CEEEEEccChHHHHHHHHHccC---------CCeEEEEeCCCCChh---HhhcCCc--ccCHHHHhc--ccCEEEEcCCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY---------KVSKFLYTSRSKKPE---ADKRGAE--HTNIDDLCK--QSDFIIITSAL 106 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~---------G~~vv~~~~r~~~~~---a~~~g~~--~~sl~ell~--~aDvVil~lPl 106 (274)
.+|||||+|.||+.-++.++.. +++++.+.++..... +.+.++. +.+++++++ +.|+|++++|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 4899999999999988888653 455666655554322 4566764 348999996 57999999996
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcC-CCchhcHHHHHhhhhhhhhe
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTS-RGQLVDQEALIDFIADIRVI 152 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~-RG~iVde~aL~~~L~~~~i~ 152 (274)
..... +-...++.=| .+++--- --.+-+.++|++..++.|+.
T Consensus 107 ~~H~~--~~~~al~aGk--hVl~EKP~a~~~~ea~~l~~~a~~~g~~ 149 (412)
T 4gqa_A 107 HLHYT--MAMAAIAAGK--HVYCEKPLAVNEQQAQEMAQAARRAGVK 149 (412)
T ss_dssp GGHHH--HHHHHHHTTC--EEEEESCSCSSHHHHHHHHHHHHHHTCC
T ss_pred HHHHH--HHHHHHHcCC--CeEeecCCcCCHHHHHHHHHHHHHhCCe
Confidence 43322 2223333222 2333321 12334555666665555553
No 279
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.78 E-value=0.0049 Score=59.11 Aligned_cols=114 Identities=10% Similarity=0.210 Sum_probs=76.0
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCC--------Chh-----HhhcC-Cc--ccCHHHHh-cccCE
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSK--------KPE-----ADKRG-AE--HTNIDDLC-KQSDF 99 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~--------~~~-----a~~~g-~~--~~sl~ell-~~aDv 99 (274)
|.+|+|++|.|.|+|++|+.+|+.|...|++++...++.. ... ....+ +. ..+-++++ ..||+
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DV 292 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEV 292 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSE
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceE
Confidence 5689999999999999999999999999998874544321 111 11112 11 12223443 37999
Q ss_pred EEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheee-hhhc
Q psy3240 100 IIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISI-SMVT 158 (274)
Q Consensus 100 Vil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~-D~~~ 158 (274)
++-|.. .+.++.+..+.++ =.+++..+-+.+- .+ ..+.|.++||.++ |...
T Consensus 293 liP~A~-----~n~i~~~~A~~l~-ak~V~EgAN~p~t-~~-A~~~L~~~Gi~~~PD~~a 344 (419)
T 3aoe_E 293 LVLAAR-----EGALDGDRARQVQ-AQAVVEVANFGLN-PE-AEAYLLGKGALVVPDLLS 344 (419)
T ss_dssp EEECSC-----TTCBCHHHHTTCC-CSEEEECSTTCBC-HH-HHHHHHHHTCEEECHHHH
T ss_pred EEeccc-----ccccccchHhhCC-ceEEEECCCCcCC-HH-HHHHHHHCCCEEECHHHH
Confidence 998864 3456777777775 3588888887754 33 3466888888765 4444
No 280
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.77 E-value=0.003 Score=57.65 Aligned_cols=94 Identities=19% Similarity=0.285 Sum_probs=57.7
Q ss_pred CEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh--Hh--hc-------CC--cc-cCHHHHhcccCEEEEcCCCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE--AD--KR-------GA--EH-TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~--a~--~~-------g~--~~-~sl~ell~~aDvVil~lPlt 107 (274)
++|+|||.|.||..+|..+...|. +++.+|....+.+ .. .. .. .. .+. +.++.||+|+++++..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 689999999999999999988885 7666665443222 11 11 11 12 355 6789999999998542
Q ss_pred cc-----------cHHhcc--HHHHhcCCCCcEEEEcCCCchhcH
Q psy3240 108 PD-----------THHLIN--RARLESMKPGAILINTSRGQLVDQ 139 (274)
Q Consensus 108 ~~-----------T~~li~--~~~l~~mk~gailINv~RG~iVde 139 (274)
.. +..++. .+.+....|++++++++ .++|.
T Consensus 82 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t--NPv~~ 124 (309)
T 1ur5_A 82 RKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN--NPLDA 124 (309)
T ss_dssp -------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC--SSHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC--CchHH
Confidence 21 011111 12233345899999974 34443
No 281
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.76 E-value=0.005 Score=56.83 Aligned_cols=89 Identities=21% Similarity=0.184 Sum_probs=63.5
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc--------CHHHHhc-----ccCEEEEcCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT--------NIDDLCK-----QSDFIIITSA 105 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~--------sl~ell~-----~aDvVil~lP 105 (274)
.|++|.|+|.|.+|...++.++.+|+ ++++.+.+..+.+ +++.|+..+ ++.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 58999999999999999999999999 5556554444444 666776431 2333332 4899999886
Q ss_pred CCcccHHhccHHHHhcCCCC-cEEEEcCCC
Q psy3240 106 LTPDTHHLINRARLESMKPG-AILINTSRG 134 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~g-ailINv~RG 134 (274)
..+. -...++.++++ ..++.++-.
T Consensus 272 ~~~~-----~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 272 NVGV-----MRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSCC
T ss_pred CHHH-----HHHHHHHhhcCCcEEEEEcCC
Confidence 4221 24567888998 899988753
No 282
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.76 E-value=0.0056 Score=58.20 Aligned_cols=106 Identities=16% Similarity=0.200 Sum_probs=66.8
Q ss_pred CCEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh---Hh---hcC---Cc-cc----CHHHHhc--ccCEEEEcC
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE---AD---KRG---AE-HT----NIDDLCK--QSDFIIITS 104 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~---a~---~~g---~~-~~----sl~ell~--~aDvVil~l 104 (274)
-.+|||||+|.||+..++.++.. +++++.+.++..... +. +.| .. +. +++++++ +.|+|++++
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcC
Confidence 45899999999999999998875 666666665554322 11 234 22 34 8999997 589999999
Q ss_pred CCCcccHHhccHHHHhcCCCCc-EEEEc-CCCchhcHHHHHhhhhhhhhe
Q psy3240 105 ALTPDTHHLINRARLESMKPGA-ILINT-SRGQLVDQEALIDFIADIRVI 152 (274)
Q Consensus 105 Plt~~T~~li~~~~l~~mk~ga-ilINv-~RG~iVde~aL~~~L~~~~i~ 152 (274)
|........ ... |+.|. +++.- ..-.+-+.++|++..++.|+.
T Consensus 100 p~~~h~~~~--~~a---l~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~ 144 (444)
T 2ixa_A 100 PWEWHHEHG--VAA---MKAGKIVGMEVSGAITLEECWDYVKVSEQTGVP 144 (444)
T ss_dssp CGGGHHHHH--HHH---HHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCC
T ss_pred CcHHHHHHH--HHH---HHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCe
Confidence 964332222 223 34454 44442 122344666777777776654
No 283
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.74 E-value=0.0038 Score=60.13 Aligned_cols=103 Identities=19% Similarity=0.279 Sum_probs=71.7
Q ss_pred CCCCCCCEEEEEccC----------hHHHHHHHHHccCCCeEEEEeCCCCChhHhhc-CCccc-CHHHHhcccCEEEEcC
Q psy3240 37 GPALQNSTVGIVGCG----------RIGLSVLEKLIPYKVSKFLYTSRSKKPEADKR-GAEHT-NIDDLCKQSDFIIITS 104 (274)
Q Consensus 37 g~~L~gktVGIIGlG----------~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~-g~~~~-sl~ell~~aDvVil~l 104 (274)
|..++|++|+|+|+- .-...+++.|...|+++.+||+.......... ++..+ ++++.++.+|+|++++
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 396 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVT 396 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECS
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEee
Confidence 457899999999997 67899999999999988888876532112222 45554 7899999999999988
Q ss_pred CCCcccHHhccHHHH-hcCCCCcEEEEcCCCchhcHHHHHh
Q psy3240 105 ALTPDTHHLINRARL-ESMKPGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 105 Plt~~T~~li~~~~l-~~mk~gailINv~RG~iVde~aL~~ 144 (274)
+-. +-+. ++.+.+ +.|+ +.+++|+ |+- .|.+.+.+
T Consensus 397 ~~~-~f~~-~d~~~~~~~~~-~~~i~D~-r~~-~~~~~~~~ 432 (446)
T 4a7p_A 397 EWD-AFRA-LDLTRIKNSLK-SPVLVDL-RNI-YPPAELER 432 (446)
T ss_dssp CCT-TTTS-CCHHHHHTTBS-SCBEECS-SCC-SCHHHHHH
T ss_pred CCH-Hhhc-CCHHHHHHhcC-CCEEEEC-CCC-CCHHHHHh
Confidence 753 2222 344444 4455 4678886 543 56665544
No 284
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.73 E-value=0.0049 Score=51.41 Aligned_cols=94 Identities=14% Similarity=0.174 Sum_probs=59.0
Q ss_pred CEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcc--cCHH----HHhcccCEEEEcCCCCcccHH---
Q psy3240 43 STVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEH--TNID----DLCKQSDFIIITSALTPDTHH--- 112 (274)
Q Consensus 43 ktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~--~sl~----ell~~aDvVil~lPlt~~T~~--- 112 (274)
++|.|.| .|.||+.+++.|...|.++++.+++..+......++.. .++. +.+..+|+|+.+.........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 80 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV 80 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHH
Confidence 4799999 59999999999999999877777654332211133332 1222 678899999998876433211
Q ss_pred hccHHHHhcCCC--CcEEEEcCCCch
Q psy3240 113 LINRARLESMKP--GAILINTSRGQL 136 (274)
Q Consensus 113 li~~~~l~~mk~--gailINv~RG~i 136 (274)
......++.|++ ...+|++|+...
T Consensus 81 ~~~~~l~~a~~~~~~~~~v~~SS~~~ 106 (221)
T 3ew7_A 81 TSLDHLISVLNGTVSPRLLVVGGAAS 106 (221)
T ss_dssp HHHHHHHHHHCSCCSSEEEEECCCC-
T ss_pred HHHHHHHHHHHhcCCceEEEEecceE
Confidence 112344555543 367777776543
No 285
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.73 E-value=0.0068 Score=49.82 Aligned_cols=66 Identities=18% Similarity=0.299 Sum_probs=46.5
Q ss_pred CCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChhHh-hcCCcc--------cCHHHHhcccCEEEEcCCCC
Q psy3240 42 NSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPEAD-KRGAEH--------TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 42 gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~-~~g~~~--------~sl~ell~~aDvVil~lPlt 107 (274)
+++|.|.|. |.||+.+++.|...|.++++.+++..+.... ..++.. .++.++++.+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 479999997 9999999999999999777776654321110 112221 14556788899999988654
No 286
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.73 E-value=0.0065 Score=57.37 Aligned_cols=108 Identities=15% Similarity=0.186 Sum_probs=66.6
Q ss_pred CCCEEEEEccCh---HHHHHHHHHccCC-CeEEE-EeCCCCCh-h--HhhcCCc----ccCHHHHhcc-------cCEEE
Q psy3240 41 QNSTVGIVGCGR---IGLSVLEKLIPYK-VSKFL-YTSRSKKP-E--ADKRGAE----HTNIDDLCKQ-------SDFII 101 (274)
Q Consensus 41 ~gktVGIIGlG~---IG~~iA~~L~~~G-~~vv~-~~~r~~~~-~--a~~~g~~----~~sl~ell~~-------aDvVi 101 (274)
+-.+|||||+|. ||+..+..++..+ ++++. +.++.... . +.+.|+. +.+++++++. .|+|+
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~ 115 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVA 115 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEE
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEE
Confidence 345899999999 9999988887665 55553 44444322 2 4556773 3489999976 89999
Q ss_pred EcCCCCcccHHhccHHHHhcCCCCc-EEEEcC-CCchhcHHHHHhhhhhhhhee
Q psy3240 102 ITSALTPDTHHLINRARLESMKPGA-ILINTS-RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 102 l~lPlt~~T~~li~~~~l~~mk~ga-ilINv~-RG~iVde~aL~~~L~~~~i~~ 153 (274)
+++|...... +-...+ +.|. +++.-- .-.+-+.++|++..++.|+.+
T Consensus 116 I~tp~~~H~~--~~~~al---~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 164 (417)
T 3v5n_A 116 IVTPNHVHYA--AAKEFL---KRGIHVICDKPLTSTLADAKKLKKAADESDALF 164 (417)
T ss_dssp ECSCTTSHHH--HHHHHH---TTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCE
T ss_pred ECCCcHHHHH--HHHHHH---hCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEE
Confidence 9999743322 222333 4443 444421 234446667777666666643
No 287
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.72 E-value=0.005 Score=56.80 Aligned_cols=88 Identities=19% Similarity=0.176 Sum_probs=62.4
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc--------CHHHHhc-----ccCEEEEcCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT--------NIDDLCK-----QSDFIIITSA 105 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~--------sl~ell~-----~aDvVil~lP 105 (274)
.|++|.|+|.|.+|..+++.++.+|+ ++++.+.+..+.+ +++.|+..+ ++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 58999999999999999999999999 5556554444444 666776431 2333332 4899999886
Q ss_pred CCcccHHhccHHHHhcCCCC-cEEEEcCC
Q psy3240 106 LTPDTHHLINRARLESMKPG-AILINTSR 133 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~g-ailINv~R 133 (274)
..+. -...++.++++ ..++.++-
T Consensus 271 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 RLDT-----MVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CHHH-----HHHHHHHBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhcCCcEEEEecc
Confidence 4221 13567778998 88888874
No 288
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.72 E-value=0.0036 Score=56.92 Aligned_cols=106 Identities=16% Similarity=0.042 Sum_probs=67.2
Q ss_pred CEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh--Hhhc-CCc-ccCHHHHh----------cccCEEEEcCCCC
Q psy3240 43 STVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKR-GAE-HTNIDDLC----------KQSDFIIITSALT 107 (274)
Q Consensus 43 ktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~-g~~-~~sl~ell----------~~aDvVil~lPlt 107 (274)
.+|||||+ |.||+..++.++..+.+++.+.++..... +... +.. +.++++++ .+.|+|++++|..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCch
Confidence 58999999 78999999999988887776665554333 2222 233 24888887 5789999999963
Q ss_pred cccHHhccHHHHhcCCCCc-EEEEcC-CCchhcHHHHHhhhhhhhhee
Q psy3240 108 PDTHHLINRARLESMKPGA-ILINTS-RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~ga-ilINv~-RG~iVde~aL~~~L~~~~i~~ 153 (274)
.. .-+-...++ .|. +++.-- --.+-+.++|++..+++|+.+
T Consensus 84 ~H--~~~~~~al~---aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~ 126 (312)
T 3o9z_A 84 LH--YPQIRMALR---LGANALSEKPLVLWPEEIARLKELEARTGRRV 126 (312)
T ss_dssp GH--HHHHHHHHH---TTCEEEECSSSCSCHHHHHHHHHHHHHHCCCE
T ss_pred hh--HHHHHHHHH---CCCeEEEECCCCCCHHHHHHHHHHHHHcCCEE
Confidence 32 222233443 333 444321 223446667777766666643
No 289
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.71 E-value=0.0056 Score=56.50 Aligned_cols=88 Identities=17% Similarity=0.171 Sum_probs=62.7
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc--------CHHHHhc-----ccCEEEEcCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT--------NIDDLCK-----QSDFIIITSA 105 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~--------sl~ell~-----~aDvVil~lP 105 (274)
.|++|.|+|.|.+|...++.++.+|+ ++++.+.+..+.+ +++.|+..+ ++.+.+. ..|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 58999999999999999999999999 5556555444444 667776432 2333332 4899999886
Q ss_pred CCcccHHhccHHHHhcCCCC-cEEEEcCC
Q psy3240 106 LTPDTHHLINRARLESMKPG-AILINTSR 133 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~g-ailINv~R 133 (274)
..+. -...++.++++ ..++.++-
T Consensus 275 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TAQT-----LKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECCC
T ss_pred CHHH-----HHHHHHHhhcCCCEEEEECC
Confidence 4221 23567888998 88888875
No 290
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.71 E-value=0.0024 Score=58.71 Aligned_cols=88 Identities=23% Similarity=0.226 Sum_probs=64.6
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-Hh-hcCCccc----CH---HHHhcccCEEEEcCCCCcccH
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-AD-KRGAEHT----NI---DDLCKQSDFIIITSALTPDTH 111 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~-~~g~~~~----sl---~ell~~aDvVil~lPlt~~T~ 111 (274)
.|.+|.|+|.|.+|...++.++.+|+++++.+.+..+.+ +. +.|+..+ +. .++....|+|+-++......
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~~- 258 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHAL- 258 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCCS-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHHH-
Confidence 789999999999999999999999997777776555444 44 6776532 22 22334589999988753322
Q ss_pred HhccHHHHhcCCCCcEEEEcCC
Q psy3240 112 HLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~R 133 (274)
...++.++++..++.++.
T Consensus 259 ----~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 259 ----EPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ----HHHHTTEEEEEEEEECSC
T ss_pred ----HHHHHHhccCCEEEEeCC
Confidence 355678899999999875
No 291
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.71 E-value=0.0027 Score=55.54 Aligned_cols=90 Identities=14% Similarity=0.060 Sum_probs=58.3
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-----CHHHHhcccCEEEEcCCCCcc----cH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-----NIDDLCKQSDFIIITSALTPD----TH 111 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-----sl~ell~~aDvVil~lPlt~~----T~ 111 (274)
.++|.|.|.|.||+.+++.|...|.++++.+++..+.. ....+++.. +++ +..+|+|+.+...... ++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~~~~~~~~~ 82 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPDSGGDPVLA 82 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCBTTBCHHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCccccccHHHH
Confidence 47999999999999999999999998777776554333 223344321 333 7889999998875432 33
Q ss_pred HhccHHHHhcCC-CCcEEEEcCCCc
Q psy3240 112 HLINRARLESMK-PGAILINTSRGQ 135 (274)
Q Consensus 112 ~li~~~~l~~mk-~gailINv~RG~ 135 (274)
.+++. +...+ .-..||.+|+..
T Consensus 83 ~l~~a--~~~~~~~~~~~v~~Ss~~ 105 (286)
T 3ius_A 83 ALGDQ--IAARAAQFRWVGYLSTTA 105 (286)
T ss_dssp HHHHH--HHHTGGGCSEEEEEEEGG
T ss_pred HHHHH--HHhhcCCceEEEEeecce
Confidence 44422 22221 224677777644
No 292
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.71 E-value=0.0011 Score=60.58 Aligned_cols=66 Identities=14% Similarity=0.184 Sum_probs=46.6
Q ss_pred CEEEEEccChHHHHHHHHHccC--------CCeEEEEeCCCCCh-h--HhhcCCc--ccCHHHHhcc--cCEEEEcCCCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY--------KVSKFLYTSRSKKP-E--ADKRGAE--HTNIDDLCKQ--SDFIIITSALT 107 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~--------G~~vv~~~~r~~~~-~--a~~~g~~--~~sl~ell~~--aDvVil~lPlt 107 (274)
-+|||||+|.||+.-++.++.. +++++.+.++.... . +.+.|+. +.+++++++. .|+|++++|..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGD 86 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 5899999999999888776542 23555555554432 2 4556764 3489999964 79999999964
Q ss_pred c
Q psy3240 108 P 108 (274)
Q Consensus 108 ~ 108 (274)
-
T Consensus 87 ~ 87 (390)
T 4h3v_A 87 S 87 (390)
T ss_dssp G
T ss_pred H
Confidence 3
No 293
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.69 E-value=0.0048 Score=57.67 Aligned_cols=86 Identities=14% Similarity=0.207 Sum_probs=54.7
Q ss_pred CCCEEEEEc-cChHHHHHHHHHccCC-CeEEEEeCCCCChh--Hhh----cC-----CcccCHHHHhcccCEEEEcCCCC
Q psy3240 41 QNSTVGIVG-CGRIGLSVLEKLIPYK-VSKFLYTSRSKKPE--ADK----RG-----AEHTNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 41 ~gktVGIIG-lG~IG~~iA~~L~~~G-~~vv~~~~r~~~~~--a~~----~g-----~~~~sl~ell~~aDvVil~lPlt 107 (274)
...+|+|+| .|.||+.+++.|.... ++++...++..... ... .+ ....+ ++.+..+|+|+.|+|..
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~ 93 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHG 93 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTT
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCch
Confidence 346899999 8999999999998654 45555554432211 111 11 11113 45567899999999964
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~R 133 (274)
.. .+.....+.|+.+|+.+.
T Consensus 94 ~s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 94 TT------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp TH------HHHHHTSCTTCEEEECSS
T ss_pred hH------HHHHHHHhCCCEEEECCc
Confidence 32 222223377899999875
No 294
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.68 E-value=0.0041 Score=57.08 Aligned_cols=89 Identities=17% Similarity=0.231 Sum_probs=63.1
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc---C---HHH----Hh----cccCEEEEcC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT---N---IDD----LC----KQSDFIIITS 104 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~---s---l~e----ll----~~aDvVil~l 104 (274)
.|.+|.|+|.|.+|...++.++.+|+ ++++.+.+..+.+ +++.|+..+ + .++ +. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 58899999999999999999999999 6666665444434 666777431 2 122 21 2489999988
Q ss_pred CCCcccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 105 ALTPDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 105 Plt~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
..... + ...++.++++..++.++..
T Consensus 251 g~~~~----~-~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 251 GAEAS----I-QAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp CCHHH----H-HHHHHHSCTTCEEEECSCC
T ss_pred CChHH----H-HHHHHHhcCCCEEEEEecC
Confidence 64221 1 3567788999999998753
No 295
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.68 E-value=0.0034 Score=58.36 Aligned_cols=65 Identities=15% Similarity=0.206 Sum_probs=47.0
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcC-C---ccc---CHHHHhcccCEEEE
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRG-A---EHT---NIDDLCKQSDFIII 102 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g-~---~~~---sl~ell~~aDvVil 102 (274)
..+.+++|+|+|.|.+|+.+++.++.+|++++++++....+...-.. . .+. .+.++++++|+|+.
T Consensus 8 ~~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 8 KLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 45789999999999999999999999999888888654433211100 0 111 35667888999865
No 296
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.68 E-value=0.0013 Score=60.21 Aligned_cols=89 Identities=17% Similarity=0.148 Sum_probs=63.2
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc------CHHHHhc------ccCEEEEcCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT------NIDDLCK------QSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~------sl~ell~------~aDvVil~lPl 106 (274)
.|++|.|+|.|.+|..+++.++.+|+ ++++.+.+..+.+ +.+.|+... ++.+.+. ..|+|+.++..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 78999999999999999999999999 7776665443333 556666421 3333322 48999998874
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
.+. -...++.++++..++.++..
T Consensus 247 ~~~-----~~~~~~~l~~~G~iv~~g~~ 269 (348)
T 2d8a_A 247 PKA-----LEQGLQAVTPAGRVSLLGLY 269 (348)
T ss_dssp HHH-----HHHHHHHEEEEEEEEECCCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEccC
Confidence 222 13556778899999998753
No 297
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.68 E-value=0.0012 Score=57.45 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=44.6
Q ss_pred CCEEEEEccChHHHHHHHH--HccCCCeEEEEeCCCCChh-HhhcCCc---ccCHHHHhc-ccCEEEEcCCCC
Q psy3240 42 NSTVGIVGCGRIGLSVLEK--LIPYKVSKFLYTSRSKKPE-ADKRGAE---HTNIDDLCK-QSDFIIITSALT 107 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~--L~~~G~~vv~~~~r~~~~~-a~~~g~~---~~sl~ell~-~aDvVil~lPlt 107 (274)
.++|+|||+|.+|+.+|+. ... |++++++.+..+... ....|+. ..+++++++ +.|+|++++|..
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPRE 151 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCch
Confidence 3689999999999999996 334 787666554433322 1122322 237888886 589999999963
No 298
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.68 E-value=0.0051 Score=56.71 Aligned_cols=88 Identities=17% Similarity=0.141 Sum_probs=62.8
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc--------CHHHHhc-----ccCEEEEcCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT--------NIDDLCK-----QSDFIIITSA 105 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~--------sl~ell~-----~aDvVil~lP 105 (274)
.|++|.|+|.|.+|...++.++.+|+ ++++.+.+..+.+ +++.|+..+ ++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 58999999999999999999999999 5555554444444 667777532 2333332 4899999886
Q ss_pred CCcccHHhccHHHHhcCCCC-cEEEEcCC
Q psy3240 106 LTPDTHHLINRARLESMKPG-AILINTSR 133 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~g-ailINv~R 133 (274)
..+. -...++.++++ ..++.++-
T Consensus 271 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 RIET-----MMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECCC
T ss_pred CHHH-----HHHHHHHHhcCCCEEEEEcc
Confidence 4221 24567888998 88988874
No 299
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.68 E-value=0.003 Score=60.58 Aligned_cols=114 Identities=17% Similarity=0.212 Sum_probs=73.4
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCC---------ChhHh----hcCC------------ccc-CH
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSK---------KPEAD----KRGA------------EHT-NI 90 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~---------~~~a~----~~g~------------~~~-sl 90 (274)
|.+++|++|.|.|+|++|+.+|+.|...|++++...+... ..... ..+. ... +.
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~ 284 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNP 284 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSST
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCc
Confidence 5689999999999999999999999999998875555421 11111 1111 222 33
Q ss_pred HHHhc-ccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheee-hhhc
Q psy3240 91 DDLCK-QSDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISI-SMVT 158 (274)
Q Consensus 91 ~ell~-~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~-D~~~ 158 (274)
++++. .||+++-|.-. +.|+.+..+.++ =.+++--+-+.+- .++ .+.|.++|+.++ |...
T Consensus 285 ~~~~~~~~Dil~P~A~~-----~~I~~~~a~~l~-ak~V~EgAN~p~t-~~a-~~~l~~~Gi~~~PD~~a 346 (421)
T 1v9l_A 285 DAIFKLDVDIFVPAAIE-----NVIRGDNAGLVK-ARLVVEGANGPTT-PEA-ERILYERGVVVVPDILA 346 (421)
T ss_dssp TGGGGCCCSEEEECSCS-----SCBCTTTTTTCC-CSEEECCSSSCBC-HHH-HHHHHTTTCEEECHHHH
T ss_pred hhhhcCCccEEEecCcC-----CccchhhHHHcC-ceEEEecCCCcCC-HHH-HHHHHHCCCEEeChHHh
Confidence 55553 69999887732 345666666664 3567777766653 333 356777777655 4443
No 300
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.67 E-value=0.0043 Score=57.42 Aligned_cols=110 Identities=20% Similarity=0.221 Sum_probs=67.3
Q ss_pred CEEEEEccChHHHHHHHHHcc---------CCCeEEEEeCCCCCh------h---Hh--hcCCccc--CHHHHhc--ccC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIP---------YKVSKFLYTSRSKKP------E---AD--KRGAEHT--NIDDLCK--QSD 98 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~---------~G~~vv~~~~r~~~~------~---a~--~~g~~~~--sl~ell~--~aD 98 (274)
.+|||||+|.||+.+++.++. .+.+++...++.... . .. ..+..+. +++++++ +.|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 479999999999999999975 466666665554321 0 00 1122222 8899886 489
Q ss_pred EEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchh-cHHHHHhhhhhhhhee
Q psy3240 99 FIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLV-DQEALIDFIADIRVIS 153 (274)
Q Consensus 99 vVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iV-de~aL~~~L~~~~i~~ 153 (274)
+|+.++|....... .-.-....|+.|.-+|-..-+.+. ..+.|.+..+++|+.+
T Consensus 83 vVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~ 137 (327)
T 3do5_A 83 VLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRL 137 (327)
T ss_dssp EEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCE
T ss_pred EEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcE
Confidence 99999996432111 112234456777777766444443 4567777666666643
No 301
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.67 E-value=0.0042 Score=58.19 Aligned_cols=94 Identities=18% Similarity=0.204 Sum_probs=61.6
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc------CHHHHh------cccCEEEEcCC
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT------NIDDLC------KQSDFIIITSA 105 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~------sl~ell------~~aDvVil~lP 105 (274)
-.|.+|.|+|.|.+|...++.++.+|+ ++++.+.+..+.+ +++.|+..+ ++.+.+ ...|+|+-++.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 468999999999999999999999999 5555554443434 667776532 333322 14899999887
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
....+...+..-....++++..++.++-
T Consensus 292 ~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 292 VPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 5322221111111133489999999874
No 302
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.67 E-value=0.0026 Score=58.41 Aligned_cols=96 Identities=19% Similarity=0.168 Sum_probs=57.3
Q ss_pred CCEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hh--hcCC------cc-cCHHHHhcccCEEEEcCCCCc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--AD--KRGA------EH-TNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~--~~g~------~~-~sl~ell~~aDvVil~lPlt~ 108 (274)
.++|+|||.|.+|.++|..|...|. +++.+|....+.+ +. .... .. .+..+.++.||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4689999999999999999987776 6788876543322 11 1111 11 123567899999999997532
Q ss_pred ccHHh------------cc--HHHHhcCCCCcEEEEcCCCchhcHH
Q psy3240 109 DTHHL------------IN--RARLESMKPGAILINTSRGQLVDQE 140 (274)
Q Consensus 109 ~T~~l------------i~--~~~l~~mk~gailINv~RG~iVde~ 140 (274)
..+. +. .+.+....|++++|+++ .++|.-
T Consensus 87 -k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~ 129 (318)
T 1y6j_A 87 -KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS--NPVDII 129 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS--SSHHHH
T ss_pred -CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec--CcHHHH
Confidence 1111 10 11233336899999973 445443
No 303
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.67 E-value=0.0046 Score=56.97 Aligned_cols=88 Identities=19% Similarity=0.183 Sum_probs=62.7
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc--------CHHHHhc-----ccCEEEEcCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT--------NIDDLCK-----QSDFIIITSA 105 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~--------sl~ell~-----~aDvVil~lP 105 (274)
.|++|.|+|.|.+|...++.++.+|+ ++++.+.+..+.+ +++.|+..+ ++.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 5555554444444 566776431 2333332 4899999886
Q ss_pred CCcccHHhccHHHHhcCCCC-cEEEEcCC
Q psy3240 106 LTPDTHHLINRARLESMKPG-AILINTSR 133 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~g-ailINv~R 133 (274)
..+. -...++.++++ ..++.++-
T Consensus 270 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NVKV-----MRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred cHHH-----HHHHHHhhccCCcEEEEEec
Confidence 4221 24567888998 89998874
No 304
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.65 E-value=0.0071 Score=55.48 Aligned_cols=94 Identities=14% Similarity=0.185 Sum_probs=71.3
Q ss_pred CCCCCEEEEEcc---ChHHHHHHHHHccC-CCeEEEEeCCCCChh---HhhcCCcc---cCHHHHhcccCEEEEcCCCCc
Q psy3240 39 ALQNSTVGIVGC---GRIGLSVLEKLIPY-KVSKFLYTSRSKKPE---ADKRGAEH---TNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 39 ~L~gktVGIIGl---G~IG~~iA~~L~~~-G~~vv~~~~r~~~~~---a~~~g~~~---~sl~ell~~aDvVil~lPlt~ 108 (274)
.+.|++|+++|= +++..+++..+..+ |+++.+..+..-.+. ..+.|... .+++|+++.+|+|..-.--.+
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~e 225 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKE 225 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCST
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccc
Confidence 589999999996 69999999999999 997777666443222 23445542 389999999999998654331
Q ss_pred c------c-----HHhccHHHHhcCCCCcEEEEcC
Q psy3240 109 D------T-----HHLINRARLESMKPGAILINTS 132 (274)
Q Consensus 109 ~------T-----~~li~~~~l~~mk~gailINv~ 132 (274)
. . ..-++.+.++.+||+++|.-+.
T Consensus 226 r~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 260 (299)
T 1pg5_A 226 RFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPL 260 (299)
T ss_dssp TSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCS
T ss_pred cccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCC
Confidence 1 1 2346889999999999999986
No 305
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.64 E-value=0.0042 Score=56.61 Aligned_cols=107 Identities=10% Similarity=-0.008 Sum_probs=66.7
Q ss_pred CEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh--Hhhc-CCcc-cCHHHHh-----------cccCEEEEcCCC
Q psy3240 43 STVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKR-GAEH-TNIDDLC-----------KQSDFIIITSAL 106 (274)
Q Consensus 43 ktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~-g~~~-~sl~ell-----------~~aDvVil~lPl 106 (274)
.+|||||+ |.||+..++.++..+.+++.+.++..... +... +... .++++++ .+.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 58999999 79999999999988887776665554333 2222 3332 4888887 568999999996
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcC-CCchhcHHHHHhhhhhhhhee
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTS-RGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~-RG~iVde~aL~~~L~~~~i~~ 153 (274)
..... +-...++.=| .+++.-- --.+-+.++|++..+++|+.+
T Consensus 84 ~~H~~--~~~~al~aGk--hVl~EKPla~~~~ea~~l~~~a~~~g~~~ 127 (318)
T 3oa2_A 84 YLHYP--HIAAGLRLGC--DVICEKPLVPTPEMLDQLAVIERETDKRL 127 (318)
T ss_dssp GGHHH--HHHHHHHTTC--EEEECSSCCSCHHHHHHHHHHHHHHTCCE
T ss_pred HHHHH--HHHHHHHCCC--eEEEECCCcCCHHHHHHHHHHHHHhCCEE
Confidence 43322 2233443322 2444321 223446667777666666643
No 306
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=96.64 E-value=0.013 Score=54.40 Aligned_cols=124 Identities=20% Similarity=0.216 Sum_probs=82.8
Q ss_pred hhhccchhccCCCCccCCCC----------CCCCCCCCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh--H-
Q psy3240 15 KYVSTPVSCRGEWKSWAPNF----------MCGPALQNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--A- 80 (274)
Q Consensus 15 r~~~~~~~~~~~w~~~~~~~----------~~g~~L~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a- 80 (274)
+|..-|+...|. ...+|.. ..| .+.|++|++|| .+++..+.+..+..+|+++.+..+..-.+. .
T Consensus 122 ~~~~vPVINag~-~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~ 199 (323)
T 3gd5_A 122 HYAGIPVINALT-DHEHPCQVVADLLTIRENFG-RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVS 199 (323)
T ss_dssp HHHCSCEEEEEC-SSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHH
T ss_pred HhCCCCEEeCCC-CCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHH
Confidence 455666666665 3344421 013 58999999999 579999999999999997777766543221 1
Q ss_pred -------hhcCCc--c-cCHHHHhcccCEEEEcCCCCc-------cc-----HHhccHHHHhcCCCCcEEEEcC---CCc
Q psy3240 81 -------DKRGAE--H-TNIDDLCKQSDFIIITSALTP-------DT-----HHLINRARLESMKPGAILINTS---RGQ 135 (274)
Q Consensus 81 -------~~~g~~--~-~sl~ell~~aDvVil~lPlt~-------~T-----~~li~~~~l~~mk~gailINv~---RG~ 135 (274)
.+.|.. . .+++|+++.+|+|..-.=-.. +- ..-++.+.++.+||+++|.-+. ||.
T Consensus 200 ~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHclPa~Rg~ 279 (323)
T 3gd5_A 200 ARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGE 279 (323)
T ss_dssp HHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTT
T ss_pred HHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCCCCCCCc
Confidence 123433 2 389999999999988542111 11 1246899999999999999875 665
Q ss_pred hhcHH
Q psy3240 136 LVDQE 140 (274)
Q Consensus 136 iVde~ 140 (274)
=|+.+
T Consensus 280 EI~~e 284 (323)
T 3gd5_A 280 EITDE 284 (323)
T ss_dssp TBCHH
T ss_pred eeCHH
Confidence 44433
No 307
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.63 E-value=0.0081 Score=50.35 Aligned_cols=92 Identities=9% Similarity=0.097 Sum_probs=58.6
Q ss_pred CEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc--cCHH----HHhcccCEEEEcCCCC--cc--c
Q psy3240 43 STVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH--TNID----DLCKQSDFIIITSALT--PD--T 110 (274)
Q Consensus 43 ktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~--~sl~----ell~~aDvVil~lPlt--~~--T 110 (274)
++|.|.|. |.||+.+++.|...|.++++.+++..+.. ....++.. .++. +.+..+|+|+.+.... +. .
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 47999997 99999999999999998777765533222 11123332 1222 6788999999988653 11 1
Q ss_pred HHh-ccHHHHhcCC-CCcEEEEcCCC
Q psy3240 111 HHL-INRARLESMK-PGAILINTSRG 134 (274)
Q Consensus 111 ~~l-i~~~~l~~mk-~gailINv~RG 134 (274)
.++ .....++.|+ .+..+|++|+.
T Consensus 81 ~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp HHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 111 1244566665 34778888764
No 308
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.62 E-value=0.0023 Score=59.26 Aligned_cols=100 Identities=18% Similarity=0.159 Sum_probs=60.6
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hh--hc------CCcc-cCHHHHhcccCEEEEcCC
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--AD--KR------GAEH-TNIDDLCKQSDFIIITSA 105 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~--~~------g~~~-~sl~ell~~aDvVil~lP 105 (274)
.-.+++|+|||.|.||.++|..|...|. +++++|....+.. +. .. .... .+..+.++.||+|+++..
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAG 85 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCC
Confidence 3467899999999999999999986665 5677775433222 11 11 1111 244678999999999875
Q ss_pred CCcc---cHH-hc--c-------HHHHhcCCCCcEEEEcCCCchhcHH
Q psy3240 106 LTPD---THH-LI--N-------RARLESMKPGAILINTSRGQLVDQE 140 (274)
Q Consensus 106 lt~~---T~~-li--~-------~~~l~~mk~gailINv~RG~iVde~ 140 (274)
.... ++. ++ | .+.+....|++++++++ .++|.-
T Consensus 86 ~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt--NPvdi~ 131 (326)
T 3vku_A 86 APQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVDIL 131 (326)
T ss_dssp CC----------------CHHHHHHHHHTTTCCSEEEECS--SSHHHH
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc--CchHHH
Confidence 3211 121 22 1 12344456899999996 455543
No 309
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.62 E-value=0.015 Score=53.47 Aligned_cols=100 Identities=17% Similarity=0.235 Sum_probs=73.3
Q ss_pred CCCCCEEEEEccC--hHHHHHHHHHccCCCeEEEEeCCCCChh--H----h----hcCCc---ccCHHHHhcccCEEEEc
Q psy3240 39 ALQNSTVGIVGCG--RIGLSVLEKLIPYKVSKFLYTSRSKKPE--A----D----KRGAE---HTNIDDLCKQSDFIIIT 103 (274)
Q Consensus 39 ~L~gktVGIIGlG--~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a----~----~~g~~---~~sl~ell~~aDvVil~ 103 (274)
.+.|.+|+++|=| ++..+++..+..+|+++.+..+..-.+. . . +.|.. ..+++|+++.+|+|..-
T Consensus 145 ~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~ 224 (307)
T 2i6u_A 145 ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTD 224 (307)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEec
Confidence 5899999999975 9999999999999998777766543221 1 1 44543 24899999999999994
Q ss_pred CCC-------Ccc-----cHHhccHHHHhcCCCCcEEEEcC---CCchhc
Q psy3240 104 SAL-------TPD-----THHLINRARLESMKPGAILINTS---RGQLVD 138 (274)
Q Consensus 104 lPl-------t~~-----T~~li~~~~l~~mk~gailINv~---RG~iVd 138 (274)
.=. .++ ...-++.+.++.+||+++|.-+. ||.=|+
T Consensus 225 ~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~ 274 (307)
T 2i6u_A 225 TWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEIT 274 (307)
T ss_dssp CSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBC
T ss_pred ceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCCCCCCCcccC
Confidence 420 011 12456899999999999999986 455333
No 310
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.61 E-value=0.003 Score=55.99 Aligned_cols=36 Identities=28% Similarity=0.298 Sum_probs=30.6
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEE-EEeC
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKF-LYTS 73 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv-~~~~ 73 (274)
..|++++|.|||+|.+|..+|+.|...|...+ ++|.
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~ 60 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADD 60 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeC
Confidence 46899999999999999999999999998554 4443
No 311
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.61 E-value=0.0026 Score=58.12 Aligned_cols=91 Identities=13% Similarity=0.179 Sum_probs=55.0
Q ss_pred CCEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh-Hh---hc---CCcc-cCHHHHhcccCEEEEcCCCCc---
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE-AD---KR---GAEH-TNIDDLCKQSDFIIITSALTP--- 108 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~-a~---~~---g~~~-~sl~ell~~aDvVil~lPlt~--- 108 (274)
.++|+|||.|.||..+|..+...|. +++.+|....... +. .. .+.. .++ +.++.||+|+++.....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 4799999999999999999876666 7788876543111 11 11 1222 366 67899999999873311
Q ss_pred -------ccHHhcc--HHHHhcCCCCcEEEEcCC
Q psy3240 109 -------DTHHLIN--RARLESMKPGAILINTSR 133 (274)
Q Consensus 109 -------~T~~li~--~~~l~~mk~gailINv~R 133 (274)
.+..++. .+.+....|++++++++-
T Consensus 93 tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 93 SYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 1111111 012233348999999875
No 312
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.60 E-value=0.0029 Score=56.56 Aligned_cols=86 Identities=15% Similarity=0.150 Sum_probs=62.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-C------HHHHhcccCEEEEcCCCCcccH
Q psy3240 41 QNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-N------IDDLCKQSDFIIITSALTPDTH 111 (274)
Q Consensus 41 ~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-s------l~ell~~aDvVil~lPlt~~T~ 111 (274)
.|++|.|+|. |.+|..+++.++..|+++++.+++..+.+ +.+.|+... + +.+.+..+|+|+. +.. +.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~~-- 200 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-KE-- 200 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-TT--
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-HH--
Confidence 5889999998 99999999999999997777776554444 556776532 2 2223357899998 764 22
Q ss_pred HhccHHHHhcCCCCcEEEEcCC
Q psy3240 112 HLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~R 133 (274)
-...++.|+++..++.++.
T Consensus 201 ---~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 201 ---VEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp ---HHHHHTTEEEEEEEEEC--
T ss_pred ---HHHHHHhhccCCEEEEEeC
Confidence 2467788899999998875
No 313
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.60 E-value=0.0023 Score=58.70 Aligned_cols=106 Identities=17% Similarity=0.229 Sum_probs=65.7
Q ss_pred CCEEEEEccC-hHHHHHHHHHccC--CCeEEEEeCCCCChh---HhhcCC-c-ccCHHHHhc--ccCEEEEcCCCCcccH
Q psy3240 42 NSTVGIVGCG-RIGLSVLEKLIPY--KVSKFLYTSRSKKPE---ADKRGA-E-HTNIDDLCK--QSDFIIITSALTPDTH 111 (274)
Q Consensus 42 gktVGIIGlG-~IG~~iA~~L~~~--G~~vv~~~~r~~~~~---a~~~g~-~-~~sl~ell~--~aDvVil~lPlt~~T~ 111 (274)
-.+|||||+| .+|+..++.++.. +++++.+.++..... +...+. . +.+++++++ +.|+|++++|......
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 97 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELNLP 97 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGGHHH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchHHHH
Confidence 3589999999 8999999999876 466655655554322 344565 3 348999986 5899999999633222
Q ss_pred HhccHHHHhcCCCC-cEEEEcC-CCchhcHHHHHhhhhhhhhe
Q psy3240 112 HLINRARLESMKPG-AILINTS-RGQLVDQEALIDFIADIRVI 152 (274)
Q Consensus 112 ~li~~~~l~~mk~g-ailINv~-RG~iVde~aL~~~L~~~~i~ 152 (274)
+-...++ .| .+++.-- .-.+-+.++|++..++.|+.
T Consensus 98 --~~~~al~---aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 135 (340)
T 1zh8_A 98 --FIEKALR---KGVHVICEKPISTDVETGKKVVELSEKSEKT 135 (340)
T ss_dssp --HHHHHHH---TTCEEEEESSSSSSHHHHHHHHHHHHHCSSC
T ss_pred --HHHHHHH---CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 2223333 33 3445421 12334555666666666653
No 314
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.60 E-value=0.0019 Score=58.90 Aligned_cols=89 Identities=16% Similarity=0.198 Sum_probs=62.6
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHh----cccCEEEEcCCCCcc
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLC----KQSDFIIITSALTPD 109 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell----~~aDvVil~lPlt~~ 109 (274)
.|++|.|+|.|.||..+++.++.+|+++++.+.+..+.+ +.+.|+... ++.+.+ ...|+|+.++...+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 243 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH
Confidence 588999999999999999999999997666554433333 556666421 232222 458999998864222
Q ss_pred cHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 110 THHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 110 T~~li~~~~l~~mk~gailINv~RG 134 (274)
-...++.|+++..++.++..
T Consensus 244 -----~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 244 -----FQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp -----HHHHHHHEEEEEEEEECCCC
T ss_pred -----HHHHHHHhhcCCEEEEeccc
Confidence 24567778999999998764
No 315
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.60 E-value=0.002 Score=58.66 Aligned_cols=89 Identities=13% Similarity=0.110 Sum_probs=64.1
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHhc----ccCEEEEcCCCCc
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLCK----QSDFIIITSALTP 108 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell~----~aDvVil~lPlt~ 108 (274)
-.|++|.|+|.|.+|...++.++..|+++++.+.+..+.+ +++.|+... ++.+.+. ..|+|+.++...+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~ 244 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK 244 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH
Confidence 3689999999999999999999999997777666554444 666776431 3333332 5799998875322
Q ss_pred ccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 109 DTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~gailINv~R 133 (274)
. -...++.++++..++.++-
T Consensus 245 ~-----~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 245 A-----FSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp H-----HHHHHHHEEEEEEEEECSC
T ss_pred H-----HHHHHHHhccCCEEEEeCC
Confidence 2 2356677899999999874
No 316
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.60 E-value=0.0052 Score=57.46 Aligned_cols=88 Identities=14% Similarity=0.150 Sum_probs=54.8
Q ss_pred CCEEEEEc-cChHHHHHHHHHccCC------CeEEEEeC-CCCChhHh-------h-cCCcc--cCHHHHhcccCEEEEc
Q psy3240 42 NSTVGIVG-CGRIGLSVLEKLIPYK------VSKFLYTS-RSKKPEAD-------K-RGAEH--TNIDDLCKQSDFIIIT 103 (274)
Q Consensus 42 gktVGIIG-lG~IG~~iA~~L~~~G------~~vv~~~~-r~~~~~a~-------~-~g~~~--~sl~ell~~aDvVil~ 103 (274)
.++|+|+| .|.+|+.+.+.|...+ .+++...+ ++...... . ..... .+. +.++.+|+|++|
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~a 87 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFLA 87 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEEC
Confidence 36899999 9999999999998765 34444443 22211111 0 11111 233 345689999999
Q ss_pred CCCCcccHHhccHHHHhcCCCCcEEEEcCCCch
Q psy3240 104 SALTPDTHHLINRARLESMKPGAILINTSRGQL 136 (274)
Q Consensus 104 lPlt~~T~~li~~~~l~~mk~gailINv~RG~i 136 (274)
+|... + .+..+.++.|+.+|+.|.---
T Consensus 88 lg~~~-s-----~~~~~~~~~G~~vIDlSa~~R 114 (352)
T 2nqt_A 88 LPHGH-S-----AVLAQQLSPETLIIDCGADFR 114 (352)
T ss_dssp CTTSC-C-----HHHHHHSCTTSEEEECSSTTT
T ss_pred CCCcc-h-----HHHHHHHhCCCEEEEECCCcc
Confidence 99653 2 333333467899999875433
No 317
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=96.59 E-value=0.01 Score=54.43 Aligned_cols=102 Identities=15% Similarity=0.163 Sum_probs=74.1
Q ss_pred CCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh--H-hhcCCcc-cCHHHHhcccCEEEEcCCCC------
Q psy3240 39 ALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE--A-DKRGAEH-TNIDDLCKQSDFIIITSALT------ 107 (274)
Q Consensus 39 ~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a-~~~g~~~-~sl~ell~~aDvVil~lPlt------ 107 (274)
.+.|.+|+++|= +++.++.+..+..+|+++.+..+..-.+. . ....+.. .+++|+++.+|+|..-.=..
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~ 230 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAE 230 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC-------
T ss_pred CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccc
Confidence 589999999995 89999999999999998777766554332 1 1223443 48999999999999844211
Q ss_pred ccc------HHhccHHHHhcCCCCcEEEEcC---CCchhcHH
Q psy3240 108 PDT------HHLINRARLESMKPGAILINTS---RGQLVDQE 140 (274)
Q Consensus 108 ~~T------~~li~~~~l~~mk~gailINv~---RG~iVde~ 140 (274)
... ..-++.+.++.+||+++|.-+. ||.=|+.+
T Consensus 231 ~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~e 272 (301)
T 2ef0_A 231 REKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEE 272 (301)
T ss_dssp -CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred hhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCHH
Confidence 111 1346889999999999999987 66544443
No 318
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.59 E-value=0.0052 Score=56.84 Aligned_cols=88 Identities=26% Similarity=0.235 Sum_probs=63.3
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc--------CHHHHhc-----ccCEEEEcCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT--------NIDDLCK-----QSDFIIITSA 105 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~--------sl~ell~-----~aDvVil~lP 105 (274)
.|.+|.|+|.|.+|...++.++..|+ ++++.+.+..+.+ +++.|+..+ ++.+.+. ..|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 58999999999999999999999999 5666655555544 677777532 2333332 3899999887
Q ss_pred CCcccHHhccHHHHhcCCCC-cEEEEcCC
Q psy3240 106 LTPDTHHLINRARLESMKPG-AILINTSR 133 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~g-ailINv~R 133 (274)
..+. -...++.++++ ..++.++-
T Consensus 273 ~~~~-----~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 273 NVSV-----MRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhccCCEEEEEcc
Confidence 4221 23567788996 88888874
No 319
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.56 E-value=0.002 Score=60.51 Aligned_cols=65 Identities=18% Similarity=0.159 Sum_probs=49.4
Q ss_pred CCEEEEEccChHHHHHHHHHccC--CCeEEEEeCCCCChh---HhhcCCcc-cCHHHHhcccCEEEEcCCCC
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPY--KVSKFLYTSRSKKPE---ADKRGAEH-TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~--G~~vv~~~~r~~~~~---a~~~g~~~-~sl~ell~~aDvVil~lPlt 107 (274)
-.+|||||+| +|+.-++.++.. +++.++..++..... +.+.|+.. .++++++++.|++++++|..
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~ 77 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRST 77 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCc
Confidence 4689999999 799888888765 576676666555332 56778864 48999999999999999964
No 320
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.56 E-value=0.0054 Score=56.53 Aligned_cols=98 Identities=20% Similarity=0.266 Sum_probs=61.4
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh--Hh--hc-------CCcc--cCHHHHhcccCEEEEcCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE--AD--KR-------GAEH--TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~--a~--~~-------g~~~--~sl~ell~~aDvVil~lPl 106 (274)
..++|+|||.|.||.++|..|...|. +++.+|....+.. +. .. .... .+..+.++.||+|+++.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 45799999999999999999976665 7777776654332 11 11 1211 2335788999999999753
Q ss_pred Cc---ccHH-hc--cH-------HHHhcCCCCcEEEEcCCCchhcHH
Q psy3240 107 TP---DTHH-LI--NR-------ARLESMKPGAILINTSRGQLVDQE 140 (274)
Q Consensus 107 t~---~T~~-li--~~-------~~l~~mk~gailINv~RG~iVde~ 140 (274)
.. .++. ++ |. +.+....|++++++++ .++|.-
T Consensus 84 p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~ 128 (321)
T 3p7m_A 84 PRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDIM 128 (321)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHH
T ss_pred CCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHHH
Confidence 21 1221 11 11 1233335899999995 555543
No 321
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.55 E-value=0.0038 Score=60.62 Aligned_cols=115 Identities=10% Similarity=0.120 Sum_probs=70.9
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCC-------CC-h-h------Hhhc-------------CCccc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRS-------KK-P-E------ADKR-------------GAEHT 88 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~-------~~-~-~------a~~~-------------g~~~~ 88 (274)
|.+|+|++|.|-|+|++|+.+|+.|...|++++...+.. .- . + .+.. ++++.
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v 326 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF 326 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe
Confidence 568999999999999999999999999999877444421 00 0 0 0000 22322
Q ss_pred CHHHHh-cccCEEEEcCCCCcccHHhccHHHHhcCC--CCcEEEEcCCCchhcHHHHHhhhhhhhheee-hhhc
Q psy3240 89 NIDDLC-KQSDFIIITSALTPDTHHLINRARLESMK--PGAILINTSRGQLVDQEALIDFIADIRVISI-SMVT 158 (274)
Q Consensus 89 sl~ell-~~aDvVil~lPlt~~T~~li~~~~l~~mk--~gailINv~RG~iVde~aL~~~L~~~~i~~~-D~~~ 158 (274)
+.++++ ..||+.+-|... +.|+.+..+.+. .=.+++-.+-+.+ ..+| .+.|.++||.++ |...
T Consensus 327 ~~~~~~~~~~DI~iPcA~~-----~~I~~~na~~l~~~~ak~V~EgAN~p~-T~eA-~~~L~~rGIl~~PD~~a 393 (470)
T 2bma_A 327 PNEKPWGVPCTLAFPCATQ-----NDVDLDQAKLLQKNGCILVGEGANMPS-TVDA-INLFKSNNIIYCPSKAA 393 (470)
T ss_dssp SSCCTTSSCCSEEEECSST-----TCBCSHHHHHHHHTTCCEEECCSSSCB-CHHH-HHHHHHTTCEEECHHHH
T ss_pred cCcCeeecCccEEEecccc-----CcCCHHHHHHHHhcCcEEEEeCCCCCC-CHHH-HHHHHHCCcEEEChHHh
Confidence 223333 368998887632 445555444441 2236666666664 4444 577888887655 4433
No 322
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.55 E-value=0.0046 Score=57.21 Aligned_cols=97 Identities=19% Similarity=0.258 Sum_probs=60.5
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChhH----hhc-------CCcc-cCHHHHhcccCEEEEcCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPEA----DKR-------GAEH-TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~a----~~~-------g~~~-~sl~ell~~aDvVil~lPl 106 (274)
..++|+|||.|.||.++|..|...|. +++.+|....+... ... ++.. .+..+.++.||+|+++.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA 83 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc
Confidence 35789999999999999999987665 56777754332221 111 1111 1334678999999999864
Q ss_pred Cc---ccHH-hc--cH-------HHHhcCCCCcEEEEcCCCchhcH
Q psy3240 107 TP---DTHH-LI--NR-------ARLESMKPGAILINTSRGQLVDQ 139 (274)
Q Consensus 107 t~---~T~~-li--~~-------~~l~~mk~gailINv~RG~iVde 139 (274)
.. .++. ++ |. +.+....|++++++++ .++|.
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt--NPvd~ 127 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT--NPVDI 127 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC--ChHHH
Confidence 21 1221 12 11 2344456899999998 44543
No 323
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.55 E-value=0.0057 Score=55.93 Aligned_cols=89 Identities=20% Similarity=0.230 Sum_probs=62.5
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-------C-HHHH---h-----cccCEEEEc
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-------N-IDDL---C-----KQSDFIIIT 103 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-------s-l~el---l-----~~aDvVil~ 103 (274)
.|++|.|+|.|.+|...++.++.+|+++++.+.+..+.+ +++.|+..+ + .+++ . ...|+|+.+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 589999999999999999999999998666654443333 556676421 1 1222 2 248999998
Q ss_pred CCCCcccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 104 SALTPDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 104 lPlt~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
+..... -...++.++++..++.++..
T Consensus 248 ~g~~~~-----~~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 248 SGNEKC-----ITIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SCCHHH-----HHHHHHHSCTTCEEEECSCC
T ss_pred CCCHHH-----HHHHHHHHhcCCEEEEEecC
Confidence 864221 13567788999999998753
No 324
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.55 E-value=0.0034 Score=57.48 Aligned_cols=104 Identities=15% Similarity=0.168 Sum_probs=64.0
Q ss_pred CCCCEEEEEccChHHH-HHHHHHccC-CCeEEEEeCCCCChhHhhcCCc-ccCHHHHhcc---cCEEEEcCCCCcccHHh
Q psy3240 40 LQNSTVGIVGCGRIGL-SVLEKLIPY-KVSKFLYTSRSKKPEADKRGAE-HTNIDDLCKQ---SDFIIITSALTPDTHHL 113 (274)
Q Consensus 40 L~gktVGIIGlG~IG~-~iA~~L~~~-G~~vv~~~~r~~~~~a~~~g~~-~~sl~ell~~---aDvVil~lPlt~~T~~l 113 (274)
.+-.+|||||+|.||+ ..++.++.. +++++.+.++.... .++. +.+++++++. .|+|++++|.... .-
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~----~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H--~~ 96 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV----EGVNSYTTIEAMLDAEPSIDAVSLCMPPQYR--YE 96 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC----TTSEEESSHHHHHHHCTTCCEEEECSCHHHH--HH
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh----cCCCccCCHHHHHhCCCCCCEEEEeCCcHHH--HH
Confidence 3456999999999999 788888765 67666666655432 3554 3489999876 8999999994322 21
Q ss_pred ccHHHHhcCCCCc-EEEEcC-CCchhcHHHHHhhhhhhhhe
Q psy3240 114 INRARLESMKPGA-ILINTS-RGQLVDQEALIDFIADIRVI 152 (274)
Q Consensus 114 i~~~~l~~mk~ga-ilINv~-RG~iVde~aL~~~L~~~~i~ 152 (274)
+-...+ +.|. +++.-- --.+-+.++|++..++.|+.
T Consensus 97 ~~~~al---~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~ 134 (330)
T 4ew6_A 97 AAYKAL---VAGKHVFLEKPPGATLSEVADLEALANKQGAS 134 (330)
T ss_dssp HHHHHH---HTTCEEEECSSSCSSHHHHHHHHHHHHHHTCC
T ss_pred HHHHHH---HcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCe
Confidence 222333 3333 333321 12334555666666665553
No 325
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.53 E-value=0.0083 Score=54.54 Aligned_cols=108 Identities=13% Similarity=0.205 Sum_probs=68.1
Q ss_pred CEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcc-cCHHHHhc--ccCEEEEcCCCCcccHHhccHHH
Q psy3240 43 STVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEH-TNIDDLCK--QSDFIIITSALTPDTHHLINRAR 118 (274)
Q Consensus 43 ktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~-~sl~ell~--~aDvVil~lPlt~~T~~li~~~~ 118 (274)
.+++|+|. |++|+.+++.++..|++ +++.-.+.+....-.|+.. .+++|+.. ..|++++++|. +.+...+. +.
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~-~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~-~~~~~~v~-ea 90 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTK-IVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPA-PFAKDAVF-EA 90 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCC-EEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHHHHH-HH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCe-EEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCH-HHHHHHHH-HH
Confidence 35778898 99999999999988987 3333222211111135543 48999988 89999999995 33444442 23
Q ss_pred HhcCCCCcEEEEcCCC-chhcHHHHHhhhhhhhheeeh
Q psy3240 119 LESMKPGAILINTSRG-QLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 119 l~~mk~gailINv~RG-~iVde~aL~~~L~~~~i~~~D 155 (274)
++. +... +|..+.| ...+++.|.+..++.|+.++.
T Consensus 91 ~~~-Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi~viG 126 (294)
T 2yv1_A 91 IDA-GIEL-IVVITEHIPVHDTMEFVNYAEDVGVKIIG 126 (294)
T ss_dssp HHT-TCSE-EEECCSCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred HHC-CCCE-EEEECCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 332 2222 4444444 234667888888888886663
No 326
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.52 E-value=0.0041 Score=53.34 Aligned_cols=95 Identities=16% Similarity=0.183 Sum_probs=59.5
Q ss_pred CCCCEEEEEc-cChHHHHHHHHHccCC-CeEEEEeCCCCChh-HhhcCCc--------ccCHHHHhcccCEEEEcCCCCc
Q psy3240 40 LQNSTVGIVG-CGRIGLSVLEKLIPYK-VSKFLYTSRSKKPE-ADKRGAE--------HTNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 40 L~gktVGIIG-lG~IG~~iA~~L~~~G-~~vv~~~~r~~~~~-a~~~g~~--------~~sl~ell~~aDvVil~lPlt~ 108 (274)
...|+|.|.| .|.||+.+++.|...| .++++.+++..+.. ....++. ..+++++++.+|+|+.+.....
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 4468999999 6999999999999999 77777665543221 1111211 1145678899999998876432
Q ss_pred ccHHhccHHHHhcCCC--CcEEEEcCCCch
Q psy3240 109 DTHHLINRARLESMKP--GAILINTSRGQL 136 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~--gailINv~RG~i 136 (274)
.. ......++.|++ ...||++|+...
T Consensus 101 ~~--~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 101 LD--IQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp HH--HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred hh--HHHHHHHHHHHHcCCCEEEEEeccee
Confidence 21 112234444432 247888887554
No 327
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.52 E-value=0.0023 Score=51.15 Aligned_cols=101 Identities=15% Similarity=0.155 Sum_probs=69.7
Q ss_pred CEEEEEcc----ChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc-ccCHHHHhcccCEEEEcCCCCcccHHhccHH
Q psy3240 43 STVGIVGC----GRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE-HTNIDDLCKQSDFIIITSALTPDTHHLINRA 117 (274)
Q Consensus 43 ktVGIIGl----G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~-~~sl~ell~~aDvVil~lPlt~~T~~li~~~ 117 (274)
++|+|||. +..|..+.+.|+..|++++-++++... -.|.. +.++.++-. .|++++++|. +.+..++.+
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~----i~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v~e- 77 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGE----VLGKTIINERPVIEG-VDTVTLYINP-QNQLSEYNY- 77 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSE----ETTEECBCSCCCCTT-CCEEEECSCH-HHHGGGHHH-
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCc----CCCeeccCChHHCCC-CCEEEEEeCH-HHHHHHHHH-
Confidence 68999998 579999999999989876666654332 13443 337777777 9999999994 445555543
Q ss_pred HHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeeh
Q psy3240 118 RLESMKPGAILINTSRGQLVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 118 ~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D 155 (274)
.. .+...+++++.|. .++++.+..++.|+..+.
T Consensus 78 ~~-~~g~k~v~~~~G~----~~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 78 IL-SLKPKRVIFNPGT----ENEELEEILSENGIEPVI 110 (122)
T ss_dssp HH-HHCCSEEEECTTC----CCHHHHHHHHHTTCEEEE
T ss_pred HH-hcCCCEEEECCCC----ChHHHHHHHHHcCCeEEC
Confidence 22 2344467765543 457788888888887663
No 328
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.50 E-value=0.022 Score=52.52 Aligned_cols=101 Identities=16% Similarity=0.237 Sum_probs=73.8
Q ss_pred CCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh--H----h----hcCCc---ccCHHHHhcccCEEEEcC
Q psy3240 39 ALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE--A----D----KRGAE---HTNIDDLCKQSDFIIITS 104 (274)
Q Consensus 39 ~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a----~----~~g~~---~~sl~ell~~aDvVil~l 104 (274)
.+.|.+|+++|= +++..+++..+..+|+++.+..+..-.+. . . +.|.. ..+++|+++.+|+|..-.
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 589999999995 89999999999999998777766543221 1 1 44543 248999999999999944
Q ss_pred CC-------Ccc-----cHHhccHHHHhcCCCCcEEEEcC---CCchhcH
Q psy3240 105 AL-------TPD-----THHLINRARLESMKPGAILINTS---RGQLVDQ 139 (274)
Q Consensus 105 Pl-------t~~-----T~~li~~~~l~~mk~gailINv~---RG~iVde 139 (274)
=. .++ ...-++.+.++.+||+++|.-+. ||.=|+.
T Consensus 232 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~~ 281 (315)
T 1pvv_A 232 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTD 281 (315)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCH
T ss_pred eeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccCH
Confidence 31 111 12346899999999999999986 4554443
No 329
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.49 E-value=0.002 Score=56.35 Aligned_cols=66 Identities=23% Similarity=0.264 Sum_probs=46.2
Q ss_pred CCEEEEEccChHHHHHHHHH--ccCCCeEEEEeCCCCC-hh-H-hhcCCcc---cCHHHHhcc--cCEEEEcCCCC
Q psy3240 42 NSTVGIVGCGRIGLSVLEKL--IPYKVSKFLYTSRSKK-PE-A-DKRGAEH---TNIDDLCKQ--SDFIIITSALT 107 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L--~~~G~~vv~~~~r~~~-~~-a-~~~g~~~---~sl~ell~~--aDvVil~lPlt 107 (274)
.++|+|+|+|++|+.+++.+ ...|++.+++.+..+. .. . .-.|+.. .++++++++ .|++++++|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 46899999999999999984 4567877765544443 32 2 2235543 267788764 89999999964
No 330
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.48 E-value=0.0023 Score=59.30 Aligned_cols=88 Identities=23% Similarity=0.276 Sum_probs=62.2
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc------CHHHHhc--------ccCEEEEcC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT------NIDDLCK--------QSDFIIITS 104 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~------sl~ell~--------~aDvVil~l 104 (274)
.|++|.|+|.|.+|...++.++.+|+ ++++.+.+..+.+ +++.|+..+ ++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 58999999999999999999999999 4555544433333 566777532 4444443 389999987
Q ss_pred CCCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 105 ALTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 105 Plt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
...+. -...++.++++..++.++.
T Consensus 262 G~~~~-----~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 262 GVAET-----VKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CCHHH-----HHHHHHHEEEEEEEEECSC
T ss_pred CCHHH-----HHHHHHHhccCCEEEEEec
Confidence 63221 2356677899999999874
No 331
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.48 E-value=0.011 Score=54.07 Aligned_cols=110 Identities=11% Similarity=0.076 Sum_probs=71.0
Q ss_pred CCEEEEEccChHHHH-HHHHHccCCCeEEEEeCCCCChh---HhhcCCccc---CHHHHh-cccCEEEEcCCCCcccHH-
Q psy3240 42 NSTVGIVGCGRIGLS-VLEKLIPYKVSKFLYTSRSKKPE---ADKRGAEHT---NIDDLC-KQSDFIIITSALTPDTHH- 112 (274)
Q Consensus 42 gktVGIIGlG~IG~~-iA~~L~~~G~~vv~~~~r~~~~~---a~~~g~~~~---sl~ell-~~aDvVil~lPlt~~T~~- 112 (274)
.++|.|||+|.+|.+ +|+.|+..|+++.++|.+...+. ..+.|+... +.+++. ..+|+|+..--..+...-
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 478999999999996 99999999998888887654322 345677543 455555 579999985322222211
Q ss_pred ---------hcc-HHHHhc-C-CCCc-EEEEcCCCchhcHHHHHhhhhhhhh
Q psy3240 113 ---------LIN-RARLES-M-KPGA-ILINTSRGQLVDQEALIDFIADIRV 151 (274)
Q Consensus 113 ---------li~-~~~l~~-m-k~ga-ilINv~RG~iVde~aL~~~L~~~~i 151 (274)
++. .+++.. + +... +-|--+.|+.--..-+...|+..|.
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~ 135 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGL 135 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 222 233443 3 3323 3344456887777777777887664
No 332
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.48 E-value=0.006 Score=55.58 Aligned_cols=95 Identities=20% Similarity=0.192 Sum_probs=61.8
Q ss_pred CEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hh---h----c--CC--ccc-CHHHHhcccCEEEEcCCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--AD---K----R--GA--EHT-NIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~---~----~--g~--~~~-sl~ell~~aDvVil~lPl 106 (274)
++|+|||.|.+|.++|..|...|. +++.+|.+..+.+ +. . . .. ... + .+.++.||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 489999999999999999987666 6677775543321 10 0 1 11 112 5 7889999999999864
Q ss_pred Cc---ccHH-hc--cH-------HHHhcCCCCcEEEEcCCCchhcHH
Q psy3240 107 TP---DTHH-LI--NR-------ARLESMKPGAILINTSRGQLVDQE 140 (274)
Q Consensus 107 t~---~T~~-li--~~-------~~l~~mk~gailINv~RG~iVde~ 140 (274)
.. .++. ++ |. +.+....|++++++++ .++|.-
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~ 124 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVM 124 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHH
Confidence 32 1221 12 11 2345567999999998 566654
No 333
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.47 E-value=0.0058 Score=55.78 Aligned_cols=89 Identities=15% Similarity=0.072 Sum_probs=63.2
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc-------cCHHHHhc-----ccCEEEEcCCC
Q psy3240 41 QNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH-------TNIDDLCK-----QSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~-------~sl~ell~-----~aDvVil~lPl 106 (274)
.|++|.|+|. |.||..+++.++..|+++++.+++..+.+ +.+.|... .++.+.+. ..|+|+.++..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 5899999999 89999999999999997777765544433 45556532 13444433 47999998763
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
.+. -...++.|+++..+|+++..
T Consensus 249 ~~~-----~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 249 EAA-----IEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp HHH-----HHHHTTSEEEEEEEEECCCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEeCC
Confidence 221 24567788999999998753
No 334
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.47 E-value=0.0027 Score=52.96 Aligned_cols=88 Identities=16% Similarity=0.245 Sum_probs=57.2
Q ss_pred CCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHH-H---h--cccCEEEEcCCC
Q psy3240 41 QNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDD-L---C--KQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~e-l---l--~~aDvVil~lPl 106 (274)
.|++|.|+| .|.||+.+++.++..|+++++.+++..+.+ +.+.|.... +..+ + . ...|+|+.++.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g- 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA- 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC-
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc-
Confidence 588999999 699999999999999997776665433322 334454211 2212 1 1 13788887663
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
.. .-...++.|+++..+|+++..
T Consensus 117 -~~----~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 117 -GE----AIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp -TH----HHHHHHHTEEEEEEEEECSCG
T ss_pred -hH----HHHHHHHHhccCCEEEEEcCC
Confidence 11 124566778888888888753
No 335
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.46 E-value=0.009 Score=55.16 Aligned_cols=93 Identities=17% Similarity=0.330 Sum_probs=59.2
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh--H---hh------cCCc--c-cCHHHHhcccCEEEEcC
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE--A---DK------RGAE--H-TNIDDLCKQSDFIIITS 104 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~--a---~~------~g~~--~-~sl~ell~~aDvVil~l 104 (274)
.+.++|+|||.|.+|..+|..|...|. +++.+|....+.+ + .. .... . .+. +.++.||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 356799999999999999999987776 7778876654332 1 11 1222 1 244 7899999999997
Q ss_pred CCCcc---cHH-hc--cH-------HHHhcCCCCcEEEEcCC
Q psy3240 105 ALTPD---THH-LI--NR-------ARLESMKPGAILINTSR 133 (274)
Q Consensus 105 Plt~~---T~~-li--~~-------~~l~~mk~gailINv~R 133 (274)
+.... ++. ++ |. +.+....|++++++++-
T Consensus 84 g~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 84 GVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp SCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 53211 111 11 11 12333358999999983
No 336
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.45 E-value=0.0026 Score=61.51 Aligned_cols=116 Identities=15% Similarity=0.192 Sum_probs=70.8
Q ss_pred CCCEEEEEccChH--HHHHHHHHcc----CCCeEEEEeCCCCChh-Hh--h--c-----CCcc-cCHHHHhcccCEEEEc
Q psy3240 41 QNSTVGIVGCGRI--GLSVLEKLIP----YKVSKFLYTSRSKKPE-AD--K--R-----GAEH-TNIDDLCKQSDFIIIT 103 (274)
Q Consensus 41 ~gktVGIIGlG~I--G~~iA~~L~~----~G~~vv~~~~r~~~~~-a~--~--~-----g~~~-~sl~ell~~aDvVil~ 103 (274)
+.++|+|||.|.+ |..+++.+.. .| +++.||......+ .. . . .+.. .+++++++.||+|+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4579999999998 5788877653 35 6777776543321 11 0 0 1122 3889999999999999
Q ss_pred CCCC-----------cccHHh----------------------cc--HHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhh
Q psy3240 104 SALT-----------PDTHHL----------------------IN--RARLESMKPGAILINTSRGQLVDQEALIDFIAD 148 (274)
Q Consensus 104 lPlt-----------~~T~~l----------------------i~--~~~l~~mk~gailINv~RG~iVde~aL~~~L~~ 148 (274)
++.. |.-.++ +. .+.+....|++++||++----+-..++.+.+..
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~~p~ 162 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPG 162 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHCTT
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHHCCC
Confidence 9642 211222 10 123334468999999986555555666654432
Q ss_pred -hhheeehhh
Q psy3240 149 -IRVISISMV 157 (274)
Q Consensus 149 -~~i~~~D~~ 157 (274)
+=++.+|+.
T Consensus 163 ~rviG~C~~~ 172 (450)
T 3fef_A 163 IKAIGCCHEV 172 (450)
T ss_dssp CEEEECCSHH
T ss_pred CCEEEeCCcH
Confidence 334555543
No 337
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.43 E-value=0.007 Score=55.98 Aligned_cols=105 Identities=14% Similarity=0.193 Sum_probs=62.6
Q ss_pred CEEEEEc-cChHHHH-HH----HHHccCCCeE-----------EEEeCCCCChh--HhhcCCc--ccCHHHHhcc--cCE
Q psy3240 43 STVGIVG-CGRIGLS-VL----EKLIPYKVSK-----------FLYTSRSKKPE--ADKRGAE--HTNIDDLCKQ--SDF 99 (274)
Q Consensus 43 ktVGIIG-lG~IG~~-iA----~~L~~~G~~v-----------v~~~~r~~~~~--a~~~g~~--~~sl~ell~~--aDv 99 (274)
.+||||| +|.||+. .+ +.++..+.-. .+++++..+.. +...++. +.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 4799999 9999998 66 6665444211 14444433333 4566774 3589999975 899
Q ss_pred EEEcCCCCcccHHhccHHHHhcCCCCc-EEEEcC-CCchhcHHHHHhhhhhhhhe
Q psy3240 100 IIITSALTPDTHHLINRARLESMKPGA-ILINTS-RGQLVDQEALIDFIADIRVI 152 (274)
Q Consensus 100 Vil~lPlt~~T~~li~~~~l~~mk~ga-ilINv~-RG~iVde~aL~~~L~~~~i~ 152 (274)
|++++|........ ...+ +.|. +++.-- --.+-+.++|++..++.|+.
T Consensus 87 V~i~tp~~~h~~~~--~~al---~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~ 136 (383)
T 3oqb_A 87 FFDAATTQARPGLL--TQAI---NAGKHVYCEKPIATNFEEALEVVKLANSKGVK 136 (383)
T ss_dssp EEECSCSSSSHHHH--HHHH---TTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred EEECCCchHHHHHH--HHHH---HCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCe
Confidence 99999974433222 2333 4443 444321 22334566777766666653
No 338
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.42 E-value=0.0014 Score=61.98 Aligned_cols=107 Identities=18% Similarity=0.192 Sum_probs=64.1
Q ss_pred CEEEEEccChHHHHHHHHHccCC---CeEEEEeCCCCChh--Hhhc------CCc--------ccCHHHHhcc--cCEEE
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYK---VSKFLYTSRSKKPE--ADKR------GAE--------HTNIDDLCKQ--SDFII 101 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G---~~vv~~~~r~~~~~--a~~~------g~~--------~~sl~ell~~--aDvVi 101 (274)
++|+|+|.|.||+.+|+.|...| ..+++++++..+.. +... .+. ..++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999998877 35666665443322 1111 121 1246677877 89999
Q ss_pred EcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhc--------HHHHHhhhhhhhheee
Q psy3240 102 ITSALTPDTHHLINRARLESMKPGAILINTSRGQLVD--------QEALIDFIADIRVISI 154 (274)
Q Consensus 102 l~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVd--------e~aL~~~L~~~~i~~~ 154 (274)
.++|... ...++ ...+ +.|.-++|++.-...+ ..++.+..++.|+.++
T Consensus 82 n~ag~~~-~~~v~-~a~l---~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i 137 (405)
T 4ina_A 82 NIALPYQ-DLTIM-EACL---RTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMAL 137 (405)
T ss_dssp ECSCGGG-HHHHH-HHHH---HHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEE
T ss_pred ECCCccc-ChHHH-HHHH---HhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEE
Confidence 9988532 12222 2222 4566677775432221 1356666666666543
No 339
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.41 E-value=0.011 Score=52.80 Aligned_cols=70 Identities=16% Similarity=0.254 Sum_probs=48.1
Q ss_pred CCCCCCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh--Hhh----cCCcc--c------CHHHHhcccCEEE
Q psy3240 37 GPALQNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADK----RGAEH--T------NIDDLCKQSDFII 101 (274)
Q Consensus 37 g~~L~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~----~g~~~--~------sl~ell~~aDvVi 101 (274)
+.++.|+++.|+| .|.||+++++.|...|+++++.+++..+.. +.. .++.. . +++++++++|+|+
T Consensus 114 ~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlV 193 (287)
T 1lu9_A 114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF 193 (287)
T ss_dssp TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEE
Confidence 4568999999999 999999999999999997666655432222 111 12111 1 2456677788888
Q ss_pred EcCCC
Q psy3240 102 ITSAL 106 (274)
Q Consensus 102 l~lPl 106 (274)
.+.+.
T Consensus 194 n~ag~ 198 (287)
T 1lu9_A 194 TAGAI 198 (287)
T ss_dssp ECCCT
T ss_pred ECCCc
Confidence 88874
No 340
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.40 E-value=0.0045 Score=56.93 Aligned_cols=98 Identities=21% Similarity=0.279 Sum_probs=61.1
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCC--CChh--Hhh---------cCC--cccCHHHHhcccCEEEEcC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRS--KKPE--ADK---------RGA--EHTNIDDLCKQSDFIIITS 104 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~--~~~~--a~~---------~g~--~~~sl~ell~~aDvVil~l 104 (274)
..++|+|||.|.||..+|..+...|. +++.+|... .+.. +.+ ... ...+-.+.++.||+|+++.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 56899999999999999999988887 777777652 1111 100 111 1122356789999999997
Q ss_pred CCC--c-ccH-Hhc--c----H---HHHhcCCCCcEEEEcCCCchhcHH
Q psy3240 105 ALT--P-DTH-HLI--N----R---ARLESMKPGAILINTSRGQLVDQE 140 (274)
Q Consensus 105 Plt--~-~T~-~li--~----~---~~l~~mk~gailINv~RG~iVde~ 140 (274)
... | .++ .++ | + +.+....|++++++++ .++|.-
T Consensus 87 g~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs--NPvd~~ 133 (315)
T 3tl2_A 87 GIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT--NPVDAM 133 (315)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC--ChHHHH
Confidence 432 1 122 122 1 1 1233346899999998 444443
No 341
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.38 E-value=0.0044 Score=60.01 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=71.6
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCC--------Chh-H------hh-------------cCCccc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSK--------KPE-A------DK-------------RGAEHT 88 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~--------~~~-a------~~-------------~g~~~~ 88 (274)
|.+|+|+||.|-|+|++|+.+|+.|...|++++...+... ..+ . +. .+++..
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v 313 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYF 313 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEE
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEe
Confidence 6789999999999999999999999999997764444321 000 0 00 123333
Q ss_pred CHHHHh-cccCEEEEcCCCCcccHHhccHHHHhcCC--CCcEEEEcCCCchhcHHHHHhhhhhhhheee
Q psy3240 89 NIDDLC-KQSDFIIITSALTPDTHHLINRARLESMK--PGAILINTSRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 89 sl~ell-~~aDvVil~lPlt~~T~~li~~~~l~~mk--~gailINv~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
+.++++ ..||+.+-|.- .+.|+.+..+++. +=.+++-.+-+.+-.+ | .+.|.++||.++
T Consensus 314 ~~~~i~~~~~DI~iPcA~-----~~~I~~~na~~l~~~~ak~V~EgAN~p~T~e-A-~~iL~~rGI~~~ 375 (456)
T 3r3j_A 314 ENQKPWNIPCDIAFPCAT-----QNEINENDADLFIQNKCKMIVEGANMPTHIK-A-LHKLKQNNIILC 375 (456)
T ss_dssp CSCCGGGSCCSEEEECSC-----TTCBCHHHHHHHHHHTCCEEECCSSSCBCTT-H-HHHHHTTTCEEE
T ss_pred CCccccccCccEEEeCCC-----ccchhhHHHHHHHhcCCeEEEecCCCCCCHH-H-HHHHHHCCCEEe
Confidence 444444 36999888654 3557766666652 2357777777775433 2 356777777544
No 342
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=96.38 E-value=0.019 Score=52.77 Aligned_cols=102 Identities=18% Similarity=0.173 Sum_probs=72.9
Q ss_pred CCC-CCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh--H----h----hcCCcc---cCHHHHhcccCEEEEc
Q psy3240 39 ALQ-NSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--A----D----KRGAEH---TNIDDLCKQSDFIIIT 103 (274)
Q Consensus 39 ~L~-gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a----~----~~g~~~---~sl~ell~~aDvVil~ 103 (274)
.+. |++|++|| .+++..+.+..+..+|+++.+..+..-.+. . . ..|... .+++|+++.+|+|..-
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~ 221 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITD 221 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEec
Confidence 588 99999999 578999999999999997777766543221 1 1 334432 4899999999999886
Q ss_pred CC--CCc--c--------cHHhccHHHHhcCCCCcEEEEcC---CCchhcHH
Q psy3240 104 SA--LTP--D--------THHLINRARLESMKPGAILINTS---RGQLVDQE 140 (274)
Q Consensus 104 lP--lt~--~--------T~~li~~~~l~~mk~gailINv~---RG~iVde~ 140 (274)
.= ... + ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 222 ~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~e 273 (307)
T 3tpf_A 222 TWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEE 273 (307)
T ss_dssp CSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred CcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 51 111 1 12336889999999999999986 66545443
No 343
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.37 E-value=0.0031 Score=57.71 Aligned_cols=88 Identities=22% Similarity=0.234 Sum_probs=61.5
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc------CHHHHhc------ccCEEEEcCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT------NIDDLCK------QSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~------sl~ell~------~aDvVil~lPl 106 (274)
.|.+|.|+|.|.||...++.++..|+ ++++.+....+.+ +++.|+..+ ++.+.+. ..|+|+-++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 58999999999999999999999999 5666554443334 666776432 3333221 48999988764
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~R 133 (274)
.+. -...++.++++..++.++-
T Consensus 246 ~~~-----~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 246 VHT-----FAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TTH-----HHHHHHHEEEEEEEEECCC
T ss_pred hHH-----HHHHHHHHhcCCEEEEecc
Confidence 322 2356677888988888874
No 344
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.35 E-value=0.0044 Score=57.13 Aligned_cols=87 Identities=17% Similarity=0.171 Sum_probs=62.4
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHh----c--ccCEEEEcCCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLC----K--QSDFIIITSALT 107 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell----~--~aDvVil~lPlt 107 (274)
.|++|.|+|.|.+|...++.++.+|+++++.+.+..+.+ +++.|+..+ ++.+.+ . ..|+|+-++. .
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-~ 267 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG-G 267 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-h
Confidence 589999999999999999999999997777765544444 566676431 232222 1 5899999887 2
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+. -...++.++++..++.++.
T Consensus 268 ~~-----~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 268 AG-----LGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp SC-----HHHHHHHEEEEEEEEEECC
T ss_pred HH-----HHHHHHHhhcCCEEEEEec
Confidence 22 2356677888988888874
No 345
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.35 E-value=0.0041 Score=56.82 Aligned_cols=88 Identities=15% Similarity=0.173 Sum_probs=62.0
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-----CHHHHh----c--ccCEEEEcCCC
Q psy3240 40 LQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-----NIDDLC----K--QSDFIIITSAL 106 (274)
Q Consensus 40 L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-----sl~ell----~--~aDvVil~lPl 106 (274)
-.|++|.|+|. |.||..+++.++.+|+++++.+.+..+.+ +.+.|+..+ ++.+.+ . ..|+|+.++..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~ 237 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG 237 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCch
Confidence 35899999998 99999999999999998777776555544 556666432 232222 1 48999998864
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+ .-...++.++++..++.++.
T Consensus 238 -~-----~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 238 -P-----AFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp -------CHHHHHHTEEEEEEEEEC--
T ss_pred -h-----HHHHHHHhhcCCCEEEEEEc
Confidence 2 12467778899999998874
No 346
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.33 E-value=0.0094 Score=54.54 Aligned_cols=97 Identities=15% Similarity=0.250 Sum_probs=60.0
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hh---h------cCCcc-cCHHHHhcccCEEEEcCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--AD---K------RGAEH-TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~---~------~g~~~-~sl~ell~~aDvVil~lPl 106 (274)
..++|+|||.|.+|.++|..|...|. +++.+|....+.. +. . ..... .+..+.++.||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 44799999999999999999876563 5667765432111 11 1 11111 1456779999999999975
Q ss_pred Ccc---cH--------Hhcc--HHHHhcCCCCcEEEEcCCCchhcH
Q psy3240 107 TPD---TH--------HLIN--RARLESMKPGAILINTSRGQLVDQ 139 (274)
Q Consensus 107 t~~---T~--------~li~--~~~l~~mk~gailINv~RG~iVde 139 (274)
... ++ .++. .+.+....|++++|+++ .++|.
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~ 128 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT--NPVDI 128 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec--CcHHH
Confidence 422 11 1121 12333447899999975 45544
No 347
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.32 E-value=0.02 Score=53.02 Aligned_cols=100 Identities=15% Similarity=0.205 Sum_probs=72.2
Q ss_pred CCCCCEEEEEccC--hHHHHHHHHHccCCCeEEEEeCCCCChh----------HhhcCCc---ccCHHHHhcccCEEEEc
Q psy3240 39 ALQNSTVGIVGCG--RIGLSVLEKLIPYKVSKFLYTSRSKKPE----------ADKRGAE---HTNIDDLCKQSDFIIIT 103 (274)
Q Consensus 39 ~L~gktVGIIGlG--~IG~~iA~~L~~~G~~vv~~~~r~~~~~----------a~~~g~~---~~sl~ell~~aDvVil~ 103 (274)
.+.|.+|+++|=| ++..+++..+..+|+++.+..+..-.+. +.+.|.. ..+++|+++.+|+|..-
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~ 243 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTD 243 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEec
Confidence 5899999999985 9999999999999997777665432211 1144543 24899999999999984
Q ss_pred CCC-------Ccc-----cHHhccHHHHhcC-CCCcEEEEcC---CCchhc
Q psy3240 104 SAL-------TPD-----THHLINRARLESM-KPGAILINTS---RGQLVD 138 (274)
Q Consensus 104 lPl-------t~~-----T~~li~~~~l~~m-k~gailINv~---RG~iVd 138 (274)
.=. .++ ...-++.+.++.+ ||+++|.-+. ||.=|+
T Consensus 244 ~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~ 294 (325)
T 1vlv_A 244 VWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVT 294 (325)
T ss_dssp CCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBC
T ss_pred cccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCCCCCcccC
Confidence 331 111 1234688999999 9999999986 455343
No 348
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.32 E-value=0.019 Score=53.31 Aligned_cols=85 Identities=18% Similarity=0.163 Sum_probs=52.8
Q ss_pred CEEEEEc-cChHHHHHHHHHccCC-CeEEEEeCCCCChh-Hh-----hc---CCcccCHHHHhcccCEEEEcCCCCcccH
Q psy3240 43 STVGIVG-CGRIGLSVLEKLIPYK-VSKFLYTSRSKKPE-AD-----KR---GAEHTNIDDLCKQSDFIIITSALTPDTH 111 (274)
Q Consensus 43 ktVGIIG-lG~IG~~iA~~L~~~G-~~vv~~~~r~~~~~-a~-----~~---g~~~~sl~ell~~aDvVil~lPlt~~T~ 111 (274)
.+|+|+| .|.||+.+++.|.... ++++...++..... .. -. .....++++ +..+|+|+.|+|.... +
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s-~ 82 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVF-A 82 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHH-H
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHH-H
Confidence 5899999 7999999999997654 35455444332211 11 01 112224444 5789999999996432 2
Q ss_pred HhccHHHHhcCCCCcEEEEcCC
Q psy3240 112 HLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~R 133 (274)
... ... ++.|+.+|+.|.
T Consensus 83 ~~a-~~~---~~aG~~VId~Sa 100 (345)
T 2ozp_A 83 REF-DRY---SALAPVLVDLSA 100 (345)
T ss_dssp HTH-HHH---HTTCSEEEECSS
T ss_pred HHH-HHH---HHCCCEEEEcCc
Confidence 222 122 366888999875
No 349
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.31 E-value=0.0031 Score=58.15 Aligned_cols=88 Identities=17% Similarity=0.132 Sum_probs=62.1
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCe-EEEEeCCCCChh-HhhcCCccc------CHHHHhc-----ccCEEEEcCCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVS-KFLYTSRSKKPE-ADKRGAEHT------NIDDLCK-----QSDFIIITSALT 107 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~-vv~~~~r~~~~~-a~~~g~~~~------sl~ell~-----~aDvVil~lPlt 107 (274)
.|++|.|+|.|.+|...++.++.+|++ +++.+.+..+.+ +++.|+..+ ++.+.+. ..|+|+-++...
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~ 269 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 269 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCH
Confidence 589999999999999999999999994 566655444434 566676421 3333332 379999988632
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+. -...++.++++..++.++-
T Consensus 270 ~~-----~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 270 EI-----LKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp HH-----HHHHHHTEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHhcCCEEEEeCC
Confidence 11 2456788899999998875
No 350
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.28 E-value=0.0048 Score=56.69 Aligned_cols=95 Identities=16% Similarity=0.203 Sum_probs=58.1
Q ss_pred CEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hhh--c------CCcc-cCHHHHhcccCEEEEcCCCCcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--ADK--R------GAEH-TNIDDLCKQSDFIIITSALTPD 109 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~~--~------g~~~-~sl~ell~~aDvVil~lPlt~~ 109 (274)
++|+|||.|.+|.+++..|...+. +.+.+|....+.. +.. . .... .+..+.++.||+|+++.+....
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~~ 85 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQK 85 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 689999999999999999876554 5667775432222 111 1 1111 2456779999999999875322
Q ss_pred c-----------HHhcc--HHHHhcCCCCcEEEEcCCCchhcH
Q psy3240 110 T-----------HHLIN--RARLESMKPGAILINTSRGQLVDQ 139 (274)
Q Consensus 110 T-----------~~li~--~~~l~~mk~gailINv~RG~iVde 139 (274)
- ..++. .+.+....|++++++++ .++|.
T Consensus 86 ~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~ 126 (318)
T 1ez4_A 86 PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA--NPVDI 126 (318)
T ss_dssp -------CHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC--CcHHH
Confidence 1 11221 12333447899999983 45544
No 351
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.28 E-value=0.0038 Score=58.45 Aligned_cols=109 Identities=15% Similarity=0.088 Sum_probs=66.0
Q ss_pred CCCEEEEEccCh---HHHHHHHHHccCC-CeEEE-EeCCCCC-hh--HhhcCCc---c-cCHHHHhcc-------cCEEE
Q psy3240 41 QNSTVGIVGCGR---IGLSVLEKLIPYK-VSKFL-YTSRSKK-PE--ADKRGAE---H-TNIDDLCKQ-------SDFII 101 (274)
Q Consensus 41 ~gktVGIIGlG~---IG~~iA~~L~~~G-~~vv~-~~~r~~~-~~--a~~~g~~---~-~sl~ell~~-------aDvVi 101 (274)
+-.+|||||+|. ||+..+..++..+ ++++. +.++... .. +.+.|+. . .+++++++. .|+|+
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~ 90 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVS 90 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEE
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEE
Confidence 346899999999 9999998887654 55554 4444332 22 4566773 2 489999975 89999
Q ss_pred EcCCCCcccHHhccHHHHhcCCCCcEEEEc-CCCchhcHHHHHhhhhhhhhee
Q psy3240 102 ITSALTPDTHHLINRARLESMKPGAILINT-SRGQLVDQEALIDFIADIRVIS 153 (274)
Q Consensus 102 l~lPlt~~T~~li~~~~l~~mk~gailINv-~RG~iVde~aL~~~L~~~~i~~ 153 (274)
+++|...... +-...++.=| .+++.- -.-.+-+.++|++..++.|+.+
T Consensus 91 i~tp~~~H~~--~~~~al~aGk--hVl~EKPla~~~~ea~~l~~~a~~~g~~~ 139 (398)
T 3dty_A 91 IATPNGTHYS--ITKAALEAGL--HVVCEKPLCFTVEQAENLRELSHKHNRIV 139 (398)
T ss_dssp EESCGGGHHH--HHHHHHHTTC--EEEECSCSCSCHHHHHHHHHHHHHTTCCE
T ss_pred ECCCcHHHHH--HHHHHHHCCC--eEEEeCCCcCCHHHHHHHHHHHHHcCCeE
Confidence 9999643322 2223333211 233331 1223345666666666666543
No 352
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.27 E-value=0.019 Score=52.16 Aligned_cols=109 Identities=12% Similarity=0.177 Sum_probs=67.4
Q ss_pred CCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcc-cCHHHHhc--c-cCEEEEcCCCCcccHHhccH
Q psy3240 42 NSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEH-TNIDDLCK--Q-SDFIIITSALTPDTHHLINR 116 (274)
Q Consensus 42 gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~-~sl~ell~--~-aDvVil~lPlt~~T~~li~~ 116 (274)
..++.|+|. |++|+.+++.++..|++.+...+ +.+....-.|+.. .+++|+.. . .|++++++|. +.+...+.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~Vn-P~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~-~~~~~~v~- 89 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTKVVAGVT-PGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPA-PFAPDAVY- 89 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCG-GGHHHHHH-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeC-CCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCH-HHHHHHHH-
Confidence 345777798 99999999999988986332223 2211111135543 48999887 5 9999999995 44444443
Q ss_pred HHHhcCCCCcEEEEcCCCc-hhcHHHHHhhhhhhhheeeh
Q psy3240 117 ARLESMKPGAILINTSRGQ-LVDQEALIDFIADIRVISIS 155 (274)
Q Consensus 117 ~~l~~mk~gailINv~RG~-iVde~aL~~~L~~~~i~~~D 155 (274)
+..+. .... +|..+.|= ..+++.|.+..++.++.++.
T Consensus 90 ea~~~-Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi~viG 127 (297)
T 2yv2_A 90 EAVDA-GIRL-VVVITEGIPVHDTMRFVNYARQKGATIIG 127 (297)
T ss_dssp HHHHT-TCSE-EEECCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHC-CCCE-EEEECCCCCHHHHHHHHHHHHHcCCEEEc
Confidence 23332 2222 44444442 23567888888888886663
No 353
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.27 E-value=0.0058 Score=58.76 Aligned_cols=70 Identities=11% Similarity=0.004 Sum_probs=49.6
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-H--hhcCCccc--CH-HHHhcccCEEEEcCCCCc
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-A--DKRGAEHT--NI-DDLCKQSDFIIITSALTP 108 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a--~~~g~~~~--sl-~ell~~aDvVil~lPlt~ 108 (274)
-+++|++|.|||.|.+|.+.++.|...|++++++++...... . .+.++... .+ ++.+..+|+|+.+. ..+
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at-~~~ 83 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT-DDD 83 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC-SCH
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcC-CCH
Confidence 478999999999999999999999999998888887543322 1 11234332 22 33466899888854 444
No 354
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.23 E-value=0.0035 Score=57.18 Aligned_cols=88 Identities=13% Similarity=0.107 Sum_probs=62.0
Q ss_pred CCCEEEEEccChHHHHHHHHHccC--CCeEEEEeCCCCChh-HhhcCCccc-CHHH------Hhc---ccCEEEEcCCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPY--KVSKFLYTSRSKKPE-ADKRGAEHT-NIDD------LCK---QSDFIIITSALT 107 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~--G~~vv~~~~r~~~~~-a~~~g~~~~-sl~e------ll~---~aDvVil~lPlt 107 (274)
.|++|.|+|.|.+|...++.++.+ |+++++.+.+..+.+ +++.|+..+ +..+ .+. ..|+|+-++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 789999999999999999999998 997655554433333 566777542 3221 122 579999988642
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~R 133 (274)
.. + ...++.++++..++.++.
T Consensus 250 ~~----~-~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 250 ET----T-YNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp HH----H-HHHHHHEEEEEEEEECCC
T ss_pred HH----H-HHHHHHhhcCCEEEEeCC
Confidence 11 1 355677889989998874
No 355
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.20 E-value=0.015 Score=54.23 Aligned_cols=97 Identities=14% Similarity=0.188 Sum_probs=71.2
Q ss_pred CCCCCCCEEEEEccC--hHHHHHHHHHccCCCeEEEEeCCCCChh--H--------hhcCCc---ccCHHHHhcccCEEE
Q psy3240 37 GPALQNSTVGIVGCG--RIGLSVLEKLIPYKVSKFLYTSRSKKPE--A--------DKRGAE---HTNIDDLCKQSDFII 101 (274)
Q Consensus 37 g~~L~gktVGIIGlG--~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a--------~~~g~~---~~sl~ell~~aDvVi 101 (274)
|..+.|.+|+++|=| +++.+++..+..+|+++.+..+..-.+. . .+.|.. ..+++|+++.+|||.
T Consensus 150 g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvy 229 (335)
T 1dxh_A 150 DKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVH 229 (335)
T ss_dssp SSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEE
T ss_pred CCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEE
Confidence 436899999999985 9999999999999998777766443221 1 144543 248999999999999
Q ss_pred EcCCCC--c-----c------cHHhccHHHHhcC-CCCcEEEEcCC
Q psy3240 102 ITSALT--P-----D------THHLINRARLESM-KPGAILINTSR 133 (274)
Q Consensus 102 l~lPlt--~-----~------T~~li~~~~l~~m-k~gailINv~R 133 (274)
.-+=.. . . ...-++.+.++.+ ||+++|.-+.=
T Consensus 230 td~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (335)
T 1dxh_A 230 TDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLP 275 (335)
T ss_dssp ECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSC
T ss_pred eCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCCC
Confidence 844311 0 1 1134689999999 99999999864
No 356
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=96.20 E-value=0.011 Score=57.66 Aligned_cols=107 Identities=16% Similarity=0.289 Sum_probs=70.7
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCC--------Chh----H-hhcC-------CcccCHHHHh-ccc
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSK--------KPE----A-DKRG-------AEHTNIDDLC-KQS 97 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~--------~~~----a-~~~g-------~~~~sl~ell-~~a 97 (274)
+|+|+||.|-|+|++|+..|+.|...|++++...+... ... . ...| .+..+ ++++ ..|
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~-~~il~~~~ 319 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE-GSILEVDC 319 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEEC-SCGGGSCC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeec-cccccccc
Confidence 68999999999999999999999999998877554322 111 0 1111 11111 1333 469
Q ss_pred CEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheee
Q psy3240 98 DFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 98 DvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
||.+-|.- .+.|+.+..++++ -.+++-.+-+. ...+| .+.|.++||.++
T Consensus 320 DIliPcA~-----~n~I~~~na~~l~-akiV~EgAN~p-~T~eA-~~iL~~rGIl~~ 368 (501)
T 3mw9_A 320 DILIPAAS-----EKQLTKSNAPRVK-AKIIAEGANGP-TTPEA-DKIFLERNIMVI 368 (501)
T ss_dssp SEEEECSS-----SCCBCTTTGGGCC-CSEEECCSSSC-BCHHH-HHHHHHTTCEEE
T ss_pred eEEeeccc-----cCccCHhHHHHcC-ceEEEeCCCCc-CCHHH-HHHHHHCCCEEE
Confidence 99887654 3557777777775 45777777776 44444 456778887544
No 357
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.19 E-value=0.014 Score=54.09 Aligned_cols=65 Identities=23% Similarity=0.316 Sum_probs=43.8
Q ss_pred CEEEEEccChHHHHHHHHHcc-CCCeEEEEeCCCCChh---Hhhc------------------CCcc-cCHHHHhcccCE
Q psy3240 43 STVGIVGCGRIGLSVLEKLIP-YKVSKFLYTSRSKKPE---ADKR------------------GAEH-TNIDDLCKQSDF 99 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~-~G~~vv~~~~r~~~~~---a~~~------------------g~~~-~sl~ell~~aDv 99 (274)
.+|||+|+|.||+.+++.|.. -+++++...++..... +... +... .+.++++..+|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 379999999999999999875 4676655554432211 1111 1111 156677788999
Q ss_pred EEEcCCCC
Q psy3240 100 IIITSALT 107 (274)
Q Consensus 100 Vil~lPlt 107 (274)
|+.|+|..
T Consensus 82 V~~atp~~ 89 (337)
T 1cf2_P 82 VIDCTPEG 89 (337)
T ss_dssp EEECCSTT
T ss_pred EEECCCch
Confidence 99999964
No 358
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=96.19 E-value=0.0077 Score=55.22 Aligned_cols=86 Identities=21% Similarity=0.310 Sum_probs=54.1
Q ss_pred CEEEEEccChHHHHHHHHHcc--CCCeEEEEeCCCCCh--h--HhhcCCcc--cCHHHHhc-----ccCEEEEcCCCCcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIP--YKVSKFLYTSRSKKP--E--ADKRGAEH--TNIDDLCK-----QSDFIIITSALTPD 109 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~--~G~~vv~~~~r~~~~--~--a~~~g~~~--~sl~ell~-----~aDvVil~lPlt~~ 109 (274)
.+|||||+|.||+.+++.+.. -+++.+...++.... . +...|... .+.+++++ ..|+|+.++|. ..
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~-~~ 83 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSA-SA 83 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCH-HH
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCCh-HH
Confidence 589999999999999999943 466555555544332 2 45667642 35677754 58999999993 22
Q ss_pred cHHhccHHHHhcCCCCcEEEEc
Q psy3240 110 THHLINRARLESMKPGAILINT 131 (274)
Q Consensus 110 T~~li~~~~l~~mk~gailINv 131 (274)
...+ -...++. ++|..+++.
T Consensus 84 h~~~-a~~al~a-~~Gk~Vi~e 103 (312)
T 1nvm_B 84 HVQN-EALLRQA-KPGIRLIDL 103 (312)
T ss_dssp HHHH-HHHHHHH-CTTCEEEEC
T ss_pred HHHH-HHHHHHh-CCCCEEEEc
Confidence 2222 1223322 337777773
No 359
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.18 E-value=0.0087 Score=54.45 Aligned_cols=88 Identities=18% Similarity=0.178 Sum_probs=63.7
Q ss_pred CCCCEEEEEccC-hHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHh------cccCEEEEcCC
Q psy3240 40 LQNSTVGIVGCG-RIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLC------KQSDFIIITSA 105 (274)
Q Consensus 40 L~gktVGIIGlG-~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell------~~aDvVil~lP 105 (274)
-.|++|.|+|.| .||..+++.++..|+++++.+.+..+.+ +.+.|+... ++.+.+ ...|+|+.++.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g 222 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIG 222 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCC
Confidence 358999999997 9999999999999998777776665555 666676421 333322 25899999876
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
. +.+ .+.+..++++..++.++-
T Consensus 223 ~-~~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 223 G-PDG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp H-HHH-----HHHHHTEEEEEEEEECCC
T ss_pred C-hhH-----HHHHHHhcCCCEEEEEee
Confidence 3 221 234577899999999874
No 360
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.17 E-value=0.0037 Score=52.81 Aligned_cols=90 Identities=13% Similarity=0.247 Sum_probs=57.1
Q ss_pred CEEEEEc-cChHHHHHHHHHc-cCCCeEEEEeCCCC-Chh-H--hhcCCc-----c---cCHHHHhcccCEEEEcCCCCc
Q psy3240 43 STVGIVG-CGRIGLSVLEKLI-PYKVSKFLYTSRSK-KPE-A--DKRGAE-----H---TNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 43 ktVGIIG-lG~IG~~iA~~L~-~~G~~vv~~~~r~~-~~~-a--~~~g~~-----~---~sl~ell~~aDvVil~lPlt~ 108 (274)
|+|.|.| .|.||+.+++.|. ..|+++++.+++.. +.. . ...++. . .+++++++.+|+|+.+.....
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n 85 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG 85 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence 6799999 5999999999999 89998777765533 211 1 111221 1 145667889999999886431
Q ss_pred ccHHhccHHHHhcCCC-C-cEEEEcCCCch
Q psy3240 109 DTHHLINRARLESMKP-G-AILINTSRGQL 136 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~-g-ailINv~RG~i 136 (274)
.. ....++.|++ + ..||++|+...
T Consensus 86 -~~---~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 86 -SD---MASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp -HH---HHHHHHHHHHTTCCEEEEEEETTT
T ss_pred -hh---HHHHHHHHHhcCCCeEEEEeecee
Confidence 11 3334444432 2 36888776543
No 361
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.16 E-value=0.0018 Score=60.18 Aligned_cols=96 Identities=13% Similarity=0.231 Sum_probs=59.8
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hh--hcC--------Ccc-cCHHHHhcccCEEEEcCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--AD--KRG--------AEH-TNIDDLCKQSDFIIITSA 105 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~--~~g--------~~~-~sl~ell~~aDvVil~lP 105 (274)
..++|+|||.|.||..+|..+...|. +++.+|....+.. +. ..+ +.. .+.++ ++.||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999987665 6677776433222 11 111 111 25555 899999999865
Q ss_pred CCc---ccH--------HhccH--HHHhcCCCCcEEEEcCCCchhcH
Q psy3240 106 LTP---DTH--------HLINR--ARLESMKPGAILINTSRGQLVDQ 139 (274)
Q Consensus 106 lt~---~T~--------~li~~--~~l~~mk~gailINv~RG~iVde 139 (274)
... .+| .++.. +.+....|++++++++ .++|.
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt--NPvdi 143 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP--ELGTD 143 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHHH
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC--CccHH
Confidence 321 111 11210 2333447999999998 44443
No 362
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.16 E-value=0.013 Score=52.75 Aligned_cols=112 Identities=14% Similarity=0.229 Sum_probs=77.6
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCccc-CHHHHhcccCEEEEcCCCCc----------
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHT-NIDDLCKQSDFIIITSALTP---------- 108 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~-sl~ell~~aDvVil~lPlt~---------- 108 (274)
++|++|.++|........++.|...|.++... ..+.. .....|+... ++.+.++++|+|+...|...
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~-~~~~~-~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a 82 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLV-GFDQL-DHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFS 82 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEE-SCTTS-SCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEE-ecccc-ccccccceeccchHHHHhcCCEEEeccccccCCcccccccc
Confidence 67889999999999999999999999965443 22111 1112233332 46777889999998555321
Q ss_pred ccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhc
Q psy3240 109 DTHHLINRARLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVT 158 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~ 158 (274)
.+...++++.++.++++.+++ ++ +|..++.++++++|+....+-+
T Consensus 83 ~~~~~~~~~~l~~~~~l~~i~-~g----~~~~d~~~~~~~~gi~v~~~~~ 127 (300)
T 2rir_A 83 NEEVVLKQDHLDRTPAHCVIF-SG----ISNAYLENIAAQAKRKLVKLFE 127 (300)
T ss_dssp SSCEECCHHHHHTSCTTCEEE-ES----SCCHHHHHHHHHTTCCEEEGGG
T ss_pred cCCccchHHHHhhcCCCCEEE-Ee----cCCHHHHHHHHHCCCEEEeecC
Confidence 122336788899999998887 43 3667777778888988877554
No 363
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.16 E-value=0.01 Score=49.92 Aligned_cols=65 Identities=14% Similarity=0.258 Sum_probs=45.0
Q ss_pred CEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCc-----c---cCHHHHhcccCEEEEcCCCC
Q psy3240 43 STVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAE-----H---TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 43 ktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~-----~---~sl~ell~~aDvVil~lPlt 107 (274)
++|.|.| .|.||+.+++.|...|.++++.+++..+......++. . .++.++++.+|+|+.+....
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 7899999 5999999999999999977776654332211101111 1 24667888999999887654
No 364
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.15 E-value=0.0051 Score=56.47 Aligned_cols=87 Identities=16% Similarity=0.205 Sum_probs=62.9
Q ss_pred CCCEEEEE-ccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHhc-----ccCEEEEcCCCC
Q psy3240 41 QNSTVGIV-GCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLCK-----QSDFIIITSALT 107 (274)
Q Consensus 41 ~gktVGII-GlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell~-----~aDvVil~lPlt 107 (274)
.|++|.|+ |.|.||..+++.++..|+++++.+.+..+.+ +.+.|+... ++.+.+. ..|+|+.++..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 245 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA- 245 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH-
Confidence 68999999 6899999999999999998777765544444 555666421 3333332 48999998864
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+ .-...++.++++..++.++.
T Consensus 246 ~-----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 246 A-----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp G-----GHHHHHHTEEEEEEEEECCC
T ss_pred H-----HHHHHHHHhccCCEEEEEEe
Confidence 2 22456788899999999874
No 365
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=96.15 E-value=0.022 Score=53.11 Aligned_cols=102 Identities=14% Similarity=0.209 Sum_probs=71.7
Q ss_pred CCCCCCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh--H--------hhcCCc--c-cCHHHHhcccCEEEE
Q psy3240 37 GPALQNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--A--------DKRGAE--H-TNIDDLCKQSDFIII 102 (274)
Q Consensus 37 g~~L~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a--------~~~g~~--~-~sl~ell~~aDvVil 102 (274)
|..+.|++|++|| .+++..+++..+..+|+++.+..+..-.+. . ...|.. . .+++ +++.+|+|..
T Consensus 170 G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvyt 248 (339)
T 4a8t_A 170 GKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYT 248 (339)
T ss_dssp TCCGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEE
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEe
Confidence 4369999999999 589999999999999998777766543221 1 223543 2 3888 9999999997
Q ss_pred cC--CC--Cccc----------HHhccHHHHhcCCCCcEEEEcC---CCchhcH
Q psy3240 103 TS--AL--TPDT----------HHLINRARLESMKPGAILINTS---RGQLVDQ 139 (274)
Q Consensus 103 ~l--Pl--t~~T----------~~li~~~~l~~mk~gailINv~---RG~iVde 139 (274)
-+ .. .++. ..-++.+.++.+||+++|.-+. ||.=|+.
T Consensus 249 d~w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcLPa~Rg~EIt~ 302 (339)
T 4a8t_A 249 DVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTD 302 (339)
T ss_dssp CCSSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCH
T ss_pred cCcccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCH
Confidence 33 11 1111 1346888999999999999986 5654443
No 366
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.14 E-value=0.019 Score=52.40 Aligned_cols=97 Identities=19% Similarity=0.235 Sum_probs=60.0
Q ss_pred CEEEEEcc-ChHHHHHHHHHccCC--CeEEEEeCCCCChhHhh--cC-----Ccc----cCHHHHhcccCEEEEcCCCCc
Q psy3240 43 STVGIVGC-GRIGLSVLEKLIPYK--VSKFLYTSRSKKPEADK--RG-----AEH----TNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 43 ktVGIIGl-G~IG~~iA~~L~~~G--~~vv~~~~r~~~~~a~~--~g-----~~~----~sl~ell~~aDvVil~lPlt~ 108 (274)
++|+|+|. |.+|..++..|...| .+++.+|.......+.+ .. +.. .++++.++.||+|+++.....
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 48999998 999999999998766 45677776541111211 11 111 257778999999999975432
Q ss_pred c---cH--------Hhcc--HHHHhcCCCCcEEEEcCCCchhcHHH
Q psy3240 109 D---TH--------HLIN--RARLESMKPGAILINTSRGQLVDQEA 141 (274)
Q Consensus 109 ~---T~--------~li~--~~~l~~mk~gailINv~RG~iVde~a 141 (274)
. ++ .++. .+.+....|++++|++ ..++|.-.
T Consensus 81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--sNPv~~~~ 124 (314)
T 1mld_A 81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII--SNPVNSTI 124 (314)
T ss_dssp CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC--SSCHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE--CCCcchhH
Confidence 1 11 1111 0122333588999997 45666543
No 367
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.14 E-value=0.0087 Score=54.90 Aligned_cols=88 Identities=15% Similarity=0.189 Sum_probs=62.5
Q ss_pred CCCEEEEEccChHHHHH-HHHH-ccCCCe-EEEEeCCCC---Chh-HhhcCCccc-----CHHHHhc----ccCEEEEcC
Q psy3240 41 QNSTVGIVGCGRIGLSV-LEKL-IPYKVS-KFLYTSRSK---KPE-ADKRGAEHT-----NIDDLCK----QSDFIIITS 104 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~i-A~~L-~~~G~~-vv~~~~r~~---~~~-a~~~g~~~~-----sl~ell~----~aDvVil~l 104 (274)
.+++|.|+|.|.+|... ++.+ +.+|++ +++.+++.. +.+ +++.|+..+ ++.+ +. ..|+|+-++
T Consensus 172 ~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~gg~Dvvid~~ 250 (357)
T 2b5w_A 172 DPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED-VPDVYEQMDFIYEAT 250 (357)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSCCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHH-HHHhCCCCCEEEECC
Confidence 34899999999999999 9999 999997 666666554 444 667776432 3333 22 479999988
Q ss_pred CCCcccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 105 ALTPDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 105 Plt~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
..... -...++.++++..++.++..
T Consensus 251 g~~~~-----~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 251 GFPKH-----AIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp CCHHH-----HHHHHHHEEEEEEEEECCCC
T ss_pred CChHH-----HHHHHHHHhcCCEEEEEeCC
Confidence 64211 13566778899899988753
No 368
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=96.13 E-value=0.018 Score=55.60 Aligned_cols=111 Identities=14% Similarity=0.208 Sum_probs=65.7
Q ss_pred CCCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCC-------CC--h---h----Hh------------hcCCccc
Q psy3240 37 GPALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRS-------KK--P---E----AD------------KRGAEHT 88 (274)
Q Consensus 37 g~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~-------~~--~---~----a~------------~~g~~~~ 88 (274)
|.+++|++|.|.|+|++|+.+|+.|...|++++...+.. .- + . .+ ..+++..
T Consensus 225 G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i 304 (449)
T 1bgv_A 225 NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFF 304 (449)
T ss_dssp TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEE
T ss_pred cCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEe
Confidence 578999999999999999999999999999877644321 00 0 0 00 0122222
Q ss_pred CHHHHh-cccCEEEEcCCCCcccHHhccHHHHhcCC-CC-cEEEEcCCCchhcHHHHHhhhhhh-hheee
Q psy3240 89 NIDDLC-KQSDFIIITSALTPDTHHLINRARLESMK-PG-AILINTSRGQLVDQEALIDFIADI-RVISI 154 (274)
Q Consensus 89 sl~ell-~~aDvVil~lPlt~~T~~li~~~~l~~mk-~g-ailINv~RG~iVde~aL~~~L~~~-~i~~~ 154 (274)
+.++++ ..||+++-|.. .+.|+.+..+.++ .| .+++--+-+.+ ..+|- +.|.++ |+.++
T Consensus 305 ~~~e~~~~~~Dil~P~A~-----~~~I~~~na~~l~a~g~kiV~EgAN~p~-T~eA~-~~l~~~~Gi~~~ 367 (449)
T 1bgv_A 305 PGEKPWGQKVDIIMPCAT-----QNDVDLEQAKKIVANNVKYYIEVANMPT-TNEAL-RFLMQQPNMVVA 367 (449)
T ss_dssp ETCCGGGSCCSEEECCSC-----TTCBCHHHHHHHHHTTCCEEECCSSSCB-CHHHH-HHHHHCTTCEEE
T ss_pred CchhhhcCCcceeecccc-----ccccchhhHHHHHhcCCeEEEeCCCCcC-CHHHH-HHHHHcCCEEEE
Confidence 222233 36888776653 2445555555554 23 25555555554 44443 557777 66544
No 369
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.13 E-value=0.0058 Score=56.34 Aligned_cols=97 Identities=15% Similarity=0.170 Sum_probs=58.8
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hh--hcC------Ccc-cCHHHHhcccCEEEEcCCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--AD--KRG------AEH-TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~--~~g------~~~-~sl~ell~~aDvVil~lPlt 107 (274)
..++|+|||.|.+|.+++..|...+. +.+.+|....+.. +. ... +.. .+..+.++.||+|+++.+..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 34799999999999999999875553 5667776432222 11 111 111 24567799999999998753
Q ss_pred ccc---H--------Hhcc--HHHHhcCCCCcEEEEcCCCchhcH
Q psy3240 108 PDT---H--------HLIN--RARLESMKPGAILINTSRGQLVDQ 139 (274)
Q Consensus 108 ~~T---~--------~li~--~~~l~~mk~gailINv~RG~iVde 139 (274)
..- + .++. .+.+....|+++++++ ..++|.
T Consensus 88 ~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~ 130 (326)
T 2zqz_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA--ANPVDI 130 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC--SSSHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe--CCcHHH
Confidence 221 1 1111 0123333689999998 345544
No 370
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.12 E-value=0.0092 Score=55.43 Aligned_cols=86 Identities=14% Similarity=0.143 Sum_probs=52.0
Q ss_pred CEEEEEc-cChHHHHHHHHHccCC-CeEEEEe-CCCCC-hh-HhhcC-------------Ccc--cCHHHHhc-ccCEEE
Q psy3240 43 STVGIVG-CGRIGLSVLEKLIPYK-VSKFLYT-SRSKK-PE-ADKRG-------------AEH--TNIDDLCK-QSDFII 101 (274)
Q Consensus 43 ktVGIIG-lG~IG~~iA~~L~~~G-~~vv~~~-~r~~~-~~-a~~~g-------------~~~--~sl~ell~-~aDvVi 101 (274)
.+|+|+| .|.||+.+++.|.... ++++... ++... .. ....+ ... .+++++++ .+|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 5899999 8999999999997654 4444443 32221 11 11111 111 24555556 899999
Q ss_pred EcCCCCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 102 ITSALTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 102 l~lPlt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+|+|... +.... ... ++.|+.+|+.+.
T Consensus 89 ~atp~~~-~~~~a-~~~---~~aG~~VId~s~ 115 (354)
T 1ys4_A 89 SALPSDL-AKKFE-PEF---AKEGKLIFSNAS 115 (354)
T ss_dssp ECCCHHH-HHHHH-HHH---HHTTCEEEECCS
T ss_pred ECCCchH-HHHHH-HHH---HHCCCEEEECCc
Confidence 9998532 22222 122 246888999875
No 371
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.11 E-value=0.0045 Score=56.11 Aligned_cols=90 Identities=14% Similarity=0.034 Sum_probs=64.2
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-H-hhcCCccc------CHHHHhc-----ccCEEEEcCC
Q psy3240 40 LQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-A-DKRGAEHT------NIDDLCK-----QSDFIIITSA 105 (274)
Q Consensus 40 L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a-~~~g~~~~------sl~ell~-----~aDvVil~lP 105 (274)
-.|++|.|+|. |.||..+++.++..|+++++.+++..+.+ + ++.|+... ++.+.+. ..|+|+.++.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 227 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVG 227 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCC
Confidence 35899999998 99999999999999997777665544433 4 56666421 3333332 4899998775
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCCCc
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~RG~ 135 (274)
. + .-...++.++++..++.++...
T Consensus 228 ~-~-----~~~~~~~~l~~~G~iv~~G~~~ 251 (336)
T 4b7c_A 228 G-E-----ILDTVLTRIAFKARIVLCGAIS 251 (336)
T ss_dssp H-H-----HHHHHHTTEEEEEEEEECCCGG
T ss_pred c-c-----hHHHHHHHHhhCCEEEEEeecc
Confidence 2 1 2346778899999999987644
No 372
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.09 E-value=0.021 Score=53.41 Aligned_cols=87 Identities=15% Similarity=0.209 Sum_probs=56.6
Q ss_pred CCCEEEEEc-cChHHHHHHHHHccCCC-eEEEEeCCCCC-hhHh------hcCCcc--cCHHHHhcccCEEEEcCCCCcc
Q psy3240 41 QNSTVGIVG-CGRIGLSVLEKLIPYKV-SKFLYTSRSKK-PEAD------KRGAEH--TNIDDLCKQSDFIIITSALTPD 109 (274)
Q Consensus 41 ~gktVGIIG-lG~IG~~iA~~L~~~G~-~vv~~~~r~~~-~~a~------~~g~~~--~sl~ell~~aDvVil~lPlt~~ 109 (274)
.-.+||||| .|..|+.+.+.|...-. +.....++... .... ...... .+.++++.++|+|++|+|..
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~-- 89 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAG-- 89 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTT--
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcH--
Confidence 345899998 69999999999986543 33333333221 1111 112222 25566668899999999953
Q ss_pred cHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 110 THHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 110 T~~li~~~~l~~mk~gailINv~RG 134 (274)
...+..+.+ .|+.+||.|..
T Consensus 90 ----~s~~~~~~~-~g~~VIDlSsd 109 (351)
T 1vkn_A 90 ----ASYDLVREL-KGVKIIDLGAD 109 (351)
T ss_dssp ----HHHHHHTTC-CSCEEEESSST
T ss_pred ----HHHHHHHHh-CCCEEEECChh
Confidence 234566666 89999999853
No 373
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.09 E-value=0.0083 Score=55.25 Aligned_cols=94 Identities=20% Similarity=0.300 Sum_probs=68.7
Q ss_pred CCCCCEEEEEcc---ChHHHHHHHHHccCCCeEEEEeCCCCChh------HhhcCCcc---cCHHHHhcccCEEEEcCCC
Q psy3240 39 ALQNSTVGIVGC---GRIGLSVLEKLIPYKVSKFLYTSRSKKPE------ADKRGAEH---TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 39 ~L~gktVGIIGl---G~IG~~iA~~L~~~G~~vv~~~~r~~~~~------a~~~g~~~---~sl~ell~~aDvVil~lPl 106 (274)
.+.|++|+++|= |++..+++..+..+|+++.+..+..-.+. +.+.|... .+++|+++.+|+|..-.=-
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQ 231 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCC
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 589999999997 58999999999999997777665443221 22335542 4899999999999985532
Q ss_pred Cc------cc-----HHhccHHHHhcCCCCcEEEEcC
Q psy3240 107 TP------DT-----HHLINRARLESMKPGAILINTS 132 (274)
Q Consensus 107 t~------~T-----~~li~~~~l~~mk~gailINv~ 132 (274)
.+ +. ..-++.+.++.+||+++|.-+.
T Consensus 232 ~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 232 KERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp GGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred ccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 11 11 1235778888899999999886
No 374
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.08 E-value=0.025 Score=53.20 Aligned_cols=94 Identities=14% Similarity=0.175 Sum_probs=68.4
Q ss_pred CCCCCEEEEEccC--hHHHHHHHHHccCCCeEEEEeCCCCCh----h--------HhhcCCc--c-cCHHHHhcccCEEE
Q psy3240 39 ALQNSTVGIVGCG--RIGLSVLEKLIPYKVSKFLYTSRSKKP----E--------ADKRGAE--H-TNIDDLCKQSDFII 101 (274)
Q Consensus 39 ~L~gktVGIIGlG--~IG~~iA~~L~~~G~~vv~~~~r~~~~----~--------a~~~g~~--~-~sl~ell~~aDvVi 101 (274)
.+.|++|++||=+ ++..+++..+..+|+++.+..+..-.+ . +.+.|.. . .+++|+++.+|||.
T Consensus 177 ~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVy 256 (365)
T 4amu_A 177 NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIY 256 (365)
T ss_dssp SCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEE
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEE
Confidence 3899999999977 889999999999999877766644322 1 1233543 2 38999999999999
Q ss_pred EcC--CCCccc-----------HHhccHHHHhcCCCCcEEEEcC
Q psy3240 102 ITS--ALTPDT-----------HHLINRARLESMKPGAILINTS 132 (274)
Q Consensus 102 l~l--Plt~~T-----------~~li~~~~l~~mk~gailINv~ 132 (274)
.-+ ...++. ..-++.+.++.+||+++|.-+.
T Consensus 257 td~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 257 TDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp ECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECS
T ss_pred ecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 832 112111 1236889999999999999886
No 375
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.06 E-value=0.0043 Score=56.05 Aligned_cols=87 Identities=14% Similarity=0.139 Sum_probs=65.4
Q ss_pred CCCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------C-HHHHhcccCEEEEcCCCCccc
Q psy3240 40 LQNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------N-IDDLCKQSDFIIITSALTPDT 110 (274)
Q Consensus 40 L~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------s-l~ell~~aDvVil~lPlt~~T 110 (274)
-.|.+|.|+| .|.+|...++.++.+|+++++..+ ..+.+ +++.|+..+ + +.+.+...|+|+-++.. +
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~-~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~-~-- 226 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG-D-- 226 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC-HHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCH-H--
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec-cchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCc-H--
Confidence 3689999997 999999999999999997666653 33333 666777531 3 66666789999998863 1
Q ss_pred HHhccHHHHhcCCCCcEEEEcCC
Q psy3240 111 HHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 111 ~~li~~~~l~~mk~gailINv~R 133 (274)
.. ...++.++++..++.++.
T Consensus 227 --~~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 227 --VG-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp --HH-HHHGGGEEEEEEEEECCS
T ss_pred --HH-HHHHHhccCCCEEEEeCC
Confidence 12 567888999999999864
No 376
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.05 E-value=0.013 Score=56.22 Aligned_cols=95 Identities=18% Similarity=0.259 Sum_probs=65.6
Q ss_pred CCCCCCCEEEEEccC----------hHHHHHHHHHccCCCeEEEEeCCCCChhHhhcC--Cccc-CHHHHhcccCEEEEc
Q psy3240 37 GPALQNSTVGIVGCG----------RIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRG--AEHT-NIDDLCKQSDFIIIT 103 (274)
Q Consensus 37 g~~L~gktVGIIGlG----------~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g--~~~~-sl~ell~~aDvVil~ 103 (274)
+..+.|++|+|+|+- .=...+++.|...|+++.+||+..........+ +..+ ++++.++.+|.|+++
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~ 392 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHV 392 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEEC
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEc
Confidence 357899999999984 347899999999999888888765321122222 4444 788999999999998
Q ss_pred CCCCcccHHhccHHH-HhcCCCCcEEEEcCCCc
Q psy3240 104 SALTPDTHHLINRAR-LESMKPGAILINTSRGQ 135 (274)
Q Consensus 104 lPlt~~T~~li~~~~-l~~mk~gailINv~RG~ 135 (274)
++-. +-+. ++.+. .+.|+ +.+++|+ |+-
T Consensus 393 t~~~-~f~~-~~~~~~~~~~~-~~~i~D~-r~~ 421 (450)
T 3gg2_A 393 TEWK-EFRM-PDWSALSQAMA-ASLVIDG-RNV 421 (450)
T ss_dssp SCCG-GGSS-CCHHHHHHHSS-SCEEEES-SCC
T ss_pred cCCH-HHhh-cCHHHHHHhcC-CCEEEEC-CCC
Confidence 8743 2222 34343 34465 5689996 543
No 377
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.05 E-value=0.013 Score=54.47 Aligned_cols=97 Identities=19% Similarity=0.248 Sum_probs=71.1
Q ss_pred CCCCCCCEEEEEccC--hHHHHHHHHHccCCCeEEEEeCCCCChh----------HhhcCCc---ccCHHHHhcccCEEE
Q psy3240 37 GPALQNSTVGIVGCG--RIGLSVLEKLIPYKVSKFLYTSRSKKPE----------ADKRGAE---HTNIDDLCKQSDFII 101 (274)
Q Consensus 37 g~~L~gktVGIIGlG--~IG~~iA~~L~~~G~~vv~~~~r~~~~~----------a~~~g~~---~~sl~ell~~aDvVi 101 (274)
|..|.|.+|+++|=| +++.+++..+..+|+++.+..+..-.+. +.+.|.. ..+++|+++.+|||.
T Consensus 150 g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvy 229 (333)
T 1duv_G 150 GKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIY 229 (333)
T ss_dssp TCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEE
T ss_pred CCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEE
Confidence 446899999999975 9999999999999998777665432221 1145643 248999999999999
Q ss_pred EcCCCC--c-----c------cHHhccHHHHhcC-CCCcEEEEcCC
Q psy3240 102 ITSALT--P-----D------THHLINRARLESM-KPGAILINTSR 133 (274)
Q Consensus 102 l~lPlt--~-----~------T~~li~~~~l~~m-k~gailINv~R 133 (274)
.-+=.. . . ...-++.+.++.+ ||+++|.-+.=
T Consensus 230 td~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (333)
T 1duv_G 230 TDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLP 275 (333)
T ss_dssp ECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECSC
T ss_pred eCCccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCCC
Confidence 844311 0 0 1134689999999 99999999863
No 378
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.04 E-value=0.0097 Score=57.47 Aligned_cols=107 Identities=15% Similarity=0.212 Sum_probs=64.1
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh---Hhhc-C----------------------Cc-ccCHHHHh
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE---ADKR-G----------------------AE-HTNIDDLC 94 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~---a~~~-g----------------------~~-~~sl~ell 94 (274)
.+|||||+|.||+.+++.+... +++++...++..... +.+. | .. +.++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 5799999999999999988754 676666666655332 2222 3 11 23899999
Q ss_pred c--ccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEE--EcCCCchhcHHHHHhhhhhhhheee
Q psy3240 95 K--QSDFIIITSALTPDTHHLINRARLESMKPGAILI--NTSRGQLVDQEALIDFIADIRVISI 154 (274)
Q Consensus 95 ~--~aDvVil~lPlt~~T~~li~~~~l~~mk~gailI--Nv~RG~iVde~aL~~~L~~~~i~~~ 154 (274)
+ +.|+|+.++|... ...-+ .+..|+.|.-++ |.+ -.....+.|.+.-++.|+.+.
T Consensus 104 ~d~dIDaVviaTp~p~-~H~e~---a~~AL~AGKHVv~~nk~-l~~~eg~eL~~~A~e~Gvvl~ 162 (446)
T 3upl_A 104 SNPLIDVIIDATGIPE-VGAET---GIAAIRNGKHLVMMNVE-ADVTIGPYLKAQADKQGVIYS 162 (446)
T ss_dssp TCTTCCEEEECSCCHH-HHHHH---HHHHHHTTCEEEECCHH-HHHHHHHHHHHHHHHHTCCEE
T ss_pred cCCCCCEEEEcCCChH-HHHHH---HHHHHHcCCcEEecCcc-cCHHHHHHHHHHHHHhCCeee
Confidence 7 4899999998532 11111 223344555555 432 111234566666666666543
No 379
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.00 E-value=0.0045 Score=56.42 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=59.9
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCcc------cCHHHHhc-----ccCEEEEcCCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEH------TNIDDLCK-----QSDFIIITSALT 107 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~------~sl~ell~-----~aDvVil~lPlt 107 (274)
.|++|.|+|.|.+|..+++.++.+|+ ++++.+.+..+.+ +++. +.. .++.+.+. ..|+|+-++...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~ 242 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE 242 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH
Confidence 78999999999999999999999999 7776664433322 3333 321 13333332 579999988642
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+. -...++.|+++..++.++.
T Consensus 243 ~~-----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 243 AA-----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HH-----HHHHHHHEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHhcCCEEEEEec
Confidence 22 1355677888888988875
No 380
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.99 E-value=0.0088 Score=54.62 Aligned_cols=94 Identities=18% Similarity=0.324 Sum_probs=57.2
Q ss_pred EEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh--Hh---h----c--CC--cc-cCHHHHhcccCEEEEcCCCCc
Q psy3240 44 TVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE--AD---K----R--GA--EH-TNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 44 tVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~--a~---~----~--g~--~~-~sl~ell~~aDvVil~lPlt~ 108 (274)
||+|||.|.||..+|..+...|. +++.+|....+.. +. . . .. .. .+. +.++.||+|+++.+...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999998875565 4777776544322 11 1 1 21 12 254 67899999999976532
Q ss_pred c-----------cHHhccH--HHHhcCCCCcEEEEcCCCchhcHH
Q psy3240 109 D-----------THHLINR--ARLESMKPGAILINTSRGQLVDQE 140 (274)
Q Consensus 109 ~-----------T~~li~~--~~l~~mk~gailINv~RG~iVde~ 140 (274)
. +..++.. +.+....|++++|+++ .++|.-
T Consensus 80 k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~~ 122 (308)
T 2d4a_B 80 KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT--NPVDAM 122 (308)
T ss_dssp CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC--CchHHH
Confidence 1 1111110 1233335899999984 355443
No 381
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.99 E-value=0.012 Score=56.78 Aligned_cols=108 Identities=16% Similarity=0.203 Sum_probs=62.9
Q ss_pred CCEEEEEccChHHHHHHHHHcc----------CCCeEEEEeCCCCChh-HhhcCCc-ccCHHHHhc--ccCEEEEcCCCC
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIP----------YKVSKFLYTSRSKKPE-ADKRGAE-HTNIDDLCK--QSDFIIITSALT 107 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~----------~G~~vv~~~~r~~~~~-a~~~g~~-~~sl~ell~--~aDvVil~lPlt 107 (274)
-.+|||||+|.||+.+++.++. .+.+++...++..... ....+.. +.++++++. +.|+|+.++|..
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp~~ 89 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIGGL 89 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCCSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCCCc
Confidence 4589999999999999987752 4565666655544322 1112333 348999986 479999999963
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCCCchh-cHHHHHhhhhhhhhee
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSRGQLV-DQEALIDFIADIRVIS 153 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~RG~iV-de~aL~~~L~~~~i~~ 153 (274)
..-..++ .+.|+.|.-++-.--.-.. ..+.|.+..+++|+.+
T Consensus 90 ~~h~~~~----~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l 132 (444)
T 3mtj_A 90 EPARELV----MQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMV 132 (444)
T ss_dssp TTHHHHH----HHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred hHHHHHH----HHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeE
Confidence 2222222 2223445444433222112 3356666666666655
No 382
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.99 E-value=0.011 Score=53.53 Aligned_cols=88 Identities=14% Similarity=0.031 Sum_probs=60.8
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc-------cCHHHHhc-----ccCEEEEcCC
Q psy3240 40 LQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH-------TNIDDLCK-----QSDFIIITSA 105 (274)
Q Consensus 40 L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~-------~sl~ell~-----~aDvVil~lP 105 (274)
-.|++|.|.|. |.||..+++.++..|+++++.+.+..+.+ +.+.|... .++.+.+. ..|+|+.++.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 223 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 223 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 35899999998 99999999999999997776665433333 44455431 12333332 4799988775
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
. + . -...++.++++..++.++.
T Consensus 224 ~-~----~-~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 224 G-E----F-LNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp H-H----H-HHHHHTTEEEEEEEEECCC
T ss_pred h-H----H-HHHHHHHHhcCCEEEEEec
Confidence 3 1 1 2466788899999998874
No 383
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.98 E-value=0.0092 Score=55.36 Aligned_cols=88 Identities=18% Similarity=0.239 Sum_probs=61.3
Q ss_pred CCCEEEEEccChHHHHHHHHHccCC-CeEEEEeCCCCChh-HhhcCCccc---C---HH---HHh------cccCEEEEc
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYK-VSKFLYTSRSKKPE-ADKRGAEHT---N---ID---DLC------KQSDFIIIT 103 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G-~~vv~~~~r~~~~~-a~~~g~~~~---s---l~---ell------~~aDvVil~ 103 (274)
.|++|.|+|.|.+|...++.++.+| .++++.+.+..+.+ +++.|+..+ + -+ +.+ ...|+|+-+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~ 274 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 274 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEEC
Confidence 4889999999999999999999999 57777765544444 566776432 1 11 111 147999998
Q ss_pred CCCCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 104 SALTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 104 lPlt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+...+.. ...++.++++..++.++.
T Consensus 275 ~g~~~~~-----~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 275 TGDSRAL-----LEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp SSCTTHH-----HHHHHHEEEEEEEEECCC
T ss_pred CCCHHHH-----HHHHHHHhcCCEEEEEec
Confidence 8643221 345677888888888875
No 384
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=95.97 E-value=0.016 Score=53.48 Aligned_cols=105 Identities=16% Similarity=0.271 Sum_probs=72.8
Q ss_pred CCCCCEEEEEcc---ChHHHHHHHHHccC-CCeEEEEeCCCCChh------HhhcCCcc---cCHHHHhcccCEEEEcCC
Q psy3240 39 ALQNSTVGIVGC---GRIGLSVLEKLIPY-KVSKFLYTSRSKKPE------ADKRGAEH---TNIDDLCKQSDFIIITSA 105 (274)
Q Consensus 39 ~L~gktVGIIGl---G~IG~~iA~~L~~~-G~~vv~~~~r~~~~~------a~~~g~~~---~sl~ell~~aDvVil~lP 105 (274)
.+.|++|+++|= |++..+++..+..+ |+++.+..+..-.+. +.+.|... .+++|+++.+|+|..-.=
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 589999999997 59999999999999 998777665443221 22335542 389999999999998643
Q ss_pred CCc----cc------HHhccHHHHhcCCCCcEEEEcC-CCchhcHHHHHh
Q psy3240 106 LTP----DT------HHLINRARLESMKPGAILINTS-RGQLVDQEALID 144 (274)
Q Consensus 106 lt~----~T------~~li~~~~l~~mk~gailINv~-RG~iVde~aL~~ 144 (274)
-.+ +. ..-++.+.++.+||+++|.-+. ||.=| .+++.+
T Consensus 231 q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lPrg~EI-~~eV~d 279 (310)
T 3csu_A 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEI-ATDVDK 279 (310)
T ss_dssp ----------------CCBCGGGGTTCCTTCEEECCSCCSSSB-CHHHHT
T ss_pred cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCCCCCee-cHHHhC
Confidence 111 11 2345788899999999999986 54433 334444
No 385
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.97 E-value=0.0068 Score=54.95 Aligned_cols=88 Identities=18% Similarity=0.155 Sum_probs=62.8
Q ss_pred CCCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHh------cccCEEEEcCC
Q psy3240 40 LQNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLC------KQSDFIIITSA 105 (274)
Q Consensus 40 L~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell------~~aDvVil~lP 105 (274)
-.|++|.|+| .|.||..+++.++..|+++++.+++..+.+ +++.|+... ++.+.+ ...|+|+.++.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g 226 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVG 226 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCC
Confidence 3689999999 899999999999999998777766444444 566666421 333322 24799998876
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
. + .-...++.++++..++.++.
T Consensus 227 ~-~-----~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 227 K-D-----TFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp G-G-----GHHHHHHHEEEEEEEEECCC
T ss_pred h-H-----HHHHHHHHhccCCEEEEEcC
Confidence 3 1 12456777899999999875
No 386
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=95.97 E-value=0.017 Score=54.64 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=63.0
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CH------------------------HH
Q psy3240 40 LQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NI------------------------DD 92 (274)
Q Consensus 40 L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl------------------------~e 92 (274)
-.|++|.|+|. |.||..+++.++..|+++++.+.+..+.+ +++.|+..+ +. ++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence 36899999998 99999999999999998777765443333 566776432 11 11
Q ss_pred H---h-cccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 93 L---C-KQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 93 l---l-~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+ . ...|+|+-++.. + . -...+..++++..+|+++.
T Consensus 299 v~~~~g~g~Dvvid~~G~-~----~-~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTGR-V----T-FGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHSSCCSEEEECSCH-H----H-HHHHHHHSCTTCEEEESCC
T ss_pred HHHHhCCCceEEEECCCc-h----H-HHHHHHHHhcCCEEEEEec
Confidence 1 1 248999998763 1 1 2456778999999999975
No 387
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=95.96 E-value=0.013 Score=53.97 Aligned_cols=109 Identities=11% Similarity=0.174 Sum_probs=61.8
Q ss_pred CEEEEEccChHHHHHHHHHccC--------CCeEEEEeCCCCChh-H--------h---hcCCc--cc---CHHHHh-cc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY--------KVSKFLYTSRSKKPE-A--------D---KRGAE--HT---NIDDLC-KQ 96 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~--------G~~vv~~~~r~~~~~-a--------~---~~g~~--~~---sl~ell-~~ 96 (274)
.+|||||+|.||+.+++.++.. +++++...++..... . . ..++. .. ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 5799999999999999988653 355555555543211 1 0 11221 12 788887 35
Q ss_pred cCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCch-hcHHHHHhhhhhhhhe
Q psy3240 97 SDFIIITSALTPDTHHLINRARLESMKPGAILINTSRGQL-VDQEALIDFIADIRVI 152 (274)
Q Consensus 97 aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~i-Vde~aL~~~L~~~~i~ 152 (274)
.|+|+.++|.. .+-..--+-..+.|+.|.-+|-..-..+ ...+.|.+.-+++|+.
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~ 142 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRR 142 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCE
Confidence 89999999975 1111111122334455666665432222 2345666655555653
No 388
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.95 E-value=0.0055 Score=55.51 Aligned_cols=38 Identities=26% Similarity=0.435 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCC
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRS 75 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~ 75 (274)
-+|+|++|.|||.|.+|...++.|...|++++++++..
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 57999999999999999999999999999888887654
No 389
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=95.92 E-value=0.027 Score=52.86 Aligned_cols=102 Identities=13% Similarity=0.178 Sum_probs=71.5
Q ss_pred CCCCCCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh--H--------hhcCCc--c-cCHHHHhcccCEEEE
Q psy3240 37 GPALQNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--A--------DKRGAE--H-TNIDDLCKQSDFIII 102 (274)
Q Consensus 37 g~~L~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a--------~~~g~~--~-~sl~ell~~aDvVil 102 (274)
|..+.|++|++|| .+++..+++..+..+|+++.+..+..-.+. . ...|.. . .+++ +++.+|||..
T Consensus 148 G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVyt 226 (355)
T 4a8p_A 148 GKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYT 226 (355)
T ss_dssp TCCGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEE
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEe
Confidence 4368999999999 589999999999999997777766543321 1 223543 2 3888 9999999997
Q ss_pred cC----CCCccc----------HHhccHHHHhcCCCCcEEEEcC---CCchhcH
Q psy3240 103 TS----ALTPDT----------HHLINRARLESMKPGAILINTS---RGQLVDQ 139 (274)
Q Consensus 103 ~l----Plt~~T----------~~li~~~~l~~mk~gailINv~---RG~iVde 139 (274)
-+ ....+. ..-++.+.++.+|++++|.-+. ||.=|+.
T Consensus 227 d~w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt~ 280 (355)
T 4a8p_A 227 DVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTD 280 (355)
T ss_dssp CCSSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBCH
T ss_pred cccccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeCH
Confidence 33 110110 1346888999999999999886 5654443
No 390
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=95.91 E-value=0.034 Score=52.12 Aligned_cols=95 Identities=13% Similarity=0.152 Sum_probs=66.3
Q ss_pred CCCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCC-h-hH----h------hcCCc--c-cCHHHHhcccCEEE
Q psy3240 38 PALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKK-P-EA----D------KRGAE--H-TNIDDLCKQSDFII 101 (274)
Q Consensus 38 ~~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~-~-~a----~------~~g~~--~-~sl~ell~~aDvVi 101 (274)
..|.|++|++||= -++..+++..+..+|+++.+..+..-. + .. . +.|.. . .+++|+++.+|||.
T Consensus 184 ~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvy 263 (353)
T 3sds_A 184 LGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIV 263 (353)
T ss_dssp CSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEE
Confidence 3479999999995 478899999999999977776665432 1 11 1 11322 2 38999999999998
Q ss_pred EcC--CCCcc--c--------HHhccHHHHhc--CCCCcEEEEcC
Q psy3240 102 ITS--ALTPD--T--------HHLINRARLES--MKPGAILINTS 132 (274)
Q Consensus 102 l~l--Plt~~--T--------~~li~~~~l~~--mk~gailINv~ 132 (274)
.-. +...+ . ...++.+.++. +|++++|.-+.
T Consensus 264 td~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 264 TDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp ECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred eCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 743 22111 1 12478899998 89999999886
No 391
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.90 E-value=0.034 Score=52.72 Aligned_cols=113 Identities=17% Similarity=0.237 Sum_probs=72.7
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh---HhhcCCccc---CHHHHhcccCEEEEcCCCCcccHH
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE---ADKRGAEHT---NIDDLCKQSDFIIITSALTPDTHH 112 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~---a~~~g~~~~---sl~ell~~aDvVil~lPlt~~T~~ 112 (274)
++++|+|.|||+|..|.+.|+.|+..|.+++++|.+...+. .. .|+... ...+.+..+|.|++.-...+....
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~ 80 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASPGIALAHPS 80 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECTTSCTTCHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCCCCCCCCHH
Confidence 46789999999999999999999999998889988765432 22 465542 134566689998886433222111
Q ss_pred ----------hccH-HHH-hcCCCCcEEEEcCCCchhcHHHHHhhhhhhhhe
Q psy3240 113 ----------LINR-ARL-ESMKPGAILINTSRGQLVDQEALIDFIADIRVI 152 (274)
Q Consensus 113 ----------li~~-~~l-~~mk~gailINv~RG~iVde~aL~~~L~~~~i~ 152 (274)
++.. +.+ ..++...+-|--+.|+.-...-+...|++.|..
T Consensus 81 ~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~g~~ 132 (439)
T 2x5o_A 81 LSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVN 132 (439)
T ss_dssp HHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCC
Confidence 1221 112 224444555555568877666666667776543
No 392
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=95.90 E-value=0.032 Score=48.44 Aligned_cols=98 Identities=11% Similarity=0.098 Sum_probs=61.7
Q ss_pred CCCCCCEEEEEcc-Ch--HHHHHHHHHccCCCeEEEEeCCCCChh-Hh----hc---CCc-----cc---CHHHHhc---
Q psy3240 38 PALQNSTVGIVGC-GR--IGLSVLEKLIPYKVSKFLYTSRSKKPE-AD----KR---GAE-----HT---NIDDLCK--- 95 (274)
Q Consensus 38 ~~L~gktVGIIGl-G~--IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~----~~---g~~-----~~---sl~ell~--- 95 (274)
.+++||++.|.|. |. ||+++|+.|...|+++++.+++..... .. .. .+. .. +++++++
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 4689999999997 56 999999999999998777765533222 11 11 111 11 2333443
Q ss_pred ----ccCEEEEcCCCCc----------ccHH--------------hccHHHHhcCCCCcEEEEcCCCc
Q psy3240 96 ----QSDFIIITSALTP----------DTHH--------------LINRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 96 ----~aDvVil~lPlt~----------~T~~--------------li~~~~l~~mk~gailINv~RG~ 135 (274)
..|+++.+..... .+.. .+....++.|+++..+||+++..
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 150 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLG 150 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGG
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccc
Confidence 5699988765432 1111 02234677888888999998743
No 393
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.88 E-value=0.0074 Score=55.63 Aligned_cols=88 Identities=13% Similarity=0.091 Sum_probs=62.4
Q ss_pred CCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHhc-----ccCEEEEcCCCC
Q psy3240 41 QNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLCK-----QSDFIIITSALT 107 (274)
Q Consensus 41 ~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell~-----~aDvVil~lPlt 107 (274)
.|++|.|+| .|.||..+++.++..|+++++.+++..+.+ +.+.|+... ++.+.++ ..|+|+.++..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-
Confidence 589999999 799999999999999997666665433333 555666421 3333332 47999998863
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
. .-...++.|+++..+|.++..
T Consensus 242 -~----~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 242 -A----MFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp -H----HHHHHHHHEEEEEEEEECCCG
T ss_pred -H----HHHHHHHHHhcCCEEEEEeCC
Confidence 1 124567778888899988753
No 394
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.87 E-value=0.028 Score=52.23 Aligned_cols=86 Identities=17% Similarity=0.119 Sum_probs=51.1
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh---Hhhc--------------------CCccc-CHHHHhccc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE---ADKR--------------------GAEHT-NIDDLCKQS 97 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~---a~~~--------------------g~~~~-sl~ell~~a 97 (274)
.+|||+|+|.||+.+++.|... +++++...+...... .... +.... +.++++..+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 4899999999999999998765 576655544322211 1111 11111 345566789
Q ss_pred CEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcC
Q psy3240 98 DFIIITSALTPDTHHLINRARLESMKPGAILINTS 132 (274)
Q Consensus 98 DvVil~lPlt~~T~~li~~~~l~~mk~gailINv~ 132 (274)
|+|+.|+|.... .... + -..++.|+.+|..+
T Consensus 83 DiV~eatg~~~s-~~~a--~-~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 83 DIVVDGAPKKIG-KQNL--E-NIYKPHKVKAILQG 113 (343)
T ss_dssp SEEEECCCTTHH-HHHH--H-HTTTTTTCEEEECT
T ss_pred CEEEECCCcccc-HHHH--H-HHHHHCCCEEEECC
Confidence 999999985321 1111 1 24567777766544
No 395
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.86 E-value=0.026 Score=47.42 Aligned_cols=66 Identities=20% Similarity=0.225 Sum_probs=45.9
Q ss_pred CEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChhH-h-----hcCCcc--cCHHHHhcccCEEEEcCCCCc
Q psy3240 43 STVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPEA-D-----KRGAEH--TNIDDLCKQSDFIIITSALTP 108 (274)
Q Consensus 43 ktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a-~-----~~g~~~--~sl~ell~~aDvVil~lPlt~ 108 (274)
++|.|.| .|.||+.+++.|.+.|.++++.+++..+... . ...+.. .++.++++.+|+|+.+.....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~ 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC
Confidence 4789999 7999999999999999987777765432211 0 111111 135567888999999887654
No 396
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.85 E-value=0.02 Score=51.89 Aligned_cols=89 Identities=24% Similarity=0.293 Sum_probs=61.8
Q ss_pred CCCCEEEEEccChHHHHHHHHHccCCCeEEEE-eCCCCChh-HhhcCCccc------CHHHHh------cccCEEEEcCC
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLY-TSRSKKPE-ADKRGAEHT------NIDDLC------KQSDFIIITSA 105 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~-~~r~~~~~-a~~~g~~~~------sl~ell------~~aDvVil~lP 105 (274)
..|++|.|.|.|.+|...++.++.+|+++++. +.+..+.+ ++++|+..+ +..+.. ...|+|+-++.
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G 238 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAG 238 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECSC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccccccccc
Confidence 46899999999999999999999999876554 44333334 677887532 333332 23688888775
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
.. .+ + ...++.++++..++.++.
T Consensus 239 ~~-~~---~-~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 239 VP-QT---V-ELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp SH-HH---H-HHHHHHCCTTCEEEECCC
T ss_pred cc-ch---h-hhhhheecCCeEEEEEec
Confidence 32 21 2 345677899999988774
No 397
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=95.85 E-value=0.028 Score=51.86 Aligned_cols=91 Identities=18% Similarity=0.221 Sum_probs=63.8
Q ss_pred CCCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHh---cccCEEEEcCCCCc
Q psy3240 40 LQNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLC---KQSDFIIITSALTP 108 (274)
Q Consensus 40 L~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell---~~aDvVil~lPlt~ 108 (274)
-.|++|.|+| .|.||..+++.++..|+++++.+ +..+.+ +++.|+..+ ++.+.+ ...|+|+-++....
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 260 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGST 260 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChh
Confidence 3689999999 79999999999999999776665 334333 666776431 333332 35899999886431
Q ss_pred ccHHhccHHHHhcCCCCcEEEEcCCCc
Q psy3240 109 DTHHLINRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~gailINv~RG~ 135 (274)
.+ -...+..++++..+|.++...
T Consensus 261 ~~----~~~~~~~l~~~G~iv~~g~~~ 283 (375)
T 2vn8_A 261 ET----WAPDFLKKWSGATYVTLVTPF 283 (375)
T ss_dssp HH----HGGGGBCSSSCCEEEESCCSH
T ss_pred hh----hHHHHHhhcCCcEEEEeCCCc
Confidence 11 124567789999999998643
No 398
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.84 E-value=0.0079 Score=54.93 Aligned_cols=88 Identities=19% Similarity=0.253 Sum_probs=59.7
Q ss_pred CCCEEEEE-ccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-----CHHHHhc-----ccCEEEEcCCCCc
Q psy3240 41 QNSTVGIV-GCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-----NIDDLCK-----QSDFIIITSALTP 108 (274)
Q Consensus 41 ~gktVGII-GlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-----sl~ell~-----~aDvVil~lPlt~ 108 (274)
.|++|.|+ |.|.||...++.++..|+++++.+.+..+.+ +++.|+..+ ++.+.+. ..|+|+-++...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~- 228 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTD- 228 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHH-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCch-
Confidence 68999999 7999999999999999997666655443333 556676432 2333322 478888877521
Q ss_pred ccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 109 DTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~gailINv~R 133 (274)
. .-...++.++++..+|.++.
T Consensus 229 ~----~~~~~~~~l~~~G~iv~~~~ 249 (346)
T 3fbg_A 229 M----YYDDMIQLVKPRGHIATIVA 249 (346)
T ss_dssp H----HHHHHHHHEEEEEEEEESSC
T ss_pred H----HHHHHHHHhccCCEEEEECC
Confidence 1 11345667888888888753
No 399
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.82 E-value=0.0072 Score=54.65 Aligned_cols=87 Identities=14% Similarity=0.119 Sum_probs=62.8
Q ss_pred CCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHh------cccCEEEEcCCC
Q psy3240 41 QNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLC------KQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell------~~aDvVil~lPl 106 (274)
.|++|.|+| .|.||..+++.++..|+++++.+++..+.+ +.+.|+... ++.+.+ ...|+|+.++..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 589999999 799999999999999997777765444433 556665421 333322 258999998763
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+ .-...++.++++..++.++.
T Consensus 220 -~-----~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 220 -D-----TWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp -G-----GHHHHHTTEEEEEEEEECCC
T ss_pred -H-----HHHHHHHHhcCCCEEEEEec
Confidence 1 12466788999999999875
No 400
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.80 E-value=0.0054 Score=56.92 Aligned_cols=63 Identities=11% Similarity=0.125 Sum_probs=43.4
Q ss_pred CEEEEEccChHHHHHHHHHccC---------CCeEEEEeCCCCChhHhhcCC--cccCHHHHhcccCEEEEcCCCC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY---------KVSKFLYTSRSKKPEADKRGA--EHTNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~---------G~~vv~~~~r~~~~~a~~~g~--~~~sl~ell~~aDvVil~lPlt 107 (274)
.+|||||+|.||+.+++.++.. +++++...++..... ...+. ...++++++ +.|+|+.|+|..
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~-~~~~~~~~~~d~~~ll-~iDvVve~t~~~ 77 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP-RAIPQELLRAEPFDLL-EADLVVEAMGGV 77 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC-CSSCGGGEESSCCCCT-TCSEEEECCCCS
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh-hccCcccccCCHHHHh-CCCEEEECCCCc
Confidence 4799999999999999988654 455555555443221 11111 123778888 899999999864
No 401
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.79 E-value=0.054 Score=48.17 Aligned_cols=98 Identities=19% Similarity=0.247 Sum_probs=62.4
Q ss_pred CCCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh--H----hhcCCc-------cc---CHHHHhc-----
Q psy3240 38 PALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE--A----DKRGAE-------HT---NIDDLCK----- 95 (274)
Q Consensus 38 ~~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a----~~~g~~-------~~---sl~ell~----- 95 (274)
.+++||++.|.|. |-||+++|+.|...|+++++.+++..... . ...+.. .. +.+++++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999985 89999999999999998777766543211 1 111211 11 2233333
Q ss_pred --ccCEEEEcCCCCcc-------c----HHh----------ccHHHHhcCCCCcEEEEcCCCc
Q psy3240 96 --QSDFIIITSALTPD-------T----HHL----------INRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 96 --~aDvVil~lPlt~~-------T----~~l----------i~~~~l~~mk~gailINv~RG~ 135 (274)
..|+++.+.-.... + ..+ +.+..++.|+++..+||+++..
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~ 185 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV 185 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence 57999987542210 1 111 1234577888888999998754
No 402
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.78 E-value=0.012 Score=52.80 Aligned_cols=70 Identities=14% Similarity=0.129 Sum_probs=46.1
Q ss_pred CCCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh--HhhcCCc-ccCHHHHhcccCEEEEcCCCC
Q psy3240 38 PALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRGAE-HTNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 38 ~~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g~~-~~sl~ell~~aDvVil~lPlt 107 (274)
.++.+|+|.|.|. |.||+.+++.|...|.++++.+++..... .....+. ..++.++++.+|+|+.+....
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~ 88 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM 88 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence 6789999999997 99999999999999998888776654311 1111111 124667888999999877543
No 403
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=95.78 E-value=0.035 Score=49.53 Aligned_cols=98 Identities=13% Similarity=0.159 Sum_probs=62.4
Q ss_pred CCCCCCEEEEEccC---hHHHHHHHHHccCCCeEEEEeCCCCChh-H----hhcC-Cc-----cc---CHHHHhc-----
Q psy3240 38 PALQNSTVGIVGCG---RIGLSVLEKLIPYKVSKFLYTSRSKKPE-A----DKRG-AE-----HT---NIDDLCK----- 95 (274)
Q Consensus 38 ~~L~gktVGIIGlG---~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a----~~~g-~~-----~~---sl~ell~----- 95 (274)
..+.||++.|.|.+ .||+++|+.|...|+++++.+++..... . ...+ +. .. +++++++
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57899999999985 8999999999999998777766543222 1 1111 11 11 2333443
Q ss_pred --ccCEEEEcCCCCc----------ccH----Hh----------ccHHHHhcCCCCcEEEEcCCCc
Q psy3240 96 --QSDFIIITSALTP----------DTH----HL----------INRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 96 --~aDvVil~lPlt~----------~T~----~l----------i~~~~l~~mk~gailINv~RG~ 135 (274)
..|+++.+.-... .+. .+ +.+..++.|+++..+||+++..
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~ 171 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYG 171 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGG
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehh
Confidence 4699998875432 111 01 1234567788888999988743
No 404
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.76 E-value=0.032 Score=51.44 Aligned_cols=87 Identities=11% Similarity=0.109 Sum_probs=60.5
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHhc-----ccCEEEEcCCC
Q psy3240 40 LQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLCK-----QSDFIIITSAL 106 (274)
Q Consensus 40 L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell~-----~aDvVil~lPl 106 (274)
-.|++|.|+|. |.+|...++.++..|+++++.. +..+.+ +++.|+..+ ++.+.+. ..|+|+-++..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc
Confidence 47899999999 8999999999999999766654 333444 677777531 3333322 37999988864
Q ss_pred CcccHHhccHHHHhcC-CCCcEEEEcC
Q psy3240 107 TPDTHHLINRARLESM-KPGAILINTS 132 (274)
Q Consensus 107 t~~T~~li~~~~l~~m-k~gailINv~ 132 (274)
... + ...++.+ +++..++.++
T Consensus 242 ~~~----~-~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 242 VES----T-TFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp HHH----H-HHHHHHSCTTCEEEEESS
T ss_pred hHH----H-HHHHHHhhcCCCEEEEEe
Confidence 221 1 2455667 5888888887
No 405
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=95.74 E-value=0.041 Score=50.91 Aligned_cols=94 Identities=10% Similarity=0.134 Sum_probs=68.2
Q ss_pred CCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCCh--hH----h----hcCC--c-ccCHHHHhcccCEEEEcC
Q psy3240 39 ALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKP--EA----D----KRGA--E-HTNIDDLCKQSDFIIITS 104 (274)
Q Consensus 39 ~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~--~a----~----~~g~--~-~~sl~ell~~aDvVil~l 104 (274)
.+.|.+|++||= .++.++++..+..+|+++.+..+..-.+ .. . +.|. . ..+++|+++.+|+|..-+
T Consensus 152 ~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~ 231 (321)
T 1oth_A 152 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT 231 (321)
T ss_dssp CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEec
Confidence 589999999996 4689999999999999877776655421 11 1 2343 2 248999999999999943
Q ss_pred ----CCCccc--------HHhccHHHHhcCCCCcEEEEcC
Q psy3240 105 ----ALTPDT--------HHLINRARLESMKPGAILINTS 132 (274)
Q Consensus 105 ----Plt~~T--------~~li~~~~l~~mk~gailINv~ 132 (274)
....+. ..-++.+.++.+||+++|.-+.
T Consensus 232 w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~l 271 (321)
T 1oth_A 232 WISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCL 271 (321)
T ss_dssp SSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECS
T ss_pred cccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCC
Confidence 111111 1336889999999999999986
No 406
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.74 E-value=0.012 Score=54.47 Aligned_cols=98 Identities=18% Similarity=0.320 Sum_probs=60.1
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hh--hcC-----C-c--cc-CHHHHhcccCEEEEc
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--AD--KRG-----A-E--HT-NIDDLCKQSDFIIIT 103 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~--~~g-----~-~--~~-sl~ell~~aDvVil~ 103 (274)
....++|+|||.|.||..+|..+...|. +++.+|....+.. +. ... . . .. +.+ .++.||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 4567899999999999999998876665 5677775433222 11 111 1 1 11 444 58999999998
Q ss_pred CCCCc---ccHH-hc--cH-------HHHhcCCCCcEEEEcCCCchhcH
Q psy3240 104 SALTP---DTHH-LI--NR-------ARLESMKPGAILINTSRGQLVDQ 139 (274)
Q Consensus 104 lPlt~---~T~~-li--~~-------~~l~~mk~gailINv~RG~iVde 139 (274)
..... .+|. ++ |. +.+....|++++++++ .++|.
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvdi 141 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS--NPVDI 141 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHHH
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec--ChHHH
Confidence 64321 1221 22 11 2333447899999998 44543
No 407
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.74 E-value=0.0058 Score=54.94 Aligned_cols=86 Identities=21% Similarity=0.166 Sum_probs=59.7
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc--CHHHHhcccCEEEEcCCCCcccHHhccHH
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT--NIDDLCKQSDFIIITSALTPDTHHLINRA 117 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~--sl~ell~~aDvVil~lPlt~~T~~li~~~ 117 (274)
.|++|.|+|.|.+|...++.++.+|+++++.+ +..+.+ +++.|+..+ +.+++-...|+|+-++.. +.+ ..
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~-~~~-----~~ 214 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNS-QNA-----AA 214 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCc-hhH-----HH
Confidence 68999999999999999999999999777766 555555 667776543 322223457999988764 222 24
Q ss_pred HHhcCCCCcEEEEcCC
Q psy3240 118 RLESMKPGAILINTSR 133 (274)
Q Consensus 118 ~l~~mk~gailINv~R 133 (274)
.++.++++..++.++-
T Consensus 215 ~~~~l~~~G~~v~~g~ 230 (315)
T 3goh_A 215 LVPSLKANGHIICIQD 230 (315)
T ss_dssp TGGGEEEEEEEEEECC
T ss_pred HHHHhcCCCEEEEEeC
Confidence 5677889999888853
No 408
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.72 E-value=0.017 Score=52.82 Aligned_cols=95 Identities=19% Similarity=0.225 Sum_probs=57.7
Q ss_pred CEEEEEccChHHHHHHHHHccCC--CeEEEEeCCCCChh--Hhh--c------CCcc-cCHHHHhcccCEEEEcCCCCcc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYK--VSKFLYTSRSKKPE--ADK--R------GAEH-TNIDDLCKQSDFIIITSALTPD 109 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G--~~vv~~~~r~~~~~--a~~--~------g~~~-~sl~ell~~aDvVil~lPlt~~ 109 (274)
+||+|||.|.+|.+++..|...+ -+.+.+|....+.. +.+ . .... .+..+.++.||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 58999999999999999987655 35666765432222 111 1 1111 1346679999999999875432
Q ss_pred ---c--------HHhcc--HHHHhcCCCCcEEEEcCCCchhcH
Q psy3240 110 ---T--------HHLIN--RARLESMKPGAILINTSRGQLVDQ 139 (274)
Q Consensus 110 ---T--------~~li~--~~~l~~mk~gailINv~RG~iVde 139 (274)
+ ..++. .+.+....|++++++++ .++|.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~ 121 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT--NPVDV 121 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHHH
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec--CchHH
Confidence 1 11111 01233337899999984 45544
No 409
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.72 E-value=0.027 Score=51.43 Aligned_cols=90 Identities=16% Similarity=0.180 Sum_probs=64.1
Q ss_pred CCCCCEEEEEcc---ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCcc-cCHHHHhcccCEEEEcCCCCccc---
Q psy3240 39 ALQNSTVGIVGC---GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEH-TNIDDLCKQSDFIIITSALTPDT--- 110 (274)
Q Consensus 39 ~L~gktVGIIGl---G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~-~sl~ell~~aDvVil~lPlt~~T--- 110 (274)
.+.|.+|+++|= +++.++.+..+..+|+++.+..+..-.+. ..+.|+.. .+++|+++.+|+|.. +-..-+-
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~q~er~~~ 221 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRLQKERQKE 221 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCCCTHHHHT
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCcccCcccc
Confidence 589999999996 89999999999999997777665443322 22345543 489999999999999 6543221
Q ss_pred -----------HHhccHHHHhcCCCCcEEEEcC
Q psy3240 111 -----------HHLINRARLESMKPGAILINTS 132 (274)
Q Consensus 111 -----------~~li~~~~l~~mk~gailINv~ 132 (274)
..-++.+.++.+| +|.-+.
T Consensus 222 ~~~~~~~~~~~~y~v~~~~l~~a~---i~mH~l 251 (291)
T 3d6n_B 222 NYIPSESSYFKQFGLTKERFEKVK---LYMHPG 251 (291)
T ss_dssp TSSSCHHHHHHHHSBCHHHHTTCC---CEECSS
T ss_pred ccchhHHHHHhhcCcCHHHHHhcc---cccCCC
Confidence 1235677777665 665554
No 410
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.71 E-value=0.014 Score=53.45 Aligned_cols=95 Identities=19% Similarity=0.201 Sum_probs=60.0
Q ss_pred CCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCCh--h-Hhh-cCCc------c---cCHHHHhcccCEEEEcCCC
Q psy3240 41 QNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKP--E-ADK-RGAE------H---TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~--~-a~~-~g~~------~---~sl~ell~~aDvVil~lPl 106 (274)
.+++|.|.| .|.||+.+++.|...|.++++.+++.... . ... .++. . .++.++++.+|+|+.+...
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 468899999 59999999999998899887777655543 1 111 1221 1 1356778899999977654
Q ss_pred CcccHHhccHHHHhcCCC-C--cEEEEcCCCc
Q psy3240 107 TPDTHHLINRARLESMKP-G--AILINTSRGQ 135 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~-g--ailINv~RG~ 135 (274)
............++.+++ | ..||++|+..
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 322222223444444432 3 4788888754
No 411
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=95.69 E-value=0.027 Score=52.02 Aligned_cols=109 Identities=12% Similarity=0.175 Sum_probs=63.2
Q ss_pred CEEEEEccChHHHHHHHHHcc-------CCCeEEEEeCCCCCh--------h----HhhcC-Cc--ccCHHHHhc--ccC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIP-------YKVSKFLYTSRSKKP--------E----ADKRG-AE--HTNIDDLCK--QSD 98 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~-------~G~~vv~~~~r~~~~--------~----a~~~g-~~--~~sl~ell~--~aD 98 (274)
.+|+|+|+|.||+.+++.++. .+++++...++.... . ....+ +. ..+.++++. +.|
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l~~~~iD 84 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGEAAD 84 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGGTTSCCS
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHhcCCCCC
Confidence 479999999999999999975 355556655554320 0 11223 21 116677774 489
Q ss_pred EEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCCCchh-cHHHHHhhhhhhhhe
Q psy3240 99 FIIITSALTPDTHHLINRARLESMKPGAILINTSRGQLV-DQEALIDFIADIRVI 152 (274)
Q Consensus 99 vVil~lPlt~~T~~li~~~~l~~mk~gailINv~RG~iV-de~aL~~~L~~~~i~ 152 (274)
+|+.++|......... .-....++.|.-+|-..-+.+. .-+.|.+.-+++|+.
T Consensus 85 vVVe~T~~~~~~~pa~-~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~ 138 (325)
T 3ing_A 85 LLVDCTPASRDGVREY-SLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKY 138 (325)
T ss_dssp EEEECCCCCSSSHHHH-HHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEECCCCccccchHH-HHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCe
Confidence 9999999642211101 1233345666666655444432 344666655566664
No 412
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.69 E-value=0.022 Score=52.25 Aligned_cols=96 Identities=21% Similarity=0.265 Sum_probs=58.7
Q ss_pred CCEEEEEc-cChHHHHHHHHHccCC--CeEEEEeCCCCChhH---hhcCC----cc----cCHHHHhcccCEEEEcCCCC
Q psy3240 42 NSTVGIVG-CGRIGLSVLEKLIPYK--VSKFLYTSRSKKPEA---DKRGA----EH----TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 42 gktVGIIG-lG~IG~~iA~~L~~~G--~~vv~~~~r~~~~~a---~~~g~----~~----~sl~ell~~aDvVil~lPlt 107 (274)
.++|+|+| .|.+|..++..|...| .+++.+|.+.....+ ..... .. .++.+.++.||+|+++.+..
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~ 87 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVP 87 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcC
Confidence 36899999 8999999999998777 556677754331111 11111 11 14578899999999998643
Q ss_pred cc---cH-Hh--cc----H---HHHhcCCCCcEEEEcCCCchhcH
Q psy3240 108 PD---TH-HL--IN----R---ARLESMKPGAILINTSRGQLVDQ 139 (274)
Q Consensus 108 ~~---T~-~l--i~----~---~~l~~mk~gailINv~RG~iVde 139 (274)
.. ++ .+ .| . +.+....+.+++++++ .++|.
T Consensus 88 ~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S--NPv~~ 130 (326)
T 1smk_A 88 RKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS--NPVNS 130 (326)
T ss_dssp CCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC--SSHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CchHH
Confidence 21 10 00 11 1 1222235788999874 56665
No 413
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.69 E-value=0.02 Score=55.62 Aligned_cols=100 Identities=13% Similarity=0.250 Sum_probs=69.7
Q ss_pred CCCCCCCEEEEEccC----------hHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcc-cCHHHHhcccCEEEEcCC
Q psy3240 37 GPALQNSTVGIVGCG----------RIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEH-TNIDDLCKQSDFIIITSA 105 (274)
Q Consensus 37 g~~L~gktVGIIGlG----------~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~-~sl~ell~~aDvVil~lP 105 (274)
|..++|++|+|+|+- .=...+++.|...|+++.+||+..... . .... .++++.++.+|+|+++++
T Consensus 348 ~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~--~--~~~~~~~~~~~~~~ad~vvi~t~ 423 (478)
T 3g79_A 348 GKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNY--P--GVEISDNLEEVVRNADAIVVLAG 423 (478)
T ss_dssp TCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCB--T--TBCEESCHHHHHTTCSEEEECSC
T ss_pred ccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccc--c--CcceecCHHHHHhcCCEEEEecC
Confidence 357999999999974 336899999999999888888765421 1 1222 388999999999999887
Q ss_pred CCcccHHhccHH-HHhcCC-CCcEEEEcCCCchhcHHHHHh
Q psy3240 106 LTPDTHHLINRA-RLESMK-PGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 106 lt~~T~~li~~~-~l~~mk-~gailINv~RG~iVde~aL~~ 144 (274)
- ++-+. ++.+ ..+.|+ +..+++|+ |+- .|.+.+.+
T Consensus 424 ~-~~f~~-~d~~~~~~~~~~~~~~i~D~-rn~-~~~~~~~~ 460 (478)
T 3g79_A 424 H-SAYSS-LKADWAKKVSAKANPVIIDG-RNV-IEPDEFIG 460 (478)
T ss_dssp C-HHHHS-CCHHHHHHHHCCSSCEEEES-SSC-SCHHHHHT
T ss_pred C-HHHHh-hhHHHHHHHhccCCCEEEEC-CCC-CCHHHHHh
Confidence 4 22222 3433 344566 47899995 654 56665544
No 414
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.68 E-value=0.014 Score=52.94 Aligned_cols=85 Identities=14% Similarity=0.192 Sum_probs=56.9
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCccc-----C---HHHH-hcccCEEEEcCCCCcccHH
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHT-----N---IDDL-CKQSDFIIITSALTPDTHH 112 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~-----s---l~el-l~~aDvVil~lPlt~~T~~ 112 (274)
.+++.|+|+|.+|+.+|+.|...|. +++.+...........+.... + ++++ +++||.|+++++.. ..+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d--~~n 191 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--SET 191 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSH--HHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCcc--HHH
Confidence 5689999999999999999999998 777765443222223444321 2 3344 67899999998864 334
Q ss_pred hccHHHHhcCCCCcEEE
Q psy3240 113 LINRARLESMKPGAILI 129 (274)
Q Consensus 113 li~~~~l~~mk~gailI 129 (274)
+.-...++.+.+...+|
T Consensus 192 ~~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 192 IHCILGIRKIDESVRII 208 (336)
T ss_dssp HHHHHHHHTTCTTSEEE
T ss_pred HHHHHHHHHHCCCCeEE
Confidence 44456677777774444
No 415
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.65 E-value=0.012 Score=51.48 Aligned_cols=96 Identities=14% Similarity=0.189 Sum_probs=57.5
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh----HhhcCCc-ccCHHHHhcc-cCEEEEcCCCCccc-HH-
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE----ADKRGAE-HTNIDDLCKQ-SDFIIITSALTPDT-HH- 112 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~----a~~~g~~-~~sl~ell~~-aDvVil~lPlt~~T-~~- 112 (274)
++++|.|.|.|.||+.+++.|...|.++++.+++..... .....+. ..+++++++. +|+|+.+...+... ..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~ 81 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYSDEHY 81 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC----
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCCHHHH
Confidence 467899999999999999999999998888776544321 0011111 1234556666 99998876432110 00
Q ss_pred ----hc-cHHHHhcCC-CC-cEEEEcCCCch
Q psy3240 113 ----LI-NRARLESMK-PG-AILINTSRGQL 136 (274)
Q Consensus 113 ----li-~~~~l~~mk-~g-ailINv~RG~i 136 (274)
+. ....++.++ .+ ..||.+|+..+
T Consensus 82 ~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~v 112 (286)
T 3gpi_A 82 RLSYVEGLRNTLSALEGAPLQHVFFVSSTGV 112 (286)
T ss_dssp -CCSHHHHHHHHHHTTTSCCCEEEEEEEGGG
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEEcccEE
Confidence 00 123444444 23 46888876543
No 416
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.64 E-value=0.018 Score=54.58 Aligned_cols=65 Identities=15% Similarity=0.218 Sum_probs=46.7
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcC----Cccc---CHHHHhcccCEEEE
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRG----AEHT---NIDDLCKQSDFIII 102 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g----~~~~---sl~ell~~aDvVil 102 (274)
+-+.|++|+|+|-|.+|+.+++.++.+|.+++++++....+...-.. ..+. .+.++++++|+|+.
T Consensus 31 ~~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 31 PILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 35689999999999999999999999999888887554444311111 1111 34566778999984
No 417
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.64 E-value=0.02 Score=50.02 Aligned_cols=65 Identities=11% Similarity=0.146 Sum_probs=46.1
Q ss_pred CEEEEEc-cChHHHHHHHHHccC-CCeEEEEeCCCCChh-HhhcCCcc--------cCHHHHhcccCEEEEcCCCC
Q psy3240 43 STVGIVG-CGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE-ADKRGAEH--------TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 43 ktVGIIG-lG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~-a~~~g~~~--------~sl~ell~~aDvVil~lPlt 107 (274)
++|.|.| .|.||+.+++.|... |.++++..++..+.. ....+++. .++.++++.+|+|+.+....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 76 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSII 76 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 4689999 599999999999887 888877776544322 12223321 14667889999999887754
No 418
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.64 E-value=0.0085 Score=54.38 Aligned_cols=87 Identities=15% Similarity=0.061 Sum_probs=60.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-Hh-hcCCccc-------CHHHHhc-----ccCEEEEcCC
Q psy3240 41 QNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-AD-KRGAEHT-------NIDDLCK-----QSDFIIITSA 105 (274)
Q Consensus 41 ~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~-~~g~~~~-------sl~ell~-----~aDvVil~lP 105 (274)
.|++|.|+|. |.||..+++.++..|+++++.+++..+.+ +. +.|+... ++.+.+. ..|+|+.++.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 234 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVG 234 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence 5899999997 99999999999999997666665443333 44 4665321 2333332 4789888775
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
. + .-...++.++++..++.++.
T Consensus 235 ~-~-----~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 235 G-K-----MLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp H-H-----HHHHHHTTEEEEEEEEECCC
T ss_pred H-H-----HHHHHHHHHhcCCEEEEEcc
Confidence 3 1 12456778888888888874
No 419
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.63 E-value=0.015 Score=52.93 Aligned_cols=105 Identities=13% Similarity=0.115 Sum_probs=62.6
Q ss_pred CEEEEEccChHHHHHHHHHccCCCeEEEEeCCCC--Chh-H----hhcCC--c-ccCHHHHhcc--cCEEEEcCCCCccc
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSK--KPE-A----DKRGA--E-HTNIDDLCKQ--SDFIIITSALTPDT 110 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~--~~~-a----~~~g~--~-~~sl~ell~~--aDvVil~lPlt~~T 110 (274)
.+|||||+|.+|+..++.+ .-+++++.+.++.. ..+ . .+.++ . +.++++++++ .|+|++++|.....
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~ 81 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSLNG 81 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHHHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcchHH
Confidence 5899999999999888777 56777776655543 222 1 12354 2 3489999975 89999999853222
Q ss_pred HHhccHHHHhcCCCCcEEEEcC-CCchhcHHHHHhhhhhhhhe
Q psy3240 111 HHLINRARLESMKPGAILINTS-RGQLVDQEALIDFIADIRVI 152 (274)
Q Consensus 111 ~~li~~~~l~~mk~gailINv~-RG~iVde~aL~~~L~~~~i~ 152 (274)
. +-...++.=| .+++.-- --.+-+.++|++..++.|+.
T Consensus 82 ~--~~~~al~aGk--hVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 82 K--ILLEALERKI--HAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp H--HHHHHHHTTC--EEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred H--HHHHHHHCCC--cEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 1 2223333222 2444321 22334566677766666654
No 420
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.62 E-value=0.014 Score=54.31 Aligned_cols=87 Identities=18% Similarity=0.271 Sum_probs=53.0
Q ss_pred CEEEEEc-cChHHHHHHHHHcc-CCCeEEEEeCCC---C--ChhHh----hcC---Cccc---CHHHHhcccCEEEEcCC
Q psy3240 43 STVGIVG-CGRIGLSVLEKLIP-YKVSKFLYTSRS---K--KPEAD----KRG---AEHT---NIDDLCKQSDFIIITSA 105 (274)
Q Consensus 43 ktVGIIG-lG~IG~~iA~~L~~-~G~~vv~~~~r~---~--~~~a~----~~g---~~~~---sl~ell~~aDvVil~lP 105 (274)
.+|+|+| .|.+|+.+.+.|.. -.++.+....+. . ++... -.+ .... +.+++++++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 5899999 69999999999986 344444443333 1 11110 112 1211 34555589999999999
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
... ++... .+. ++.|+.+||.|.-
T Consensus 85 ~~~-s~~~~-~~~---~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 85 HEV-SHDLA-PQF---LEAGCVVFDLSGA 108 (337)
T ss_dssp HHH-HHHHH-HHH---HHTTCEEEECSST
T ss_pred hHH-HHHHH-HHH---HHCCCEEEEcCCc
Confidence 532 22222 122 3679999999854
No 421
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.61 E-value=0.034 Score=53.31 Aligned_cols=94 Identities=10% Similarity=0.171 Sum_probs=66.1
Q ss_pred CCCCCEEEEEccCh----------HHHHHHHHHccCCCeEEEEeCCCCChhH-hhc-------------CCccc-CHHHH
Q psy3240 39 ALQNSTVGIVGCGR----------IGLSVLEKLIPYKVSKFLYTSRSKKPEA-DKR-------------GAEHT-NIDDL 93 (274)
Q Consensus 39 ~L~gktVGIIGlG~----------IG~~iA~~L~~~G~~vv~~~~r~~~~~a-~~~-------------g~~~~-sl~el 93 (274)
.+.|++|+|+|+-- -...+++.|...|+++.+||+....... ... ++..+ ++.+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 58999999999873 7889999999999988888876443221 111 23333 68889
Q ss_pred hcccCEEEEcCCCCcccHHhccHH-HHhcCCCCcEEEEcCCCc
Q psy3240 94 CKQSDFIIITSALTPDTHHLINRA-RLESMKPGAILINTSRGQ 135 (274)
Q Consensus 94 l~~aDvVil~lPlt~~T~~li~~~-~l~~mk~gailINv~RG~ 135 (274)
++.+|+|++++.-. +-+. ++.+ ..+.|+...+++|. |+-
T Consensus 406 ~~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~~~~~i~D~-r~~ 445 (467)
T 2q3e_A 406 CDGAHAVVICTEWD-MFKE-LDYERIHKKMLKPAFIFDG-RRV 445 (467)
T ss_dssp HTTCSEEEECSCCG-GGGG-SCHHHHHHHSCSSCEEEES-SCT
T ss_pred HhCCcEEEEecCCh-hhhc-CCHHHHHHhcCCCCEEEeC-CCc
Confidence 99999999988753 3333 3443 44567776668887 543
No 422
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=95.61 E-value=0.042 Score=51.63 Aligned_cols=95 Identities=19% Similarity=0.236 Sum_probs=69.6
Q ss_pred CCCCCEEEEEccC--hHHHHHHHHHccCCCeEEEEeCCCCChh--H--------hhcCCc---ccCHHHHhcccCEEEEc
Q psy3240 39 ALQNSTVGIVGCG--RIGLSVLEKLIPYKVSKFLYTSRSKKPE--A--------DKRGAE---HTNIDDLCKQSDFIIIT 103 (274)
Q Consensus 39 ~L~gktVGIIGlG--~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a--------~~~g~~---~~sl~ell~~aDvVil~ 103 (274)
.|.|.+|+++|=| ++..+++..+..+|+++.+..+..-.+. . .+.|.. ..+++|+++.+|||..-
T Consensus 173 ~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 252 (359)
T 2w37_A 173 KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTD 252 (359)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEc
Confidence 6899999999985 9999999999999998777665442221 1 134543 24899999999999984
Q ss_pred CCC--Cc----c-----cHHhccHHHHhcCC---CCcEEEEcCC
Q psy3240 104 SAL--TP----D-----THHLINRARLESMK---PGAILINTSR 133 (274)
Q Consensus 104 lPl--t~----~-----T~~li~~~~l~~mk---~gailINv~R 133 (274)
.=. .. + ...-++.+.++.+| |+++|.-+.=
T Consensus 253 ~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcLP 296 (359)
T 2w37_A 253 VWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLP 296 (359)
T ss_dssp CSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSC
T ss_pred ccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCCC
Confidence 431 11 0 12345889999999 9999998864
No 423
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.59 E-value=0.012 Score=54.72 Aligned_cols=92 Identities=12% Similarity=0.149 Sum_probs=62.1
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCe-EEEEeCCCCChh-HhhcCCccc-----C-HHHHh------cccCEEEEcCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVS-KFLYTSRSKKPE-ADKRGAEHT-----N-IDDLC------KQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~-vv~~~~r~~~~~-a~~~g~~~~-----s-l~ell------~~aDvVil~lPl 106 (274)
.|++|.|+|.|.+|...++.++.+|++ +++.+....+.+ +++.|+... + +.+.+ ...|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~ 264 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 589999999999999999999999994 555555444444 667776422 1 33322 147999998875
Q ss_pred Cccc-----------HHhccHHHHhcCCCCcEEEEcCC
Q psy3240 107 TPDT-----------HHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 107 t~~T-----------~~li~~~~l~~mk~gailINv~R 133 (274)
.... ...+ ...++.++++..++.++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 265 EARGHGHEGAKHEAPATVL-NSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp TCBCSSTTGGGSBCTTHHH-HHHHHHEEEEEEEEECSC
T ss_pred cccccccccccccchHHHH-HHHHHHHhcCCEEEEecc
Confidence 3210 0112 356777888888888874
No 424
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=95.56 E-value=0.021 Score=50.77 Aligned_cols=67 Identities=16% Similarity=0.100 Sum_probs=43.9
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh---Hhhc----CCcc-----c---CHHHHhcc--cCEEE
Q psy3240 40 LQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE---ADKR----GAEH-----T---NIDDLCKQ--SDFII 101 (274)
Q Consensus 40 L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~---a~~~----g~~~-----~---sl~ell~~--aDvVi 101 (274)
+.|++|.|.|. |.||+.+++.|...|.++++.+++..... .... ++.. . ++.++++. .|+|+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 80 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY 80 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence 35789999996 99999999999999997777765543211 1111 1211 1 34456665 49998
Q ss_pred EcCCC
Q psy3240 102 ITSAL 106 (274)
Q Consensus 102 l~lPl 106 (274)
.+...
T Consensus 81 h~A~~ 85 (345)
T 2z1m_A 81 NLAAQ 85 (345)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 88764
No 425
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.56 E-value=0.017 Score=53.89 Aligned_cols=36 Identities=28% Similarity=0.462 Sum_probs=30.9
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEE-EeC
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFL-YTS 73 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~-~~~ 73 (274)
..|++++|.|||+|.+|..+|+.|...|...+. +|.
T Consensus 30 ~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~ 66 (340)
T 3rui_A 30 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDN 66 (340)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecC
Confidence 468999999999999999999999999986654 443
No 426
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=95.55 E-value=0.022 Score=51.88 Aligned_cols=85 Identities=14% Similarity=0.138 Sum_probs=61.3
Q ss_pred CEEEEE-ccChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHh------cccCEEEEcCCCCc
Q psy3240 43 STVGIV-GCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLC------KQSDFIIITSALTP 108 (274)
Q Consensus 43 ktVGII-GlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell------~~aDvVil~lPlt~ 108 (274)
++|.|. |.|.||...++.++..|+++++.+.+..+.+ +++.|+..+ ++.+.+ ...|+|+-++.. +
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~-~ 244 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG-P 244 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH-H
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC-h
Confidence 677666 8999999999999999998777776555544 666676421 333322 258999998763 1
Q ss_pred ccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 109 DTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~gailINv~R 133 (274)
. + ...++.++++..++.++.
T Consensus 245 ~----~-~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 245 L----A-SAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp H----H-HHHHHHSCTTCEEEECCC
T ss_pred h----H-HHHHhhhcCCCEEEEEec
Confidence 1 1 567788999999999974
No 427
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=95.53 E-value=0.058 Score=50.03 Aligned_cols=101 Identities=14% Similarity=0.224 Sum_probs=71.0
Q ss_pred CCCCCEEEEEccC--hHHHHHHHHHccCCCeEEEEeCCCCC--hh------Hh----h--cCCc--c-cCHHHHhcccCE
Q psy3240 39 ALQNSTVGIVGCG--RIGLSVLEKLIPYKVSKFLYTSRSKK--PE------AD----K--RGAE--H-TNIDDLCKQSDF 99 (274)
Q Consensus 39 ~L~gktVGIIGlG--~IG~~iA~~L~~~G~~vv~~~~r~~~--~~------a~----~--~g~~--~-~sl~ell~~aDv 99 (274)
.+.|++|++||=| ++..+++..+..+|+++.+..+..-. +. +. + .|.. . .+++|+++.+||
T Consensus 158 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDv 237 (328)
T 3grf_A 158 GFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDV 237 (328)
T ss_dssp TGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSE
T ss_pred ccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCE
Confidence 6999999999965 89999999999999977776665432 11 11 1 3543 2 389999999999
Q ss_pred EEEc----CCCCc----c-----cHHhccHHHHhcCCCCcEEEEcC---CCchhcH
Q psy3240 100 IIIT----SALTP----D-----THHLINRARLESMKPGAILINTS---RGQLVDQ 139 (274)
Q Consensus 100 Vil~----lPlt~----~-----T~~li~~~~l~~mk~gailINv~---RG~iVde 139 (274)
|..- +...+ + ....++.+.++.+|++++|.-+. ||.=|+.
T Consensus 238 vytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~lPa~Rg~EI~~ 293 (328)
T 3grf_A 238 VYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTA 293 (328)
T ss_dssp EEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCH
T ss_pred EEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCCCCCCCCccCH
Confidence 9873 22111 1 11336899999999999999886 6654443
No 428
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.53 E-value=0.019 Score=49.92 Aligned_cols=64 Identities=14% Similarity=0.256 Sum_probs=45.8
Q ss_pred CEEEEEcc-ChHHHHHHHHHccC--CCeEEEEeCCCCChh-HhhcCCcc--------cCHHHHhcccCEEEEcCCC
Q psy3240 43 STVGIVGC-GRIGLSVLEKLIPY--KVSKFLYTSRSKKPE-ADKRGAEH--------TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 43 ktVGIIGl-G~IG~~iA~~L~~~--G~~vv~~~~r~~~~~-a~~~g~~~--------~sl~ell~~aDvVil~lPl 106 (274)
|+|.|.|. |.||+.+++.|... |.++++.+++..+.. ....++.. .++.++++.+|+|+.+...
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 46889986 99999999999988 888888776554332 22223321 1456778899999987754
No 429
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.52 E-value=0.029 Score=50.25 Aligned_cols=71 Identities=14% Similarity=0.203 Sum_probs=50.0
Q ss_pred CCCCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh--Hhh-cCCc-----cc---CHHHHhc--ccCEEEE
Q psy3240 37 GPALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADK-RGAE-----HT---NIDDLCK--QSDFIII 102 (274)
Q Consensus 37 g~~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~-~g~~-----~~---sl~ell~--~aDvVil 102 (274)
-+++.+++|.|.|. |.||+.+++.|...|.++++.+++..... ... .++. .. +++++++ .+|+|+.
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVH 94 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence 36899999999996 99999999999999998777776443221 011 1111 11 3556777 8999998
Q ss_pred cCCCC
Q psy3240 103 TSALT 107 (274)
Q Consensus 103 ~lPlt 107 (274)
+....
T Consensus 95 ~A~~~ 99 (330)
T 2pzm_A 95 SAAAY 99 (330)
T ss_dssp CCCCC
T ss_pred CCccC
Confidence 87643
No 430
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.51 E-value=0.01 Score=55.32 Aligned_cols=93 Identities=12% Similarity=0.111 Sum_probs=63.3
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCC-eEEEEeCCCCChh-HhhcCCccc-----CH-HHHhc------ccCEEEEcCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADKRGAEHT-----NI-DDLCK------QSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~~g~~~~-----sl-~ell~------~aDvVil~lPl 106 (274)
.|++|.|+|.|.+|...++.++.+|+ ++++.+.+..+.+ +++.|+... ++ .+.+. ..|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~ 264 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 58999999999999999999999999 6666665544444 566676422 22 33221 48999998875
Q ss_pred Ccc----------cHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 107 TPD----------THHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 107 t~~----------T~~li~~~~l~~mk~gailINv~RG 134 (274)
... ....+ .+.++.++++..++.++..
T Consensus 265 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 265 EAHGLGDEANTETPNGAL-NSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp TCBCSGGGTTSBCTTHHH-HHHHHHEEEEEEEECCSCC
T ss_pred ccccccccccccccHHHH-HHHHHHHhcCCEEEEeccc
Confidence 320 00112 3567778899999888753
No 431
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=95.49 E-value=0.027 Score=54.77 Aligned_cols=65 Identities=28% Similarity=0.459 Sum_probs=42.6
Q ss_pred CCEEEEEccChHH--HHHHHHHc---cC-CCeEEEEeCCCCChh-----Hh----hcCC----cc-cCHHHHhcccCEEE
Q psy3240 42 NSTVGIVGCGRIG--LSVLEKLI---PY-KVSKFLYTSRSKKPE-----AD----KRGA----EH-TNIDDLCKQSDFII 101 (274)
Q Consensus 42 gktVGIIGlG~IG--~~iA~~L~---~~-G~~vv~~~~r~~~~~-----a~----~~g~----~~-~sl~ell~~aDvVi 101 (274)
.++|+|||.|.|| .++|..|. ++ |.+++.+|....+.+ .. ..+. .. .++++.++.||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 4699999999974 55566553 33 776777776543211 00 1111 11 27788999999999
Q ss_pred EcCCC
Q psy3240 102 ITSAL 106 (274)
Q Consensus 102 l~lPl 106 (274)
+++|.
T Consensus 83 iaagv 87 (480)
T 1obb_A 83 NTAMV 87 (480)
T ss_dssp ECCCT
T ss_pred ECCCc
Confidence 99974
No 432
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.48 E-value=0.016 Score=52.65 Aligned_cols=87 Identities=10% Similarity=0.121 Sum_probs=59.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHh------cccCEEEEcCCC
Q psy3240 41 QNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLC------KQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell------~~aDvVil~lPl 106 (274)
.|++|.|+|. |.||..+++.++..|+++++.+++..+.+ +.+.|+... ++.+.+ ...|+|+.++.
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g- 244 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG- 244 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 5899999999 99999999999999997777665443333 444555321 222222 24788888876
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~R 133 (274)
.+. -...++.|+++..++.++.
T Consensus 245 ~~~-----~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 245 ALY-----FEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp SSS-----HHHHHHHEEEEEEEEESSC
T ss_pred HHH-----HHHHHHhhccCCEEEEEec
Confidence 322 2355667788888888875
No 433
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.43 E-value=0.031 Score=50.36 Aligned_cols=64 Identities=22% Similarity=0.475 Sum_probs=45.0
Q ss_pred CCEEEEEc-cChHHHHHHHHHcc-CCCeEEEEeCCCCChh----H-h----hcCCcc-cCHHHHhcccCEEEEcCC
Q psy3240 42 NSTVGIVG-CGRIGLSVLEKLIP-YKVSKFLYTSRSKKPE----A-D----KRGAEH-TNIDDLCKQSDFIIITSA 105 (274)
Q Consensus 42 gktVGIIG-lG~IG~~iA~~L~~-~G~~vv~~~~r~~~~~----a-~----~~g~~~-~sl~ell~~aDvVil~lP 105 (274)
-.+|+|+| +|.||+.+++.+.. -+++.+...++..... + . ..++.. .++++++.++|+|+-+.+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~ 82 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL 82 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC
Confidence 36899999 89999999998864 4676666555443211 0 0 113433 389999999999998875
No 434
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.43 E-value=0.013 Score=53.20 Aligned_cols=89 Identities=12% Similarity=0.091 Sum_probs=61.7
Q ss_pred CCCCEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh-HhhcCCccc-----CHHHH----hc--ccCEEEEcCCC
Q psy3240 40 LQNSTVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE-ADKRGAEHT-----NIDDL----CK--QSDFIIITSAL 106 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~-a~~~g~~~~-----sl~el----l~--~aDvVil~lPl 106 (274)
-.|.+|.|+|.|.+|...++.++.. |.++++.+.+..+.+ +++.|+..+ ++.+. .. ..|+|+-++..
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~ 249 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGA 249 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCC
Confidence 3589999999999999999999988 666666665554444 667777532 22222 11 58999998864
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~R 133 (274)
... + ...++.++++..++.++-
T Consensus 250 ~~~----~-~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 250 QST----I-DTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp HHH----H-HHHHHHEEEEEEEEECSC
T ss_pred HHH----H-HHHHHHHhcCCEEEEECC
Confidence 211 2 356677888888888874
No 435
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.41 E-value=0.014 Score=52.60 Aligned_cols=87 Identities=14% Similarity=0.158 Sum_probs=59.6
Q ss_pred CCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHh------cccCEEEEcCCC
Q psy3240 41 QNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLC------KQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell------~~aDvVil~lPl 106 (274)
.|++|.|.| .|.||..+++.++..|+++++.+++..+.+ +.+.|.... +..+.+ ...|+|+.++.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g- 218 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG- 218 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc-
Confidence 589999999 799999999999999997776665433333 444554321 222222 14799998876
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~R 133 (274)
. .+ -...++.|+++..++.++.
T Consensus 219 ~-~~----~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 219 R-DT----WERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp G-GG----HHHHHHTEEEEEEEEECCC
T ss_pred h-HH----HHHHHHHhcCCCEEEEEec
Confidence 2 21 2456778888888988875
No 436
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.40 E-value=0.01 Score=55.25 Aligned_cols=66 Identities=20% Similarity=0.344 Sum_probs=45.9
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHccCCC--eEEEEeCCCCChh--H--hhc------CCcc-cCHHHHhcccCEEEEcCC
Q psy3240 40 LQNSTVGIVGC-GRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--A--DKR------GAEH-TNIDDLCKQSDFIIITSA 105 (274)
Q Consensus 40 L~gktVGIIGl-G~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a--~~~------g~~~-~sl~ell~~aDvVil~lP 105 (274)
+.+++|+|||. |.+|+.+|..+...|. +++.+|....+.. + ... .+.. .++.+.++.||+|+++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 35689999998 9999999988877774 5777775433222 1 111 1122 367888999999999863
No 437
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=95.38 E-value=0.037 Score=53.36 Aligned_cols=64 Identities=19% Similarity=0.195 Sum_probs=46.2
Q ss_pred CCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCC
Q psy3240 42 NSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 42 gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPl 106 (274)
+++|.|.| .|.||+.+++.|...|.++++.+++..+......... ..+.+++..+|+|+.+...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~-~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPL-NPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTT-SCCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeeccc-chhHHhcCCCCEEEECCCC
Confidence 68999999 6999999999999999988777766544321111111 1345677899999987654
No 438
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.38 E-value=0.018 Score=53.59 Aligned_cols=38 Identities=32% Similarity=0.473 Sum_probs=31.1
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeE-EEEeCCC
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSK-FLYTSRS 75 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~v-v~~~~r~ 75 (274)
..|++++|.|||+|.+|..+|+.|...|... .++|...
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 3578999999999999999999999888754 4555543
No 439
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.38 E-value=0.026 Score=47.83 Aligned_cols=68 Identities=18% Similarity=0.211 Sum_probs=48.8
Q ss_pred CCCCEEEEEc-cChHHHHHHHHHccCCC--eEEEEeCCCCChh-HhhcCCc--------ccCHHHHhcccCEEEEcCCCC
Q psy3240 40 LQNSTVGIVG-CGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE-ADKRGAE--------HTNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 40 L~gktVGIIG-lG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~-a~~~g~~--------~~sl~ell~~aDvVil~lPlt 107 (274)
+.+|++.|.| .|.||+.+++.|...|. ++++.+++..... ....++. ..+++++++..|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5689999999 69999999999999998 8888776554322 1111221 124556788899999988654
No 440
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.36 E-value=0.05 Score=52.59 Aligned_cols=102 Identities=14% Similarity=0.189 Sum_probs=68.5
Q ss_pred CCCCCCCEEEEEccC----------hHHHHHHHHHccCCCeEEEEeCCCCChhHhhc------------CCccc-CHHHH
Q psy3240 37 GPALQNSTVGIVGCG----------RIGLSVLEKLIPYKVSKFLYTSRSKKPEADKR------------GAEHT-NIDDL 93 (274)
Q Consensus 37 g~~L~gktVGIIGlG----------~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~------------g~~~~-sl~el 93 (274)
+.++.|++|+|+|+- .=...+++.|...|+++.+||+.......... .+..+ ++++.
T Consensus 323 ~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (478)
T 2y0c_A 323 GEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQA 402 (478)
T ss_dssp CSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHH
T ss_pred cccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHH
Confidence 346999999999984 35788999999999988888876432111111 23443 68899
Q ss_pred hcccCEEEEcCCCCcccHHhccHHHH-hcCCCCcEEEEcCCCchhcHHHHH
Q psy3240 94 CKQSDFIIITSALTPDTHHLINRARL-ESMKPGAILINTSRGQLVDQEALI 143 (274)
Q Consensus 94 l~~aDvVil~lPlt~~T~~li~~~~l-~~mk~gailINv~RG~iVde~aL~ 143 (274)
++.+|+|++++.-. +-+. ++.+.+ +.|+ ..+++|+ |+ +.+.+.+.
T Consensus 403 ~~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~-~~~i~D~-r~-~~~~~~~~ 448 (478)
T 2y0c_A 403 ARDADALVIVTEWK-IFKS-PDFVALGRLWK-TPVIFDG-RN-LYEPETMS 448 (478)
T ss_dssp TTTCSEEEECSCCG-GGGS-CCHHHHHTTCS-SCEEEES-SC-CSCHHHHH
T ss_pred HhCCCEEEEecCCh-Hhhc-cCHHHHHhhcC-CCEEEEC-CC-CCCHHHHH
Confidence 99999999988753 3222 344444 4555 4789998 44 34555443
No 441
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.35 E-value=0.038 Score=51.73 Aligned_cols=86 Identities=20% Similarity=0.266 Sum_probs=53.3
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeC-CCCChh-Hh--h----cC-------------------Cccc---CHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTS-RSKKPE-AD--K----RG-------------------AEHT---NID 91 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~-r~~~~~-a~--~----~g-------------------~~~~---sl~ 91 (274)
.+|||+|+|.||+.+.|.|... .++++...+ ...... +. + .| +... +++
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 97 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPA 97 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGG
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChH
Confidence 4899999999999999998765 676666665 332210 00 0 00 0011 444
Q ss_pred HHh---cccCEEEEcCCCCcccHHhccHHHHhcCCCCc--EEEEcCC
Q psy3240 92 DLC---KQSDFIIITSALTPDTHHLINRARLESMKPGA--ILINTSR 133 (274)
Q Consensus 92 ell---~~aDvVil~lPlt~~T~~li~~~~l~~mk~ga--ilINv~R 133 (274)
++. ..+|+|+.|+|.....+ ..-..++.|+ ++|+.+.
T Consensus 98 ~i~w~~~~vDvV~eatg~~~s~e-----~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 98 EIPWGASGAQIVCESTGVFTTEE-----KASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GCCHHHHTCCEEEECSSSCCSHH-----HHGGGGTTTCSEEEESSCC
T ss_pred HCCcccCCCCEEEECCCchhhHH-----HHHHHHHcCCcEEEEeCCC
Confidence 432 46999999999643321 2223456788 9998865
No 442
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.35 E-value=0.062 Score=48.59 Aligned_cols=68 Identities=16% Similarity=0.216 Sum_probs=47.1
Q ss_pred CCCCCEEEEEc-cChHHHHHHHHHccC-CCeEEEEeCCCCChh-Hh-hcCCcc---------cCHHHHhcccCEEEEcCC
Q psy3240 39 ALQNSTVGIVG-CGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE-AD-KRGAEH---------TNIDDLCKQSDFIIITSA 105 (274)
Q Consensus 39 ~L~gktVGIIG-lG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~-a~-~~g~~~---------~sl~ell~~aDvVil~lP 105 (274)
.+.+++|.|.| .|.||+.+++.|... |.++++.+++..... .. ..++.. .+++++++.+|+|+.+..
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 46789999999 699999999999887 888888776554332 11 122221 135567889999998665
Q ss_pred C
Q psy3240 106 L 106 (274)
Q Consensus 106 l 106 (274)
.
T Consensus 101 ~ 101 (372)
T 3slg_A 101 I 101 (372)
T ss_dssp C
T ss_pred c
Confidence 4
No 443
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.35 E-value=0.057 Score=47.66 Aligned_cols=66 Identities=12% Similarity=0.159 Sum_probs=45.8
Q ss_pred CCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChhHh-----hcCCcccCHHHHhcccCEEEEcCCCC
Q psy3240 42 NSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPEAD-----KRGAEHTNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 42 gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~-----~~g~~~~sl~ell~~aDvVil~lPlt 107 (274)
+++|.|.| .|.||+.+++.|...|.++++.+++....... ...+...++.++++.+|+|+.+....
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~ 73 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAATR 73 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCCHHHHHHHTTTCSEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEccccHHHHHHhhcCCCEEEEccccC
Confidence 47899999 69999999999999999877777663222100 11112124667888999999887653
No 444
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.34 E-value=0.018 Score=53.08 Aligned_cols=93 Identities=16% Similarity=0.203 Sum_probs=63.6
Q ss_pred CCCEEEEEc-cChHHHHHHHHHcc-CCCeEEEEeCCCCChh-HhhcCCccc-----CHHHHhc-----ccCEEEEcCCCC
Q psy3240 41 QNSTVGIVG-CGRIGLSVLEKLIP-YKVSKFLYTSRSKKPE-ADKRGAEHT-----NIDDLCK-----QSDFIIITSALT 107 (274)
Q Consensus 41 ~gktVGIIG-lG~IG~~iA~~L~~-~G~~vv~~~~r~~~~~-a~~~g~~~~-----sl~ell~-----~aDvVil~lPlt 107 (274)
.|++|.|+| .|.+|...++.++. .|+++++.+.+..+.+ +++.|+..+ ++.+.+. ..|+|+-++...
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~ 250 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTD 250 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCch
Confidence 688999999 99999999999998 5887666655444444 667777532 3333332 578999877531
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCCCchhc
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSRGQLVD 138 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~RG~iVd 138 (274)
+ .+ ...++.++++..++.++....++
T Consensus 251 ~----~~-~~~~~~l~~~G~iv~~g~~~~~~ 276 (363)
T 4dvj_A 251 K----HA-AEIADLIAPQGRFCLIDDPSAFD 276 (363)
T ss_dssp H----HH-HHHHHHSCTTCEEEECSCCSSCC
T ss_pred h----hH-HHHHHHhcCCCEEEEECCCCccc
Confidence 1 12 35677789999999886443334
No 445
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=95.32 E-value=0.022 Score=51.69 Aligned_cols=95 Identities=20% Similarity=0.257 Sum_probs=55.2
Q ss_pred CEEEEEc-cChHHHHHHHHHccCCC--eEEEEeC--CCCChh--Hh---hc-----CCcc-cCHHHHhcccCEEEEcCCC
Q psy3240 43 STVGIVG-CGRIGLSVLEKLIPYKV--SKFLYTS--RSKKPE--AD---KR-----GAEH-TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 43 ktVGIIG-lG~IG~~iA~~L~~~G~--~vv~~~~--r~~~~~--a~---~~-----g~~~-~sl~ell~~aDvVil~lPl 106 (274)
++|+|+| .|.+|+.++..|...|. +.+.+|. ...+.. .. .. .... .+..+.++.||+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 4899999 99999999999976664 4555655 221111 00 00 1111 0235678999999999864
Q ss_pred Ccc---cHH-hc--c----H---HHHhcCCCCcEEEEcCCCchhcH
Q psy3240 107 TPD---THH-LI--N----R---ARLESMKPGAILINTSRGQLVDQ 139 (274)
Q Consensus 107 t~~---T~~-li--~----~---~~l~~mk~gailINv~RG~iVde 139 (274)
... ++. ++ | . +.+....|.+++++++ .++|.
T Consensus 81 ~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S--NPv~~ 124 (303)
T 1o6z_A 81 PRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS--NPVDL 124 (303)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC--SSHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC--ChHHH
Confidence 321 111 10 1 1 2334457889999974 44443
No 446
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.31 E-value=0.02 Score=53.46 Aligned_cols=65 Identities=12% Similarity=0.223 Sum_probs=40.8
Q ss_pred CEEEEEccChHHHHHHHHHccC----CCeEEEEeCCCCChhHhhc-CCcc-cCHHHHhccc-------------------
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY----KVSKFLYTSRSKKPEADKR-GAEH-TNIDDLCKQS------------------- 97 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~----G~~vv~~~~r~~~~~a~~~-g~~~-~sl~ell~~a------------------- 97 (274)
.+|||||+|.||+.+++.++.. +++++...++......... |+.. .+++++++..
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~~~~~ 84 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPK 84 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTCSS
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhhhccC
Confidence 4799999999999999999764 2555555543221111122 4433 3555555432
Q ss_pred -CEEEEcCCCC
Q psy3240 98 -DFIIITSALT 107 (274)
Q Consensus 98 -DvVil~lPlt 107 (274)
|+|+.|+|..
T Consensus 85 ~DvVV~~t~~~ 95 (358)
T 1ebf_A 85 PVILVDNTSSA 95 (358)
T ss_dssp CEEEEECSCCH
T ss_pred CcEEEEcCCCh
Confidence 7999999864
No 447
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=95.30 E-value=0.033 Score=52.67 Aligned_cols=103 Identities=7% Similarity=0.022 Sum_probs=73.0
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHHh-
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARLE- 120 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~- 120 (274)
-.++.|+|.|.+|+++|+.++.+|++++++|+|..... .+-+..+|-++...|. ..+.. +.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~-----------~~~fp~a~~~~~~~p~-----~~~~~--~~~ 265 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFAT-----------TARFPTADEVVVDWPH-----RYLAA--QAE 265 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSC-----------TTTCSSSSEEEESCHH-----HHHHH--HHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhcc-----------cccCCCceEEEeCChH-----HHHHh--hcc
Confidence 45899999999999999999999999999998865211 1223456655554441 11111 11
Q ss_pred --cCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhccccc
Q psy3240 121 --SMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKH 162 (274)
Q Consensus 121 --~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~ 162 (274)
.+.+++.+|=+.++.-.|...|...|+.....||.+....++
T Consensus 266 ~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG~iGSrrk 309 (386)
T 2we8_A 266 AGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIGAMGSRRT 309 (386)
T ss_dssp HTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEEECCCHHH
T ss_pred ccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEEEecChhH
Confidence 267888999999998899999999887643677776665544
No 448
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=95.28 E-value=0.017 Score=56.01 Aligned_cols=66 Identities=14% Similarity=0.257 Sum_probs=42.7
Q ss_pred CCCEEEEEccChH-HHHHHHHHccC-----CCeEEEEeCCCCChhH---------hhcCC----cc-cCHHHHhcccCEE
Q psy3240 41 QNSTVGIVGCGRI-GLSVLEKLIPY-----KVSKFLYTSRSKKPEA---------DKRGA----EH-TNIDDLCKQSDFI 100 (274)
Q Consensus 41 ~gktVGIIGlG~I-G~~iA~~L~~~-----G~~vv~~~~r~~~~~a---------~~~g~----~~-~sl~ell~~aDvV 100 (274)
+.++|+|||.|.. |.++|..|... +.+++.||....+.+. ...+. .. .++++.++.||+|
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~V 106 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV 106 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEE
Confidence 3569999999998 66676655433 4456666654432110 11121 12 2788899999999
Q ss_pred EEcCCC
Q psy3240 101 IITSAL 106 (274)
Q Consensus 101 il~lPl 106 (274)
++++|.
T Consensus 107 Viaag~ 112 (472)
T 1u8x_X 107 MAHIRV 112 (472)
T ss_dssp EECCCT
T ss_pred EEcCCC
Confidence 999986
No 449
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.27 E-value=0.042 Score=50.24 Aligned_cols=89 Identities=17% Similarity=0.156 Sum_probs=59.8
Q ss_pred CCCEEEEEccChHHHHHHHHHccCCCe-EEEEeCCCCChh-HhhcCCc---c-------cCHHHHh------cccCEEEE
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPYKVS-KFLYTSRSKKPE-ADKRGAE---H-------TNIDDLC------KQSDFIII 102 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~G~~-vv~~~~r~~~~~-a~~~g~~---~-------~sl~ell------~~aDvVil 102 (274)
.|++|.|+|.|.+|...++.++.+|++ +++.+.+..+.+ +++.+.. + .++.+.+ ...|+|+-
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 588999999999999999999999997 555555444433 4444211 1 1122222 24899999
Q ss_pred cCCCCcccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 103 TSALTPDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 103 ~lPlt~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
++..... + ...++.++++..++.++..
T Consensus 259 ~~g~~~~----~-~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 259 CTGVESS----I-AAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp CSCCHHH----H-HHHHHHSCTTCEEEECCCC
T ss_pred CCCChHH----H-HHHHHHhcCCCEEEEEccC
Confidence 8864211 1 3567778999999998753
No 450
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.27 E-value=0.037 Score=48.53 Aligned_cols=74 Identities=19% Similarity=0.281 Sum_probs=50.1
Q ss_pred CCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCC-C--Ch-h-H------hhcCCcc--------cCHHHHhcccCEEE
Q psy3240 42 NSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRS-K--KP-E-A------DKRGAEH--------TNIDDLCKQSDFII 101 (274)
Q Consensus 42 gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~-~--~~-~-a------~~~g~~~--------~sl~ell~~aDvVi 101 (274)
+++|.|.|. |.||+.+++.|...|.++++.+++. . .+ . . ...++.. .++.++++.+|+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999996 9999999999998898777777654 1 11 1 1 1234432 14567788999999
Q ss_pred EcCCCC--cccHHhcc
Q psy3240 102 ITSALT--PDTHHLIN 115 (274)
Q Consensus 102 l~lPlt--~~T~~li~ 115 (274)
.+.+.. ..+..+++
T Consensus 82 ~~a~~~~~~~~~~l~~ 97 (307)
T 2gas_A 82 CAAGRLLIEDQVKIIK 97 (307)
T ss_dssp ECSSSSCGGGHHHHHH
T ss_pred ECCcccccccHHHHHH
Confidence 988753 23444443
No 451
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=95.24 E-value=0.055 Score=49.24 Aligned_cols=63 Identities=19% Similarity=0.169 Sum_probs=45.3
Q ss_pred CEEEEEc-cChHHHHHHHHHc-cCCCeEEEEeCCCCChh----H-h-----hcCCccc-CHHHHhcccCEEEEcCC
Q psy3240 43 STVGIVG-CGRIGLSVLEKLI-PYKVSKFLYTSRSKKPE----A-D-----KRGAEHT-NIDDLCKQSDFIIITSA 105 (274)
Q Consensus 43 ktVGIIG-lG~IG~~iA~~L~-~~G~~vv~~~~r~~~~~----a-~-----~~g~~~~-sl~ell~~aDvVil~lP 105 (274)
.+|+|+| +|+||+.+++.+. .-+++.+...++..... + . ..|+... ++++++..+|+|+-..+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~ 97 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ 97 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC
Confidence 5899999 9999999999986 45787676655543210 1 1 2344433 89999999999997664
No 452
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=95.24 E-value=0.069 Score=48.73 Aligned_cols=87 Identities=6% Similarity=-0.017 Sum_probs=61.6
Q ss_pred CC-CEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCC----hh-HhhcCCccc-CHH--------HHh--------cc
Q psy3240 41 QN-STVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKK----PE-ADKRGAEHT-NID--------DLC--------KQ 96 (274)
Q Consensus 41 ~g-ktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~----~~-a~~~g~~~~-sl~--------ell--------~~ 96 (274)
.| .+|.|+|. |.+|...++.++.+|+++++..+...+ .. +++.|+..+ +.. +.+ ..
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g 245 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE 245 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCC
Confidence 47 89999998 999999999999999987777654443 22 556776532 221 112 24
Q ss_pred cCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 97 SDFIIITSALTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 97 aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+|+|+-++.. +. .. ..++.++++..++.++.
T Consensus 246 ~Dvvid~~G~-~~---~~--~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 246 AKLALNCVGG-KS---ST--GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp EEEEEESSCH-HH---HH--HHHHTSCTTCEEEECCC
T ss_pred ceEEEECCCc-hh---HH--HHHHHhccCCEEEEecC
Confidence 7999998863 11 22 56788999999999874
No 453
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.24 E-value=0.057 Score=51.77 Aligned_cols=87 Identities=15% Similarity=0.293 Sum_probs=62.8
Q ss_pred CCCCCEEEEEccC----------hHHHHHHHHHccC-CCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCC
Q psy3240 39 ALQNSTVGIVGCG----------RIGLSVLEKLIPY-KVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 39 ~L~gktVGIIGlG----------~IG~~iA~~L~~~-G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt 107 (274)
.+.|++|+|+|+- .-...+++.|... |+++.+||+..... ....++++.++.+|+|+++++-.
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~------~~~~~~~~~~~~ad~vvi~t~~~ 385 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD------FVEHDMSHAVKDASLVLILSDHS 385 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT------TBCSTTHHHHTTCSEEEECSCCG
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc------cccCCHHHHHhCCCEEEEecCCH
Confidence 4789999999974 3478999999998 99888888765431 22347899999999999988743
Q ss_pred cccHHhccHHHHhcCCCCcEEEEcCCCc
Q psy3240 108 PDTHHLINRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 108 ~~T~~li~~~~l~~mk~gailINv~RG~ 135 (274)
+-+. ++.+.++.|+ +.+++|+ |+-
T Consensus 386 -~f~~-~d~~~~~~~~-~~~i~D~-r~~ 409 (431)
T 3ojo_A 386 -EFKN-LSDSHFDKMK-HKVIFDT-KNV 409 (431)
T ss_dssp -GGTS-CCGGGGTTCS-SCEEEES-SCC
T ss_pred -HHhc-cCHHHHHhCC-CCEEEEC-CCC
Confidence 3222 2334456676 6789996 543
No 454
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=95.22 E-value=0.076 Score=48.53 Aligned_cols=86 Identities=13% Similarity=0.188 Sum_probs=61.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCC----hh-HhhcCCccc-CHH--------HHhc---ccCEEEE
Q psy3240 41 QNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKK----PE-ADKRGAEHT-NID--------DLCK---QSDFIII 102 (274)
Q Consensus 41 ~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~----~~-a~~~g~~~~-sl~--------ell~---~aDvVil 102 (274)
.|.+|.|+|. |.+|...++.++.+|+++++..++..+ .+ +++.|+..+ +.. ++.. ..|+|+-
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid 246 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALN 246 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEE
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEE
Confidence 5889999998 999999999999999987776655433 12 556777532 221 2222 3799999
Q ss_pred cCCCCcccHHhccHHHHhcCCCCcEEEEcC
Q psy3240 103 TSALTPDTHHLINRARLESMKPGAILINTS 132 (274)
Q Consensus 103 ~lPlt~~T~~li~~~~l~~mk~gailINv~ 132 (274)
++.. +.+ .+.++.++++..++.++
T Consensus 247 ~~g~-~~~-----~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 247 CVGG-KSS-----TELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSCH-HHH-----HHHHTTSCTTCEEEECC
T ss_pred CCCc-HHH-----HHHHHhhCCCCEEEEEe
Confidence 8752 222 24688899999999886
No 455
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.22 E-value=0.024 Score=51.76 Aligned_cols=87 Identities=13% Similarity=0.070 Sum_probs=60.2
Q ss_pred CC--CEEEEEcc-ChHHHHHHHHHccCCC-eEEEEeCCCCChh-Hhh-cCCccc------CHHHHhc-----ccCEEEEc
Q psy3240 41 QN--STVGIVGC-GRIGLSVLEKLIPYKV-SKFLYTSRSKKPE-ADK-RGAEHT------NIDDLCK-----QSDFIIIT 103 (274)
Q Consensus 41 ~g--ktVGIIGl-G~IG~~iA~~L~~~G~-~vv~~~~r~~~~~-a~~-~g~~~~------sl~ell~-----~aDvVil~ 103 (274)
.| ++|.|.|. |.||..+++.++..|+ ++++.+++..+.. ..+ .|+... +..+.+. ..|+|+.+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~ 237 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDN 237 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEEC
Confidence 46 99999998 9999999999999999 7777765543333 333 565321 2333222 37899887
Q ss_pred CCCCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 104 SALTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 104 lPlt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+.. . .-...++.++++..++.++.
T Consensus 238 ~G~-----~-~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 238 VGG-----N-ISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp CCH-----H-HHHHHHHTEEEEEEEEECCC
T ss_pred CCH-----H-HHHHHHHHhccCcEEEEECC
Confidence 752 1 12456778888888888875
No 456
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=95.21 E-value=0.042 Score=48.15 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcc---ChHHHHHHHHHccCCCeEEEEeCCCC
Q psy3240 39 ALQNSTVGIVGC---GRIGLSVLEKLIPYKVSKFLYTSRSK 76 (274)
Q Consensus 39 ~L~gktVGIIGl---G~IG~~iA~~L~~~G~~vv~~~~r~~ 76 (274)
.+.||++.|.|. |.||+.+|+.|...|+++++.+++..
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 43 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 478999999997 69999999999999998777776543
No 457
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.21 E-value=0.028 Score=52.03 Aligned_cols=86 Identities=15% Similarity=0.153 Sum_probs=52.0
Q ss_pred CEEEEEccChHHHHHHHHHcc-CCCeEEEEeCC-CCChh-H--hh-------cC-C---------------c-c--cCHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIP-YKVSKFLYTSR-SKKPE-A--DK-------RG-A---------------E-H--TNID 91 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~-~G~~vv~~~~r-~~~~~-a--~~-------~g-~---------------~-~--~sl~ 91 (274)
.+|||+|+|.||+.+++.|.. -+++++...++ ..... + .+ +. . . . .+++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 489999999999999999864 45776666653 22111 0 00 00 0 0 0 1455
Q ss_pred HH-h--cccCEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 92 DL-C--KQSDFIIITSALTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 92 el-l--~~aDvVil~lPlt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
++ + ..+|+|+.|+|.....+ ..-..++.|+..|+++-
T Consensus 84 ~l~~~~~~vDvV~eatg~~~~~e-----~a~~~l~aGak~V~iSa 123 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFTTME-----KAGAHLQGGAKRVIISA 123 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCCSHH-----HHGGGGGGTCSEEEESS
T ss_pred HCccccCCCCEEEECCCchhhHH-----HHHHHHhCCCeEEEecc
Confidence 55 2 57999999999643322 22334567766666654
No 458
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.18 E-value=0.075 Score=47.05 Aligned_cols=74 Identities=22% Similarity=0.342 Sum_probs=51.2
Q ss_pred CCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCC-Chh-H---hhcCCcc--------cCHHHHhcccCEEEEcCCCC
Q psy3240 42 NSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSK-KPE-A---DKRGAEH--------TNIDDLCKQSDFIIITSALT 107 (274)
Q Consensus 42 gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~-~~~-a---~~~g~~~--------~sl~ell~~aDvVil~lPlt 107 (274)
.++|.|.|. |.||+.+++.|...|.++++.+++.. ... . ...+++. .++.++++.+|+|+.+.+..
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~ 90 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP 90 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence 368999995 99999999999999998877776653 221 1 2234432 14567888999999887643
Q ss_pred --cccHHhcc
Q psy3240 108 --PDTHHLIN 115 (274)
Q Consensus 108 --~~T~~li~ 115 (274)
..++.+++
T Consensus 91 ~~~~~~~l~~ 100 (318)
T 2r6j_A 91 QILDQFKILE 100 (318)
T ss_dssp GSTTHHHHHH
T ss_pred hhHHHHHHHH
Confidence 23455554
No 459
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.18 E-value=0.018 Score=49.96 Aligned_cols=89 Identities=18% Similarity=0.275 Sum_probs=53.9
Q ss_pred EEEEEcc-ChHHHHHHHHHccC--CCeEEEEeCCCCChh-HhhcCCcc--------cCHHHHhcccCEEEEcCCCC----
Q psy3240 44 TVGIVGC-GRIGLSVLEKLIPY--KVSKFLYTSRSKKPE-ADKRGAEH--------TNIDDLCKQSDFIIITSALT---- 107 (274)
Q Consensus 44 tVGIIGl-G~IG~~iA~~L~~~--G~~vv~~~~r~~~~~-a~~~g~~~--------~sl~ell~~aDvVil~lPlt---- 107 (274)
+|.|.|. |.||+.+++.|... |.++++.+++..+.. ....++.. .++.++++.+|+|+.+....
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQR 80 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHH
Confidence 4788986 99999999999987 888888776544332 22223321 14567888999999876542
Q ss_pred -cccHHhccHHHHhcCCCCcEEEEcCCCc
Q psy3240 108 -PDTHHLINRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 108 -~~T~~li~~~~l~~mk~gailINv~RG~ 135 (274)
..++.++..-.-. + -..+|.+|+..
T Consensus 81 ~~~~~~l~~a~~~~--~-~~~~v~~Ss~~ 106 (286)
T 2zcu_A 81 APQHRNVINAAKAA--G-VKFIAYTSLLH 106 (286)
T ss_dssp -CHHHHHHHHHHHH--T-CCEEEEEEETT
T ss_pred HHHHHHHHHHHHHc--C-CCEEEEECCCC
Confidence 1233333221111 1 23677777644
No 460
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.17 E-value=0.018 Score=57.45 Aligned_cols=35 Identities=29% Similarity=0.525 Sum_probs=29.4
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeEEEEe
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFLYT 72 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~ 72 (274)
..|++++|.|||+|.+|..+|+.|...|...+...
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLv 357 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFV 357 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 34678999999999999999999999998655443
No 461
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=95.15 E-value=0.1 Score=45.48 Aligned_cols=37 Identities=22% Similarity=0.143 Sum_probs=32.4
Q ss_pred CCCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCC
Q psy3240 38 PALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSR 74 (274)
Q Consensus 38 ~~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r 74 (274)
.++.||++.|.|. |-||+++|+.|...|+++++.+++
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 4699999999995 789999999999999988777654
No 462
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=95.12 E-value=0.021 Score=49.71 Aligned_cols=38 Identities=16% Similarity=0.182 Sum_probs=32.6
Q ss_pred CCCCCCEEEEEcc---ChHHHHHHHHHccCCCeEEEEeCCC
Q psy3240 38 PALQNSTVGIVGC---GRIGLSVLEKLIPYKVSKFLYTSRS 75 (274)
Q Consensus 38 ~~L~gktVGIIGl---G~IG~~iA~~L~~~G~~vv~~~~r~ 75 (274)
..+.||++.|.|. |.||+.+|+.|...|+++++.+++.
T Consensus 4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4688999999997 6999999999999999877776554
No 463
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=95.12 E-value=0.052 Score=49.68 Aligned_cols=96 Identities=15% Similarity=0.183 Sum_probs=58.6
Q ss_pred CCEEEEEcc-ChHHHHHHHHHccCCC-------eEEEEeCC----CCChh--H--hhcC---C----c-ccCHHHHhccc
Q psy3240 42 NSTVGIVGC-GRIGLSVLEKLIPYKV-------SKFLYTSR----SKKPE--A--DKRG---A----E-HTNIDDLCKQS 97 (274)
Q Consensus 42 gktVGIIGl-G~IG~~iA~~L~~~G~-------~vv~~~~r----~~~~~--a--~~~g---~----~-~~sl~ell~~a 97 (274)
.++|+|+|. |.+|+.++..|...|. +++.+|.. ..+.. + .... . . ..++.+.++.|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 368999997 9999999999987665 56666654 11111 0 1111 1 1 13678899999
Q ss_pred CEEEEcCCCCcc---cHH-hc--c----H---HHHhcC-CCCcEEEEcCCCchhcH
Q psy3240 98 DFIIITSALTPD---THH-LI--N----R---ARLESM-KPGAILINTSRGQLVDQ 139 (274)
Q Consensus 98 DvVil~lPlt~~---T~~-li--~----~---~~l~~m-k~gailINv~RG~iVde 139 (274)
|+|+.+...... ++. ++ | . +.+... +|.+++|+++ .++|.
T Consensus 85 D~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S--NPv~~ 138 (329)
T 1b8p_A 85 DVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG--NPANT 138 (329)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS--SSHHH
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc--CchHH
Confidence 999988753321 111 11 1 1 123333 4889999997 44543
No 464
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.09 E-value=0.021 Score=51.63 Aligned_cols=87 Identities=18% Similarity=0.212 Sum_probs=59.1
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHH----h--cccCEEEEcCCC
Q psy3240 41 QNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDL----C--KQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~el----l--~~aDvVil~lPl 106 (274)
.|++|.|.|. |.||..+++.++..|+++++.+++..+.+ +.+.|.... +..+. . ...|+|+.++..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK 224 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcH
Confidence 5889999995 99999999999999997777665443333 444554321 22221 1 247888888764
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+. -...++.++++..++.++.
T Consensus 225 -~~-----~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 225 -DT-----LQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp -TT-----HHHHHHTEEEEEEEEECCC
T ss_pred -HH-----HHHHHHhhccCCEEEEEec
Confidence 11 2456777888888888874
No 465
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.07 E-value=0.035 Score=51.55 Aligned_cols=31 Identities=29% Similarity=0.371 Sum_probs=25.4
Q ss_pred CEEEEEccChHHHHHHHHHccC-CCeEEEEeC
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPY-KVSKFLYTS 73 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~ 73 (274)
.+|||+|+|.||+.+++.|... +++++...+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d 35 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVND 35 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEEC
Confidence 4899999999999999998764 566666655
No 466
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=95.04 E-value=0.031 Score=48.46 Aligned_cols=97 Identities=9% Similarity=0.139 Sum_probs=58.3
Q ss_pred CCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCccc---CHHHHhc-------ccCEEEEcCCCC
Q psy3240 39 ALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHT---NIDDLCK-------QSDFIIITSALT 107 (274)
Q Consensus 39 ~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~---sl~ell~-------~aDvVil~lPlt 107 (274)
+-.+|++.|.|. |.||+++|+.|...|+++++.+++..+.......+... +++++++ ..|+|+.+.-..
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~ 98 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGW 98 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCC
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 344789999995 78999999999999998777776554332111111111 3334443 349998876531
Q ss_pred -------cccH----Hh----------ccHHHHhcCCCCcEEEEcCCCc
Q psy3240 108 -------PDTH----HL----------INRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 108 -------~~T~----~l----------i~~~~l~~mk~gailINv~RG~ 135 (274)
+.+. .+ +.+..++.|+++..+|++++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 147 (251)
T 3orf_A 99 SGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA 147 (251)
T ss_dssp CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred CCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence 1111 11 1233456677777899998744
No 467
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=95.03 E-value=0.035 Score=49.91 Aligned_cols=98 Identities=17% Similarity=0.261 Sum_probs=61.6
Q ss_pred CCCCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh--HhhcCCc-------ccC---HHHH-------hcc
Q psy3240 37 GPALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRGAE-------HTN---IDDL-------CKQ 96 (274)
Q Consensus 37 g~~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g~~-------~~s---l~el-------l~~ 96 (274)
.+.|+||++.|-|. +-||+++|+.|...|+++++.+++....+ ..+.+.. ..+ .+++ +..
T Consensus 24 s~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 24 TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp -CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 35699999999986 57999999999999998777776543322 2232221 111 2222 334
Q ss_pred cCEEEEcCCCCc------ccHH----hc----------cHHHHhcCCCCcEEEEcCCC
Q psy3240 97 SDFIIITSALTP------DTHH----LI----------NRARLESMKPGAILINTSRG 134 (274)
Q Consensus 97 aDvVil~lPlt~------~T~~----li----------~~~~l~~mk~gailINv~RG 134 (274)
-|+++...-..+ .+.. ++ .+..++.|+++.-+||+++.
T Consensus 104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~ 161 (273)
T 4fgs_A 104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST 161 (273)
T ss_dssp EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence 699988763321 1111 11 23457788888889998863
No 468
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.02 E-value=0.044 Score=46.23 Aligned_cols=67 Identities=22% Similarity=0.186 Sum_probs=46.1
Q ss_pred CCCCEEEEEc-cChHHHHHHHHHccC--CCeEEEEeCCCCChhHhhcCCcc--------cCHHHHhcccCEEEEcCCC
Q psy3240 40 LQNSTVGIVG-CGRIGLSVLEKLIPY--KVSKFLYTSRSKKPEADKRGAEH--------TNIDDLCKQSDFIIITSAL 106 (274)
Q Consensus 40 L~gktVGIIG-lG~IG~~iA~~L~~~--G~~vv~~~~r~~~~~a~~~g~~~--------~sl~ell~~aDvVil~lPl 106 (274)
..+++|.|.| .|.||+.+++.|... |.++++.+++..+......++.. .+++++++.+|+|+.+...
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 3578999999 699999999999988 78777766543221111112211 1456778899999988754
No 469
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.00 E-value=0.03 Score=53.90 Aligned_cols=65 Identities=14% Similarity=0.274 Sum_probs=47.9
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChh--HhhcCCcc-----c---CHHHH-hcccCEEEEcCCC
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPE--ADKRGAEH-----T---NIDDL-CKQSDFIIITSAL 106 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~--a~~~g~~~-----~---sl~el-l~~aDvVil~lPl 106 (274)
.++|-|+|+|.+|+.+|+.|...|..+++.+....... ....++.. . .|+++ +++||+++.+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence 46899999999999999999999998888887654433 23445432 1 24443 6789999887765
No 470
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=94.99 E-value=0.08 Score=46.80 Aligned_cols=69 Identities=16% Similarity=0.131 Sum_probs=47.4
Q ss_pred CCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-Hhh-------cCC------c---ccCHHHHhcccCEE
Q psy3240 39 ALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADK-------RGA------E---HTNIDDLCKQSDFI 100 (274)
Q Consensus 39 ~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~-------~g~------~---~~sl~ell~~aDvV 100 (274)
.+.+++|.|.|. |.||+.+++.|...|.++++.+++..... ... .++ . ..+++++++.+|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 478899999997 99999999999999997777765432211 100 111 1 11455677789999
Q ss_pred EEcCCCC
Q psy3240 101 IITSALT 107 (274)
Q Consensus 101 il~lPlt 107 (274)
+.+....
T Consensus 88 ih~A~~~ 94 (342)
T 1y1p_A 88 AHIASVV 94 (342)
T ss_dssp EECCCCC
T ss_pred EEeCCCC
Confidence 9877543
No 471
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.98 E-value=0.023 Score=52.10 Aligned_cols=87 Identities=11% Similarity=0.066 Sum_probs=59.6
Q ss_pred CCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHh------cccCEEEEcCCC
Q psy3240 41 QNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLC------KQSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell------~~aDvVil~lPl 106 (274)
.|++|.|.| .|.||..+++.++..|+++++.+.+..+.+ +.+.|+... +..+.+ ...|+|+.++..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGG 241 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCG
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCc
Confidence 589999999 799999999999999997777665443333 444555321 222222 247999988753
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~R 133 (274)
+. + ...++.|+++..++.++.
T Consensus 242 -~~----~-~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 242 -SY----W-EKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp -GG----H-HHHHHHEEEEEEEEECCC
T ss_pred -hH----H-HHHHHhccCCCEEEEEec
Confidence 11 2 345777888889988874
No 472
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=94.97 E-value=0.033 Score=43.81 Aligned_cols=67 Identities=16% Similarity=0.252 Sum_probs=44.6
Q ss_pred CCCEEEEEccChHHHHHHHHHccC-CCeEEEEeCCCCChh-HhhcCCcc---cCHHHHhc--ccCEEEEcCCCC
Q psy3240 41 QNSTVGIVGCGRIGLSVLEKLIPY-KVSKFLYTSRSKKPE-ADKRGAEH---TNIDDLCK--QSDFIIITSALT 107 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~iA~~L~~~-G~~vv~~~~r~~~~~-a~~~g~~~---~sl~ell~--~aDvVil~lPlt 107 (274)
..+++.|+|.|..|+.+++.++.. |++++++.+...... ..-.|+.. .++.++++ ..|.|++++|..
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEECCTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEeCCCC
Confidence 356899999999999999999754 787777765443221 11123322 24555554 478899999864
No 473
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.95 E-value=0.045 Score=52.93 Aligned_cols=111 Identities=15% Similarity=0.209 Sum_probs=70.2
Q ss_pred CCCEEEEEccChHHHH-HHHHHccCCCeEEEEeCCCCChh--HhhcCCccc--CHHHHhcccCEEEEcCCCCcccHH---
Q psy3240 41 QNSTVGIVGCGRIGLS-VLEKLIPYKVSKFLYTSRSKKPE--ADKRGAEHT--NIDDLCKQSDFIIITSALTPDTHH--- 112 (274)
Q Consensus 41 ~gktVGIIGlG~IG~~-iA~~L~~~G~~vv~~~~r~~~~~--a~~~g~~~~--sl~ell~~aDvVil~lPlt~~T~~--- 112 (274)
..|+|.|||+|.+|.+ +|+.|+..|+++.++|.+..... ..+.|+... .-.+.+..+|+|+..--..+....
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~ 100 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVA 100 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHH
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHH
Confidence 3589999999999996 89999999998888776543222 345677543 223346779999885222222211
Q ss_pred -------hcc-HHHHhc-CCCC-cEEEEcCCCchhcHHHHHhhhhhhhh
Q psy3240 113 -------LIN-RARLES-MKPG-AILINTSRGQLVDQEALIDFIADIRV 151 (274)
Q Consensus 113 -------li~-~~~l~~-mk~g-ailINv~RG~iVde~aL~~~L~~~~i 151 (274)
++. .+++.. ++.. .+-|--+.|+.--..-+...|+..|.
T Consensus 101 a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 149 (494)
T 4hv4_A 101 AREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGL 149 (494)
T ss_dssp HHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTC
T ss_pred HHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 222 233433 3322 34455567888888888888887764
No 474
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=94.94 E-value=0.036 Score=55.52 Aligned_cols=35 Identities=29% Similarity=0.482 Sum_probs=29.8
Q ss_pred CCCCCEEEEEccChHHHHHHHHHccCCCeEEE-EeC
Q psy3240 39 ALQNSTVGIVGCGRIGLSVLEKLIPYKVSKFL-YTS 73 (274)
Q Consensus 39 ~L~gktVGIIGlG~IG~~iA~~L~~~G~~vv~-~~~ 73 (274)
.|++++|.|||+|.+|..+|+.|...|...+. +|.
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~ 358 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDN 358 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 47889999999999999999999999986554 444
No 475
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=94.92 E-value=0.065 Score=47.74 Aligned_cols=98 Identities=13% Similarity=0.167 Sum_probs=60.8
Q ss_pred CCCCCCEEEEEcc-Ch--HHHHHHHHHccCCCeEEEEeCCCCChh-H----hhcC-C-----ccc---CHHHHhc-----
Q psy3240 38 PALQNSTVGIVGC-GR--IGLSVLEKLIPYKVSKFLYTSRSKKPE-A----DKRG-A-----EHT---NIDDLCK----- 95 (274)
Q Consensus 38 ~~L~gktVGIIGl-G~--IG~~iA~~L~~~G~~vv~~~~r~~~~~-a----~~~g-~-----~~~---sl~ell~----- 95 (274)
..+.||++.|.|. |. ||+++|+.|...|+++++.+++....+ . ...+ + ... +++++++
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence 4689999999997 45 999999999999998777665422111 1 1111 1 111 2333333
Q ss_pred --ccCEEEEcCCCCc----------ccHH----h----------ccHHHHhcCCCCcEEEEcCCCc
Q psy3240 96 --QSDFIIITSALTP----------DTHH----L----------INRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 96 --~aDvVil~lPlt~----------~T~~----l----------i~~~~l~~mk~gailINv~RG~ 135 (274)
..|+++.+.-... .+.. + +.+..++.|+++..+||+++..
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~ 172 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYG 172 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGG
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehh
Confidence 5799998775432 1110 1 1234566788888999998743
No 476
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=94.91 E-value=0.09 Score=46.24 Aligned_cols=37 Identities=11% Similarity=0.079 Sum_probs=32.1
Q ss_pred CCCCCEEEEEcc---ChHHHHHHHHHccCCCeEEEEeCCC
Q psy3240 39 ALQNSTVGIVGC---GRIGLSVLEKLIPYKVSKFLYTSRS 75 (274)
Q Consensus 39 ~L~gktVGIIGl---G~IG~~iA~~L~~~G~~vv~~~~r~ 75 (274)
.+.||++.|.|. |.||+++|+.|...|+++++.+++.
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 57 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATP 57 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH
Confidence 489999999997 6999999999999999877776554
No 477
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=94.90 E-value=0.099 Score=47.97 Aligned_cols=95 Identities=18% Similarity=0.289 Sum_probs=67.1
Q ss_pred CCCCCEEEEEcc---ChHHHHHHHHHccC-CCeEEEEeCCCCC--hh----HhhcCCcc---cCHHHHhcccCEEEEcCC
Q psy3240 39 ALQNSTVGIVGC---GRIGLSVLEKLIPY-KVSKFLYTSRSKK--PE----ADKRGAEH---TNIDDLCKQSDFIIITSA 105 (274)
Q Consensus 39 ~L~gktVGIIGl---G~IG~~iA~~L~~~-G~~vv~~~~r~~~--~~----a~~~g~~~---~sl~ell~~aDvVil~lP 105 (274)
.+.|++|++||= |++..+++..+..+ |+++.+..+..-. +. +.+.|... .+++|+++.+|+|....-
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~ 227 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRI 227 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCc
Confidence 589999999996 58999999999999 9977666654322 11 23445543 489999999999997432
Q ss_pred ------CCccc-----HHhccHHHHhcCCCCcEEEEcC-CCc
Q psy3240 106 ------LTPDT-----HHLINRARLESMKPGAILINTS-RGQ 135 (274)
Q Consensus 106 ------lt~~T-----~~li~~~~l~~mk~gailINv~-RG~ 135 (274)
...+- ..-++.+.++. ++++|.-+. ||.
T Consensus 228 q~er~~~~~e~~~~~~~y~v~~~~l~~--~~ai~mH~lPRg~ 267 (306)
T 4ekn_B 228 QKERFPDPNEYEKVKGSYKIKREYVEG--KKFIIMHPLPRVD 267 (306)
T ss_dssp CGGGCCSHHHHHHHHHHHCBCHHHHTT--CCCEEECCSCCSS
T ss_pred ccccCCCHHHHHHhccCcEECHHHHcC--CCCEEECCCCCCC
Confidence 11111 13367788876 888888775 553
No 478
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.90 E-value=0.018 Score=51.66 Aligned_cols=86 Identities=16% Similarity=0.136 Sum_probs=60.8
Q ss_pred CCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHH--h-----cccCEEEEcCCCCcccH
Q psy3240 42 NSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDL--C-----KQSDFIIITSALTPDTH 111 (274)
Q Consensus 42 gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~el--l-----~~aDvVil~lPlt~~T~ 111 (274)
|+ |.|+|. |.+|...++.++..|+++++.+.+..+.+ +++.|+..+ +..+. + ...|+|+-++.. +
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~-~--- 222 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGD-K--- 222 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCH-H---
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCc-H---
Confidence 45 999998 99999999999999998777776655555 666776532 22111 1 246888887642 1
Q ss_pred HhccHHHHhcCCCCcEEEEcCCC
Q psy3240 112 HLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~RG 134 (274)
.-...++.++++..++.++..
T Consensus 223 --~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 223 --VLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp --HHHHHHHTEEEEEEEEECCCT
T ss_pred --HHHHHHHHHhcCCEEEEEecC
Confidence 234667888999999998753
No 479
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=94.89 E-value=0.051 Score=51.33 Aligned_cols=91 Identities=12% Similarity=0.172 Sum_probs=51.9
Q ss_pred CCCCCCEEEEEc-cChHHHHHHHHHccCCC-eEEE-E-eCCCCChh-Hhh-------------cCCccc--CHHHHhccc
Q psy3240 38 PALQNSTVGIVG-CGRIGLSVLEKLIPYKV-SKFL-Y-TSRSKKPE-ADK-------------RGAEHT--NIDDLCKQS 97 (274)
Q Consensus 38 ~~L~gktVGIIG-lG~IG~~iA~~L~~~G~-~vv~-~-~~r~~~~~-a~~-------------~g~~~~--sl~ell~~a 97 (274)
......+||||| .|..|+.+.+.|...-. +... + .+++.-.. ... ...... +.++.+.++
T Consensus 15 ~~M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~~~~ 94 (381)
T 3hsk_A 15 SHMSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFLEC 94 (381)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTGGGC
T ss_pred ccCCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhcccC
Confidence 445557899999 69999999999987543 3322 2 23322211 110 111111 222256889
Q ss_pred CEEEEcCCCCcccHHhccHHHHhcCCCCcEEEEcCC
Q psy3240 98 DFIIITSALTPDTHHLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 98 DvVil~lPlt~~T~~li~~~~l~~mk~gailINv~R 133 (274)
|+|++|+|... ++.+. .+. .+.|+.+||.|.
T Consensus 95 Dvvf~alp~~~-s~~~~-~~~---~~~G~~VIDlSa 125 (381)
T 3hsk_A 95 DVVFSGLDADV-AGDIE-KSF---VEAGLAVVSNAK 125 (381)
T ss_dssp SEEEECCCHHH-HHHHH-HHH---HHTTCEEEECCS
T ss_pred CEEEECCChhH-HHHHH-HHH---HhCCCEEEEcCC
Confidence 99999999532 22222 122 357899999884
No 480
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.89 E-value=0.031 Score=51.21 Aligned_cols=88 Identities=19% Similarity=0.189 Sum_probs=59.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc------CHHHHh----c--ccCEEEEcCCC
Q psy3240 41 QNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT------NIDDLC----K--QSDFIIITSAL 106 (274)
Q Consensus 41 ~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~------sl~ell----~--~aDvVil~lPl 106 (274)
.|++|.|.|. |.||..+++.++..|+++++.+.+..+.+ +.+.|+... ++.+.+ . ..|+|+.++..
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~ 249 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLAN 249 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCCh
Confidence 5899999998 99999999999999997776665443333 455565321 222221 1 47888887642
Q ss_pred CcccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 107 TPDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 107 t~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
+ .+ ...++.++++..++.++..
T Consensus 250 -~----~~-~~~~~~l~~~G~iv~~g~~ 271 (351)
T 1yb5_A 250 -V----NL-SKDLSLLSHGGRVIVVGSR 271 (351)
T ss_dssp -H----HH-HHHHHHEEEEEEEEECCCC
T ss_pred -H----HH-HHHHHhccCCCEEEEEecC
Confidence 1 12 3457778888888888743
No 481
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.88 E-value=0.075 Score=51.23 Aligned_cols=103 Identities=15% Similarity=0.226 Sum_probs=69.4
Q ss_pred CCCCCCEEEEEccC----------hHHHHHHHHHccCCCeEEEEeCCCCChh----Hhh-c-------CCcc-cCHHHHh
Q psy3240 38 PALQNSTVGIVGCG----------RIGLSVLEKLIPYKVSKFLYTSRSKKPE----ADK-R-------GAEH-TNIDDLC 94 (274)
Q Consensus 38 ~~L~gktVGIIGlG----------~IG~~iA~~L~~~G~~vv~~~~r~~~~~----a~~-~-------g~~~-~sl~ell 94 (274)
..+.|++|+|+|+- .-...+++.|...|+++.+||+...... ... . .+.. .++.+.+
T Consensus 331 ~~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (481)
T 2o3j_A 331 NTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAA 410 (481)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHH
T ss_pred cccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHH
Confidence 35899999999974 5678999999999998888887654221 111 1 1233 3678899
Q ss_pred cccCEEEEcCCCCcccHHhccH-HHHhcCCCCcEEEEcCCCchhcHHHHHh
Q psy3240 95 KQSDFIIITSALTPDTHHLINR-ARLESMKPGAILINTSRGQLVDQEALID 144 (274)
Q Consensus 95 ~~aDvVil~lPlt~~T~~li~~-~~l~~mk~gailINv~RG~iVde~aL~~ 144 (274)
+.+|+|++++.-. +-+. ++. +..+.|+...+++|. |+- .|.+.+.+
T Consensus 411 ~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~~~~~i~D~-r~~-~~~~~~~~ 457 (481)
T 2o3j_A 411 RGAHAIVVLTEWD-EFVE-LNYSQIHNDMQHPAAIFDG-RLI-LDQKALRE 457 (481)
T ss_dssp TTCSEEEECSCCG-GGTT-SCHHHHHHHSCSSCEEEES-SSC-SCHHHHHH
T ss_pred cCCCEEEEcCCcH-Hhhc-cCHHHHHHhcCCCCEEEEC-CCC-CCHHHHHh
Confidence 9999999988753 3322 344 344567776688987 543 46555443
No 482
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.87 E-value=0.042 Score=50.07 Aligned_cols=98 Identities=20% Similarity=0.216 Sum_probs=58.1
Q ss_pred CEEEEEccChHHHHHHHHHccCCC--eEEEEeCCCCChh--Hhh-------cCC--cc--cCHHHHhcccCEEEEcCCC-
Q psy3240 43 STVGIVGCGRIGLSVLEKLIPYKV--SKFLYTSRSKKPE--ADK-------RGA--EH--TNIDDLCKQSDFIIITSAL- 106 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~~G~--~vv~~~~r~~~~~--a~~-------~g~--~~--~sl~ell~~aDvVil~lPl- 106 (274)
+||+|||.|.||+++|..|...+. +.+.+|....+.. +.+ .+. .. .+..+.++.||+|+++.-.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence 589999999999999998865443 4566765442222 111 111 11 1234678999999998742
Q ss_pred -Cc-ccHH-hc--cHH-------HHhcCCCCcEEEEcCCCchhcHHHH
Q psy3240 107 -TP-DTHH-LI--NRA-------RLESMKPGAILINTSRGQLVDQEAL 142 (274)
Q Consensus 107 -t~-~T~~-li--~~~-------~l~~mk~gailINv~RG~iVde~aL 142 (274)
.| .||. ++ |.+ .+.+-.|+++++.++ .++|.-..
T Consensus 81 rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs--NPvd~~t~ 126 (294)
T 2x0j_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTY 126 (294)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec--CcchhhHH
Confidence 22 2332 22 222 234446788998886 45555433
No 483
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.86 E-value=0.052 Score=48.88 Aligned_cols=76 Identities=21% Similarity=0.316 Sum_probs=50.3
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCC-hh-H------hhcCCcc--------cCHHHHhc--ccCEE
Q psy3240 40 LQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKK-PE-A------DKRGAEH--------TNIDDLCK--QSDFI 100 (274)
Q Consensus 40 L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~-~~-a------~~~g~~~--------~sl~ell~--~aDvV 100 (274)
+..++|.|.|. |.||+.+++.|...|.++++.+++... +. . ...++.. .++.++++ .+|+|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 34679999997 999999999999999988777765421 11 1 1233332 14566788 89999
Q ss_pred EEcCCCC--cccHHhcc
Q psy3240 101 IITSALT--PDTHHLIN 115 (274)
Q Consensus 101 il~lPlt--~~T~~li~ 115 (274)
+.+.... ..+..+++
T Consensus 88 i~~a~~~n~~~~~~l~~ 104 (346)
T 3i6i_A 88 VSTVGGESILDQIALVK 104 (346)
T ss_dssp EECCCGGGGGGHHHHHH
T ss_pred EECCchhhHHHHHHHHH
Confidence 9988752 23444543
No 484
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.85 E-value=0.014 Score=53.19 Aligned_cols=89 Identities=16% Similarity=0.166 Sum_probs=60.0
Q ss_pred CCCEEEEEccC-hHHHHHHHHHccC-CCeEEEEeCCCCChh-HhhcCCccc------C----HHHHh--cccCEEEEcCC
Q psy3240 41 QNSTVGIVGCG-RIGLSVLEKLIPY-KVSKFLYTSRSKKPE-ADKRGAEHT------N----IDDLC--KQSDFIIITSA 105 (274)
Q Consensus 41 ~gktVGIIGlG-~IG~~iA~~L~~~-G~~vv~~~~r~~~~~-a~~~g~~~~------s----l~ell--~~aDvVil~lP 105 (274)
.|++|.|+|.| .||..+++.++.. |+++++.+.+..+.+ +.+.|+... + +.++. ...|+|+.++.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 249 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN 249 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECCC
Confidence 58999999999 9999999999998 997776665443333 445555321 2 22333 25799988776
Q ss_pred CCcccHHhccHHHHhcCCCCcEEEEcCCC
Q psy3240 106 LTPDTHHLINRARLESMKPGAILINTSRG 134 (274)
Q Consensus 106 lt~~T~~li~~~~l~~mk~gailINv~RG 134 (274)
.... + ...++.++++..++.++..
T Consensus 250 ~~~~----~-~~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 250 SEKT----L-SVYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp CHHH----H-TTGGGGEEEEEEEEECCSS
T ss_pred CHHH----H-HHHHHHHhcCCEEEEECCC
Confidence 3211 1 2346677888888888753
No 485
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=94.85 E-value=0.049 Score=47.68 Aligned_cols=41 Identities=17% Similarity=0.228 Sum_probs=31.1
Q ss_pred CCCCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCC
Q psy3240 37 GPALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKK 77 (274)
Q Consensus 37 g~~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~ 77 (274)
..++.||++.|.|. |.||+++|+.|...|+++++.+++..+
T Consensus 22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 63 (260)
T 3gem_A 22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHA 63 (260)
T ss_dssp -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHH
Confidence 36799999999985 899999999999999988777766543
No 486
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.85 E-value=0.054 Score=52.76 Aligned_cols=87 Identities=16% Similarity=0.164 Sum_probs=58.9
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhc----CCc-ccCHHH-HhcccCEEEEcCCCCcccHHhcc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKR----GAE-HTNIDD-LCKQSDFIIITSALTPDTHHLIN 115 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~----g~~-~~sl~e-ll~~aDvVil~lPlt~~T~~li~ 115 (274)
.+++.|+|+|.+|+.+|+.|...|..+++.+........... ... ...|++ -++++|.++++++.. ..+++-
T Consensus 348 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d--~~ni~~ 425 (565)
T 4gx0_A 348 DELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDD--STNIFL 425 (565)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCH--HHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCc--hHHHHH
Confidence 388999999999999999999999988888876654331110 011 112333 368899999999864 344554
Q ss_pred HHHHhcCCCCcEEEE
Q psy3240 116 RARLESMKPGAILIN 130 (274)
Q Consensus 116 ~~~l~~mk~gailIN 130 (274)
....+.+.+...+|-
T Consensus 426 ~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 426 TLACRHLHSHIRIVA 440 (565)
T ss_dssp HHHHHHHCSSSEEEE
T ss_pred HHHHHHHCCCCEEEE
Confidence 556666677644433
No 487
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=94.84 E-value=0.081 Score=51.54 Aligned_cols=112 Identities=11% Similarity=0.067 Sum_probs=72.2
Q ss_pred CCCCEEEEEccChHHHH-HHHHHccCCCeEEEEeCCCCChh---HhhcCCccc---CHHHHhcccCEEEEc--CCCC-cc
Q psy3240 40 LQNSTVGIVGCGRIGLS-VLEKLIPYKVSKFLYTSRSKKPE---ADKRGAEHT---NIDDLCKQSDFIIIT--SALT-PD 109 (274)
Q Consensus 40 L~gktVGIIGlG~IG~~-iA~~L~~~G~~vv~~~~r~~~~~---a~~~g~~~~---sl~ell~~aDvVil~--lPlt-~~ 109 (274)
.++++|-|||.|.+|.+ +|+.|+..|+++.++|.+...+. ..+.|+... +.+++...+|+|+.. +|.+ |.
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHH
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHH
Confidence 56899999999999997 79999999998888887654322 345677543 445565679999885 3322 22
Q ss_pred cHH-------hccH-HHHhc-C-CCC-cEEEEcCCCchhcHHHHHhhhhhhhh
Q psy3240 110 THH-------LINR-ARLES-M-KPG-AILINTSRGQLVDQEALIDFIADIRV 151 (274)
Q Consensus 110 T~~-------li~~-~~l~~-m-k~g-ailINv~RG~iVde~aL~~~L~~~~i 151 (274)
... ++.+ +++.. + ++. .+-|--+-|+.--..-+...|+..|.
T Consensus 97 l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G~ 149 (524)
T 3hn7_A 97 IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAGI 149 (524)
T ss_dssp HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 211 2222 34443 3 332 34455556888888877788887765
No 488
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=94.81 E-value=0.031 Score=50.35 Aligned_cols=84 Identities=14% Similarity=0.114 Sum_probs=60.0
Q ss_pred EEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc-CHHHH----h-----cccCEEEEcCCCCcccH
Q psy3240 44 TVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT-NIDDL----C-----KQSDFIIITSALTPDTH 111 (274)
Q Consensus 44 tVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~-sl~el----l-----~~aDvVil~lPlt~~T~ 111 (274)
+|.|+|. |.+|...++.++..|+++++.+++..+.+ +++.|+..+ +..+. + ...|+|+-++.. + +
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~-~-~- 229 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG-K-Q- 229 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT-H-H-
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcH-H-H-
Confidence 7999998 99999999999999998777776655555 566776532 32221 1 246888888753 2 1
Q ss_pred HhccHHHHhcCCCCcEEEEcCC
Q psy3240 112 HLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~R 133 (274)
-...++.++++..++.++.
T Consensus 230 ---~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 230 ---LASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp ---HHHHHTTEEEEEEEEECCC
T ss_pred ---HHHHHHhhcCCCEEEEEec
Confidence 2456777888888888864
No 489
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=94.80 E-value=0.009 Score=53.75 Aligned_cols=63 Identities=22% Similarity=0.313 Sum_probs=40.8
Q ss_pred CCEEEEEcc-ChHHHHHHHHHc-cCCCeEEEEeCCCCCh----h-Hh-----hcCCcc-cCHHHHhcccCEEEEcC
Q psy3240 42 NSTVGIVGC-GRIGLSVLEKLI-PYKVSKFLYTSRSKKP----E-AD-----KRGAEH-TNIDDLCKQSDFIIITS 104 (274)
Q Consensus 42 gktVGIIGl-G~IG~~iA~~L~-~~G~~vv~~~~r~~~~----~-a~-----~~g~~~-~sl~ell~~aDvVil~l 104 (274)
..+|+|+|+ |.||+.+++.+. .-|++++...++.... . .. ..++.. .++++++..+|+|+-+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft 80 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT 80 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcC
Confidence 358999998 999999999876 4567655444443321 0 11 112222 36788888999999444
No 490
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=94.79 E-value=0.13 Score=45.22 Aligned_cols=97 Identities=14% Similarity=0.216 Sum_probs=61.6
Q ss_pred CCCCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh---H---hhcCCc-------cc---CHHHHhc----
Q psy3240 37 GPALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE---A---DKRGAE-------HT---NIDDLCK---- 95 (274)
Q Consensus 37 g~~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~---a---~~~g~~-------~~---sl~ell~---- 95 (274)
..+++||++.|.|. |-||+++|+.|...|+++++.+.+..... . ...+.. .. +++++++
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 35799999999995 78999999999999998777666543211 1 111211 11 2333443
Q ss_pred ---ccCEEEEcCCCCcc------c----HHh----------ccHHHHhcCCCCcEEEEcCC
Q psy3240 96 ---QSDFIIITSALTPD------T----HHL----------INRARLESMKPGAILINTSR 133 (274)
Q Consensus 96 ---~aDvVil~lPlt~~------T----~~l----------i~~~~l~~mk~gailINv~R 133 (274)
..|+++.+.-.... + ..+ +-+..++.|+++..+||+++
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 67999987643211 1 111 12345677888888999876
No 491
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=94.77 E-value=0.086 Score=46.07 Aligned_cols=68 Identities=9% Similarity=0.134 Sum_probs=45.0
Q ss_pred CCCCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh---HhhcCCcc-cCHHHHhc-------ccCEEEEcCCC
Q psy3240 39 ALQNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE---ADKRGAEH-TNIDDLCK-------QSDFIIITSAL 106 (274)
Q Consensus 39 ~L~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~---a~~~g~~~-~sl~ell~-------~aDvVil~lPl 106 (274)
++.||++.|.| .|.||+.+|+.|...|+++++.+++..... .....+.. .+++++++ ..|+|+.+.-.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~ 84 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI 84 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 58899999998 489999999999999998777766543211 11111111 12333443 58999987653
No 492
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.76 E-value=0.036 Score=50.53 Aligned_cols=95 Identities=19% Similarity=0.185 Sum_probs=64.0
Q ss_pred CCCEEEEEc-cChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc----CHHHHh------cccCEEEEcCCCCc
Q psy3240 41 QNSTVGIVG-CGRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT----NIDDLC------KQSDFIIITSALTP 108 (274)
Q Consensus 41 ~gktVGIIG-lG~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~----sl~ell------~~aDvVil~lPlt~ 108 (274)
.|++|.|+| .|.||..+++.++..|+++++. .+..+.+ +++.|+... ++.+.+ ...|+|+-++.. +
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vid~~g~-~ 227 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGG-P 227 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEEESSCT-H
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEEECCCc-H
Confidence 589999999 7999999999999999976665 3333333 555665432 333322 258999998763 1
Q ss_pred ccHHhccHHHHhcCCCCcEEEEcCCCchhcHHHH
Q psy3240 109 DTHHLINRARLESMKPGAILINTSRGQLVDQEAL 142 (274)
Q Consensus 109 ~T~~li~~~~l~~mk~gailINv~RG~iVde~aL 142 (274)
.-...++.|+++..++.++.....+...+
T Consensus 228 -----~~~~~~~~l~~~G~iv~~g~~~~~~~~~~ 256 (343)
T 3gaz_A 228 -----VLDASFSAVKRFGHVVSCLGWGTHKLAPL 256 (343)
T ss_dssp -----HHHHHHHHEEEEEEEEESCCCSCCCCHHH
T ss_pred -----HHHHHHHHHhcCCeEEEEcccCccccchh
Confidence 12356677889999998876544444333
No 493
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.75 E-value=0.031 Score=50.31 Aligned_cols=84 Identities=13% Similarity=0.116 Sum_probs=58.1
Q ss_pred EEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-HhhcCCccc----CH-HHHh-----cccCEEEEcCCCCcccH
Q psy3240 44 TVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-ADKRGAEHT----NI-DDLC-----KQSDFIIITSALTPDTH 111 (274)
Q Consensus 44 tVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-a~~~g~~~~----sl-~ell-----~~aDvVil~lPlt~~T~ 111 (274)
+|.|+|. |.+|...++.++..|+++++.+++..+.+ +++.|+... +. .+.+ ...|+|+-++.. +.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~-~~-- 228 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG-RT-- 228 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT-TT--
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH-HH--
Confidence 7999998 99999999999999998777776655555 666776432 11 1111 246888887764 21
Q ss_pred HhccHHHHhcCCCCcEEEEcCC
Q psy3240 112 HLINRARLESMKPGAILINTSR 133 (274)
Q Consensus 112 ~li~~~~l~~mk~gailINv~R 133 (274)
-...++.++++..++.++.
T Consensus 229 ---~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 229 ---LATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp ---HHHHHHTEEEEEEEEECSC
T ss_pred ---HHHHHHhhccCCEEEEEee
Confidence 2356777888888888764
No 494
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.74 E-value=0.056 Score=47.39 Aligned_cols=74 Identities=24% Similarity=0.343 Sum_probs=50.1
Q ss_pred CCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCC---hh-H------hhcCCcc--------cCHHHHhcccCEEEE
Q psy3240 42 NSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKK---PE-A------DKRGAEH--------TNIDDLCKQSDFIII 102 (274)
Q Consensus 42 gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~---~~-a------~~~g~~~--------~sl~ell~~aDvVil 102 (274)
.++|.|.|. |.+|+.+++.|...|.++++.+++... +. . ...++.. .++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 478999996 999999999999999877776655332 11 1 1234432 145667889999999
Q ss_pred cCCCC--cccHHhcc
Q psy3240 103 TSALT--PDTHHLIN 115 (274)
Q Consensus 103 ~lPlt--~~T~~li~ 115 (274)
+.+.. ..+..+++
T Consensus 84 ~a~~~~~~~~~~l~~ 98 (308)
T 1qyc_A 84 TVGSLQIESQVNIIK 98 (308)
T ss_dssp CCCGGGSGGGHHHHH
T ss_pred CCcchhhhhHHHHHH
Confidence 88653 23445543
No 495
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.74 E-value=0.15 Score=49.63 Aligned_cols=97 Identities=18% Similarity=0.308 Sum_probs=55.7
Q ss_pred CEEEEEccChHHHHHHHHHcc-CCC---eEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccH-HhccHH
Q psy3240 43 STVGIVGCGRIGLSVLEKLIP-YKV---SKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTH-HLINRA 117 (274)
Q Consensus 43 ktVGIIGlG~IG~~iA~~L~~-~G~---~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~-~li~~~ 117 (274)
++|.|||+|.||+.+|+.+.. .++ ++++.++..... ++.+... ..++. ...++... ..+
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~----------~~~~~~g-~~~~~--~~Vdadnv~~~l--- 77 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV----------DVAQQYG-VSFKL--QQITPQNYLEVI--- 77 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC----------CHHHHHT-CEEEE--CCCCTTTHHHHT---
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhh----------hHHhhcC-CceeE--EeccchhHHHHH---
Confidence 459999999999999999864 444 456665433221 2222222 22322 23333321 111
Q ss_pred HHhcCCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhc
Q psy3240 118 RLESMKPGAILINTSRGQLVDQEALIDFIADIRVISISMVT 158 (274)
Q Consensus 118 ~l~~mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~ 158 (274)
-+.++++-++||++ .....-+++++..+.|+.++|+..
T Consensus 78 -~aLl~~~DvVIN~s--~~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 78 -GSTLEENDFLIDVS--IGISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp -GGGCCTTCEEEECC--SSSCHHHHHHHHHHHTCEEEESSC
T ss_pred -HHHhcCCCEEEECC--ccccCHHHHHHHHHcCCCEEECCC
Confidence 12345557888866 233556777777778888888664
No 496
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=94.74 E-value=0.13 Score=45.71 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=61.2
Q ss_pred CCCCCCEEEEEcc-ChHHHHHHHHHccCCCeEEEEeCCCCChh-------HhhcCC-------cccC---HHHHh-----
Q psy3240 38 PALQNSTVGIVGC-GRIGLSVLEKLIPYKVSKFLYTSRSKKPE-------ADKRGA-------EHTN---IDDLC----- 94 (274)
Q Consensus 38 ~~L~gktVGIIGl-G~IG~~iA~~L~~~G~~vv~~~~r~~~~~-------a~~~g~-------~~~s---l~ell----- 94 (274)
.+++||++.|.|. |-||+++|+.|...|+++++.+.+..... ....+. ...+ .++++
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 5789999999985 89999999999999997766654422111 011121 1112 22233
Q ss_pred --cccCEEEEcCCCCcc-------c----HHh----------ccHHHHhcCCCCcEEEEcCCCc
Q psy3240 95 --KQSDFIIITSALTPD-------T----HHL----------INRARLESMKPGAILINTSRGQ 135 (274)
Q Consensus 95 --~~aDvVil~lPlt~~-------T----~~l----------i~~~~l~~mk~gailINv~RG~ 135 (274)
...|+++.+.-.... + ..+ +.+..++.|+++..|||+++..
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~ 188 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGG
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChh
Confidence 367999987653211 1 111 1234567888888999998754
No 497
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=94.72 E-value=0.074 Score=46.66 Aligned_cols=64 Identities=20% Similarity=0.163 Sum_probs=46.6
Q ss_pred CCEEEEEcc-ChHHHHHHHHHccCC-CeEEEEeCCCCChh---HhhcCCcc--------cCHHHHhcccCEEEEcCC
Q psy3240 42 NSTVGIVGC-GRIGLSVLEKLIPYK-VSKFLYTSRSKKPE---ADKRGAEH--------TNIDDLCKQSDFIIITSA 105 (274)
Q Consensus 42 gktVGIIGl-G~IG~~iA~~L~~~G-~~vv~~~~r~~~~~---a~~~g~~~--------~sl~ell~~aDvVil~lP 105 (274)
.++|.|.|. |.||+.+++.|...| .++++.+++..+.. ....++.. .++.++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999997 999999999998888 87777776654432 12234432 145667889999998875
No 498
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=94.71 E-value=0.16 Score=44.89 Aligned_cols=50 Identities=14% Similarity=0.312 Sum_probs=35.0
Q ss_pred CEEEEEcc-ChHHHHHHHHHccC-CCeEEEEeCCCCChhHhhcCCcccCHHHHhc-ccCEEEEcC
Q psy3240 43 STVGIVGC-GRIGLSVLEKLIPY-KVSKFLYTSRSKKPEADKRGAEHTNIDDLCK-QSDFIIITS 104 (274)
Q Consensus 43 ktVGIIGl-G~IG~~iA~~L~~~-G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~-~aDvVil~l 104 (274)
.+|+|+|+ |.||+.+++.+... +++++...++.. ++++++. .+|+|+-+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~------------dl~~~~~~~~DvvIDfT 53 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD------------PLSLLTDGNTEVVIDFT 53 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC------------CTHHHHHTTCCEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC------------CHHHHhccCCcEEEEcc
Confidence 37999996 99999999998755 887766655432 3444443 567777444
No 499
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=94.71 E-value=0.045 Score=51.41 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=72.7
Q ss_pred CCEEEEEccChHHHHHHHHHccCCCeEEEEeCCCCChhHhhcCCcccCHHHHhcccCEEEEcCCCCcccHHhccHHHHhc
Q psy3240 42 NSTVGIVGCGRIGLSVLEKLIPYKVSKFLYTSRSKKPEADKRGAEHTNIDDLCKQSDFIIITSALTPDTHHLINRARLES 121 (274)
Q Consensus 42 gktVGIIGlG~IG~~iA~~L~~~G~~vv~~~~r~~~~~a~~~g~~~~sl~ell~~aDvVil~lPlt~~T~~li~~~~l~~ 121 (274)
-.++.|+|.|.+|+++|+.++.+|++++++|+|..... .+-+..+|-++...| .+.+..
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~-----------~~~fp~a~~v~~~~p----------~~~~~~ 257 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCE-----------KHFFPDADEIIVDFP----------ADFLRK 257 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGC-----------GGGCTTCSEEEESCH----------HHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccc-----------cccCCCceEEecCCH----------HHHHhh
Confidence 35799999999999999999999999999998754211 112345665655433 122333
Q ss_pred --CCCCcEEEEcCCCchhcHHHHHhhhhhhhheeehhhccccc
Q psy3240 122 --MKPGAILINTSRGQLVDQEALIDFIADIRVISISMVTNEKH 162 (274)
Q Consensus 122 --mk~gailINv~RG~iVde~aL~~~L~~~~i~~~D~~~~~~~ 162 (274)
+.+++.+|=+.++.-.|...|...|+. ...||.+....++
T Consensus 258 ~~~~~~t~vvv~TH~h~~D~~~L~~aL~~-~~~YiG~iGSr~R 299 (362)
T 3on5_A 258 FLIRPDDFVLIMTHHFQKDQEILHFLLEK-ELRYIGILGSKER 299 (362)
T ss_dssp SCCCTTCEEEECCSCHHHHHHHHHHHSSS-CCSEEEESSCHHH
T ss_pred cCCCCCeEEEEEeCCchhhHHHHHHHhcC-CCCEEEEeCCHHH
Confidence 678899999999998999999988865 6777777775544
No 500
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.70 E-value=0.037 Score=50.44 Aligned_cols=38 Identities=26% Similarity=0.434 Sum_probs=31.2
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHccCCCeE-EEEeCCC
Q psy3240 38 PALQNSTVGIVGCGRIGLSVLEKLIPYKVSK-FLYTSRS 75 (274)
Q Consensus 38 ~~L~gktVGIIGlG~IG~~iA~~L~~~G~~v-v~~~~r~ 75 (274)
..|++++|.|||+|.+|..+|+.|...|... .++|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 5689999999999999999999999888754 4455433
Done!